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Sample records for ligand hydroxo complexes

  1. Assembly and properties of heterobimetallic Co(II/III)/Ca(II) complexes with aquo and hydroxo ligands.

    PubMed

    Lacy, David C; Park, Young Jun; Ziller, Joseph W; Yano, Junko; Borovik, A S

    2012-10-24

    The use of water as a reagent in redox-driven reactions is advantageous because it is abundant and environmentally compatible. The conversion of water to dioxygen in photosynthesis illustrates one example, in which a redox-inactive Ca(II) ion and four manganese ions are required for function. In this report we describe the stepwise formation of two new heterobimetallic complexes containing Co(II/III) and Ca(II) ions and either hydroxo or aquo ligands. The preparation of a four-coordinate Co(II) synthon was achieved with the tripodal ligand, N,N',N"-[2,2',2"-nitrilotris(ethane-2,1-diyl)]tris(2,4,6-trimethylbenzenesulfonamido, [MST](3-). Water binds to [Co(II)MST](-) to form the five-coordinate [Co(II)MST(OH(2))](-) complex that was used to prepare the Co(II)/Ca(II) complex [Co(II)MST(μ-OH(2))Ca(II)⊂15-crown-5(OH(2))](+) ([Co(II)(μ-OH(2))Ca(II)OH(2)](+)). [Co(II)(μ-OH(2))CaOH(2)](+) contained two aquo ligands, one bonded to the Ca(II) ion and one bridging between the two metal ions, and thus represents an unusual example of a heterobimetallic complex containing two aquo ligands spanning different metal ions. Both aquo ligands formed intramolecular hydrogen bonds with the [MST](3-) ligand. [Co(II)MST(OH(2))](-) was oxidized to form [Co(III)MST(OH(2))] that was further converted to [Co(III)MST(μ-OH)Ca(II)⊂15-crown-5](+) ([Co(III)(μ-OH)Ca(II)](+)) in the presence of base and Ca(II)OTf(2)/15-crown-5. [Co(III)(μ-OH)Ca(II)](+) was also synthesized from the oxidation of [Co(II)MST](-) with iodosylbenzene (PhIO) in the presence of Ca(II)OTf(2)/15-crown-5. Allowing [Co(III)(μ-OH)Ca(II)](+) to react with diphenylhydrazine afforded [Co(II)(μ-OH(2))Ca(II)OH(2)](+) and azobenzene. Additionally, the characterization of [Co(III)(μ-OH)Ca(II)](+) provides another formulation for the previously reported Co(IV)-oxo complex, [(TMG(3)tren)Co(IV)(μ-O)Sc(III)(OTf)(3)](2+) to one that instead could contain a Co(III)-OH unit.

  2. Unique stability of μ-hydroxo ligands in Pt(IV) complexes towards alkaline hydrolysis

    NASA Astrophysics Data System (ADS)

    Beck, I. E.; Kriventsov, V. V.; Fedotov, M. A.; Bukhtiyarov, V. I.

    2009-05-01

    Pt(IV)-nitrate solutions are widely used as precursors for mobile and stationary emission control catalysts for being chlorine-free but are unfit for the preparation of highly dispersed catalysts due to hydrolysis taking place after dilution and/or interaction with a basic carrier surface. The alkalization of the commercial Pt(IV)-nitrate solutions was found not to lead to light-yellow mononuclear [Pt(OH) 6] 2- solution because the bridged OH ligands stabilizing oligomeric Pt nitrate complexes are not cleaved even after refluxing with excess of alkali. The alkalization results in dilution-resistant polynuclear precursor solutions fit for highly dispersed Pt/Al 2O 3 catalyst preparation.

  3. Synthesis, characterization, and solution properties of a novel cross-bridged cyclam manganese(IV) complex having two terminal hydroxo ligands.

    PubMed

    Yin, Guochuan; McCormick, James M; Buchalova, Maria; Danby, Andrew M; Rodgers, Kent; Day, Victor W; Smith, Kevyn; Perkins, Chris M; Kitko, David; Carter, John D; Scheper, William M; Busch, Daryle H

    2006-10-02

    A novel monomeric tetravalent manganese complex with the cross-bridged cyclam ligand 4,11-dimethyl-1,4,8,11-tetraazabicyclo[6.6.2]hexadecane (Me2EBC), [Mn(IV)(Me2EBC)(OH)2](PF6)2, was synthesized by oxidation of Mn(II)(Me2EBC)Cl2 with H2O2 in the presence of NH4PF6)in aqueous solution. The X-ray crystal structure determination of this manganese(IV) compound revealed that it contains two rare terminal hydroxo ligands. EPR studies in dry acetonitrile at 77 K show two broad resonances at g = 1.96 and 3.41, indicating that the manganese(IV) exists as a high-spin d3 species. Resonance Raman (rR) spectra of this manganese(IV) species reveal that the dihydroxy moiety, Mn(IV)(OH)2, is also the dominant species in aqueous solution (pH < 7). pH titration provides two pK(a) values, 6.86(4) and 10.0(1), associated with stepwise removal of the last two oxygen-bound protons from [Mn(IV)(Me2EBC)(OH)2](2+). The cyclic voltammetry of this manganese(IV) complex in dry acetonitrile at 298 K demonstrates two reversible redox processes at +0.756 and -0.696 V (versus SHE) for the Mn4+/Mn3+ and Mn3+/Mn2+ couples, respectively. This manganese(IV) complex is relatively stable in weak acidic aqueous solution but easily degrades in basic solution to manganese(III) derivatives with an 88 +/- 1% yield.

  4. Oxidative reactivity difference among the metal oxo and metal hydroxo moieties: pH dependent hydrogen abstraction by a manganese(IV) complex having two hydroxide ligands.

    PubMed

    Yin, Guochuan; Danby, Andrew M; Kitko, David; Carter, John D; Scheper, William M; Busch, Daryle H

    2008-12-03

    Clarifying the difference in redox reactivity between the metal oxo and metal hydroxo moieties for the same redox active metal ion in identical structures and oxidation states, that is, M(n+)O and M(n+)-OH, contributes to the understanding of nature's choice between them (M(n+)O or M(n+)-OH) as key active intermediates in redox enzymes and electron transfer enzymes, and provides a basis for the design of synthetic oxidation catalysts. The newly synthesized manganese(IV) complex having two hydroxide ligands, [Mn(Me(2)EBC)(2)(OH)(2)](PF(6))(2), serves as the prototypic example to address this issue, by investigating the difference in the hydrogen abstracting abilities of the Mn(IV)O and Mn(IV)-OH functional groups. Independent thermodynamic evaluations of the O-H bond dissociation energies (BDE(OH)) for the corresponding reduction products, Mn(III)-OH and Mn(III)-OH(2), reveal very similar oxidizing power for Mn(IV)O and Mn(IV)-OH (83 vs 84.3 kcal/mol). Experimental tests showed that hydrogen abstraction proceeds at reasonable rates for substrates having BDE(CH) values less than 82 kcal/mol. That is, no detectable reaction occurred with diphenyl methane (BDE(CH) = 82 kcal/mol) for both manganese(IV) species. However, kinetic measurements for hydrogen abstraction showed that at pH 13.4, the dominant species Mn(Me(2)EBC)(2)(O)(2), having only Mn(IV)O groups, reacts more than 40 times faster than the Mn(IV)-OH unit in Mn(Me(2)EBC)(2)(OH)(2)(2+), the dominant reactant at pH 4.0. The activation parameters for hydrogen abstraction from 9,10-dihydroanthracene were determined for both manganese(IV) moieties: over the temperature range 288-318 K for Mn(IV)(OH)(2)(2+), DeltaH(double dagger) = 13.1 +/- 0.7 kcal/mol, and DeltaS(double dagger) = -35.0 +/- 2.2 cal K(-1) mol(-1); and the temperature range 288-308 K for for Mn(IV)(O)(2), DeltaH(double dagger) = 12.1 +/- 1.8 kcal/mol, and DeltaS(double dagger) = -30.3 +/- 5.9 cal K(-1) mol(-1).

  5. Phosphate ester hydrolysis by hydroxo complexes of trivalent lanthanides stabilized by 4-imidazolecarboxylate.

    PubMed

    Aguilar-Pérez, Francisco; Gómez-Tagle, Paola; Collado-Fregoso, Elisa; Yatsimirsky, Anatoly K

    2006-11-13

    The anion of 4-imidazolecarboxylic acid (HL) stabilizes hydroxo complexes of trivalent lanthanides of the type ML(OH)+ (M = La, Pr) and M2L(n)(OH)(6-n) (M = La, n = 2; M = Pr, n = 2, 3; M = Nd, Eu, Dy, n = 1-3). Compositions and stability constants of the complexes have been determined by potentiometric titrations. Spectrophotometric and (1)H NMR titrations with Nd(III) support the reaction model for the formation of hydroxo complexes proposed on the basis of potentiometric results. Kinetics of the hydrolysis of two phosphate diesters, bis(4-nitrophenyl) phosphate (BNPP) and 2-hydroxypropyl 4-nitrophenyl phosphate (HPNPP), and a triester, 4-nitrophenyl diphenyl phosphate (NPDPP), in the presence of hydroxo complexes of five lanthanides were studied as a function of pH and metal and ligand concentrations. With all lanthanides and all substrates, complexes with the smallest n, that is M2L2(OH)4 for La and Pr and M2L(OH)5 for Nd, Eu, and Dy, exhibited the highest catalytic activity. Strong inhibitory effects by simple anions (Cl-, NO3-, (EtO)2PO2-, AcO-) were observed indicating high affinity of neutral hydroxo complexes toward anionic species. The catalytic activity decreased in the order La > Pr > Nd > Eu > Dy for both diester substrates and was practically independent of the nature of cation for a triester substrate. The efficiency of catalysis, expressed as the ratio of the second-order rate constant for the ester cleavage by the hydroxo complex to the second-order rate constant for the alkaline hydrolysis of the respective substrate, varied from ca. 1 for NPDPP to 10(2) for HPNPP and to 10(5) for BNPP. The proposed mechanism of catalytic hydrolysis involves reversible bridging complexation of a phosphodiester to the binuclear active species followed by attack on the phosphoryl group by bridging hydroxide (BNPP) or by the alkoxide group of the deprotonated substrate (HPNPP).

  6. The role of hydroxo-bridged dinuclear species and the influence of "innocent" buffers in the reactivity of cis-[Co(III)(cyclen)(H₂O)₂]³⁺ and [Co(III)(tren)(H₂O)₂]³⁺ complexes with biologically relevant ligands at physiological pH.

    PubMed

    Basallote, Manuel G; Martínez, Manuel; Vázquez, Marta

    2014-07-28

    In view of the relevance of the reactivity of inert tetraamine Co(III) complexes having two substitutionally active cis positions capable of interact with biologically relevant ligands, the study of the reaction of cis-[Co(cyclen)(H2O)2](3+) and [Co(tren)(H2O)2](3+) with chlorides, inorganic phosphate and 5'-CMP (5'-cytidinemonophosphate) has been pursued at physiological pH. The results indicate that, in addition to the actuation of the expected labilising conjugate-base mechanism, the formation of mono and inert bis hydroxo-bridged species is relevant for understanding their speciation and reactivity. The reactivity pattern observed also indicates the key role played by the "innocent" buffers frequently used in most in vitro studies, which can make the results unreliable in many cases. The differences between the reactivity of inorganic and biologically relevant phosphates has also been found to be remarkable, with outer-sphere hydrogen bonding interactions being a dominant factor for the process. While for the inorganic phosphate substitution process the formation of μ-η(2)-OPO2O represents the termination of the reactivity monitored, for 5'-CMP only the formation of η(1)-OPO3 species is observed, which evolve with time to the final dead-end bis hydroxo-bridged complexes. The promoted hydrolysis of the 5'-CMP phosphate has not been observed in any of the processes studied.

  7. Niobium in hydrothermal systems related to alkali granites: Thermodynamic description of hydroxo and hydroxofluoride complexes

    NASA Astrophysics Data System (ADS)

    Lukyanova, E. V.; Akinfiev, N. N.; Zotov, A. V.; Rass, I. T.; Kotova, N. P.; Korzhinskaya, V. S.

    2017-07-01

    Available experimental data on the solubility of Nb2O5 and the stability constants for particles of an aqueous solution in the Nb-O-H-F system were processed. As a result, a set of thermodynamic properties for 25°C and 1 bar was obtained, in addition to the equation parameters for the HKF model (Helgeson-Kirkham-Flowers) for hydroxo and hydroxofluoride niobium complexes. F- ion is the most important factor governing the concentration of dissolved Nb: neutral hydroxo complex Nb(OH)5(aq) is formed at a low HF concentration, whereas an increase in HF results in an increase in the first Nb(OH)4F(aq) and second Nb(OH)3F2(aq) fluoride complexes. The Nb(OH)5F- oxofluoride anion determines oxide solubility in alkali F-bearing fluids. Neutralization of acidic fluoride solution can be the main factor leading to niobium deposition.

  8. Steric and Electronic Influence on Proton-Coupled Electron-Transfer Reactivity of a Mononuclear Mn(III)-Hydroxo Complex.

    PubMed

    Rice, Derek B; Wijeratne, Gayan B; Burr, Andrew D; Parham, Joshua D; Day, Victor W; Jackson, Timothy A

    2016-08-15

    A mononuclear hydroxomanganese(III) complex was synthesized utilizing the N5 amide-containing ligand 2-[bis(pyridin-2-ylmethyl)]amino-N-2-methyl-quinolin-8-yl-acetamidate (dpaq(2Me) ). This complex is similar to previously reported [Mn(III)(OH)(dpaq(H))](+) [Inorg. Chem. 2014, 53, 7622-7634] but contains a methyl group adjacent to the hydroxo moiety. This α-methylquinoline group in [Mn(III)(OH)(dpaq(2Me))](+) gives rise to a 0.1 Å elongation in the Mn-N(quinoline) distance relative to [Mn(III)(OH)(dpaq(H))](+). Similar bond elongation is observed in the corresponding Mn(II) complex. In MeCN, [Mn(III)(OH)(dpaq(2Me))](+) reacts rapidly with 2,2',6,6'-tetramethylpiperidine-1-ol (TEMPOH) at -35 °C by a concerted proton-electron transfer (CPET) mechanism (second-order rate constant k2 of 3.9(3) M(-1) s(-1)). Using enthalpies and entropies of activation from variable-temperature studies of TEMPOH oxidation by [Mn(III)(OH)(dpaq(2Me))](+) (ΔH(‡) = 5.7(3) kcal(-1) M(-1); ΔS(‡) = -41(1) cal M(-1) K(-1)), it was determined that [Mn(III)(OH)(dpaq(2Me))](+) oxidizes TEMPOH ∼240 times faster than [Mn(III)(OH)(dpaq(H))](+). The [Mn(III)(OH)(dpaq(2Me))](+) complex is also capable of oxidizing the stronger O-H and C-H bonds of 2,4,6-tri-tert-butylphenol and xanthene, respectively. However, for these reactions [Mn(III)(OH)(dpaq(2Me))](+) displays, at best, modest rate enhancement relative to [Mn(III)(OH)(dpaq(H))](+). A combination of density function theory (DFT) and cyclic voltammetry studies establish an increase in the Mn(III)/Mn(II) reduction potential of [Mn(III)(OH)(dpaq(2Me))](+) relative to [Mn(III)(OH)(dpaq(H))](+), which gives rise to a larger driving force for CPET for the former complex. Thus, more favorable thermodynamics for [Mn(III)(OH)(dpaq(2Me))](+) can account for the dramatic increase in rate with TEMPOH. For the more sterically encumbered substrates, DFT computations suggest that this effect is mitigated by unfavorable steric interactions between the

  9. Isolation and characterization of a new type of mu-hydroxo-bis-Zn(salphen) assembly.

    PubMed

    Anselmo, Daniele; Escudero-Adán, Eduardo C; Benet-Buchholz, Jordi; Kleij, Arjan W

    2010-10-07

    A series of assemblies comprising hydroxo-bridged dinuclear Zn(salphen) structures have been isolated and fully characterized in solution and by X-ray crystallography. The solution stability of these assembled species was evaluated in polar media, in the presence of excess of building blocks and competing ligands. The catalytic potential of this type of complex was investigated in phosphoester cleavage reactions.

  10. Reactivity of a rhenium hydroxo-carbonyl complex toward carbon disulfide: insights from theory.

    PubMed

    Yeguas, Violeta; Campomanes, Pablo; López, Ramón

    2010-01-21

    The reaction mechanism on the formation of the hydrosulfido complex [Re(SH)(CO)(3)(bipy)] via the reaction of [Re(OH)(CO)(3)(bipy)] with carbon disulfide was theoretically investigated at the B3LYP/6-31+G(d,p) (LANL2DZ+f for Re) level of theory taking into account bulk solvent effects by using the PCM-UAHF continuum model. The energetics of the process was also analyzed by means of single-point energy calculations by replacing the B3LYP functional by the B3PW91, M05, TPSS and TPSSh ones. The most favored mechanistic routes obtained by us uncover all the molecular rearrangements involved in the reactive process, thus allowing the enriching of the experimental mechanistic proposal. Besides, our findings permit to explain the assignment of the solution color change to the formation of [Re(SH)(CO)(3)(bipy)] when mixed CS(2) with [Re(OH)(CO)(3)(bipy)]. Finally, based on our mechanistic study is also possible to rationalize the formation of [Re(SC(S)OCH(3))(CO)(3)(bipy)] when [Re(OCH(3))(CO)(3)(bipy)] reacts with CS(2) and of TpZn-OCH(3) when methanol is present in the reaction of TpZn-OH with CS(2).

  11. O2 activation by metal-ligand cooperation with Ir(I) PNP pincer complexes.

    PubMed

    Feller, Moran; Ben-Ari, Eyal; Diskin-Posner, Yael; Carmieli, Raanan; Weiner, Lev; Milstein, David

    2015-04-15

    A unique mode of molecular oxygen activation, involving metal-ligand cooperation, is described. Ir pincer complexes [((t)BuPNP)Ir(R)] (R = C6H5 (1), CH2COCH3 (2)) react with O2 to form the dearomatized hydroxo complexes [((t)BuPNP*)Ir(R)(OH)] ((t)BuPNP* = deprotonated (t)BuPNP ligand), in a process which utilizes both O-atoms. Experimental evidence, including NMR, EPR, and mass analyses, indicates a binuclear mechanism involving an O-atom transfer by a peroxo intermediate.

  12. Concerted proton-coupled electron transfers in aquo/hydroxo/oxo metal complexes: Electrochemistry of [OsII(bpy)2py(OH2)]2+ in water

    PubMed Central

    Costentin, Cyrille; Robert, Marc; Savéant, Jean-Michel; Teillout, Anne-Lucie

    2009-01-01

    Kinetic analysis of the successive oxidative cyclic voltammetric responses of [OsII(bpy)2py(OH2)]2+ in buffered water, together with determination of H/D isotope effects, has allowed the determination of the mechanisms of the successive proton-coupled electron transfers that convert the OsII-aquo complex into the OsIII-hydroxo complex and the later into the OsIV-oxo complex. The stepwise pathways prevail over the concerted pathway in the first case. However, very large concentrations of a base, such as acetate, trigger the beginning of a concerted reaction. The same trend appears, but to a much larger extent, when high local concentration of carboxylates are attached close to the Os complex. The OsIII-hydroxo/OsIV-oxo couple is globally much slower and concerted pathways predominate over the stepwise pathways. Water is, however, not an appropriate proton acceptor in this respect. Other bases, such as citrate or phosphate, are instead quite effective for triggering concerted pathways. Here, we suggest factors causing these contrasting behaviors, providing a practical illustration of the prediction that concerted processes are an efficient way of avoiding high-energy intermediates. Observation of a strong decelerating effect of inactive ions together with the positive role of high local concentrations of carboxylates to initiate a concerted route underscores the variety of structural and medium factors that may operate to modulate and control the occurrence of concerted pathways. These demonstrations and analyses of the occurrence of concerted pathways in an aquo–hydroxo–oxo series are expected to serve as guidelines for studies in term of methodology and factor analysis. PMID:19584254

  13. Synthesis, crystal structure and magnetic studies of tetranuclear hydroxo and ligand bridged [Co4(μ3-OH)2(μ2-dea)2(L-L)4]4Cl·8H2O [L-L = 2,2'-bipyridine or 1,10-phenanthroline] complexes with mixed valence defect dicubane core.

    PubMed

    Siddiqi, Zafar A; Siddique, Armeen; Shahid, M; Khalid, Mohd; Sharma, Prashant K; Anjuli; Ahmad, Musheer; Kumar, Sarvendra; Lan, Yanhua; Powell, Annie K

    2013-07-14

    X-ray crystallography of the title complexes indicates a discrete mixed valence (Co2(II)-Co2(III)) defect dicubane molecular unit where each cobalt nucleus attains a distorted octahedral geometry. The α-diimine (L-L) chelator coordinated to each cobalt ion stops further polymerization or nuclearization. The water molecules in the lattice play a crucial role in the formation of the supramolecular architectures. Magnetic data were analyzed using the effective spin-1/2 Hamiltonian approach and the parameters are, J = 115(6) K, ΔJ = -57.0(1.2) K, g(xy) = 3.001(25), and g(z) = 7.214(7) for 1 and J = 115(12) K, ΔJ = -58.5(2.5) K, g(xy) = 3.34(5), and g(z) = 6.599(12) for 2 suggesting that only the g matrices are prone to the change of α-diimine chelator.

  14. Preparation and structures of dinuclear complexes containing MII–OH centers†

    PubMed Central

    Ng, Gary K.-Y.; Ziller, Joseph W.

    2013-01-01

    The synthesis of MII2 complexes (MII = Co, Mn) with terminal hydroxo ligands has been achieved utilizing a dinucleating ligand containing a bridging pyrazolate unit and appended (neopentyl)aminopyridyl groups. Structurally studies on the complexes revealed that the MII–OH units are positioned in a syn-configuration, placing the hydroxo ligands in close proximity (ca. 3 Å apart), which may be a prerequisite for water oxidation. PMID:22288074

  15. Iron(II) Complexes Supported by Sulfonamido Tripodal Ligands: Endogenous versus Exogenous Substrate Oxidation

    PubMed Central

    2015-01-01

    High-valent iron species are known to act as powerful oxidants in both natural and synthetic systems. While biological enzymes have evolved to prevent self-oxidation by these highly reactive species, development of organic ligand frameworks that are capable of supporting a high-valent iron center remains a challenge in synthetic chemistry. We describe here the reactivity of an Fe(II) complex that is supported by a tripodal sulfonamide ligand with both dioxygen and an oxygen-atom transfer reagent, 4-methylmorpholine-N-oxide (NMO). An Fe(III)–hydroxide complex is obtained from reaction with dioxygen, while NMO gives an Fe(III)–alkoxide product resulting from activation of a C–H bond of the ligand. Inclusion of Ca2+ ions in the reaction with NMO prevented this ligand activation and resulted in isolation of an Fe(III)–hydroxide complex in which the Ca2+ ion is coordinated to the tripodal sulfonamide ligand and the hydroxo ligand. Modification of the ligand allowed the Fe(III)–hydroxide complex to be isolated from NMO in the absence of Ca2+ ions, and a C–H bond of an external substrate could be activated during the reaction. This study highlights the importance of robust ligand design in the development of synthetic catalysts that utilize a high-valent iron center. PMID:25264932

  16. Binuclear copper(II) oxidation products from copper(I) complexes with tridentate ligands. Magnetostructural characterization.

    PubMed

    Rojas, Darío; García, Ana M; Vega, Andrés; Moreno, Yanko; Venegas-Yazigi, Diego; Garland, María T; Manzur, Jorge

    2004-10-04

    The bis-pyridine tridentate ligands (6-R-2-pyridylmethyl)-(2-pyridylmethyl) benzylamine (RDPMA, where R = CH(3), CF(3)), (6-R-2-pyridylmethyl)-(2-pyridylethyl) benzylamine (RPMPEA, where R = CH(3), CF(3)), and the bidentate ligand di-benzyl-(6-methyl-2-pyridylmethyl)amine (BiBzMePMA) have been synthesized and their copper(I) complexes oxidized in a methanol solution to afford self-assembled bis-micro-methoxo-binuclear copper(II) complexes (1, 2, 4, 6) or hydroxo- binuclear copper(II) complexes (3). Oxidation of the nonsubstituted DPMA (R = H) in dichloromethane gives a chloride-bridged complex (5). The crystal structures for [Cu(MeDPMA)(MeO)](2)(ClO(4))(2) (1), [Cu(RPMPEA)(MeO)](2)(ClO(4))(2) (for 2, R= Me, and for 4, R = CF(3)), [Cu(BiBzMePMA)(MeO)](2)(ClO(4))(2) (6), [Cu(FDPMA)(OH)](2)(ClO(4))(2) (3), and [Cu(DPMA)(Cl)](2)(ClO(4))(2) (5) have been determined, and their variable-temperature magnetic susceptibility has been measured in the temperature range of 10-300 K. The copper coordination geometries are best described as square pyramidal, except for 6, which is square planar, because of the lack of one pyridine ring in the bidentate ligand. In 1-4 and 6, the basal plane is formed by two pyridine N atoms and two O atoms from the bridging methoxo or hydroxo groups, whereas in 5, the bridging Cl atoms occupy axial-equatorial sites. Magnetic susceptibility measurements show that the Cu atoms are strongly coupled antiferromagnetically in the bis-methoxo complexes 1, 2, 4, and 6, with -2J > 600 cm(-)(1), whereas for the hydroxo complex 3, -2J = 195 cm(-)(1) and the chloride-bridged complex 5 shows a weak ferromagnetic coupling, with 2J = 21 cm(-)(1) (2J is an indicator of the magnetic interaction between the Cu centers).

  17. Analysis of macromolecules, ligands and macromolecule-ligand complexes

    DOEpatents

    Von Dreele, Robert B [Los Alamos, NM

    2008-12-23

    A method for determining atomic level structures of macromolecule-ligand complexes through high-resolution powder diffraction analysis and a method for providing suitable microcrystalline powder for diffraction analysis are provided. In one embodiment, powder diffraction data is collected from samples of polycrystalline macromolecule and macromolecule-ligand complex and the refined structure of the macromolecule is used as an approximate model for a combined Rietveld and stereochemical restraint refinement of the macromolecule-ligand complex. A difference Fourier map is calculated and the ligand position and points of interaction between the atoms of the macromolecule and the atoms of the ligand can be deduced and visualized. A suitable polycrystalline sample of macromolecule-ligand complex can be produced by physically agitating a mixture of lyophilized macromolecule, ligand and a solvent.

  18. Magnetic exchange interaction in the μ-hydroxo bridged vanadium(IV) dimers: a density functional theory combined with broken-symmetry approach

    NASA Astrophysics Data System (ADS)

    Zhang, Lei; Chen, Zhida

    2001-09-01

    Magnetic exchange interaction for the μ-hydroxo bridged vanadium(IV) dimers is investigated based on calculations of density functional theory combined with the broken-symmetry approach. It is found that there is an exponential correlation between the V-O(hydroxo)-V angle, the V-O(hydroxo) distance and the exchange coupling constants J. Meanwhile, the calculated results reveal that the deprotonation of the bridging hydroxo ligand causes a sharp increase of the exchange coupling interaction, but the magnetic coupling constant J is insensitive to the deprotonation of the bridging aquo ligand. Moreover, simplifying each 1,2-bridging squarate ligand with two -OCH 2 groups almost does not influence magnetic exchange behavior between the two vanadium(IV) ions, and the principle of the shortest superexchange pathway is available for the multiplicity of the bridging ligand in the μ-hydroxo bridged vanadium(IV) dimers.

  19. Kinetics of phosphodiester cleavage by differently generated cerium(IV) hydroxo species in neutral solutions.

    PubMed

    Maldonado, Ana L; Yatsimirsky, Anatoly K

    2005-08-07

    Neutral aqueous solutions of cerium ammonium nitrate obtained by dilution of their acetonitrile stock solution with imidazole buffer show high catalytic activity in the hydrolysis of bis(p-nitrophenyl) phosphate (BNPP) and better reproducibility than other similar systems, but suffer from low stability. The kinetics of catalytic hydrolysis is second-order in Ce(IV), independent of pH in the range 5-8 and tentatively involves the Ce2(OH)7+ species as the active form. Attempts to stabilize the active species by different types of added ligands failed, but the use of Ce(IV) complexes pre-synthesized in an organic solvent with potentially stabilizing ligands as precursors of active hydroxo species appeared to be more successful. Three new Ce(IV) complexes, [Ce(Phen)2O(NO3)2], [Ce(tris)O(NO3)(OH)] and [Ce(BTP)2(NO3)4].2H2O (BTP = bis-tris propane, 1,3-bis[tris(hydroxymethyl)methylamino]propane), were prepared by reacting cerium ammonium nitrate with the respective ligands in acetonitrile and were characterized by analytical and spectroscopic techniques. Aqueous solutions of these complexes undergo rapid hydrolysis producing nearly neutral polynuclear Ce(IV) oxo/hydroxo species with high catalytic activity in BNPP hydrolysis. Potentiometric titrations of the solutions obtained from the complex with BTP revealed the formation of Ce4(OH)15+ species at pH > 7, which are protonated affording Ce4(OH)14(2+) and then Ce4(OH)13(3+) on a decrease in pH from 7 to 5. The catalytic activity increases strongly on going to species with a higher positive charge. The reaction mechanism involves first- and second-order in catalyst paths as well as intermediate complex formation with the substrate for higher charged species.

  20. X-Band Electron Paramagnetic Resonance Comparison of Mononuclear Mn(IV)-oxo and Mn(IV)-hydroxo Complexes and Quantum Chemical Investigation of Mn(IV) Zero-Field Splitting.

    PubMed

    Leto, Domenick F; Massie, Allyssa A; Colmer, Hannah E; Jackson, Timothy A

    2016-04-04

    X-band electron paramagnetic resonance (EPR) spectroscopy was used to probe the ground-state electronic structures of mononuclear Mn(IV) complexes [Mn(IV)(OH)2(Me2EBC)](2+) and [Mn(IV)(O)(OH)(Me2EBC)](+). These compounds are known to effect C-H bond oxidation reactions by a hydrogen-atom transfer mechanism. They provide an ideal system for comparing Mn(IV)-hydroxo versus Mn(IV)-oxo motifs, as they differ by only a proton. Simulations of 5 K EPR data, along with analysis of variable-temperature EPR signal intensities, allowed for the estimation of ground-state zero-field splitting (ZFS) and (55)Mn hyperfine parameters for both complexes. From this analysis, it was concluded that the Mn(IV)-oxo complex [Mn(IV)(O)(OH)(Me2EBC)](+) has an axial ZFS parameter D (D = +1.2(0.4) cm(-1)) and rhombicity (E/D = 0.22(1)) perturbed relative to the Mn(IV)-hydroxo analogue [Mn(IV)(OH)2(Me2EBC)](2+) (|D| = 0.75(0.25) cm(-1); E/D = 0.15(2)), although the complexes have similar (55)Mn values (a = 7.7 and 7.5 mT, respectively). The ZFS parameters for [Mn(IV)(OH)2(Me2EBC)](2+) were compared with values obtained previously through variable-temperature, variable-field magnetic circular dichroism (VTVH MCD) experiments. While the VTVH MCD analysis can provide a reasonable estimate of the magnitude of D, the E/D values were poorly defined. Using the ZFS parameters reported for these complexes and five other mononuclear Mn(IV) complexes, we employed coupled-perturbed density functional theory (CP-DFT) and complete active space self-consistent field (CASSCF) calculations with second-order n-electron valence-state perturbation theory (NEVPT2) correction, to compare the ability of these two quantum chemical methods for reproducing experimental ZFS parameters for Mn(IV) centers. The CP-DFT approach was found to provide reasonably acceptable values for D, whereas the CASSCF/NEVPT2 method fared worse, considerably overestimating the magnitude of D in several cases. Both methods were poor in

  1. Determination of formation constants of hydroxo and carbonate complexes of Pr(3+) in 2 M NaCl at 303 K.

    PubMed

    López-González, H; Jiménez-Reyes, M; Rojas-Hernández, A; Solache-Ríos, M

    1997-10-01

    The hydrolysis of praseodymium III in 2 M sodium chloride at 303 K was studied. Two methods were used: pH titration followed by a computational refinement and solvent extraction in the presence of a competitive ligand. The hydrolysis constants obtained by pH titration were: logbeta(1,H)=-7.68+/-0.07, logbeta(1,2H)=-15.10+/-0.03, and beta(1,3H)=-23.80+/-0.04. The stability constants of praseodymium carbonate complexes were determined by pH titration as well and were: logbeta(1,CO(2-)(3))=5.94+/-0.08 and logbeta(1,2CO(2-)(3))=11.15+/-0.15. Praseodymium carbonate species were taken into consideration for calculating the first hydrolysis constants by the solvent extraction method and the value obtained was: logbeta(1,H)=-7.69+/-0.27. The values for logbeta(1,H) attained by both methods are the same. The species-distribution diagram was obtained from the stability constants of praseodymium carbonate complexes and hydrolysis products in the conditions of the present work.

  2. Neodymium(III) complexation by amino-carbohydrates via a ligand-controlled hydrolysis mechanism.

    PubMed

    Levitskaia, Tatiana G; Chen, Yongsheng; Fulton, John L; Sinkov, Sergei I

    2011-07-28

    Chelation of Nd(3+) by D-glucosamine (DGA) and chitosan was investigated in solution at near-physiological pH and ionic strength. This research demonstrates the first example of the lanthanide ion heteroleptic hydroxo-carbohydrate complex in solution. Amino-carbohydrates DGA and chitosan suppressed formation of polynuclear Nd(3+) species at elevated pH.

  3. Crystallographic refinement of ligand complexes

    PubMed Central

    Kleywegt, Gerard J.

    2007-01-01

    Model building and refinement of complexes between biomacromolecules and small molecules requires sensible starting coordinates as well as the specification of restraint sets for all but the most common non-macromolecular entities. Here, it is described why this is necessary, how it can be accomplished and what pitfalls need to be avoided in order to produce chemically plausible models of the low-molecular-weight entities. A number of programs, servers, databases and other resources that can be of assistance in the process are also discussed. PMID:17164531

  4. Mn K-Edge X-ray Absorption Studies of Oxo- and Hydroxo-manganese(IV) Complexes: Experimental and Theoretical Insights into Pre-Edge Properties

    PubMed Central

    2015-01-01

    Mn K-edge X-ray absorption spectroscopy (XAS) was used to gain insights into the geometric and electronic structures of [MnII(Cl)2(Me2EBC)], [MnIV(OH)2(Me2EBC)]2+, and [MnIV(O)(OH)(Me2EBC)]+, which are all supported by the tetradentate, macrocyclic Me2EBC ligand (Me2EBC = 4,11-dimethyl-1,4,8,11-tetraazabicyclo[6.6.2]hexadecane). Analysis of extended X-ray absorption fine structure (EXAFS) data for [MnIV(O)(OH)(Me2EBC)]+ revealed Mn–O scatterers at 1.71 and 1.84 Å and Mn–N scatterers at 2.11 Å, providing the first unambiguous support for the formulation of this species as an oxohydroxomanganese(IV) adduct. EXAFS-determined structural parameters for [MnII(Cl)2(Me2EBC)] and [MnIV(OH)2(Me2EBC)]2+ are consistent with previously reported crystal structures. The Mn pre-edge energies and intensities of these complexes were examined within the context of data for other oxo- and hydroxomanganese(IV) adducts, and time-dependent density functional theory (TD-DFT) computations were used to predict pre-edge properties for all compounds considered. This combined experimental and computational analysis revealed a correlation between the Mn–O(H) distances and pre-edge peak areas of MnIV=O and MnIV–OH complexes, but this trend was strongly modulated by the MnIV coordination geometry. Mn 3d-4p mixing, which primarily accounts for the pre-edge intensities, is not solely a function of the Mn–O(H) bond length; the coordination geometry also has a large effect on the distribution of pre-edge intensity. For tetragonal MnIV=O centers, more than 90% of the pre-edge intensity comes from excitations to the Mn=O σ* MO. Trigonal bipyramidal oxomanganese(IV) centers likewise feature excitations to the Mn=O σ* molecular orbital (MO) but also show intense transitions to 3dx2–y2 and 3dxy MOs because of enhanced 3d-4px,y mixing. This gives rise to a broader pre-edge feature for trigonal MnIV=O adducts. These results underscore the importance of reporting experimental pre-edge areas

  5. Mn K-edge X-ray absorption studies of oxo- and hydroxo-manganese(IV) complexes: experimental and theoretical insights into pre-edge properties.

    PubMed

    Leto, Domenick F; Jackson, Timothy A

    2014-06-16

    Mn K-edge X-ray absorption spectroscopy (XAS) was used to gain insights into the geometric and electronic structures of [Mn(II)(Cl)2(Me2EBC)], [Mn(IV)(OH)2(Me2EBC)](2+), and [Mn(IV)(O)(OH)(Me2EBC)](+), which are all supported by the tetradentate, macrocyclic Me2EBC ligand (Me2EBC = 4,11-dimethyl-1,4,8,11-tetraazabicyclo[6.6.2]hexadecane). Analysis of extended X-ray absorption fine structure (EXAFS) data for [Mn(IV)(O)(OH)(Me2EBC)](+) revealed Mn-O scatterers at 1.71 and 1.84 Å and Mn-N scatterers at 2.11 Å, providing the first unambiguous support for the formulation of this species as an oxohydroxomanganese(IV) adduct. EXAFS-determined structural parameters for [Mn(II)(Cl)2(Me2EBC)] and [Mn(IV)(OH)2(Me2EBC)](2+) are consistent with previously reported crystal structures. The Mn pre-edge energies and intensities of these complexes were examined within the context of data for other oxo- and hydroxomanganese(IV) adducts, and time-dependent density functional theory (TD-DFT) computations were used to predict pre-edge properties for all compounds considered. This combined experimental and computational analysis revealed a correlation between the Mn-O(H) distances and pre-edge peak areas of Mn(IV)═O and Mn(IV)-OH complexes, but this trend was strongly modulated by the Mn(IV) coordination geometry. Mn 3d-4p mixing, which primarily accounts for the pre-edge intensities, is not solely a function of the Mn-O(H) bond length; the coordination geometry also has a large effect on the distribution of pre-edge intensity. For tetragonal Mn(IV)═O centers, more than 90% of the pre-edge intensity comes from excitations to the Mn═O σ* MO. Trigonal bipyramidal oxomanganese(IV) centers likewise feature excitations to the Mn═O σ* molecular orbital (MO) but also show intense transitions to 3dx(2)-y(2) and 3dxy MOs because of enhanced 3d-4px,y mixing. This gives rise to a broader pre-edge feature for trigonal Mn(IV)═O adducts. These results underscore the importance of

  6. DFT Study of Uranyl Peroxo Complexes with H₂O, F⁻, OH⁻, CO₃ ²⁻, and NO₃-

    SciTech Connect

    Odoh, Samuel O.; Schreckenbach, Georg

    2013-05-06

    The structural and electronic properties of monomeric uranyl peroxo complexes with aquo, hydroxo, fluoro, carbonate, and nitrate ligands have been studied using DFT calculations with relativistic pseudopotentials. The calculated affinity of the peroxo group for the actinyl moiety far exceeds that of the other ligands tested in this work.

  7. Copper(II) complexes of quinoline polyazamacrocyclic scorpiand-type ligands: X-ray, equilibrium and kinetic studies.

    PubMed

    Castillo, Carmen E; Angeles Máñez, M; Basallote, Manuel G; Paz Clares, M; Blasco, Salvador; García-España, Enrique

    2012-05-14

    The formation of Cu(II) complexes with two isomeric quinoline-containing scorpiand-type ligands has been studied. The ligands have a tetraazapyridinophane core appended with an ethylamino tail including 2-quinoline (L1) or 4-quinoline (L2) functionalities. Potentiometric studies indicate the formation of stable CuL(2+) species with both ligands, the L1 complex being 3-4 log units more stable than the L2 complex. The crystal structure of [Cu(L1)](ClO(4))(2)·H(2)O shows that the coordination geometry around the Cu(2+) ions is distorted octahedral with significant axial elongation; the four Cu-N distances in the equatorial plane vary from 1.976 to 2.183 Å, while the axial distances are of 2.276 and 2.309 Å. The lower stability of the CuL2(2+) complex and its capability of forming protonated and hydroxo complexes suggest a penta-dentate coordination of the ligand, in agreement with the type of substitution at the quinoline ring. Kinetic studies on complex formation can be interpreted by considering that initial coordination of L1 and L2 takes place through the nitrogen atom in the quinoline ring. This is followed by coordination of the remaining nitrogen atoms, in a process that is faster in the L1 complex probably because substitution at the quinoline ring facilitates the reorganization. Kinetic studies on complex decomposition provide clear evidence on the occurrence of the molecular motion typical of scorpiands in the case of the L2 complex, for which decomposition starts with a very fast process (sub-millisecond timescale) that involves a shift in the absorption band from 643 to 690 nm.

  8. Water oxidation chemistry of a synthetic dinuclear ruthenium complex containing redox-active quinone ligands.

    PubMed

    Isobe, Hiroshi; Tanaka, Koji; Shen, Jian-Ren; Yamaguchi, Kizashi

    2014-04-21

    We investigated theoretically the catalytic mechanism of electrochemical water oxidation in aqueous solution by a dinuclear ruthenium complex containing redox-active quinone ligands, [Ru2(X)(Y)(3,6-tBu2Q)2(btpyan)](m+) [X, Y = H2O, OH, O, O2; 3,6-tBu2Q = 3,6-di-tert-butyl-1,2-benzoquinone; btpyan =1,8-bis(2,2':6',2″-terpyrid-4'-yl)anthracene] (m = 2, 3, 4) (1). The reaction involves a series of electron and proton transfers to achieve redox leveling, with intervening chemical transformations in a mesh scheme, and the entire molecular structure and motion of the catalyst 1 work together to drive the catalytic cycle for water oxidation. Two substrate water molecules can bind to 1 with simultaneous loss of one or two proton(s), which allows pH-dependent variability in the proportion of substrate-bound structures and following pathways for oxidative activation of the aqua/hydroxo ligands at low thermodynamic and kinetic costs. The resulting bis-oxo intermediates then undergo endothermic O-O radical coupling between two Ru(III)-O(•) units in an anti-coplanar conformation leading to bridged μ-peroxo or μ-superoxo intermediates. The μ-superoxo species can liberate oxygen with the necessity for the preceding binding of a water molecule, which is possible only after four-electron oxidation is completed. The magnitude of catalytic current would be limited by the inherent sluggishness of the hinge-like bending motion of the bridged μ-superoxo complex that opens up the compact, hydrophobic active site of the catalyst and thereby allows water entry under dynamic conditions. On the basis of a newly proposed mechanism, we rationalize the experimentally observed behavior of electrode kinetics with respect to potential and discuss what causes a high overpotential for water oxidation by 1.

  9. Sorption of trivalent lanthanides and actinides onto montmorillonite: Macroscopic, thermodynamic and structural evidence for ternary hydroxo and carbonato surface complexes on multiple sorption sites.

    PubMed

    Fernandes, M Marques; Scheinost, A C; Baeyens, B

    2016-08-01

    The credibility of long-term safety assessments of radioactive waste repositories may be greatly enhanced by a molecular level understanding of the sorption processes onto individual minerals present in the near- and far-fields. In this study we couple macroscopic sorption experiments to surface complexation modelling and spectroscopic investigations, including extended X-ray absorption fine structure (EXAFS) and time-resolved laser fluorescence spectroscopies (TRLFS), to elucidate the uptake mechanism of trivalent lanthanides and actinides (Ln/An(III)) by montmorillonite in the absence and presence of dissolved carbonate. Based on the experimental sorption isotherms for the carbonate-free system, the previously developed 2 site protolysis non electrostatic surface complexation and cation exchange (2SPNE SC/CE) model needed to be complemented with an additional surface complexation reaction onto weak sites. The fitting of sorption isotherms in the presence of carbonate required refinement of the previously published model by reducing the strong site capacity and by adding the formation of Ln/An(III)-carbonato complexes both on strong and weak sites. EXAFS spectra of selected Am samples and TRLFS spectra of selected Cm samples corroborate the model assumptions by showing the existence of different surface complexation sites and evidencing the formation of Ln/An(III) carbonate surface complexes. In the absence of carbonate and at low loadings, Ln/An(III) form strong inner-sphere complexes through binding to three Al(O,OH)6 octahedra, most likely by occupying vacant sites in the octahedral layers of montmorillonite, which are exposed on {010} and {110} edge faces. At higher loadings, Ln/An(III) binds to only one Al octahedron, forming a weaker, edge-sharing surface complex. In the presence of carbonate, we identified a ternary mono- or dicarbonato Ln/An(III) complex binding directly to one Al(O,OH)6 octahedron, revealing that type-A ternary complexes form with the one

  10. Neodymium(III) Complexation by Amino-Carbohydrates via a Ligand-Controlled Hydrolysis Mechanism

    SciTech Connect

    Levitskaia, Tatiana G.; Chen, Yongsheng; Fulton, John L.; Sinkov, Sergey I.

    2011-07-28

    Chelation of neodymium-III Nd(III) by D-glucosamine (DGA) and chitosan was investigated in solution at near-physiological pH and ionic strength. This research demonstrates the first example of the lanthanide ion heteroleptic hydroxo-carbohydrate complex in solution. It was demonstrated that DGA and chitosan suppressed formation of polynuclear Nd(III) species at elevated pH.

  11. Thermodynamics and high-pressure kinetics of a fast carbon dioxide fixation reaction by a (2,6-pyridinedicarboxamidato-hydroxo)nickel(II) complex.

    PubMed

    Troeppner, O; Huang, D; Holm, R H; Ivanović-Burmazović, I

    2014-04-14

    The previously reported carbon dioxide fixation reaction by the planar terminal hydroxide complex [Ni(pyN2(Me2))(OH)](1-) in DMF has been further characterized by determination of the equilibrium constants K(eq)²⁹⁸ = 2.4 ± 0.2 × 10(5) M(-1) and K(eq)²²³ = 1.3 ± 0.1 × 10(7) M(-1), as well as the volume of activation for the CO2 binding (ΔV(on)(≠223) = -21 ± 3 cm(3) mol(-1)) and back decarboxylation (ΔV(off)(≠223) = -13 ± 1 cm(3) mol(-1)) by high-pressure kinetics. The data are consistent with an earlier DFT computation, including the probable nature of the transition state, and support designating the reaction as one of the most completely investigated carbon dioxide fixation reactions of any type.

  12. Effect of Inter-Porphyrin Distance on Spin-State in Diiron(III) μ-Hydroxo Bisporphyrins.

    PubMed

    Sil, Debangsu; Khan, Firoz Shah Tuglak; Rath, Sankar Prasad

    2016-10-04

    The synthesis, structure, and properties of bischloro, μ-oxo, and a family of μ-hydroxo complexes (with BF4 (-) , SbF6 (-) , and PF6 (-) counteranions) of diethylpyrrole-bridged diiron(III) bisporphyrins are reported. Spectroscopic characterization has revealed that the iron centers of the bischloro and μ-oxo complexes are in the high-spin state (S=(5) /2 ). However, the two iron centers in the diiron(III) μ-hydroxo complexes are equivalent with high spin (S=(5) /2 ) in the solid state and an intermediate-spin state (S=(3) /2 ) in solution. The molecules have been compared with previously known diiron(III) μ-hydroxo complexes of ethane-bridged bisporphyrin, in which two different spin states of iron were stabilized under the influence of counteranions. The dimanganese(III) analogues were also synthesized and spectroscopically characterized. A comparison of the X-ray structural parameters between diethylpyrrole and ethane-bridged μ-hydroxo bisporphyrins suggest an increased separation, and hence, less interactions between the two heme units of the former. As a result, unlike the ethane-bridged μ-hydroxo complex, both iron centers become equivalent in the diethylpyrrole-bridged complex and their spin state remains unresponsive to the change in counteranion. The iron(III) centers of the diethylpyrrole-bridged diiron(III) μ-oxo bisporphyrin undergo very strong antiferromagnetic interactions (J=-137.7 cm(-1) ), although the coupling constant is reduced to only a weak value in the μ-hydroxo complexes (J=-42.2, -44.1, and -42.4 cm(-1) for the BF4 , SbF6 , and PF6 complexes, respectively).

  13. Ligand-Controlled CO2 Activation Mediated by Cationic Titanium Hydride Complexes, [LTiH](+) (L=Cp2 , O).

    PubMed

    Tang, Shi-Ya; Rijs, Nicole J; Li, Jilai; Schlangen, Maria; Schwarz, Helmut

    2015-06-01

    CO2 activation mediated by [LTiH](+) (L=Cp2 , O) is observed in the gas phase at room temperature using electrospray-ionization mass spectrometry, and reaction details are derived from traveling wave ion-mobility mass spectrometry. Wheresas oxygen-atom transfer prevails in the reaction of the oxide complex [OTiH](+) with CO2 , generating [OTi(OH)](+) under the elimination of CO, insertion of CO2 into the metal-hydrogen bond of the cyclopentadienyl complex, [Cp2 TiH](+) , gives rise to the formate complex [Cp2 Ti(O2 CH)](+) . DFT-based methods were employed to understand how the ligand controls the observed variation in reactivity toward CO2 . Insertion of CO2 into the Ti-H bond constitutes the initial step for the reaction of both [Cp2 TiH](+) and [OTiH](+) , thus generating formate complexes as intermediates. In contrast to [Cp2 Ti(O2 CH)](+) which is kinetically stable, facile decarbonylation of [OTi(O2 CH)](+) results in the hydroxo complex [OTi(OH)](+) . The longer lifetime of [Cp2 Ti(O2 CH)](+) allows for secondary reactions with background water, as a result of which, [Cp2 Ti(OH)](+) is formed. Further, computational studies reveal a good linear correlation between the hydride affinity of [LTi](2+) and the barrier for CO2 insertion into various [LTiH](+) complexes. Understanding the intrinsic ligand effects may provide insight into the selective activation of CO2 .

  14. Measurement of protein-ligand complex formation.

    PubMed

    Lowe, Peter N; Vaughan, Cara K; Daviter, Tina

    2013-01-01

    Experimental approaches to detect, measure, and quantify protein-ligand binding, along with their theoretical bases, are described. A range of methods for detection of protein-ligand interactions is summarized. Specific protocols are provided for a nonequilibrium procedure pull-down assay, for an equilibrium direct binding method and its modification into a competition-based measurement and for steady-state measurements based on the effects of ligands on enzyme catalysis.

  15. Cationic aluminum alkyl complexes incorporating aminotroponiminate ligands.

    PubMed

    Korolev, A V; Ihara, E; Guzei, I A; Young, V G; Jordan, R F

    2001-08-29

    The synthesis, structures, and reactivity of cationic aluminum complexes containing the N,N'-diisopropylaminotroponiminate ligand ((i)Pr(2)-ATI(-)) are described. The reaction of ((i)Pr(2)-ATI)AlR(2) (1a-e,g,h; R = H (a), Me (b), Et (c), Pr (d), (i)Bu (e), Cy (g), CH(2)Ph (h)) with [Ph(3)C][B(C(6)F(5))(4)] yields ((i)()Pr(2)-ATI)AlR(+) species whose fate depends on the properties of the R ligand. 1a and 1b react with 0.5 equiv of [Ph(3)C][B(C(6)F(5))(4)] to produce dinuclear monocationic complexes [([(i)Pr(2)-ATI] AlR)(2)(mu-R)][(C(6)F(5))(4)] (2a,b). The cation of 2b contains two ((i)()Pr(2)-ATI)AlMe(+) units linked by an almost linear Al-Me-Al bridge; 2a is presumed to have an analogous structure. 2b does not react further with [Ph(3)C][B(C(6)F(5))(4)]. However, 1a reacts with 1 equiv of [Ph(3)C][B(C(6)F(5))(4)] to afford ((i Pr(2)-ATI)Al(C(6)F(5))(mu-H)(2)B(C(6)F(5))(2) (3) and other products, presumably via C(6)F(5)(-) transfer and ligand redistribution of a [((i)()Pr(2)-ATI)AlH][(C(6)F(5))(4)] intermediate. 1c-e react with 1 equiv of [Ph(3)C][B(C(6)F(5))(4)] to yield stable base-free [((i)Pr(2)-ATI)AlR][B(C(6)F(5))(4)] complexes (4c-e). 4c crystallizes from chlorobenzene as 4c(ClPh).0.5PhCl, which has been characterized by X-ray crystallography. In the solid state the PhCl ligand of 4c(ClPh) is coordinated by a dative PhCl-Al bond and an ATI/Ph pi-stacking interaction. 1g,h react with [Ph(3)C][B(C(6)F(5))(4)] to yield ((i)Pr(2)-ATI)Al(R)(C(6)F(5)) (5g,h) via C(6)F(5)(-) transfer of [((i)Pr(2)-ATI)AlR][(BC(6)F(5))(4)] intermediates. 1c,h react with B(C(6)F(5))(3) to yield ((i)Pr(2)-ATI)Al(R)(C(6)F(5)) (5c,h) via C(6)F(5)(-) transfer of [((i)Pr(2)-ATI)AlR][RB(C(6)F(5))(3)] intermediates. The reaction of 4c-e with MeCN or acetone yields [((i)Pr(2)-ATI)Al(R)(L)][B(C(6)F(5))(4)] adducts (L = MeCN (8c-e), acetone (9c-e)), which undergo associative intermolecular L exchange. 9c-e undergo slow beta-H transfer to afford the dinuclear dicationic alkoxide complex [(((i

  16. Dimolybdenum cyclopentadienyl complexes with bridging chalcogenophosphinidene ligands.

    PubMed

    Alvarez, Belén; Alvarez, M Angeles; Amor, Inmaculada; García, M Esther; García-Vivó, Daniel; Suárez, Jaime; Ruiz, Miguel A

    2012-07-16

    The reactions of the phosphinidene-bridged complex [Mo(2)Cp(2)(μ-PH)(η(6)-HMes*)(CO)(2)] (1), the arylphosphinidene complexes [Mo(2)Cp(2)(μ-κ(1):κ(1),η(6)-PMes*)(CO)(2)] (2), [Mo(2)Cp(2)(μ-κ(1):κ(1),η(4)-PMes*)(CO)(3)] (3), [Mo(2)Cp(2)(μ-κ(1):κ(1),η(4)-PMes*)(CO)(2)(CN(t)Bu)] (4), and the cyclopentadienylidene-phosphinidene complex [Mo(2)Cp(μ-κ(1):κ(1),η(5)-PC(5)H(4))(η(6)-HMes*)(CO)(2)] (5) toward different sources of chalcogen atoms were investigated (Mes* = 2,4,6-C(6)H(2)(t)Bu(3); Cp = η(5)-C(5)H(5)). The bare elements were appropriate sources in all cases except for oxygen, in which case dimethyldioxirane gave the best results. Complex 1 reacted with the mentioned chalcogen sources at low temperature, to give the corresponding chalcogenophosphinidene derivatives [Mo(2)Cp(2){μ-κ(2)(P,Z):κ(1)(P)-ZPH}(η(6)-HMes*)(CO)(2)] (Z = O, S, Se, Te; P-Se = 2.199(2) Å). The arylphosphinidene complex 2 was the least reactive substrate and gave only chalcogenophosphinidene derivatives [Mo(2)Cp(2)(μ-κ(2)(P,Z):κ(1)(P),η(6)-ZPMes*)(CO)(2)] for Z = O and S (P-O = 1.565(2) Å), along with small amounts of the dithiophosphorane complex [Mo(2)Cp(2)(μ-κ(2)(P,S):κ(1)(S'),η(6)-S(2)PMes*)(CO)(2)], in the reaction with sulfur. The η(4)-complexes 3 and 4 reacted with sulfur and gray selenium to give the corresponding derivatives [Mo(2)Cp(2)(μ-κ(2)(P,Z):κ(1)(P),η(4)-ZPMes*)(CO)(2)L] (L = CO, CN(t)Bu), obtained respectively as syn (Z = Se; P-Se = 2.190(1) Å for L = CO) or a mixture of syn and anti isomers (Z = S; P-S = 2.034(1)-2.043(1) Å), with these diastereoisomers differing in the relative positioning of the chalcogen atom and the terminal ligand at the metallocene fragment, relative to the Mo(2)P plane. The cyclopentadienylidene compound 5 reacted with all chalcogens, and gave with good yields the chalcogenophosphinidene derivatives [Mo(2)Cp(μ-κ(2)(P,Z):κ(1)(P),η(5)-ZPC(5)H(4))(η(6)-HMes*)(CO)(2)] (Z = S, Se, Te), these displaying in solution

  17. Undecametallic and hexadecametallic ferric oxo–hydroxo/ethoxo pivalate clusters

    DOE PAGES

    Baca, Svetlana G.; Speldrich, Manfred; van Leusen, Jan; ...

    2015-03-27

    The synthesis strategies for highly condensed {Fe11} and {Fe16} pivalate clusters have been developed based on archetypal geometrically frustrated triangular {Fe3(μ3-O)} motifs that are interlinked via oxo, hydroxo, ethoxo, and carboxylate groups.

  18. Unique advantages of organometallic supporting ligands for uranium complexes

    SciTech Connect

    Diaconescu, Paula L.; Garcia, Evan

    2014-05-31

    The objective of our research project was to study the reactivity of uranium complexes supported by ferrocene-based ligands. In addition, this research provides training of graduate students as the next generation of actinide scientists.

  19. Dinuclear cobalt(II) and copper(II) complexes with a Py2N4S2 macrocyclic ligand.

    PubMed

    Núñez, Cristina; Bastida, Rufina; Lezama, Luis; Macías, Alejandro; Pérez-Lourido, Paulo; Valencia, Laura

    2011-06-20

    The interaction between Co(II) and Cu(II) ions with a Py(2)N(4)S(2)-coordinating octadentate macrocyclic ligand (L) to afford dinuclear compounds has been investigated. The complexes were characterized by microanalysis, conductivity measurements, IR spectroscopy and liquid secondary ion mass spectrometry. The crystal structure of the compounds [H(4)L](NO(3))(4), [Cu(2)LCl(2)](NO(3))(2) (5), [Cu(2)L(NO(3))(2)](NO(3))(2) (6), and [Cu(2)L(μ-OH)](ClO(4))(3)·H(2)O (7) was also determined by single-crystal X-ray diffraction. The [H(4)L](4+) cation crystal structure presents two different conformations, planar and step, with intermolecular face-to-face π,π-stacking interactions between the pyridinic rings. Complexes 5 and 6 show the metal ions in a slightly distorted square-pyramidal coordination geometry. In the case of complex 7, the crystal structure presents the two metal ions joined by a μ-hydroxo bridge and the Cu(II) centers in a slightly distorted square plane or a tetragonally distorted octahedral geometry, taking into account weak interactions in axial positions. Electron paramagnetic resonance spectroscopy is in accordance with the dinuclear nature of the complexes, with an octahedral environment for the cobalt(II) compounds and square-pyramidal or tetragonally elongated octahedral geometries for the copper(II) compounds. The magnetic behavior is consistent with the existence of antiferromagnetic interactions between the ions for cobalt(II) and copper(II) complexes, while for the Co(II) ones, this behavior could also be explained by spin-orbit coupling.

  20. Rhodium complexes bearing tetradentate diamine-bis(phenolate) ligands

    SciTech Connect

    Liu, Xiang Y; Lokare, Kapil S; Ganesh, Somesh K; Gonzales, Jason M; Oxgaard, Jonas; Goddard, William A; Periana, Roy A

    2011-01-01

    Using tetradentate, dianionic ligands, several new rhodium complexes have been prepared. Some of these diamine-bis(phenolate) compounds, are active for C–H activation of benzene. These complexes are air and thermally stable. All four complexes were characterized by X-ray diffraction.

  1. Thermodynamics of complexation in an aqueous solution of Tb(III) nitrate at 298 K

    NASA Astrophysics Data System (ADS)

    Lobacheva, O. L.; Berlinskii, I. V.; Dzhevaga, N. V.

    2017-01-01

    The pH of the formation of hydroxo complexes and hydrates in an aqueous solution of terbium Tb(III) is determined using combined means of potentiometric and conductometric titration. The stability constants of the hydroxo complexes, the products of hydroxide solubility, and the Gibbs energy of terbium hydroxo complex formation are calculated.

  2. Full-electron ligand-to-ligand charge transfer in a compact Re(I) complex.

    PubMed

    Yue, Yuankai; Grusenmeyer, Tod; Ma, Zheng; Zhang, Peng; Schmehl, Russell H; Beratan, David N; Rubtsov, Igor V

    2014-11-13

    Ligand-to-ligand charge transfer (LLCT) states in transition metal complexes are often characterized by fractional electron transfer due to coupling of the LLCT state with many other states via the metal. We designed and characterized a compact Re(I) complex that displays essentially full-electron charge transfer in the LLCT excited state. The complex, [Re(DCEB)(CO)3(L)](+) (DCEB = 4,4'-dicarboxyethyl-2,2'-bipyridine), referred to as ReEBA, features two redox active ligands with strong electron accepting (DCEB) and electron donating (L is 3-dimethylaminobenzonitrile (3DMABN)) properties. The lowest energy excited state formed with a ca. 10 ps time constant and was characterized as the full-electron 3DMABN → DCEB LLCT state using time-resolved infrared spectroscopy (TRIR), transient absorption spectroscopy, and DFT computations. Analysis of a range of vibrational modes helped to assign the charge transfer characteristics of the complex. The LLCT state lifetime in ReEBA shows a strong dependence on the solvent polarity and features solvent dependent frequency shifts for several vibrational reporters. The formation of a full-electron LLCT state (∼92%) was enabled by tuning the redox properties of the electron accepting ligand (DCEB) and simultaneously decoupling the redox active group of the electron donating ligand (3DMABN) from the metal center. This strategy is generally applicable for designing compact transition metal complexes that have full-electron LLCT states.

  3. Dissociation of Multisubunit Protein-Ligand Complexes in the Gas Phase. Evidence for Ligand Migration

    NASA Astrophysics Data System (ADS)

    Zhang, Yixuan; Deng, Lu; Kitova, Elena N.; Klassen, John S.

    2013-10-01

    The results of collision-induced dissociation (CID) experiments performed on gaseous protonated and deprotonated ions of complexes of cholera toxin B subunit homopentamer (CTB5) with the pentasaccharide (β-D-Gal p-(1→3)-β-D-Gal pNAc-(1→4)[α-D-Neu5Ac-(2→3)]-β-D-Gal p-(1→4)-β-D-Glc p (GM1)) and corresponding glycosphingolipid (β-D-Gal p-(1→3)-β-D-Gal pNAc-(1→4)[α-D-Neu5Ac-(2→3)]-β-D-Gal p-(1→4)-β-D-Glc p-Cer (GM1-Cer)) ligands, and the homotetramer streptavidin (S4) with biotin (B) and 1,2-dipalmitoyl- sn-glycero-3-phosphoethanolamine-N-(biotinyl) (Btl), are reported. The protonated (CTB5 + 5GM1)n+ ions dissociated predominantly by the loss of a single subunit, with the concomitant migration of ligand to another subunit. The simultaneous loss of ligand and subunit was observed as a minor pathway. In contrast, the deprotonated (CTB5 + 5GM1)n- ions dissociated preferentially by the loss of deprotonated ligand; the loss of ligand-bound and ligand-free subunit were minor pathways. The presence of ceramide (Cer) promoted ligand migration and the loss of subunit. The main dissociation pathway for the protonated and deprotonated (S4 + 4B)n+/- ions, as well as for deprotonated (S4 + 4Btl)n- ions, was loss of the ligand. However, subunit loss from the (S4 + 4B)n+ ions was observed as a minor pathway. The (S4 + 4Btl)n+ ions dissociated predominantly by the loss of free and ligand-bound subunit. The charge state of the complex and the collision energy were found to have little effect on the relative contribution of the different dissociation channels. Thermally-driven ligand migration between subunits was captured in the results of molecular dynamics simulations performed on protonated (CTB5 + 5GM1)15+ ions (with a range of charge configurations) at 800 K. Notably, the migration pathway was found to be highly dependent on the charge configuration of the ion. The main conclusion of this study is that the dissociation pathways of multisubunit protein-ligand

  4. Luminescent cyclometallated iridium(III) complexes having acetylide ligands

    DOEpatents

    Thompson, Mark E.; Bossi, Alberto; Djurovich, Peter Ivan

    2014-09-02

    The present invention relates to phosphorescent (triplet-emitting) organometallic materials. The phosphorescent materials of the present invention comprise Ir(III)cyclometallated alkynyl complexes for use as triplet light-emitting materials. The Ir(III)cyclometallated alkynyl complexes comprise at least one cyclometallating ligand and at least one alkynyl ligand bonded to the iridium. Also provided is an organic light emitting device comprising an anode, a cathode and an emissive layer between the anode and the cathode, wherein the emissive layer comprises a Ir(III)cyclometallated alkynyl complex as a triplet emitting material.

  5. CLiBE: a database of computed ligand binding energy for ligand-receptor complexes.

    PubMed

    Chen, X; Ji, Z L; Zhi, D G; Chen, Y Z

    2002-11-01

    Consideration of binding competitiveness of a drug candidate against natural ligands and other drugs that bind to the same receptor site may facilitate the rational development of a candidate into a potent drug. A strategy that can be applied to computer-aided drug design is to evaluate ligand-receptor interaction energy or other scoring functions of a designed drug with that of the relevant ligands known to bind to the same binding site. As a tool to facilitate such a strategy, a database of ligand-receptor interaction energy is developed from known ligand-receptor 3D structural entries in the Protein Databank (PDB). The Energy is computed based on a molecular mechanics force field that has been used in the prediction of therapeutic and toxicity targets of drugs. This database also contains information about ligand function and other properties and it can be accessed at http://xin.cz3.nus.edu.sg/group/CLiBE.asp. The computed energy components may facilitate the probing of the mode of action and other profiles of binding. A number of computed energies of some PDB ligand-receptor complexes in this database are studied and compared to experimental binding affinity. A certain degree of correlation between the computed energy and experimental binding affinity is found, which suggests that the computed energy may be useful in facilitating a qualitative analysis of drug binding competitiveness.

  6. Aluminum complexes of the redox-active [ONO] pincer ligand.

    PubMed

    Szigethy, Géza; Heyduk, Alan F

    2012-07-14

    A series of aluminum complexes containing the tridentate, redox-active ligand bis(3,5-di-tert-butyl-2-phenol)amine ([ONO]H(3)) in three different oxidation states were synthesized. The aluminum halide salts AlCl(3) and AlBr(3) were reacted with the doubly deprotonated form of the ligand to afford five-coordinate [ONHO(cat)]AlX(solv) complexes (1a, X = Cl, solv = OEt(2); 1b, X = Br, solv = THF), each having a trigonal bipyramidal coordination geometry at the aluminum and containing the [ONHO(cat)](2-) ligand with a protonated, sp(3)-hybridized nitrogen donor. The [ONO] ligand platform may also be added to aluminum through the use of the oxidized ligand salt [ONO(q)]K, which was reacted with AlCl(3) in the presence of either diphenylacetylacetonate (acacPh(2)(-)) or 8-oxyquinoline (quinO(-)) to afford [ONO(q)]Al(acacPh(2))Cl (2) or [ONO(q)]Al(quinO)Cl (3), respectively, with well-defined [ONO(q)](-) ligands. Quinonate complexes 2 and 3 were reduced by one electron to afford the corresponding complexes K{[ONO(sq)]Al(acacPh(2))(py)} (4) and K{[ONO(sq)]Al(quinO)(py)} (5), respectively, containing well-defined [ONO(sq)](2-) ligands. The addition of tetrachloro-1,2-quinone to 1a in the presence of pyridine resulted in the expulsion of HCl and the formation of an aluminum complex with two different redox active ligands, [ONO]Al(o-O(2)C(6)Cl(4))(py) (6). Similar results were obtained when 1a was reacted with 9,10-phenanthrenequinone to afford [ONO]Al(o-O(2)C(14)H(8))(py) (7) or with pyrene-4,5-dione to afford [ONO]Al(o-O(2)C(16)H(8))(py) (8). Structural, spectroscopic and preliminary magnetic measurements on 6-8 suggest ligand non-innocent redox behavior in these complexes.

  7. Syntheses, spectral, electrochemical and thermal studies of mononuclear manganese(III) complexes with ligands derived from 1,2-propanediamine and 2-hydroxy-3 or 5-methoxybenzaldehyde: Self-assembled monolayer formation on nanostructure zinc oxide thin film

    NASA Astrophysics Data System (ADS)

    Habibi, Mohammad Hossein; Askari, Elham; Amirnasr, Mehdi; Amiri, Ahmad; Yamane, Yuki; Suzuki, Takayoshi

    2011-08-01

    Mononuclear Mn(III) complexes have been prepared via the Mn(II) reaction of an equimolar of Schiff-bases derived from reaction of 2-hydroxy-3-methoxybenzaldehyde or 2-hydroxy-5-methoxybenzaldehyde with 1,2-diaminopropane. Axial ligands L include: pyridine (py) and H 2O. The resulting complexes have been characterized by FT-IR and UV-vis spectroscopy. The crystal structures of the complexes were determined and indicate that in the solid state the complex adopts a slightly distorted octahedral environment of the imine N and hydroxo O with the two axial ligands. The electrochemical reduction of these complexes at a glassy carbon electrode in acetonitrile solution indicates that the first reduction process corresponding to Mn III-Mn II is electrochemically quasi-reversible. Thermal stability of these complexes was determined by TG and DTG. Layers of these complexes were formed on nanostructure zinc oxide thin film and a red shift was observed when zinc oxide thin film is modified by complex.

  8. Syntheses, spectral, electrochemical and thermal studies of mononuclear manganese(III) complexes with ligands derived from 1,2-propanediamine and 2-hydroxy-3 or 5-methoxybenzaldehyde: self-assembled monolayer formation on nanostructure zinc oxide thin film.

    PubMed

    Habibi, Mohammad Hossein; Askari, Elham; Amirnasr, Mehdi; Amiri, Ahmad; Yamane, Yuki; Suzuki, Takayoshi

    2011-08-01

    Mononuclear Mn(III) complexes have been prepared via the Mn(II) reaction of an equimolar of Schiff-bases derived from reaction of 2-hydroxy-3-methoxybenzaldehyde or 2-hydroxy-5-methoxybenzaldehyde with 1,2-diaminopropane. Axial ligands L include: pyridine (py) and H(2)O. The resulting complexes have been characterized by FT-IR and UV-vis spectroscopy. The crystal structures of the complexes were determined and indicate that in the solid state the complex adopts a slightly distorted octahedral environment of the imine N and hydroxo O with the two axial ligands. The electrochemical reduction of these complexes at a glassy carbon electrode in acetonitrile solution indicates that the first reduction process corresponding to Mn(III)-Mn(II) is electrochemically quasi-reversible. Thermal stability of these complexes was determined by TG and DTG. Layers of these complexes were formed on nanostructure zinc oxide thin film and a red shift was observed when zinc oxide thin film is modified by complex.

  9. Isothermal Titration Calorimetry: Assisted Crystallization of RNA-Ligand Complexes.

    PubMed

    Da Veiga, Cyrielle; Mezher, Joelle; Dumas, Philippe; Ennifar, Eric

    2016-01-01

    The success rate of nucleic acids/ligands co-crystallization can be significantly improved by performing preliminary biophysical analyses. Among suitable biophysical approaches, isothermal titration calorimetry (ITC) is certainly a method of choice. ITC can be used in a wide range of experimental conditions to monitor in real time the formation of the RNA- or DNA-ligand complex, with the advantage of providing in addition the complete binding profile of the interaction. Following the ITC experiment, the complex is ready to be concentrated for crystallization trials. This chapter describes a detailed experimental protocol for using ITC as a tool for monitoring RNA/small molecule binding, followed by co-crystallization.

  10. Hydridoborylene complexes and di-, tri-, and tetranuclear borido complexes with hydride ligands.

    PubMed

    Bauer, Jürgen; Bertsch, Stefanie; Braunschweig, Holger; Dewhurst, Rian D; Ferkinghoff, Katharina; Hörl, Christian; Kraft, Katharina; Radacki, Krzysztof

    2013-12-16

    Mono- and dinuclear hydridoborylene complexes were prepared by intermetallic borylene transfer from Group VI borylene or metalloborylene reagents. The hydride and borylene ligands were found to interact with each other significantly, although the boron ligand retains much of its former borylene character. Zero-valent platinum fragments were successively added to the dinuclear hydridoborylene complexes, resulting in tri- and tetranuclear borido complexes, in which the B-H interaction has been lost, and the hydride ligands now bridge two metal centers. The complexes were studied spectroscopically, crystallographically, and by DFT methods, and the unusual bonding situation in the M-B-H triangles of hydridoborylene complexes were evaluated.

  11. Ligand influences on homoleptic Group 12 m-terphenyl complexes.

    PubMed

    Blundell, Toby J; Hastings, Fiona R; Gridley, Benjamin M; Moxey, Graeme J; Lewis, William; Blake, Alexander J; Kays, Deborah L

    2014-10-14

    Three m-terphenyl ligands 2,6-Ar2C6H3(-) [Ar = 2,6-Me2C6H3 (2,6-Xyl); 3,5-Me2C6H3 (3,5-Xyl); 2,3,4,5,6-Me5C6 (Pmp)] have been used to stabilise three series of two-coordinate Group 12 diaryl complexes; (2,6-Ar2C6H3)2M [M = Zn, Cd, Hg, Ar = 2,6-Xyl 1-3, 3,5-Xyl 4-6, Pmp 7-9], where differing steric demands on the metal centres are imparted. These are the first homoleptic d-block complexes featuring any of these ligands. Complexes 1-9 have been characterised in solution and the solid state; the analysis of structural changes produced by differences in ligand properties is reported. In particular, complexes 4-6 show smaller C-M-C bond angles and contain secondary ligand interactions that are not seen in the analogous complexes 1-3 and 7-9.

  12. Designing simple tridentate ligands for highly luminescent europium complexes.

    PubMed

    Shavaleev, Nail M; Eliseeva, Svetlana V; Scopelliti, Rosario; Bünzli, Jean-Claude G

    2009-10-19

    A series of tridentate benzimidazole-substituted pyridine-2-carboxylic acids have been prepared with a halogen, methyl or alkoxy group in the 6-position of the benzimidazole ring, which additionally contains a solubilising N-alkyl chain. The ligands form neutral homoleptic nine-coordinate lanthanum, europium and terbium complexes as established from X-ray crystallographic analysis of eight structures. The coordination polyhedron around the lanthanide ion is close to a tricapped trigonal prism with ligands arranged in an up-up-down fashion. The coordinated ligands serve as light-harvesting chromophores in the complexes with absorption maxima in the range 321-341 nm (epsilon=(4.9-6.0)x10(4) M(-1) cm(-1)) and triplet-state energies between 21 300 and 18 800 cm(-1); the largest redshifts occur for bromine and electron-donor alkoxy substituents. The ligands efficiently sensitise europium luminescence with overall quantum yields (Q(L)(Eu)) and observed lifetimes (tau(obs)) reaching 71 % and 3.00 ms, respectively, in the solid state and 52 % and 2.81 ms, respectively, in CH(2)Cl(2) at room temperature. The radiative lifetimes of the Eu((5)D(0)) level amount to tau(rad)=3.6-4.6 ms and the sensitisation efficiency eta(sens)=Q(L)(Eu)(tau(rad)/tau(obs)) is close to unity for most of the complexes in the solid state and equal to approximately 80 % in solution. The photophysical parameters of the complexes correlate with the triplet energy of the ligands, which in turn is determined by the nature of the benzimidazole substituent. Facile modification of the ligands makes them promising for the development of brightly emissive europium-containing materials.

  13. Synthesis, spectroscopic, thermogravimetric and antimicrobial studies of mixed ligands complexes

    NASA Astrophysics Data System (ADS)

    Mahmoud, Walaa H.; Mahmoud, Nessma F.; Mohamed, Gehad G.; El-Sonbati, Adel Z.; El-Bindary, Ashraf A.

    2015-09-01

    An interesting series of mixed ligand complexes have been synthesized by the reaction of metal chloride with guaifenesin (GFS) in the presence of 2-aminoacetic acid (HGly) (1:1:1 molar ratio). The elemental analysis, magnetic moments, molar conductance, spectral (UV-Vis, IR, 1H NMR and ESR) and thermal studies were used to characterize the isolated complexes. The molecular structure of GFS is optimized theoretically and the quantum chemical parameters are calculated. The IR showed that the ligand (GFS) acts as monobasic tridentate through the hydroxyl, phenoxy etheric and methoxy oxygen atoms and co-ligand (HGly) as monobasic bidentate through the deprotonated carboxylate oxygen atom and nitrogen atom of amino group. The molar conductivities showed that all the complexes are non-electrolytes except Cr(III) complex is electrolyte. Electronic and magnetic data proposed the octahedral structure for all complexes under investigation. ESR spectrum for Cu(II) revealed data which confirm the proposed structure. Antibacterial screening of the compounds were carried out in vitro on gram positive (Bacillus subtilis and Staphylococcus aureus), gram negative (Escherichia coli and Neisseria gonorrhoeae) bacteria and for in vitro antifungal activity against Candida albicans organism. However, some complexes showed more chemotherapeutic efficiency than the parent GFS drug. The complexes were also screened for their in vitro anticancer activity against the breast cell line (MFC7) and the results obtained showed that they exhibit a considerable anticancer activity.

  14. Trinuclear manganese complexes of unsymmetrical polypodal diamino N3O3 ligands with an unusual [Mn3(μ-OR)4]5+ triangular core: synthesis, characterization, and catalase activity.

    PubMed

    Ledesma, Gabriela N; Anxolabéhère-Mallart, Elodie; Rivière, Eric; Mallet-Ladeira, Sonia; Hureau, Christelle; Signorella, Sandra R

    2014-03-03

    Two new tri-Mn(III) complexes of general formula [Mn3L2(μ-OH)(OAc)]ClO4 (H3L = 1-[N-(2-pyridylmethyl),N-(2-hydroxybenzyl)amino]-3-[N'-(2-hydroxybenzyl),N'-(4-X-benzyl)amino]propan-2-ol; 1ClO4, X = Me; 2ClO4, X = H) have been prepared and characterized. X-ray diffraction analysis of 1ClO4 reveals that the complex cation possesses a Mn3(μ-alkoxo)2(μ-hydroxo)(μ-phenoxo)(4+) core, with the three Mn atoms bound to two fully deprotonated N3O3 chelating L(3-), one exogenous acetato ligand, and one hydroxo bridge, the structure of which is retained upon dissolution in acetonitrile or methanol. The three Mn atoms occupy the vertices of a nearly isosceles triangle (Mn1···Mn3 = 3.6374(12) Å, Mn2···Mn3 3.5583(13) Å, and Mn1···Mn2 3.2400(12) Å), with one substitution-labile site on the apical Mn ion occupied by terminally bound monodentate acetate. Temperature-dependent magnetic susceptibility studies indicate the presence of predominant antiferromagnetic intramolecular interactions between Mn(III) ions in 1ClO4. Complexes 1ClO4 and 2ClO4 decompose H2O2 at comparable rates upon initial binding of peroxide through acetate substitution, with retention of core structure during catalysis. Kinetic and spectroscopic studies suggest that these complexes employ the [Mn-(μ-oxo/aquo)-Mn](4+) moiety to activate peroxide, with the additional (μ-alkoxo)(μ-phenoxo)Mn(μ-alkoxo) metallobridge carrying out a structural function.

  15. Undecametallic and hexadecametallic ferric oxo–hydroxo/ethoxo pivalate clusters

    SciTech Connect

    Baca, Svetlana G.; Speldrich, Manfred; van Leusen, Jan; Ellern, Arkady; Kögerler, Paul

    2015-03-27

    The synthesis strategies for highly condensed {Fe11} and {Fe16} pivalate clusters have been developed based on archetypal geometrically frustrated triangular {Fe33-O)} motifs that are interlinked via oxo, hydroxo, ethoxo, and carboxylate groups.

  16. Ligand redox activity and mixed valency in first-row transition-metal complexes containing tetrachlorocatecholate and radical tetrachlorosemiquinonate ligands.

    PubMed

    Pierpont, Cortlandt G

    2011-10-17

    Ligand noninnocence occurs for complexes composed of redox-active ligands and metals, with frontier orbitals of similar energy. Usually methods of analysis can be used to define the charge distribution, and cases where the metal oxidation state and ligand charge are unclear are unusual. Ligands derived from o-benzoquinones can bond with metals as radical semiquinonates (SQ(•-)) or as catecholates (Cat(2-)). Spectroscopic, magnetic, and structural properties can be used to assess the metal and ligand charges. With the redox activity at both the metal and ligands, reversible multicomponent redox series can be observed using electrochemical methods. Steps in the series may occur at either the ligand or metal, and ligand substituent effects can be used to tune the range of ligand-based redox steps. Complexes that appear as intermediates in a ligand-based redox series may contain both SQ and Cat ligands "bridged" by the metal as mixed-valence complexes. Properties reflect the strength of metal-mediated interligand electronic coupling in the same way that ligand-bridged bimetallics conform to the Robin and Day classification scheme. In this review, we will focus specifically on complexes of first-row transition-metal ions coordinated with three ligands derived from tetrachloro-1,2-benzoquinone (Cl(4)BQ). The redox activity of this ligand overlaps with the potentials of common metal oxidation states, providing examples of metal- and ligand-based redox activity, in some cases, within a single redox series. The strength of the interligand electronic coupling is important in defining the separation between ligand-based couples of a redox series. The complex of ferric iron will be described as an example where coupling is weak, and the steps associated with the Fe(III)(Cl(4)SQ)(3)/[Fe(III)(Cl(4)Cat)(3)](3-) redox series are observed over a narrow range in electrochemical potential.

  17. Gadolinium(III) complexes as MRI contrast agents: ligand design and properties of the complexes.

    PubMed

    Hermann, Petr; Kotek, Jan; Kubícek, Vojtech; Lukes, Ivan

    2008-06-21

    Magnetic resonance imaging is a commonly used diagnostic method in medicinal practice as well as in biological and preclinical research. Contrast agents (CAs), which are often applied are mostly based on Gd(III) complexes. In this paper, the ligand types and structures of their complexes on one side and a set of the physico-chemical parameters governing properties of the CAs on the other side are discussed. The solid-state structures of lanthanide(III) complexes of open-chain and macrocyclic ligands and their structural features are compared. Examples of tuning of ligand structures to alter the relaxometric properties of gadolinium(III) complexes as a number of coordinated water molecules, their residence time (exchange rate) or reorientation time of the complexes are given. Influence of the structural changes of the ligands on thermodynamic stability and kinetic inertness/lability of their lanthanide(III) complexes is discussed.

  18. Supramolecular coordination and antimicrobial activities of constructed mixed ligand complexes

    NASA Astrophysics Data System (ADS)

    El-Sonbati, A. Z.; Diab, M. A.; El-Bindary, A. A.; Abou-Dobara, M. I.; Seyam, H. A.

    2013-03-01

    A novel series of copper(II) and palladium(II) with 4-derivatives benzaldehyde pyrazolone (Ln) were synthesized. The mixed ligand complexes were prepared by using 1,10-phenanthroline (Phen) as second ligand. The structure of these complexes was identified and confirm by elemental analysis, molar conductivity, UV-Vis, IR and 1H NMR spectroscopy and magnetic moment measurements as well as thermal analysis. The ligand behaves as a neutral bidentate ligand through ON donor sites. ESR spectra show the simultaneous presence of a planar trans and a nearly planar cis isomers in the 1:2 ratio for all N,O complexes [Cu(Ln)2]Cl2ṡ2H2O. Schiff bases (Ln) were tested against bacterial species; namely two Gram positive bacteria (Staphylococcus aureus and Bacillus cereus) and two Gram negative bacteria (Escherichia coli and Klebsiella pneumoniae) and fungal species (Aspergillus niger, Fusarium oxysporium, Penicillium italicum and Alternaria alternata). The tested compounds have antibacterial activity against S. aureus, B. cereus and K. pneumoniae.

  19. Rediscovery of halogen bonds in protein-ligand complexes.

    PubMed

    Zhou, P; Tian, F; Zou, J; Shang, Z

    2010-04-01

    Although the halogen bond has attracted much interest in chemistry and material science communities, its implications for drug design are just now coming to light. The protein-ligand interactions through short halogen-oxygen/nitrogen/sulfur contacts have been observed in crystal structures for a long time, but only in recent years, with the experimental and theoretical progress in weak biological interactions, especially the pioneering works contributed by Ho and co-workers (Auffinger, P.; Hays, F. A.; Westhof, E.; Ho, P. S. Proc. Natl. Acad. Sci. USA 2004, 101, 16789-16794), these short contacts involving halogens in biomolecules were rediscovered and re-recognized as halogen bonds to stress their shared similarities with hydrogen bonds in strength and directionality. Crystal structure determinations of protein complexes with halogenated ligands preliminarily unveiled the functionality of halogen bonds in protein-ligand recogni-tion. Database surveys further revealed a considerable number of short halogen-oxygen contacts between proteins and halogenated ligands. Theoretical calculations on model and real systems eventually gave a quantitative pronouncement for the substantial contribution of halogen bonds to ligand binding. All of these works forebode that the halogen bond can be exploited as a new and versatile tool for rational drug design and bio-crystal engineering.

  20. Titanium and niobium imido complexes stabilized by heteroscorpionate ligands.

    PubMed

    Otero, A; Fernández-Baeza, J; Antiñolo, A; Tejeda, J; Lara-Sánchez, A; Sánchez-Barba, L; Rodríguez, A M

    2004-12-07

    The reaction of [Ti(NR)Cl(2)(py)(3)](R = (t)Bu, p-tolyl, 2,6-C(6)H(3)(i)Pr(2)) with [{Li(bdmpza)(H(2)O)}(4)][bdmpza = bis(3,5-dimethylpyrazol-1-yl)acetate] and [{Li(bdmpzdta)(H(2)O)}(4)][bdmpzdta = bis(3,5-dimethylpyrazol-1-yl)dithioacetate] affords the corresponding complexes [Ti(NR)Cl(kappa(3)-bdmpzx)(py)](x = a, R = (t)Bu 1, p-tolyl 2, 2,6-C(6)H(3)(i)Pr(2) 3; x = dta, R =(t)Bu 4, p-tolyl , 2,6-C(6)H(3)(i)Pr(2) 6), which are the first examples of imido Group 4 complexes stabilized by heteroscorpionate ligands. The solid-state X-ray crystal structure of 1 has been determined. The titanium centre is six-coordinate with three fac-sites occupied by the heteroscorpionate ligand and the remainder of the coordination sphere being completed by chloride, imido and pyridine ligands. The complexes are 1-6 fluxional at room temperature. The pyridine ortho- and meta-proton resonances show evidence of dynamic behaviour for this ligand and variable-temperature NMR studies were carried out in order to study their dynamic behaviour in solution. The complexes [Nb(NR)Cl(3)(py)(2)](R = (t)Bu, p-tolyl, 2,6-C(6)H(3)(i)Pr(2)) reacted with [{Li(bdmpza)(H(2)O)}(4)] and (Hbdmpze)[bdmpze = 2,2-bis(3,5-dimethylpyrazol-1-yl)ethoxide], the latter with prior addition of (n)BuLi, to give the complexes [Nb(NR)Cl(2)(kappa(3)-bdmpzx)](x = a, R =(t)Bu 7, p-tolyl 8, 2,6-C(6)H(3)(i)Pr(2) 9; x = e, R = (t)Bu 10, p-tolyl 11, 2,6-C(6)H(3)(i)Pr(2)) 12 and these are the first examples of imido Group 5 complexes with heteroscorpionate ligands. The structures of these complexes have been determined by spectroscopic methods.

  1. Computer simulation of supramolecular assembly by metal-ligand complexation

    NASA Astrophysics Data System (ADS)

    Wang, Shihu; Chen, Chun-Chung; Dormidontova, Elena E.

    2006-03-01

    Monte Carlo simulations were employed to study the supramolecular assembly of oligomers end-functionalized by ligands capable of complexation with metal ions. The properties of these metallo-supramolecular polymers strongly depend on the oligomer concentration, strength of complexation, and metal-to- ligand ratio. At high oligomer concentration the average molecular weight exhibits a maximum near the stoichiometric composition and decreases for higher or lower metal content. On the other hand, at low oligomer concentration the molecular weight shows a local minimum around the stoichiometric composition. This unusual behavior is attributed to the larger population of small rings around the stoichiometric composition, which make up a significant fraction of the overall molecular weight at low oligomer concentration. This effect is especially pronounced at low temperature, where the fraction of rings is higher. The fraction of chains and rings for different concentrations, temperatures and oligomer lengths were calculated and compared with experimental data.

  2. Ultrafast infrared studies of complex ligand rearrangements in solution

    SciTech Connect

    Payne, Christine K.

    2003-01-01

    The complete description of a chemical reaction in solution depends upon an understanding of the reactive molecule as well as its interactions with the surrounding solvent molecules. Using ultrafast infrared spectroscopy it is possible to observe both the solute-solvent interactions and the rearrangement steps which determine the overall course of a chemical reaction. The topics addressed in these studies focus on reaction mechanisms which require the rearrangement of complex ligands and the spectroscopic techniques necessary for the determination of these mechanisms. Ligand rearrangement is studied by considering two different reaction mechanisms for which the rearrangement of a complex ligand constitutes the most important step of the reaction. The first system concerns the rearrangement of a cyclopentadienyl ring as the response of an organometallic complex to a loss of electron density. This mechanism, commonly referred to as ''ring slip'', is frequently cited to explain reaction mechanisms. However, the ring slipped intermediate is too short-lived to be observed using conventional methods. Using a combination of ultrafast infrared spectroscopy and electronic structure calculations it has been shown that the intermediate exists, but does not form an eighteen-electron intermediate as suggested by traditional molecular orbital models. The second example examines the initial steps of alkyne polymerization. Group 6 (Cr, Mo, W) pentacarbonyl species are generated photolytically and used to catalyze the polymerization of unsaturated hydrocarbons through a series of coordination and rearrangement steps. Observing this reaction on the femto- to millisecond timescale indicates that the initial coordination of an alkyne solvent molecule to the metal center results in a stable intermediate that does not rearrange to form the polymer precursor. This suggests that polymerization requires the dissociation of additional carbonyl ligands before rearrangement can occur. Overall

  3. Equilibrium, Kinetic and Structural Properties of Gallium(III) and Some Divalent Metal Complexes Formed with the New DATA(m) and DATA(5m) Ligands.

    PubMed

    Farkas, Edit; Nagel, Johannes; Waldron, Bradley P; Parker, David; Tóth, Imre; Brücher, Ernő; Rösch, Frank; Baranyai, Zsolt

    2017-08-01

    The development of (68) Ge/(68) Ga generators has made the positron-emitting (68) Ga isotope widely accessible and raised interest in new chelate complexes of Ga(3+) . The hexadentate 1,4-di(acetate)-6-methyl[amino(methyl)acetate]perhydro-1,4-diazepane (DATA(m) ) ligand and its bifunctional analogue, 1,4-di(acetate)-6-pentanoic acid[amino(methyl)acetate]perhydro-1,4-diazepane (DATA(5m) ), rapidly form complexes with (68) Ga in high radiochemical yield. The stability constants of DATA(m) and DATA(5m) complexes formed with Ga(3+) , Zn(2+) , Cu(2+) , Mn(2+) and Ca(2+) have been determined by using pH potentiometry, spectrophotometry (Cu(2+) ) and (1) H and (71) Ga NMR spectroscopy (Ga(3+) ). The stability constants of Ga(DATA(m) ) and Ga(DATA(5m) ) complexes are slightly higher than those of Ga(AAZTA). The species distribution calculations indicated the predominance of Ga(L)OH mixed-hydroxo complexes at physiological pH. The (1) H and (71) Ga NMR spectroscopy studies provided information about the coordinated functional groups of ligands and on the kinetics of exchange between the Ga(L) and Ga(L)OH complexes. The transmetalation reactions between the Ga(L) complexes and Cu(2+) citrate (6ligand-exchange reactions between the Ga(L)OH complexes and transferrin. The equilibrium and kinetic data indicate that the Ga(DATA(5m) ) complex is a good (68) Ga-based radiodiagnostic candidate. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  4. The secondary coordination sphere and axial ligand effects on oxygen reduction reaction by iron porphyrins: a DFT computational study.

    PubMed

    Ohta, Takehiro; Nagaraju, Perumandla; Liu, Jin-Gang; Ogura, Takashi; Naruta, Yoshinori

    2016-09-01

    Oxygen reduction reaction (ORR) catalyzed by a bio-inspired iron porphyrin bearing a hanging carboxylic acid group over the porphyrin ring, and a tethered axial imidazole ligand was studied by DFT calculations. BP86 free energy calculations of the redox potentials and pK a's of reaction components involved in the proton coupled electron transfer (PCET) reactions of the ferric-hydroxo and -superoxo complexes were performed based on Born-Haber thermodynamic cycle in conjunction with a continuum solvation model. The comparison was made with iron porphyrins that lack either in the hanging acid group or axial ligand, suggesting that H-bond interaction between the carboxylic acid and iron-bound hydroxo, aquo, superoxo, and peroxo ligands (de)stabilizes the Fe-O bonding, resulting in the increase in the reduction potential of the ferric complexes. The axial ligand interaction with the imidazole raises the affinity of the iron-bound superoxo and peroxo ligands for proton. In addition, a low-spin end-on ferric-hydroperoxo intermediate, a key precursor for O-O cleavage, can be stabilized in the presence of axial ligation. Thus, selective and efficient ORR of iron porphyrin can be achieved with the aid of the secondary coordination sphere and axial ligand interactions.

  5. Synthesis, structure characterization and biological activity of selected metal complexes of sulfonamide Schiff base as a primary ligand and some mixed ligand complexes with glycine as a secondary ligand

    NASA Astrophysics Data System (ADS)

    Sharaby, Carmen M.; Amine, Mona F.; Hamed, Asmaa A.

    2017-04-01

    The current work reports synthesis of metal complexes and mixed ligand complexes of a novel sulfonamide Schiff base ligand (HL) resulted from the condensation of sulfametrole [N‧-(4-methoxy-1,2,5-thiadiazol-3-yl]sulfanilamide and acetyl-acetone as a primary ligand and glycine as a secondary ligand. The metal complexes and mixed ligand complexes of HL Schiff base ligand were synthesized and characterized using different physicochemical studies as elemental analyses, mass spectra, conductivity measurement, IR spectra, 1H NMR spectra, UV-vis Spectra, solid reflectance, magnetic susceptibility, thermal analyses (TGA and DTA) and their microbial and anticancer activities. The spectroscopic data of the complexes suggest their 1:2(L1:M) complex structures and 1:2:2(L1:L2:M) mixed ligand complex structures, where L1 = HL and L2 = glycine. Also, the spectroscopic studies suggested the octahedral structure for all complexes. The synthesized Schiff base, its metal and mixed ligand complexes were screened for their bacterial, antifungal and anticancer activity. The activity data show that the metal complexes and mixed ligand complexes exhibited promising microbial and anticancer activities than their parent HL Schiff base ligand, also the data show that the mixed ligand complexes more effective than the metal complexes.

  6. Binding constant determination of high-affinity protein-ligand complexes by electrospray ionization mass spectrometry and ligand competition.

    PubMed

    Wortmann, Arno; Jecklin, Matthias C; Touboul, David; Badertscher, Martin; Zenobi, Renato

    2008-05-01

    We describe an approach for the determination of binding constants for protein-ligand complexes with electrospray ionization mass spectrometry, based on the observation of unbound ligands competing for binding to a protein target. For the first time, dissociation constants lower than picomolar could be determined with good accuracy by electrospray ionization mass spectrometry. The presented methodology relies only on the determination of signal intensity ratios for free ligands in the low mass region. Therefore, all the advantages of measuring low masses with mass spectrometry, such as high resolution are preserved. By using a reference ligand with known binding affinity, the affinity of a second ligand can be determined. Since no noncovalently bound species are observed, assumptions about response factors are not necessary. The method is validated with ligands binding to avidin and applied to ligands binding to p38 mitogen-activated protein kinase.

  7. Phototoxicity of strained Ru(ii) complexes: is it the metal complex or the dissociating ligand?

    PubMed

    Azar, Daniel F; Audi, Hassib; Farhat, Stephanie; El-Sibai, Mirvat; Abi-Habib, Ralph J; Khnayzer, Rony S

    2017-09-12

    A photochemically dissociating ligand in Ru(bpy)2(dmphen)Cl2 [bpy = 2,2'-bipyridine; dmphen = 2,9-dimethyl-1,10-phenanthroline] was found to be more cytotoxic on the ML-2 Acute Myeloid Leukemia cell line than Ru(bpy)2(H2O)2(2+) and prototypical cisplatin. Our findings illustrate the potential potency of diimine ligands in photoactivatable Ru(ii) complexes.

  8. Catalytic hydrogenation using complexes of base metals with tridentate ligands

    DOEpatents

    Hanson, Susan K.; Zhang, Guoqi; Vasudevan, Kalyan V.

    2017-02-14

    Complexes of cobalt and nickel with tridentate ligand PNHP.sup.R are effective for hydrogenation of unsaturated compounds. Cobalt complex [(PNHP.sup.Cy)Co(CH.sub.2SiMe.sub.3)]BAr.sup.F.sub.4 (PNHP.sup.Cy=bis[2-(dicyclohexylphosphino)ethyl]amine, BAr.sup.F.sub.4=B(3,5-(CF.sub.3).sub.2C.sub.6H.sub.3).sub.4)) was prepared and used with hydrogen for hydrogenation of alkenes, aldehydes, ketones, and imines under mild conditions (25-60.degree. C., 1-4 atm H.sub.2). Nickel complex [(PNHP.sup.Cy)Ni(H)]BPh.sub.4 was used for hydrogenation of styrene and 1-octene under mild conditions. (PNP.sup.Cy)Ni(H) was used for hydrogenating alkenes.

  9. Catalytic hydrogenation using complexes of base metals with tridentate ligands

    DOEpatents

    Vasudevan, Kalyan V.; Zhang, Guoqi; Hanson, Susan K.

    2016-09-06

    Complexes of cobalt and nickel with tridentate ligand PNHP.sup.R are effective for hydrogenation of unsaturated compounds. Cobalt complex [(PNHP.sup.Cy)Co(CH.sub.2SiMe.sub.3)]BAr.sup.F.sub.4 (PNHP.sup.Cy=bis[2-(dicyclohexylphosphino)ethyl]amine, BAr.sup.F.sub.4=B(3,5-(CF.sub.3).sub.2C.sub.6H.sub.3).sub.4)) was prepared and used with hydrogen for hydrogenation of alkenes, aldehydes, ketones, and imines under mild conditions (25-60.degree. C., 1-4 atm H.sub.2). Nickel complex [(PNHP.sup.Cy)Ni(H)]BPh.sub.4 was used for hydrogenation of styrene and 1-octene under mild conditions. (PNP.sup.Cy)Ni(H) was used for hydrogenating alkenes.

  10. Yttrium Complexes of Arsine, Arsenide, and Arsinidene Ligands**

    PubMed Central

    Pugh, Thomas; Kerridge, Andrew; Layfield, Richard A

    2015-01-01

    Deprotonation of the yttrium–arsine complex [Cp′3Y{As(H)2Mes}] (1) (Cp′=η5-C5H4Me, Mes=mesityl) by nBuLi produces the μ-arsenide complex [{Cp′2Y[μ-As(H)Mes]}3] (2). Deprotonation of the As–H bonds in 2 by nBuLi produces [Li(thf)4]2[{Cp′2Y(μ3-AsMes)}3Li], [Li(thf)4]2[3], in which the dianion 3 contains the first example of an arsinidene ligand in rare-earth metal chemistry. The molecular structures of the arsine, arsenide, and arsinidene complexes are described, and the yttrium–arsenic bonding is analyzed by density functional theory. PMID:25655652

  11. Complexation of heterocyclic ligands with DNA in aqueous solution

    NASA Astrophysics Data System (ADS)

    Baranovskii, S. F.; Bolotin, P. A.; Evstigneev, M. P.; Chernyshev, D. N.

    2008-03-01

    We have used spectrophotometry to study self-association and complexation with DNA by organic heterocyclic compounds in the acridine and phenothiazine series: proflavin, thionine, and methylene blue. Based on the experimental concentration dependences of the molar absorption coefficient of the molecules in an aqueous buffer solution (0.01 M NaCl, 0.01 M Na2EDTA, 0.01 M Tris, pH 7.4, T = 298 K), we have determined the equilibrium dimerization constants for the dyes and the DNA complexation parameters using the Scatchard and McGhee-von Hippel models. The observed increase in the cooperativity parameters as the dimerization constants of the ligands increase allowed us to hypothesize that the same interactions occur between dye molecules adsorbed on DNA as in their self-association. The equilibrium DNA-binding constants for the ligands, obtained using the McGhee-von Hippel cooperative model, are (20.9 ± 2.7)·103 M-1 for proflavin and (33.8 ± 4.1)·103 M-1 for thionine. Using the Scatchard model, taking into account intercalation and “external” binding of ligands with DNA, we determined the DNA complexation constants for methylene blue: (26.4 ± 4.6)·103 and (96 ± 17)·103 M-1 respectively. Based on analysis of the data obtained, we hypothesized that the predominant type of binding with DNA is intercalation binding in the case of proflavin and thionine, and “external” binding with the DNA surface in the case of methylene blue.

  12. Regioselectivity in ligand substitution reactions on diiron complexes governed by nucleophilic and electrophilic ligand properties.

    PubMed

    Bethel, Ryan D; Crouthers, Danielle J; Hsieh, Chung-Hung; Denny, Jason A; Hall, Michael B; Darensbourg, Marcetta Y

    2015-04-06

    The discovery of a diiron organometallic site in nature within the diiron hydrogenase, [FeFe]-H2ase, active site has prompted revisits of the classic organometallic chemistry involving the Fe-Fe bond and bridging ligands, particularly of the (μ-SCH2XCH2S)[Fe(CO)3]2 and (μ-SCH2XCH2S)[Fe(CO)2L]2 (X = CH2, NH; L = PMe3, CN(-), and NHC's (NHC = N-heterocyclic carbene)), derived from CO/L exchange reactions. Through the synergy of synthetic chemistry and density functional theory computations, the regioselectivity of nucleophilic (PMe3 or CN(-)) and electrophilic (nitrosonium, NO(+)) ligand substitution on the diiron dithiolate framework of the (μ-pdt)[Fe(CO)2NHC][Fe(CO)3] complex (pdt = propanedithiolate) reveals the electron density shifts in the diiron core of such complexes that mimic the [FeFe]-H2ase active site. While CO substitution by PMe3, followed by reaction with NO(+), produces (μ-pdt)(μ-CO)[Fe(NHC)(NO)][Fe(CO)2PMe3](+), the alternate order of reagent addition produces the structural isomer (μ-pdt)[Fe(NHC)(NO)PMe3][Fe(CO)3](+), illustrating how the nucleophile and electrophile choose the electron-poor metal and the electron-rich metal, respectively. Theoretical explorations of simpler analogues, (μ-pdt)[Fe(CO)2CN][Fe(CO)3](-), (μ-pdt)[Fe(CO)3]2, and (μ-pdt)[Fe(CO)2NO][Fe(CO)3](+), provide an explanation for the role that the electron-rich iron moiety plays in inducing the rotation of the electron-poor iron moiety to produce a bridging CO ligand, a key factor in stabilizing the electron-rich iron moiety and for support of the rotated structure as found in the enzyme active site.

  13. Stereochemistry of lead(II) complexes with oxygen donor ligands.

    SciTech Connect

    Stavilla, Vitalie; Davidovich, Ruven L.; Whitmire, Kenton Herbert; Voit, Elena I.; Marinin, Dmitry V.

    2008-10-01

    This review discusses the coordination number (CN) and the coordination geometry of the first coordination sphere of Pb(II) atoms in crystal structures of 98 lead(II) complexes with O-donor ligands and the stereochemically active lone pair of electrons (LP, E) in the terms of the valence shell electron-pair repulsion (VSEPR) model. The CN of Pb(II) atoms of the first coordination sphere has values falling into the range (3 + E) to (6 + E). The following coordination polyhedra-{psi}-tetrahedron (I), {psi}-trigonal bipyramid (II), {psi}-octahedron (III), {psi}-pentagonal bipyramid with an axial (IV) or equatorial (V) vacant position are formed. For the investigated structures of the Pb(II) complexes, the formula of each compound, the overall CN of the Pb(II) atom considered as the sum of the CN in the first coordination sphere and the number of secondary bonds, the polyhedron shape, the Pb-O bond lengths, and O-Pb-O bond angles in the first coordination sphere, secondary bond lengths, references and REFCODEs are presented in the comprehensive Tables. The quantum chemical investigations performed using density functional theory (DFT) method have confirmed the stereochemical activity of the LP of Pb(II) atoms in the studied structures of lead(II) complexes with O-donor ligands.

  14. Controlling diabetes by chromium complexes: The role of the ligands.

    PubMed

    Peng, Mei; Yang, Xiaoping

    2015-05-01

    Diabetes, particularly type II diabetes, is a severe disease condition which affects human health worldwide, with a dramatically increasing trend in Asian countries including China. Currently, no efficient drugs other than those with observable side effects are available. Chromium complexes, with the most known representative chromium picolinate, have been listed as one of most attractive health supplements to attenuate this disease condition in western countries. Recent efforts have been made to develop new chromium complexes with novel ligands. Although fair amounts of reviews have been published to emphasize the biological activity, preclinical and clinical information of chromium picolinate, this mini-review is trying to cover the entire picture of updated research efforts on various chromium complexes highlighting the role of ligands. Chromium phenylalanine sensitizes insulin cell signaling pathway via the activation of phosphorylation of Akt (protein kinase B (PKB)) and/or AMPK (AMP-activated protein kinase). The biological activities, toxicity, pharmacological features and clinical implications, including the effect of anti-oxidative capacities, protective effect on obese-induced heart dysfunction, and efficacy and safety of chromium supplementation in diabetes are discussed as well.

  15. Two dimensional heteronuclear complexes with cyanide and 4-aminomethylpyridine ligands

    NASA Astrophysics Data System (ADS)

    Karaağaç, Dursun; Kürkçüoğlu, Güneş Süheyla; Yeşilel, Okan Zafer; MuratTaş

    2014-09-01

    Two new cyano-bridged two-dimensional heteronuclear complexes, [Cd(NH3)2(μ-ampy)Ni(μ-CN)2(CN)2]n (1) and [Cd(H2O)2(μ-ampy)Pt(μ-CN)2(CN)2]n (2) (ampy = 4-aminomethylpyridine), were synthesized and characterized by FT-IR and Raman spectroscopic, thermal (TG, DTG and DTA) and elemental analyses and single crystal X-ray diffraction techniques. They crystallize in the triclinic system and P-1 space group. The Ni(II) or Pt(II) ions are four coordinate with four cyanide-carbon atoms in a square planar geometry and the Cd(II) ion exhibits a distorted octahedral coordination by two different N-atoms from two symmetrically equivalent ampy ligands, two ammine or aqua ligands and two bridging cyano groups.The most important features of the complexes are the presence of obvious M⋯π (M = Ni(II) or Pt(II)) interactions.

  16. Reactivity of halide and pseudohalide ligands in transition-metal complexes

    SciTech Connect

    Kukushkin, Yu.N.; Kukushkin, V.Yu.

    1985-10-01

    The experimental material on the reactions of coordinated halide ligands, as well as cyanide, azido, thiocyanato, and cyanato ligands, in transition-metal complexes has been generalized in this review.

  17. A sandwich-type triple-decker lanthanide complex with mixed phthalocyanine and Schiff base ligands.

    PubMed

    Gao, Feng; Li, Yu-Yang; Liu, Cai-Ming; Li, Yi-Zhi; Zuo, Jing-Lin

    2013-08-21

    A new triple-decker dinuclear sandwich-type dysprosium complex based on both the phthalocyanine ligand and the tetradentate Schiff base ligand was synthesized, which is of interest for synthetic chemistry and also shows single-molecule magnetic behaviour.

  18. Photo- and electroluminescent properties europium complexes using bistriazole ligands

    PubMed Central

    Gusev, Alexey N.; Shul’gin, Victor F.; Nishimenko, Galina; Hasegawa, Miki; Linert, Wolfgang

    2013-01-01

    Luminescent properties of two heteroleptic dibenzoylmethanate europium(III) complexes with 1,3-bis(5-pyridin-2-yl-1,2,4-triazol-3-yl)propane (H2L1) and 1,4-bis(5-pyridin-2-yl-1,2,4-triazol-3-yl)butane (H2L2) as ancillary ligands are described. The two double-layer-type electroluminescent cells with the structures: (1) ITO/NPB(40 nm)/Eu(DBM)2HL1 (40 nm)/LiF (1 nm)/Al (100 nm) and (2) ITO/NPB(40 nm)/Eu(DBM)2HL2 (40 nm)/LiF (1 nm)/Al (100 nm) emit red light originating from the europium complexes. The device 2 gives the maximum brightness of 455 cd/m2 at 19.2 V. PMID:23459422

  19. Complexation of trivalent americium and lanthanides with terdentate 'N' donor ligands: the role of rigidity in the ligand structure.

    PubMed

    Bhattacharyya, Arunasis; Gadly, Trilochan; Pathak, Priyanath; Ghosh, Sunil K; Mohapatra, Manoj; Ghanty, Tapan K; Mohapatra, Prasanta K

    2014-08-28

    A systematic study on the Ln(3+) complexation behaviour with two terdentate 'N' donor ligands of varying structural rigidity, viz. 5,6-dimethyl-(1,2,4)-triazinylbipyridine (Me2TBipy) and 5,6-dimethyl-(1,2,4)-triazinylphenanthroline (Me2TPhen), is performed in the present work by UV-Vis spectrophotometry, time resolved fluorescence spectroscopy (TRFS) and electrospray ionization mass spectrometric (ESI-MS) studies. These studies indicate the formation of a 1 : 1 complex of La(3+), 1 : 2 complexes of Eu(3+) and Er(3+) with both the ligands. Density functional theoretical (DFT) study is carried out to determine the solution phase structure of the Eu(3+) complex considering the species (from UV-Vis spectrophotometry) and C2v site symmetry around the Eu(3+) ion (from TRFS study). Me2TPhen is found to be a stronger complexing ligand as compared to Me2TBipy irrespective of the Ln(3+) ions. The solid state crystal structure of the La(3+) complex of Me2TPhen is determined using the single crystal X-ray diffraction (SCXRD) technique. The complexation of the trivalent Am(3+) ion is also studied with both these ligands using UV-Vis spectrophotometric titrations which show the formation of 1 : 2 complexes with higher complexation constant values as compared to all the Ln(3+) ions studied, indicating the selectivity of these ligands for the trivalent actinides over the lanthanides.

  20. Mass Spectrometry of Protein-Ligand Complexes: Enhanced Gas Phase Stability of Ribonuclease-Nucleotide Complexes

    PubMed Central

    Yin, Sheng; Xie, Yongming; Loo, Joseph A.

    2008-01-01

    Noncovalent protein-ligand complexes are readily detected by electrospray ionization mass spectrometry (ESI-MS). Ligand binding stoichiometry can be determined easily by the ESI-MS method. The ability to detect noncovalent protein-ligand complexes depends, however, on the stability of the complexes in the gas phase environment. Solution binding affinities may or may not be accurate predictors of their stability in vacuo. Complexes composed of cytidine nucleotides bound to ribonuclease A (RNase A) and ribonuclease S (RNase S) were detected by ESI-MS and were further analyzed by MS/MS. RNase A and RNase S share similar structures and biological activity. Subtilisin-cleavage of RNase A yields an S-peptide and an S-protein; the S-peptide and S-protein interact through hydrophobic interactions with a solution binding constant in the nanomolar range to generate an active RNase S. Cytidine nucleotides bind to the ribonucleases through electrostatic interactions with a solution binding constant in the micromolar range. Collisionally activated dissociation (CAD) of the 1:1 RNase A-CDP and CTP complexes yields cleavage of the covalent phosphate bonds of the nucleotide ligands, releasing CMP from the complex. CAD of the RNase S-CDP and CTP complexes dissociates the S-peptide from the remaining S-protein/nucleotide complex; further dissociation of the S-protein/nucleotide complex fragments a covalent phosphate bond of the nucleotide with subsequent release of CMP. Despite a solution binding constant favoring the S-protein/S-peptide complex, CDP/CTP remains electrostatically bound to the S-protein in the gas phase dissociation experiment. This study highlights the intrinsic stability of electrostatic interactions in the gas phase and the significant differences in solution and gas phase stabilities of noncovalent complexes that can result. PMID:18565758

  1. EXAFS Studies of Some Copper(II) Mixed-Ligand Complexes

    SciTech Connect

    Joshi, S. K.; Katare, R. K.; Shrivastava, B. D.

    2007-02-02

    X-ray K-absorption spectroscopic studies have been carried out on copper (II) mixed-ligand complexes with glutamic acid and aspartic acid as the primary ligands, where as water, pyridine, imidazole and benz-imidazole have been used as secondary ligands. Chemical shifts obtained from the X-ray absorption data have indicated that the glutamic acid complexes are more ionic as compared to their corresponding aspartic acid complexes having similar secondary ligands. Further, we have estimated the average metal-ligand bond distances from the from structure data. For the different complexes studied under the present investigation, the studies reveal that the bonding parameter {alpha}1 decreases with the increase in the percentage covalency of the metal-ligand bond. Thus, the bonding parameter {alpha}1 may be used for the estimation of percentage covalency of the metal-ligand bond in other similar complexes.

  2. Water oxidation by Ruthenium complexes incorporating multifunctional biipyridyl diphosphonate ligands

    DOE PAGES

    Xie, Yan; Shaffer, David W.; Lewandowska-Andralojc, Anna; ...

    2016-05-11

    Here, we describe herein the synthesis and characterization of ruthenium complexes with multifunctional bipyridyl diphosphonate ligands as well as initial water oxidation studies. In these complexes, the phosphonate groups provide redox-potential leveling through charge compensation and σ donation to allow facile access to high oxidation states. These complexes display unique pH-dependent electrochemistry associated with deprotonation of the phosphonic acid groups. The position of these groups allows them to shuttle protons in and out of the catalytic site and reduce activation barriers. A mechanism for water oxidation by these catalysts is proposed on the basis of experimental results and DFT calculations.more » The unprecedented attack of water at a neutral six-coordinate [RuIV] center to yield an anionic seven-coordinate [RuIV–OH]– intermediate is one of the key steps of a single-site mechanism in which all species are anionic or neutral. These complexes are among the fastest single-site catalysts reported to date.« less

  3. Water oxidation by Ruthenium complexes incorporating multifunctional biipyridyl diphosphonate ligands

    SciTech Connect

    Xie, Yan; Shaffer, David W.; Lewandowska-Andralojc, Anna; Szalda, David J.; Concepcion, Javier J.

    2016-05-11

    Here, we describe herein the synthesis and characterization of ruthenium complexes with multifunctional bipyridyl diphosphonate ligands as well as initial water oxidation studies. In these complexes, the phosphonate groups provide redox-potential leveling through charge compensation and σ donation to allow facile access to high oxidation states. These complexes display unique pH-dependent electrochemistry associated with deprotonation of the phosphonic acid groups. The position of these groups allows them to shuttle protons in and out of the catalytic site and reduce activation barriers. A mechanism for water oxidation by these catalysts is proposed on the basis of experimental results and DFT calculations. The unprecedented attack of water at a neutral six-coordinate [RuIV] center to yield an anionic seven-coordinate [RuIV–OH] intermediate is one of the key steps of a single-site mechanism in which all species are anionic or neutral. These complexes are among the fastest single-site catalysts reported to date.

  4. Water oxidation by Ruthenium complexes incorporating multifunctional biipyridyl diphosphonate ligands

    SciTech Connect

    Xie, Yan; Shaffer, David W.; Lewandowska-Andralojc, Anna; Szalda, David J.; Concepcion, Javier J.

    2016-05-11

    Here, we describe herein the synthesis and characterization of ruthenium complexes with multifunctional bipyridyl diphosphonate ligands as well as initial water oxidation studies. In these complexes, the phosphonate groups provide redox-potential leveling through charge compensation and σ donation to allow facile access to high oxidation states. These complexes display unique pH-dependent electrochemistry associated with deprotonation of the phosphonic acid groups. The position of these groups allows them to shuttle protons in and out of the catalytic site and reduce activation barriers. A mechanism for water oxidation by these catalysts is proposed on the basis of experimental results and DFT calculations. The unprecedented attack of water at a neutral six-coordinate [RuIV] center to yield an anionic seven-coordinate [RuIV–OH] intermediate is one of the key steps of a single-site mechanism in which all species are anionic or neutral. These complexes are among the fastest single-site catalysts reported to date.

  5. Novel multidentate sulfur-nitrogen ligands with enhanced complexation properties.

    PubMed

    Meinholz, Margret M; Klemmer, Maika; Kriemen, Ella; Stalke, Dietmar

    2011-08-16

    Di(tert-butyl)sulfur diimide and bis(trimethylsilyl)sulfur diimide were reacted with different metalated amines to form versatile novel multidentate ligand systems with side-arm donation. Their complexation properties in terms of ligand design, denticity and the cation size are discussed. We report herein the synthesis and structure elucidation of [(tBuN)(2)S{LiMe(2)N(C(6)H(4))S(NtBu)(2)}(2)] (1), [(Li{Me(2)N(C(6)H(4))S(NSiMe(3))(2)})(2)] (2), [(Li(thf){Me(2)N(C(6)H(4))S(NSiMe(3))(2)})(2)] (3), [(Li{2-PicS(NSiMe(3))(2)})(2)] (4), [(Li{Me(2)N(CH(2))(2)N(Me)S(NSiMe(3))(2)})(2)] (5), [(Na{Me(2)N(CH(2))(2)N(Me)S(NSiMe(3))(2)})(2)] (6) and [(K{Me(2)N(C(6)H(4))S(NSiMe(3))(2)})(2)] (7). Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  6. Two lanthanide-hydroxo clusters with different nuclearity: Synthesis, structures, luminescent and magnetic properties

    NASA Astrophysics Data System (ADS)

    Li, Xi-Li; Zhu, Cancan; Zhang, Xue-Li; Hu, Ming; Wang, Ai-Ling; Xiao, Hong-Ping

    2017-01-01

    Under the identical reaction conditions, two new TbIII and SmIII-hydroxo clusters with different nuclearity have been prepared and characterized by X-ray crystallography, spectroscopic methods and magnetic measurements. Solid-state structure analyses reveal that the TbIII cluster shows a pentanuclear square pyramidal shape of the composition [Tb5(μ3-OH)4(μ4-OH)(dbm)10]·2H2O (1, dbm- = dibenzoylmethanate) with the dbm ligands presenting two types of coordination modes [η2-and (μ-O)-η2-]. The SmIII species presents a tetranuclear parallelogram structure formulated as [Sm4(μ3-OH)2(dbm)10]·12H2O (2), and three types of coordination modes [η2-, (μ-O)-η2- and (μ-O)2-η2-] for dbm ligands are observed. The measurements of magnetic properties indicate that the direct-current (dc) magnetic behaviors of two clusters mainly result from the thermal depopulation of the Stark sublevels of the TbIII and SmIII ions, respectively. Meanwhile, alternating current (ac) magnetic susceptibility of 1 is also assessed. Investigations on luminescence properties show that 2 displays characteristic emission of the SmIII ion in visible range, while 1 does not exhibit any detectable emission. The interpretations of different emission behaviors for 1 and 2 are also presented in detail.

  7. Electronic spectra and photophysics of platinum(II) complexes with alpha-diimine ligands - Solid-state effects. I - Monomers and ligand pi dimers

    NASA Technical Reports Server (NTRS)

    Miskowski, Vincent M.; Houlding, Virginia H.

    1989-01-01

    Two types of emission behavior for Pt(II) complexes containing alpha-diimine ligands have been observed in dilute solution. If the complex also has weak field ligands such as chloride, ligand field (d-d) excited states become the lowest energy excited states. If only strong field ligands are present, a diimine 3(pi-pi/asterisk/) state becomes the lowest. In none of the cases studied did metal-to-ligand charge transfer excited state lie lowest.

  8. Radiochemical studies of 99mTc complexes of modified cysteine ligands and bifunctional chelating agents.

    PubMed

    Pillai, M R; Kothari, K; Banerjee, S; Samuel, G; Suresh, M; Sarma, H D; Jurisson, S

    1999-07-01

    The synthesis of four novel ligands using the amino-acid cysteine and its ethyl carboxylate derivative is described. The synthetic method involves a two-step procedure, wherein the intermediate Schiff base formed by the condensation of the amino group of the cysteine substrate and salicylaldehyde is reduced to give the target ligands. The intermediates and the final products were characterized by high resolution nuclear magnetic resonance spectroscopy. Complexation studies of the ligands with 99mTc were optimized using stannous tartrate as the reducing agent under varying reaction conditions. The complexes were characterized using standard quality control techniques such as thin layer chromatography, paper electrophoresis, and paper chromatography. Lipophilicities of the complexes were estimated by solvent extraction into chloroform. Substantial changes in net charge and lipophilicity of the 99mTc complexes were observed on substituting the carboxylic acid functionality in ligands I and II with the ethyl carboxylate groups (ligands II and IV). All the ligands formed 99mTc complexes in high yield. Whereas the complexes with ligands I and II were observed to be hydrophilic in nature and not extractable into CHCl3, ligands III and IV resulted in neutral and lipophilic 99mTc complexes. The 99mTc complex with ligand II was not stable and on storage formed a hydrophilic and nonextractable species. The biodistribution of the complexes of ligands I and II showed that they cleared predominantly through the kidneys, whereas the complexes with ligands III and IV were excreted primarily through the hepatobiliary system. No significant brain uptake was observed with the 99mTc complexes with ligands III and IV despite their favorable properties of neutrality, lipophilicity, and conversion into a hydrophilic species. These ligands offer potential for use as bifunctional chelating agents.

  9. Solution NMR Structure of a Ligand/Hybrid-2-G-Quadruplex Complex Reveals Rearrangements that Affect Ligand Binding.

    PubMed

    Wirmer-Bartoschek, Julia; Bendel, Lars Erik; Jonker, Hendrik R A; Grün, J Tassilo; Papi, Francesco; Bazzicalupi, Carla; Messori, Luigi; Gratteri, Paola; Schwalbe, Harald

    2017-06-12

    Telomeric G-quadruplexes have recently emerged as drug targets in cancer research. Herein, we present the first NMR structure of a telomeric DNA G-quadruplex that adopts the biologically relevant hybrid-2 conformation in a ligand-bound state. We solved the complex with a metalorganic gold(III) ligand that stabilizes G-quadruplexes. Analysis of the free and bound structures reveals structural changes in the capping region of the G-quadruplex. The ligand is sandwiched between one terminal G-tetrad and a flanking nucleotide. This complex structure involves a major structural rearrangement compared to the free G-quadruplex structure as observed for other G-quadruplexes in different conformations, invalidating simple docking approaches to ligand-G-quadruplex structure determination. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  10. DNA Interactions with Ruthenium(ll) Polypyridine Complexes Containing Asymmetric Ligands

    PubMed Central

    Chao, Hui

    2005-01-01

    In an attempt to probe nucleic acid structures, numerous Ru(II) complexes with different ligands have been synthesized and investigated. In this contribution we focus on the DNA-binding properties of ruthenium(II) complexes containing asymmetric ligands that have attracted little attention in the past decades. The influences of the shape and size of the ligand on the binding modes, affinity, enantioselectivities and photocleavage of the complexes to DNA are described. PMID:18365086

  11. Synthesis, structure and reactivity of rare-earth metal complexes containing anionic phosphorus ligands.

    PubMed

    Li, Tianshu; Kaercher, Sabrina; Roesky, Peter W

    2014-01-07

    A comprehensive review of structurally characterized rare-earth metal complexes containing anionic phosphorus ligands is presented. Since rare-earth elements form hard ions and phosphorus is considered as a soft ligand, the rare-earth metal phosphorus coordination is regarded as a less favorite combination. Three classes of phosphorus ligands, (1) the monoanionic organophosphide ligands (PR2(-)) bearing one negative charge on the phosphorus atom; (2) the dianionic phosphinidene (PR(2-)) and P(3-) ligands; and (3) the pure inorganic polyphosphide ligands (Pn(x-)), are included here. Particular attention has been paid to the synthesis, structure, and reactivity of the rare-earth metal phosphides.

  12. Sulfur containing platinum(II) complexes with N-heterocyclic carbene ligands obtained by reactions of a hydrosulfido complex.

    PubMed

    Maeda, Yuri; Hashimoto, Hideki; Nishioka, Takanori

    2012-10-21

    A hydrosulfido platinum(ii) complex with a chelated N-heterocyclic carbene (NHC) ligand was oxidised with O(2) in the presence of excess hydrogen sulfide, to give a linear tetrasulfido complex, and without hydrogen sulfide, to give a thiosulfato-bridged dinuclear complex. The hydrosulfido complex also reacted with an acetato complex containing the chelating NHC platinum unit to afford a trinuclear platinum complex with two triply bridging sulfido ligands showing an equilibrium in solution between two isomers based on the arrangement of the chelating NHC ligands.

  13. Multimetallic complexes based on a diphosphine-dithiocarbamate "Janus" ligand.

    PubMed

    Sherwood, Rebecca; Gonzàlez de Rivera, Ferran; Wan, Jane Hui; Zhang, Qi; White, Andrew J P; Rossell, Oriol; Hogarth, Graeme; Wilton-Ely, James D E T

    2015-05-04

    The HCl salt of the aminodiphosphine ligand HN(CH2CH2PPh2)2 reacts with [M(CO)4(pip)2] (M = Mo, W; pip = piperidine) to yield [M{κ(2)-HN(CH2CH2PPh2)2}(CO)4]. The molybdenum analogue readily loses a carbonyl ligand to form [Mo{κ(3)-HN(CH2CH2PPh2)2}(CO)3], which was structurally characterized. The same ligand backbone is used to form the new bifunctional ligand, KS2CN(CH2CH2PPh2)2, which reacts with nickel and cobalt precursors to yield [Ni{S2CN(CH2CH2PPh2)2}2] and [Co{S2CN(CH2CH2PPh2)2}3]. Addition of [AuCl(tht)] (tht = tetrahydrothiophene) to [Ni{S2CN(CH2CH2PPh2)2}2] leads to formation of the pentametallic complex, [Ni{S2CN(CH2CH2PPh2AuCl)2}2]. In contrast, addition of [PdCl2(py)2] (py = pyridine) to [Ni{S2CN(CH2CH2PPh2)2}2] does not lead to a trimetallic complex but instead yields the transmetalated cyclic compound [Pd{S2CN(CH2CH2PPh2)2}]2, which was structurally characterized. The same product is obtained directly from [PdCl2(py)2] and KS2CN(CH2CH2PPh2)2. In contrast, the same reaction with [PtCl2(NCPh)2] yields the oligomer, [Pt{S2CN(CH2CH2PPh2)2}]n. Reaction of KS2CN(CH2CH2PPh2)2 with cis-[RuCl2(dppm)2] provides [Ru{S2CN(CH2CH2PPh2)2}(dppm)2](+), which reacts with [AuCl(tht)] to yield [Ru{S2CN(CH2CH2PPh2AuCl)2}(dppm)2](+). Addition of [M(CO)4(pip)2] (M = Mo, W) to the same precursor leads to formation of the bimetallic compounds [(dppm)2Ru{S2CN(CH2CH2PPh2)2}M(CO)4](+), while treatment with [ReCl(CO)5] yields [(dppm)2Ru{S2CN(CH2CH2PPh2)2}ReCl(CO)3](+). Reaction of KS2CN(CH2CH2PPh2)2 with [Os(CH═CHC6H4Me-4)Cl(CO)(BTD)(PPh3)2] (BTD = 2,1,3-benzothiadiazole) provides [Os(CH═CHC6H4Me-4){S2CN(CH2CH2PPh2)2}(CO)(PPh3)2], but reaction with the analogous ruthenium precursor fails to yield a clean product.

  14. Lithium, titanium, and zirconium complexes with novel amidinate scorpionate ligands.

    PubMed

    Otero, Antonio; Fernandez-Baeza, Juan; Antiñolo, Antonio; Tejeda, Juan; Lara-Sanchez, Agustín; Sanchez-Barba, Luis F; López-Solera, Isabel; Rodríguez, Ana M

    2007-03-05

    The reaction of bis(3,5-dimethylpyrazol-1-yl)methane (bdmpzm) with BunLi and carbodiimide derivatives, namely, N,N'-diisopropyl, dicyclohexyl, and 1-tert-butyl-3-ethyl carbodiimides, enables the preparation of new heteroscorpionate ligands in the form of the lithium derivatives [Li(NNN)(THF)] (NNN = pbpamd (1) (pbpamd = N,N'-diisopropylbis(3,5-dimethylpyrazol-1-yl)acetamidinate); cbpamd (2) (cbpamd = N,N'-dicyclohexylbis(3,5-dimethylpyrazol-1-yl)acetamidinate); and tbpamd (3) (tbpamd = N-ethyl-N'-tert-butylbis(3,5-dimethylpyrazol-1-yl)acetamidinate)), although a similar process with N,N'-dimethylcarbodiimide gave the dinuclear complex [Li(bpzii)(THF)]2 (4) (bpzii = N-(dimethylamino)-N'-[(dimethylamino)bis(3,5-dimethylpyrazol-1-yl)methylimino]imino). When this last reaction was carried out in an air atmosphere, the cluster complex [Li8(mu4-O)2(mu4-OH)2(mu4-pz)2(kappa2-bpziLi)2(bpzCN)2(THF)4] (5) (bpziLi = dimethylaminobis(3,5-dimethylpyrazol-1-yl)methyliminolithium, bpzCN = bis(3,5-dimethylpyrazol-1-yl)acetonitrile) was isolated and characterized by X-ray analysis. Finally, when the same process was carried out in the presence of water the amidine-scorpionate (bpzan) (6) (bpzan = N,N-dimethylbis(3,5-dimethylpyrazol-1-yl)acetamidine) was obtained. Compounds 1 and 3 reacted with [TiCl4(THF)2] or [ZrCl4] to give complexes of stoichiometry [MCl3((kappa3-NNN))] (M = Ti, Zr) (7-10). The structures of the different compounds were determined by spectroscopic methods and, in addition, the X-ray crystal structures of 1, 3, 4, 5, and 6 were also established.

  15. IR and ESR studies on novel Cu(II) theophyllinato complexes containing mono- or bidentate ligands

    NASA Astrophysics Data System (ADS)

    Forizs, Edit; David, L.; Cozar, O.; Chiş, V.; Damian, G.; Csibi, Jolán

    1999-05-01

    Three mixed-ligand copper(II) complexes containing theophylline and mono- or bidentate N-donor ligands (2,2'-bipyridine, 4-fluoraniline and 1,10-phenanthroline) were synthesized and characterized by elemental analysis, IR and ESR spectra. According to IR and ESR data the Cu(II) complexes exhibit a distorted tetrahedral coordination of copper by two nitrogen atoms of the monodentate or bidentate ligands and the two monodentate theophyllinate anion bonded through N(7) atom.

  16. Catalytic dioxygen activation by Co(II) complexes employing a coordinatively versatile ligand scaffold.

    PubMed

    Sharma, Savita K; May, Philip S; Jones, Matthew B; Lense, Sheri; Hardcastle, Kenneth I; MacBeth, Cora E

    2011-02-14

    The ligand bis(2-isobutyrylamidophenyl)amine has been prepared and used to stabilize both mononuclear and dinuclear cobalt(II) complexes. The nuclearity of the cobalt product is regulated by the deprotonation state of the ligand. Both complexes catalytically oxidize triphenylphosphine to triphenylphosphine oxide in the presence of O(2).

  17. Luminescent solutions and films of new europium complexes with chelating ligands

    NASA Astrophysics Data System (ADS)

    Kharcheva, Anastasia V.; Ivanov, Alexey V.; Borisova, Nataliya E.; Kaminskaya, Tatiana P.; Patsaeva, Svetlana V.; Popov, Vladimir V.; Yuzhakov, Viktor I.

    2015-03-01

    The development of new complexes of rare earth elements (REE) with chelating organic ligands opens up the possibility of purposeful alteration in the composition and structure of the complexes, and therefore tuning their optical properties. New ligands possessing two pyridine rings in their structure were synthesized to improve coordination properties and photophysical characteristics of REE compounds. Complexes of trivalent europium with novel chelating ligands were investigated using luminescence and absorption spectroscopy, as well as atomic force microscopy. Luminescence properties of new compounds were studied both for solutions and films deposited on the solid support. All complexes exhibit the characteristic red luminescence of Eu (III) ion with the absolute lumenescence quantum yield in polar acetonitrile solution varying from 0.21 to 1.45 % and emission lifetime ranged from 0.1 to 1 ms. Excitation spectra of Eu coordination complexes correspond with absorption bands of chelating ligand. The energy levels of the triplet state of the new ligands were determined from the phosphorescence at 77 K of the corresponding Gd (III) complexes. The morphology of films of europium complexes with different substituents in the organic ligands was investigated by atomic force microscopy (AFM). It strongly depends both on the type of substituent in the organic ligand, and the rotation speed of the spin-coater. New europium complexes with chelating ligands containing additional pyridine fragments represent outstanding candidates for phosphors with improved luminescence properties.

  18. Copper complexes of bioactive ligands with superoxide dismutase activity.

    PubMed

    Khalid, Huma; Hanif, Muhammad; Hashmi, Muhammad Ali; Mahmood, Tariq; Ayub, Khurshid; Monim-Ul-Mehboob, Muhammad

    2013-11-01

    Free radicals or reactive oxygen species (ROS) are highly toxic and their damaging effects result in a variety of detrimental health issues such as neurodegenerative, cardiovascular and age-related diseases. Human body has evolved an effective defense system including superoxide dismutase (SOD) and catalase against the toxicity of these free radicals. SOD is a metalloenzyme and it acts as an excellent antioxidant to protect the body from superoxide radicals that are generated in the biological system. However, the clinical use of SOD is limited due to its short in vivo life span, and its large size that hampered its penetration across the cell membranes. Pharmaceuticals that provide ROS scavenging systems are the most effective when the production of ROS exceeds the scavenging capacity of endogenous SOD as a result of aging or pathological processes. Inspired by the Nature, scientists have designed metal-based mimics of the superoxide dismutase. This review focuses on different copper complexes that are developed from bioactive ligands and mimic the protecting action of the SOD.

  19. Dual chirality control of palladium(II) complexes bearing tropos biphenyl diamine ligands.

    PubMed

    Aikawa, Kohsuke; Mikami, Koichi

    2005-12-14

    Axial and center chirality of Pd complexes with tropos biphenyl secondary diamine ligands is shown to be controlled by chiral amide (R)-DABNTf, which can efficiently discriminate between two enantiomeric Pd complexes.

  20. Non-aqueous chemistry of uranyl complexes with tripodal ligands

    NASA Astrophysics Data System (ADS)

    Burns, Carol J.; Clark, David L.; Duval, Paul B.; Scott, Brian L.

    2000-07-01

    The trans dioxo uranyl(VI) ion (UO22+) is remarkably stable with respect to the U=O bond, which dominates the stereochemistry of its coordination compounds in both aqueous and non-aqueous solutions. The linear O=U=O unit directs all other ligands to coordinate in an equatorial plane perpendicular to the O=U=O axis. In aqueous solution, uranyl coordination chemistry has been developed with a wide array of weak-field ligands that coordinate in the equatorial plane. In contrast, non-aqueous uranyl chemistry incorporating stronger donor ligands at equatorial sites has been less well developed. In this paper, the use of tripodal ligands with strong amide and alkoxide donors is employed, with an aim towards probing the electronic and steric effects of these cis-directing ligands on the structure and bonding of the trans dioxo unit.

  1. Progesterone receptor ligand binding pocket flexibility: crystal structures of the norethindrone and mometasone furoate complexes.

    PubMed

    Madauss, Kevin P; Deng, Su-Jun; Austin, Robert J H; Lambert, Millard H; McLay, Iain; Pritchard, John; Short, Steven A; Stewart, Eugene L; Uings, Ian J; Williams, Shawn P

    2004-06-17

    Although progesterone, the natural ligand of the progesterone receptor (PR), has a hydrogen atom at the 17alpha position, other potent steroid agonists such as norethindrone and mometasone furoate have larger substituents at this position that are accommodated by the PR ligand binding pocket. Crystallographic analysis of PR ligand binding domain complexes clearly demonstrated that these moieties were accommodated by local shifts of the protein main chain and by adoption of alternative side chain rotamer conformations of ligand-proximal amino acids. These conformational changes imparted a ligand-specific volume to the binding pocket, from 490 A3 in the metribolone complex to 520 A3 in the norethindrone complex, 565 A3 in the progesterone complex, and 730 A3 in the mometasone furoate complex. Despite these marked alterations in binding pocket volume, critical interactions essential for establishment of an active AF2 conformation were maintained.

  2. Highly Cooperative Tetrametallic Ruthenium-μ-Oxo-μ-Hydroxo Catalyst for the Alcohol Oxidation Reaction

    PubMed Central

    Yi, Chae S.; Zeczycki, Tonya N.; Guzei, Ilia A.

    2008-01-01

    The tetrametallic ruthenium-oxo-hydroxo-hydride complex {[(PCy3)(CO)RuH]4(μ4-O)(μ3-OH)(μ2-OH)} (1) was synthesized in two steps from the monomeric complex (PCy3)(CO)RuHCl (2). The tetrameric complex 1 was found to be a highly effective catalyst for the transfer dehydrogenation of alcohols. Complex 1 showed a different catalytic activity pattern towards primary and secondary benzyl alcohols, as indicated by the Hammett correlation for the oxidation reaction of p-X-C6H4CH2OH (ρ = −0.45) and p-X-C6H4CH(OH)CH3 (ρ = +0.22) (X = OMe, CH3, H, Cl, CF3). Both a sigmoidal curve from the plot of initial rate vs [PhCH(OH)CH3] (K0.5 = 0.34 M; Hill coefficient, n = 4.2±0.1) and the phosphine inhibition kinetics revealed the highly cooperative nature of the complex for the oxidation of secondary alcohols. PMID:18726005

  3. Effect of ligand denticity on the nitric oxide reactivity of cobalt(ii) complexes.

    PubMed

    Deka, Hemanta; Ghosh, Somnath; Saha, Soumen; Gogoi, Kuldeep; Mondal, Biplab

    2016-07-05

    The activation of nitric oxide (NO) by transition metal complexes has attracted a wide range of research activity. To study the role of ligand denticity on the NO reactivity of Co(ii) complexes, three complexes (, and ) were prepared with ligands , and [ = N(1),N(2)-bis(2,4,6-trimethylbenzyl)ethane-1,2-diamine; = N(1)-(2,4,6-trimethylbenzyl)-N(2)-(2-((2,4,6-trimethylbenzyl)amino)ethyl)ethane-1,2-diamine] and = N(1)-(2,4,6-trimethylbenzyl)-N(2),N(2)-bis(2-((2,4,6-trimethylbenzyl)amino)ethyl)ethane-1,2-diamine], respectively. The complexes differ from each other in terms of denticity and flexibility of the ligand frameworks. In degassed methanol solution, they were exposed to NO gas and their reactivity was studied using various spectroscopic techniques. In the case of complex with a bidentate ligand, reductive nitrosylation of the metal ion with concomitant dinitrosation of the ligand framework was observed. Complex with a tridentate ligand did not undergo reductive nitrosylation; rather, the formation of [Co(III)(NO(-))] was observed. The nitrosyl complexes were isolated and structurally characterized. On the other hand, complex with a tetradentate tripodal ligand did not react with NO. This can be attributed to the geometry of the complex as well as due to the accessibility of the corresponding redox potential.

  4. Water wafers: structure and melting of a hydrate inclusion compound of a neutral Pt(IV) complex with 1-methylcytosinato ligands

    NASA Astrophysics Data System (ADS)

    Randaccio, Lucio; Zangrando, Ennio; Cesàro, Attilio; Holthenrich, Dagmar; Lippert', Bernhard

    1998-01-01

    The characterization by X-ray analysis of the trans, trans, trans-[bis(1-methylcytosinate, N4)bis(ammine)bis(hydroxo)platinum(IV)] octahydrate complex (I) reveals an unexpected crystal packing. The neutral complex molecule is hosted by layers, totally built up by water molecules which do not exhibit a direct coordination to metal ions. These corrugated layers are made by puckered eight- and planar four-membered rings of water molecules, held together by hydrogen bonds with an ordered proton arrangement.

  5. Ligand Dependence of Binding to Three-Coordinate Fe(II) Complexes

    PubMed Central

    Chiang, Karen P.; Barrett, Pamela M.; Ding, Feizhi; Smith, Jeremy M.; Kingsley, Savariraj; Brennessel, William W.; Clark, Meghan M.; Lachicotte, Rene J.; Holland, Patrick L.

    2009-01-01

    A series of three- and four-coordinate iron(II) complexes with nitrogen, chlorine, oxygen, and sulfur ligands is presented. The electronic variation is explored by measuring the association constant of the neutral ligands, and the reduction potential of the iron(II) complexes. Varying the neutral ligand gives large changes in Keq, which decrease in the order CNtBu > pyridine > 2-picoline > DMF > MeCN > THF > PPh3. These differences can be attributed to a mixture of steric effects and electronic effects (both σ and π). The binding constants and the reduction potentials are surprisingly insensitive to changes in an anionic spectator ligand. This suggests that three-coordinate iron(II) complexes may have similar binding trends as proposed three-coordinate iron(II) intermediates in the FeMoco of nitrogenase, even though the anionic spectator ligands in the synthetic complexes differ from the sulfides in the FeMoco. PMID:19438179

  6. A proline-based aminophenol ligand: synthesis, iron complexation, magnetic, electronic and redox investigation.

    PubMed

    Sheykhi, Hamid; Safaei, Elham

    2014-01-24

    A new proline-based aminophenol ligand was synthesized by a convenient procedure. The ligand was characterized by (1)H NMR, (13)C NMR and IR spectroscopies, elemental analysis and optical activity measurements. Mononuclear iron(III) complex (FeL(Pro)) of this ligand was synthesized and characterized by IR, UV-vis, ESI-MS, magnetic susceptibility studies and cyclic voltammetry techniques. The equilibrium formation constant of FeL(Pro) and the pure UV-vis spectral profile of the complex was determined by multivariate hard modeling method. The molecular structure of FeL(Pro) determined by ESI-MS consist of two aminophenolate ligands. The variation of magnetic susceptibility with temperature indicates paramagnetic iron(III) in the monomeric complex. FeL(Pro) complex undergo metal-centered reduction, and ligand-centered oxidation. Copyright © 2013 Elsevier B.V. All rights reserved.

  7. Aromatic versus heteroradialene character in extended thiophloroglucinol ligands and their trinuclear nickel(II) complexes.

    PubMed

    Feldscher, Bastian; Stammler, Anja; Bögge, Hartmut; Glaser, Thorsten

    2014-08-01

    Extended phloroglucinol ligands and complexes are best described as nonaromatic heteroradialenes. Herein, the electronic structures of extended thiophloroglucinol ligands and their Ni(II) 3 complexes are evaluated by comparison to their phloroglucinol analogs by means of NMR, FTIR, UV/Vis, and structural parameters. To provide a full set of compounds for this comparison of S versus O substitution, a new triplesalen ligand, its Ni(II) 3 complex, and a new thiophloroglucinol were synthesized. (1) H and (15) N NMR chemical shifts and coupling constants prove that the thiophloroglucinol ligands exist as the N-protonated and not the O-protonated tautomer. (13) C and (15) N NMR chemical shifts and structural parameters further demonstrated that the extended thiophloroglucinol ligands must be described with a predominant thione-enamine (heteroradialene) character despite the participation of a CS double bond. In the Ni(II) 3 complexes, this heteroradialene character is reduced but still predominant.

  8. Organic iron (III) complexing ligands during an iron enrichment experiment in the western subarctic North Pacific

    NASA Astrophysics Data System (ADS)

    Kondo, Yoshiko; Takeda, Shigenobu; Nishioka, Jun; Obata, Hajime; Furuya, Ken; Johnson, William Keith; Wong, C. S.

    2008-06-01

    Complexation of iron (III) with natural organic ligands was investigated during a mesoscale iron enrichment experiment in the western subarctic North Pacific (SEEDS II). After the iron infusions, ligand concentrations increased rapidly with subsequent decreases. While the increases of ligands might have been partly influenced by amorphous iron colloids formation (12-29%), most in-situ increases were attributable to the <200 kDa fraction. Dilution of the fertilized patch may have contributed to the rapid decreases of the ligands. During the bloom decline, ligand concentration increased again, and the high concentrations persisted for 10 days. The conditional stability constant was not different between inside and outside of the fertilized patch. These results suggest that the chemical speciation of the released iron was strongly affected by formation of the ligands; the production of ligands observed during the bloom decline will strongly impact the iron cycle and bioavailability in the surface water.

  9. Chromium(III) complexes of naturally occurring ligands

    NASA Astrophysics Data System (ADS)

    El-Shahawi, M. S.

    1995-02-01

    Chromium(III) complexes prepared from CrCl 3Py 3 and anhydrous CrCl 3 with L(-)-threonine, nicotinic acid, glycine, D(-)-penicillamine, L(-)-cysteine and L(-)-cystine have been characterized. The magnetic moments (3.4-4.05 B.M.) are close to the spin only value for a d3 chromium(III) ion in octahedral or pseudo octahedral symmetry. In the electronic spectra two sharp peaks are observed at (15.9-19.8) × 10 3 and (22.0-26.7) × 10 3 cm -1 and are assigned to d-d transitions in the pseudo octahedral configuration. The parameters ( Dq, B, β35) and the interelectronic repulsion parameter with the ionic charge, Z∗, are calculated and place the ligand in the middle of the spectrochemical series. In the circular dichroism spectra three Cotton effects are observed in the forbidden band of the optically active chelates and are assigned to the 2E( 2Eg), 2A 2( 2T 1g) and2E( 2T 1g) while that in the spin allowed band are a result of the splitting of the 4A 2g( 4T 2g) to 4A 1( 4T 2g) and4E( 4T 2g) transitions. The structure of threonine, cystine and cysteine chelates are likely to be fac since strong and well defined Cotton effects are observed. The Cotton effects of penicillamine chelates are weak suggesting formation of the mer structure. Prolonged heating or bubbling air through the solution of CrCl 3Py 3 containing L(-)-threonine, glycine or nicotinic acid for several hours enhances chromium(VI) formation.

  10. Iridium-catalyzed H/D exchange: ligand complexes with improved efficiency and scope.

    PubMed

    Parmentier, Michael; Hartung, Thomas; Pfaltz, Andreas; Muri, Dieter

    2014-09-01

    Hydrogen isotope exchange (HIE) is one of the most attractive tools for the introduction of deuterium or tritium to an organic compound. Herein, iridium complexes with N,P-ligands, highly active catalysts for asymmetric double bond reductions, have been tested for their HIE capabilities. Electron-rich ligands, containing dicyclohexylphosphines or phosphinites, have been identified as excellent ligands for efficient deuterium incorporation. Substrates with strong directing groups, that is, pyridines, ketones, and amides, as well as weak ligating units, such as, nitro, sulfones, and sulfonamides, could be labeled efficiently. With the addition of tris(pentafluorophenyl) borane to the reaction mixture, also highly deactivating nitrile substituents were well tolerated in the reaction. Based on the excellent results obtained with the chiral ThrePhox ligand, a structurally simpler, achiral ligand was developed. The iridium complex containing this ligand, proved to be a powerful catalyst for HIE reactions. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  11. Enzymatic and structural characterization of non-peptide ligand-cyclophilin complexes.

    PubMed

    Kontopidis, George; Taylor, Paul; Walkinshaw, Malcolm D

    2004-03-01

    Piperidine ligands are described that provide the first examples of non-peptidic ligand structures for the cyclophilin family of proteins. Crystal structures of two ligand complexes are compared with the unliganded protein and show ligand-induced changes in side-chain conformation and water binding. A peptidylprolyl cis-trans-isomerase assay showed the dissociation constants of the two ligands to be 320 and 25 mM. This study also provides the first published data for both enzymatic activity and three-dimensional structure for any protein-ligand complex that binds with a high-millimolar dissociation constant. The structures may be of relevance in the field of drug design, as they suggest starting points for the design of larger tighter-binding analogues.

  12. De novo generation of singlet oxygen and ammine ligands by photoactivation of a platinum anticancer complex.

    PubMed

    Zhao, Yao; Farrer, Nicola J; Li, Huilin; Butler, Jennifer S; McQuitty, Ruth J; Habtemariam, Abraha; Wang, Fuyi; Sadler, Peter J

    2013-12-16

    Worth the excitement: Highly reactive oxygen and nitrogen species are generated by photoactivation of the anticancer platinum(IV) complex trans,trans,trans-[Pt(N3 )2 (OH)2 (MA)(Py)] (MA=methylamine, Py=pyridine). Singlet oxygen is formed from the hydroxido ligands and not from dissolved oxygen, and ammine ligands are products from the conversion of azido ligands to nitrenes. Both processes can induce oxidation of guanine.

  13. Cyclometalated ruthenium(II) complexes with a bis-carbene CCC-pincer ligand.

    PubMed

    Zhang, You-Ming; Shao, Jiang-Yang; Yao, Chang-Jiang; Zhong, Yu-Wu

    2012-08-21

    The first series of cyclometalated ruthenium complexes with a CCC-pincer bis-carbene ligand have been obtained as bench-stable compounds. Single-crystal X-ray analysis of one of these complexes with 4'-di-p-anisylamino-2,2':6',2''-terpyridine is presented. The Ru(II/III) redox potentials and MLCT absorptions of these complexes can be varied by attaching an electron-donating or -withdrawing group on the noncyclometalating ligand.

  14. Examining the Scope and Thermodynamics of Assembly in Nesting Complexes Comprising Molecular Baskets and TPA Ligands.

    PubMed

    Zhiquan, Lei; Polen, Shane M; Hadad, Christopher M; RajanBabu, T V; Badjić, Jovica D

    2017-09-15

    Molecular baskets capture various tris(2-pyridylmethyl)amine ligands, with and without zinc(II) cation, to form nesting complexes. The results of our computational (MD) and experimental ((1)H NMR/ITC) studies suggest that the assembly is driven by the hydrophobic effect with the charge of complementary molecular components playing an important role in the formation of nesting complexes. In brief, the complexation only takes place when the basket and the ligand carry either oppositely charged or noncharged groups.

  15. Predicting Electrophoretic Mobility of Protein-Ligand Complexes for Ligands from DNA-Encoded Libraries of Small Molecules.

    PubMed

    Bao, Jiayin; Krylova, Svetlana M; Cherney, Leonid T; Hale, Robert L; Belyanskaya, Svetlana L; Chiu, Cynthia H; Shaginian, Alex; Arico-Muendel, Christopher C; Krylov, Sergey N

    2016-05-17

    Selection of target-binding ligands from DNA-encoded libraries of small molecules (DELSMs) is a rapidly developing approach in drug-lead discovery. Methods of kinetic capillary electrophoresis (KCE) may facilitate highly efficient homogeneous selection of ligands from DELSMs. However, KCE methods require accurate prediction of electrophoretic mobilities of protein-ligand complexes. Such prediction, in turn, requires a theory that would be applicable to DNA tags of different structures used in different DELSMs. Here we present such a theory. It utilizes a model of a globular protein connected, through a single point (small molecule), to a linear DNA tag containing a combination of alternating double-stranded and single-stranded DNA (dsDNA and ssDNA) regions of varying lengths. The theory links the unknown electrophoretic mobility of protein-DNA complex with experimentally determined electrophoretic mobilities of the protein and DNA. Mobility prediction was initially tested by using a protein interacting with 18 ligands of various combinations of dsDNA and ssDNA regions, which mimicked different DELSMs. For all studied ligands, deviation of the predicted mobility from the experimentally determined value was within 11%. Finally, the prediction was tested for two proteins and two ligands with a DNA tag identical to those of DELSM manufactured by GlaxoSmithKline. Deviation between the predicted and experimentally determined mobilities did not exceed 5%. These results confirm the accuracy and robustness of our model, which makes KCE methods one step closer to their practical use in selection of drug leads, and diagnostic probes from DELSMs.

  16. From N-alkylimidazole ligands at a rhenium center: ring opening or formation of NHC complexes.

    PubMed

    Huertos, Miguel A; Pérez, Julio; Riera, Lucía; Menéndez-Velázquez, Amador

    2008-10-15

    Cationic rhenium tricarbonyl complexes with three N-alkylimidazole ligands undergo deprotonation of the central CH group upon reaction with 1 equiv of KN(SiMe3)2. For the tris(N-methylimidazole) complex, the metal fragment shifts from N to C, leaving an NHC complex with a nonsubstituted N atom. For compounds with at least one N-mesitylimidazole ligand, the intramolecular attack of the deprotonated carbon onto the central carbon of an N-mesitylimidazole ligand results in ring opening of the latter.

  17. Effect of the complexation on the NLO electronic contribution in film based conjugated quinoline ligand

    NASA Astrophysics Data System (ADS)

    Arroudj, S.; Aamoum, A.; Messaadia, L.; Bouraiou, A.; Bouacida, S.; Bouchouit, K.; Sahraoui, B.

    2017-07-01

    In this paper we present the complexation, single crystal structure and the third harmonic generation response of the quinoline ligand and its mercury complex. Crystals structure of Bis(quinoline) Mercury (II) dichloride, (C18H14Cl2HgN2) is obtained from aqueous solution and characterized by single crystal X-ray diffraction at room temperature. This complex crystallizes in centrosymmetric space group. The structure is formed by chains along c axis. These chains are constituted by the quinoline ligand. The electronic contribution χTHG < 3 > is measured using the third harmonic generation technique on thin films at 1064 nm for quinoline ligand and its mercury complex incorporated in PMMA matrices. The first hyperpolarizability (β), the polarizability (α) and the electric dipole moment (μ) were calculated using the density functional B3LYP method with the LANL2DZ basis set. The obtained results for the quinoline ligand and its Hg complex show non zero (β).

  18. Ligand substitution reactions of a phenolic quinolyl hydrazone; oxidovanadium (IV) complexes

    PubMed Central

    2011-01-01

    Background Quinoline ring has therapeutic and biological activities. Quinolyl hydrazones constitute a class of excellent chelating agents. Recently, the physiological and biological activities of quinolyl hydrazones arise from their tendency to form metal chelates with transition metal ions. In this context, we have aimed to study the competency effect of a phenolic quinolyl hydrazone (H2L; primary ligand) with some auxiliary ligands (Tmen, Phen or Oxine; secondary ligands) towards oxidovanadium (IV) ions. Results Mono- and binuclear oxidovanadium (IV) - complexes were obtained from the reaction of a phenolic quinolyl hydrazone with oxidovanadium (IV)- ion in absence and presence of N,N,N',N'- tetramethylethylenediamine (Tmen), 1,10-phenanthroline (Phen) or 8-hydroxyquinoline (Oxine). The phenolic quinolyl hydrazone ligand behaves as monobasic bidentate (NO- donor with O- bridging). All the obtained complexes have the preferable octahedral geometry except the oxinato complex (2) which has a square pyramid geometry with no axial interaction; the only homoleptic complex in this study. Conclusion The ligand exchange (substitution/replacement) reactions reflect the strong competency power of the auxiliary aromatic ligands (Phen/Oxine) compared to the phenolic quinolyl hydrazone (H2L) towards oxidovanadium (IV) ion; (complexes 2 and 3). By contrast, in case of the more flexible aliphatic competitor (Tmen), an adduct was obtained (4). The obtained complexes reflect the strength of the ligand field towards the oxidovanadium (IV)- ion; Oxine or Phen >> phenolic hydrazone (H2L) > Tmen. PMID:21846387

  19. Electric relaxation processes in chemodynamics of aqueous metal complexes: from simple ligands to soft nanoparticulate complexants.

    PubMed

    van Leeuwen, Herman P; Buffle, Jacques; Town, Raewyn M

    2012-01-10

    The chemodynamics of metal complexes with nanoparticulate complexants can differ significantly from that for simple ligands. The spatial confinement of charged sites and binding sites to the nanoparticulate body impacts on the time scales of various steps in the overall complex formation process. The greater the charge carried by the nanoparticle, the longer it takes to set up the counterion distribution equilibrium with the medium. A z+ metal ion (z > 1) in a 1:1 background electrolyte will accumulate in the counterionic atmosphere around negatively charged simple ions, as well as within/around the body of a soft nanoparticle with negative structural charge. The rate of accumulation is often governed by diffusion and proceeds until Boltzmann partition equilibrium between the charged entity and the ions in the medium is attained. The electrostatic accumulation proceeds simultaneously with outer-sphere and inner-sphere complex formation. The rate of the eventual inner-sphere complex formation is generally controlled by the rate constant of dehydration of the metal ion, k(w). For common transition metal ions with moderate to fast dehydration rates, e.g., Cu(2+), Pb(2+), and Cd(2+), it is shown that the ionic equilibration with the medium may be the slower step and thus rate-limiting in their overall complexation with nanoparticles.

  20. Synthesis and Characterization of Metal Complexes with Schiff Base Ligands

    ERIC Educational Resources Information Center

    Wilkinson, Shane M.; Sheedy, Timothy M.; New, Elizabeth J.

    2016-01-01

    In order for undergraduate laboratory experiments to reflect modern research practice, it is essential that they include a range of elements, and that synthetic tasks are accompanied by characterization and analysis. This intermediate general chemistry laboratory exercise runs over 2 weeks, and involves the preparation of a Schiff base ligand and…

  1. Synthesis and Characterization of Metal Complexes with Schiff Base Ligands

    ERIC Educational Resources Information Center

    Wilkinson, Shane M.; Sheedy, Timothy M.; New, Elizabeth J.

    2016-01-01

    In order for undergraduate laboratory experiments to reflect modern research practice, it is essential that they include a range of elements, and that synthetic tasks are accompanied by characterization and analysis. This intermediate general chemistry laboratory exercise runs over 2 weeks, and involves the preparation of a Schiff base ligand and…

  2. Structure of the Ni(II) complex of Escherichia coli peptide deformylase and suggestions on deformylase activities depending on different metal(II) centres.

    PubMed

    Yen, Ngo Thi Hai; Bogdanović, Xenia; Palm, Gottfried J; Kühl, Olaf; Hinrichs, Winfried

    2010-02-01

    Crystal structures of polypeptide deformylase (PDF) of Escherichia coli with nickel(II) replacing the native iron(II) have been solved with chloride and formate as metal ligands. The chloro complex is a model for the correct protonation state of the hydrolytic hydroxo ligand and the protonated status of the Glu133 side chain as part of the hydrolytic mechanism. The ambiguity that recently some PDFs have been identified with Zn(2+) ion as the active-site centre whereas others are only active with Fe(2+) (or Co(2+), Ni(2+) is discussed with respect to Lewis acid criteria of the metal ion and substrate activation by the CD loop.

  3. Studies on Cu(II) ternary complexes involving an aminopenicillin drug and imidazole containing ligands

    NASA Astrophysics Data System (ADS)

    Regupathy, Sthanumoorthy; Nair, Madhavan Sivasankaran

    2010-02-01

    Equilibrium studies on the ternary complex systems involving ampicillin (amp) as ligand (A) and imidazole containing ligands viz., imidazole (Him), benzimidazole (Hbim), histamine (Hist) and histidine (His) as ligands (B) at 37 °C and I = 0.15 mol dm -3 (NaClO 4) show the presence of CuABH, CuAB and CuAB 2. The proton in the CuABH species is attached to ligand A. In the ternary complexes the ligand, amp(A) binds the metal ion via amino nitrogen and carbonyl oxygen atom. The CuAB (B = Hist/His)/CuAB 2 (B = Him/Hbim) species have also been isolated and the analytical data confirmed its formation. Non-electrolytic behavior and monomeric type of chelates have been assessed from their low conductance and magnetic susceptibility values. The electronic and vibrational spectral results were interpreted to find the mode of binding of ligands to metal and geometry of the complexes. This is also supported by the g tensor values calculated from ESR spectra. The thermal behaviour of complexes were studied by TGA/DTA. The redox behavior of the complexes has been studied by cyclic voltammetry. The antimicrobial activity and CT DNA cleavage study of the complexes show higher activity for ternary complexes.

  4. Synthesis and antimalarial activity of metal complexes of cross-bridged tetraazamacrocyclic ligands

    PubMed Central

    Hubin, Timothy J.; Amoyaw, Prince N. -A.; Roewe, Kimberly D.; Simpson, Natalie C.; Maples, Randall D.; Carder Freeman, TaRynn N.; Cain, Amy N.; Le, Justin G.; Archibald, Stephen J.; Khan, Shabana I.; Tekwani, Babu L.; Khan, M. O. Faruk

    2014-01-01

    Using transition metals such as manganese(II), iron(II), cobalt(II), nickel(II), copper(II), and zinc(II), several new metal complexes of cross-bridged tetraazamacrocyclic chelators namely, cyclen- and cyclam-analogs with benzyl groups, were synthesized and screened for in vitro antimalarial activity against chloroquine-resistant (W2) and chloroquine-sensitive (D6) strains of Plasmodium falciparum. The metal-free chelators tested showed little or no antimalarial activity. All the metal complexes of the dibenzyl cross-bridged cyclam ligand exhibited potent antimalarial activity. The Mn2+ complex of this ligand was the most potent with IC50s of 0.127 and 0.157 µM against the chloroquine-sensitive (D6) and chloroquine-resistant (W2) P. falciparum strains, respectively. In general, the dibenzyl hydrophobic ligands showed better antimalarial activity compared to the activity of monobenzyl ligands, potentially because of their higher lipophilicity and thus better cell penetration ability. The higher antimalarial activity displayed by the manganese complex for the cyclam ligand in comparison to that of the cyclen, correlates with the larger pocket of cyclam compared to that of cyclen which produces a more stable complex with the Mn2+. Few of the Cu2+ and Fe2+ complexes also showed improvement in activity but Ni2+, Co2+ and Zn2+ complexes did not show any improvement in activity upon the metal-free ligands for anti-malarial development. PMID:24857776

  5. Enthalpy of ligand substitution in cis organopalladium complexes with monodentate ligands.

    PubMed

    Salas, Gorka; Casares, Juan A; Espinet, Pablo

    2009-10-21

    The enthalpy for the substitution reaction cis-[PdRf(2)(THF)(2)] + 2 L -->cis-[PdRf(2)L(2)] + 2THF (THF = tetrahydrofuran) has been measured in THF by calorimetric methods for Rf = 3,5-dichloro-2,4,6-trifluorophenyl, L = PPh(3), AsPh(3), SbPh(3), PMePh(2), PCyPh(2), PMe(3), AsMePh(2), or L(2) = dppe (1,2-bis(diphenylphosphino)ethane), dppf (1,1'-bis(diphenylphosphino)ferrocene). The values determined show that the substitution enthalpy has a strong dependence on the electronic and steric properties of the ligand. The study of the consecutive substitution reactions cis-[PdRf(2)(THF)(2)] + L -->cis-[PdRf(2)L(THF)] + THF, and cis-[PdRf(2)L(THF)] + L -->cis-[PdRf(2)L(2)] + THF has been carried our for L = PPh(3) and L = PCyPh(2). The first substitution is clearly more favorable for the bulkier leaving ligand, but the second gives practically the same DeltaH value for both cases, indicating that the differences in steric hindrance happen to compensate the electronic differences for both ligands. The X-ray structures of cis-[PdRf(2)(PMePh(2))(2)], cis-[PdRf(2)(dppe)] and cis-[PdRf(2)(dppf)] are reported.

  6. Investigations into the synthesis and fluorescence properties of Tb(III) complexes of a novel bis-β-diketone-type ligand and a novel bispyrazole ligand

    NASA Astrophysics Data System (ADS)

    Xiao, Lin-Xiang; Luo, Yi-Ming; Chen, Zhe; Li, Jun; Tang, Rui-Ren

    2008-11-01

    A novel bis-β-diketone organic ligand, 1,1'-(2,6-bispyridyl)bis-3-( p-methoxyphenyl)-1,3-propanedione (L 1) and its derivatives, a novel bispyrazole ligand, 2,6-bis(5-(4-methoxyphenyl)-1H-pyrazol-3-yl)pyridine (L 2) were designed and synthesized and their complexes with Tb(III) ion were successfully prepared. The ligands and the corresponding metal complexes were characterized by elemental analysis, infrared, proton nuclear magnetic resonance spectroscopy and TG-DTA. Analysis of the IR spectra suggested that the lanthanide metal ion Tb(III) coordinated to the ligands via the nitrogen atom of the pyridine ring and the carbonyl oxygen atoms for ligand L 1 and the nitrogen atom of the pyrazole ring for ligand L 2. The fluorescence properties of the two complexes in solid state were investigated and it was discovered that the Tb(III) ions could be sensitized by both the ligand (L 1) and ligand (L 2) to some extent. In particular, the complex of ligand (L 2) is a better green luminescent material that could be used as a candidate material in organic light-emitting devices (OLEDs) since it could be much better sensitized by the ligand (L 2), and the fluorescence intensity of Tb(III) complex of L 2 are almost as twice strong as L 1's.

  7. Investigations into the synthesis and fluorescence properties of Tb(III) complexes of a novel bis-beta-diketone-type ligand and a novel bispyrazole ligand.

    PubMed

    Xiao, Lin-Xiang; Luo, Yi-Ming; Chen, Zhe; Li, Jun; Tang, Rui-Ren

    2008-11-15

    A novel bis-beta-diketone organic ligand, 1,1'-(2,6-bispyridyl)bis-3-(p-methoxyphenyl)-1,3-propanedione (L1) and its derivatives, a novel bispyrazole ligand, 2,6-bis(5-(4-methoxyphenyl)-1H-pyrazol-3-yl)pyridine (L2) were designed and synthesized and their complexes with Tb(III) ion were successfully prepared. The ligands and the corresponding metal complexes were characterized by elemental analysis, infrared, proton nuclear magnetic resonance spectroscopy and TG-DTA. Analysis of the IR spectra suggested that the lanthanide metal ion Tb(III) coordinated to the ligands via the nitrogen atom of the pyridine ring and the carbonyl oxygen atoms for ligand L1 and the nitrogen atom of the pyrazole ring for ligand L2. The fluorescence properties of the two complexes in solid state were investigated and it was discovered that the Tb(III) ions could be sensitized by both the ligand (L1) and ligand (L2) to some extent. In particular, the complex of ligand (L2) is a better green luminescent material that could be used as a candidate material in organic light-emitting devices (OLEDs) since it could be much better sensitized by the ligand (L2), and the fluorescence intensity of Tb(III) complex of L2 are almost as twice strong as L1's.

  8. Gas phase computational studies on the competition between nitrile and water ligands in uranyl complexes.

    PubMed

    Schoendorff, George; de Jong, Wibe A; Gordon, Mark S; Windus, Theresa L

    2010-08-26

    The gas phase formation of uranyl dicationic complexes containing water and nitrile (acetonitrile, propionitrile, and benzonitrile) ligands, [UO(2)(H(2)O)(m)(RCN)(n)](2+), has been studied using density functional theory with a relativistic effective core potential to account for scalar relativistic effects on uranium. It is shown that nitrile addition is favored over the addition of water ligands. Decomposition of these complexes to [UO(2)OH(H(2)O)(m)(RCN)(n)](+) by the loss of either H(3)O(+) or (RCN + H)(+) is also examined. It is found that this reaction is competitive with the ligand addition when the coordination sphere of uranyl is unsaturated. Additionally, this reaction is influenced by the size of the nitrile ligand with reactions involving acetonitrile being the most prevalent. Finally, ligand addition to the monocation shows trends similar to that of the dication with energetic differences being smaller for the addition to the monocation.

  9. Synthesis and Characterization of Heterodinuclear IrCo, RuCo, IrNi, and RuNi Complexes Containing Pyrazolate and Pyrazolylborate Ligands.

    PubMed

    Carmona, Daniel; Lahoz, Fernando J.; Atencio, Reinaldo; Edwards, Andrew J.; Oro, Luis A.; Lamata, M. Pilar; Esteban, Montserrat; Trofimenko, Swiatoslaw

    1996-04-24

    Treatment of the metallo ligands [ML(pz)(2)(Hpz)] (pz = pyrazolate; L = C(5)Me(5), M = Ir (1); L = mesitylene, M = Ru (3)) with [M'Cl{HB(3-i-Pr-4-Br-pz)(3)}] (M' = Co (4), Ni (5)) yields heterodinuclear complexes of formula [LM(&mgr;-pz)(2)(&mgr;-Cl)M'{HB(3-i-Pr-4-Br-pz)(3)}] (L = C(5)Me(5); M = Ir; M' = Co (6), Ni (7). L = mesitylene; M = Ru; M' = Co (8)). The related complex [Ru(eta(6)-p-cymene)(pz)(2)(Hpz)] (2) reacts with equimolar amounts of 4 or 5 to give mixtures of the corresponding bis(&mgr;-pyrazolato) &mgr;-chloro complexes [(eta(6)-p-cymene)Ru(&mgr;-pz)(2)(&mgr;-Cl)M'{HB(3-i-Pr-4-Br-pz)(3)}] (M' = Co (9), Ni (10)) and the triply pyrazolato-bridged complexes [(eta(6)-p-cymene)Ru(&mgr;-pz)(3)M'{HB(3-i-Pr-4-Br-pz)(3)}] (M' = Co (11), Ni (12)). Complex 1 reacts with 5 in the presence of KOH to give the IrNi complex [(eta(5)-C(5)Me(5))Ir(&mgr;-pz)(3)Ni{HB(3-i-Pr-4-Br-pz)(3)}] (13) whereas its reaction with 4 and KOH rendered the bis(&mgr;-pyrazolato) &mgr;-hydroxo complex [(eta(5)-C(5)Me(5))Ir(&mgr;-pz)(2)(&mgr;-OH)Co{HB(3-i-Pr-4-Br-pz)(3)}] (14). The molecular structure of the heterobridged IrCo complex (6) and those of the homobridged RuNi (12) and IrNi (13) complexes have been determined by X-ray analyses. Compound 6 crystallizes in the monoclinic space group P2(1)/n, with a = 10.146(5) Å, b = 18.435(4) Å, c = 22.187(13) Å, beta = 97.28(4) degrees, and Z = 4. Complex 12 is monoclinic, space group P2(1), with a = 10.1169(7) Å, b = 21.692(2) Å, c = 11.419(1) Å, beta = 112.179(7) degrees, and Z = 2. Compound 13 crystallizes in the monoclinic space group Cc, with a = 13.695(2) Å, b = 27.929(6) Å, c = 13.329(2) Å, beta = 94.11(4) degrees, and Z = 4. All the neutral complexes 6, 12, and 13 consist of linear M.M'.B backbones with two (6) or three (12, 13) pyrazolate ligands bridging the dimetallic M.M' units and three substituted 3-i-Pr-4-Br-pz groups joining M' to the boron atoms. The presence in the proximity of the first-row metal M' of the three

  10. Luminescense properties of new complexes of Eu(III) and Tb(III) with heterotopic ligands

    NASA Astrophysics Data System (ADS)

    Patroniak, Violetta; Hnatejko, Zbigniew; Grochowska, Agnieszka M.; Stefankiewicz, Artur R.

    2006-07-01

    As a result of coordination between ligands L and L' and europium(III) and terbium(III) ions, the new architectures were formed. The formulae of the complexes have been assigned on the basis of the spectroscopic data in solution and microanalyses. The europium complexes show excellent luminescence properties with high quantum yield ( 1b-Eu 3L2) and effective intramolecular energy transfer from the ligand to the Eu(III) ions.

  11. Luminescense properties of new complexes of Eu(III) and Tb(III) with heterotopic ligands.

    PubMed

    Patroniak, Violetta; Hnatejko, Zbigniew; Grochowska, Agnieszka M; Stefankiewicz, Artur R

    2006-07-01

    As a result of coordination between ligands L and L' and europium(III) and terbium(III) ions, the new architectures were formed. The formulae of the complexes have been assigned on the basis of the spectroscopic data in solution and microanalyses. The europium complexes show excellent luminescence properties with high quantum yield (1b-Eu(3)L(2)) and effective intramolecular energy transfer from the ligand to the Eu(III) ions.

  12. Asymmetry in Platinum Acetylide Complexes: Confinement of the Triplet Exciton to the Lowest Energy Ligand (Preprint)

    DTIC Science & Technology

    2006-08-01

    lower energy thiophene units, but some emission is also observed from the higher energy phenyl units.4oThe study describes similar excited state...AFRL-ML-WP-TP-2007-530 ASYMMETRY IN PLATINUM ACETYLIDE COMPLEXES: CONFINEMENT OF THE TRIPLET EXCITON TO THE LOWEST ENERGY LIGAND (PREPRINT...GRANT NUMBER 4. TITLE AND SUBTITLE ASYMMETRY IN PLATINUM ACETYLIDE COMPLEXES: CONFINEMENT OF THE TRIPLET EXCITON TO THE LOWEST ENERGY LIGAND

  13. Chelated bis(NHC) complexes of saturated (imidazolin-2-ylidene) NHC ligands: structural authentication and facile ligand fragmentation.

    PubMed

    Gardiner, Michael G; McGuinness, David S; Vanston, Catriona R

    2017-02-28

    The CH2-linked bis(NHC) complexes [{((S)MesIm)2CH2}PdBr2] and [{((S)MesIm)2CH2}Pd(NCMe)2][PF6]2 are reported. These represent the first structurally characterized chelated, saturated bis(NHC) complexes. The complexes are subject to facile ligand fragmentation during their synthesis. Longer (CH2)n-linkers in the imidazolin-2-ylidene-based series of ligands afforded the pendant imidazolinium mono(NHC) complexes [{((S)MesImH)((S)MesIm)(CH2)n}PdBr3] by reaction of the diimidazolinium salts (n = 2, 3) with palladium acetate. These did not react to give the bis(NHC) complexes, as was the case for [{((S)MesImH)((S)MesIm)CH2}PdX3] (X = Br, I). Disilver(i) complexes [{((S)MesIm)2(CH2)n}2Ag2][PF6]2n = 1 and 3, were also prepared.

  14. (S)-5-(p-Nitrobenzyl)-PCTA, a Promising Bifunctional Ligand with Advantageous Metal Ion Complexation Kinetics

    PubMed Central

    Tircsó, Gyula; Benyó, Enikő Tircsóné; Suh, Eul Hyun; Jurek, Paul; Kiefer, Garry E.; Sherry, A. Dean; Kovács, Zoltán

    2009-01-01

    A bifunctional version of PCTA (3,6,9,15-tetraazabicyclo[9.3.1]pentadeca-1(15),11,13-triene-3,6,9,-triacetic acid) that exhibits fast complexation kinetics with the trivalent lanthanide(III) ions was synthesized in reasonable yields starting from N, N′, N″-tristosyl-(S)-2-(p-nitrobenzyl)-diethylenetriamine. pH-potentiometric studies showed that the basicities of p-nitrobenzyl-PCTA and the parent ligand PCTA were similar. The stability of M(NO2-Bn-PCTA) (M = Mg2+, Ca2+, Cu2+, Zn2+) complexes was similar to that of the corresponding PCTA complexes while the stability of Ln3+ complexes of the bifunctional ligand is somewhat lower than that of PCTA chelates. The rate of complex formation of Ln(NO2-Bn-PCTA) complexes was found to be quite similar to that of PCTA, a ligand known to exhibit the fastest formation rates among all lanthanide macrocyclic ligand complexes studied to date. The acid catalyzed decomplexation kinetic studies of the selected Ln(NO2-Bn-PCTA) complexes showed that the kinetic inertness of the complexes was comparable to that of Ln(DOTA) chelates making the bifunctional ligand NO2-Bn-PCTA suitable for labeling biological vectors with radioisotopes for nuclear medicine applications. PMID:19220012

  15. (S)-5-(p-nitrobenzyl)-PCTA, a promising bifunctional ligand with advantageous metal ion complexation kinetics.

    PubMed

    Tircsó, Gyula; Benyó, Eniko Tircsóné; Suh, Eul Hyun; Jurek, Paul; Kiefer, Garry E; Sherry, A Dean; Kovács, Zoltán

    2009-03-18

    A bifunctional version of PCTA (3,6,9,15-tetraazabicyclo[9.3.1]pentadeca-1(15),11,13-triene-3,6,9,-triacetic acid) that exhibits fast complexation kinetics with the trivalent lanthanide(III) ions was synthesized in reasonable yields starting from N,N',N''-tristosyl-(S)-2-(p-nitrobenzyl)-diethylenetriamine. pH-potentiometric studies showed that the basicities of p-nitrobenzyl-PCTA and the parent ligand PCTA were similar. The stability of M(NO(2)-Bn-PCTA) (M = Mg(2+), Ca(2+), Cu(2+), Zn(2+)) complexes was similar to that of the corresponding PCTA complexes, while the stability of Ln(3+) complexes of the bifunctional ligand is somewhat lower than that of PCTA chelates. The rate of complex formation of Ln(NO(2)-Bn-PCTA) complexes was found to be quite similar to that of PCTA, a ligand known to exhibit the fastest formation rates among all lanthanide macrocyclic ligand complexes studied to date. The acid-catalyzed decomplexation kinetic studies of the selected Ln(NO(2)-Bn-PCTA) complexes showed that the kinetic inertness of the complexes was comparable to that of Ln(DOTA) chelates making the bifunctional ligand NO(2)-Bn-PCTA suitable for labeling biological vectors with radioisotopes for nuclear medicine applications.

  16. Tripodal phenylamine-based ligands and their CoII complexes.

    PubMed

    Jones, Matthew B; MacBeth, Cora E

    2007-10-01

    The syntheses of two phenylamine-based ligand systems, N(o-PhNH(2))(3) and N(o-PhNHC(O)(i)Pr)(3), are reported. These ligands readily coordinate to Co(II) to form monomeric complexes. X-ray diffraction studies establish that the [N(o-PhNC(O)(i)Pr)(3)](3-) ligand stabilizes the Co(II) ion in a trigonal-monopyramidal coordination environment. The axial coordination site in this complex is accessible and, upon cyanide coordination, generates an electrochemically active species.

  17. Selective transformations of cyclopentadienyl ligands of transition-metal and rare-earth metal complexes.

    PubMed

    Liu, Ruiting; Zhou, Xigeng

    2013-04-21

    Cyclopentadienyl and substituted cyclopentadienyl ligands are observed in a wide range of organometallic complexes. In addition to serving as ancillary ligands, these ligands have come into their own as intermediates in organometallic reactions, and shown many unique reaction modes involving ring C-H, C-C and C=C bond cleavages. This feature article summarizes the progressive development of cyclopentadienyl-based reactions of metallocene complexes of transition metals and rare-earth metals, with the aim of further developing the fundamental modes of reactivity of such systems together with their synthetic applications.

  18. Modeling RNA-ligand interactions: the Rev-binding element RNA-aminoglycoside complex.

    PubMed

    Leclerc, F; Cedergren, R

    1998-01-15

    An approach to the modeling of ligand-RNA complexes has been developed by combining three-dimensional structure-activity relationship (3D-SAR) computations with a docking protocol. The ability of 3D-SAR to predict bound conformations of flexible ligands was first assessed by attempting to reconstruct the known, bound conformations of phenyloxazolines complexed with human rhinovirus 14 (HRV14) RNA. Subsequently, the same 3D-SAR analysis was applied to the identification of bound conformations of aminoglycosides which associate with the Rev-binding element (RBE) RNA. Bound conformations were identified by parsing ligand conformational data sets with pharmacophores determined by the 3D-SAR analysis. These "bioactive" structures were docked to the receptor RNA, and optimization of the complex was undertaken by extensive searching of ligand conformational space coupled with molecular dynamics computations. The similarity between the bound conformations of the ligand from the 3D-SAR analysis and those found in the docking protocol suggests that this methodology is valid for the prediction of bound ligand conformations and the modeling of the structure of the ligand-RNA complexes.

  19. Photo- and electroluminescence of mixed-ligand Eu(III) complexes

    NASA Astrophysics Data System (ADS)

    Eremina, N. S.; Meshkova, S. B.; Degtyarenko, K. M.; Kopylova, T. N.; Topilova, Z. M.; Gadirov, R. M.; Samsonova, L. G.

    2012-05-01

    Spectral and luminescent properties of mixed-ligand Eu(III) complexes were studied in solutions and in polyvinylcarbazole (PVC) thin films. Trends in their variations were found depending on the complex structure and excitation mode. The electroluminescence was observed in ITO/PEDOT/Eu complex:PVC/CaMg/Al devices. Their current-voltage and voltage-brightness characteristics were investigated.

  20. DNA-interaction and in vitro antimicrobial studies of some mixed-ligand complexes of cobalt(II) with fluoroquinolone antibacterial agent ciprofloxacin and some neutral bidentate ligands.

    PubMed

    Patel, M N; Chhasatia, M R; Gandhi, D S

    2009-05-15

    Six new mixed-ligand complexes of Co(II) with ciprofloxacin (Cip) and neutral bidentate ligands have been synthesized and characterized. Binding and cleavage of DNA with the complex were investigated using spectroscopic method, viscosity measurements and gel electrophoresis techniques. Antibacterial activity has been assayed against two Gram((-ve)) and three Gram((+ve)) microorganisms using the doubling dilution technique.

  1. Ruthenium(II) polypyridyl complexes with hydrophobic ancillary ligand as Aβ aggregation inhibitors.

    PubMed

    Vyas, Nilima A; Ramteke, Shefali N; Kumbhar, Avinash S; Kulkarni, Prasad P; Jani, Vinod; Sonawane, Uddhavesh B; Joshi, Rajendra R; Joshi, Bimba; Erxleben, Andrea

    2016-10-04

    The synthesis, spectral and electrochemical characterization of the complexes of the type [Ru(NN)2(txbg)](2+) where NN is 2,2'-bipyridine (bpy) (1), 1,10-phenanthroline (phen) (2), dipyrido [3,2-d:2',3f] quinoxaline (dpq) (3), and dipyrido[3,2-a:2',3'-c]phenazine (dppz) (4) which incorporate the tetra-xylene bipyridine glycoluril (txbg) as the ancillary ligand are described in detail. Crystal structures of ligand txbg and complex 2 were solved by single crystal X-ray diffraction. Thioflavin T (ThT) fluorescence and Transmission Electron Microscopy (TEM) results indicated that at micromolar concentration all complexes exhibit significant potential of Aβ aggregation inhibition, while the ligand txbg displayed weak activity towards Aβ aggregation. Complex 1 showed relatively low inhibition (70%) while complexes 2-4 inhibited nearly 100% Aβ aggregation after 240 h of incubation. The similar potential of complexes 2-4 and absence of any trend in their activity with the planarity of polypyridyl ligands suggests there is no marked effect of planarity of coligands on their inhibitory potential. Further studies on acetylcholinesterase (AChE) inhibition indicated very weak activity of these complexes against AChE. Detailed interactions of Aβ with both ligand and complex 2 have been studied by molecular modeling. Complex 2 showed interactions involving all three polypyridyl ligands with hydrophobic region of Aβ. Furthermore, the toxicity of these complexes towards human neuroblastoma cells was evaluated by MTT assay and except complex 4, the complexes displayed very low toxicity.

  2. Copper-complexing ligands produced by an intact estuarine microbial community in response to copper stress.

    NASA Astrophysics Data System (ADS)

    Bingham, J.; Dryden, C.; Gordon, A.

    2002-12-01

    Copper is both an important nutrient and a pollutant in the marine environment. By studying the interactions between microorganisms and copper in the Elizabeth River (VA), home to a major Naval Base, we field tested the hypothesis that picoplankton and/or bacterioplankton produce strong, copper-complexing ligands in response to elevated copper concentrations. A simple light/ dark test was used to distinguish between heterotrophic and phototrophic ligand production. Samples were bottled and moored, submerged one meter, for a week. Direct counts using DAPI stain and epiflourescence were conducted to find concentrations of picoplankton and bacterioplankton. Using cathodic stripping voltammetry, we found the total copper concentrations, and then from a titration of the ligands by copper, the ligand concentrations and conditional stability constants were obtained. The Elizabeth River naturally had between 10-20 nM total dissolved copper concentrations. However when copper complexation was considered we found that the levels of bio-available Cu(II) ions were much lower. In fact in the natural samples the levels were not high enough to affect the relative reproductive rates of several microorganisms. Naturally there was a 50 nM "buffer zone" of ligand to total dissolved copper concentration. Furthermore, when stressed with excess copper, healthy picoplankton produced enough ligand to alleviate toxicity, and rebuild the buffer zone. However bacterioplankton only produced enough ligand so that they were no longer affected. Therefore, intact estuarine communities regulate copper bioavailability and toxicity with ligand production.

  3. Titanocene(III) complexes with 2-phosphinoaryloxide ligands for the catalytic dehydrogenation of dimethylamine borane.

    PubMed

    Klahn, Marcus; Hollmann, Dirk; Spannenberg, Anke; Brückner, Angelika; Beweries, Torsten

    2015-07-21

    A study of the dehydrogenation of dimethylamine borane using different titanocene(III) complexes with 2-phosphinoaryloxide ligands is presented. Complexes Cp2Ti(κ(2)-O, P-O-C6H4-PR2) (3a: R = i-Pr, 3b: R = Ph) (Cp = η(5)-cyclopentadienyl) and Cp*2Ti(κ(1)-O-O-C6H4-PR2) (5a: R = i-Pr, 5b: R = Ph) (Cp* = η(5)-pentamethylcyclopentadienyl) were prepared by reactions of the 2-phosphinophenol ligand with different titanocene sources and fully characterised. Their catalytic activity depends on the steric influence of the cyclopentadienyl ligand, the coordination mode of the 2-phosphinoaryloxide ligand and on the used solvent. Complex 3a showed a turnover number of 43.2 in the neat substrate after 24 hours. EPR investigations were used to elucidate the fate of the Ti(III) catalyst.

  4. Synthesis and characterization of cerium and yttrium alkoxide complexes supported by ferrocene-based chelating ligands.

    PubMed

    Broderick, Erin M; Thuy-Boun, Peter S; Guo, Neng; Vogel, Carola S; Sutter, Jörg; Miller, Jeffrey T; Meyer, Karsten; Diaconescu, Paula L

    2011-04-04

    Two series of Schiff base metal complexes were investigated, where each series was supported by an ancillary ligand incorporating a ferrocene backbone and different N=X functionalities. One ligand is based on an imine, while the other is based on an iminophosphorane group. Cerium(IV), cerium(III), and yttrium(III) alkoxide complexes supported by the two ligands were synthesized. All metal complexes were characterized by cyclic voltammetry. Additionally, NMR, Mössbauer, X-ray absorption near-edge structure (XANES), and absorption spectroscopies were used. The experimental data indicate that iron remains in the +2 oxidation state and that cerium(IV) does not engage in a redox behavior with the ancillary ligand.

  5. Synthesis and Characterization of Transition Metal complexes with pyrimidine based ligand derivative

    NASA Astrophysics Data System (ADS)

    Awate, Ruchita; Mishra, Ashutosh; Mansuri, A.

    2016-10-01

    The article deals with a study of Synthesis Transition Metal Complexes Like copper and iron with Pyrimidine based ligand derivatives. The synthesized complex were characterized by XRD, SEM, FTIR. Mossbauer Spectra of Iron complex has also taken out to find oxidation state of iron after complexation.The aim of this study is to preparation and characterization with Transition Metal complexes by different physical and chemical characterization techniques.

  6. Understanding M-ligand bonding and mer-/fac-isomerism in tris(8-hydroxyquinolinate) metallic complexes.

    PubMed

    Lima, Carlos F R A C; Taveira, Ricardo J S; Costa, José C S; Fernandes, Ana M; Melo, André; Silva, Artur M S; Santos, Luís M N B F

    2016-06-28

    Tris(8-hydroxyquinolinate) metallic complexes, Mq3, are one of the most important classes of organic semiconductor materials. Herein, the nature of the chemical bond in Mq3 complexes and its implications on their molecular properties were investigated by a combined experimental and computational approach. Various Mq3 complexes, resulting from the alteration of the metal and substitution of the 8-hydroxyquinoline ligand in different positions, were prepared. The mer-/fac-isomerism in Mq3 was explored by FTIR and NMR spectroscopy, evidencing that, irrespective of the substituent, mer- and fac-are the most stable molecular configurations of Al(iii) and In(iii) complexes, respectively. The relative M-ligand bond dissociation energies were evaluated experimentally by electrospray ionization tandem mass spectrometry (ESI-MS-MS), showing a non-monotonous variation along the group (Al > In > Ga). The results reveal a strong covalent character in M-ligand bonding, which allows for through-ligand electron delocalization, and explain the preferred molecular structures of Mq3 complexes as resulting from the interplay between bonding and steric factors. The mer-isomer reduces intraligand repulsions, being preferred for smaller metals, while the fac-isomer is favoured for larger metals where stronger covalent M-ligand bonds can be formed due to more extensive through-ligand conjugation mediated by metal "d" orbitals.

  7. Synthesis of nanoparticle/ligand composite thin films by sequential ligand self assembly and surface complex reduction.

    PubMed

    Muench, Falk; Fuchs, Anne; Mankel, Eric; Rauber, Markus; Lauterbach, Stefan; Kleebe, Hans-Joachim; Ensinger, Wolfgang

    2013-01-01

    Nanocomposite thin films consisting of ligand-connected metal nanoparticles were deposited by iteration of ligand assembly, surface complex formation and reduction. This novel and convenient approach combines characteristics of the layer-by-layer (LbL) and the successive ion layer adsorption and reaction (SILAR) techniques. In contrast to classical LbL assembly, the nanoparticle formation is performed in situ, avoiding separate reduction, protection and attachment steps. To demonstrate the versatility of the approach, different metal precursors (Pd, Ag and Au salts) and linkers (1,2-ethanedithiol, 1,4-benzenedithiol and polythiol) were applied. The formation of dithiol-linked nanoparticle films was confirmed by TEM and XPS. By combining the deposition protocol with ion track etched polycarbonate templates, nanotubes and nanowires with high aspect ratios of up to 300 could be fabricated. Copyright © 2012 Elsevier Inc. All rights reserved.

  8. Luminescent solutions and powders of new samarium complexes with N,N',O,O'-chelating ligands

    NASA Astrophysics Data System (ADS)

    Kharcheva, Anastasia V.; Nikolskiy, Kirill S.; Borisova, Nataliya E.; Ivanov, Alexey V.; Reshetova, Marina D.; Yuzhakov, Viktor I.; Patsaeva, Svetlana V.

    2016-04-01

    Imaging techniques in biology and medicine are crucial tools to obtain information on structural and functional properties of living cells and organisms. To fulfill the requirements associated with application of these techniques it appears necessary to design markers with specific characteristics. Luminescent complexes of trivalent lanthanide ions with chelating ligands are of increasing importance in biomedical applications because of their millisecond luminescence lifetime, narrow emission band, high signal-to-noise ratio and minimal photodamage to biological samples. In order to extend the available emission wavelength range the luminescent samarium chelates are highly desirable. In this study the ligands with diamides of 2,2'-bipyridin-6,6'-dicarboxylic acid were used to improve photophysical characteristics of samarium complexes. We report the luminescence characteristics of samarium complexes with novel ligands. All complexes exhibited the characteristic emission of Sm (III) ion with the lines at 565, 597, 605, 645 and 654 nm, the intensity strongly depended on the ligand. Absorption and luminescence excitation spectra of Sm (III) complexes showed main peaks in the UV range demonstrating lanthanide coordination to the ligand. The absolute lumenescence quantum yield was measured for solutions in acetonitrile with excitation at 350 nm. The largest luminescence quantum yield was found for the samarium complex Bipy 6MePy Sm (3%) being much higher that for samarium complexes reported in the literature earlier. These results prove as well that samarium chelates are potential markers for multiparametric imaging techniques.

  9. Conversion of a monodentate amidinate-germylene ligand into chelating imine-germanate ligands (on mononuclear manganese complexes).

    PubMed

    Cabeza, Javier A; García-Álvarez, Pablo; Pérez-Carreño, Enrique; Polo, Diego

    2014-08-18

    The unprecedented transformation of a terminal two-electron-donor amidinate-germylene ligand into a chelating three-electron-donor κ(2)-N,Ge-imine-germanate ligand has been achieved by treating the manganese amidinate-germylene complex [MnBr{Ge((i)Pr2bzam)(t)Bu}(CO)4] (1; (i)Pr2bzam = N,N'-bis(isopropyl)benzamidinate) with LiMe or Ag[BF4]. In these reactions, which afford [Mn{κ(2)Ge,N-GeMe((i)Pr2bzam)(t)Bu}(CO)4] (2) and [Mn{κ(2)Ge,N-GeF((i)Pr2bzam)(t)Bu}(CO)4] (3), respectively, the anionic nucleophile, Me(-) or F(-), ends on the Ge atom while an arm of the amidinate fragment migrates from the Ge atom to the Mn atom. In contrast, the reaction of 1 with AgOTf (OTf = triflate) leads to [Mn(OTf){Ge((i)Pr2bzam)(t)Bu}(CO)4] (4), which maintains intact the amidinate-germylene ligand. Complex 4 is very moisture-sensitive, leading to [Mn2{μ-κ(4)Ge2,O2-Ge2(t)Bu2(OH)2O}(CO)8] (5) and [(i)Pr2bzamH2]OTf (6) in wet solvents. In 5, a novel digermanate(II) ligand, [(t)Bu(OH)GeOGe(OH)(t)Bu](2-), doubly bridges two Mn(CO)4 units. The structures of 1-6 have been characterized by spectroscopic (IR, NMR) and single-crystal X-ray diffraction methods.

  10. Synthesis of several tetraaza macrocyclic amine ligands and the biodistribution of their Tc-complexes

    SciTech Connect

    Ketring, A.R.

    1982-01-01

    Several macrocyclic tetraaza ligands were synthesized and their /sup 99m/Tc-complexes prepared. The biological distribution of these complexes was examined to determine their possible utility as radiodiagnostic agents. The simplest of the macrocyclic tetraaza ligands studied, cyclam, forms a very stable cationic complex with Tc when pertechnetate is reduced with stannous ion in an aqueous solution of the ligand. When injected intravenously into mice Tc-cyclam was excreted predominantly by the urinary system. Derivatives of cyclam which were synthesized contained aromatic or aliphatic substituents and formed more lipophilic complexes with Tc. The complexes were formed in high yield as determined by paper chromatography, thin layer chromatography, electrophoresis and/or high performance liquid chromatography. Relative lipophilicities were determined for the complexes by octanol-to-water extractions. Animal studies using mice indicated there was an inverse relationship between the octanol-to-water extraction ratio and urinary excretion. Two of the complexes having relatively high octanol-to-water extraction ratios were significantly excreted by the hepatobiliary system with localization in the gall bladder. The complex having the highest octanol-to-water ratio was not excreted significantly by the hepatobiliary system, but cleared very slowly from the blood and localized in the liver, lungs, spleen and to some extent the heart. Derivatization of cyclam can be performed without greatly reducing its ability to complex Tc but greatly influencing the biological distribution of its Tc complex. This indicates that there is a potential for preparing radiodiagnostic agents using macrocyclic tetraaza ligands.

  11. Ligand Fishing: A Remarkable Strategy for Discovering Bioactive Compounds from Complex Mixture of Natural Products.

    PubMed

    Zhuo, Rongjie; Liu, Hao; Liu, Ningning; Wang, Yi

    2016-11-11

    Identification of active compounds from natural products is a critical and challenging task in drug discovery pipelines. Besides commonly used bio-guided screening approaches, affinity selection strategy coupled with liquid chromatography or mass spectrometry, known as ligand fishing, has been gaining increasing interest from researchers. In this review, we summarized this emerging strategy and categorized those methods as off-line or on-line mode according to their features. The separation principles of ligand fishing were introduced based on distinct analytical techniques, including biochromatography, capillary electrophoresis, ultrafiltration, equilibrium dialysis, microdialysis, and magnetic beads. The applications of ligand fishing approaches in the discovery of lead compounds were reviewed. Most of ligand fishing methods display specificity, high efficiency, and require less sample pretreatment, which makes them especially suitable for screening active compounds from complex mixtures of natural products. We also summarized the applications of ligand fishing in the modernization of Traditional Chinese Medicine (TCM), and propose some perspectives of this remarkable technique.

  12. Synthesis and Characterization of a Triphos Ligand Derivative and the Corresponding Pd II Complexes: Triphos Ligand Derivative and Corresponding Pd II Complexes

    SciTech Connect

    Miller, Deanna L.; Boro, Brian J.; Grubel, Katarzyna; Helm, Monte L.; Appel, Aaron M.

    2015-11-16

    The synthesis of the new bis(2-(diphenylphosphino)ethyl)methylhydroxyphosphine tridentate phosphine ligand, LCH2OH/Ph, is reported. The ligand reacts with [Pd(Cl)2(PhCN)2 to form [Pd(LCH2OH/Ph)Cl]Cl. Exchange of the chloride ions for triflate (OTf–) using AgOTf yielded pure [Pd(LCH2OH/Ph)OTf]OTf. In addition to spectral characterization the free ligand, LCH2OH/Ph, and Pd(II) complex, [Pd(LCH2OH/Ph)OTf]OTf, are structurally characterized. This research was supported by the US Department of Energy (DOE), Office of Science, Office of Basic Energy Sciences, Division of Chemical Sciences, Biosciences, and Geosciences. Pacific Northwest National Laboratory is a multiprogram national laboratory operated by Battelle for DOE.

  13. Quantitative Analysis of STD-NMR Spectra of Reversibly Forming Ligand-Receptor Complexes

    NASA Astrophysics Data System (ADS)

    Krishna, N. Rama; Jayalakshmi, V.

    We describe our work on the quantitative analysis of STD-NMR spectra of reversibly forming ligand-receptor complexes. This analysis is based on the theory of complete relaxation and conformational exchange matrix analysis of saturation transfer (CORCEMA-ST) effects. As part of this work, we have developed two separate versions of the CORCEMA-ST program. The first version predicts the expected STD intensities for a given model of a ligand-protein complex, and compares them quantitatively with the experimental data. This version is very useful for rapidly determining if a model for a given ligand-protein complex is compatible with the STD-NMR data obtained in solution. It is also useful in determining the optimal experimental conditions for undertaking the STD-NMR measurements on a given complex by computer simulations. In the second version of the CORCEMA-ST program, we have implemented a torsion angle refinement feature for the bound ligand within the protein binding pocket. In this approach, the global minimum for the bound ligand conformation is obtained by a hybrid structure refinement protocol involving CORCEMA-ST calculation of intensities and simulated annealing refinement of torsion angles of the bound ligand using STD-NMR intensities as experimental constraints to minimize a pseudo-energy function. This procedure is useful in refining and improving the initial models based on crystallography, computer docking, or other procedures to generate models for the bound ligand within the protein binding pocket compatible with solution STD-NMR data. In this chapter we describe the properties of the STD-NMR spectra, including the dependence of the intensities on various parameters. We also describe the results of the CORCEMA-ST analyses of experimental STD-NMR data on some ligand-protein complexes to illustrate the quantitative analysis of the data using this method. This CORCEMA-ST program is likely to be useful in structure-based drug design efforts.

  14. Asymmetric hydrogenation of quinazolinium salts catalysed by halide-bridged dinuclear iridium complexes bearing chiral diphosphine ligands.

    PubMed

    Kita, Yusuke; Higashida, Kosuke; Yamaji, Kenta; Iimuro, Atsuhiro; Mashima, Kazushi

    2015-03-14

    Asymmetric hydrogenation of quinazolinium salts was catalysed by halogen-bridged dinuclear iridium complexes bearing chiral diphosphine ligands, yielding tetrahydroquinazoline and 3,4-dihydroquinazoline with high enantioselectivity. A derivative of chiral dihydroquinazoline was used as a chiral NHC ligand.

  15. Highly luminescent lanthanide complexes with novel bis-β-diketone ligand: synthesis, characterization and photoluminescent properties.

    PubMed

    Li, Hong-Feng; Li, Guang-Ming; Chen, Peng; Sun, Wen-Bin; Yan, Peng-Fei

    2012-11-01

    A biphenyl-linked bis-β-diketone ligand, 3,3'-bis(3-phenyl-3-oxopropanol)biphenyl (BPB) has been prepared for the syntheses of a series of dinuclear lanthanide complexes. The ligand bears two benzoyl β-diketonate sites linked by a 3,3'-biphenyl spacer. Reaction of the doubly negatively charged bis-bidenate ligand with lanthanide ions forms triple-stranded dinuclear complexes Ln(2)(BPB)(3) (Ln=Nd (1), Sm (2), Eu (3), Yb (4) and Gd (5)). Electrospray mass spectrometry is used to identify the formation of the triple-stranded dinuclear complexes 1-5, which have been further characterized by various spectroscopic techniques. The complexes display strong visible and NIR luminescence upon excitation at ligands bands around 360 nm, depending on the choice of the lanthanides, and the emission quantum yields and luminescence lifetimes of 2-3 have been determined. It shows that the biphenyl-linked ligand BPB is a more efficient sensitizer than the monodiketone ligand DBM (dibenzoylmethane), through the comparisons of Ln(2)(BPB)(3) and Ln(DBM)(3) on their photoluminescent properties.

  16. Protonation studies of reduced ruthenium(II) complexes with polypyridyl ligands.

    PubMed

    Anderson, P A; Anderson, R F; Furue, M; Junk, P C; Keene, F R; Patterson, B T; Yeomans, B D

    2000-06-26

    The pKa values associated with protonation of the one-electron reduced forms of series of [L'2Ru(II)L]2+ complexes [L' = bidentate polypyridyl ligand; L = bidentate polypyridyl ligand with additional uncoordinated N atoms in the aromatic ring system: e.g., dpp = 2,3-bis(2-pyridyl)pyrazine, bpz = 2,2'-bipyrazine] were assessed using pulse radiolysis techniques by the measurement of spectral variations as a function of pH. A linear correlation was observed between pKa and E (RuL'2L2+/+) for complexes in which the protonatable ligand was at the same time the site of reduction. In complexes where one or more of the nonprotonatable ligands (L') had very low pi* energy levels [e.g. (CF3)4bpy], reduction occurs on a nonprotonatable ligand and a dramatic decrease in the pKa values was observed for the reduced species. In complexes where the energies of the protonatable and nonprotonatable ligands were comparable, the protonation behavior was consistent with some orbital mixing/ delocalization of the electronic charge.

  17. Highly luminescent lanthanide complexes with novel bis-β-diketone ligand: Synthesis, characterization and photoluminescent properties

    NASA Astrophysics Data System (ADS)

    Li, Hong-Feng; Li, Guang-Ming; Chen, Peng; Sun, Wen-Bin; Yan, Peng-Fei

    2012-11-01

    A biphenyl-linked bis-β-diketone ligand, 3,3'-bis(3-phenyl-3-oxopropanol)biphenyl (BPB) has been prepared for the syntheses of a series of dinuclear lanthanide complexes. The ligand bears two benzoyl β-diketonate sites linked by a 3,3'-biphenyl spacer. Reaction of the doubly negatively charged bis-bidenate ligand with lanthanide ions forms triple-stranded dinuclear complexes Ln2(BPB)3 (Ln = Nd (1), Sm (2), Eu (3), Yb (4) and Gd (5)). Electrospray mass spectrometry is used to identify the formation of the triple-stranded dinuclear complexes 1-5, which have been further characterized by various spectroscopic techniques. The complexes display strong visible and NIR luminescence upon excitation at ligands bands around 360 nm, depending on the choice of the lanthanides, and the emission quantum yields and luminescence lifetimes of 2-3 have been determined. It shows that the biphenyl-linked ligand BPB is a more efficient sensitizer than the monodiketone ligand DBM (dibenzoylmethane), through the comparisons of Ln2(BPB)3 and Ln(DBM)3 on their photoluminescent properties.

  18. Complexes with nitrogen-centered radical ligands: classification, spectroscopic features, reactivity, and catalytic applications.

    PubMed

    Olivos Suarez, Alma I; Lyaskovskyy, Volodymyr; Reek, Joost N H; van der Vlugt, Jarl Ivar; de Bruin, Bas

    2013-11-25

    The electronic structure, spectroscopic features, and (catalytic) reactivity of complexes with nitrogen-centered radical ligands are described. Complexes with aminyl ([M(˙NR2)]), nitrene/imidyl ([M(˙NR)]), and nitridyl radical ligands ([M(˙N)]) are detectable and sometimes even isolable species, and despite their radical nature frequently reveal selective reactivity patterns towards a variety of organic substrates. A classification system for complexes with nitrogen-centered radical ligands based on their electronic structure leads to their description as one-electron-reduced Fischer-type systems, one-electron-oxidized Schrock-type systems, or systems with a (nearly) covalent M-N π bond. Experimental data relevant for the assignment of the radical locus (i.e. metal or ligand) are discussed, and the application of complexes with nitrogen-centered radical ligands in the (catalytic) syntheses of nitrogen-containing organic molecules such as aziridines and amines is demonstrated with recent examples. This Review should contribute to a better understanding of the (catalytic) reactivity of nitrogen-centered radical ligands and the role they play in tuning the reactivity of coordination compounds. Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  19. Noncovalent ligand-to-ligand interactions alter sense of optical chirality in luminescent tris(β-diketonate) lanthanide(III) complexes containing a chiral bis(oxazolinyl) pyridine ligand.

    PubMed

    Yuasa, Junpei; Ohno, Tomoko; Miyata, Kohei; Tsumatori, Hiroyuki; Hasegawa, Yasuchika; Kawai, Tsuyoshi

    2011-06-29

    Highly luminescent tris[β-diketonate (HFA, 1,1,1,5,5,5-hexafluoropentane-2,4-dione)] europium(III) complexes containing a chiral bis(oxazolinyl) pyridine (pybox) ligand--[(Eu(III)(R)-Ph-pybox)(HFA)(3)], [(Eu(III)(R)-i-Pr-pybox)(HFA)(3)], and [(Eu(III)(R)-Me-Ph-pybox)(HFA)(3)])--exhibit strong circularly polarized luminescence (CPL) at the magnetic-dipole ((5)D(0) → (7)F(1)) transition, where the [(Eu(III)(R)-Ph-pybox)(HFA)(3)] complexes show virtually opposite CPL spectra as compared to those with the same chirality of [(Eu(III)(R)-i-Pr-pybox)(HFA)(3)] and [(Eu(III)(R)-Me-Ph-pybox)(HFA)(3)]. Similarly, the [(Tb(III)(R)-Ph-pybox)(HFA)(3)] complexes were found to exhibit CPL signals almost opposite to those of [(Tb(III)(R)-i-Pr-pybox)(HFA)(3)] and [(Tb(III)(R)-Me-Ph-pybox)(HFA)(3)] complexes with the same pybox chirality. Single-crystal X-ray structural analysis revealed ligand-ligand interactions between the pybox ligand and the HFA ligand in each lanthanide(III) complex: π-π stacking interactions in the Eu(III) and Tb(III) complexes with the Ph-pybox ligand, CH/F interactions in those with the i-Pr-pybox ligand, and CH/π interactions in those with the Me-Ph-pybox ligand. The ligand-ligand interactions between the achiral HFA ligands and the chiral pybox results in an asymmetric arrangement of three HFA ligands around the metal center. The metal center geometry varies depending on the types of ligand-ligand interaction.

  20. Complexation of Inorganic Mercury in Freshwaters: Spatial Variability and Ligand Sources

    NASA Astrophysics Data System (ADS)

    Black, F. J.; Flegal, A.

    2004-12-01

    The speciation, bioavailability, and toxicity of mercury in aquatic systems are substantially influenced by complexation with natural ligands. Wetlands, waste water treatment plants, and other sub-oxic environments serve as important sites for the methylation of inorganic mercury (Hg[II])to its more toxic form, monomethyl mercury (MMHg). These environments are also sources of sulfide, polysulfides, thiols, and other reduced sulfur ligands which can form strong complexes with Hg(II) and MMHg. This complexation can affect the biogeochemical cycling of mercury by altering its bioavailability, transport, and mineral phase dissolution rates. This project aims to better understand the role these unique reducing environments play in the aquatic chemistry of mercury in oxic receiving waters. A technique employing competitive ligand exchange followed by solid phase extraction (CLE-SPE) is being used to characterize the concentration and binding strengths of ligands in natural freshwaters which complex inorganic Hg(II) at environmentally relevant dissolved mercury levels. Sampling has been designed to evaluate the role of wetlands, seasonally anoxic lakes, and other reducing environments as potential sources of ligands. Their effects on the complexation of Hg(II) at downstream sites with elevated mercury levels are also investigated. The concentration, stability, and transport of these complexes, and their possible effects on the methylation and mobility of mercury, are being examined in various freshwater lakes and steams.

  1. Isolation and partial characterization of dissolved copper-complexing ligands in streamwaters.

    PubMed

    Wu, F; Tanoue, E

    2001-09-15

    We have separated two groups of copper-complexing ligands (the weak and strong ligands) from streamwaters in the Lake Biwa watershed by modified immobilized metal ion affinity chromatography (IMAC). The weak ligands were about 0.54-1.21% of the total dissolved organic matter (DOM), as determined by UV absorbance, and the strong ligands were about 0.06-0.21%. The results show that the stronger ligands were retained longer on the IMAC column, eluted later, and were accompanied by shorter wavelength UV absorbers, fluorescence maxima patterns with shorter wavelength excitation, and relatively "fresher" organic matter. The weak ligands with logK'(CuL) values of 6.6-7.7 had predominant humic-like fluorescence and may have been considerably degraded, while stronger ligands with logK'(CuL) values of 8.9-9.3 had only protein-like fluorescence and were relatively newly produced, labile material, as indicated from their amino acid composition. The protein-like fluorescence was mainly due to aromatic tryptophan probably bound to proteins or peptides. The results presented here have significant implications regarding the possible sources and biogeochemical role of organic ligands in aquatic environments.

  2. Highly active group 11 metal complexes with α-hydrazidophosphonate ligands.

    PubMed

    Salvador-Gil, Daniel; Ortego, Lourdes; Herrera, Raquel P; Marzo, Isabel; Gimeno, M Concepción

    2017-09-28

    α-Hydrazidophosphonates are interesting scaffolds that could combine the biological properties of hydrazones and phosphonyl species, and their coordination properties remain unknown. The coordination chemistry of these ligands towards group 11 metals has been studied. A series of novel gold(i), silver(i) and copper(i) complexes with α-hydrazidophosphonate ligands have been prepared and characterised. The coordination geometries obtained vary from linear to trigonal planar for gold(i) to distorted trigonal planar or tetrahedral for silver(i) and copper(i). Structural characterisation of two silver derivatives shows the ligands in an O^N^O tridentate fashion, with dissimilar bond lengths. These compounds were screened for the in vitro cytotoxic activity against two tumour human cell lines such as HeLa (cervical carcinoma) and A549 (lung carcinoma). The IC50 values reveal an excellent cytotoxic activity of the metal complexes compared with the α-hydrazidophosphonate ligands alone and cisplatin.

  3. Impact of protein binding cavity volume (PCV) and ligand volume (LV) in rigid and flexible docking of protein-ligand complexes.

    PubMed

    Saranya, N; Jeyakanthan, J; Selvaraj, S

    2012-12-15

    The importance of protein binding cavity volume (PCV) and ligand volume (LV) in rigid and flexible docking has been studied in 48 protein-ligand complexes belonging to eight protein families. In continuation of our earlier study on protein flexibility in relationship to PCV and LV, this study analyzes the importance of PCV and LV in the scoring and ranking of ligands in docking experiments. Crystal structures of protein-ligand complexes with varied PCV were chosen for docking ligands of varied volume in each protein family. Docking and scoring accuracy have been evaluated by self and cross docking of ligands to the given protein conformation. Effect of PCV and LV in rigid and flexible docking has been studied both in apo and holo proteins. Rigid docking has performed well when appropriate protein conformation is used. Selecting the proteins with appropriate PCV based on the LV information is suggested for better results in ensemble docking.

  4. VS-APPLE: A Virtual Screening Algorithm Using Promiscuous Protein-Ligand Complexes.

    PubMed

    Okuno, Tatsuya; Kato, Koya; Terada, Tomoki P; Sasai, Masaki; Chikenji, George

    2015-06-22

    As the number of structurally resolved protein-ligand complexes increases, the ligand-binding pockets of many proteins have been found to accommodate multiple different compounds. Effective use of these structural data is important for developing virtual screening (VS) methods that identify bioactive compounds. Here, we introduce a VS method, VS-APPLE (Virtual Screening Algorithm using Promiscuous Protein-Ligand complExes), based on promiscuous protein-ligand binding structures. In VS-APPLE, multiple ligands bound to a pocket are combined into a query template for screening. Both the structural match between a test compound and the multiple-ligand template and the possible collisions between the test compound and the target protein are evaluated by an efficient geometric hashing method. The performance of VS-APPLE was examined on a filtered, clustered version of the Directory of Useful Decoys data set. In Area Under the Curve analyses of this data set, VS-APPLE outperformed several popular screening programs. Judging from the performance of VS-APPLE, the structural data of promiscuous protein-ligand bindings could be further analyzed and exploited for developing VS methods.

  5. Selective Structural Transformation of Supramolecules to Multinuclear Heterosubstituted Pt Complexes via Ligand Exchange.

    PubMed

    Molev, Gregory; Arif, Atta; Stang, Peter J

    2011-11-16

    Selective triflate to chlorine ligand exchange reaction between ditriflate and dichloride Pt complexes producing pure heterosubstituted complexes is demonstrated. We show that this reaction can be applied for selective chlorination of supramolecules leading to their structural transformation into multinuclear mono-chlorinated Pt(II) complexes. The X-ray structure of complex of 4,4'-bipyridine with two molecules of (Et(3)P)(2)Pt(Cl)OTf is reported.

  6. A Stable Monomeric SiO2 Complex with Donor-Acceptor Ligands.

    PubMed

    Rodriguez, Ricardo; Gau, David; Saouli, Jérémy; Baceiredo, Antoine; Saffon-Merceron, Nathalie; Branchadell, Vicenç; Kato, Tsuyoshi

    2017-03-27

    Isolation of a monomeric SiO2 compound 3 as a stable donor-acceptor complex with two different ligands -a σ-donating ligand (pyridine, dimethylaminopyridine, N-heterocyclic carbene) and a donor-acceptor ligand (iminophosphorane)-is presented. The SiO2 complex 3 is soluble in ordinary organic solvents and is stable at room temperature in solution and in the solid state. Of particular interest, 3 remains reactive and can be used as a stable and soluble unimolecular SiO2 reagent.

  7. Dinuclear palladium complexes with two ligand-centered radicals and a single bridging ligand: subtle tuning of magnetic properties.

    PubMed

    Broere, Daniël L J; Demeshko, Serhiy; de Bruin, Bas; Pidko, Evgeny A; Reek, Joost N H; Siegler, Maxime A; Lutz, Martin; van der Vlugt, Jarl Ivar

    2015-04-07

    The facile and tunable preparation of unique dinuclear [(L(⋅))Pd-X-Pd(L(⋅))] complexes (X = Cl or N3), bearing a ligand radical on each Pd, is disclosed, as well as their magnetochemistry in solution and solid state is reported. Chloride abstraction from [PdCl(NNO(ISQ))] (NNO(ISQ) = iminosemiquinonato) with TlPF6 results in an unusual monochlorido-bridged dinuclear open-shell diradical species, [{Pd(NNO(ISQ))}2(μ-Cl)](+), with an unusually small Pd-Cl-Pd angle (ca. 93°, determined by X-ray). This suggests an intramolecular d(8)-d(8) interaction, which is supported by DFT calculations. SQUID measurements indicate moderate antiferromagnetic spin exchange between the two ligand radicals and an overall singlet ground state in the solid state. VT EPR spectroscopy shows a transient signal corresponding to a triplet state between 20 and 60 K. Complex 2 reacts with PPh3 to generate [Pd(NNO(ISQ))(PPh3)](+) and one equivalent of [PdCl(NNO(ISQ))]. Reacting an 1:1 mixture of [PdCl(NNO(ISQ))] and [Pd(N3)(NNO(ISQ))] furnishes the 1,1-azido-bridged dinuclear diradical [{Pd(NNO(ISQ))}2(κ(1)-N;μ-N3](+), with a Pd-N-Pd angle close to 127° (X-ray). Magnetic and EPR measurements indicate two independent S = 1/2 spin carriers and no magnetic interaction in the solid state. The two diradical species both show no spin exchange in solution, likely because of unhindered rotation around the Pd-X-Pd core. This work demonstrates that a single bridging atom can induce subtle and tunable changes in structural and magnetic properties of novel dinuclear Pd complexes featuring two ligand-based radicals. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  8. Synthesis and luminescence properties of lanthanide complexes with a new tripodal ligands featuring salicylamide arms.

    PubMed

    Song, Xue-Qin; Dong, Wen-Kui; Zhang, Yu-Jie; Liu, Wei-Sheng

    2010-01-01

    A series of luminescent lanthanide complexes with a new tripodal ligand featuring salicylamide arms, 2,2',2''-nitrilotris(2-furfurylaminoformylphenoxy)triethylamine (L), were synthesized and characterized by elemental analysis, IR and molar conductivity measurements. Photophysical properties of the complexes were studied by means of UV-vis absorption and steady-state luminescence spectroscopy. Excited-state luminescence lifetimes and quantum yield of the complexes were determined. Luminescence studies demonstrated that the tripodal ligand featuring salicylamide arms exhibits a good antennae effect with respect to the Tb(III) and Dy(III) ion due to efficient intersystem crossing and ligand to metal energy transfer. From a more general perspective, this work offers interesting perspectives for the development of efficient luminescent stains and enlarges the arsenal for developing novel luminescent lanthanide complexes of salicylamide derivatives. Copyright (c) 2009 John Wiley & Sons, Ltd.

  9. Computational titration analysis of a multiprotic HIV-1 protease-ligand complex.

    PubMed

    Spyrakis, Francesca; Fornabaio, Micaela; Cozzini, Pietro; Mozzarelli, Andrea; Abraham, Donald J; Kellogg, Glen E

    2004-09-29

    A new computational method for analyzing the protonation states of protein-ligand complexes with multiple ionizable groups is applied to the structurally characterized complex between the peptide Glu-Asp-Leu and HIV-1 protease. This complex has eight ionizable groups at the active site: four from the ligand and four Asp residues on the protein. Correlation, with an error of ca. 0.6 kcal mol-1, is made between the calculated titration curve and the experimental titration curve. The analysis suggests that between four and five of the eight ionizable groups are protonated at the pH of crystallization.

  10. Abiotic reduction of nitroaromatic contaminants by iron(II) complexes with organothiol ligands.

    PubMed

    Naka, Daisuke; Kim, Dongwook; Carbonaro, Richard F; Strathmann, Timothy J

    2008-06-01

    Complexation of Fe(II) by dissolved and surface-bound ligands can significantly modify the metal's redox reactivity, and recent work reveals that Fe(II) complexes with selected classes of organic ligands are potent reductants that may contribute to the natural attenuation of subsurface contaminants. In the present study, we investigated the reactivity of Fe(II)-organothiol ligand complexes with nitroaromatic contaminants (NACs; ArNO(2)). Experimental results show that NACs are unreactive in Fe(2+)-only and ligand-only solutions but are reduced to the corresponding aniline compounds (ArNH(2)) in solutions containing both Fe(II) and a number of organothiol ligands. Observed reaction rates are highly dependent on the structure of the Fe(II)-complexing ligand, solution composition, Fe(II) speciation, and NAC structure. For two model ligands, cysteine and thioglycolic acid, observed pseudo-first order rate constants for 4-chloronitrobenzene reduction (k(obs); 1/s) are linearly correlated with the concentration of the respective 1:2 Fe(II)- organothiol complexes (FeL(2)(2-)), and k(obs) measurements are accurately predicted by k(obs) = k(FeL(2-)(2))[FeL(2-)(2)], where k(FeL(2-)(2)) = 1.70 (+/-0.59) 1/M/s and 26.0 (+/-4.8) 1/M/s for cysteine and thioglycolic acid, respectively. The high reactivity of these Fe(II) complexes is attributed to a lowering of the standard one-electron reduction potential of the Fe(III)/Fe(II) redox couple on complexation by organothiol ligands. The relative reactivity of a series of substituted NACs with individual Fe(II) complexes can be described by linear free-energy relationships with the apparent one-electron reduction potentials of the NACs. Tests also show that organothiol ligands can further promote NAC reduction indirectly by re-reducing the Fe(III) that forms when Fe(II) complexes are oxidized by reactions with the NACs.

  11. Four transition metal complexes with a semicarbazone ligand bearing pyrazine unit

    NASA Astrophysics Data System (ADS)

    Chen, Hong; Ma, Xiu-qin; Lv, Yan-yun; Jia, Lei; Xu, Jun; Wang, Yuan; Ge, Zhi-jun

    2016-04-01

    Four new complexes based on L (where L = 3-ethyl-2-acetylpyrazine semicarbazone), namely [CoL2]Cl2·0.5H2O (1), [CoL2](NO3)2 (2), [CdL(H2O)2(NO3)](NO3)·H2O (3) and [CuL(CH3OH)Cl2]·[CuLCl2] (4) have been synthesized and characterized by X-ray diffraction analyses. The results show that the semicarbazone acts as a tridentate neutral ligand in all complexes. Each of complex 1 and 2 reveals a distorted octahedral geometry around the metal ion provided by two units of the ligand, while the ratio of the ligand and metal is 1:1 in complexes 3 and 4. The effect of complexes 1-4 on cell proliferation, apoptosis of human pancreatic cancer (Patu8988), human gastric cancer (SGC7901) and human hepatic cancer (SMMC7721) cell lines have been detected by MTT assay, Annexin V/PI double staining flow cytometry and TUNEL assay. The results show that complexes 1-4 can inhibit cell proliferation of Patu8988, SGC7901 and SMMC7721 cells, significantly higher than the effect of the ligand. However, the complex 4 reveals higher apoptosis rate, and displays up-regulated expression level of caspase 3, detected by western blotting, which also indicates the complex 4 can induce caspase-dependent cell apoptosis in SMMC7721.

  12. Enthused research on DNA-binding and DNA-cleavage aptitude of mixed ligand metal complexes

    NASA Astrophysics Data System (ADS)

    Mahalakshmi, Rajkumar; Raman, Natarajan

    2013-08-01

    Five new Mn(II), Co(II), Ni(II), Cu(II) and Zn(II) mixed ligand complexes have been synthesized using a Schiff base precursor (obtained by the condensation of N-(4-aminophenyl)acetamide and 4-chlorobenzaldehyde) as main ligand and 1,10-phenanthroline as co-ligand. They have been characterized by microanalytical data, IR, UV-Vis, magnetic moment values, conductivity and electrochemical measurements. The spectral data reveal that all the complexes exhibit octahedral geometry. The high electrical conductance of the complexes supports their electrolytic nature. The monomeric nature of the complexes has been assessed from their magnetic susceptibility values. These complexes are better antimicrobial active agents than the free ligands. DNA (CT) binding properties of these complexes have been explored by UV-Vis., viscosity measurements, cyclic voltammetry, and differential pulse voltammetry measurements. The oxidative cleavage activity of the complexes has been studied using supercoiled pUC19 DNA by gel electrophoresis. The experimental results show that the complexes are good intercalators.

  13. Enthused research on DNA-binding and DNA-cleavage aptitude of mixed ligand metal complexes.

    PubMed

    Mahalakshmi, Rajkumar; Raman, Natarajan

    2013-08-01

    Five new Mn(II), Co(II), Ni(II), Cu(II) and Zn(II) mixed ligand complexes have been synthesized using a Schiff base precursor (obtained by the condensation of N-(4-aminophenyl)acetamide and 4-chlorobenzaldehyde) as main ligand and 1,10-phenanthroline as co-ligand. They have been characterized by microanalytical data, IR, UV-Vis, magnetic moment values, conductivity and electrochemical measurements. The spectral data reveal that all the complexes exhibit octahedral geometry. The high electrical conductance of the complexes supports their electrolytic nature. The monomeric nature of the complexes has been assessed from their magnetic susceptibility values. These complexes are better antimicrobial active agents than the free ligands. DNA (CT) binding properties of these complexes have been explored by UV-Vis., viscosity measurements, cyclic voltammetry, and differential pulse voltammetry measurements. The oxidative cleavage activity of the complexes has been studied using supercoiled pUC19 DNA by gel electrophoresis. The experimental results show that the complexes are good intercalators.

  14. Ligand Rearrangements of Organometallic Complexes inSolution

    SciTech Connect

    Shanoski, Jennifer E.

    2006-01-01

    Many chemical reactions utilize organometallic complexes as catalysts. These complexes find use in reactions as varied as bond activation, polymerization, and isomerization. This thesis outlines the construction of a new ultrafast laser system with an emphasis on the generation of tunable mid-infrared pulses, data collection, and data analysis.

  15. Synthesis, spectral and electrochemical studies of binuclear Ru(III) complexes containing dithiosemicarbazone ligand.

    PubMed

    Kanchana Devi, A; Ramesh, R

    2014-01-03

    Synthesis of several new octahedral binuclear ruthenium(III) complexes of the general composition [(EPh3)2(X)Ru-L-Ru(X)(EPh3)2] containing benzene dithiosemicarbazone ligands (where E=P or As; X=Cl or Br; L=binucleating ligands) is presented. All the complexes have been fully characterized by elemental analysis, FT-IR, UV-vis and EPR spectroscopy together with magnetic susceptibility measurements. IR study shows that the dithiosemicarbazone ligands behave as dianionic tridentate ligands coordinating through the oxygen atom of the deprotonated phenolic group, nitrogen atom of the azomethine group and thiolate sulphur. In DMF solution, all the complexes exhibit intense d-d transition and ligand-to-metal charge transfer (LMCT) transition in the visible region. The magnetic moment values of the complexes are in the range 1.78-1.82 BM, which reveals the presence of one unpaired electron on each metal ion. The EPR spectra of the liquid samples at LNT show the presence of three different 'g' values (gx≠gy≠gz) indicate a rhombic distortion around the ruthenium ion. All the complexes exhibit two quasi-reversible one electron oxidation responses (Ru(III)-Ru(III)/Ru(III)-Ru(IV); Ru(III)-Ru(IV)/Ru(IV)-Ru(IV)) within the E1/2 range of 0.61-0.74 V and 0.93-0.98 V respectively, versus Ag/AgCl.

  16. Circularly Polarized Luminescence in Enantiopure Europium and Terbium Complexes with Modular, All-Oxygen Donor Ligands

    PubMed Central

    Seitz, Michael; Do, King; Ingram, Andrew J.; Moore, Evan G.; Muller, Gilles; Raymond, Kenneth N.

    2009-01-01

    Abstract: Circulaly polarized luminescence from terbium(III) complexed and excited by chiral antenna ligands gives strong emission The modular synthesis of three new octadentate, enantiopure ligands are reported - one with the bidentate chelating unit 2-hydroxyisophthalamide (IAM) and two with 1-hydroxy-2-pyridinone (1,2-HOPO) units. A new design principle is introduced for the chiral, non-racemic hexamines which constitute the central backbones for the presented class of ligands. The terbium(III) complex of the IAM ligand, as well as the europium(III) complexes of the 1,2-HOPO ligands are synthesized and characterized by various techniques (NMR, UV, CD, luminescence spectroscopy). All species exhibit excellent stability and moderate to high luminescence efficiency (quantum yields ΦEu = 0.05–0.08 and ΦTb = 0.30–0.57) in aqueous solution at physiological pH. Special focus is put onto the properties of the complexes in regard to circularly polarized luminescence (CPL). The maximum luminescence dissymmetry factors (glum) in aqueous solution are high with |glum|max = 0.08 – 0.40. Together with the very favorable general properties (good stability, high quantum yields, long lifetimes), the presented lanthanide complexes can be considered as good candidates for analytical probes based on CPL in biologically relevant environments. PMID:19639983

  17. Synthesis, spectral and electrochemical studies of binuclear Ru(III) complexes containing dithiosemicarbazone ligand

    NASA Astrophysics Data System (ADS)

    Kanchana Devi, A.; Ramesh, R.

    2014-01-01

    Synthesis of several new octahedral binuclear ruthenium(III) complexes of the general composition [(EPh3)2(X)Ru-L-Ru(X)(EPh3)2] containing benzene dithiosemicarbazone ligands (where E = P or As; X = Cl or Br; L = binucleating ligands) is presented. All the complexes have been fully characterized by elemental analysis, FT-IR, UV-vis and EPR spectroscopy together with magnetic susceptibility measurements. IR study shows that the dithiosemicarbazone ligands behave as dianionic tridentate ligands coordinating through the oxygen atom of the deprotonated phenolic group, nitrogen atom of the azomethine group and thiolate sulphur. In DMF solution, all the complexes exhibit intense d-d transition and ligand-to-metal charge transfer (LMCT) transition in the visible region. The magnetic moment values of the complexes are in the range 1.78-1.82 BM, which reveals the presence of one unpaired electron on each metal ion. The EPR spectra of the liquid samples at LNT show the presence of three different 'g' values (gx ≠ gy ≠ gz) indicate a rhombic distortion around the ruthenium ion. All the complexes exhibit two quasi-reversible one electron oxidation responses (RuIII-RuIII/RuIII-RuIV; RuIII-RuIV/RuIV-RuIV) within the E1/2 range of 0.61-0.74 V and 0.93-0.98 V respectively, versus Ag/AgCl.

  18. Ligand-bridged rhenium(I) complexes: An electrochemical and photophysical study

    SciTech Connect

    Yoblinski, B.J.; Stathis, M.; Guarr, T.F. )

    1992-01-08

    The synthesis and properties of a series of rhenium(I) carbonyls incorporating the bidentate bridging ligands 4{prime},7{prime}-phenanthrolino-5{prime},6{prime}:5,6-pyrazine (ppz), 2,3-bis(2-pyridyl)pyrazine (bppz), and 6,7-dimethyl-2,3-bis(2-pyridyl)quinoxaline (ddpq) have been investigated. All mononuclear complexes are emissive in room-temperature fluid solution; the luminescence originates from an MLCT excited state. On the other hand, emission was detected for only one of the binuclear complexes, ((ppz)(Re-(CO){sub 3}(CH{sub 3}CN)){sub 2}){sup 2+}. The lack of emission from the remaining binuclear species is attributed to the perturbation of the {pi}* orbital on the bridging ligand that results from the attachment of the second metal center. The magnitude of this effect has been probed by electrochemical and spectroscopic experiments. Lifetime measurements confirm the existence of a correlation between MLCT energy and the nonradiative decay rate, and the observed trend is in at least qualitative agreement with the energy gap law. Variations in the quantum yield for emission between similar complexes possessing different bridging ligands are attributed to changes in ligand rigidity, and complexes of ppz exhibit the largest {phi}{sub em} values. Not only are the corresponding bppz and ddpq derivatives much weaker emitters, but steric interactions lead to the thermal decomposition of binuclear complexes based on these ligands.

  19. Stereochemical Properties of Multidentate Nitrogen Donor Ligands and Their Copper Complexes by Electronic CD and DFT.

    PubMed

    Poopari, Mohammad Reza; Dezhahang, Zahra; Xu, Yunjie

    2016-07-01

    UV-Vis and electronic circular dichroism (ECD) spectroscopy, complemented with Density Functional Theory (DFT) calculations, were used to elucidate the structural diversities of three multidentate nitrogen donor ligands and two associated copper complexes in solution directly. The three chiral salen ligands all consist of trans-cyclohexane-1,2-diamine as a chiral scaffold and also of pyridine rings as chromophores, differing only in the linking groups between the two functional groups mentioned above. Very different ECD intensities and somewhat different ECD patterns were observed for these ligands and satisfactorily interpreted theoretically. For the geometry optimization and spectral simulation of the open-shell metal complexes, the LANL2DZ basis set with effective core potential for the Cu and Cl atoms and pure cc-pVTZ for the rest of the atoms was utilized. The performance of the same calculations with the polarization functions (f,g) from the cc-pVTZ basis added to the LANL2DZ basis was compared. While the three ligands exhibit different conformational flexibility, the associated copper complexes show great rigidity imposed by the metal-ligand coordination, taking on a single structure in each case. In addition, dispersion interactions were shown to change the conformational stability ordering of the ligands noticeably and to exert considerable influence on the simulated UV-Vis and ECD spectra. Chirality 28:545-555, 2016. © 2016 Wiley Periodicals, Inc.

  20. Reductive Cleavage of CO2 by Metal-Ligand-Cooperation Mediated by an Iridium Pincer Complex.

    PubMed

    Feller, Moran; Gellrich, Urs; Anaby, Aviel; Diskin-Posner, Yael; Milstein, David

    2016-05-25

    A unique mode of stoichiometric CO2 activation and reductive splitting based on metal-ligand-cooperation is described. The novel Ir hydride complexes [((t)Bu-PNP*)Ir(H)2] (2) ((t)Bu-PNP*, deprotonated (t)Bu-PNP ligand) and [((t)Bu-PNP)Ir(H)] (3) react with CO2 to give the dearomatized complex [((t)Bu-PNP*)Ir(CO)] (4) and water. Mechanistic studies have identified an adduct in which CO2 is bound to the ligand and metal, [((t)Bu-PNP-COO)Ir(H)2] (5), and a di-CO2 iridacycle [((t)Bu-PNP)Ir(H)(C2O4-κC,O)] (6). DFT calculations confirm the formation of 5 and 6 as reversibly formed side products, and suggest an η(1)-CO2 intermediate leading to the thermodynamic product 4. The calculations support a metal-ligand-cooperation pathway in which an internal deprotonation of the benzylic position by the η(1)-CO2 ligand leads to a carboxylate intermediate, which further reacts with the hydride ligand to give complex 4 and water.

  1. Synthesis, Characterization, and Reactivity Studies of Iron Complexes Supported by the Redox-Active [ONO] Ligand

    NASA Astrophysics Data System (ADS)

    Wong, Janice Lin

    The work reported herein primarily focuses on the development of new platforms for multi-electron reactivity using iron complexes supported by a redox-active pincer-type ligand. This dissertation details the synthesis, characterization, and reactivity of iron complexes coordinated to the redox-active [ONO] ([ONO]H3 = bis(3,5-di-tert-butyl-2-phenol)amine) ligand. Chapter 1 provides a general background on ligand-centered and metal-centered redox reactivity. Specifically, the characteristics of redox-active ligands and their ability to promote multi-electron reactivity at redox-inert metal centers is presented. In addition, iron-catalyzed organic transformations in which the metal center undergoes redox changes is also discussed. Finally, ligand-enabled redox reactions mediated by iron complexes containing redox-active ligands is described. Chapter 2 reports on the complexation of bis(3,5-di-tert-butyl-2-phenoxy)amine, [ONHO], and the redox-active [ONO] ligands by iron centers to afford a new family of iron complexes. Characterizations of each compound through a battery of analytical techniques reveal the oxidation states of the metal center and ligand. Furthermore, the electronic properties of each complex were investigated in order to evaluate their potential to facilitate multi-electron reactivity. Chapter 3 details the reactivity of the [ONO]Fe platform. Metathesis reactions are conducted with [ONOq]FeIIIX 2 (X = Cl, N[SiMe3]2) complexes, demonstrating the capability of the fully-oxidized [ONOq]1-- to act as a two-electron acceptor to generate the fully reduced [ONO cat]3-- that is coordinated to an iron(III) center. Similarly, oxidation of [ONOcat]FeIII(py) 3 (py = pyridine) using dihalogens result in two-electron oxidations of the tridentate ligand while the metal oxidation state remains the same. These redox reactions showcase the ability of the [ONO] ligand platform to undergo reversible two-electron oxidation state changes, allowing multi-electron reactivity

  2. Affinity of An(VI) for N4-Tetradentate Donor Ligands: Complexation of the Actinyl(VI) Ions with N4-Tetradentate Ligands

    SciTech Connect

    Ogden, Mark; Sinkov, Sergey I.; Lumetta, Gregg J.; Nash, Kenneth L.

    2012-05-01

    In this report the affinity of four N4-tetradentate ligands that incorporate the 2- methylpyridyl functionality with hexavalent actinides (AnO2+2 ) has been investigated in methanol solution. The ligands studied include N,N*-bis(2-methylpyridyl)diaminoethane (BPMDAE), N,N-bis(2-methylpyridyl)-1,3-diaminopropane (BPMDAP), N,N*-bis(2-pyridylmethyl) piperazine (BPMPIP), and trans-N,N-bis(2-pyridylmethyl)-1,2-diaminocyclohexane (BPMDAC). Conditional stability constants describing the strength of the interaction were determined by UV-visible spectrophotometry. The log10K101 values for both U(VI) and Pu(VI) are comparable and show the same trend of stability with ligand structure. Dinuclear complexes are also indicated as being important. The log10K201 values for Pu(VI) complexation with the N4-ligands are identical for the four ligands (within experimental error), indicating that the structure of the ligand backbone has little effect on the stability of the (PuO2)2L2+ complex. The exception to this trend is the behavior of N,N*- bis(2-pyridylmethyl)piperazine (BPMPIP) with Pu(VI). This ligand displays a tendency to reduce Pu(VI) within the experimental time frame of 45 minutes. BPMPIP is the only ligand tested that contains tertiary amines in the ligand backbone. The decomposition of BPMPIP by Pu(VI) suggests a susceptibility of tertiary amines to oxidative degradation.

  3. Synthesis and antimalarial activity of metal complexes of cross-bridged tetraazamacrocyclic ligands.

    PubMed

    Hubin, Timothy J; Amoyaw, Prince N-A; Roewe, Kimberly D; Simpson, Natalie C; Maples, Randall D; Carder Freeman, TaRynn N; Cain, Amy N; Le, Justin G; Archibald, Stephen J; Khan, Shabana I; Tekwani, Babu L; Khan, M O Faruk

    2014-07-01

    Using transition metals such as manganese(II), iron(II), cobalt(II), nickel(II), copper(II), and zinc(II), several new metal complexes of cross-bridged tetraazamacrocyclic chelators namely, cyclen- and cyclam-analogs with benzyl groups, were synthesized and screened for in vitro antimalarial activity against chloroquine-resistant (W2) and chloroquine-sensitive (D6) strains of Plasmodium falciparum. The metal-free chelators tested showed little or no antimalarial activity. All the metal complexes of the dibenzyl cross-bridged cyclam ligand exhibited potent antimalarial activity. The Mn(2+) complex of this ligand was the most potent with IC50s of 0.127 and 0.157μM against the chloroquine-sensitive (D6) and chloroquine-resistant (W2) P. falciparum strains, respectively. In general, the dibenzyl hydrophobic ligands showed better anti-malarial activity compared to the activity of monobenzyl ligands, potentially because of their higher lipophilicity and thus better cell penetration ability. The higher antimalarial activity displayed by the manganese complex for the cyclam ligand in comparison to that of the cyclen, correlates with the larger pocket of cyclam compared to that of cyclen which produces a more stable complex with the Mn(2+). Few of the Cu(2+) and Fe(2+) complexes also showed improvement in activity but Ni(2+), Co(2+) and Zn(2+) complexes did not show any improvement in activity upon the metal-free ligands for anti-malarial development. Published by Elsevier Ltd.

  4. Synthesis and luminescence properties of iridium complexes chelated with coumarin ligands.

    PubMed

    Park, Hye Rim; Kim, Bo Young; Kim, Young Kwan; Ha, Yunkyoung

    2013-05-01

    According to a recent report, the organic light-emitting diodes (OLEDs) using the iridium complexes of coumarin derivatives as emissive dopants are highly efficient and stable. Unlike the other Ir(III) phopsphorescent dopants, these coumarin-based Ir(III) complexes can effectively trap and transport electrons in the emissive layer. We have prepared a series of phosphorescent cyclometalated Ir(III) complexes containing 3-(2-pyridinyl)coumarin (pc) as an ancillary ligand. The new heteroleptic iridium complexes, Ir(C--N)2(pc) (CAN = 2-(2,4-difluorophenyl)pyridine (F2-ppy), 2-phenylpyridine (ppy) and 2-phenylquinoline (pq)) were characterized by 1H NMR and mass spectrometer. As main ligands, F2-ppy, ppy and pq were employed, which should have the drastically different ligand molecular orbital energy levels. The iridium complexes showed various emission ranges from 560 to 610 nm, depending upon the relative energy levels of their main and ancillary ligands. The photoabsorption, photoluminescence and electroluminescence of the complexes were studied. We also investigated the electrochemical properties of the iridium complexes to compare the HOMO and LUMO energy levels of these phosphorescent materials.

  5. Macrocyclic bis(ureas) as ligands for anion complexation

    PubMed Central

    Kretschmer, Claudia; Dittmann, Gertrud

    2014-01-01

    Summary Two macrocyclic bis(ureas) 1 and 2, both based on diphenylurea, have been synthesized. Compound 1 represents the smaller ring with two ethynylene groups as linkers and 2 the larger ring with two butadiynylene groups. On thermal treatment to 130 °C molecule 1 splits up into two dihydroindoloquinolinone (3) molecules. Both compounds 1 and 2 form adducts with polar molecules such as dimethyl sulfoxide (DMSO) and dimethylformamide (DMF) and act as complexing agents towards a series of anions (Cl−, Br−, I−, NO3 −, HSO4 −). The crystal structures of 3, 2·2DMSO, 2·2DMF, and of the complex NEt4[Br·2] have been determined. Quantitative investigations of the complexation equilibria were performed via 1H NMR titrations. While 1 is a rather weak complexing agent, the large ring of 2 binds anions with association constants up to log K = 7.93 for chloride ions. PMID:25161744

  6. Copper(II) complexes with heterocyclic hydroxyimino-containing ligands

    SciTech Connect

    Kogan, V.A.; Burlov, A.S.; Popov, L.D.; Lukov, V.V.; Koshchienko, Yu.V.; Tsupak, E.B.; Barchan, G.P.; Chigarenko, G.G.; Bolotnikov, V.S.

    1988-05-01

    The reaction of oximes (R = Ph (L'), C=N (L'')) with the copper(II) salts CuA/sub 2/ in methanol has given the complexes CuL/sub 2/ ' x H/sub 2/O and CuL/sub 2//sup ''/ x 2H/sub 2/O (I) (A = Acet/sup -/), CuHLCl/sub 2/ x H/sub 2/O (II) (A = Cl/sup -/), CuLOH(ClO/sub 4/)/sub 2/ x 2H/sub 2/O (III) (A = ClO/sub 4//sup -/) and the complexes Cu/sub 3/L/sub 3//sup '/OH(NO/sub 3/)/sub 2/ and Cu/sub 3/L/sub 3//sup ''/(OH)/sub 2/NO/sub 3/ (IV) (A = NO/sub 3//sup -/). Their physicochemical properties have been studied by the methods of IR spectroscopy and magnetochemistry. It has been shown that complexes I have a chelate structure and that their magnetic moments are not dependent on the temperature. An anti-ferromagnetic exchange interaction takes place in complexes II-IV. On the basis of magnetochemical measurements over a broad temperature range and data calculated in the framework of the Heisenberg-Dirac-Van Vleck model of isotropic exchange interactions, a dimeric structure has been proposed for the complexes of type II, and a trinuclear cluster structure has been proposed for complexes III and IV.

  7. CO2 hydrogenation catalyzed by iridium complexes with a proton-responsive ligand

    SciTech Connect

    Onishi, Naoya; Xu, Shaoan; Manaka, Yuichi; Suna, Yuki; Wang, Wan -Hui; Muckerman, James T.; Fujita, Etsuko; Himeda, Yuichiro

    2015-02-18

    In this study, the catalytic cycle for the production of formic acid by CO₂ hydrogenation and the reverse reaction has received renewed attention because they are viewed as offering a viable scheme for hydrogen storage and release. In this Forum Article, CO₂ hydrogenation catalyzed by iridium complexes bearing N^N-bidentate ligands is reported. We describe how a ligand containing hydroxyl groups as proton-responsive substituents enhances catalytic performance by an electronic effect of the oxyanions and a pendent-base effect through secondary coordination sphere interaction. In particular, [(Cp*IrCl)₂(TH2BPM)]Cl₂ (Cp* = pentamethyl cyclopentadienyl, TH2BPM = 4,4',6,6'-tetrahydroxy-2,2'-bipyrimidine) promotes enormously the catalytic hydrogenation of CO₂ by these synergistic effects under atmospheric pressure and at room temperature. Additionally, newly designed complexes with azole-type ligands are applied to CO₂ hydrogenation. The catalytic efficiencies of the azole-type complexes are much higher than that of the unsubstituted bipyridine complex [Cp*Ir(bpy)(OH₂)]SO₄. Furthermore, the introduction of one or more hydroxyl groups into ligands such as 2-pyrazolyl-6-hydroxypyridine, 2-pyrazolyl-4,6-dihydroxyl pyrimidine, and 4-pyrazolyl-2,6-dihydroxyl pyrimidine enhanced catalytic activity. It is clear that the incorporation of electron-donating hydroxyl groups into proton-responsive ligands is effective for promoting the hydrogenation of CO₂.

  8. CO2 hydrogenation catalyzed by iridium complexes with a proton-responsive ligand

    DOE PAGES

    Onishi, Naoya; Xu, Shaoan; Manaka, Yuichi; ...

    2015-02-18

    In this study, the catalytic cycle for the production of formic acid by CO₂ hydrogenation and the reverse reaction has received renewed attention because they are viewed as offering a viable scheme for hydrogen storage and release. In this Forum Article, CO₂ hydrogenation catalyzed by iridium complexes bearing N^N-bidentate ligands is reported. We describe how a ligand containing hydroxyl groups as proton-responsive substituents enhances catalytic performance by an electronic effect of the oxyanions and a pendent-base effect through secondary coordination sphere interaction. In particular, [(Cp*IrCl)₂(TH2BPM)]Cl₂ (Cp* = pentamethyl cyclopentadienyl, TH2BPM = 4,4',6,6'-tetrahydroxy-2,2'-bipyrimidine) promotes enormously the catalytic hydrogenation of CO₂ bymore » these synergistic effects under atmospheric pressure and at room temperature. Additionally, newly designed complexes with azole-type ligands are applied to CO₂ hydrogenation. The catalytic efficiencies of the azole-type complexes are much higher than that of the unsubstituted bipyridine complex [Cp*Ir(bpy)(OH₂)]SO₄. Furthermore, the introduction of one or more hydroxyl groups into ligands such as 2-pyrazolyl-6-hydroxypyridine, 2-pyrazolyl-4,6-dihydroxyl pyrimidine, and 4-pyrazolyl-2,6-dihydroxyl pyrimidine enhanced catalytic activity. It is clear that the incorporation of electron-donating hydroxyl groups into proton-responsive ligands is effective for promoting the hydrogenation of CO₂.« less

  9. Formal Estimation of Errors in Computed Absolute Interaction Energies of Protein-ligand Complexes

    PubMed Central

    Faver, John C.; Benson, Mark L.; He, Xiao; Roberts, Benjamin P.; Wang, Bing; Marshall, Michael S.; Kennedy, Matthew R.; Sherrill, C. David; Merz, Kenneth M.

    2011-01-01

    A largely unsolved problem in computational biochemistry is the accurate prediction of binding affinities of small ligands to protein receptors. We present a detailed analysis of the systematic and random errors present in computational methods through the use of error probability density functions, specifically for computed interaction energies between chemical fragments comprising a protein-ligand complex. An HIV-II protease crystal structure with a bound ligand (indinavir) was chosen as a model protein-ligand complex. The complex was decomposed into twenty-one (21) interacting fragment pairs, which were studied using a number of computational methods. The chemically accurate complete basis set coupled cluster theory (CCSD(T)/CBS) interaction energies were used as reference values to generate our error estimates. In our analysis we observed significant systematic and random errors in most methods, which was surprising especially for parameterized classical and semiempirical quantum mechanical calculations. After propagating these fragment-based error estimates over the entire protein-ligand complex, our total error estimates for many methods are large compared to the experimentally determined free energy of binding. Thus, we conclude that statistical error analysis is a necessary addition to any scoring function attempting to produce reliable binding affinity predictions. PMID:21666841

  10. Complexation of N4-Tetradentate Ligands with Nd(III) and Am(III)

    SciTech Connect

    Ogden, Mark D.; Sinkov, Sergey I.; Meier, G. Patrick; Lumetta, Gregg J.; Nash, Kenneth L.

    2012-12-06

    To improve understanding of aza-complexants in trivalent actinide–lanthanide separations, a series of tetradentate N-donor ligands have been synthesized and their complexation of americium(III) and neodymium(III) investigated by UV–visible spectrophotometry in methanolic solutions. The six pyridine/alkyl amine/imine ligands are N,N0-bis(2-methylpyridyl)-1,2-diaminoethane, N,N0-bis(2-methylpyridyl)-1,3-diaminopropane, trans-N,N-bis(2-pyridylmethyl)-1,2-diaminocyclohexane (BPMDAC), N,N’-bis(2-pyridylmethyl)piperazine, N,N’-bis-[pyridin-2-ylmethylene]ethane-1,2-diamine, and trans-N,Nbis-([pyridin-2-ylmethylene]-cyclohexane-1,2-diamine. Each ligand has two pyridine groups and two aliphatic amine/imine N-donor atoms arranged with different degrees of preorganization and structural backbone rigidity. Conditional stability constants for the complexes of Am(III) and Nd(III) by these ligands establish the selectivity patterns. The overall selectivity of Am(III) over Nd(III) is similar to that reported for the terdentate bis(dialkyltriazinyl)pyridine molecules. The cyclohexane amine derivative (BPMDAC) is the strongest complexant and shows the highest selectivity for Am(III) over Nd(III) while the imines appear to prefer a bridging arrangement between two cations. These results suggest that this series of ligands could be employed to develop an enhanced actinide(III)– lanthanide(III) separation system.

  11. CO2 Hydrogenation Catalyzed by Iridium Complexes with a Proton-Responsive Ligand.

    PubMed

    Onishi, Naoya; Xu, Shaoan; Manaka, Yuichi; Suna, Yuki; Wang, Wan-Hui; Muckerman, James T; Fujita, Etsuko; Himeda, Yuichiro

    2015-06-01

    The catalytic cycle for the production of formic acid by CO2 hydrogenation and the reverse reaction have received renewed attention because they are viewed as offering a viable scheme for hydrogen storage and release. In this Forum Article, CO2 hydrogenation catalyzed by iridium complexes bearing sophisticated N^N-bidentate ligands is reported. We describe how a ligand containing hydroxy groups as proton-responsive substituents enhances the catalytic performance by an electronic effect of the oxyanions and a pendent-base effect through secondary coordination sphere interactions. In particular, [(Cp*IrCl)2(TH2BPM)]Cl2 (Cp* = pentamethylcyclopentadienyl; TH2BPM = 4,4',6,6'-tetrahydroxy-2,2'-bipyrimidine) enormously promotes the catalytic hydrogenation of CO2 in basic water by these synergistic effects under atmospheric pressure and at room temperature. Additionally, newly designed complexes with azole-type ligands were applied to CO2 hydrogenation. The catalytic efficiencies of the azole-type complexes were much higher than that of the unsubstituted bipyridine complex [Cp*Ir(bpy)(OH2)]SO4. Furthermore, the introduction of one or more hydroxy groups into ligands such as 2-pyrazolyl-6-hydroxypyridine, 2-pyrazolyl-4,6-dihydroxypyrimidine, and 4-pyrazolyl-2,6-dihydroxypyrimidine enhanced the catalytic activity. It is clear that the incorporation of additional electron-donating functionalities into proton-responsive azole-type ligands is effective for promoting further enhanced hydrogenation of CO2.

  12. Synthesis, characterization and luminescent properties of lanthanide complexes with a novel multipodal ligand.

    PubMed

    Yan, Zhen-Zhong; Hou, Na; Wang, Cong-Min

    2015-02-25

    Solid complexes of lanthanide nitrates with an novel multipodal ligand, 1,2,4,5-tetramethyl-3,6-bis{N,N-bis[((2'-furfurylaminoformyl)phenoxyl)ethyl]-aminomethyl}-benzene (L) have been synthesized and characterized by elemental analysis, infrared spectra and molar conductivity measurements. At the same time, the luminescent properties of the Sm(III), Eu(III), Tb(III) and Dy(III) nitrate complexes in solid state were investigated. Under the excitation of UV light, these complexes exhibited characteristic emission of central metal ions. The lowest triplet state energy level of the ligand indicates that the triplet state energy level (T1) of the ligand matches better the resonance level of Tb(III) than other lanthanide ions.

  13. Binding site identification and structure determination of protein-ligand complexes by NMR

    PubMed Central

    Ziarek, Joshua J.; Peterson, Francis C.; Lytle, Betsy L.; Volkman, Brian F.

    2013-01-01

    Over the last fifteen years, the role of NMR spectroscopy in the lead identification and optimization stages of pharmaceutical drug discovery has steadily increased. NMR occupies a unique niche in the biophysical analysis of drug-like compounds because of its ability to identify binding sites, affinities, and ligand poses at the level of individual amino acids without necessarily solving the structure of the protein-ligand complex. However, it can also provide structures of flexible proteins and low-affinity (Kd > 10-6 M) complexes, which often fail to crystallize. This article emphasizes a throughput-focused protocol that aims to identify practical aspects of binding site characterization, automated and semi-automated NMR assignment methods, and structure determination of protein-ligand complexes by NMR. PMID:21371594

  14. Generating "fragment-based virtual library" using pocket similarity search of ligand-receptor complexes.

    PubMed

    Khashan, Raed S

    2015-01-01

    As the number of available ligand-receptor complexes is increasing, researchers are becoming more dedicated to mine these complexes to aid in the drug design and development process. We present free software which is developed as a tool for performing similarity search across ligand-receptor complexes for identifying binding pockets which are similar to that of a target receptor. The search is based on 3D-geometric and chemical similarity of the atoms forming the binding pocket. For each match identified, the ligand's fragment(s) corresponding to that binding pocket are extracted, thus forming a virtual library of fragments (FragVLib) that is useful for structure-based drug design. The program provides a very useful tool to explore available databases.

  15. Dynamics of ligand substitution in labile cobalt complexes resolved by ultrafast T-jump

    PubMed Central

    Ma, Hairong; Wan, Chaozhi; Zewail, Ahmed H.

    2008-01-01

    Ligand exchange of hydrated metal complexes is common in chemical and biological systems. Using the ultrafast T-jump, we examined this process, specifically the transformation of aqua cobalt (II) complexes to their fully halogenated species. The results reveal a stepwise mechanism with time scales varying from hundreds of picoseconds to nanoseconds. The dynamics are significantly faster when the structure is retained but becomes rate-limited when the octahedral-to-tetrahedral structural change bottlenecks the transformation. Evidence is presented, from bimolecular kinetics and energetics (enthalpic and entropic), for a reaction in which the ligand assists the displacement of water molecules, with the retention of the entering ligand in the activated state. The reaction time scale deviates by one to two orders of magnitude from that of ionic diffusion, suggesting the involvement of a collisional barrier between the ion and the much larger complex. PMID:18725628

  16. Titanium(IV) imido complexes of imine imidazol-2-imine ligands.

    PubMed

    Dastgir, Sarim; Lavoie, Gino G

    2012-08-28

    Free imine imidazol-2-imine ligands with two different substitution patterns have been isolated for the first time and they were found to exist as an equilibrium mixture of geometric and mesomeric isomers. The relative ratios of these isomers are dependent on both the nature of the substituents and of the solvent. The synthesis of the titanium(IV) alkyl and arylimido complexes of these ligands was unexpectedly found to be very selective and was successfully achieved only with the lesser sterically-demanding 2,4,6-trimethylphenyl derivative IMesN^Imine 2a. The solid-state structure of the alkylimido complex further confirms the zwitterionic character of the ligand. The isolated titanium imido complexes were found to be active catalysts for the polymerisation of ethylene.

  17. Rhenium complexes of bidentate, bis-bidentate and tridentate N-heterocyclic carbene ligands.

    PubMed

    Chan, Chung Ying; Barnard, Peter J

    2015-11-28

    A series of eight Rhenium(I)-N-heterocyclic carbene (NHC) complexes of the general form [ReCl(CO)3(C^C)] (where C^C is a bis(NHC) bidentate ligand), [ReCl(CO)3(C^C)]2 (where C^C is a bis-bidentate tetra-NHC ligand) and [Re(CO)3(C^N^C)](+)[X](-) (where C^N^C is a bis(NHC)-amine ligand and the counter ion X is either the ReO4(-) or PF6(-)) have been synthesised using a Ag2O transmetallation protocol. The novel precursor imidazolium salts and Re(I) complexes were characterized by elemental analysis, (1)H and (13)C NMR spectroscopy and the molecular structures for two imidazolium salt and six Re(I) complexes were determined by single crystal X-ray diffraction. These NHC ligand systems are of interest for possible applications in the development of Tc-99m or Re-186/188 radiopharmaceuticals and as such the stability of two complexes of the form [ReCl(CO)3(C^C)] and [Re(CO)3(C^N^C)][ReO4] were evaluated in ligand challenge experiments using the metal binding amino acids L-histidine or L-cysteine. These studies showed that the former was unstable, with the chloride ligand being replaced by either cysteine or histidine, while no evidence for transchelation was observed for the latter suggesting that bis(NHC)-amine ligands of this type may be suitable for biological applications.

  18. Polyimido sulfur(VI) phosphanyl ligand in metal complexation.

    PubMed

    Carl, Elena; Stalke, Dietmar

    2014-11-24

    Herein, new complexes containing the [Ph2PCH2S(NtBu)3](-) anion are presented, supplying three imido nitrogen atoms and a remote phosphorus atom as potential donor sites to main group and transition-metal cations. The lithiated complex [(tmeda)Li{(NtBu)3SCH2PPh2}] (1) is an excellent starting material in transmetalation reactions. Herein, the transition-metal complexes [M{(NtBu)3SCH2PPh2}2] (M=Mn (2), Ni (3), Zn (4)) were synthesized and structurally characterized. Their isotypical molecules show SN2 chelation and no employment of the adjacent phosphorus atom in coordination. The third pendent imido group is always twisted toward the vacant face of the tetrahedrally coordinated sulfur atom.

  19. Synthesis, Characterization and Biological Evaluation of Transition Metal Complexes Derived from N, S Bidentate Ligands

    PubMed Central

    Md Yusof, Enis Nadia; Ravoof, Thahira Begum S. A.; Tiekink, Edward R. T.; Veerakumarasivam, Abhimanyu; Crouse, Karen Anne; Mohamed Tahir, Mohamed Ibrahim; Ahmad, Haslina

    2015-01-01

    Two bidentate NS ligands were synthesized by the condensation reaction of S-2-methylbenzyldithiocarbazate (S2MBDTC) with 2-methoxybenzaldehyde (2MB) and 3-methoxybenzaldehyde (3MB). The ligands were reacted separately with acetates of Cu(II), Ni(II) and Zn(II) yielding 1:2 (metal:ligand) complexes. The metal complexes formed were expected to have a general formula of [M(NS)2] where M = Cu2+, Ni2+, and Zn2+. These compounds were characterized by elemental analysis, molar conductivity, magnetic susceptibility and various spectroscopic techniques. The magnetic susceptibility measurements and spectral results supported the predicted coordination geometry in which the Schiff bases behaved as bidentate NS donor ligands coordinating via the azomethine nitrogen and thiolate sulfur. The molecular structures of the isomeric S2M2MBH (1) and S2M3MBH (2) were established by X-ray crystallography to have very similar l-shaped structures. The Schiff bases and their metal complexes were evaluated for their biological activities against estrogen receptor-positive (MCF-7) and estrogen receptor-negative (MDA-MB-231) breast cancer cell lines. Only the Cu(II) complexes showed marked cytotoxicity against the cancer cell lines. Both Schiff bases and other metal complexes were found to be inactive. In concordance with the cytotoxicity studies, the DNA binding studies indicated that Cu(II) complexes have a strong DNA binding affinity. PMID:25988384

  20. Synthesis, characterization and DNA binding studies of platinum(II) complexes with benzimidazole derivative ligands.

    PubMed

    Tarı, Özden; Gümüş, Fatma; Açık, Leyla; Aydın, Betül

    2017-10-01

    The aim of this study was to synthesize and evaluate plasmid DNA interaction of new platinum(II) complexes with some 2-substituted benzimidazole derivatives as carrier ligands which may have potent anticancer activity and low toxicity. Twelve benzimidazole derivatives carrying indole, 2-/or 3-/or 4-methoxyphenyl, 4-methylphenyl, 3,4-dimethoxyphenyl, 3,4,5-trimethoxyphenyl, 4-methoxybenzyl, 3,4,5-trimethoxybenzyl, 3,4,5-trimethoxystyryl, 3,4,5-trimethoxybenzylthio or dimethylamino ethyl groups in their position 2 and twelve platinum(II) complexes with these carrier ligands were synthesized. The chemical structure of the platinum complexes have been characterized by their elemental analysis and FIR, (1)H NMR and mass spectra and their (1)H NMR and FIR spectra were interpreted by comparison with those of the ligands. The interaction of all the ligands and their complexes with plasmid DNA and their restriction endonuclease reactions by BamHI and HindIII enzymes were studied by agarose gel electrophoresis. It was determined that complex 1 [dichloro-di(2-(1H-indole-3-yl)benzimidazole)platinum(II)·2H2O] has stronger interaction than carboplatin and complex 10 [dichloro-di(2-(3,4,5-trimethoxystyryl)benzimidazole)platinum(II)·2H2O] has stronger interaction than both carboplatin and cisplatin with plasmid DNA. Copyright © 2017 Elsevier Inc. All rights reserved.

  1. Synthesis and resolution of planar-chiral ruthenium-palladium complexes with ECE' pincer ligands.

    PubMed

    Bonnet, Sylvestre; Li, Jie; Siegler, Maxime A; von Chrzanowski, Lars S; Spek, Anthony L; van Koten, Gerard; Klein Gebbink, Robertus J M

    2009-01-01

    Feel the pinch! Planar-chiral, cationic, ruthenium-palladium complexes based on eta(6),eta(1)-coordinated ECE' pincer ligands are synthesized as racemic mixtures by reacting ECE'-palladium complexes and [Ru(C(5)R(5))(MeCN)(3)](+) arenophiles (R=H or Me). Chiral resolution of the cationic complexes was achieved by using the chiral counterion [Delta-TRISPHAT](-), and solving the X-ray crystal structure of one diastereoisomer (shown here).

  2. Macrocyclic ligands for uranium complexation. Final report, August 1, 1986--March 31, 1993

    SciTech Connect

    Potts, K.T.

    1993-12-31

    Macrocycles, designed for complexation of the uranyl ion by computer modeling studies and utilizing six ligating atoms in the equatorial plane of the uranyl ions, have been prepared and their complexation of the uranyl ions evaluated. The ligating atoms, either oxygen or sulfur, were part of acylurea, biuret or thiobiuret subunits with alkane chains or pyridine units completing the macrocyclic periphery. These macrocycles with only partial preorganization formed uranyl complexes in solution but no crystalline complexes were isolated. Refinement of the cavity diameter by variation of the peripheral functional groups is currently studied to achieve an optimized cavity diameter of 4.7--5.2 {angstrom}. Acyclic ligands containing the same ligating atoms in equivalent functional entities were found to form a crystalline 1:1 uranyl-ligand complex (stability constant log K = 10.7) whose structure was established by X-ray data. This complex underwent a facile, DMSO-induced rearrangement to a 2:1 uranyl-ligand complex whose structure was also established by X-ray data. The intermediates to the macrocycles all behaved as excellent ligands for the complexation of transition metals. Acylthiourea complexes of copper and nickel as well as intermolecular, binuclear copper and nickel complexes of bidentate carbonyl thioureas formed readily and their structures were established in several representative instances by X-ray structural determinations. Tetradentate bis(carbonylthioureas) were found to be very efficient selective reagents for the complexation of copper in the presence of nickel ions. Several preorganized macrocycles were also prepared but in most instances these macrocycles underwent ring-opening under complexation conditions.

  3. Modelling of trace metal uptake by roots taking into account complexation by exogenous organic ligands

    NASA Astrophysics Data System (ADS)

    Jean-Marc, Custos; Christian, Moyne; Sterckeman, Thibault

    2010-05-01

    The context of this study is phytoextraction of soil trace metals such as Cd, Pb or Zn. Trace metal transfer from soil to plant depends on physical and chemical processes such as minerals alteration, transport, adsorption/desorption, reactions in solution and biological processes including the action of plant roots and of associated micro-flora. Complexation of metal ions by organic ligands is considered to play a role on the availability of trace metals for roots in particular in the event that synthetic ligands (EDTA, NTA, etc.) are added to the soil to increase the solubility of the contaminants. As this role is not clearly understood, we wanted to simulate it in order to quantify the effect of organic ligands on root uptake of trace metals and produce a tool which could help in optimizing the conditions of phytoextraction.We studied the effect of an aminocarboxilate ligand on the absorption of the metal ion by roots, both in hydroponic solution and in soil solution, for which we had to formalize the buffer power for the metal. We assumed that the hydrated metal ion is the only form which can be absorbed by the plants. Transport and reaction processes were modelled for a system made up of the metal M, a ligand L and the metal complex ML. The Tinker-Nye-Barber model was adapted to describe the transport of solutes M, L and ML in the soil and absorption of M by the roots. This allowed to represent the interactions between transport, chelating reactions, absorption of the solutes at the root surface, root growth with time, in order to simulate metal uptake by a whole root system.Several assumptions were tested such as i) absorption of the metal by an infinite sink and according to a Michaelis-Menten kinetics, solutes transport by diffusion with and without ii) mass flow and iii) soil buffer power for the ligand L. In hydroponic solution (without soil buffer power), ligands decreased the trace metal flux towards roots, as they reduced the concentration of hydrated

  4. Voltage clustering in redox-active ligand complexes: mitigating electronic communication through choice of metal ion

    DOE PAGES

    Zarkesh, Ryan A.; Ichimura, Andrew S.; Monson, Todd C.; ...

    2016-02-01

    We used the redox-active bis(imino)acenapthene (BIAN) ligand to synthesize homoleptic aluminum, chromium, and gallium complexes of the general formula (BIAN)3M. The resulting compounds were characterized using X-ray crystallography, NMR, EPR, magnetic susceptibility and cyclic voltammetry measurements and modeled using both DFT and ab initio wavefunction calculations to compare the orbital contributions of main group elements and transition metals in ligand-based redox events. Ultimately, complexes of this type have the potential to improve the energy density and electrolyte stability of grid-scale energy storage technologies, such as redox flow batteries, through thermodynamically-clustered redox events.

  5. Voltage clustering in redox-active ligand complexes: mitigating electronic communication through choice of metal ion

    SciTech Connect

    Zarkesh, Ryan A.; Ichimura, Andrew S.; Monson, Todd C.; Tomson, Neil C.; Anstey, Mitchell R.

    2016-02-01

    We used the redox-active bis(imino)acenapthene (BIAN) ligand to synthesize homoleptic aluminum, chromium, and gallium complexes of the general formula (BIAN)3M. The resulting compounds were characterized using X-ray crystallography, NMR, EPR, magnetic susceptibility and cyclic voltammetry measurements and modeled using both DFT and ab initio wavefunction calculations to compare the orbital contributions of main group elements and transition metals in ligand-based redox events. Ultimately, complexes of this type have the potential to improve the energy density and electrolyte stability of grid-scale energy storage technologies, such as redox flow batteries, through thermodynamically-clustered redox events.

  6. Synthesis, structure, and photophysical characterization of blue-green luminescent zinc complexes containing 2-iminophenanthropyrrolyl ligands.

    PubMed

    Gomes, Clara S B; Gomes, Pedro T; Duarte, M Teresa; Di Paolo, Roberto E; Maçanita, António L; Calhorda, Maria José

    2009-12-07

    New 2-iminophenanthro[9,10-c]pyrrole ligand precursors containing phenyl or 2,6-diisopropylphenyl groups at the imine nitrogen substituent, 2-arylformiminophenanthro[9,10-c]pyrroles (aryl = phenyl IIa, 2,6-diisopropylphenyl IIb) were synthesized and deprotonated in situ with NaH, originating solutions of the corresponding sodium salts (IVa, IVb). The reaction of these salts with zinc chloride gave the homoleptic bis-ligand Zn(II) complexes [Zn(kappa(2)N,N'-2-arylformiminophenanthro[9,10-c]pyrrolyl)(2)] (aryl = phenyl 2a, 2,6-diisopropylphenyl 2b). The new ligand precursors and complexes were characterized by NMR, elemental analysis, UV/vis spectroscopy, and X-ray crystallography, when possible. The photophysical characterization was carried out using steady-state and picosecond time-resolved luminescence techniques in solution. The influence of the pi-extended conjugation of the condensed phenanthro group on the deprotonated iminopyrrolyl ligands coordinated to Zn(2+) greatly enhances fluorescence quantum yields of the complexes (2a, 2b) in relation to those of their ligand precursors (IIa, IIb). Complex 2a shows emission in the green spectral region (lambda(max) = 494 nm), presenting the highest fluorescence quantum yield (phi(f) = 8.8%). In the case of the complex 2b (phi(f) = 3.9%), the bulkiness of the 2,6-diisopropyl substituents of the arylimino group highly restricts the aryl ring rotation toward coplanarity with the ligand framework, inducing a shift in the emission to the blue region (lambda(max) = 459 nm). The values of the radiative (k(f)) and radiationless rate constants (k(nr)) show that the fluorescence quantum yield enhancement in the complexes results from a 50-fold increase in k(f) values, indicating much more allowed pi-pi* transitions in complexes 2a and 2b than those occurring in the ligand precursors IIa and IIb, with an essentially n-pi* character. These assignments were confirmed by density-functional theory (DFT) and time-dependent DFT (TD

  7. Pyridazine- versus pyridine-based tridentate ligands in first-row transition metal complexes.

    PubMed

    Grünwald, Katrin R; Volpe, Manuel; Cias, Pawel; Gescheidt, Georg; Mösch-Zanetti, Nadia C

    2011-08-15

    A series of first-row transition metal complexes with the unsymmetrically disubstituted pyridazine ligand picolinaldehyde (6-chloro-3-pyridazinyl)hydrazone (PIPYH), featuring an easily abstractable proton in the backbone, was prepared. Ligand design was inspired by literature-known picolinaldehyde 2-pyridylhydrazone (PAPYH). Reaction of PIPYH with divalent nickel, copper, and zinc nitrates in ethanol led to complexes of the type [Cu(II)(PIPYH)(NO(3))(2)] (1) or [M(PIPYH)(2)](NO(3))(2) [M = Ni(II) (2) or Zn(II) (3)]. Complex synthesis in the presence of triethylamine yielded fully- or semideprotonated complexes [Cu(II)(PIPY)(NO(3))] (4), [Ni(II)(PIPYH)(PIPY)](NO(3)) (5), and [Zn(II)(PIPY)(2)] (6), respectively. Cobalt(II) nitrate is quantitatively oxidized under the reaction conditions to [Co(III)(PIPY)(2)](NO(3)) (7) in both neutral and basic media. X-ray diffraction analyses reveal a penta- (1) or hexa-coordinated (2, 3, and 7) metal center surrounded by one or two tridentate ligands and, eventually, κ-O,O' nitrate ions. The solid-state stoichiometry was confirmed by electron impact (EI) and electrospray ionization (ESI) mass spectrometry. The diamagnetic complexes 5 and 6 were subjected to (1)H NMR spectroscopy, suggesting that the ligand to metal ratio remains constant in solution. Electronic properties were analyzed by means of cyclic voltammetry and, in case of copper complexes 1 and 4, also by electron paramagnetic resonance (EPR) spectroscopy, showing increased symmetry upon deprotonation for the latter, which is in accordance with the proposed stoichiometry [Cu(II)(PIPY)(NO(3))]. Protic behavior of the nickel complexes 2 and 5 was investigated by UV/vis spectroscopy, revealing high π-backbonding ability of the PIPYH ligand resulting in an unexpected low acidity of the hydrazone proton in nickel complex 2.

  8. Phosphorescent iridium(III) complexes: toward high phosphorescence quantum efficiency through ligand control.

    PubMed

    You, Youngmin; Park, Soo Young

    2009-02-28

    Phosphorescent Ir(III) complexes attract enormous attention because they allow highly efficient electrophosphorescence. In pursuing the development of Ir(III) complexes during the last decade, significant progress has been made in terms of the colour-tunability, thermal- and photo-stability, phase homogeneity, and phosphorescence efficiency. By far, extensive synthetic efforts have been focused on the molecular design of ligands to achieve a wide range of phosphorescence colour that is compatible with organic light-emitting device (OLED) applications. In contrast, less has been known about a collective structure-property relationship for phosphorescence quantum efficiency. In fact, a few rule-of-thumbs for high phosphorescence quantum efficiency have been occasionally reported, but a collective rationale is yet to be investigated. In this article, we provide a comprehensive review of 8 different methods reported so far to achieve high phosphorescence quantum efficiency from Ir(III) complexes. The methods included herein are limited to the cases of intramolecular controls, and thus are discussed in terms of variations in ligand structures: (1) geometric isomer control, (2) rigid structure and restricted intramolecular motion, (3) larger mixing of 1MLCT and 3LC states, (4) de-stabilizing a thermally accessible non-emissive state, (5) introducing dendrimer structures, (6) control in substituents of ligands, (7) confining the phosphorescent region of a mixed ligand Ir(III) complex and (8) sensitized phosphorescence by using attached energy donors. Each method is closely related to intramolecular excited state interactions, which strongly affect radiative or non-radiative transitions. A comprehensive understanding of these methods leads us to conclude that the modulation in ligand structures has a profound effect on both the phosphorescence colour and phosphorescence quantum efficiency. Thus, the judicious selection of ligand structures and their chelate disposition

  9. Rare Earth Metal Complexes of Bidentate Nitroxide Ligands: Synthesis and Electrochemistry.

    PubMed

    Kim, Jee Eon; Bogart, Justin A; Carroll, Patrick J; Schelter, Eric J

    2016-01-19

    We report rare earth metal complexes with tri- and bidentate ligands including strongly electron-donating nitroxide groups. The tridentate ligand 1,3,5-tris(2'-tert-butylhydroxylaminoaryl)benzene (H3arene-triNOx) was complexed to cerium(IV) in a 2:1 ligand-to-metal stoichiometry as Ce(Harene-triNOx)2 (1). Cyclic voltammetry of this compound showed stabilization of the tetravalent cerium cation with a Ce(IV/III) couple at E1/2 = -1.82 V versus Fc/Fc(+). On the basis of the uninvolvement of the third nitroxide group in the coordination chemistry with the cerium(IV) cation, the ligand system was redesigned toward a simpler bidentate mode, and a series of rare earth metal-arene-diNOx complexes were prepared with La(III), Ce(IV), Pr(III), Tb(III), and Y(III), [RE(arene-diNOx)2](-) ([2-RE](-), RE = La, Pr, Y, Tb) and Ce(IV)(arene-diNOx)2, where H2arene-diNOx = 1,3-bis(2'-tert-butylhydroxylaminoaryl)benzene. The core structures were isostructural throughout the series, with three nitroxide groups in η(2) binding modes and one κ(1) nitroxide group coordinated to the metal center in the solid state. In all cases except Ce(IV)(arene-diNOx)2, electrochemical analysis described two subsequent, ligand-based, quasi-reversible redox waves, indicating that a stable [N-O•] group was generated on the electrochemical time scale. Chemical oxidation of the terbium complex was performed, and isolation of the resulting complex, Tb(arene-diNOx)2·CH2Cl2 (3·CH2Cl2), confirmed the assignment of the cyclic voltammograms. Magnetic data showed no evidence of mixing between the Tb(III) states and the states of the open-shell ligand.

  10. Salt-marsh areas as copper complexing ligand sources to estuarine and coastal systems.

    PubMed

    Santos-Echeandía, Juan; Caetano, Miguel; Laglera, Luis M; Vale, Carlos

    2013-01-01

    Dissolved copper levels, copper complexing capacities and conditional stability constants have been determined in the Tagus estuarine waters and one of the saltmarshes located in this estuary, the Rosario saltmarsh. Tagus estuarine waters show a constant and around 20 nM copper concentration during the estuarine mixing. Most of this copper is organically complexed by a strong ligand (L(1)) with a concentration that varies between 19 and 55 nM and a log K' between 14.14 and 15.75. In addition L(1)/Cu ratios are quite constants and close to 1 all through the estuary, indicating the same source. A second and weaker ligand (L(2)) was also detected in these waters in higher concentrations (36-368 nM) but with a lower log K' that varies between 12.06 and 13.13. The present work has demonstrated that salt-marsh areas are important and continuous sources of copper complexing ligands to the Tagus estuary. Noticeable, tidal induced transport continuously feed these waters with copper and ligands, mainly with the stronger one. This continuous input, together with the high residence times of this system results in a quite constant concentration along the salinity gradient. This input represents 95% of the ligand present in the estuary. Copyright © 2012 Elsevier Ltd. All rights reserved.

  11. Palladium complexes of 6-aminofulvene-2-aldiminate (AFA) ligands.

    PubMed

    Bailey, Philip J; Collins, Anna; Haack, Peter; Parsons, Simon; Rahman, Mahmudur; Smith, Damian; White, Fraser J

    2010-02-14

    Bis(N,N'-2,6-diisopropylphenyl)-6-aminofulvene-2-aldimine (4) has been synthesised and characterised. The synthesis and characterisation of two zwitterionic Pd(ii) complexes [(Ph(2)AFA)Pd(Me)DMAP] (1) and [(Ph(2)AFA)Pd(N,N-dimethylbenzylamine-2-C,N)] (2) are reported. Activation of 1 and 2 for ethene polymerisation with Lewis acids such as BF(3) and B(C(6)F(5))(3) were not successful. Attempted synthesis of halide-bridged dimers of the form [(Ph(2)AFA)Pd(mu-X)](2) resulted in formation of bis-chelated complexes [(Cy(2)AFA)(2)Pd] (3) and [((t)Bu(2)AFA)(2)Pd] (5).

  12. Ligand Exchange Reaction of Au(I) R-N-Heterocyclic Carbene Complexes with Cysteine.

    PubMed

    Dos Santos, H F; Vieira, M A; Sánchez Delgado, G Y; Paschoal, D

    2016-04-14

    The chemotherapy with gold complexes has been attempted since the 90s after the clinical success of auranofin, a gold(I) coordination complex. Currently, the organometallics compounds have shown promise in cancer therapy, mainly in those complexes containing N-heterocylic carbenes (NHC) as a ligand. The present study shows a kinetic analysis of the reaction of six alkyl-substituted NHC with cysteine (Cys), which is taken as an important bionucleophile representative. The first and second ligand exchange processes were analyzed with the complete description of the mechanism and energy profiles. For the first reaction step, which is the rate-limiting step of the whole substitution reaction, the activation enthalpy follows the order 1/Me2 < 2/Me,Et < 4/n-Bu2 < 3/i-Pr2 < 6/Cy2 < 5/t-Bu2, which is fully explained by steric and electronic features. From a steric point of view, the previous reactivity order is correlated with the r(Au-S) calculated for the transition state structures where S is the sulfur ligand from the Cys entering group. This means that longer r(Au-S) leads to higher activation enthalpy and is consistent with the effectiveness of gold shielding from nucleophile attack by bulkier alkyl-substituted NHC ligand. When electronic effect was addressed we found that higher activation barrier was predicted for strongly electron-donating NHC ligand, represented by the eigenvalue of σ-HOMO orbital of the free ligands. The molecular interpretation of the electronic effects is that strong donating NHC forms strong metal-ligand bond. For the second reaction step, similar structure-reactivity relationships were obtained, however the activation energies are less sensitive to the structure.

  13. Synthesis of new microbial pesticide metal complexes derived from coumarin-imine ligand

    NASA Astrophysics Data System (ADS)

    Elhusseiny, Amel F.; Aazam, Elham S.; Al-Amri, Huda M.

    2014-07-01

    A series of metal complexes of zinc(II), cadmium(II), copper(II), nickel(II) and palladium(II) have been synthesized from coumarin-imine ligand, 8-[(1E)-1-(2-aminophenyliminio)ethyl]-2-oxo-2H-chromen-7-olate, [HL]. The structures of the complexes were proposed in the light of their spectroscopic, molar conductance, magnetic and thermal studies. The ligand coordinated in a tridentate manner through the azomethine nitrogen, the phenolic oxygen and the amine nitrogen and all complexes were non-electrolytes with different geometrical arrangements around the central metal ion. Photoluminescence data unambiguously showed remarkable fluorescence enhancement to Zn2+ over other cations. The antimicrobial screening tests revealed that copper(II) complex exhibited the highest potency and its minimum inhibitory concentration on the enzymatic activities of the tested microbial species was determined. No toxin productivity was detected for all tested toxigenic species upon the exposure of copper complex.

  14. Exploring the Hydrolytic Behavior of the Platinum(IV) Complexes with Axial Acetato Ligands.

    PubMed

    Zhao, Jian; Xu, Zichen; Lin, Jing; Gou, Shaohua

    2017-08-21

    Platinum(IV) complexes are generally thought to be kinetically inert, and are expected to be stable enough to resist premature aquation before entering the cancer cells. Nevertheless, in this work, complex 2 with axial acetato ligands can hydrolyze relatively quickly under biologically relevant conditions with a half-life of 91.7 min, resulting in the loss of the equatorial chlorido ligand. Further study indicated that the fast hydrolysis of complex 2 may be attributed to the strong σ-donor ability of N-isopropyl-1R,2R-diaminocyclohexane, and an increasing σ-donor ability of the amine group can promote the hydrolysis rate of the corresponding platinum(IV) complex. The experiment results were proven by the corresponding DFT calculation. Our study can help to re-evaluate the aqueous properties of the platinum(IV) complexes with axial acetate, which may be less inert to hydrolysis than expected under biologically relevant conditions.

  15. The measurement of organically complexed FeII in natural waters using competitive ligand reverse titration.

    PubMed

    Statham, Peter J; Jacobson, Yitzhak; van den Berg, C M G

    2012-09-19

    Whilst there is increasing evidence for the presence of stabilized Fe(II) associated with organic matter in aquatic environments, the absence of a reliable method for determining Fe(II) speciation in solution has inhibited the study of this aspect of Fe biogeochemistry. A technique is described here for the determination of Fe(II) organic complexation in natural waters that is based on competitive ligand reverse titration and a model fit to experimental results, from which ligand concentration and a conditional stability constant can be obtained. Spectrophotometry was used to detect the Ferrozine (FZ) complex with reactive Fe(II), which in combination with a liquid waveguide capillary cell (LWCC) enabled high sensitivity and precision measurements of Fe(II) to be made. A series of samples was collected in the Itchen River in Southampton, UK to test the method at a wide range of salinities including river water. Levels of Fe(II) and total dissolved Fe were within previously reported values for this system. Fe(II) was found to occur organically complexed with values for K'(Fe(II)L) (conditional stability constant for Fe(II)-natural ligand complexes) of ≈8 at salinities between 0 and 21, whilst no measurable complexation was detected at a salinity of 31. This work demonstrates that spectrophotometry can be used in combination with ligand competition to investigate metal speciation in natural waters. Copyright © 2012 Elsevier B.V. All rights reserved.

  16. Redox, thermodynamic and spectroscopic of some transition metal complexes containing heterocyclic Schiff base ligands

    NASA Astrophysics Data System (ADS)

    Abu-Hussen, Azza A. A.; Linert, Wolfgang

    2009-09-01

    Complexes of two series of Schiff base ligands, H 2L a and H 2L b derived from the reaction of 2,6-diacetyl pyridine with semicarbazide, H 2L a and thiosemicarbazide, H 2L b, with the metal ions, Co(II), Ni(II), Cu(II), VO(IV) and UO 2(VI) have been prepared. The ligands are characterized by elemental analysis, IR, UV-vis and 1H NMR. The structures of the complexes are investigated with the IR, UV-vis, X-band ESR spectra, 1H NMR and thermal gravimetric analysis as well as conductivity and magnetic moment measurements. The IR-spectra reveal the presence of variable modes of chelation for the investigated ligands. A variety of binuclear or mononuclear complexes were obtained with the two ligands in tri-, tetra or pentadentate forms. The bonding sites are the pyridine nitrogen, two azomethine nitrogen atoms and ketonic oxygen in case of H 2L a or sulphur atoms in case of H 2L b. The Coats-Redfern equation has been used to calculate the kinetic and thermodynamic parameters for the different thermal decomposition steps of some complexes. Cyclic voltammograms of Co(II) and Ni(II) show quasi-reversible peaks. The redox properties and the nature of the electro-active species of the complexes have been characterized.

  17. Redox, thermodynamic and spectroscopic of some transition metal complexes containing heterocyclic Schiff base ligands.

    PubMed

    Abu-Hussen, Azza A A; Linert, Wolfgang

    2009-09-15

    Complexes of two series of Schiff base ligands, H(2)L(a) and H(2)L(b) derived from the reaction of 2,6-diacetyl pyridine with semicarbazide, H(2)L(a) and thiosemicarbazide, H(2)L(b), with the metal ions, Co(II), Ni(II), Cu(II), VO(IV) and UO(2)(VI) have been prepared. The ligands are characterized by elemental analysis, IR, UV-vis and (1)H NMR. The structures of the complexes are investigated with the IR, UV-vis, X-band ESR spectra, (1)H NMR and thermal gravimetric analysis as well as conductivity and magnetic moment measurements. The IR-spectra reveal the presence of variable modes of chelation for the investigated ligands. A variety of binuclear or mononuclear complexes were obtained with the two ligands in tri-, tetra or pentadentate forms. The bonding sites are the pyridine nitrogen, two azomethine nitrogen atoms and ketonic oxygen in case of H(2)L(a) or sulphur atoms in case of H(2)L(b). The Coats-Redfern equation has been used to calculate the kinetic and thermodynamic parameters for the different thermal decomposition steps of some complexes. Cyclic voltammograms of Co(II) and Ni(II) show quasi-reversible peaks. The redox properties and the nature of the electro-active species of the complexes have been characterized.

  18. Syntheses, characterization, biological activities and photophysical properties of lanthanides complexes with a tetradentate Schiff base ligand

    NASA Astrophysics Data System (ADS)

    Taha, Ziyad A.; Ajlouni, Abdulaziz M.; Al Momani, Waleed; Al-Ghzawi, Abeer A.

    2011-10-01

    A tetradentate Schiff base ligand L (N,N'-bis(1-naphthaldimine)-o-phenylenediamine) was prepared from the condensation of 2-hydroxy-1-naphthaldehyde with o-phenylenediamine in a molar ratio of 2:1. New eight lanthanide metal complexes [Ln L(NO 3) 2(H 2O) x](NO 3) {Ln(III) = Nd, Dy, Sm, Pr, Gd, Tb, La and Er, x = 0 for Nd, Sm, 1 for La, Gd, Pr, Nd, Dy, and 2 for Tb} were prepared. The characterization and nature of bonding of these complexes were elucidated by elemental analysis, spectral analysis ( 1H NMR, FT-IR, UV-vis), molar conductivity measurements, luminescence spectra and thermogravimetric studies. Analytical and spectral data revealed that the ligand L coordinates to the central Ln(III) ions by its two imine nitrogen atoms and two phenolic oxygen atoms with 1:1 stoichiometry. Under the excitation with 329 nm at room temperature, Tb and Dy complexes exhibited characteristic luminescence of the central metal ions attributed to efficient energy transfer from the ligand to the metal center. Most of Ln(III) complexes found to exhibit antibacterial activities against a number of pathogenic bacteria. We found that the antioxident activity of Ln(III) complexes on DPPH rad is concentration dependent and higher than that of the free ligand L.

  19. Metal coordination geometry of ternary complex between cobalt-bovine carbonic anhydrase and multidentate ligands.

    PubMed

    Hirose, J; Kidani, Y

    1980-03-26

    Interaction of cobalt(II) bovine carbonic anhydrase with 3- and 4-pyridinecarboxylates, 2-pyridinecarboxylate, and 2,6-pyridinedicarboxylate has been investigated by the spectrophotometric method. The apparent formation constant of the ternary complex (ligand : cobalt ion : apoenzyme = 1 : 1 : 1) was determined from spectral data. The spectroscopic data of the ternary complex indicate that the 3- or 4-pyridinecarboxylate adduct has a five-coordination geometry through three donor atoms of the protein part of the enzyme, the carboxyl group of 3- or 4-pyridinecarboxylate, and a water molecule. 3- or 4-Pyridinecarboxylate behaves as a monodentate ligand. The spectrum of the ternary complex of 2-pyridinecarboxylate was very different from that of 3- or 4-pyridinecarboxylate. The spectra data indicate that 2-pyridinecarboxylate adduct has a five-coordination geometry and that it behaves as a bidentate ligand. The ternary complex of 2,6-pyridinedicarboxylate was so unstable that the spectrum of the ternary complex was determined by the indirect method. The spectrum of 2,6-pyridinedicarboxylate adduct shows lower molar absorption than that of 2-pyridinecarboxylate adduct. This result indicates that 2,6-pyridine dicarboxylate behaves possibly as a tridentate ligand.

  20. Uranyl complexes of alkyl-bridged ditopic diaminotetraphenol ligands and their use as uranyl ion extractors.

    PubMed

    Riisiö, Antti; Väisänen, Ari; Sillanpää, Reijo

    2013-08-05

    The coordination chemistry of uranyl ions was studied using long n-alkyl chain (n = 5-8) bridged by N,N,N',N'-tetrakis(2-hydroxy-3-methyl-5-tert-butylbenzyl)diaminoalkanes (H4L1-H4L4) as ligands. All ligands formed 2:1 (U-to-L ratio) complexes with uranyl ions, but in addition 1:1 complexes could be characterized using ligands H4L2 and H4L3. The complexes were characterized by elemental analysis, spectroscopy (IR and NMR), and X-ray diffraction. The 2:1 complexes are of two types: [(UO2)2(H2Lm)(NO3)2(solvent)2] (m = 1 and 2; solvent = ethanol or propanol) or (cation)2[(UO2)2(H2Lm)(NO3)2(anion)2]·xsolvent (m = 2 and 4; cation = triethylammonium, anion = nitrate or thiocyanate, and solvent = dichloromethane and acetonitrile; x = 1 or 2). The 1:1 complexes have the formula [(UO2)2(H2Lm)2] (m = 2 and 3). In the solid state, 2:1 complexes are almost in a linear conformation with the uranyl ion at both ends of the ligand. The 1:1 complexes are cyclic dinuclear molecules. Preliminary studies of the ligands as uranyl ion extractors from water to dichloromethane were also performed. A high extraction efficiency was observed with H4L3 for uranyl ions, and in the presence of Cu(II), Ni(II), Co(II), and Zn(II) ions, a good extraction selectivity for uranyl ions was found with H4L1.

  1. Estimating the acidity of transition metal hydride and dihydrogen complexes by adding ligand acidity constants.

    PubMed

    Morris, Robert H

    2014-02-05

    A simple equation (pKa(THF) = ∑AL + Ccharge + Cnd + Cd6) can be used to obtain an estimate of the pKa of diamagnetic transition metal hydride and dihydrogen complexes in tetrahydrofuran, and, by use of conversion equations, in other solvents. It involves adding acidity constants AL for each of the ligands in the 5-, 6-, 7-, or 8-coordinate conjugate base complex of the hydride or dihydrogen complex along with a correction for the charge (Ccharge = -15, 0 or 30 for x = +1, 0 or -1 charge, respectively) and the periodic row of the transition metal (Cnd = 0 for 3d or 4d metal, 2 for 5d metal) as well as a correction for d(6) octahedral acids (Cd6 = 6 for d(6) metal ion in the acid, 0 for others) that are not dihydrogen complexes. Constants AL are provided for 13 commonly occurring ligand types; of these, nine neutral ligands are correlated with Lever's electrochemical ligand parameters EL. This method gives good estimates of the over 170 literature pKa values that range from less than zero to 50 with a standard deviation of 3 pKa units for complexes of the metals chromium to nickel, molybdenum, ruthenium to palladium, and tungsten to platinum in the periodic table. This approach allows a quick assessment of the acidity of hydride complexes found in nature (e.g., hydrogenases) and in industry (e.g., catalysis and hydrogen energy applications). The pKa values calculated for acids that have bulky or large bite angle chelating ligands deviate the most from this correlation. The method also provides an estimate of the base strength of the deprotonated form of the complex.

  2. Bioavailability and Electroreactivity of Zinc Complexed to Strong and Weak Organic Ligands.

    PubMed

    Kim, Ja-Myung; Baars, Oliver; Morel, François M M

    2015-09-15

    Laboratory experiments have established the importance of complexation by organic ligands in determining the bioavailability of trace metals to marine phytoplankton, while electrochemical measurements with field samples have demonstrated that a large fraction of bioactive trace metals are complexed to strong organic ligands in seawater. Using the model organic ligands, EDTA and histidine, we show a quantitative correspondence between the bioavailability of Zn to the diatom Thalassiosira weissflogii, and its reduction at -1.2 V (vs Ag/AgCl) on a hanging mercury drop electrode. Equilibrium calculations and polarographic data indicate that Zn bound in inorganic complexes and the 1:1 Zn-histidine complex, but not in the 1:2 Zn-histidine complex or the Zn-EDTA complexes, is taken up by the organism and reduced at the electrode surface, confirming a previous report of the bioavailability of weak Zn complexes. Electrochemical measurements of Zn speciation in seawater do not generally reveal the presence of weak (and potentially bioavailable) complexes; but such measurements (particularly by Anodic Stripping Voltammetry) should nonetheless often provide good estimates of the bioavailable Zn concentrations. These results can likely be generalized to other bioactive divalent trace metals.

  3. Syntheses, crystal structures, anticancer activities of three reduce Schiff base ligand based transition metal complexes

    NASA Astrophysics Data System (ADS)

    Chang, Hui-Qin; Jia, Lei; Xu, Jun; Zhu, Tao-Feng; Xu, Zhou-Qing; Chen, Ru-Hua; Ma, Tie-Liang; Wang, Yuan; Wu, Wei-Na

    2016-02-01

    Three nickel(II) complexes, [Ni2(L1)2(tren)2(H2O)](ClO4)3 (1), [NiL2(tren)2](ClO4)·2.5H2O (2), [NiL2(tren)2]I·1.5H2O·CH3OH (3) based on amino acid reduced Schiff ligands are synthesized and characterized by physico-chemical and spectroscopic methods. The results show that in all complexes, the amino acid ligand is deprotonated and acts as an anionic ligand. In the dinuclear complex 1, each Ni(II) atom has a distorted octahedron geometry while with different coordination environment. However, the complexes 2 and 3 are mononuclear, almost with the same coordination environment. Furthermore, in vitro experiments are carried out, including MTT assay, Annexin V/PI flow cytometry and western blotting, to assess whether the complexes have antitumor effect. And the results show that all the three complexes have moderate anticancer activity towards human hepatic cancer (HepG2), human cervical cancer (HeLa) and human prostate (PC3) cell lines, in a concentration dependent way. The complex 1 exhibit higher cytotoxicity than the other two complexes and can induce human hepatic cancer cell (HepG2) to cell apoptosis by activating caspase 3.

  4. Zinc (II) complex with a cationic Schiff base ligand: Synthesis, characterization, and biological studies

    NASA Astrophysics Data System (ADS)

    Lee, Sze Koon; Tan, Kong Wai; Ng, Seik Weng; Ooi, Kah Kooi; Ang, Kok Pian; Abdah, Md Akim

    2014-03-01

    A cationic Schiff base ligand, TSB (L) and its Zn (II) complex (1) were synthesized and characterized by using CHN, 1H-NMR, FT-IR, UV, LC-MS, and X-ray methods. Their ability to inhibit topoisomerase I, DNA cleavage activities, and cytotoxicity were studied. X-ray diffraction study shows that the mononuclear complex 1 is four coordinated with distorted tetrahedral geometry. The singly deprotonated Schiff base ligand L acts as a bidentate ON-donor ligand. Complexation of L increases the inhibitory strength on topoisomerase I activity. Complex 1 could fully inhibit topoisomerase I activity at 250 μM, while L did not show any inhibitory effect on topoisomerase I activity. In addition, L and complex 1 could cleave pBR322 DNA in a concentration and time dependent profile. Surprisingly, L has better DNA cleavage activity than complex 1. The cleavage of DNA by complex 1 is altered in the presence of hydrogen peroxide. Furthermore, L and complex 1 are mildly cytotoxic towards human ovarian cancer A2780 and hepatocellular carcinoma HepG2.

  5. Effect of template ion-ligand complex stoichiometry on selectivity of ion-imprinted polymers.

    PubMed

    Laatikainen, Katri; Udomsap, Dutduan; Siren, Heli; Brisset, Hugues; Sainio, Tuomo; Branger, Catherine

    2015-03-01

    In order to highlight the importance of the complex stoichiometry during ion imprinted polymer (IIP) synthesis, we investigated the effect of the complex structure on IIPs selectivity by adjusting the complex stoichiometry before polymerization. 2-(aminomethyl)pyridine monomer (amp) was chosen as a functionalized ligand for nickel(II) ions and a polymerizable vinylbenzyl derivative (Vbamp) was prepared. Complex formation was studied by varying the nickel/Vbamp ratio and recording absorption spectra of the complexes at the polymerization conditions. Using a least-squares minimization scheme, the complex species distribution was successfully established. From these results, it was possible to choose the metal/ligand stoichiometry in the complex (1:1; 1:2 or 1:3) by adjusting the initial metal/ligand ratio. IIPs were then prepared by inverse suspension copolymerization of Vbamp with ethyleneglycol dimethacrylate (EDMA). Highly porous particles with good nickel binding capacity and good Ni/Zn selectivity even at acidic conditions were obtained. Equilibrium uptake of Ni(II) at pH 7 ranged from 0.12 to 0.2 mmol g(-1) and relative selective coefficient was as high as 260 for the IIP prepared using the Ni(Vbamp)2 complex. Copyright © 2014 Elsevier B.V. All rights reserved.

  6. Synthesis and infrared and fluorescent spectra of rare earth complexes with a new amide ligand.

    PubMed

    Cui, Haixia; Chen, Jianmin; Zhou, Huidi; Lu, Yanhua

    2007-11-01

    Solid complexes of rare earth nitrates and picrates with a new amide ligand, 1,6-bis[(2'-benzylaminoformyl)phenoxyl]hexane (L) have been prepared. These complexes are characterized by elemental analysis, UV-vis spectra and IR spectra. The fluorescent and luminescent properties of the Eu(III) and Tb(III) nitrates and picrates complexes in solid state are also investigated. Under the excitation of UV light, these complexes except Tb(III) picrate complex exhibit characteristic emission of europium and terbium ions. The influence of the counter anion on the fluorescent intensity is also discussed.

  7. Gas Phase Computational Studies on the Competition Between Nitrile and Water Ligands in Uranyl Complexes

    SciTech Connect

    Schoendorff, George E.; De Jong, Wibe A.; Gordon, Mark S.; Windus, Theresa L.

    2010-08-26

    The formation of uranyl dicationic complexes containing water and nitrile (acetonitrile, propionitrile, and benzonitrile) ligands, [UO2(H2O)n(RCN)m]2+, has been studied using density functional theory (DFT) with a relativistic effective core potential (RECP) to account for scalar relativistic effects on uranium. It is shown that nitrile addition is favored over the addition of water ligands. Decomposition of these complexes to [UO2OH(H2O)n(RCN)m]+ by the loss of either H3O+ or (RCN+H)+ is also examined. It is found that this reaction occurs when the coordination sphere of uranyl is unsaturated. Additionally, this reaction is influenced by the size of the nitrile ligand with reactions involving acetonitrile being the most prevalent.

  8. Cleaved thioredoxin fusion protein enables the crystallization of poorly soluble ERα in complex with synthetic ligands

    SciTech Connect

    Cura, Vincent; Gangloff, Monique; Eiler, Sylvia; Moras, Dino; Ruff, Marc

    2008-01-01

    A new crystallization strategy: the presence of cleaved thioredoxin fusion is critical for crystallization of the estrogen nuclear receptor ligand binding domain in complex with synthetic ligands. This novel technique should be regarded as an interesting alternative for crystallization of difficult proteins. The ligand-binding domain (LBD) of human oestrogen receptor α was produced in Escherichia coli as a cleavable thioredoxin (Trx) fusion in order to improve solubility. Crystallization trials with either cleaved and purified LBD or with the purified fusion protein both failed to produce crystals. In another attempt, Trx was not removed from the LBD after endoproteolytic cleavage and its presence promoted nucleation and subsequent crystal growth, which allowed the structure determination of two different LBD–ligand–coactivator peptide complexes at 2.3 Å resolution. This technique is likely to be applicable to other low-solubility proteins.

  9. Metal based synthetic routes to heavy alkaline earth aryloxo complexes involving ligands of moderate steric bulk.

    PubMed

    Deacon, Glen B; Junk, Peter C; Moxey, Graeme J; Guino-o, Marites; Ruhlandt-Senge, Karin

    2009-07-07

    Treatment of an alkaline earth metal (Ca, Sr, Ba) with 2,4,6-trimethylphenol (HOmes) at elevated temperatures in the presence of mercury under solvent-free conditions, followed by extraction of the reaction mixture with 1,2-dimethoxyethane (dme), afforded dinuclear alkaline earth aryloxo complexes [Ae2(Omes)4(dme)4] (Ae = Ca 1, Sr 3, Ba 6). Extraction of the Ca metal and HOmes reaction mixture with thf afforded [Ca3(Omes)6(thf)] 2. In contrast, redox transmetallation ligand exchange reactions between an alkaline earth metal, diphenylmercury and HOmes in dme yielded solely 1 for Ca metal, a mixture of 3 and the methoxide bridged cage [Sr5(Omes)5(OMe)5(dme)4] x 2dme 4 for Sr metal, and solely [Ba5(Omes)5(OMe)5(dme)4] x dme 7 for Ba metal. The methoxide ligands originate from the C-O activation of the dme solvent. Treatment of liquid ammonia activated Sr or Ba metal with HOmes in thf afforded the linear species [Ae3(Omes)6(thf)6] (Ae = Sr 5, Ba 8), and 8 was also obtained from barium metal and HOmes in refluxing thf. The structures of 1 and 3, determined by X-ray crystallography, consist of two six coordinate Ae metal atoms, to each of which is bound a terminal aryloxide ligand, two bridging aryloxide ligands, and chelating and unidentate dme ligands. The structures of 4 and 7 contain five Ae metal atoms arranged on the vertices of a distorted square based pyramid. The Ae atoms are linked by four mu3-OMe ligands and a mu4-OMe ligand. Four bridging aryloxide ligands and four chelating dme ligands complete the coordination spheres of the four seven coordinate Ae atoms at the base of the pyramid, and a terminal aryloxide ligand is bound to the five coordinate apical Ae atom. The structures of 5 and 8 consist of a trinuclear linear array of Ae metal atoms, and contain solely bridging aryloxide ligands. Three thf ligands are bound to each terminal Ae atom, giving all Ae atoms a coordination number of six.

  10. Incorporation of trinuclear lanthanide(III) hydroxo bridged clusters in macrocyclic frameworks.

    PubMed

    Kobyłka, Michał J; Ślepokura, Katarzyna; Acebrón Rodicio, Maria; Paluch, Marta; Lisowski, Jerzy

    2013-11-18

    A cluster of lanthanide(III) or yttrium(III) ions, Ln3(μ3-OH)2, (Ln(III) = Nd(III), Sm(III), Eu(III), Gd(III), Tb(III), Dy(III), Yb(III), or Y(III)) can be bound in the center of a chiral macrocyclic amines H3L1(R), H3L1(S), and H3L2(S) obtained in a reduction of a 3 + 3 condensation product of (1R,2R)- or (1S,2S)-1,2-diaminocyclohexane and 2,6-diformyl-4-methylphenol or 2,6-diformyl-4-tertbutylphenol. X-ray crystal structures of the Nd(III), Sm(III), Gd(III), Dy(III), and Y(III) complexes reveal trinuclear complexes with Ln(III) ions bridged by the phenolate oxygen atoms of the macrocycle as well as by μ3-hydroxo bridges. In the case of the Nd(III) ion, another complex form can be obtained, whose X-ray crystal structure reveals two trinuclear macrocyclic units additionally bridged by hydroxide anions, corresponding to a [Ln3(μ3-OH)]2(μ2-OH)2 cluster encapsulated by two macrocycles. The formation of trinuclear complexes is confirmed additionally by (1)H NMR, electrospray ionization mass spectrometry (ESI MS), and elemental analyses. Titrations of free macrocycles with Sm(III) or Y(III) salts and KOH also indicate that a trinuclear complex is formed in solution. On the other hand, analogous titrations with La(III) salt indicate that this kind of complex is not formed even with the excess of La(III) salt. The magnetic data for the trinuclear Gd(III) indicate weak antiferromagnetic coupling (J = -0.17 cm(-1)) between the Gd(III) ions. For the trinuclear Dy(III) and Tb(III) complexes the χ(M)T vs T plots indicate a more complicated dependence, resulting from the combination of thermal depopulation of mJ sublevels, magnetic anisotropy, and possibly weak antiferromagnetic and ferromagnetic interactions.

  11. Synthesis, characterization and anti-proliferative activity of Cd(II) complexes with NNN type pyrazole-based ligand and pseudohalide ligands as coligand.

    PubMed

    Hopa, Cigdem; Yildirim, Hatice; Kara, Hulya; Kurtaran, Raif; Alkan, Mahir

    2014-01-01

    Cd(II) complexes of tridentate nitrogen donor ligand, 2,6-bis(3,4,5-trimethylpyrazolyl)pyridine (btmpp), Cd(btmpp)X2 (X:Cl, ONO or N(CN)2) have been synthesized and characterized by elemental and spectral (FT-IR, (1)H NMR, (13)C NMR, UV-Vis) analyses, differential thermal analysis and single crystal X-ray diffraction studies. The molecular structure of reported complex 1, revealed distorted square-pyramidal geometry around Cadmium. Complexes 1-3 and corresponding ligand were tested for cytotoxic activity against the human carcinoma cell lines HEP3B (hepatocellular carcinoma), PC3 (prostate adenocarcinoma), MCF7 (breast adenocarcinoma) and Saos2 (osteosarcoma). The results show that, complexes are more cytotoxic than the free ligand and complex 2 is the most cytotoxic complex for PC3.

  12. Synthesis, characterization and anti-proliferative activity of Cd(II) complexes with NNN type pyrazole-based ligand and pseudohalide ligands as coligand

    NASA Astrophysics Data System (ADS)

    Hopa, Cigdem; Yildirim, Hatice; Kara, Hulya; Kurtaran, Raif; Alkan, Mahir

    2014-03-01

    Cd(II) complexes of tridentate nitrogen donor ligand, 2,6-bis(3,4,5-trimethylpyrazolyl)pyridine (btmpp), Cd(btmpp)X2 (X:Cl, ONO or N(CN)2) have been synthesized and characterized by elemental and spectral (FT-IR, 1H NMR, 13C NMR, UV-Vis) analyses, differential thermal analysis and single crystal X-ray diffraction studies. The molecular structure of reported complex 1, revealed distorted square-pyramidal geometry around Cadmium. Complexes 1-3 and corresponding ligand were tested for cytotoxic activity against the human carcinoma cell lines HEP3B (hepatocellular carcinoma), PC3 (prostate adenocarcinoma), MCF7 (breast adenocarcinoma) and Saos2 (osteosarcoma). The results show that, complexes are more cytotoxic than the free ligand and complex 2 is the most cytotoxic complex for PC3.

  13. Synthesis and thermal studies of tetraaza macrocylic ligand and its transition metal complexes. DNA binding affinity of copper complex.

    PubMed

    Saif, M; Mashaly, Mahmoud M; Eid, Mohamed F; Fouad, R

    2011-09-01

    A Tetraaza Macrocylic Ligand (H2L) and its complexes, [Cd(H2L)(OH2)2](NO3)(2)·1/2OH2 (I), [Co(H2L)(OH2)](NO3)(2)·1/2OH2 (II), [Cu(H2L)(NO3)2]·3/2OH2 (III) and [Ni(H2L)(NO3)(OH2)]NO3·OH2 (IV), have been synthesized and characterized on the basis of elemental analysis, molar conductivity, 1H NMR, UV-vis, FT-IR and mass spectroscopy. All results confirm that the prepared compounds have 1:1 metal-to-ligand stoichiometry, octahedral configuration and the ligand behaves as a neutral tetradendate towards the metal ions. [CdL(OH2)2] (V), [CoL(OH2)2] (VI), [CuL(OH2)2] (VII) and [Ni(H2L)(NO3)2] (VIII) were synthesized pyrolytically in solid state from corresponding compounds (I-IV). Analytical results of complexes (V-VIII) show that the ligand behaves either as a neutral tetradendate or dianionic tetradentate ligand towards the metal ions. The binding of H2L and its copper complex (III) to DNA has been investigated by ultraviolet absorption spectroscopy. The experiments indicate that H2L and its copper complex (III) can bind to DNA through an intercalative mode. The H2L and its copper complex (III) exhibited anti-tumor activity against Ehrlich Acites Carcinoma (E.A.C) at the concentration of 100 μg/ml.

  14. Copper and silver complexes bearing flexible hybrid scorpionate ligand mpBm.

    PubMed

    Owen, Gareth R; Gould, P Hugh; Moore, Alexandra; Dyson, Gavin; Haddow, Mairi F; Hamilton, Alex

    2013-08-21

    The addition of flexible scorpionate ligand, [mpBm]⁻{i.e. HB(mt)2(mp), where mt = methyl-2-mercaptoimidazole and mp = 2-mercaptopyridine} to group eleven centres is reported for the first time. The coordination of this hybrid ligand to copper(I) and silver(I) centres in the presence of triphenylphosphine and trialkylphosphine co-ligands has been investigated. The trialkylphosphines coordinates to both copper and silver centres while the less basic triarylphosphine only successfully coordinates to the copper centre. Structural characterisation of [Cu{HB(mt)₂(mp)}(PPh₃)], [Cu{HB(mt)₂(mp)}(PCy₃)] and [Ag{HB(mt)₂(mp)}(PCy₃)] confirm κ³-SSH coordination modes for ligand where one of the mt 'arms' and the mp 'arm' of the scorpionate ligand are coordinated to the metal centre. The second mt 'arm' remains uncoordinated in all three complexes. A comparison has been made with the parent sulfur based scorpionate ligand, [Tm]⁻{HB(mt)₃}.

  15. Syntheses, structures and luminescence of silver(I) sulfonate complexes with nitrogen-containing ligands

    NASA Astrophysics Data System (ADS)

    Dong, Xian-Wu; Wu, Hua; Feng, Yang; Ma, Chao-Hong; Wang, Xiu-Yan; Li, Yu-Jie

    2014-09-01

    In this paper, three new Ag(I) coordination compounds, namely, AgL(3-iso)2 (1), [Ag4L4(bipy)4]·bipy·CH3CN·6H2O (2) and [Ag10L8(hmt)10(H2O)4]·(L)2·15H2O (3) (where 3-iso = 3-methylisoquinoline, bipy = 4,4‧-bipyridine, hmt = hexamethylenetetramine and L = 4-chloro-benzenesulfonate anion), have been synthesized by varying the nitrogen-containing secondary ligands. In compound 1, Ag(I) atoms are coordinated by 3-iso ligands and L anion to generate a discrete molecular structure. For compound 2, when the 3-iso ligand was replaced by bipy, Ag(I) atoms of 2 are linked by bipy ligands to generate a 1D polymeric chain, which are further expanded to a double chain through Ag⋯Ag interaction. In 3, the hmt ligands connect Ag(I) atoms to give a undulate 2D layer. These results indicate that the nitrogen-containing secondary ligands play important roles in the structural formation of the Ag(I) complexes. Moreover, the luminescent properties, elemental analyses and IR spectroscopy of these compounds were also studied.

  16. NMR and theoretical study on interactions between diperoxovanadate complex and pyrazole-like ligands.

    PubMed

    Yu, Xianyong; Liu, Ronghua; Peng, Hongliang; Huang, Haowen; Li, Xiaofang; Zheng, Baishu; Yi, Pinggui; Chen, Zhong

    2010-03-01

    To understand the effects of pyrazole substitution on reaction equilibrium, the interactions between a series of pyrazole-like ligands and [OV(O(2))(2)(D(2)O)](-)/[OV(O(2))(2)(HOD)](-) were explored by using multinuclear ((1)H, (13)C, and (51)V) magnetic resonance, HSQC, and variable temperature NMR in 0.15 mol/L NaCl ionic medium mimicking physiological conditions. These results show that the relative reactivities among the pyrazole-like ligands are 3-methyl-1H-pyrazole approximately 4-methyl-1H-pyrazole approximately 1H-pyrazole>1-methyl-1H-pyrazole. As a result, the main factor which affects the reaction equilibrium is the steric effect instead of the electronic effect of the methyl group of these ligands. A pair of isomers has been formed resulting from the coordination of 3-methyl-1H-pyrazole and a vanadium complex, which is attributed to different types of coordination between the vanadium atom and the ligands. Thus, the competitive coordination leads to the formation of a series of six-coordinate peroxovanadate species [OV(O(2))(2)L](-) (L, pyrazole-like ligands). Moreover, the results of density functional calculations provided a reasonable explanation on the relative reactivity of the pyrazole-like ligands as well as the important role of solvation in these reactions.

  17. The ligand effect on the hydrolytic reactivity of Zn(II) complexes toward phosphate diesters.

    PubMed

    Bonfá, Lodovico; Gatos, Maddalena; Mancin, Fabrizio; Tecilla, Paolo; Tonellato, Umberto

    2003-06-16

    The catalytic effects of the Zn(II) complexes of a series of poliaminic ligands in the hydrolysis of the activated phosphodiesters bis-p-nitrophenyl phosphate (BNP) and 2-hydroxypropyl-p-nitrophenyl phosphate (HPNP) have been investigated. The reactions show first-order rate dependency on both substrate and metal ion complex and a pH dependence which is diagnostic of the acid dissociation of the reactive species. The mechanism of the metal catalyzed transesterification of HPNP has been assessed by solvent isotopic kinetic effect studies and involves the intramolecular nucleophilic attack of the substrate alcoholic group, activated by metal ion coordination. The intrinsic reactivity of the different complexes is controlled by the nature and structure of the ligand: complexes of tridentate ligands, particularly if characterized by a facial coordination mode, are more reactive than those of tetradentate ligands which can hardly allow binding sites for the substrate. In the case of tridentate ligands that form complexes with a facial coordination mode, a linear Brønsted correlation between the reaction rate (log k) and the pK(a) of the active nucleophile is obtained. The beta(nuc) values are 0.75 for the HPNP transesterification and 0.20 for the BNP hydrolysis. These values are indicated as the result of the combination of two opposite Lewis acid effects of the Zn(II) ion: the activation of the substrate and the efficiency of the metal coordinated nucleophile. The latter factor apparently prevails in determining the intrinsic reactivity of the Zn(II) complexes.

  18. Rhenium and technetium tricarbonyl complexes of N-heterocyclic carbene ligands.

    PubMed

    Chan, Chung Ying; Pellegrini, Paul A; Greguric, Ivan; Barnard, Peter J

    2014-10-20

    A strategy for the conjugation of N-heterocyclic carbene (NHC) ligands to biomolecules via amide bond formation is described. Both 1-(2-pyridyl)imidazolium or 1-(2-pyridyl)benzimidazolium salts functionalized with a pendant carboxylic acid group were prepared and coupled to glycine benzyl ester using 1-ethyl-3-(3-(dimethylamino)propyl)carbodiimide. A series of 10 rhenium(I) tricarbonyl complexes of the form [ReX(CO)3(ĈN)] (ĈN is a bidentate NHC ligand, and X is a monodentate anionic ligand: Cl(-), RCO2(-)) were synthesized via a Ag2O transmetalation protocol from the Re(I) precursor compound Re(CO)5Cl. The synthesized azolium salts and Re(I) complexes were characterized by elemental analysis and by (1)H and (13)C NMR spectroscopy, and the molecular structures for one imidazolium salt and seven Re(I) complexes were determined by single-crystal X-ray diffraction. (1)H NMR and mass spectrometry studies for an acetonitrile-d3 solution of [ReCl(CO)3(1-(2-pyridyl)-3-methylimidazolylidene)] show that the monodentate chloride ligand is labile and exchanges with this solvent yielding a cationic acetonitrile adduct. For the first time the labeling of an NHC ligand with technetium-99m is reported. Rapid Tc-99m labeling was achieved by heating the imidazolium salt 1-(2-pyridyl)-3-methylimidazolium iodide and Ag2O in methanol, followed by the addition of fac-[(99m)Tc(OH2)3(CO)3](+). To confirm the structure of the (99m)Tc-labeled complex, the equivalent (99)Tc complex was prepared, and mass spectrometric studies showed that the formed Tc complexes are of the form [(99m/99)Tc(CH3CN)(CO)3(1-(2-pyridyl)-3-methylimidazolylidene)](+) with an acetonitrile molecule coordinated to the metal center.

  19. Ru(II) complexes of new tridentate ligands: unexpected high yield of sensitized 1O2.

    PubMed

    Liu, Yao; Hammitt, Richard; Lutterman, Daniel A; Joyce, Lauren E; Thummel, Randolph P; Turro, Claudia

    2009-01-05

    Ru(II) complexes possessing new tridentate ligands with extended pi systems, pydppx (3-(pyrid-2'-yl)-11,12-dimethyl-dipyrido[3,2-a:2',3'-c]phenazine) and pydppn (3-(pyrid-2'-yl)-4,5,9,16-tetraaza-dibenzo[a,c]naphthacene), were synthesized and characterized. The investigation of the photophysical properties of the series [Ru(tpy)(n)(L)(2-n)](2+) (L = pydppx, pydppn, n = 0-2) reveals markedly different excited state behavior among the complexes. The Ru(II) complexes possessing the pydppx ligand are similar to the pydppz (3-(pyrid-2'-yl)dipyrido[3,2-a:2',3'-c]phenazine) systems, with a lowest energy metal-to-ligand charge transfer excited state with lifetimes of 1-4 ns. In contrast, the lowest energy excited state in the [Ru(tpy)(n)(pydppn)(2-n)](2+) (n = 0, 1) complexes is a ligand-centered (3)pipi* localized on the pydppn ligand with lifetimes of approximately 20 mus. The [Ru(tpy)(n)(pydppn)(2-n)](2+) (n = 0, 1) complexes are able to generate (1)O(2) with approximately 100% efficiency. Both [Ru(tpy)(pydppn)](2+) and [Ru(pydppn)(2)](2+) bind to DNA, however, the former exhibits a approximately 10-fold greater DNA binding constant than the latter. Efficient DNA photocleavage is observed for [Ru(tpy)(pydppn)](2+), owing to its ability to photosensitize the production of (1)O(2), which can mediate the reactivity. Such high quantum yields of (1)O(2) photosensitization of transition metal complexes may be useful in the design of new systems with long-lived excited states for photodynamic therapy.

  20. Dinuclear titanium(IV) complexes from amino acid bridged dicatechol ligands: formation, structure, and conformational analysis.

    PubMed

    Albrecht, M; Napp, M; Schneider, M; Weis, P; Fröhlich, R

    2001-09-17

    Amino acid bridged dicatechol ligands 3a-e-H4 form dinuclear double-stranded coordination compounds [(3a-e)2Ti2(OCH3)2]2- with titanium(IV) ions. Due to the directionality of the ligands, the chirality of the strand, and the chiral complex units, up to seven isomers, I-VII, can be obtained for the double-stranded complexes of ligands 3a-e-H4. The composition of the mixture of isomeric compounds in solution is strongly dependent on the conditions of complex formation. Under thermodynamic control, only a few isomers are obtained, one of which is the major component of the mixture. X-ray structure analyses were performed for K2[(3b)2Ti2(OH)2] and K2[(3d)2Ti2(OH)2] (type I), and for the meso complex Na2[(3e)(3e')Ti2(OCH3)2]. A conformational analysis that uses Ramachandrans method revealed that the conformation of the amino acids in the ligand strands can be compared with those found for amino acids in helical peptide structures. The most favored isomer of [(3)2Ti2(OCH3)2]2- appears to be of type I, with the catecholamide unit located at the N terminus of the ligand strand that binds to a lambda-configurated titanium(IV) complex unit and the dihydroxybenzyl group at the C terminus that coordinates to a delta-configurated titanium(IV) complex unit. The lambda configuration at the N terminus induces the conformation of a right-handed helix in the amino acid residue, while the delta configuration induces the less favored left-handed helix.

  1. Spectral, XRD, SEM and biological activities of transition metal complexes of polydentate ligands containing thiazole moiety

    NASA Astrophysics Data System (ADS)

    Neelakantan, M. A.; Marriappan, S. S.; Dharmaraja, J.; Jeyakumar, T.; Muthukumaran, K.

    2008-11-01

    Metal complexes of o-vanillidene-2-aminobenzothiazole have been prepared and characterized by elemental and spectral (vibrational, electronic, 1H NMR and EPR) data as well as magnetic susceptibility measurements and thermo gravimetric analysis (TG/DTA). The low molar conductance values reveal the non-electrolytic nature of these complexes. The elemental analysis suggests that the stoichiometry to be 1:2 (metal:ligand). Magnetic susceptibility data coupled with electronic spectra suggest that two ligands coordinate to each metal atom by phenolic oxygen and imino nitrogen to form high spin octahedral complex with Co(II), Mn(II) and Ni(II). The fifth and sixth position of metal ion is satisfied with water molecules. The thermal behaviour (TG/DTA) of the synthesised complexes shows that the complexes loss water molecules in the first step followed by decomposition of the ligand. Spin Hamiltonian parameters predict a distorted tetrahedral geometry for the copper complex. XRD and SEM analysis provide the crystalline nature and the morphology of the metal complexes. The in vitro biological activity of the metal chelates is tested against the Gram positive bacteria ( Bacillus amyloliquifacians) and gram negative bacteria ( Pseudomonas species), fungus ( Aspergillus niger) and yeast ( Sacchromyces cereviaceae). Most of the metal chelates exhibited higher biological activities.

  2. Lanthanide complexes derived from hexadentate macrocyclic ligand: synthesis, spectroscopic and thermal investigation.

    PubMed

    Chandra, Sulekh; Tyagi, Monika; Rani, Soni; Kumar, Sumit

    2010-02-01

    The lanthanide complexes derived from (3,5,13,15-tetramethyl 2,6,12,16,21-22-hexaazatricyclo[15.3.I(1-17)I(7-11)]cosa-1(21),2,5,7,9,11(22),12,15,17,19-decane) were synthesized. The complexes were found to have general composition [Ln(L)X(2).H(2)O]X, where Ln=La(3+), Ce(3+), Nd(3+), Sm(3+) and Eu(3+) and X=NO(3)(-) and Cl(-). The ligand was characterized by elemental analyses, IR, Mass, and (1)H NMR spectral studies. All the complexes were characterized by elemental analyses, molar conductance measurements, magnetic susceptibility measurements, IR, Mass, electronic spectral techniques and thermal studies. The ligand acts as a hexadentate and coordinates through four nitrogen atoms of azomethine groups and two nitrogen of pyridine ring. The lanthanum complexes are diamagnetic while the other Ln(III) complexes are paramagnetic. The spectral parameters i.e. nephelauxetic ratio (beta), covalency factor (b(1/2)), Sinha parameter (delta%) and covalency angular overlap parameter (eta) have been calculated from absorption spectra of Nd(III) and Sm(III) complexes. These parameters suggest the metal-ligand covalent bonding. In the present study, the complexes were found to have coordination number nine.

  3. Lanthanide complexes derived from hexadentate macrocyclic ligand: Synthesis, spectroscopic and thermal investigation

    NASA Astrophysics Data System (ADS)

    Chandra, Sulekh; Tyagi, Monika; Rani, Soni; Kumar, Sumit

    2010-02-01

    The lanthanide complexes derived from (3,5,13,15-tetramethyl 2,6,12,16,21-22-hexaazatricyclo[15.3.I 1-17I 7-11]cosa-1(21),2,5,7,9,11(22),12,15,17,19-decane) were synthesized. The complexes were found to have general composition [Ln(L)X 2·H 2O]X, where Ln = La 3+, Ce 3+, Nd 3+, Sm 3+ and Eu 3+ and X = NO 3- and Cl -. The ligand was characterized by elemental analyses, IR, Mass, and 1H NMR spectral studies. All the complexes were characterized by elemental analyses, molar conductance measurements, magnetic susceptibility measurements, IR, Mass, electronic spectral techniques and thermal studies. The ligand acts as a hexadentate and coordinates through four nitrogen atoms of azomethine groups and two nitrogen of pyridine ring. The lanthanum complexes are diamagnetic while the other Ln(III) complexes are paramagnetic. The spectral parameters i.e. nephelauxetic ratio ( β), covalency factor ( b1/2), Sinha parameter ( δ%) and covalency angular overlap parameter ( η) have been calculated from absorption spectra of Nd(III) and Sm(III) complexes. These parameters suggest the metal-ligand covalent bonding. In the present study, the complexes were found to have coordination number nine.

  4. Tuning the olefin epoxidation by manganese(III) complexes of bisphenolate ligands: effect of Lewis basicity of ligands on reactivity.

    PubMed

    Sankaralingam, Muniyandi; Palaniandavar, Mallayan

    2014-01-14

    A new family of manganese(iii) complexes of the type [Mn(L)Cl], where H2L is 1,4-bis(2-hydroxy-benzyl)-1,4-diazepane (), 1,4-bis(2-hydroxy-4-methylbenzyl)-1,4-diazepane (), 1,4-bis(2-hydroxy-3,5-dimethylbenzyl)-1,4-diazepane () and 1,4-bis(2-hydroxy-3,5-di-tert-butylbenzyl)-1,4-diazepane (), has been isolated and studied as a catalyst for epoxidation reaction. Complexes have been characterized using elemental analysis, electronic spectral and electrochemical methods and ESI-MS. The single crystal X-ray structures of and contain the MnN2O2Cl chromophore with a novel square pyramidal coordination geometry (τ: , 0.11; , 0.00). All the complexes possess a distorted square pyramidal coordination geometry in solution, as revealed by the characteristic bands observed in the electronic spectra. A time dependent density functional theory (TD-DFT) calculation has been performed to assist in the assignment of the electronic absorption spectral bands of the complexes. The Mn(iii)/Mn(ii) redox potentials (E1/2) of fall within the narrow range of 0.279-0.320 V. The catalytic ability of the complexes towards olefin epoxidation has been investigated using PhIO as the oxygen source at room temperature under an N2 atmosphere. Addition of N-methylimidazole to the reaction mixture leads to an increase in the epoxide yield. A correlation between the Lewis acidity of the Mn(iii) center as tuned by the substituents on the phenolate ligand, and the epoxide yield and product selectivity has been observed. The present complexes act as better chemoselective catalysts for epoxidation of cyclohexene and styrene rather than cyclooctene.

  5. A novel chiral yttrium complex with a tridentate linked amido-indenyl ligand for intramolecular hydroamination.

    PubMed

    Chai, Zhuo; Hua, Dezhi; Li, Kui; Chu, Jiang; Yang, Gaosheng

    2014-01-07

    A new chiral silicon-linked tridentate amido-indenyl ligand was developed from indene and enantiopure 1,2-cyclohexanediamine. Its yttrium complex was synthesized, characterized and applied to efficiently catalyze the intramolecular hydroamination of non-activated olefins with up to 97% ee.

  6. Amylose inclusion complexes produced by combining various ligands with jet-cooked amylose

    USDA-ARS?s Scientific Manuscript database

    Our research on starch-lipid composites obtained by steam jet cooking showed the involvement of amylose/fatty acid complexes in both spherulite formation and the coatings that form on oil droplets, imparting composite stability. Native fatty acids present in cornstarch granules serve as ligands for...

  7. Synthesis of triple-stranded complexes using bis(dipyrromethene) ligands.

    PubMed

    Zhang, Zhan; Dolphin, David

    2010-12-20

    The reaction of an α-free, β,β'-linked bis(dipyrromethene) ligand with Fe(3+) or Co(3+) led to noninterconvertible triple-stranded helicates and mesocates. In the present context, a stable α-free ligand 2 has been developed and complexation of ligands 1 and 2 with diamagnetic Co(3+), Ga(3+), and In(3+) has been studied. The triple-stranded M(2)1(3) (M = Ga, In) and M(2)2(3) (M = Co, Ga, In) complexes were characterized using matrix-assisted laser desorption ionization time-of-flight spectrometry, (1)H NMR and UV-vis spectroscopy, and X-ray crystallography. Again, the (1)H NMR analysis showed that both the triple-stranded helicates and mesocates were generated in this metal-directed assembly. Consistent with our previous finding on coordinatively inert Co(3+) complexes, variable-temperature NMR spectroscopy indicated that the triple-stranded helicate and mesocate of labile In(3+) did not interconvert in solution, either. However, the diastereoselectivity of the M(2)2(3) complexes was found to improve with an increase in the reaction temperature. Taken together, this study complements the coordination chemistry of poly(dipyrromethene) ligands and provides further insight into the formation of helicates versus mesocates.

  8. Sensing of the concentration and enantiomeric excess of chiral compounds with tropos ligand derived metal complexes.

    PubMed

    Zhang, Peng; Wolf, Christian

    2013-08-11

    Palladium(II) complexes carrying chromophoric tropos ligands show a characteristic UV change and strong Cotton effects upon coordination of amino alcohols or diamines. The distinct (chir)optical responses can be used for instantaneous in situ determination of the concentration and ee of diamines and amino alcohols at low concentrations.

  9. Group 13 and lanthanide complexes with mixed O,S anionic ligands derived from maltol.

    PubMed

    Monga, Vishakha; Patrick, Brian O; Orvig, Chris

    2005-04-18

    Four mixed O,S binding ligand precursors derived from maltol (3-hydroxy-2-methyl-4-pyrone) have been chelated to gallium(III), indium(III), and lanthanide(III) ions to yield a series of metal complexes. The four ligand precursors include two pyranthiones, 3-hydroxy-2-methyl-4-pyranthione, commonly known as thiomaltol (Htma), and 2-ethyl-3-hydroxy-4-pyranthione, commonly known as ethylthiomaltol (Hetma), and two pyridinethiones, 3-hydroxy-2-methyl-4(H)-pyridinethione (Hmppt) and 3-hydroxy-1,2-dimethyl-4-pyridinethione (Hdppt). Dimeric forms of the pyridinethiones, Hmppt dimer and Hdppt dimer, were also isolated and characterized. Complete characterization of the monomeric organic compounds is reported including acidity constants and crystal structures of Htma, Hetma, and Hdppt dimer. Reacting the four monomeric ligand precursors with Ga(3+) and In(3+) ions yielded new tris(bidentate ligand) complexes. X-ray-quality crystals of the fac isomer of Ga(tma)(3) were also obtained. New complexes with a range of lanthanides (Ln(3+)) were also synthesized with the two pyranthiones, Htma and Hetma. The synthesis reactions yielded complexes of the type LnL(3).xH(2)O and LnL(2)(OH).xH(2)O, as indicated by elemental analysis and spectroscopic evidence such as mass spectral data and IR and NMR spectra.

  10. Synthesis and antitumor activity of a series of osmium(VI) nitrido complexes bearing quinolinolato ligands.

    PubMed

    Tang, Quan; Ni, Wen-Xiu; Leung, Chi-Fai; Man, Wai-Lun; Lau, Kenneth King-Kwan; Liang, Yimin; Lam, Yun-Wah; Wong, Wai-Yeung; Peng, Shie-Ming; Liu, Gui-Jian; Lau, Tai-Chu

    2013-11-04

    A series of osmium(VI) nitrido complexes supported by quinolinolato ligands have been prepared and they exhibit promising in vitro anti-cancer activities. These results establish that Os(VI)≡N is a potentially versatile and promising platform for the design of a variety of high-valent anti-cancer drugs.

  11. Crystal structures of complexes of vitamin D receptor ligand-binding domain with lithocholic acid derivatives

    PubMed Central

    Masuno, Hiroyuki; Ikura, Teikichi; Morizono, Daisuke; Orita, Isamu; Yamada, Sachiko; Shimizu, Masato; Ito, Nobutoshi

    2013-01-01

    The secondary bile acid lithocholic acid (LCA) and its derivatives act as selective modulators of the vitamin D receptor (VDR), although their structures fundamentally differ from that of the natural hormone 1α,25-dihydroxyvitamin D3 [1,25(OH)2D3)]. Here, we have determined the crystal structures of the ligand-binding domain of rat VDR (VDR-LBD) in ternary complexes with a synthetic partial peptide of the coactivator MED1 (mediator of RNA polymerase II transcription subunit 1) and four ligands, LCA, 3-keto LCA, LCA acetate, and LCA propionate, with the goal of elucidating their agonistic mechanism. LCA and its derivatives bind to the same ligand-binding pocket (LBP) of VDR-LBD that 1,25(OH)2D3 binds to, but in the opposite orientation; their A-ring is positioned at the top of the LBP, whereas their acyclic tail is located at the bottom of the LBP. However, most of the hydrophobic and hydrophilic interactions observed in the complex with 1,25(OH)2D3 are reproduced in the complexes with LCA and its derivatives. Additional interactions between VDR-LBD and the C-3 substituents of the A-ring are also observed in the complexes with LCA and its derivatives. These may result in the observed difference in the potency among the LCA-type ligands. PMID:23723390

  12. Synthesis and Base Hydrolysis of a Cobalt(III) Complex Coordinated by a Thioether Ligand

    ERIC Educational Resources Information Center

    Roecker, Lee

    2008-01-01

    A two-week laboratory experiment for students in advanced inorganic chemistry is described. Students prepare and characterize a cobalt(III) complex coordinated by a thioether ligand during the first week of the experiment and then study the kinetics of Co-S bond cleavage in basic solution during the second week. The synthetic portion of the…

  13. Synthesis and Base Hydrolysis of a Cobalt(III) Complex Coordinated by a Thioether Ligand

    ERIC Educational Resources Information Center

    Roecker, Lee

    2008-01-01

    A two-week laboratory experiment for students in advanced inorganic chemistry is described. Students prepare and characterize a cobalt(III) complex coordinated by a thioether ligand during the first week of the experiment and then study the kinetics of Co-S bond cleavage in basic solution during the second week. The synthetic portion of the…

  14. Circularly Polarized Luminescence in Enantiopure Europium and Terbium Complexes with Modular, All-Oxygen Donor Ligands

    SciTech Connect

    Seitz, Michael; Do, King; Ingram, Andrew; Moore, Evan; Muller, Gilles; Raymond, Kenneth

    2009-06-04

    The modular syntheses of three new octadentate, enantiopure ligands are reported, one with the bidentate chelating unit 2-hydroxyisophthalamide (IAM) and two with bidentate 1-hydroxy-2-pyridinone (1,2-HOPO) units. A new design principle is introduced for the chiral, non-racemic hexamines which constitute the central backbones for the presented class of ligands. The terbium(III) complex of the IAM ligand, as well as the europium(III) complexes of the 1,2-HOPO ligands, are synthesized and characterized by various techniques (NMR, UV, CD, luminescence spectroscopy). All species exhibit excellent stability and moderate to high luminescence efficiency (quantum yields {phi}{sub Eu} = 0.05-0.08 and {phi}{sub Tb} = 0.30-0.57) in aqueous solution at physiological pH. Special focus is put onto the properties of the complexes in regard to circularly polarized luminescence (CPL). The maximum luminescence dissymmetry factors (glum) in aqueous solution are high with |glum|max = 0.08-0.40. Together with the very favorable general properties (good stability, high quantum yields, long lifetimes), the presented lanthanide complexes can be considered as good candidates for analytical probes based on CPL in biologically relevant environments.

  15. Laser initiation of Fe(II) complexes of 4-nitro-pyrazolyl substituted tetrazine ligands

    DOE PAGES

    Myers, Thomas Winfield; Brown, Kathryn Elizabeth; Chavez, David E.; ...

    2017-02-01

    Here, the synthesis and characterization of new 1,2,4-triazolyl and 4-nitro-pyrazolyl substituted tetrazine ligands has been achieved. The strongly electron deficient 1,2,4-triazolyl substituted ligands did not coordinate Fe(II) metal centers, while the mildly electron deficient 4-nitro-pyrazolyl substituted ligands did coordinate Fe(II) metal centers in a 2:1 ratio of ligand to metal. The thermal stability and mechanical sensitivity characteristics of the complexes are similar to the conventional explosive pentaerythritol tetranitrate. The complexes had strong absorption in the visible region of the spectrum that extended into the near-infrared. In spite of having improved oxygen balances, increased mechanical sensitivity, and similar absorption of NIRmore » light to recently reported Fe(II) tetrazine complexes, these newly synthesized explosives were more difficult to initiate with Nd:YAG pulsed laser light. More specifically, the complexes required lower densities (0.9 g/cm3) to initiate at the same threshold utilized to initiate previous materials at higher densities (1.05 g/cm3).« less

  16. Metalloradical Complexes of Manganese and Chromium Featuring an Oxidatively Rearranged Ligand

    PubMed Central

    Çelenligil-Çetin, Remle; Paraskevopoulou, Patrina; Lalioti, Nikolia; Sanakis, Yiannis; Staples, Richard J.; Rath, Nigam P.; Stavropoulos, Pericles

    2009-01-01

    Redox events involving both metal and ligand sites are receiving increased attention since a number of biological processes direct redox equivalents toward functional residues. Metalloradical synthetic analogs remain scarce and require better definition of their mode of formation and subsequent operation. The trisamido-amine ligand [(RNC6H4)3N]3−, where R is the electron-rich 4-t-BuPh, is employed in this study to generate redox active residues in manganese and chromium complexes. Solutions of [(L1)Mn(II)–THF]− in THF are oxidized by dioxygen to afford [(L1re–1)Mn(III)–(O)2–Mn(III)(L1re–1)]2− as the major product. The rare dinuclear manganese (III,III) core is stabilized by a rearranged ligand that has undergone an one-electron oxidative transformation, followed by retention of the oxidation equivalent as a π radical in an o-diiminobenzosemiquinonate moiety. Magnetic studies indicate that the ligand-centered radical is stabilized by means of extended antiferromagnetic coupling between the S = ½ radical and the adjacent S = 2 Mn(III) site, as well as between the two Mn(III) centers via the dioxo bridge. Electrochemical and EPR data suggest that this system can store higher levels of oxidation potency. Entry to the corresponding Cr(III) chemistry is achieved by employing CrCl3 to access both [(L1)Cr(III)–THF] and [(L1re–1)Cr(III)–THF(Cl)], featuring the intact and the oxidatively rearranged ligands, respectively. The latter is generated by ligand-centered oxidation of the former compound. The rearranged ligand is perceived to be the product of an one-electron oxidation of the intact ligand to afford a metal-bound aminyl radical that subsequently mediates a radical 1,4-(N-to-N) aryl migration. PMID:18937446

  17. Synthesis, characterization and antimicrobial activities of mixed ligand transition metal complexes with isatin monohydrazone Schiff base ligands and heterocyclic nitrogen base

    NASA Astrophysics Data System (ADS)

    Devi, Jai; Batra, Nisha

    2015-01-01

    Mixed ligand complexes of Co(II), Ni(II), Cu(II) and Zn(II) with various uninegative tridentate ligands derived from isatin monohydrazone with 2-hydroxynapthaldehyde/substituted salicylaldehyde and heterocyclic nitrogen base 8-hydroxyquinoline have been synthesized and characterized by elemental analysis, conductometric studies, magnetic susceptibility and spectroscopic techniques (IR, UV-VIS, NMR, mass and ESR). On the basis of these characterizations, it was revealed that Schiff base ligands existed as monobasic tridentate ONO bonded to metal ion through oxygen of carbonyl group, azomethine nitrogen and deprotonated hydroxyl oxygen and heterocyclic nitrogen base 8-hydroxyquinoline existed as monobasic bidentate ON bonded through oxygen of hydroxyl group and nitrogen of quinoline ring with octahedral or distorted octahedral geometry around metal ion. All the compounds have been tested in vitro against various pathogenic Gram positive bacteria, Gram negative bacteria and fungi using different concentrations (25, 50, 100, 200 μg/mL) of ligands and their complexes. Comparative study of antimicrobial activity of ligands, and their mixed complexes indicated that complexes exhibit enhanced activity as compared to free ligands and copper(II) Cu(LIV)(Q)ṡH2O complex was found to be most potent antimicrobial agent.

  18. Catalytic water oxidation by mononuclear Ru complexes with an anionic ancillary ligand.

    PubMed

    Tong, Lianpeng; Inge, A Ken; Duan, Lele; Wang, Lei; Zou, Xiaodong; Sun, Licheng

    2013-03-04

    Mononuclear Ru-based water oxidation catalysts containing anionic ancillary ligands have shown promising catalytic efficiency and intriguing properties. However, their insolubility in water restricts a detailed mechanism investigation. In order to overcome this disadvantage, complexes [Ru(II)(bpc)(bpy)OH2](+) (1(+), bpc = 2,2'-bipyridine-6-carboxylate, bpy = 2,2'-bipyridine) and [Ru(II)(bpc)(pic)3](+) (2(+), pic = 4-picoline) were prepared and fully characterized, which features an anionic tridentate ligand and has enough solubility for spectroscopic study in water. Using Ce(IV) as an electron acceptor, both complexes are able to catalyze O2-evolving reaction with an impressive rate constant. On the basis of the electrochemical and kinetic studies, a water nucleophilic attack pathway was proposed as the dominant catalytic cycle of the catalytic water oxidation by 1(+), within which several intermediates were detected by MS. Meanwhile, an auxiliary pathway that is related to the concentration of Ce(IV) was also revealed. The effect of anionic ligand regarding catalytic water oxidation was discussed explicitly in comparison with previously reported mononuclear Ru catalysts carrying neutral tridentate ligands, for example, 2,2':6',2″-terpyridine (tpy). When 2(+) was oxidized to the trivalent state, one of its picoline ligands dissociated from the Ru center. The rate constant of picoline dissociation was evaluated from time-resolved UV-vis spectra.

  19. DNA interactions of cobalt(III) mixed-polypyridyl complexes containing asymmetric ligands.

    PubMed

    Wang, Xiang-Li; Chao, Hui; Li, Hong; Hong, Xian-Lan; Liu, Yun-Jun; Tan, Li-Feng; Ji, Liang-Nian

    2004-06-01

    Three novel asymmetric ligands, 3-(pyridine-2-yl)-5,6-diphenyl-as-triazine (pdtb), 3-(pyridine-2-yl)-as-triazino[5,6-f]acenaphthylene (pdta) and 3-(pyridine-2-yl)-as-triazino[5,6-f]phenanthroline (pdtp) and their cobalt(III) complexes have been synthesized and characterized. Binding of the three complexes with calf thymus DNA (CT-DNA) has been investigated by spectroscopic methods, viscosity, cyclic voltammetry, and electrophoresis measurements. The experimental results indicate that the size and shape of the intercalated ligand have a marked effect on the binding affinity of complexes to CT-DNA. Complexes 2 and 3 have also been found to promote cleavage of plasmid pBR322 DNA from the supercoiled form I to the open circular form II upon irradiation.

  20. New oxorhenium(V) complexes from the widely used diaminedithiol (DADT) ligand system.

    PubMed

    Chryssou, Katerina; Pelecanou, Maria; Pirmettis, Ioannis C; Papadopoulos, Minas S; Raptopoulou, Catherine; Terzis, Aris; Chiotellis, Efstratios; Stassinopoulou, Chariklia I

    2002-09-09

    Synthesis of the 2,9-dimethyl-4,7-diaza-4-alkyl-2,9-decanedithiol (1, alkyl = morpholinylethyl in a, and alkyl = pyrrolidinylethyl in b), following a widely used synthetic scheme for diaminedithiol (DADT) ligands, led to the isolation of 1-alkyl-2-(1'-methyl-1'-sulfanylethyl)-3-(2' '-methyl-2' '-sulfanylpropyl)diazolidine (3) as the major product. Both ligands 1 and 2 gave complexes with the oxorhenium ReO(V) core. Ligand 1 gave the expected ReO[SNNS] complex (2) with the side chain on nitrogen in the syn configuration. Ligand 3 gave, in the presence of a monodentate aromatic thiol, complexes of the ReO[SNN][S][S] (4) and ReO[SNN][S] type (5), respectively, in which the diazolidine ring has rearranged to a thiazolidine ring. Crystallographic analysis showed that in 4 the coordination geometry about the metal is distorted octahedral where the equatorial plane is defined by the sulfur and one of the nitrogen atoms of the ligand and the two sulfurs of the aromatic thiols, while the axial positions are occupied by the oxygen of the ReO core and the second nitrogen of the ligand. Specifically, complex 4a crystallizes in space group P2(1)/c, a = 15.63(1) A, b = 15.28(2) A, c = 16.07(1) A, beta = 113.78(2) degrees, V = 3512(5) A(3), Z = 4. Complex 4b crystallizes in space group P2(1)/n, a = 14.560(9) A, b = 14.804(9) A, c = 19.85(1) A, beta = 90.94(2) degrees, V = 4278(1) A(3), Z = 4. In 5b, the coordination geometry is distorted square pyramidal with the SNN donor atom of the ligand and the aromatic thiol defining the equatorial plane and the doubly bonded oxygen occupying the apex of the pyramid. Complex 5b crystallizes in space group P(-)1, a = 9.387(5) A, b = 11.306(5) A, c = 14.040(6) A, alpha = 84.51(1) degrees, beta = 84.45(2) degrees, gamma = 87.17(1) degrees, V = 1475(1) A(3), Z = 2. All isolated complexes are neutral and lipophilic. Complete assignments of (1)H and (13)C NMR resonances are reported.

  1. Anticancer Activity and Modes of Action of (arene) ruthenium(II) Complexes Coordinated to C-, N-, and O-ligands.

    PubMed

    Biersack, Bernhard

    2016-01-01

    An overview of anticancer active (arene)ruthenium(II) complexes coordinated to period 2 element-based ligand systems, i.e., carbon-, nitrogen-, and oxygen-coordinated ligands, is provided in this mini-review. A bridge is forged from the large group of anticancer active ruthenium compounds with monodentate and chelating nitrogen ligands via complexes of O,O-chelating ligands to organometallic ruthenium derivatives coordinated to carbon. (Arene)ruthenium(II) complexes with reduced side-effects and enhanced efficacy against cancer are highlighted. Pertinent literature is covered up to 2014.

  2. Synthesis, spectral, thermal and biological studies of mixed ligand complexes with newly prepared Schiff base and 1,10-phenanthroline ligands

    NASA Astrophysics Data System (ADS)

    Abd El-Halim, Hanan F.; Mohamed, Gehad G.; Khalil, Eman A. M.

    2017-10-01

    A series of mixed ligand complexes were prepared from the Schiff base (L1) as a primary ligand, prepared by condensation of oxamide and furan-2-carbaldehyde, and 1,10-phenanthroline (1,10-phen) as a secondary ligand. The Schiff base ligand and its mixed ligand chelates were characterized based on elemental analysis, IR, 1H NMR, thermal analysis, UV-Visible, mass, molar conductance, magnetic moment. X-ray diffraction, solid reflectance and ESR also have been studied. The mixed ligand complexes were found to have the formulae of [M(L1) (1,10-phen)]Clm.nH2O (M = Cr(III) and Fe(III) (m = 3) (n = 0); M = Mn(II), Cu(II) and Cd(II) (m = 2) (n = 0); and M = Co(II) (m = 2) (n = 1), Ni(II) (m = 2) (n = 2) and Zn(II) (m = 2) (n = 3)) and that the geometrical structure of the complexes were octahedral. The parameters of thermodynamic using Coats-Redfern and Horowitz-Metzger equations were calculated. The synthesized Schiff base ligand, 1,10-phenanthroline ligand and Their mixed ligand complexes were also investigated for their antibacterial and antifungal activity against bacterial species (Gram-Ve bacteria: Pseudomonas aeruginosa and Escherichia coli) and (Gram + Ve bacteria: Bacillus subtilis and Streptococcus pneumonia) and fungi (Aspergillus fumigates and Candida albicans). The anticancer activity of the new compounds had been tested against breast (MFC7) and colon (HCT-116) cell lines. The results showed high activity for the synthesized compounds.

  3. Method for preparing radionuclide-labeled chelating agent-ligand complexes

    DOEpatents

    Meares, Claude F.; Li, Min; DeNardo, Sally J.

    1999-01-01

    Radionuclide-labeled chelating agent-ligand complexes that are useful in medical diagnosis or therapy are prepared by reacting a radionuclide, such as .sup.90 Y or .sup.111 In, with a polyfunctional chelating agent to form a radionuclide chelate that is electrically neutral; purifying the chelate by anion exchange chromatography; and reacting the purified chelate with a targeting molecule, such as a monoclonal antibody, to form the complex.

  4. Transient association of the DNA-ligand complex during gel electrophoresis.

    PubMed

    Protozanova, E; Macgregor, R B

    1999-07-01

    DNA frayed wires are extremely stable multistranded complexes arising from the association of oligonucleotides with long terminal runs of consecutive guanines. Frayed wires originating from d(A15G15) have multiple binding sites for short complementary oligonucleotides such as dT10. We examine unusual band patterns obtained when complexes formed between dT10 and DNA frayed wires are resolved on nondenaturing polyacrylamide gels. Since the lifetime of the dT10-frayed wire complexes is shorter than the time of the gel run, the interaction between the components during the gel electrophoresis affects their band patterns. We have conducted chasing experiments to show that (i) the binding of dT10 to the frayed wires can occur during gel electrophoresis, and (ii) dissociation of the complexes occurs during the gel run. Rapid repetitive dissociation-reassociation of the complexes leads to a constant partitioning of dT10 between their binding sites within frayed wires. Consequently, complexes composed of frayed wires and various numbers of bound ligands appear on the gel as a single well-defined band. The mobilities of these bands decrease continuously with the concentration of the ligand reaching saturation when all the binding sites are occupied. This characteristic pattern is observed only for relatively unstable interactions. Longer ligands, i.e., oligonucleotides with higher affinity towards the binding sites, cease to exhibit the dynamic character of interaction during gel electrophoresis. These ligands form long-lived complexes with the frayed wires that appear on the gel as faint smeared bands reflecting the presence of multiple stable complexes.

  5. Determination of equilibrium association constants of ligand-DNA complexes by electrospray mass spectrometry.

    PubMed

    Gabelica, Valérie

    2010-01-01

    Electrospray mass spectrometry can be used to detect ligand-DNA noncovalent complexes formed in solution. This chapter describes how to determine equilibrium association constants of the complexes. Particular attention is devoted to describing how to tune an electrospray mass spectrometer using a 12-mer oligodeoxynucleotides duplex in order to perform these experiments. This protocol can then be applied to any nucleic acid structure that can be ionized with electrospray mass spectrometry.

  6. New perspective on iron-ligand vibrations of oxyheme complexes.

    SciTech Connect

    Li, J.; Peng, Q.; Barabanschikov, A.; Pavlik, J.W.; Alp, E.E.; Sturhahn, W.; Zhao, J.; Schulz, C.E.; Sage, J.T.; Scheidt, W.R.

    2011-09-26

    We report our studies of the vibrational dynamics of iron for three imidazole-ligated oxyheme derivatives that mimic the active sites of histidine-ligated heme proteins complexed with dioxygen. The experimental vibrational data are obtained from nuclear resonance vibrational spectroscopy (NRVS) measurements conducted on both powder samples and oriented single crystals, and which includes several in-plane (ip) and out-of-plane (oop) measurements. Vibrational spectral assignments have been made through a combination of the oriented sample spectra and predictions based on density functional theory (DFT) calculations. The two Fe-O{sub 2} modes that have been previously observed by resonance Raman spectroscopy in heme proteins are clearly shown to be very strongly mixed and are not simply either a bending or stretching mode. In addition, a third Fe-O{sub 2} mode, not previously reported, has been identified. The long-sought Fe-Im stretch, not observed in resonance Raman spectra, has been identified and compared with the frequencies observed for the analogous CO and NO species. The studies also suggest that the in-plane iron motion is anisotropic and is controlled by the orientation of the Fe-O{sub 2} group and not sensitive to the in-plane Fe-N{sub p} bonds and/or imidazole orientations.

  7. New Perspectives on Iron–Ligand Vibrations of Oxyheme Complexes

    PubMed Central

    Li, Jianfeng; Peng, Qian; Barabanschikov, Alexander; Pavlik, Jeffrey W.; Alp, E. Ercan; Sturhahn, Wolfgang; Zhao, Jiyong; Schulz, Charles E.; Sage, J. Timothy

    2011-01-01

    We report our studies of the vibrational dynamics of iron for three imidazole-ligated oxyheme derivatives that mimic the active sites of histidine-ligated heme proteins complexed with dioxygen. The experimental vibrational data are obtained from nuclear resonance vibrational spectroscopy (NRVS) measurements conducted on both powder samples and oriented single-crystals, and which includes several in-plane (ip) and out-of-plane (oop) measurements. Vibrational spectral assignments have been made through a combination of the oriented sample spectra and predictions based on density functional theory (DFT) calculations. The twoFe–O2 modes that have been previously observed by resonance Raman spectroscopy in heme proteins are clearly shown to be very strongly mixed and are not simply either a bending or stretching mode. In addition, a third Fe–O2 mode, not previously reported, has been identified. The long-sought Fe–Im stretch, not observed in resonance Raman spectra, has been identified and compared with the frequencies observed for the analogous CO and NO species. The studies also suggest that the in-plane iron motion is anisotropic and is controlled by the orientation of the Fe–O2 group and not sensitive to the in the in-plane Fe–Np bonds and/or imidazole orientations. PMID:21922552

  8. DFT study of uranyl peroxo complexes with H2O, F-, OH-, CO3(2-), and NO3(-).

    PubMed

    Odoh, Samuel O; Schreckenbach, Georg

    2013-05-06

    The structural and electronic properties of monoperoxo and diperoxo uranyl complexes with aquo, fluoride, hydroxo, carbonate, and nitrate ligands have been studied using scalar relativistic density functional theory (DFT). Only the complexes in which the peroxo ligands are coordinated to the uranyl moiety in a bidentate mode were considered. The calculated binding energies confirm that the affinity of the peroxo ligand for the uranyl group far exceeds that of the F(-), OH(-), CO3(2-), NO3(-), and H2O ligands. The formation of the monoperoxo complexes from UO2(H2O)5(2+) and HO2(-) were found to be exothermic in solution. In contrast, the formation of the monouranyl-diperoxo, UO2(O2)2X2(4-) or UO2(O2)2X(4-/3-) (where X is any of F(-), OH(-), CO3(2-), or NO3(-)), complexes were all found to be endothermic in aqueous solution. This suggests that the monoperoxo species are the terminal monouranyl peroxo complexes in solution, in agreement with recent experimental work. Overall, we find that the properties of the uranyl-peroxo complexes conform to well-known trends: the coordination of the peroxo ligand weakens the U-O(yl) bonds, stabilizes the σ(d) orbitals and causes a mixing between the uranyl π- and peroxo σ- and π-orbitals. The weakening of the U-O(yl) bonds upon peroxide coordination results in uranyl stretching vibrational frequencies that are much lower than those obtained after the coordination of carbonato or hydroxo ligands.

  9. Vertical distributions of iron-(III) complexing ligands in the Southern Ocean

    NASA Astrophysics Data System (ADS)

    Ibisanmi, Enitan; Sander, Sylvia G.; Boyd, Philip W.; Bowie, Andrew R.; Hunter, Keith A.

    2011-11-01

    Electrochemically derived iron speciation data from four vertical profiles to 1000 m depth were obtained during the SAZ-Sense voyage to offshore waters south of Australia in summer (January/February, 2007). The dual aims of this study were firstly to devise a new operational definition to represent the 'complexing capacity', or total concentration of iron-complexing ligands, and subsequently derive vertical profiles of these ligand classes. Secondly, to compare the vertical trends for each ligand class with vertical distributions in oceanic properties thought to control ligand production (i.e. siderophores produced by bacteria and particle remineralisation). Based on simulated ligand titrations, we operationally defined Σ L as the overall class of ligands, which represents all iron-complexing ligands detectable under the analytical conditions chosen. The stability constant of ΣL is a weighted average for these ligands. The ligand titration data suggests the presence of an excess of iron-complexing ligands throughout the water column with an average concentration of [Σ L]=0.75±0.20 nM ( n=47), and an average stability constant of logK=21.50±0.24 ( n=47). Here, based on the range of observed stability constants we define a distinctly different class of extremely strong ligands ( L1) to be the ligand class with a stability constant of logK≥22 , whereas Σ L ranged from 21.00 to 21.95 for logK. L1 had an average concentration and stability constant of 0.42±0.10 nM ( n=14) and 22.97±0.48 ( n=14), respectively. L1 was only found in three of the four depth profiles, and was restricted to the upper ocean (i.e. <200 m depth), whereas Σ L was observed at all sampling depths down to 1000 m. Heterotrophic bacterial abundances (a proxy for siderophore production) were always the highest in the surface mixed layer (50-72 m depth for the 4 stations) then decreased sharply, whereas POC downward flux (a proxy for remineralisation) was greatest below the surface mixed

  10. Methylpalladium complexes with pyrimidine-functionalized N-heterocyclic carbene ligands

    PubMed Central

    Meyer, Dirk

    2016-01-01

    Summary A series of methylpalladium(II) complexes with pyrimidine-NHC ligands carrying different aryl- and alkyl substituents R ([((pym)^(NHC-R))PdII(CH3)X] with X = Cl, CF3COO, CH3) has been prepared by transmetalation reactions from the corresponding silver complexes and chloro(methyl)(cyclooctadiene)palladium(II). The dimethyl(1-(2-pyrimidyl)-3-(2,6-diisopropylphenyl)imidazolin-2-ylidene)palladium(II) complex was synthesized via the free carbene route. All complexes were fully characterized by standard methods and in three cases also by a solid state structure. PMID:27559406

  11. Using Functionalized Silyl Ligands To Suppress Solvent Coordination to Silyl Lanthanide(II) Complexes

    PubMed Central

    2017-01-01

    The reaction of the potassium 1,3-trisilanediide Me2Si[Si(Me3Si)2K]2 with SmI2 and YbI2 was found to give the respective disilylated complexes Me2Si[Si(Me3Si)2]2Sm·2THF and Me2Si[Si(Me3Si)2]2Yb·2THF. Desolvation of coordinated solvent molecules in these complexes made their handling difficult. However, using a number of functionalized silanide ligands, complexes with a diminished number or even no coordinated solvent molecules were obtained ((R3Si)2Ln(THF)x (x = 0–3)). The structures of all new lanthanide compounds were determined by X-ray single-crystal structure analysis. NMR spectroscopic analysis of some Yb–silyl complexes pointed at highly ionic interactions between the silyl ligands and the lanthanides. This bonding picture was supported by DFT calculations at the B3PW91/Basis1 level of theory. Detailed theoretical analysis of a disilylated Eu(II) complex suggests that its singly occupied molecular orbitals (SOMOs) are very close in energy to the ligand silicon lone pairs (HOMO), and SQUID magnetometry measurements of the complex showed a deviation from the expected behavior for a free Eu(II) ion, which might be due to a ligand–metal interaction. PMID:28398724

  12. Cleaved thioredoxin fusion protein enables the crystallization of poorly soluble ERalpha in complex with synthetic ligands.

    PubMed

    Cura, Vincent; Gangloff, Monique; Eiler, Sylvia; Moras, Dino; Ruff, Marc

    2008-01-01

    The ligand-binding domain (LBD) of human oestrogen receptor alpha was produced in Escherichia coli as a cleavable thioredoxin (Trx) fusion in order to improve solubility. Crystallization trials with either cleaved and purified LBD or with the purified fusion protein both failed to produce crystals. In another attempt, Trx was not removed from the LBD after endoproteolytic cleavage and its presence promoted nucleation and subsequent crystal growth, which allowed the structure determination of two different LBD-ligand-coactivator peptide complexes at 2.3 A resolution. This technique is likely to be applicable to other low-solubility proteins.

  13. Isotopic studies of the metal-ligand vibrations in histamine complexes with Copper(II)

    NASA Astrophysics Data System (ADS)

    Drożdżewski, Piotr; Kordon, Ewa

    2000-06-01

    Two known copper complexes of the formulae Cu(hm) 2(ClO 4) 2, Cu(hm)Cl 2 and new, Cu(hm)Br 2 (hm=histamine) have been investigated in the 600-50 cm -1 far-infrared region. Assignments of vibrations related to metal-ligand bonds have been made based on metal isotope substitution, partial deuteration and halogen sensitivity. Copper-hm stretching vibrations have been localised at 420, 417 and 411 cm -1 for modes involving amine nitrogen and at 282, 270, 259 cm -1 for those of imidazole nitrogen. Vibrational coupling between some metal-ligand modes has been postulated.

  14. The formation of a covalent complex between a dipeptide ligand and the src SH2 domain.

    PubMed

    Alligood, K J; Charifson, P S; Crosby, R; Consler, T G; Feldman, P L; Gampe, R T; Gilmer, T M; Jordan, S R; Milstead, M W; Mohr, C; Peel, M R; Rocque, W; Rodriguez, M; Rusnak, D W; Shewchuk, L M; Sternbach, D D

    1998-05-19

    The X-ray crystal structure of the src SH2 domain revealed the presence of a thiol residue (Cys 188) located proximal to the phosphotyrosine portion of a dipeptide ligand. An aldehyde bearing ligand (1) was designed to position an electrophilic carbonyl group in the vicinity of the thiol. X-ray crystallographic and NMR examination of the complex formed between (1) and the src SH2 domain revealed a hemithioacetal formed by addition of the thiol to the aldehyde group with an additional stabilizing hydrogen bond between the acetal hydroxyl and a backbone carbonyl.

  15. Nonheme Oxoiron(IV) Complexes of Pentadentate N5 Ligands: Spectroscopy, Electrochemistry, and Oxidative Reactivity

    PubMed Central

    Wang, Dong; Ray, Kallol; Collins, Michael J.; Farquhar, Erik R.; Frisch, Jonathan R.; Gómez, Laura; Jackson, Timothy A.; Kerscher, Marion; Waleska, Arkadius; Comba, Peter; Costas, Miquel; Que, Lawrence

    2012-01-01

    Oxoiron(IV) species have been found to act as the oxidants in the catalytic cycles of several mononuclear nonheme iron enzymes that activate dioxygen. To gain insight into the factors that govern the oxidative reactivity of such complexes, a series of five synthetic S = 1 [FeIV(O)(LN5)]2+ complexes has been characterized with respect to their spectroscopic and electrochemical properties as well as their relative abilities to carry out oxo transfer and hydrogen atom abstraction. The Fe=O units in these five complexes are supported by neutral pentadentate ligands having a combination of pyridine and tertiary amine donors but with different ligand frameworks. Characterization of the five complexes by X-ray absorption spectroscopy reveals Fe=O bonds of ca. 1.65 Å in length that give rise to the intense 1s→3d pre-edge features indicative of iron centers with substantial deviation from centrosymmetry. Resonance Raman studies show that the five complexes exhibit ν(Fe=O) modes at 825–841 cm−1. Spectropotentiometric experiments in acetonitrile with 0.1 M water reveal that the supporting pentadentate ligands modulate the E1/2(IV/III) redox potentials with values ranging from 0.83 to 1.23 V vs. Fc, providing the first electrochemical determination of the E1/2(IV/III) redox potentials for a series of oxoiron(IV) complexes. The 0.4-V difference in potential may arise from differences in the relative number of pyridine and tertiary amine donors on the LN5 ligand and in the orientations of the pyridine donors relative to the Fe=O bond that are enforced by the ligand architecture. The rates of oxo-atom transfer (OAT) to thioanisole correlate linearly with the increase in the redox potentials, reflecting the relative electrophilicities of the oxoiron(IV) units. However this linear relationship does not extend to the rates of hydrogen-atom transfer (HAT) from 1,3-cyclohexadiene (CHD), 9,10-dihydroanthracene (DHA), and benzyl alcohol, suggesting that the HAT reactions are not

  16. Lead(II) Complexes of Amino Acids, Peptides, and Other Related Ligands of Biological Interest.

    PubMed

    Farkas, Etelka; Buglyó, Péter

    2017-04-10

    Lead(II) forms (NH2,COO-)-chelated mono- and bis-complexes with simple amino acids, while mono-complexes with pH-dependent coordination modes exist with simple dipeptides. These mostly hemidirected complexes have moderate stability. While a weak interaction of side chain imidazole and carboxylate in lead(II)-aminoacidato complexes is found, the thiolate group has an exceptionally high affinity to this metal ion. For example, tridentate (NH2,COO-,S-)-coordination of penicillamine (Pen) and cysteine (Cys) results in an extremely strong interaction with lead(II), but, owing to the sterical effect of the 6s2 pair, a second ligand is not able to coordinate in the above mentioned tridentate way. Although there is no example for a lead(II)-induced deprotonation and coordination of a peptide-amide and the side-chain thiolate in oligopeptides has a somewhat lower basicity compared to that of Pen or Cys, still the Cys-containing peptides interact rather strongly with lead(II). Interestingly, the position of Cys in the peptide influences significantly both the lead-binding ability via different bonding modes and the selectivity for lead(II) against other metal ions, like zinc(II) or cadmium(II). At high ligand excess, however, coordination of three sulfur donors to lead(II) is found with thiolate-containing amino acids and oligopeptides. High basicity oxygens of hydroxamates, hydroxypyronates, and hydroxypyridinonates are also effective lead-binding donors. Some factors affecting the complexation of these ligands with lead(II) are: (i) A larger extent of delocalization along the ring in hydroxypyridinonate results in a more favored metal-binding ability over hydroxypyronate. (ii) Even monohydroxamates are good ligands and form mono- and bis-complexes with lead(II). (iii) In general, dihydroxamates and trihydroxamate-based siderophores, like desferrioxamine B (DFB) and desferricoprogen (DFC), are better binding agents for Pb(II) than the monohydroxamates, but the length and

  17. Protoss: a holistic approach to predict tautomers and protonation states in protein-ligand complexes

    PubMed Central

    2014-01-01

    The calculation of hydrogen positions is a common preprocessing step when working with crystal structures of protein-ligand complexes. An explicit description of hydrogen atoms is generally needed in order to analyze the binding mode of particular ligands or to calculate the associated binding energies. Due to the large number of degrees of freedom resulting from different chemical moieties and the high degree of mutual dependence this problem is anything but trivial. In addition to an efficient algorithm to take care of the complexity resulting from complicated hydrogen bonding networks, a robust chemical model is needed to describe effects such as tautomerism and ionization consistently. We present a novel method for the placement of hydrogen coordinates in protein-ligand complexes which takes tautomers and protonation states of both protein and ligand into account. Our method generates the most probable hydrogen positions on the basis of an optimal hydrogen bonding network using an empirical scoring function. The high quality of our results could be verified by comparison to the manually adjusted Astex diverse set and a remarkably low rate of undesirable hydrogen contacts compared to other tools. PMID:24694216

  18. Ligand-centred oxidative chemistry in sterically hindered salen complexes: an interesting case with nickel.

    PubMed

    Thomas, F

    2016-07-05

    Salen ligands are ubiquitous ligands because they can be readily prepared by condensation of a diamine with two equivalents of salicylaldehyde. They form stable complexes with a great variety of metal ions and find applications in various fields, especially catalysis. The introduction of chirality at the bridge and the adjunction of sterically demanding tert-butyl groups in ortho and para positions of the phenols allow for efficient enantioselective catalysis. On the other hand, early investigations on the oxidation chemistry of phenols highlighted that the incorporation of tert-butyl groups in ortho and para positions can stabilize enormously the one-electron oxidized product e.g. the phenoxyl radical. The redox-activity of sterically hindered salen ligands will be discussed in this perspective article. We will focus our attention on nickel salen complexes since both the metal and the ligand are potentially redox-active, while the oxidized products are stable enough to be characterized by EPR and NIR spectroscopies. Additionally, the one-electron oxidized species could be isolated as single crystals in some instances, giving detailed pictures of their electronic structure. Both the Ni(ii)-radical and Ni(iii) bis(phenolate) valence tautomers are accessible upon one-electron oxidation. The substituents, metal coordination sphere, solvent and temperature are crucial factors that dictate the electronic structure of these one-electron oxidized salen complexes.

  19. Spectroscopic characterization of Lanthanoid derived from a hexadentate macrocyclic ligand: study on antifungal capacity of complexes.

    PubMed

    Chandra, Sulekh; Agrawal, Swati

    2014-04-24

    Complexes of Ce(III), Nd(III), Sm(III) and Eu(III) were synthesized with NO-donor macrocyclic ligand, i.e. 3,5,13,15,21,22-hexaaza-2,6,12,16-tetramethyl-4,14-dithia-tricyclo[15.3.1.1(7-11)]docosane-1(21),2,5,7,9,11(22),12,15,17,19-decaene. The ligand was obtained by the condensation of 2,6-diacetylpyridine with thiourea and characterized by elemental analysis, mass, IR and (1)H NMR spectral studies. All the complexes were characterized by elemental analyses, molar conductance measurements, magnetic susceptibility measurements, IR, mass, electronic spectral techniques and thermal studies. The ligand acts as a hexadentate and coordinated through four nitrogen atoms of azomethine groups and two nitrogen atoms of pyridine ring. The value of spectral parameters i.e. nephelauxetic effect (b), covalency factor (b(1/2)), Sinha parameter (δ%) and covalency angular overlap parameter (η) account for the covalent nature of the complexes. The macrocyclic ligand and its Lanthanoid were tested in vitro against two plant pathogenic fungi in order to assess their antifungal capacity.

  20. Metal complexes of ONO donor Schiff base ligand as a new class of bioactive compounds; Synthesis, characterization and biological evolution

    NASA Astrophysics Data System (ADS)

    Kumar Naik, K. H.; Selvaraj, S.; Naik, Nagaraja

    2014-10-01

    Present work reviews that, the synthesis of (E)-N";-((7-hydroxy-4-methyl-2-oxo-2H-chromen-8-yl)methylene)benzohydrazide [L] ligand and their metal complexes. The colored complexes were prepared of type [M2+L]X2, where M2+ = Mn, Co, Ni, Cu, Sr and Cd, L = (7-hydroxy-4-methyl-2-oxo-2H-chromen-8-yl)methylene)benzohydrazide, X = Cl-. Ligand derived from the condensation of 8-formyl-7-hydroxy-4-methylcoumarin and benzohydrazide in the molar ratio 1:1 and in the molar ratio 1:2 for metal complexes have been prepared. The chelation of the ligand to metal ions occurs through the both oxygen groups, as well as the nitrogen atoms of the azomethine group of the ligand. Reactions of the Schiff base ligand with Manganese(II), Cobalt(II), Nickel(II), Copper(II), Strontium(II), and Cadmium(II) afforded the corresponding metal complexes. The structures of the obtained ligand and their respective metal complexes were elucidated by infra-red, elemental analysis, Double beam UV-visible spectra, conductometric measurements, magnetic susceptibility measurements and also thermochemical studies. The metal complex exhibits octahedral coordination geometrical arrangement. Schiff base ligand and their metal complexes were tested against antioxidants, antidiabetic and antimicrobial activities have been studied. The Schiff base metal complexes emerges effective α-glucosidase inhibitory activity than free Schiff base ligand.

  1. Hypercoordinate silicon complexes based on hydrazide ligands. A remarkably flexible molecular system.

    PubMed

    Kost, Daniel; Kalikhman, Inna

    2009-02-17

    Though only one row apart on the periodic table, silicon greatly differs from carbon in its ability to readily form five- and six-coordinate complexes, termed "hypercoordinate silicon compounds". The assorted chemistry of these compounds is varied in both structures and reactivity and has generated a flurry of innovative research endeavors in recent years. This Account summarizes the latest work done on a specific class of hypercoordinate silicon compounds, specifically those with two hydrazide-derived chelate rings. This family is especially interesting due to the ability to form multiple penta- and hexacoordinate complexes, the chemical reactivity of pentacoordinate complexes, and the observation of intermolecular ligand crossovers in hexacoordinate complexes. Pentacoordinate complexes in this family exhibit marked structural flexibility, as demonstrated by the construction of a complete hypothetical Berry-pseudorotation reaction coordinate generated from individual crystallographic molecular structures. Although hexacoordinate complexes generally crystallize as octahedra, with a decrease in the ligand donor strength the complexes can crystallize as bicapped tetrahedra. Hexacoordinate complexes bearing a halogen ligand undergo a solvent-driven equilibrium ionic dissociation, which is controlled by solvent, temperature, counterion, and chelate structure and has been directly demonstrated by conductivity measurements and temperature-dependent (29)Si NMR. Hexacoordinate silicon complexes can also undergo reversible neutral nonionic dissociation of the N-Si dative bond. Ionic pentacoordinate siliconium salts react readily via methyl halide elimination, initiated by their own counterion acting as a base. Pentacoordinate complexes can also undergo intramolecular aldol condensations of imines, which may find potential as a template for organic synthesis. In addition, these complexes are capable of performing an uncatalyzed intramolecular hydrosilylation of imine double

  2. Fast force field-based optimization of protein-ligand complexes with graphics processor.

    PubMed

    Heinzerling, Lennart; Klein, Robert; Rarey, Matthias

    2012-12-15

    Usually based on molecular mechanics force fields, the post-optimization of ligand poses is typically the most time-consuming step in protein-ligand docking procedures. In return, it bears the potential to overcome the limitations of discretized conformation models. Because of the parallel nature of the problem, recent graphics processing units (GPUs) can be applied to address this dilemma. We present a novel algorithmic approach for parallelizing and thus massively speeding up protein-ligand complex optimizations with GPUs. The method, customized to pose-optimization, performs at least 100 times faster than widely used CPU-based optimization tools. An improvement in Root-Mean-Square Distance (RMSD) compared to the original docking pose of up to 42% can be achieved. Copyright © 2012 Wiley Periodicals, Inc.

  3. Synthesis and structure of a Zwitterionic Nd complex containing aminophenoxide ligands

    NASA Astrophysics Data System (ADS)

    Wei, Pingrong; Atwood, David A.

    1999-03-01

    In the course of attempting to prepare molecular precursors to lanthanide-aluminum oxide materials the unique Zwitterionic complex, Nd(H 2L) 3(CF 3SO 3) 3 ( 1), was discovered (L = [2,4-( tBu) 2-6-(CH 2N iPr)PhO]). In the crystal structure of ( 1) the three-triflate groups and the three oxygens of the aminophenoxide ligand (H 2L) coordinate the Nd atom. To maintain charge balance the three ligands are protonated at the amine nitrogens. This explains the fact that the ligand is monodentate and does not displace one (or more) of the triflate groups to form a chelated cation. Both hydrogens of the ammonium groups are hydrogen-bonded to oxygens of the triflates.

  4. Dinuclear Calcium Complexes with Intramolecularly NH.O Hydrogen-Bonded Dicarboxylate Ligands.

    PubMed

    Ueyama, Norikazu; Takeda, Jiro; Yamada, Yusuke; Onoda, Akira; Okamura Ta, Taka-aki; Nakamura, Akira

    1999-02-08

    A novel dinuclear calcium complex, [Ca(2){(2-OCO-3-CH(3)C(6)H(3)NHCO)(2)C(CH(3))(2)}(2)(CH(3)OH)(6)] (1), was synthesized as a structural model of 8-coordinated Ca(II) ions in the double calcium-binding site of thermolysin. The complex has four NH.O hydrogen bonds between the amide NH and the carboxylate oxygen anion. Two types of bridging coordination of the carboxylate ligand to Ca(II) were found in 1. The amide NH forms a strong NH.O hydrogen bond with the anionic oxygen of the two carboxylate oxygens. A ligand-exchange reaction between the dinuclear calcium complex and eight equimolar amounts of 2,4,6-trimethylbenzoic acid or 2-CH(3)-6-t-BuCONHC(6)H(3)COOH indicates that the NH.O hydrogen bond prevents the dissociation of the Ca-O bond.

  5. RutheniumII complexes bearing fused polycyclic ligands: from fundamental aspects to potential applications.

    PubMed

    Troian-Gautier, Ludovic; Moucheron, Cécile

    2014-04-22

    In this review, we first discuss the photophysics reported in the literature for mononuclear ruthenium complexes bearing ligands with extended aromaticity such as dipyrido[3,2-a:2',3'-c]phenazine (DPPZ), tetrapyrido[3,2-a:2',3'-c:3'',2''-h:2''',3'''-j]-phenazine (TPPHZ),  tetrapyrido[3,2-a:2',3'-c:3'',2''-h:2''',3'''-j]acridine (TPAC), 1,10-phenanthrolino[5,6-b]1,4,5,8,9,12-hexaazatriphenylene (PHEHAT) 9,11,20,22-tetraaza- tetrapyrido[3,2-a:2',3'-c:3'',2''-l:2''',3'''-n]pentacene (TATPP), etc. Photophysical properties of binuclear and polynuclear complexes based on these extended ligands are then reported. We finally develop the use of binuclear complexes with extended π-systems for applications such as photocatalysis.

  6. Ligand effects on nitrate reduction by zero-valent iron: Role of surface complexation.

    PubMed

    Song, Xiaojie; Chen, Zhihao; Wang, Xiaomeng; Zhang, Shujuan

    2017-05-01

    Surface passivation is a key limiting factor in the application of zero-valent iron (ZVI) for water remediation. Addition of ligands is a useful approach to overcome this issue. In this work, a small amount of acetylacetone (AA) (0.5 mM) was found highly efficient to enhance the reduction of nitrate by ZVI at near neutral conditions (pH 6.0) with the formation of considerable black coating on ZVI. At an initial nitrate concentration of 20 mg N/L, the pseudo first-order reduction rate constant of nitrate in the ZVI-AA-NO3(-) system was 0.0991 h(-1), which was 52 times higher than that in the ZVI-NO3(-) system. Under otherwise identical conditions, the other five ligands, including EDTA, formate, acetate, oxalate, and phosphate, had negligible effects. Based on the pKa values of these ligands and the final species of iron, the ligand effects on nitrate reduction by ZVI were summarized from three aspects: (1) the ability to offer potentially dissociable protons from the ligands; (2) the complexation ability to eliminate iron (hydr)oxide precipitates from the surface of ZVI; and (3) the ability to lower down the redox potentials of iron species. The good performance of AA in these three aspects makes it advantage over the other ligands. A cycle test up to six runs demonstrates that AA could continuously take effect in the ZVI system. The results here point out the potential of AA as an effective ligand in ZVI system for enhanced contaminant transformation.

  7. Pyridylalkylamine ligands and their palladium complexes: structure and reactivity revisited by NMR.

    PubMed

    Requet, Alexandre; Colin, Olivier; Bourdreux, Flavien; Salim, Salim M; Marque, Sylvain; Thomassigny, Christine; Greck, Christine; Farjon, Jonathan; Prim, Damien

    2014-06-01

    Pyridylmethylamines or pma are versatile platforms for different catalytic transformations. Five pma-ligands and their respective Pd complexes have been studied by liquid state NMR. By comparing (1)H, (13)C and (15)N chemical shifts for each pma/pma-Pd couple, a general trend for the metallacycle atoms concerns variations of the electronic distribution at the pendant arm, especially at the nitrogen atom of the ligand. Moreover, the increase of the chemical shift of the pendant arm nitrogen atom from primary to tertiary amine is also related to the increase of crowding within the complex. This statement is in good agreement with X-ray data collected for several complexes. Catalytic results for the Suzuki-Miyaura reaction involving the pma-Pd complexes showed within this series that a sterically crowded and electron-rich ligand in the metallacycle was essential to reach the coupling product with a good selectivity. In this context, NMR study of chemical shifts of all active nuclei especially in the metallacycle could give a trend of reactivity in the studied family of pma-Pd complexes.

  8. Transition metal complexes supported by a neutral tetraamine ligand containing N,N-dimethylaniline units.

    PubMed

    Chu, Lei; Hardcastle, Kenneth I; MacBeth, Cora E

    2010-08-16

    First-row transition metal-halide complexes of tris(2-dimethylaminophenyl)amine, L(Me), have been synthesized and characterized. X-ray crystallographic studies on [Co(L(Me))Br]BPh(4), [Ni(L(Me))Cl]BPh(4), [Fe(L(Me))Cl]BPh(4), and [Cu(L(Me))Cl]BF(4) have been performed, and in all cases the ligand produces five-coordinate complexes with distorted trigonal bipyramidal coordination geometries. Where possible, comparisons have been made to the structures of related neutral tripodal ligands. Spectroscopic and magnetic studies of these complexes are also described. The Cu(I)-carbonyl complexes [Cu(L(Me))(CO)]PF(6) and [Cu(Me(6)tren)(CO)]PF(6) (Me(6)tren = tris(N,N-dimethylaminoethyl)amine) have also been prepared. Infrared spectroscopic investigations of these carbonyl complexes confirm that L(Me) is a less electron donating ligand than Me(6)tren and indicate that L(Me) can impart a different coordination number in the solid-state.

  9. Novel Zinc(II) Complexes of Heterocyclic Ligands as Antimicrobial Agents: Synthesis, Characterisation, and Antimicrobial Studies

    PubMed Central

    Yamgar, Ramesh S.; Nivid, Y.; Nalawade, Satish; Mandewale, Mustapha; Atram, R. G.; Sawant, Sudhir S.

    2014-01-01

    The synthesis and antimicrobial activity of novel Zn(II) metal complexes derived from three novel heterocyclic Schiff base ligands 8-[(Z)-{[3-(N-methylamino)propyl]imino}methyl]-7-hydroxy-4-methyl-2H-chromen-2-one, 2-[(E)-{[4-(1H-1,2,4-triazol-1-ylmethyl)phenyl]imino}methyl]phenol, and (4S)-4-{4-[(E)-(2-hydroxybenzylidene)amino]benzyl}-1,3-oxazolidin-2-one have been described. These Schiff base ligands and metal complexes are characterised by spectroscopic techniques. According to these data, we propose an octahedral geometry to all the metal complexes. Antimicrobial activity of the Schiff base ligand and its metal complexes was studied against Gram negative bacteria: E. coli and Pseudomonas fluorescens, Gram positive bacteria: Staphylococcus aureus, and also against fungi, that is, C. albicans and A. niger. Some of the metal complexes show significant antifungal activity (MIC < 0.2 μg/mL). The “in vitro” data has identified [Zn(NMAPIMHMC)2]·2H2O, [Zn(TMPIMP)2]·2H2O, and [Zn(HBABO)2]·2H2O as potential therapeutic antifungal agents against C. albicans and A. niger. PMID:24707242

  10. Ligand-dependent localization and function of ORP-VAP complexes at membrane contact sites.

    PubMed

    Weber-Boyvat, Marion; Kentala, Henriikka; Peränen, Johan; Olkkonen, Vesa M

    2015-05-01

    Oxysterol-binding protein/OSBP-related proteins (ORPs) constitute a conserved family of sterol/phospholipid-binding proteins with lipid transporter or sensor functions. We investigated the spatial occurrence and regulation of the interactions of human OSBP/ORPs or the S. cerevisiae orthologs, the Osh (OSBP homolog) proteins, with their endoplasmic reticulum (ER) anchors, the VAMP-associated proteins (VAPs), by employing bimolecular fluorescence complementation and pull-down set-ups. The ORP-VAP interactions localize frequently at distinct subcellular sites, shown in several cases to represent membrane contact sites (MCSs). Using established ORP ligand-binding domain mutants and pull-down assays with recombinant proteins, we show that ORP liganding regulates the ORP-VAP association, alters the subcellular targeting of ORP-VAP complexes, or modifies organelle morphology. There is distinct protein specificity in the effects of the mutants on subcellular targeting of ORP-VAP complexes. We provide evidence that complexes of human ORP2 and VAPs at ER-lipid droplet interfaces regulate the hydrolysis of triglycerides and lipid droplet turnover. The data suggest evolutionarily conserved, complex ligand-dependent functions of ORP-VAP complexes at MCSs, with implications for cellular lipid homeostasis and signaling.

  11. Aspects of C-H Activation in Metal Complexes Containing Sulfur Ligands

    SciTech Connect

    Rakowski-DuBois, Mary C.

    2004-10-08

    The research project proposed to synthesize new metal complexes with sulfido, disulfido and other types of reactive sulfur ligands, and to explore the joint reactivity of metal and sulfur ligands with hydrogen and organic molecules. The overall objective was to investigate reaction pathways relevant to those observed for the heterogeneous metal sulfide catalysts which promote hydrogen activation, hydrogenation-dehydrogenation of organic substrates, and hydrogenolysis of carbon-heteroatom bonds. Particular emphasis was placed on CpRe derivatives (where Cp might be C5H5 or alkylated versions) so that comparisons could be made with the previously studied CpMo complexes, which showed extensive reactivity at the sulfur ligands. Heterogeneous rhenium sulfides generally show higher catalytic activity than molybdenum sulfides, and this is attributed, in part, to the weaker Re-S bond strength, relative to the moybdenum-sulfur bond. In our studies of discrete Re-sulfide complexes, we have also observed evidence for weaker Re-S bonds relative to the molybdenum systems. In addition we have characterized novel hydrogen activation by rhenium sulfido complexes, as well as carbon-hydrogen, carbon-sulfur and metal sulfur bond cleavage reactions. Hydrogen Activation. The complex Cp{prime}ReCl2S3 was synthesized in ca 70% yield and characterized by an X-ray diffraction study which confirms that the complex contains a {eta}2-trisulfide ligand. The cyclic voltammogram of Cp{prime}ReCl2S3 shows a wide window of redox stability with an irreversible reduction wave at -0.97 V and an irreversible oxidation at +1.03 V vs Fc. Nevertheless, the complex undergoes a facile reaction with hydrogen at 50 C to form H2S and a new dinuclear sulfido bridged rhenium complex. This reaction is of interest because it is the first example of the hydrogenolysis of a discrete metal polysulfide complex to produce H2S, a reaction also observed for heterogeneous rhenium sulfides. The reaction contrasts with

  12. Synthesis, characterization and biological activities of mixed ligand Zr(IV) complexes.

    PubMed

    Malghe, Yuvraj S; Prabhu, Rakesh C; Raut, Rajesh W

    2009-01-01

    Mixed ligand ternary Zr(IV) complexes of type [M(Q)2LNO3xH2O] have been synthesized using 8-hydroxyquinoline (HQ) as a primary ligand and N- and/O-donor amino acids (HL) such as L-serine, L-alanine and glycine as secondary ligands. These complexes were characterized on the basis of elemental analysis, conductance measurement, spectral and thermal studies. The molar conductance study of the complexes in DMF solvent signifies their non-electrolytic nature whereas the thermal analyses specify presence of a coordinated water molecule. The complexes were tested for antifungal and antibacterial activity by using agar well diffusion bioassay. The antibacterial activity was tested against the pathogenic bacteria Staphylococcus aureus and Enterococcus faecium. The results obtained were evaluated with antibacterial standard vancomycin. The antifungal activity was tested against Candida albicans, Candida krusei, Aspergillus fumigatus and the results obtained were compared with antifungal standard amphotericin B. The complexes were also screened for cytotoxicity studies against Ehrlich ascites cells and Daltons lymphoma ascites cells and show very low cytotoxicity.

  13. Oxoiron(IV) Tetramethylcyclam Complexes with Axial Carboxylate Ligands: Effect of Tethering the Carboxylate on Reactivity.

    PubMed

    Bigelow, Jennifer O; England, Jason; Klein, Johannes E M N; Farquhar, Erik R; Frisch, Jonathan R; Martinho, Marlène; Mandal, Debasish; Münck, Eckard; Shaik, Sason; Que, Lawrence

    2017-03-20

    Oxoiron(IV) species are implicated as reactive intermediates in nonheme monoiron oxygenases, often acting as the agent for hydrogen-atom transfer from substrate. A histidine is the most likely ligand trans to the oxo unit in most enzymes characterized thus far but is replaced by a carboxylate in the case of isopenicillin N synthase. As the effect of a trans carboxylate ligand on the properties of the oxoiron(IV) unit has not been systematically studied, we have synthesized and characterized four oxoiron(IV) complexes supported by the tetramethylcyclam (TMC) macrocycle and having a carboxylate ligand trans to the oxo unit. Two complexes have acetate or propionate axial ligands, while the other two have the carboxylate functionality tethered to the macrocyclic ligand framework by one or two methylene units. Interestingly, these four complexes exhibit substrate oxidation rates that differ by more than 100-fold, despite having Ep,c values for the reduction of the Fe═O unit that span a range of only 130 mV. Eyring parameters for 1,4-cyclohexadiene oxidation show that reactivity differences originate from differences in activation enthalpy between complexes with tethered carboxylates and those with untethered carboxylates, in agreement with computational results. As noted previously for the initial subset of four complexes, the logarithms of the oxygen atom transfer rates of 11 complexes of the Fe(IV)(O)TMC(X) series increase linearly with the observed Ep,c values, reflecting the electrophilicity of the Fe═O unit. In contrast, no correlation with Ep,c values is observed for the corresponding hydrogen atom transfer (HAT) reaction rates; instead, the HAT rates increase as the computed triplet-quintet spin state gap narrows, consistent with Shaik's two-state-reactivity model. In fact, the two complexes with untethered carboxylates are among the most reactive HAT agents in this series, demonstrating that the axial ligand can play a key role in tuning the HAT reactivity

  14. Fluorescence of 5-arylvinyl-5'-methyl-2,2'-bipyridyl ligands and their zinc complexes.

    PubMed

    Younes, Ali H; Zhang, Lu; Clark, Ronald J; Zhu, Lei

    2009-11-20

    The photophysical properties of 5-arylvinyl-5'-methyl-2,2'-bipyridyls (AVMBs, 1-9, 11) and their zinc complexes were studied. Similar 2,2'-bipyridyl-based ligands have been applied as optical sensors for metal ions and sensitizers for solar energy conversion. The goal of this investigation is to reveal the factors that determine the emission band shift and fluorescence quantum yield change of the title ligand system upon zinc binding. The outcome of this study will not only advance the fundamental understanding of the coordination-driven photophysical processes embodied in the AVMB platform but facilitate the rational design of fluorescent probes for metal ions, particularly zinc. The AVMB ligands were synthesized using the Horner-Wadsworth-Emmons reaction. AVMBs containing electron-donating aryl groups show absorption and emission in the visible region, which can be assigned to charge-transfer transitions as supported by solvent-dependency and computational studies. The binding between AVMB ligands and zinc ion in acetonitrile was studied using isothermal titration calorimetry (ITC). A multicomponent equilibrium model is suggested that explains the multiple transitions evidenced in fluorescence titration isotherms. Coordination to zinc ion stabilizes the charge-transfer excited state of an AVMB ligand with an electron-donating aryl substituent, consequently results in bathochromic shifts in both absorption and emission. However, unlike the emission band shift, the fluorescence quantum yield change upon zinc complex formation does not have an intuitive correlation with the electronic nature of the aryl group. Lifetime measurements using the Time-Correlated Single Photon Counting method enabled the determination of nonradiative and radiative decay rate constants. Both rates of an AVMB ligand decrease upon zinc binding. The collective effect gives rise to the change in fluorescence quantum yield with the apparent lack of correlation with the electronic property of

  15. Geometric and Electronic Structure of a Peroxomanganese(III) Complex Supported by a Scorpionate Ligand

    PubMed Central

    Colmer, Hannah E.; Geiger, Robert A.; Leto, Domenick F.; Wijeratne, Gayan B.; Day, Victor W.; Jackson, Timothy A.

    2014-01-01

    A monomeric MnII complex has been prepared with the facially-coordinating TpPh2 ligand, (TpPh2 = hydrotris(3,5-diphenylpyrazol-1-yl)borate). The X-ray crystal structure shows three coordinating solvent molecules resulting in a six-coordinate complex with Mn-ligand bond lengths that are consistent with a high-spin MnII ion. Treatment of this MnII complex with excess KO2 at room temperature resulted in the formation of a MnIII-O2 complex that is stable for several days at ambient conditions, allowing for the determination of the X-ray crystal structure of this intermediate. The electronic structure of this peroxomanganese(III) adduct was examined by using electronic absorption, electron paramagnetic resonance (EPR), low-temperature magnetic circular dichroism (MCD), and variable-temperature variable-field (VTVH) MCD spectroscopies. Density functional theory (DFT), time-dependent (TD)-DFT, and multireference ab initio CASSCF/NEVPT2 calculations were used to assign the electronic transitions and further investigate the electronic structure of the peroxomanganese(III) species. The lowest ligand-field transition in the electronic absorption spectrum of the MnIII-O2 complex exhibits a blue shift in energy compared to other previously characterized peroxomanganese(III) complexes that results from a large axial bond elongation, reducing the metal-ligand covalency and stabilizing the σ-antibonding Mn dz2 MO that is the donor MO for this transition. PMID:25312785

  16. Metal complexes with oxygen-functionalized NHC ligands: synthesis and applications.

    PubMed

    Hameury, Sophie; de Frémont, Pierre; Braunstein, Pierre

    2017-02-06

    Ligand design has met with considerable success with both categories of hybrid ligands, which are characterized by chemically different donor groups, and of N-heterocyclic carbenes (NHCs). Their spectacular development and diversity are attracting worldwide interest and offers almost unlimited diversity and potential in e.g. coordination/organometallic main group and transition metal chemistry, catalysis, medicinal chemistry and materials science. This review aims at providing a comprehensive update on a specific class of ligands that has enjoyed much attention in the past few years, at the intersection between the two categories mentioned above, that of hybrid NHC ligands in which the functionality associated with the carbene donor is of the oxygen-donor type. For each type of oxygen-donor present in such chelating (Section 1) or bridging (Section 2) hybrid ligands, we will examine the synthesis, structures and reactivity of their metal complexes and their applications, with a special focus on homogeneous catalysis (Section 3). Thus, hydrogenation, C-H bond activation, C-C, C-N, C-O bond formation, hydrolysis of silanes, oligomerization, polymerization, metathesis, hydrosilylation, C-C bond cleavage, acceptorless dehydrogenation, dehalogenation/hydrogen transfer, oxidation and reduction reactions will be successively presented in a tabular manner, to facilitate an overview and a rapid identification of the relevant publications describing which metals associated with a given oxygen functionality are most suitable. The literature coverage includes the year 2015.

  17. Simulation of metal-ligand self-assembly into spherical complex M6L8.

    PubMed

    Yoneya, Makoto; Yamaguchi, Tomohiko; Sato, Sota; Fujita, Makoto

    2012-09-05

    Molecular dynamics simulations were performed to study the self-assembly of a spherical complex through metal-ligand coordination interactions. M(6)L(8), a nanosphere with six palladium ions and eight pyridine-capped tridentate ligands, was selected as a target system. We successfully observed the spontaneous formation of spherical shaped M(6)L(8) cages over the course of our simulations, starting from random initial placement of the metals and ligands. To simulate spontaneous coordination bond formations and breaks, the cationic dummy atom method was employed to model nonbonded metal-ligand interactions. A coarse-grained solvent model was used to fill the gap between the time scale of the supramolecular self-assembly and that accessible by common molecular dynamics simulation. The simulated formation process occurred in the distinct three-stage (assembly, evolution, fixation) process that is well correlated with the experimental results. We found that the difference of the lifetime (or the ligand exchange rate) between the smaller-sized incomplete clusters and the completed M(6)L(8) nanospheres is crucially important in their supramolecular self-assembly.

  18. Soluble Mn(III)-L complexes are abundant in oxygenated waters and stabilized by humic ligands

    NASA Astrophysics Data System (ADS)

    Oldham, Véronique E.; Mucci, Alfonso; Tebo, Bradley M.; Luther, George W.

    2017-02-01

    Dissolved Mn (dMnT) is thought to be dominated by metastable Mn(II) in the presence of oxygen, as the stable form is insoluble Mn(IV). We show, for the first time, that Mn(III) is also stable as a soluble species in the oxygenated water column, when stabilized by organic ligands as Mn(III)-L complexes. We measured Mn(III)-L complexes in the oxygenated waters of a coastal fjord and a hemipelagic system where they make up to 86% of the dMnT. Although Mn(III) forms similar complexes to Fe(III), unlike most of the analogous Fe(III)-L complexes, the Mn(III)-L complexes are not colloidal, as they pass through both 0.20 μm and 0.02 μm filters. Depending on the kinetic stability of the Mn(III) complexes and the microbial community of a given system, these Mn(III)-L complexes are capable of donating or accepting electrons and may therefore serve as both reductants or oxidants, can be biologically available, and can thus participate in a multitude of redox reactions and biogeochemical processes. Furthermore, sample acidification experiments revealed that Mn(III) binding to humic ligands is responsible for up to 100% of this complexation, which can influence the formation of other metal complexes including Fe(III) and thus impact nutrient availability and uptake. Hence, humic ligands may play a greater role in dissolved Mn transport from coastal areas to the ocean than previously thought.

  19. Homoleptic nickel(II) complexes of redox-tunable pincer-type ligands.

    PubMed

    Hewage, Jeewantha S; Wanniarachchi, Sarath; Morin, Tyler J; Liddle, Brendan J; Banaszynski, Megan; Lindeman, Sergey V; Bennett, Brian; Gardinier, James R

    2014-10-06

    Different synthetic methods have been developed to prepare eight new redox-active pincer-type ligands, H(X,Y), that have pyrazol-1-yl flanking donors attached to an ortho-position of each ring of a diarylamine anchor and that have different groups, X and Y, at the para-aryl positions. Together with four previously known H(X,Y) ligands, a series of 12 Ni(X,Y)2 complexes were prepared in high yields by a simple one-pot reaction. Six of the 12 derivatives were characterized by single-crystal X-ray diffraction, which showed tetragonally distorted hexacoordinate nickel(II) centers. The nickel(II) complexes exhibit two quasi-reversible one-electron oxidation waves in their cyclic voltammograms, with half-wave potentials that varied over a remarkable 700 mV range with the average of the Hammett σ(p) parameters of the para-aryl X, Y groups. The one- and two-electron oxidized derivatives [Ni(Me,Me)2](BF4)n (n = 1, 2) were prepared synthetically, were characterized by X-band EPR, electronic spectroscopy, and single-crystal X-ray diffraction (for n = 2), and were studied computationally by DFT methods. The dioxidized complex, [Ni(Me,Me)2](BF4)2, is an S = 2 species, with nickel(II) bound to two ligand radicals. The mono-oxidized complex [Ni(Me,Me)2](BF4), prepared by comproportionation, is best described as nickel(II) with one ligand centered radical. Neither the mono- nor the dioxidized derivative shows any substantial electronic coupling between the metal and their bound ligand radicals because of the orthogonal nature of their magnetic orbitals. On the other hand, weak electronic communication occurs between ligands in the mono-oxidized complex as evident from the intervalence charge transfer (IVCT) transition found in the near-IR absorption spectrum. Band shape analysis of the IVCT transition allowed comparisons of the strength of the electronic interaction with that in the related, previously known, Robin-Day class II mixed valence complex, [Ga(Me,Me)2](2+).

  20. Mössbauer effect study of iron(III) inidazolidine nitroxyl-free radical ligand complex

    NASA Astrophysics Data System (ADS)

    Mulaba, A.; Kiremire, E.; Pollak, H.; Boeyens, J.

    1999-09-01

    A new complex, [Fe(acac)L2], bearing inidazolidine nitroxyl-free radical ligand (L-) was recently synthesised for biological studies. It proved to be biologically active against African sleeping sickness, plasmodium falciparum (malaria), leishmaniasis and chaga disease causative agents. Three ESR well resolved peaks indicated the presence of a free (unpaired) and chemically active electron in the complex. The structural complex ferric iron was found at the centre of two electric gradient whose the biggest is suggested to be initiated by the unpaired charge. No distinction between different cis isomers could be made.

  1. Cytotoxicity and DNA interactions of some platinum(II) complexes with substituted benzimidazole ligands.

    PubMed

    Ozçelik, Azime Berna; Utku, Semra; Gümüş, Fatma; Keskin, Ayten Çelebi; Açık, Leyla; Yılmaz, Sükran; Ozgüngör, Adeviye

    2012-06-01

    In the present study, four Pt(II) complexes with 2-ethyl (1)/or benzyl (2)/or p-chlorobenzyl (3)/or 2-phenoxymethyl (4) benzimidazole carrier ligands were evaluated for their in vitro cytotoxic activities against the human HeLa cervix, oestrogen receptor-positive MCF-7 breast, and oestrogen receptor-negative MDA-MB 231 breast cancer cell lines. The plasmid DNA interactions and inhibition of the BamHI restriction enzyme activities of the complexes were also studied. Complex 3 was found to be more active than carboplatin for all examined cell lines and comparable with cisplatin, except for the HeLa cell line.

  2. Luminescent Cyclometalated Platinum Complexes with π-Bonded Catecholate Organometallic Ligands.

    PubMed

    Moussa, Jamal; Loch, Aruny; Chamoreau, Lise-Marie; Degli Esposti, Alessandra; Bandini, Elisa; Barbieri, Andrea; Amouri, Hani

    2017-02-20

    A series of cyclometalated platinum(II) complexes of the type [(ppy)Pt(LM)](n+) (n = 0, 1) with π-bonded catecholates acting as organometallic ligands (LM) have been prepared and characterized by analytical techniques. In addition, the structures of two complexes of the series were determined by single-crystal X-ray diffraction. The packing shows the formation of a 1D supramolecular assembly generated by dPt-πCp* interactions among individual units. All complexes are luminescent in the solid state and in solution media. The results of photophysics have been rationalized by means of density functional theory (DFT) and time-dependent DFT investigations.

  3. Synthesis, Characterization, and Antifungal Studies of Cr(III) Complex of Norfloxacin and Bipiridyl Ligand

    PubMed Central

    Debnath, Anamika; Hussain, Firasat; Masram, Dhanraj T.

    2014-01-01

    A novel slightly distorted octahedral complex of Cr(III) of norfloxacin (Nor) with the formula [CrIII(Nor)(Bipy)Cl2]Cl·2CH3OH has been synthesized hydrothermally in the presence of a N-containing heterocyclic compound 2,2′-bipyridyl (Bipy). The complex was characterized with FT-IR, elemental analysis, UV-visible spectroscopy, and X-ray crystallography. Spectral studies suggest that the Nor acts as a deprotonated bidentate ligand. Thermal studies were also carried out. The synthesised complex was screened against four fungi Pythium aphanidermatum (PA), Sclerotinia rolfsii (SR), Rhizoctonia solani (RS), and Rhizoctonia bataticola (RB). PMID:25276111

  4. Highly efficient electrochemiluminescence from iridium(III) complexes with 2-phenylquinoline ligand.

    PubMed

    Zhou, Yuyang; Li, Wanfei; Yu, Linpo; Liu, Yang; Wang, Xiaomei; Zhou, Ming

    2015-01-28

    A series of cyclometalated iridium(III) complexes with 2-phenylquinoline ligand (1-4) were designed and synthesized, which were thoroughly investigated by the photophysics, electrochemistry, theoretical calculations and electrochemiluminescence (ECL). By incorporating methyl groups into the 2-phenylquinoline, the corresponding complexes 2 and 3 displayed lower oxidative potential and higher HOMO energy levels. Most importantly, compared with tris(2,2'-bipyridyl)ruthenium(II) ([Ru(bipy)3](2+)), these iridium(III) complexes demonstrated more intense ECL in acetonitrile solutions.

  5. A diketiminate-bound diiron complex with a bridging carbonate ligand

    PubMed Central

    Sadique, Azwana R.; Brennessel, William W.; Holland, Patrick L.

    2009-01-01

    Reduction of carbon dioxide by a diiron(I) complex gives μ-carbonato-κ3 O:O′,O′′-bis­{[2,2,6,6-tetra­methyl-3,5-bis­(2,4,6-triisopropyl­phenyl)heptane-2,5-diiminate(1−)-κ2 N,N′]iron(II)} toluene disolvate, [Fe2(C41H65N)2(CO3)]·2C7H8, a diiron(II) species with a bridging carbonate ligand. The asymmetric unit contains one diiron complex and two cocrystallized toluene solvent mol­ecules that are distributed over three sites, one with atoms in general positions and two in crystallographic sites. Both FeII atoms are η2-coordinated to diketiminate ligands, but η1- and η2-coordinated to the bridging carbonate ligand. Thus, one FeII center is three-coordinate and the other is four-coordinate. The bridging carbonate ligand is nearly perpendicular to the iron–diketiminate plane of the four-coordinate FeII center and parallel to the plane of the three-coordinate FeII center. PMID:19407402

  6. Cu complexation by organic ligands in the sub-arctic NW Pacific and Bering Sea

    NASA Astrophysics Data System (ADS)

    Moffett, James W.; Dupont, Christopher

    2007-04-01

    Cu speciation was characterized at three stations in the sub arctic NW Pacific and Bering Sea using cathodic stripping voltammetry with the competing ligands benzoylacetone and salicylaldoxime. A single ligand model was fit to the titration data, yielding concentrations throughout the water column of ˜3-4 nM, and conditional stability constants ranging from 10 12.7 to 10 14.1, this range being partly due to the choice of competing ligand. Free Cu 2+ in surface waters was 2-4×10 -14 M, in close agreement with values reported by previous workers in the NE Pacific using anodic stripping voltammetry (ASV). However, those results showed that complexation by strong organic ligands becomes unimportant below 200-300 m, while our data indicated Cu is strongly complexed to depths as great as 3000 m. Free Cu 2+ concentrations in surface waters reported here and in previous work are close to the threshold value where Cu can limit the acquisition of Fe by phytoplankton.

  7. Tropolone Complexes Formed with Amphoteric Ligands: Structure and Dynamics as Viewed across the Vibronic Landscape

    NASA Astrophysics Data System (ADS)

    Nemchick, Deacon J.; Chew, Kathryn; Vaccaro, Patrick H.

    2013-06-01

    Owing to the presence of a finite potential barrier that adjoins hydroxylic (proton-donating) and ketonic (proton-accepting) oxygen atom centers, tropolone (TrOH) long has served as a model system for the investigation of coherent (symmetrical) proton-transfer events. Hydrogen-bound complexes formed by docking amphoteric species onto the TrOH substrate, such as those involving formic acid [TrOH-(FA)_n] and other simultaneous donor-acceptor ligands, have been generated under supersonic free-jet expansion conditions. For binary adducts (n=1), quantum-chemical calculations predict two nearly degenerate isomers that can be labeled as external (ligand attached to the seven-membered aromatic ring) and internal (ligand bound to the O-H \\cdot\\cdot\\cdot O reaction site), where the latter cleft-bound form offers the tantalizing possibility of undergoing a double proton-transfer process. A variety of spectroscopic probes build around the intense ˜{A}^{1}{B}_{2}-˜{X}^{1}{A}_{1} (π ^{*}←π) near-ultraviolet absorption feature of bare tropolone have been enlisted to elucidate the binding motifs and reaction pathways in complexes containing one or more amphoteric ligands, including vibrationally resolved schemes based upon laser-induced fluorescence (LIF), dispersed fluorescence (DF), and fluorescence hole-burning (FHB) methods. Structural and dynamical information gleaned from these experiments will be discussed in light of complementary ab initio calculations.

  8. Improving the LIE Method for Binding Free Energy Calculations of Protein-Ligand Complexes.

    PubMed

    Miranda, Williams E; Noskov, Sergei Yu; Valiente, Pedro A

    2015-09-28

    In this work, we introduced an improved linear interaction energy (LIE) method parameterization for computations of protein–ligand binding free energies. The protocol, coined LIE-D, builds on the linear relationship between the empirical coefficient γ in the standard LIE scheme and the D parameter, introduced in our work. The D-parameter encompasses the balance (difference) between electrostatic (polar) and van der Waals (nonpolar) energies in protein–ligand complexes. Leave-one-out cross-validation showed that LIE-D reproduced accurately the absolute binding free energies for our training set of protein–ligand complexes (<|error|> = 0.92 kcal/mol, SDerror = 0.66 kcal/mol, R(2) = 0.90, QLOO(2) = 0.89, and sPRESS(LOO) = 1.28 kcal/mol). We also demonstrated LIE-D robustness by predicting accurately the binding free energies for three different protein–ligand systems outside the training data set, where the electrostatic and van der Waals interaction energies were calculated with different force fields.

  9. Manipulating charge transfer excited state relaxation and spin crossover in iron coordination complexes with ligand substitution

    DOE PAGES

    Zhang, Wenkai; Kjaer, Kasper S.; Alonso-Mori, Roberto; ...

    2016-08-25

    Developing light-harvesting and photocatalytic molecules made with iron could provide a cost effective, scalable, and environmentally benign path for solar energy conversion. To date these developments have been limited by the sub-picosecond metal-to-ligand charge transfer (MLCT) electronic excited state lifetime of iron based complexes due to spin crossover – the extremely fast intersystem crossing and internal conversion to high spin metal-centered excited states. We revitalize a 30 year old synthetic strategy for extending the MLCT excited state lifetimes of iron complexes by making mixed ligand iron complexes with four cyanide (CN–) ligands and one 2,2'-bipyridine (bpy) ligand. This enables MLCTmore » excited state and metal-centered excited state energies to be manipulated with partial independence and provides a path to suppressing spin crossover. We have combined X-ray Free-Electron Laser (XFEL) Kβ hard X-ray fluorescence spectroscopy with femtosecond time-resolved UV-visible absorption spectroscopy to characterize the electronic excited state dynamics initiated by MLCT excitation of [Fe(CN)4(bpy)]2–. The two experimental techniques are highly complementary; the time-resolved UV-visible measurement probes allowed electronic transitions between valence states making it sensitive to ligand-centered electronic states such as MLCT states, whereas the Kβ fluorescence spectroscopy provides a sensitive measure of changes in the Fe spin state characteristic of metal-centered excited states. Here, we conclude that the MLCT excited state of [Fe(CN)4(bpy)]2– decays with roughly a 20 ps lifetime without undergoing spin crossover, exceeding the MLCT excited state lifetime of [Fe(2,2'-bipyridine)3]2+ by more than two orders of magnitude.« less

  10. [Classification and Contribution Analysis of Aromatic Clusters in Protein-Ligand Complexes].

    PubMed

    Yamasaki, Hiroyuki; Koseki, Jun; Nishibata, Yoshihiko; Hirono, Shuichi

    2016-01-01

      Intermolecular interactions are key features in the stabilization or destabilization of complexes. In particular, interactions involving aromatic rings have been extensively studied both theoretically and experimentally. Studies have shown that aromatic-aromatic interactions can be categorized by ring-ring orientation into a variety of different types, such as stacking interactions and T-shaped interactions. Because these different orientations affect stabilization, analyses of such interactions, for example ab initio molecular orbital calculations, are applied to pairs of aromatic rings, both in model systems and real systems. An important series of aromatic-aromatic interactions include those between pairs of aromatic residues in proteins. These residues have been studied computationally using both a theoretical chemistry approach and a knowledge-based analys. Protein 3D structural information is essential for knowledge-based studies of aromatic-aromatic interactions in protein-ligand complexes. Some databases filter entries from the Protein Data Bank (PDB) using criteria that make them suitable for computational approaches involving specific research targets. Lanzarotti et al. have shown that aromatic clusters in which three or more aromatic residues are in close proximity to each other are found in many protein structures, expanding pairwise aromatic-aromatic interactions. Moreover, these clusters are thought to be important in terms of protein function, structural stability and ligand recognition. Here, we show that aromatic clusters, as well as individual proteins, are found in a variety of protein-ligand complexes. As such, we anticipate that these clusters might have a significant role in ligand binding and could help in efficient ligand design.

  11. Manipulating charge transfer excited state relaxation and spin crossover in iron coordination complexes with ligand substitution

    SciTech Connect

    Zhang, Wenkai; Kjaer, Kasper S.; Alonso-Mori, Roberto; Bergmann, Uwe; Chollet, Matthieu; Fredin, Lisa A.; Hadt, Ryan G.; Hartsock, Robert W.; Harlang, Tobias; Kroll, Thomas; Kubicek, Katharina; Lemke, Henrik T.; Liang, Huiyang W.; Liu, Yizhu; Nielsen, Martin M.; Persson, Petter; Robinson, Joseph S.; Solomon, Edward I.; Sun, Zheng; Sokaras, Dimosthenis; van Driel, Tim B.; Weng, Tsu -Chien; Zhu, Diling; Warnmark, Kenneth; Sundstrom, Villy; Gaffney, Kelly J.

    2016-08-25

    Developing light-harvesting and photocatalytic molecules made with iron could provide a cost effective, scalable, and environmentally benign path for solar energy conversion. To date these developments have been limited by the sub-picosecond metal-to-ligand charge transfer (MLCT) electronic excited state lifetime of iron based complexes due to spin crossover – the extremely fast intersystem crossing and internal conversion to high spin metal-centered excited states. We revitalize a 30 year old synthetic strategy for extending the MLCT excited state lifetimes of iron complexes by making mixed ligand iron complexes with four cyanide (CN) ligands and one 2,2'-bipyridine (bpy) ligand. This enables MLCT excited state and metal-centered excited state energies to be manipulated with partial independence and provides a path to suppressing spin crossover. We have combined X-ray Free-Electron Laser (XFEL) Kβ hard X-ray fluorescence spectroscopy with femtosecond time-resolved UV-visible absorption spectroscopy to characterize the electronic excited state dynamics initiated by MLCT excitation of [Fe(CN)4(bpy)]2–. The two experimental techniques are highly complementary; the time-resolved UV-visible measurement probes allowed electronic transitions between valence states making it sensitive to ligand-centered electronic states such as MLCT states, whereas the Kβ fluorescence spectroscopy provides a sensitive measure of changes in the Fe spin state characteristic of metal-centered excited states. Here, we conclude that the MLCT excited state of [Fe(CN)4(bpy)]2– decays with roughly a 20 ps lifetime without undergoing spin crossover, exceeding the MLCT excited state lifetime of [Fe(2,2'-bipyridine)3]2+ by more than two orders of magnitude.

  12. Toward Functional Carboxylate-Bridged Diiron Protein Mimics: Achieving Structural Stability and Conformational Flexibility Using a Macrocylic Ligand Framework

    PubMed Central

    Do, Loi H.; Lippard, Stephen J.

    2011-01-01

    A dinucleating macrocycle, H2PIM, containing phenoxylimine metal-binding units has been prepared. Reaction of H2PIM with [Fe2(Mes)4] (Mes = 2,4,6-trimethylphenyl) and sterically hindered carboxylic acids, Ph3CCO2H or ArTolCO2H (2,6-bis(p-tolyl)benzoic acid), afforded complexes [Fe2(PIM)(Ph3CCO2)2] (1) and [Fe2(PIM)(ArTolCO2)2] (2), respectively. X-ray diffraction studies revealed that these diiron(II) complexes closely mimic the active site structures of the hydroxylase components of bacterial multi-component monooxygenases (BMMs), particularly the syn disposition of the nitrogen donor atoms and the bridging μ-η1η2 and μ-η1η1 modes of the carboxylate ligands at the diiron(II) centers. Cyclic voltammograms of 1 and 2 displayed quasi-reversible redox couples at +16 and +108 mV vs. ferrocene/ferrocenium, respectively. Treatment of 2 with silver perchlorate afforded a silver(I)/iron(III) heterodimetallic complex, [Fe2(μ-OH)2(ClO4)2(PIM)(ArTolCO2)Ag] (3), which was structurally and spectroscopically characterized. Complexes 1 and 2 both react rapidly with dioxygen. Oxygenation of 1 afforded a (μ-hydroxo)diiron(III) complex [Fe2(μ-OH)(PIM)(Ph3CCO2)3] (4), a hexa(μ-hydroxo)tetrairon(III) complex [Fe4(μ-OH)6(PIM)2(Ph3CCO2)2] (5), and an unidentified iron(III) species. Oxygenation of 2 exclusively formed di(carboxylato)diiron(III) compounds, a testimony to the role of the macrocylic ligand in preserving the dinuclear iron center under oxidizing conditions. X-ray crystallographic and 57Fe Mössbauer spectroscopic investigations indicated that 2 reacts with dioxygen to give a mixture of (μ-oxo)diiron(III) [Fe2(μ-O)(PIM)(ArTolCO2)2] (6) and di(μ-hydroxo)diiron(III) [Fe2(μ-OH)2(PIM)(ArTolCO2)2] (7) units in the same crystal lattice. Compounds 6 and 7 spontaneously convert to a tetrairon(III) complex, [Fe4(μ-OH)6(PIM)2(ArTolCO2)2] (8), when treated with excess H2O. PMID:21682286

  13. Copper(II/I) Complexes of a Hexakis(bipyridyl)cyclotriveratrylene Ligand: A Redox-Induced Conformational Switch.

    PubMed

    Wytko, Jennifer A.; Boudon, Corinne; Weiss, Jean; Gross, Maurice

    1996-07-17

    A series of copper(II) and copper(I) complexes have been synthesized with ligands combining 6-methyl-2,2'-bipyridines with cyclotriveratrylene (CTV) (1) and with catechol (2). The electrochemical, (1)H NMR, and mass spectrometry characterizations of these complexes are described and discussed. The six pendant bipyridines of ligand 1 allow for the formation of two trinuclear copper(I) complexes [(1)Cu(3)](BF(4))(3) differing only in the conformation "vic" or "int" adopted by the ligand to fit the tetrahedral cuprous ions. Similarly, 1 generates two trinuclear copper(II) complexes in which the conformation of the ligand fits the square planar geometry of cupric ions. In both the cuprous and cupric complexes, a conformational equilibrium exists. Ligand 2 bearing two methylbipyridines has proven to be a useful model of the coordinating sites of ligand 1. In this case, two homologous copper(I) complexes are obtained, [(2)Cu]BF(4) and [(2)(2)Cu(2)](BF(4))(2), modeling respectively two possible coordination conformations of ligand 1. With copper(II), ligand 2 yields only one complex [(2)Cu](CF(3)SO(3))(2), which allows for the unambiguous identification of the conformations observed for ligand 1 complexes. The different coordinating modes of ligand 1 in the complexes mentioned are in exchange but exhibit different physical properties, thus representing a new bistable system based on conformational isomerism which exhibits an electrochemical potential hysteresis. An equilibrium constant and thermodynamic data were obtained for this system by variable-temperature cyclic voltammetry. The influence of coordinating vs noncoordinating solvents was also studied.

  14. Square-planar ruthenium(II) complexes: control of spin state by pincer ligand functionalization.

    PubMed

    Askevold, Bjorn; Khusniyarov, Marat M; Kroener, Wolfgang; Gieb, Klaus; Müller, Paul; Herdtweck, Eberhardt; Heinemann, Frank W; Diefenbach, Martin; Holthausen, Max C; Vieru, Veacheslav; Chibotaru, Liviu F; Schneider, Sven

    2015-01-07

    Functionalization of the PNP pincer ligand backbone allows for a comparison of the dialkyl amido, vinyl alkyl amido, and divinyl amido ruthenium(II) pincer complex series [RuCl{N(CH2 CH2 PtBu2 )2 }], [RuCl{N(CHCHPtBu2 )(CH2 CH2 PtBu2 )}], and [RuCl{N(CHCHPtBu2 )2 }], in which the ruthenium(II) ions are in the extremely rare square-planar coordination geometry. Whereas the dialkylamido complex adopts an electronic singlet (S=0) ground state and energetically low-lying triplet (S=1) state, the vinyl alkyl amido and the divinyl amido complexes exhibit unusual triplet (S=1) ground states as confirmed by experimental and computational examination. However, essentially non-magnetic ground states arise for the two intermediate-spin complexes owing to unusually large zero-field splitting (D>+200 cm(-1) ). The change in ground state electronic configuration is attributed to tailored pincer ligand-to-metal π-donation within the PNP ligand series.

  15. Design of vanadium mixed-ligand complexes as potential anti-protozoa agents.

    PubMed

    Benítez, Julio; Guggeri, Lucía; Tomaz, Isabel; Arrambide, Gabriel; Navarro, Maribel; Pessoa, João Costa; Garat, Beatriz; Gambino, Dinorah

    2009-04-01

    In the search for new therapeutic tools against Chagas' disease (American Trypanosomiasis) four novel mixed-ligand vanadyl complexes, [V(IV)O(L(2)-2H)(L(1))], including a bidentate polypyridyl DNA intercalator (L(1)) and a tridentate salycylaldehyde semicarbazone derivative (L(2)) as ligands were synthesized, characterized by a combination of techniques, and in vitro evaluated. EPR suggest a distorted octahedral geometry with the tridentate semicarbazone occupying three equatorial positions and the polypyridyl ligand coordinated in an equatorial/axial mode. Both complexes including dipyrido[3,2-a: 2',3'-c]phenazine (dppz) as polypyridyl coligand showed IC(50) values in the muM range against Dm28c strain (epimastigotes) of Trypanosoma cruzi, causative agent of the disease, being as active as the anti-trypanosomal reference drug Nifurtimox. To get an insight into the trypanocidal mechanism of action of these compounds, DNA was evaluated as a potential parasite target and EPR, and (51)V NMR experiments were also carried out upon aging aerated solutions of the complexes. Data obtained by electrophoretic analysis suggest that the mechanism of action of these complexes could include DNA interactions.

  16. Formation of peptide radical ions through dissociative electron transfer in ternary metal-ligand-peptide complexes.

    PubMed

    Chu, Ivan K; Laskin, Julia

    2011-01-01

    The formation and fragmentation of odd-electron ions of peptides and proteins is of interest to applications in biological mass spectrometry. Gas-phase redox chemistry occurring during collision-induced dissociation of ternary metal-ligand-peptide complexes enables the formation of a variety of peptide radicals, including the canonical radical cations, M(+•), radical dications, [M+H](2+•), radical anions, [M-2H](-•) and phosphorylated radical cations. In addition, odd-electron peptide ions with well-defined initial location of the radical site are produced through side-chain losses from the radical ions. Subsequent fragmentation of these species provides information regarding the role of charge and location of the radical site on the competition between radical-induced and proton-driven fragmentation of odd-electron peptide ions. This account summarizes current understanding of the factors that control the efficiency of the intramolecular electron transfer (ET) in ternary metal-ligand-peptide complexes resulting in formation of odd-electron peptide ions. Specifically, we discuss the effect of the metal center, the ligand and the peptide structure on the competition between the ET, proton transfer (PT) and loss of neutral peptide and neutral peptide fragments from the complex. Fundamental studies of the structures, stabilities and the energetics and dynamics of fragmentation of these complexes are also important for detailed molecular-level understanding of photosynthesis and respiration in biological systems.

  17. Ruthenium complexes with chiral tetradentate PNNP ligands: asymmetric catalysis from the viewpoint of inorganic chemistry.

    PubMed

    Mezzetti, Antonio

    2010-09-14

    This is a personal account of the application of ruthenium complexes containing chiral tetradentate ligands with a P(2)N(2) ligand set (PNNP) as catalyst precursors for enantioselective "atom transfer" reactions. Therewith are meant reactions that involve bond formation between a metal-coordinated molecule and a free reagent. The reactive fragment (e.g. carbene) is transferred either from the metal to the non-coordinated substrate (e.g. olefin) or from the free reagent (e.g. F(+)) to the metal-bound substrate (e.g.beta-ketoester), depending on the class of catalyst (monocationic, Class A; or dicationic, Class B). The monocationic five-coordinate species [RuCl(PNNP)](+) and the six-coordinate complexes [RuCl(L)(PNNP)](+) (L = Et(2)O, H(2)O) of Class A catalyse asymmetric epoxidation, cyclopropanation (carbene transfer from the metal to the free olefin), and imine aziridination. Alternatively, the dicationic complexes [Ru(L-L)(PNNP)](2+) (Class B), which contain substrates that act as neutral bidentate ligands L-L (e.g., beta-ketoesters), catalyse Michael addition, electrophilic fluorination, and hydroxylation reactions. Additionally, unsaturated beta-ketoesters form dicationic complexes of Class B that catalyse Diels-Alder reactions with acyclic dienes to produce tetrahydro-1-indanones and estrone derivatives. Excellent enantioselectivity has been achieved in several of the catalytic reactions mentioned above. The study of key reaction intermediates (both in the solid state and in solution) has revealed significant mechanistic aspects of the catalytic reactions.

  18. Vibrational Spectroscopy of Mass Selected [UO2(ligand)n]2+ Complexes in the Gas Phase

    SciTech Connect

    Gary S. Groenewold; Anita Gianotto; Michael Vanstipdonk; Kevin C. Cossel; David T. Moore,; Nick Polfer; Jos Oomens

    2006-03-01

    The gas-phase infrared spectra of discrete uranyl ([UO2]2+) complexes ligated with acetone and/or acetonitrile were used to evaluate systematic trends of ligation on the position of the O=U=O stretch, and to enable rigorous comparison with the results of computational studies. Ionic uranyl complexes isolated in a Fourier transform ion cyclotron resonance mass spectrometer were fragmented via infrared multiphoton dissociation using a free electron laser scanned over the mid-IR wavelengths. The asymmetric O=U=O stretching frequency was measured at 1017 cm-1 for [UO2(CH3COCH3)2]2+, and was systematically red shifted to 1000 and 988 cm-1 by the addition of a third and fourth acetone ligands, respectively, which was consistent with more donation of electron density to the uranium center in complexes with higher coordination number. The experimental measurements were in good agreement with values generated computationally using LDA, B3LYP, and ZORA-PW91 approaches. In contrast to the uranyl frequency shifts, the carbonyl frequencies of the acetone ligands were progressively blue shifted as the number of ligands increased from 2 to 4, and approached that of free acetone. This observation was consistent with the formation of weaker noncovalent bonds between uranium and the carbonyl oxygen as the extent of ligation increases. Similar trends were observed for [UO2(CH3CN)n]2+ complexes although the magnitude of the red shift in the uranyl frequency upon addition more acetonitrile ligands was smaller than for acetone, consistent with the more modest nucleophilic nature of acetonitrile. This conclusion was amplified by the uranyl stretching frequencies measured for mixed acetone/acetonitrile complexes, which showed that substitution of one acetone for one acetonitrile produced a modest red shift of 3 to 6 cm-1.

  19. Crystallographic Complexes of Surfactant Protein A and Carbohydrates Reveal Ligand-induced Conformational Change*

    PubMed Central

    Shang, Feifei; Rynkiewicz, Michael J.; McCormack, Francis X.; Wu, Huixing; Cafarella, Tanya M.; Head, James F.; Seaton, Barbara A.

    2011-01-01

    Surfactant protein A (SP-A), a C-type lectin, plays an important role in innate lung host defense against inhaled pathogens. Crystallographic SP-A·ligand complexes have not been reported to date, limiting available molecular information about SP-A interactions with microbial surface components. This study describes crystal structures of calcium-dependent complexes of the C-terminal neck and carbohydrate recognition domain of SP-A with d-mannose, d-α-methylmannose, and glycerol, which represent subdomains of glycans on pathogen surfaces. Comparison of these complexes with the unliganded SP-A neck and carbohydrate recognition domain revealed an unexpected ligand-associated conformational change in the loop region surrounding the lectin site, one not previously reported for the lectin homologs SP-D and mannan-binding lectin. The net result of the conformational change is that the SP-A lectin site and the surrounding loop region become more compact. The Glu-202 side chain of unliganded SP-A extends out into the solvent and away from the calcium ion; however, in the complexes, the Glu-202 side chain translocates 12.8 Å to bind the calcium. The availability of Glu-202, together with positional changes involving water molecules, creates a more favorable hydrogen bonding environment for carbohydrate ligands. The Lys-203 side chain reorients as well, extending outward into the solvent in the complexes, thereby opening up a small cation-friendly cavity occupied by a sodium ion. Binding of this cation brings the large loop, which forms one wall of the lectin site, and the adjacent small loop closer together. The ability to undergo conformational changes may help SP-A adapt to different ligand classes, including microbial glycolipids and surfactant lipids. PMID:21047777

  20. Synthesis and Antiproliferative Activity of New Ruthenium Complexes with Ethacrynic-Acid-Modified Pyridine and Triphenylphosphine Ligands.

    PubMed

    Agonigi, Gabriele; Riedel, Tina; Zacchini, Stefano; Păunescu, Emilia; Pampaloni, Guido; Bartalucci, Niccolò; Dyson, Paul J; Marchetti, Fabio

    2015-07-06

    Pyridine- and phosphine-based ligands modified with ethacrynic acid (a broad acting glutathione transferase inhibitor) were prepared and coordinated to ruthenium(II)-arene complexes and to a ruthenium(III) NAMI-A type complex. All the compounds (ligands and complexes) were fully characterized by analytical and spectroscopic methods and, in one case, by single-crystal X-ray diffraction. The in vitro anticancer activity of the compounds was studied, with the compounds displaying moderate cytotoxicity toward the human ovarian cancer cell lines. All the complexes led to similar levels of residual GST activity in the different cell lines, irrespective of the stability of the Ru-ligand bond.

  1. Electronic structure of thioether containing NSNO donor azo-ligand and its copper(II) complex: Experimental and theoretical studies

    NASA Astrophysics Data System (ADS)

    Pramanik, Ajoy Kumar; Sarkar, Deblina; Mondal, Tapan Kumar

    2015-11-01

    Synthesis of thioether containing NSNO donor azo ligand (HL) showing hydrazoketo and azoenol tautomerism has been performed. The hydrazoketo and azoenol equilibrium of HL has been studied. The hydrazoketo form of HL is predominating over azoenol form. In copper(II) complex the ligand is present in azoenol form. The electronic spectra and electronic structure of the complex has been extensively studied. The structures of the ligand and copper(II) complex have been established from single crystal X-ray studies. The 1-D supramolecular structure of the complex is formed by π-π interactions.

  2. Synthesis, spectroscopic, coordination and biological activities of some organometallic complexes derived from thio-Schiff base ligands

    PubMed Central

    Abou-Hussein, Azza A.; Linert, Wolfgang

    2014-01-01

    Two series of mono- and binuclear complexes cyclic or acyclic thio-ferocine Schiff base ligands, derived from the condensation of 2-aminobenzenthiol (L) with monoacetyl ferrocene in the molar ratio 1:1 or in the molar ratio 1:2 for diacetyl ferocine have been prepared. The condensation reactions yield the corresponding Schiff Base ligands, HLa-Maf and H2Lb-Daf. The chelation of the ligands to metal ions occurs through the sulfur of the thiol group as well as the nitrogen atoms of the azomethine group of the ligands. HLa-Maf acts as monobasic bidentate or dibasic tetradentate, while H2Lb-Daf behaves as twice negatively cargend tetradentate ligand. The structures of these ligands were elucidated by elemental analysis, infrared, ultraviolet–visible spectra, as well as 1H NMR spectra. Reactions of the Schiff bases ligands with ruthenium(III), oxovanadium(IV) and dioxouranium(VI) afforded the corresponding transition metal complexes. The properties of the newly prepared complexes were analyse by elemental analyses, infrared, electronic spectra, 1H NMR as well as the magnetic susceptibility and conductivity measurement. The metal complexes exhibits different geometrical arrangements such as octahedral and square pyramidal coordination. Schiff base ligands and their metal complexes were tested against two pathogenic bacteria as Gram-positive and Gram-negative bacteria as well as one kind of fungi to study their biological activity. All the complexes exhibit antibacterial and antifungal activities against these organisms. PMID:24070648

  3. Synthesis, spectroscopic, coordination and biological activities of some organometallic complexes derived from thio-Schiff base ligands

    NASA Astrophysics Data System (ADS)

    Abou-Hussein, Azza A.; Linert, Wolfgang

    2014-01-01

    Two series of mono- and binuclear complexes cyclic or acyclic thio-ferocine Schiff base ligands, derived from the condensation of 2-aminobenzenthiol (L) with monoacetyl ferrocene in the molar ratio 1:1 or in the molar ratio 1:2 for diacetyl ferocine have been prepared. The condensation reactions yield the corresponding Schiff Base ligands, HLa-Maf and H2Lb-Daf. The chelation of the ligands to metal ions occurs through the sulfur of the thiol group as well as the nitrogen atoms of the azomethine group of the ligands. HLa-Maf acts as monobasic bidentate or dibasic tetradentate, while H2Lb-Daf behaves as twice negatively cargend tetradentate ligand. The structures of these ligands were elucidated by elemental analysis, infrared, ultraviolet-visible spectra, as well as 1H NMR spectra. Reactions of the Schiff bases ligands with ruthenium(III), oxovanadium(IV) and dioxouranium(VI) afforded the corresponding transition metal complexes. The properties of the newly prepared complexes were analyse by elemental analyses, infrared, electronic spectra, 1H NMR as well as the magnetic susceptibility and conductivity measurement. The metal complexes exhibits different geometrical arrangements such as octahedral and square pyramidal coordination. Schiff base ligands and their metal complexes were tested against two pathogenic bacteria as Gram-positive and Gram-negative bacteria as well as one kind of fungi to study their biological activity. All the complexes exhibit antibacterial and antifungal activities against these organisms.

  4. Unusually efficient pyridine photodissociation from Ru(II) complexes with sterically bulky bidentate ancillary ligands.

    PubMed

    Knoll, Jessica D; Albani, Bryan A; Durr, Christopher B; Turro, Claudia

    2014-11-13

    The introduction of steric bulk to the bidentate ligand in [Ru(tpy)(bpy)(py)](2+) (1; tpy = 2,2':2',6″-terpyridine; bpy = 2,2'-bipyridine; py = pyridine) to provide [Ru(tpy)(Me2bpy)(py)](2+) (2; Me2bpy = 6,6'-dimethyl-2,2'-bipyridine) and [Ru(tpy)(biq)(py)](2+) (3; biq = 2,2'-biquinoline) facilitates photoinduced dissociation of pyridine with visible light. Upon irradiation of 2 and 3 in CH3CN (λirr = 500 nm), ligand exchange occurs to produce the corresponding [Ru(tpy)(NN)(NCCH3)](2+) (NN = Me2bpy, biq) complex with quantum yields, Φ500, of 0.16(1) and 0.033(1) for 2 and 3, respectively. These values represent an increase in efficiency of the reaction by 2-3 orders of magnitude as compared to that of 1, Φ500 < 0.0001, under similar experimental conditions. The photolysis of 2 and 3 in H2O with low energy light to produce [Ru(tpy)(NN)(OH2)](2+) (NN = Me2bpy, biq) also proceeds rapidly (λirr > 590 nm). Complexes 1-3 are stable in the dark in both CH3CN and H2O under similar experimental conditions. X-ray crystal structures and theoretical calculations highlight significant distortion of the planes of the bidentate ligands in 2 and 3 relative to that of 1. The crystallographic dihedral angles defined by the bidentate ligand, Me2bpy in 2 and biq in 3, and the tpy ligand were determined to be 67.87° and 61.89°, respectively, whereas only a small distortion from the octahedral geometry is observed between bpy and tpy in 1, 83.34°. The steric bulk afforded by Me2bpy and biq also result in major distortions of the pyridine ligand in 2 and 3, respectively, relative to 1, which are believed to weaken its σ-bonding and π-back-bonding to the metal and play a crucial role in the efficiency of the photoinduced ligand exchange. The ability of 2 and 3 to undergo ligand exchange with λirr > 590 nm makes them potential candidates to build photochemotherapeutic agents for the delivery of drugs with pyridine binding groups.

  5. Unusually Efficient Pyridine Photodissociation from Ru(II) Complexes with Sterically Bulky Bidentate Ancillary Ligands

    PubMed Central

    2015-01-01

    The introduction of steric bulk to the bidentate ligand in [Ru(tpy)(bpy)(py)]2+ (1; tpy = 2,2′:2′,6″-terpyridine; bpy = 2,2′-bipyridine; py = pyridine) to provide [Ru(tpy)(Me2bpy)(py)]2+ (2; Me2bpy = 6,6′-dimethyl-2,2′-bipyridine) and [Ru(tpy)(biq)(py)]2+ (3; biq = 2,2′-biquinoline) facilitates photoinduced dissociation of pyridine with visible light. Upon irradiation of 2 and 3 in CH3CN (λirr = 500 nm), ligand exchange occurs to produce the corresponding [Ru(tpy)(NN)(NCCH3)]2+ (NN = Me2bpy, biq) complex with quantum yields, Φ500, of 0.16(1) and 0.033(1) for 2 and 3, respectively. These values represent an increase in efficiency of the reaction by 2–3 orders of magnitude as compared to that of 1, Φ500 < 0.0001, under similar experimental conditions. The photolysis of 2 and 3 in H2O with low energy light to produce [Ru(tpy)(NN)(OH2)]2+ (NN = Me2bpy, biq) also proceeds rapidly (λirr > 590 nm). Complexes 1–3 are stable in the dark in both CH3CN and H2O under similar experimental conditions. X-ray crystal structures and theoretical calculations highlight significant distortion of the planes of the bidentate ligands in 2 and 3 relative to that of 1. The crystallographic dihedral angles defined by the bidentate ligand, Me2bpy in 2 and biq in 3, and the tpy ligand were determined to be 67.87° and 61.89°, respectively, whereas only a small distortion from the octahedral geometry is observed between bpy and tpy in 1, 83.34°. The steric bulk afforded by Me2bpy and biq also result in major distortions of the pyridine ligand in 2 and 3, respectively, relative to 1, which are believed to weaken its σ-bonding and π-back-bonding to the metal and play a crucial role in the efficiency of the photoinduced ligand exchange. The ability of 2 and 3 to undergo ligand exchange with λirr > 590 nm makes them potential candidates to build photochemotherapeutic agents for the delivery of drugs with pyridine binding groups. PMID:25027458

  6. New metal complexes of N3 tridentate ligand: Synthesis, spectral studies and biological activity

    NASA Astrophysics Data System (ADS)

    Al-Hamdani, Abbas Ali Salih; Al Zoubi, Wail

    2015-02-01

    New tridentate ligand 3-amino-4-{1,5-dimethyl-3-[2-(5-methyl-1H-indol-3-yl)-ethylimino]-2phenyl-2,3-dihydro-1H-pyrazol-4-ylazo}-phenol L was synthesized from the reaction of 1,5-dimethyl-3-[2-(5-methyl-1H-indol-3-yl)-ethylimino]-2-phenyl-2,3-dihydro-1H-pyrazol-4-ylamine and 3.4-amino phenol. A complexes of these ligand [Ni(II)(L)(H2O)2 Cl]Cl, [pt(IV)(L)Cl3]Cl and [M(II)(L)Cl]Cl (M = Pd (II), Zn (II), Cd (II) and Hg (II) were synthesized. The complexes were characterized by spectroscopic methods and magnetic moment measurements, elemental analysis, metal content, Chloride containing and conductance. These studies revealed octahedral geometries for the Ni (II), pt (IV) complexes, square planar for Pd (II) complex and tetrahedral for the Zn (II), Cd(II) and Hg (II) complexes. The study of complexes formation via molar ratio and job method in DMF solution has been investigated and results were consistent to those found in the solid complexes with a ratio of (M:L) as (1:1). The thermodynamic parameters, such as ΔE*, ΔH*, ΔS* ΔG* and K are calculated from the TGA curve using Coats-Redfern method. Hyper Chem-8 program has been used to predict structural geometries of compounds in gas phase. The synthesized ligand and its metal complexes were screened for their biological activity against bacterial species, two Gram positive bacteria (Bacillus subtilis and Staphylococcus aureus) and two Gram negative bacteria (Escherichia coli and Pseudomonasaeruginosa).

  7. Tunable transition metal-ligand complexation for enhanced elucidation of flavonoid diglycosides by electrospray ionization mass spectrometry.

    PubMed

    Pikulski, Michael; Aguilar, Apolonio; Brodbelt, Jennifer S

    2007-03-01

    A tunable ESI-MS/MS strategy for differentiation of flavone and flavanone diglycoside isomers based on metal complexation with auxiliary ligands is reported. The addition of a metal salt and an auxiliary ligand to a flavonoid solution results in the formation of [M(II) (flavonoid-H) auxiliary ligand](+) complexes, where M(II) is a transition metal. A series of auxiliary ligands with electron-withdrawing substituents were synthesized to tailor the relative metal binding affinities of the ligands and thus directly influence the stabilities, and consequently the dissociation pathways, of the complexes. Upon collisionally activated dissociation, the complexes yield fragmentation patterns in which the abundances of key diagnostic ions are enhanced, thus facilitating isomer differentiation.

  8. Synthesis, characterization and luminescent properties of new highly luminescent organic ligand and complexes of trivalent rare earth.

    PubMed

    Xi, Peng; Gu, XiaoHua; Chen, CaoFeng; He, YuXian; Huang, XiangAn

    2007-03-01

    A novel ligand with two carboxylic groups has been synthesized. The composition and structure of the ligand were characterized by IR, (1)H NMR and MS spectrometry. The highly luminescent intensity complexes were prepared with the ligand and phen. The IR, solid state (13)C NMR and fluorescent spectra of the complex were studied. IR absorption spectra indicate that the ligand is coordinated to the Eu(3+) ion, and chemical bonds are formed between Eu(3+) ion and nitrogen atoms of phen. The fluorescent spectra illustrate that the complex has an excellent luminescence, indicating the ligand favors energy transfer to the emitting energy level of Eu(3+). The influences of pH and reaction solvent on the fluorescence intensity of the complex were also discussed.

  9. NMR resonance assignments for the tetramethylrhodamine binding RNA aptamer 3 in complex with the ligand 5-carboxy-tetramethylrhodamine.

    PubMed

    Duchardt-Ferner, Elke; Juen, Michael; Kreutz, Christoph; Wöhnert, Jens

    2017-04-01

    RNA aptamers are used in a wide range of biotechnological or biomedical applications. In many cases the high resolution structures of these aptamers in their ligand-complexes have revealed fundamental aspects of RNA folding and RNA small molecule interactions. Fluorescent RNA-ligand complexes in particular find applications as optical sensors or as endogenous fluorescent tags for RNA tracking in vivo. Structures of RNA aptamers and aptamer ligand complexes constitute the starting point for rational function directed optimization approaches. Here, we present the NMR resonance assignment of an RNA aptamer binding to the fluorescent ligand tetramethylrhodamine (TMR) in complex with the ligand 5-carboxy-tetramethylrhodamine (5-TAMRA) as a starting point for a high-resolution structure determination using NMR spectroscopy in solution.

  10. Effect of doping of calcium fluoride nanoparticles on the photoluminescence properties of europium complexes with benzoic acid derivatives as secondary ligands and 2-aminopyridine as primary ligand

    NASA Astrophysics Data System (ADS)

    Sharma, Garima; Narula, Anudeep Kumar

    2015-08-01

    The present article reports the synthesis of three Eu(III) complexes [Eu(BA)3(2-ap)] (1), [Eu(HBA)3(2-ap)] (2) and [Eu(ABA)3(2-ap)] (3) (BA = benzoic acid, HBA = 2-hydroxy benzoic acid, ABA = 2-amino benzoic acid and 2-ap = 2-aminopyridine) carried out in ethanol solution. The complexes were further doped with CaF2 nanoparticles and a change in the photoluminescence properties was observed. The compositions and structural investigation of the complexes were determined by elemental analysis and Fourier transform infrared spectroscopy (FTIR) which suggest the coordination of ligands with the central Eu(III) ion. The optical properties of the complexes were studied by Ultraviolet Visible absorption spectroscopy (UV-Vis) and photoluminescence studies (PL). The relative PL intensity was enhanced in the Eu(III) complexes doped with CaF2 nanoparticles as compared to the pure Eu(III) complexes, however the increase in intensity varied in the order of ligands ABA > HBA > BA. The photoluminescence lifetime decay curves also revealed the longer lifetime (τ) and higher quantum efficiency (η) for europium complexes with ABA ligands suggesting the efficient energy transfer and better sensitizing ability of the ligand to europium ion. The morphology of the synthesized compounds were studied by Scanning Electron Microscopy (SEM) revealing spherical morphology with agglomeration of the nanoparticles.

  11. Estimation of affinities of ligands in mixtures via magnetic recovery of target-ligand complexes and chromatographic analyses: chemometrics and an experimental model

    PubMed Central

    2011-01-01

    Abstract Background The combinatorial library strategy of using multiple candidate ligands in mixtures as library members is ideal in terms of cost and efficiency, but needs special screening methods to estimate the affinities of candidate ligands in such mixtures. Herein, a new method to screen candidate ligands present in unknown molar quantities in mixtures was investigated. Results The proposed method involves preparing a processed-mixture-for-screening (PMFS) with each mixture sample and an exogenous reference ligand, initiating competitive binding among ligands from the PMFS to a target immobilized on magnetic particles, recovering target-ligand complexes in equilibrium by magnetic force, extracting and concentrating bound ligands, and analyzing ligands in the PMFS and the concentrated extract by chromatography. The relative affinity of each candidate ligand to its reference ligand is estimated via an approximation equation assuming (a) the candidate ligand and its reference ligand bind to the same site(s) on the target, (b) their chromatographic peak areas are over five times their intercepts of linear response but within their linear ranges, (c) their binding ratios are below 10%. These prerequisites are met by optimizing primarily the quantity of the target used and the PMFS composition ratio. The new method was tested using the competitive binding of biotin derivatives from mixtures to streptavidin immobilized on magnetic particles as a model. Each mixture sample containing a limited number of candidate biotin derivatives with moderate differences in their molar quantities were prepared via parallel-combinatorial-synthesis (PCS) without purification, or via the pooling of individual compounds. Some purified biotin derivatives were used as reference ligands. This method showed resistance to variations in chromatographic quantification sensitivity and concentration ratios; optimized conditions to validate the approximation equation could be applied to

  12. The effect of wastewater effluent derived ligands on copper and zinc complexation.

    PubMed

    Constantino, C; Comber, S D W; Scrimshaw, M D

    2017-03-01

    The shift toward bioavailability-based standards for metals such as copper and zinc not only improves the ecological relevance of the standard but also introduces significant complexity into assessing compliance. This study examined differences in the copper and zinc complexation characteristics of effluents from a range of different sewage treatment works and in relation to so-called 'natural' samples. This information is essential to determine whether the inclusion of effluent-specific complexation characteristics within the regulatory framework could enhance the environmental relevance of compliance criteria. The data show that for copper, binding affinity was not greater than that measured for materials derived from the receiving water environment, with a mean log K of between 4.4 and 5.15 and mean complexation capacity ranging from 38 to 120 μg/mg dissolved organic carbon (DOC) for effluents compared with a log K of 5.6 and complexation capacity of 37 μg/mg DOC for the Suwannee River fulvic acid. For zinc, however, effluents exhibited a much higher complexation capacity, with effluent means ranging from 3 to 23 μg/mg DOC compared with the Suwannee River fulvic acid, for which the complexation capacity could not be determined. Synthetic ligands in sewage effluent, such as ethylenediaminetetraacetic acid (EDTA), are implicated as contributing to these observed differences. This suggests that the current biotic ligand models for zinc might overstate the risk of harm in effluent-impacted waters. The data also show that the copper and zinc complexation characteristics of effluent samples obtained from the same sewage treatment works were less different from one another than those of effluents from other treatment works and therefore that sewage source has an important influence on complexation characteristics. The findings from this study support the case that the contribution to complexation from effluent-derived ligands could enhance the environmental

  13. New ruthenium nitrosyl pincer complexes bearing an O2 ligand. Mono-oxygen transfer.

    PubMed

    Fogler, Eran; Efremenko, Irena; Gargir, Moti; Leitus, Gregory; Diskin-Posner, Yael; Ben-David, Yehoshoa; Martin, Jan M L; Milstein, David

    2015-03-02

    We report on Ru((II))(μ(2)-O2) nitrosyl pincer complexes that can return to their original Ru(0) state by reaction with mono-oxygen scavengers. Potential intermediates were calculated by density functional theory (DFT) and a mechanism is proposed, revealing a new type of metal-ligand cooperation consisting of activation of the O2 moiety by both the metal center and the NO ligand. Reaction of the Ru(0) nitrosyl complex 1 with O2 quantitatively yielded the crystallographically characterized Ru((II)) (μ(2)-O2) nitrosyl complex 2. Reaction of 2 with the mono-oxygen scavengers phosphines or CO gave the Ru(0) complex 1 and phosphine oxides, or the carbonyl complex 3 (1 trapped by CO) and CO2, respectively. Reaction of 2 with 1 equiv of phosphine at room temperature or -40 °C resulted in immediate formation of half an equivalent of 1 and 1 equiv of phosphine oxide, while half an equivalent of 2 remained unchanged. Overnight reaction at room temperature of 2 with excess CO (≥3 equiv) resulted in 3 and CO2 gas as the only products. Reaction of 1 with 1 equiv of mono-oxygen source (dioxirane) at -78 °C yielded the Ru((II))(μ(2)-O2) complex 2. Similarly, reaction of the Ru(0) dearomatized complex 4 with O2 led to the crystallographicaly characterized Ru((II))(μ(2)-O2) complex 5. Further reaction of 5 with mono-oxygen scavengers (phosphines or CO) led to the Ru(0) complex 4 and phosphine oxides or complex 6 (4 trapped by CO) and CO2. When instead only 1 equiv of 5 was reacted with 1 equiv of phosphine at room temperature, immediate formation of half an equivalent of 4 and 1 equiv of phosphine oxide took place, while half an equivalent of 5 remained unchanged. When 5 reacted with an excess of CO (≥3 equiv), complex 6 and CO2 gas were the only products obtained. DFT studies indicate a new mode of metal-ligand cooperation involving the nitrosyl ligand in the oxygen transfer process.

  14. Synthesis of vanadium(V) hydrazido complexes with tris(2-hydroxyphenyl)amine ligands.

    PubMed

    Moriuchi, Toshiyuki; Ikeuchi, Kousuke; Hirao, Toshikazu

    2013-09-07

    The reaction of the oxidovanadium(V) complexes with N,N-dimethylhydrazine was demonstrated to afford the corresponding vanadium(V) dimethylhydrazido complexes. The substituent at the 3-position of the tris(2-hydroxyphenyl)amine ligand was found to influence the electronic environment of the vanadium center. The crystal structure of the non-substituted vanadium(V) dimethylhydrazido complex exhibited a distorted trigonal bipyramidal geometry with phenolate oxygen atoms in equatorial positions and the near-linear V(1)-N(2)-N(3) angle. The vanadium(V) diphenylhydrazido complexes could be obtained by the reaction of the oxidovanadium(V) complexes with N,N-diphenylhydrazine. A distorted trigonal bipyramidal geometry with phenolate oxygen atoms in equatorial positions was also observed in the crystal structure of the non-substituted vanadium(V) diphenylhydrazido complex.

  15. Unique behaviour of dinitrogen-bridged dimolybdenum complexes bearing pincer ligand towards catalytic formation of ammonia

    PubMed Central

    Tanaka, Hiromasa; Arashiba, Kazuya; Kuriyama, Shogo; Sasada, Akira; Nakajima, Kazunari; Yoshizawa, Kazunari; Nishibayashi, Yoshiaki

    2014-01-01

    It is vital to design effective nitrogen fixation systems that operate under mild conditions, and to this end we recently reported an example of the catalytic formation of ammonia using a dinitrogen-bridged dimolybdenum complex bearing a pincer ligand, where up to twenty three equivalents of ammonia were produced based on the catalyst. Here we study the origin of the catalytic behaviour of the dinitrogen-bridged dimolybdenum complex bearing the pincer ligand with density functional theory calculations, based on stoichiometric and catalytic formation of ammonia from molecular dinitrogen under ambient conditions. Comparison of di- and mono-molybdenum systems shows that the dinitrogen-bridged dimolybdenum core structure plays a critical role in the protonation of the coordinated molecular dinitrogen in the catalytic cycle. PMID:24769530

  16. Synthesis and Properties of two CuI Complexes Involving Tetrathia-fulvalene-Fused Phenanthroline Ligand.

    PubMed

    Niu, Zhi-Gang; Wang, Xue-You; Chen, Hao-Hua; Wang, Xun; Wei, Sun; Wu, Dong-Min; Chen, Guang-Ying; Qin, Jie; Li, Gao-Nan

    2017-09-01

    Two CuI complexes based on the π-conjugated tetrathiafulvalene-annulated phenanthroline ligands (TTF-Phen, L1 and L2), [CuI(Xantphos)(L1)]BF4 (1, Xantphos = 9,9-dimethyl-4,5-bis(diphenylphosphino)xanthene) and [CuI(Binap)(L2)]BF4 (2, Binap = 2,2'-bis(diphenylphosphino)-1,1'-binaphthyl), have been synthesized. They have been fully characterized, and their photophysical and electrochemical properties are reported together with those of L1 and L2 for comparison. Both CuI complexes show metal-to-ligand charge transfer (MLCT) absorption bands, whereas the 3MLCT luminescence is strongly quenched.

  17. Communication: Free energy of ligand-receptor systems forming multimeric complexes

    NASA Astrophysics Data System (ADS)

    Di Michele, Lorenzo; Bachmann, Stephan J.; Parolini, Lucia; Mognetti, Bortolo M.

    2016-04-01

    Ligand-receptor interactions are ubiquitous in biology and have become popular in materials in view of their applications to programmable self-assembly. Although complex functionalities often emerge from the simultaneous interaction of more than just two linker molecules, state of the art theoretical frameworks enable the calculation of the free energy only in systems featuring one-to-one ligand/receptor binding. In this Communication, we derive a general formula to calculate the free energy of systems featuring simultaneous direct interaction between an arbitrary number of linkers. To exemplify the potential and generality of our approach, we apply it to the systems recently introduced by Parolini et al. [ACS Nano 10, 2392 (2016)] and Halverson and Tkachenko [J. Chem. Phys. 144, 094903 (2016)], both featuring functionalized Brownian particles interacting via three-linker complexes.

  18. Communication: Free energy of ligand-receptor systems forming multimeric complexes.

    PubMed

    Di Michele, Lorenzo; Bachmann, Stephan J; Parolini, Lucia; Mognetti, Bortolo M

    2016-04-28

    Ligand-receptor interactions are ubiquitous in biology and have become popular in materials in view of their applications to programmable self-assembly. Although complex functionalities often emerge from the simultaneous interaction of more than just two linker molecules, state of the art theoretical frameworks enable the calculation of the free energy only in systems featuring one-to-one ligand/receptor binding. In this Communication, we derive a general formula to calculate the free energy of systems featuring simultaneous direct interaction between an arbitrary number of linkers. To exemplify the potential and generality of our approach, we apply it to the systems recently introduced by Parolini et al. [ACS Nano 10, 2392 (2016)] and Halverson and Tkachenko [J. Chem. Phys. 144, 094903 (2016)], both featuring functionalized Brownian particles interacting via three-linker complexes.

  19. [Energetics of complex formation of the DNA hairpin structure d(GCGAAGC) with aromatic ligands].

    PubMed

    Kostiukov, V V

    2011-01-01

    The energy contributions of various physical interactions to the total Gibbs energy of complex formation of the biologically important DNA hairpin d(GCGAAGC) with aromatic antitumor antibiotics daunomycin and novantron and the mutagens ethidium and proflavine have been calculated. It has been shown that the relatively small value of the total energy of binding of the ligands to the hairpin is the sum of components great in absolute value and different in sign. The contributions of van der Waals interactions and both intra- and intermolecular hydrogen bonds and bonds with aqueous environment have been studied. According to the calculations, the hydrophobic and van der Waals components are energetically favorable in complex formation of the ligands with the DNA pairpin d(GCGAAGC), whereas the electrostatic (with consideration of hydrogen bonds) and entropic components are unfavorable.

  20. Synthesis and reactivity of palladium(II) fluoride complexes containing nitrogen-donor ligands.

    PubMed

    Ball, Nicholas D; Kampf, Jeff W; Sanford, Melanie S

    2010-01-14

    This article describes the synthesis, characterization, and reactivity of palladium(II) fluoride complexes containing sp(2) and sp(3) nitrogen-containing supporting ligands. Both cis and trans complexes of general structure (N)(N')Pd(II)(R)(F) (R = Ar or CH(3)) as well as cis-(N)(2)Pd(II)(F)(2) are reported. Crystallographic characterization of these molecules has allowed structural comparisons to related phosphine-ligated species. Furthermore, these studies have revealed that nitrogen-donor ligands support some of the longest and the shortest Pd-F bonds reported to date. The thermal decomposition of (N)(N')Pd(II)(R)(F) has also been examined, and no products of C-F bond-forming reductive elimination were obtained in any case.

  1. Structural characterization and intramolecular aliphatic C-H oxidation ability of M(III)(mu-O)2M(III) complexes of Ni and Co with the hydrotris-(3,5-dialkyl-4-X-pyrazolyl)borate ligands TpMe2,X (X = Me, H, Br) and TpiPr2.

    PubMed

    Hikichi, S; Yoshizawa, M; Sasakura, Y; Komatsuzaki, H; Moro-oka, Y; Akita, M

    2001-12-03

    Reaction of the dinuclear M(II)-bis(mu-hydroxo) complexes of nickel and cobalt, [(M(II)(TpR)]2(mu-OH)2] (M = Ni; 3Ni M = Co: 3Co), with one equivalent of H2O2 yields the corresponding M(III)-bis(mu-oxo) complexes, [[M(III)(TpR)]2-(mu-O)2] (M=Ni; 2Ni, M=Co: 2Co). The employment of a series of TpMe2,X (TpMe2,X = hydrotris(3,5-dimethyl-4-X-1-pyrazolyl)borate; X = Me, H, Br) as a metal supporting ligand makes it possible to isolate and structurally characterize the thermally unstable M(III)-bis-(mu-oxo) complexes 2Ni and 2Co. Both the starting (3Ni and 3Co) and resulting complexes (2Ni and 2Co) contain five-coordinate metal centers with a slightly distorted square-pyramidal geometry. Characteristic features of the nickel complexes 2Ni, such as the two intense absorptions around 400 and 300 nm in the UV-visible spectra and the apparent diamagnetism, are very similar to those of the previously reported bis(mu-oxo) species of Cu(III) and Ni(III) with ligands other than TpR, whereas the spectroscopic properties of the cobalt complexes 2Co (i.e., paramagnetically shifted NMR signals and a single intense absorption appearing at 350 nm) are clearly distinct from those of the isostructural nickel compounds 2Ni. Thermal decomposition of 2Ni and 2Co results in oxidation of the inner saturated hydrocarbyl substituents of the TpR ligand. Large kH/kD values obtained from the first-order decomposition rates of the TpMe3 and Tp(CD3)2,Me derivatives of 2 evidently indicate that the rate-determining step is an hydrogen abstraction from the primary C-H bond of the methyl substituents. mediated by the M(III)2-(mu-O)2 species. The nickel complex 2Ni shows reactivity about 10(3) times greater than that of the cobalt analogue 2Co. The oxidation ability of the M(III)(mu-O)2M(III) core should be affected by the hindered TpR ligand system, which can stabilize the +2 oxidation state of the metal centers.

  2. New Ru(II) complexes for dual photoreactivity: ligand exchange and (1)O2 generation.

    PubMed

    Knoll, Jessica D; Albani, Bryan A; Turro, Claudia

    2015-08-18

    Uncovering the factors that govern the electronic structure of Ru(II)-polypyridyl complexes is critical in designing new compounds for desired photochemical reactions, and strategies to tune excited states for ligand dissociation and (1)O2 production are discussed herein. The generally accepted mechanism for photoinduced ligand dissociation proposes that population of the dissociative triplet ligand field ((3)LF) state proceeds through thermal population from the vibrationally cooled triplet metal-to-ligand charge transfer ((3)MLCT) state; however, temperature-dependent emission spectroscopy provides varied activation energies using the emission and ligand exchange quantum yields for [Ru(bpy)2(L)2](2+) (bpy = 2,2'-bipyridine; L = CH3CN or py). This suggests that population of the (3)LF state proceeds from the vibrationally excited (3)MLCT state. Because the quantum yield of ligand dissociation for nitriles is much more efficient than that for py, steric bulk was introduced into the ligand set to distort the pseudo-octahedral geometry and lower the energy of the (3)LF state. The py dissociation quantum yield with 500 nm irradiation in a series of [Ru(tpy)(NN)(py)](2+) complexes (tpy = 2,2':6',2″-terpyridine; NN = bpy, 6,6'-dimethyl-2,2'-bipyridine (Me2bpy), 2,2'-biquinoline (biq)) increases by 2-3 orders of magnitude with the sterically bulky Me2bpy and biq ligands relative to bpy. Ultrafast transient absorption spectroscopy reveals population of the (3)LF state within 3-7 ps when NN is bulky, and density functional theory calculations support stabilized (3)LF states. Dual activity via ligand dissociation and (1)O2 production can be achieved by careful selection of the ligand set to tune the excited-state dynamics. Incorporation of an extended π system in Ru(II) complexes such as [Ru(bpy)(dppn)(CH3CN)2](2+) (dppn = benzo[i]dipyrido[3,2-a:2',3'-c]phenazine) and [Ru(tpy)(Me2dppn)(py)](2+) (Me2dppn = 3,6-dimethylbenzo[i]dipyrido[3,2-a:2',3'-c]phenazine) introduces

  3. New Ru(II) Complexes for Dual Photoreactivity: Ligand Exchange and 1O2 Generation

    PubMed Central

    Knoll, Jessica D.; Albani, Bryan A.; Turro, Claudia

    2016-01-01

    CONSPECTUS Uncovering the factors that govern the electronic structure of Ru(II)–polypyridyl complexes is critical in designing new compounds for desired photochemical reactions, and strategies to tune excited states for ligand dissociation and 1O2 production are discussed herein. The generally accepted mechanism for photoinduced ligand dissociation proposes that population of the dissociative triplet ligand field (3LF) state proceeds through thermal population from the vibrationally cooled triplet metal-to-ligand charge transfer (3MLCT) state; however, temperature-dependent emission spectroscopy provides varied activation energies using the emission and ligand exchange quantum yields for [Ru(bpy)2(L)2]2+ (bpy = 2,2′-bipyridine; L = CH3CN or py). This suggests that population of the 3LF state proceeds from the vibrationally excited 3MLCT state. Because the quantum yield of ligand dissociation for nitriles is much more efficient than that for py, steric bulk was introduced into the ligand set to distort the pseudo-octahedral geometry and lower the energy of the 3LF state. The py dissociation quantum yield with 500 nm irradiation in a series of [Ru(tpy)(NN)(py)]2+ complexes (tpy = 2,2′:6′,2″-terpyridine; NN = bpy, 6,6′-dimethyl-2,2′-bipyridine (Me2bpy), 2,2′-biquinoline (biq)) increases by 2–3 orders of magnitude with the sterically bulky Me2bpy and biq ligands relative to bpy. Ultrafast transient absorption spectroscopy reveals population of the 3LF state within 3–7 ps when NN is bulky, and density functional theory calculations support stabilized 3LF states. Dual activity via ligand dissociation and 1O2 production can be achieved by careful selection of the ligand set to tune the excited-state dynamics. Incorporation of an extended π system in Ru(II) complexes such as [Ru(bpy)(dppn)(CH3CN)2]2+ (dppn = benzo[i]dipyrido[3,2-a:2′,3′-c]phenazine) and [Ru(tpy)(Me2dppn)(py)]2+ (Me2dppn = 3,6-dimethylbenzo[i]dipyrido[3,2-a:2′,3

  4. Synthesis and luminescence properties of lanthanide complexes with a new tripodal ligand featuring N-thenylsalicylamide arms.

    PubMed

    Song, Xue-Qin; Zheng, Qing-Fang; Wang, Li; Liu, Wei-Sheng

    2012-01-01

    To explore the relationship between the structure of the ligands and the luminescent properties of the lanthanide complexes, luminescent lanthanide complexes of a new tripodal ligand, featuring N-thenylsalicylamide arms, were synthesized and characterized by elemental analysis, IR and TGA measurements. Photophysical properties of the complexes were studied by means of UV - visible absorption and steady-state luminescence spectroscopy. The results of UV - vis spectra indicate that metal binding does not disturb the electronic structure of the ligand. Excited-state luminescence lifetimes and quantum yields of the complexes were determined. The photoluminescence analysis suggested that there is an efficient ligand - Ln(III) energy transfer for the Tb(III) complex, and the ligand is an efficient 'antenna' for Tb(III). From a more general perspective, the results demonstrated the potential application of the lanthanide complex as luminescent materials in material chemistry.

  5. Step by Step Assembly of Polynuclear Lanthanide Complexes with a Phosphonated Bipyridine Ligand.

    PubMed

    Souri, Nabila; Tian, Pingping; Lecointre, Alexandre; Lemaire, Zoé; Chafaa, Salah; Strub, Jean-Marc; Cianférani, Sarah; Elhabiri, Mourad; Platas-Iglesias, Carlos; Charbonnière, Loïc J

    2016-12-19

    The synthesis of the octadentate ligand L (LH8 = ((([2,2'-bipyridine]-6,6'-diylbis(methylene))bis(azanetriyl))tetrakis(methylene))tetrakis(phosphonic acid)) is reported. The coordination of L with various lanthanide cations was monitored by absorption and luminescence spectrophotometric titration experiments (Ln = Tb, Yb), potentiometry (Ln = La, Eu, Lu), and mass spectrometry (Ln = Tb). It was found that L forms very stable mononuclear (LnL) species in aqueous solutions (log K = 19.80(5), 19.5(2), and 19.56(5) for La, Eu, and Lu, respectively) with no particular trend along the series. Spectroscopic data showed the Ln cations to be enclosed in the cavity formed by the octadentate ligand, thereby shielding the metal from interactions with water molecules in the first coordination sphere. When more than one equivalent of cations is added, the formation of polynuclear [(LnL)2Lnx] complexes (x = 1-3) can be observed, the presence of which could be confirmed by electrospray and MALDI mass spectrometry experiments. DFT modeling of the mononuclear (LnL) complexes indicated that the coordination of the cation in the cavity of the ligand results in a very asymmetric charge distribution, with a region of small negative electrostatic potential on the hemisphere composed of the chromophoric bipyridyl moiety and an electron-rich domain at the opposite hemisphere around the four phosphonate functions. DFT further showed that this polarization is most likely at the origin of the strong interactions between the (LnL) complexes and the incoming additional cations, leading to the formation of the polynuclear species. (1)H and (31)P NMR were used to probe the possible exchange of the lanthanide complexed in the cavity of the ligand in D2O, revealing no detectable exchange after 4 weeks at 80 °C and neutral pD, therefore pointing out an excellent kinetic inertness.

  6. Pore water distributions of dissolved copper and copper-complexing ligands in estuarine and coastal marine sediments

    SciTech Connect

    Skrabal, S.A.; Donat, J.R.; Burdige, D.J.

    2000-06-01

    The distributions and seasonal variability of total dissolved Cu (TDCu) and Cu-complexing ligands in sediment pore waters have been investigated at two contrasting sites in the Chesapeake Bay. Two ligand classes, which differ on the basis of the conditional stability constants (K{prime}{sub cond}) of their Cu complexes, were detected at all depths at both sites. For comparison, one pore water profile from a slope station off of the Chesapeake Bay also showed the presence of two ligand classes. Virtually all TDCu fluxing from these sediments is complexed during sediment-water exchange. A relatively small fraction of the TDCu is exchanged as inorganic species, which are widely regarded as the most bioavailable form of Cu. Total ligand concentrations are 15 to >100 times higher in the upper intervals of the pore waters relative to ligand concentrations in the bottom waters of the Chesapeake Bay (30--60 nM), consistent with previous observations of fluxes of these ligands from the sediments to overlying waters. These results suggest that sediments are potentially significant sources of Cu-complexing ligands to the overlying waters of the Chesapeake Bay, and perhaps, other shallow water estuarine and coastal environments. Copper-complexing ligands released from sediment pore waters may play an important role in influencing Cu speciation in overlying waters.

  7. Emissive bis-salicylaldiminato Schiff base ligands and their zinc(II) complexes: Synthesis, photophysical properties, mesomorphism and DFT studies

    NASA Astrophysics Data System (ADS)

    Paul, Manoj Kr.; Dilipkumar Singh, Y.; Bedamani Singh, N.; Sarkar, Utpal

    2015-02-01

    Bis-salicylaldiminato Schiff base ligands and their Zn(II) complexes derived from 2,3-Diaminomaleonitrile (DAMN) were synthesized. Their molecular structures, photophysical properties and mesogenic behaviors were investigated. The ligands and their Zn(II) complexes were characterized by using elemental analysis, FT-IR, 1H NMR and molar conductivity measurements. Photophysical properties of ligands and their Zn(II) complexes were investigated in different polar solvents by using UV-visible and fluorescence spectroscopic studies. Ligands emit green light whereas complexes emit orange light upon irradiation with UV-visible light. The liquid crystalline phases of ligands and their Zn(II) complexes were characterized by polarizing optical microscopy and differential scanning calorimetry. The ligand having longer 4-n-octadecyloxy chain (n = 18) displays columnar phase whereas the lower homologues (n = 16, 12) did not show mesophase. The Zn(II) complexes having 4-n-octadecyloxy end chain display smectic B like phase whereas other lower homologues are non mesogenic in nature. The thermal stability of the compounds were studied by using thermo gravimetric analysis. The density functional theory was carried out to obtain the stable molecular conformation, dipole moment, molecular orbitals and polarizability of the ligands and their Zn(II) complexes.

  8. Synthesis, structure, photophysical and catalytic properties of CuI-Iodide complexes of di-imine ligands

    NASA Astrophysics Data System (ADS)

    Mondal, Jahangir; Ghorai, Anupam; Singh, Sunil K.; Saha, Rajat; Patra, Goutam K.

    2016-03-01

    Two new multifunctional CuII based complexes [CuI(L1)] (1) and [Cu2(μ-I)2(L2)] (2) with bidentate N-N donor ligands L1 and imino-pyridyl ligand L2 have been synthesized and characterized by elemental analysis, IR, UV-Vis, NMR and single crystal X-ray crystallography. The bidentate di-imine ligand (L1) forms monomeric CuI complex (1) whereas the bis-bidentate di-imine ligand (L2) favours the formation of dimeric CuI complex (2) in association with two bridging iodides. Structural analysis reveals that in complex 1 each monomeric units are connected by π⋯π and C-H⋯π interactions to form 3D supramolecular structure whereas in complex 2 each molecules are connected by only π⋯π interactions to form 3D supramolecular structure. The photoluminescence properties of the complexes have been studied at room temperature. Theoretical analysis shows that HOMO is focused on the Cu and iodides while LUMO is focused on di-imine ligands and the luminescence behaviour arises due to metal to ligand charge transfer (MLCT) and halide to ligand charge transfer (XLCT). The complexes 1 and 2 are effective catalysts for the synthesis of 2-substituted benzoxazoles.

  9. Tuning tetranuclear manganese-oxo core electronic properties: adamantane-shaped complexes synthesized by ligand exchange.

    PubMed

    Dubé, Christopher E; Mukhopadhyay, Sumitra; Bonitatebus, Peter J; Staples, Richard J; Armstrong, William H

    2005-07-11

    A series of adamantane-shaped [Mn4O6]4+ aggregates has been prepared. Ligand substitution reactions of [Mn4O6(bpea)4](ClO4)4 (1) with tridentate amine and iminodicarboxylate ligands in acetonitrile affords derivative clusters [Mn4O6(tacn)4](ClO4)4 (4), [Mn4O6(bpea)2(dien)2](ClO4)4)(5), [Mn4O6(Medien)4](ClO4)4 (6), [Mn4O6(tach)4](ClO4)4 (7), [Mn4O6(bpea)2(me-ida)2] (8), [Mn4O6(bpea)2(bz-ida)2] (9), [Mn4O6(bpea)2((t)bu-ida)2] (10), and [Mn4O6(bpea)2((c)pent-ida)2] (11) generally on the order of 10 min with retention of core nuclearity and oxidation state. Of these complexes, only 4 had been synthesized previously. Characterization of two members of this series by X-ray crystallography reveals that compound 7 crystallizes as [Mn4O6(tach)4](ClO4)4 x 3CH3CN x 4.5H2O in the cubic space group Fmm and compound 11 crystallizes as [Mn4O6(bpea)2((c)pent-ida)2].7MeOH in the monoclinic space group C2/c. The unique substitution chemistry of 1 with iminodicarboxylate ligands afforded asymmetrically ligated complexes 8-11, the mixed ligand nature of which is most likely unachievable using self-assembly synthetic methods. A special feature of the iminodicarboxylate ligand complexes 8-11 is the substantial site differentiation of the oxo bridges of the [Mn4O6]4+ cores. While there are four site-differentiated oxo bridges in 8, the solution structural symmetry of 8H+ reveals essentially a single protonation isomer, in contrast to the observation of two protonation isomers for 1H+, one for each of the site-differentiated oxo bridges in 1. Magnetic susceptibility measurements on 4, 7, 8, and 9 indicate that each complex is overall ferromagnetically coupled, and variable-field magnetization data for 7 and 9 are consistent with an S = 6 ground state. Electrochemical analysis demonstrates that ligand substitution of bpea affords accessibility to the Mn(V)(Mn(IV))3 oxidation state.

  10. A ligand field model for MCD spectra of biological cupric complexes.

    PubMed Central

    Landrum, G A; Ekberg, C A; Whittaker, J W

    1995-01-01

    A ligand field calculation of magnetic circular dichroism (MCD) spectra is described that provides new insights into the information contained in electronic spectra of copper sites in metalloenzymes and synthetic analogs. The ligand field model uses metal-centered p- and f-orbitals to model sigma, pi LMCT mixing mechanism for intensity, allowing the basic features of optical absorption, MCD, and electron paramagnetic resonance spectra to be simultaneously computed from a single set of parameters and the crystallographically determined ligand coordinates. We have used the model to predict changes in spectra resulting from the transformation of electronic wavefunctions under systematic variation in geometry in pentacoordinate ML5 complexes. The effectiveness of the calculation is demonstrated for two synthetic copper model compounds and a galactose oxidase enzyme complex representing limiting coordination geometries. This analysis permits immediate recognition of characteristic patterns of MCD intensity and correlation with geometry. A complementarity principle between MCD and CD spectra of transition metal complexes is discussed. Images Scheme 3 PMID:8527681

  11. Mechanistic insights into the chemistry of RuII complexes containing Cl and DMSO ligands.

    PubMed

    Mola, Joaquim; Romero, Isabel; Rodríguez, Montserrat; Bozoglian, Fernando; Poater, Albert; Solà, Miquel; Parella, Teodor; Benet-Buchholz, Jordi; Fontrodona, Xavier; Llobet, Antoni

    2007-12-10

    Two new isomers trans,mer-[RuIICl2(bpea)(DMSO)], 2a, and cis,fac-[RuIICl2(bpea)(DMSO)], 2b, (bpea = N,N-bis(2-pyridylmethyl)ethylamine), as well as the bis-DMSO complex trans,fac-[RuIICl(bpea)(DMSO)2]Cl, 3, have been synthesized and characterized by cyclic voltammetry and UV-vis and 1D and 2D NMR spectroscopy in solution. Their solid-state structure has also been solved by means of single-crystal X-ray diffraction analysis. All the three complexes display a ruthenium metal center possessing a distorted-octahedral type of coordination, where the bpea ligand is coordinated in a meridional fashion in 2a and in a facial fashion in 2b and 3. The isomer 2a is the kinetically favored and thus can be thermally converted into 2b, that is the thermodynamically favored one. A thorough kinetic analysis strongly points toward a dissociative mechanism, where in the first step a chloro ligand is removed from the metal coordination sphere, followed by a geometric rearrangement before the chloro ligand coordinates again, generating the final complex. DFT calculations agree with the experimental data for the proposed mechanism and allow us to further characterize the mechanism of the 2a --> 2b rearrangement by obtaining the intermediates and transition state.

  12. New Ru(II) Complex for Dual Activity: Photoinduced Ligand Release and (1)O2 Production.

    PubMed

    Loftus, Lauren M; White, Jessica K; Albani, Bryan A; Kohler, Lars; Kodanko, Jeremy J; Thummel, Randolph P; Dunbar, Kim R; Turro, Claudia

    2016-03-07

    The new complex [Ru(pydppn)(biq)(py)](2+) (1) undergoes both py photodissociation in CH3CN with Φ500 =0.0070(4) and (1)O2 production with ΦΔ =0.75(7) in CH3 OH from a long-lived (3) ππ* state centered on the pydppn ligand (pydppn=3-(pyrid-2-yl)benzo[i]dipyrido[3,2-a:2',3'-c]phenazine; biq = 2,2'-biquinoline; py=pyridine). This represents an order of magnitude decrease in the Φ500 compared to the previously reported model compound [Ru(tpy)(biq)(py)](2+) (3) (tpy=2,2':6',2''-terpyridine) that undergoes only ligand exchange. The effect on the quantum yields by the addition of a second deactivation pathway through the low-lying (3) ππ* state necessary for dual reactivity was investigated using ultrafast and nanosecond transient absorption spectroscopy, revealing a significantly shorter (3) MLCT lifetime in 1 relative to that of the model complex 3. Due to the structural similarities between the two compounds, the lower values of Φ500 and ΦΔ compared to that of [Ru(pydppn)(bpy)(py)](2+) (2) (bpy=2,2'-bipyridine) are attributed to a competitive excited state population between the (3) LF states involved in ligand dissociation and the long-lived (3) ππ* state in 1. Complex 1 represents a model compound for dual activity that may be applied to photochemotherapy.

  13. Competitive ligand exchange between Cu-humic acid complexes and methanobactin.

    PubMed

    Pesch, M-L; Hoffmann, M; Christl, I; Kraemer, S M; Kretzschmar, R

    2013-01-01

    Copper has been found to play a key role in the physiology of methanotrophic micro-organisms, and methane oxidation may critically depend on the availability of Cu. In natural environments, such as soils, sediments, peat bogs, and surface waters, the presence of natural organic matter (NOM) can control the bioavailability of Cu by forming strong metal complexes. To promote Cu acquisition, methanotrophs exude methanobactin, a ligand known to have a high affinity for Cu. In this study, the capability of methanobactin for Cu acquisition from NOM was investigated using humic acid (HA) as a model substance. The kinetics of ligand exchange between Cu-HA and methanobactin was observed by UV-vis spectroscopy, and the speciation of Cu bound to methanobactin was determined by size-exclusion chromatography coupled to an ICP-MS. The results showed that Cu was mobilized from HA by a fast ligand exchange reaction following a second-order rate law with first-order kinetics for both methanobactin and Cu-HA complexes. The reaction rates decreased with decreasing temperature. Equilibrium experiments indicated that methanobactin was not sorbed to HA and proved that methanobactin is competitive with HA for Cu binding by forming strong 1:1 Cu-methanobactin complexes. Consequently, our results demonstrate that methanobactin can efficiently acquire Cu in organic-rich environments. © 2012 Blackwell Publishing Ltd.

  14. Highly Fluorescent Group 13 Metal Complexes with Cyclic, Aromatic Hydroxamic Acid Ligands

    SciTech Connect

    Seitz, Michael; Moore, Evan G.; Raymond, Kenneth N.

    2008-02-11

    The neutral complexes of two ligands based on the 1-oxo-2-hydroxy-isoquinoline (1,2-HOIQO) motif with group 13 metals (Al, Ga, In) show bright blue-violet luminescence in organic solvents. The corresponding transition can be attributed to ligand-centered singlet emission, characterized by a small Stokes shifts of only a few nm combined with lifetimes in the range between 1-3 ns. The fluorescence efficiency is high, with quantum yields of up to 37% in benzene solution. The crystal structure of one of the indium(III) complexes (trigonal space group R-3, a = b = 13.0384(15) {angstrom}, c = 32.870(8) {angstrom}, ? = {beta} = 90{sup o}, {gamma} = 120{sup o}, V = 4839.3(14) {angstrom}{sup 3}, Z = 6) shows a six-coordinate geometry around the indium center which is close to trigonal-prismatic, with a twist angle between the two trigonal faces of 20.7{sup o}. Time-dependent density functional theory (TD-DFT) calculations (Al and Ga: B3LYP/6-31G(d)); In: B3LYP/LANL2DZ of the fac and mer isomers with one of the two ligands indicate that there is no clear preference for either one of the isomeric forms of the metal complexes. In addition, the metal centers do not have a significant influence on the electronic structure, and as a consequence, on the predominant intraligand optical transitions.

  15. Counter-ligand control of the electronic structure in dinuclear copper-tetrakisguanidine complexes.

    PubMed

    Ziesak, Alexandra; Wesp, Tobias; Hübner, Olaf; Kaifer, Elisabeth; Wadepohl, Hubert; Himmel, Hans-Jörg

    2015-11-28

    The redox-active GFA (Guanidino-Functionalized Aromatic compound) 1,4,5,8-tetrakis(tetramethylguanidino)-naphthalene (6) is used to synthesize new dinuclear copper complexes of the formula [6(CuX2)2] with different electronic structures. With X = OAc, a dinuclear Cu(II) complex of the neutral GFA is obtained (electronic structure [Cu(II)-GFA-Cu(II)], two unpaired electrons), and with X = Br a diamagnetic dinuclear Cu(I) complex of the dicationic GFA (electronic structure [Cu(I)-GFA(2+)-Cu(I)], closed-shell singlet state). The different electronic structures lead to significant differences in the optical, structural and magnetic properties of the complexes. Furthermore, the complex [6(CuI)2](2+) (electronic structure [Cu(I)-GFA(2+)-Cu(I)], closed-shell singlet state) is synthesized by reaction of 6(2+) with two equivalents of CuI. Slow decomposition of this complex in solution leads to the fluorescent dye 2,7-bis(dimethylamino)-1,3,6,8-tetraazapyrene. In an improved synthesis of this tetraazapyrene, 6 is reacted with CuBr in the presence of dioxygen. Quantum chemical calculations show that the addition of counter-ligands to the trigonal planar Cu(I) atoms of [6(CuI)2](2+) favors or disfavors one of the electronic structures, depending on the nature of the counter-ligand.

  16. Synthesis, structural and electrochemical properties of nickel(II) sulfamethazine complex with diethylenetriamine ligand.

    PubMed

    Bulut, İclal; Öztürk, Filiz; Bulut, Ahmet

    2015-03-05

    In this study, [Ni(dien)2]⋅smz2⋅(Hsmz: sulfamethazine and dien: diethylenetriamine) complex has been synthesized and its crystal structure has been determined by X-ray diffraction technique. The title complex crystallizes in orthorhombic system with space group Pbnb [a=8.556(5), b=16.228(5), c=28.209(5)Å, V=3917(3)Å(3) and Z=4]. The nickel(II) ion has distorted octahedral coordination geometry. The metal atom, which rides on a crystallographic center of symmetry, is coordinated by six nitrogen atoms of two dien ligands to form a discrete [Ni(dien)2](2+) unit, which captures two sulfamethazine ions, each through intermolecular hydrogen bonds. The powder EPR spectrum of Cu(2+) doped Ni(II) complex was recorded at room temperature. The vibrational investigation has been carried out by considering the characteristic bands related to the functional groups of the complex. The electrochemical behavior of Ni(II) ions in the presence and in the absence of smz and dien were studied by square wave and cyclic voltammetry. A well-defined irreversible peak at -1.112V different from those of the Ni(II)-smz (-0.876V) and the Ni(II)-dien complex (-1.064V) was observed in the solution containing Ni(II) ions, which was attributed to the formation of the new mixed ligand complex of Ni(II) with smz and dien.

  17. Segregation of receptor-ligand complexes in cell adhesion zones: phase diagrams and the role of thermal membrane roughness

    NASA Astrophysics Data System (ADS)

    Różycki, B.; Lipowsky, R.; Weikl, T. R.

    2010-09-01

    The adhesion zone of immune cells, the 'immunological synapse', exhibits characteristic domains of receptor-ligand complexes. The domain formation is probably caused by a length difference of the receptor-ligand complexes, and has been investigated in experiments in which T cells adhere to supported membranes with anchored ligands. For supported membranes with two types of anchored ligands, MHCp and ICAM1, which bind to the T-cell receptor (TCR) and the receptor LFA1 in the cell membrane, the coexistence of domains of the TCR-MHCp and LFA1-ICAM1 complexes in the cell adhesion zone has been observed for a wide range of ligand concentrations and affinities. For supported membranes with long and short ligands that bind to the same cell receptor CD2, in contrast, domain coexistence has been observed for a quite narrow ratio of ligand concentrations. In this paper, we determine detailed phase diagrams for cells adhering to supported membranes with a statistical-physical model of cell adhesion. We find a characteristic difference between the adhesion scenarios in which two types of ligands in a supported membrane bind (i) to the same cell receptor or (ii) to two different cell receptors, which helps us to explain the experimental observations. Our phase diagrams fully include thermal shape fluctuations of the cell membranes on nanometer scales, which lead to a critical point for the domain formation and to a cooperative binding of the receptors and ligands.

  18. Characterization and biological activities of two copper(II) complexes with dipropylenetriamine and diamine as ligands

    NASA Astrophysics Data System (ADS)

    AL-Noaimi, Mousa; Choudhary, Mohammad I.; Awwadi, Firas F.; Talib, Wamidh H.; Hadda, Taibi Ben; Yousuf, Sammer; Sawafta, Ashraf; Warad, Ismail

    2014-06-01

    Two new mixed-ligand copper(II) complexes, [Cu(dipn)(Nsbnd N)]Br2(1-2) [dipn = dipropylenetriamine, Nsbnd N = ethylenediamine (en) (1) and propylenediamine (pn) (2)], have been synthesized. These complexes were characterized by spectroscopic and thermal techniques. Crystal structure for 2 shows a distorted trigonal-bipyramidal geometry around Cu(II) ion with one solvate water molecule. Antimicrobial and antiproliferative assays were conducted to evaluate the biological activities of these complexes. The complexes exhibit a promising antimicrobial effect against an array of microbes at 200 μg/mL concentration. The antiproliferative assay shows a high potential of these complexes to target Human keratinocyte cell line with IC50 values of 155 and 152 μM. The absorption spectrum of 2 in water was modeled by time-dependent density functional theory (TD-DFT).

  19. Hybrid NS ligands supported Cu(I)/(II) complexes for azide-alkyne cycloaddition reactions.

    PubMed

    Bai, Shi-Qiang; Jiang, Lu; Zuo, Jing-Lin; Hor, T S Andy

    2013-08-21

    Three copper complexes of nitrogen-sulfur donor ligands, [CuBr₂(L1)] (1), [CuCl₂(L2)₂] (2) and [Cu₂I₂(L3)]n (3) (L1 = bis(2-cyclohexylsulfanylethyl)amine, L2 = 2-(benzylsulfanylmethyl)pyridine and L3 = 2-(4-pyridylsulfanylmethyl)pyridine), have been synthesized and characterized by single-crystal X-ray diffraction (XRD), powder XRD and TGA analysis. Complexes 1 and 2 are mononuclear Cu(II) complexes and are EPR active with distorted square-pyramidal and octahedral geometry, respectively. Complex 3 is a two-dimensional tetrahedral Cu(I) coordination polymer with 16- and 20-membered metallocycles. These complexes show good catalytic activities for one-pot azide-alkyne cycloaddition reactions in CH₃OH-H₂O.

  20. Phenoxy-bridged binuclear Zn(II) complex holding salen ligand: Synthesis and structural characterization

    NASA Astrophysics Data System (ADS)

    Azam, Mohammad; Al-Resayes, Saud I.

    2016-03-01

    A novel binuclear phenoxo-bridged zinc complex obtained from the interaction of ligand, 2,2-(1E,1E)-(2,2-dimethylpropane-1,3-diyl)bis(azanylylidene) bis(methanylylidene)diphenol with zinc chloride is reported. The synthesized and isolated zinc complex has been characterized by FT-IR, 1H- and 13C- NMR, ESI-MS, TGA/DTA and single crystal X-ray diffraction studies. The phenoxo-bridge in this binuclear Zn(II) complex is due to the phenolic oxygen of the salen liagnd. The complex crystallizes in monoclinic P-1 space group, and different geometry has been assigned for both zinc ions in the complex.

  1. Chemical consequences of pyrazole orientation in Ru(II) complexes of unsymmetric quinoline-pyrazole ligands.

    PubMed

    Hedberg Wallenstein, Joachim; Fredin, Lisa A; Jarenmark, Martin; Abrahamsson, Maria; Persson, Petter

    2016-08-07

    A series of homoleptic Ru(II) complexes including the tris-bidentate complexes of a new bidentate ligand 8-(1-pyrazol)-quinoline (Q1Pz) and bidentate 8-(3-pyrazol)-quinoline (Q3PzH), as well as the bis-tridentate complex of bis(quinolinyl)-1,3-pyrazole (DQPz) was studied. Together these complexes explore the orientation of the pyrazole relative to the quinoline. By examining the complexes structurally, photophysically, photochemically, electrochemically, and computationally by DFT and TD-DFT, it is shown that the pyrazole orientation has a significant influence on key properties. In particular, its orientation has noticeable effects on oxidation and reduction potentials, photostability and proton sensitivity, indicating that [Ru(Q3PzH)3](2+) is a particularly good local environment acidity-probe candidate.

  2. A novel hexachelating amino-thiol ligand and its complex with gallium(III)

    SciTech Connect

    Moore, D.A.; Fanwick, P.E.; Welch, M.J. )

    1990-02-21

    The ligand 1,4,7-tris(2-mercaptoethyl)-1,4,7-triazacyclononane, TS-TACNH{sub 3} (1), was synthesized from the parent amine, TACN, by reaction with ethylene sulfide in benzene. TS-TACNH{sub 3} undergoes reaction with Ga(NO{sub 3}){sub 3}{times}9H{sub 2}O in ethanol to give the neutral complex Ga(TS-TACN) (2). The complex may be recrystallized from dichloromethane as pale pink needles of the disolvate and the crystal structure is reported. There are four molecules of complex and two molecules of solvation (CH{sub 2}Cl{sub 2}) present per unit cell. The gallium is fully chelated in a slightly distorted octahedral environment by the three amine nitrogens and the three thiolate sulfurs. For comparison, the Ga{sup 3+} complex of the similarly hexachelating ligand 1,4,7-triazacyclononane-1,4,7-triacetic acid, NOTA, is also presented. The complex Ga(NOTA) (3), crystallizes from boiling water also as pale pink needles. Again, the metal center is fully chelated in a slightly distorted octahedral environment. The degree of distortion may be expressed as trigonal twist, {phi}, where {phi} = 0{degree} for a true octahedron and {phi} = 60{degree} for a trigonal prism. While both Ga(TS-TACN) and Ga(NOTA) are potentially isostructural, in regard to coordination geometry, with trigonal-prismatic Fe(NOTA) ({phi} = 34.8{degree}), the gallium(III) complexes are only slightly distorted from a regular octahedral coordination sphere (Ga(NOTA) {phi} = 12.4{degree} and Ga(TS-TACN) {phi} = 10.4{degree}). Preliminary results indicate {sup 68}Ga(TS-TACN) to be stable in vivo versus the blood protein transferrin, indicating a relatively high stability constant for this hexachelating ligand. 14 refs., 7 figs., 3 tabs.

  3. Triptycene-Based Chiral and meso-N-Heterocyclic Carbene Ligands and Metal Complexes.

    PubMed

    Savka, Roman; Bergmann, Marvin; Kanai, Yuki; Foro, Sabine; Plenio, Herbert

    2016-07-04

    Based on 1-amino-4-hydroxy-triptycene, new saturated and unsaturated triptycene-NHC (N-heterocyclic carbene) ligands were synthesized from glyoxal-derived diimines. The respective carbenes were converted into metal complexes [(NHC)MX] (M=Cu, Ag, Au; X=Cl, Br) and [(NHC)MCl(cod)] (M=Rh, Ir; cod=1,5-cyclooctadiene) in good yields. The new azolium salts and metal complexes suffer from limited solubility in common organic solvents. Consequently, the introduction of solubilizing groups (such as 2-ethylhexyl or 1-hexyl by O-alkylation) is essential to render the complexes soluble. The triptycene unit infers special steric properties onto the metal complexes that enable the steric shielding of selected areas close to the metal center. Next, chiral and meso-triptycene based N-heterocyclic carbene ligands were prepared. The key step in the synthesis of the chiral ligand is the Buchwald-Hartwig amination of 1-bromo-4-butoxy-triptycene with (1S,2S)-1,2-diphenyl-1,2-diaminoethane, followed by cyclization to the azolinium salt with HC(OEt)3 . The analogous reaction with meso-1,2-diphenyl-1,2-diaminoethane provides the respective meso-azolinium salt. Both the chiral and meso-azolinium salts were converted into metal complexes including [(NHC)AuCl], [(NHC)RhCl(cod)], [(NHC)IrCl(cod)], and [(NHC)PdCl(allyl)]. An in situ prepared chiral copper complex was tested in the enantioselective borylation of α,β-unsaturated esters and found to give an excellent enantiomeric ratio (er close to 90:10). © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  4. Sediments as a source of metals and complexing ligands, a study of the Venice Lagoon, Italy

    NASA Astrophysics Data System (ADS)

    Chapman, C. S.; van den Berg, C. M. G.; Capodaglio, G.

    2003-04-01

    Venice Lagoon is a shallow and in parts, contaminated water way. Studies are underway to better understand the nature of the chemical contamination. It is hoped that this knowledge will aid in toxicological studies and possible future remediation of the lagoon. Chemical speciation can be a key factor in assessing the bioavailability and hence toxicological impact of metals such as Pb to marine life. The aim of this work is to investigate coastal sediments as a source of metals. To do this benthic chambers were specifically designed to quantify the levels, fluxes and speciation of the metals and the corresponding ligands to and from the sediments. The chamber was placed near a petrochemical plant within the lagoon and samples were collected over approximately 45hrs, at 3-4hr intervals. Samples were then analysed for dissolved Pb, Cd, Cu and Cu speciation). Dissolved thiols were also assessed as a specific complexing ligand. The expected trends in the data would be the steady release of thiols and metal concentrations rising or falling as a function of Eh or ligand concentration. Eh and O2 data showed the formation of a suboxic environment within the chambers, indicating their success in isolating the system and this work presents the metal and ligand data. Other work discussed is the future deployment of an in-situ probe to provide real time analysis.

  5. A multi-protein receptor-ligand complex underlies combinatorial dendrite guidance choices in C. elegans

    PubMed Central

    Zou, Wei; Shen, Ao; Dong, Xintong; Tugizova, Madina; Xiang, Yang K; Shen, Kang

    2016-01-01

    Ligand receptor interactions instruct axon guidance during development. How dendrites are guided to specific targets is less understood. The C. elegans PVD sensory neuron innervates muscle-skin interface with its elaborate dendritic branches. Here, we found that LECT-2, the ortholog of leukocyte cell-derived chemotaxin-2 (LECT2), is secreted from the muscles and required for muscle innervation by PVD. Mosaic analyses showed that LECT-2 acted locally to guide the growth of terminal branches. Ectopic expression of LECT-2 from seam cells is sufficient to redirect the PVD dendrites onto seam cells. LECT-2 functions in a multi-protein receptor-ligand complex that also contains two transmembrane ligands on the skin, SAX-7/L1CAM and MNR-1, and the neuronal transmembrane receptor DMA-1. LECT-2 greatly enhances the binding between SAX-7, MNR-1 and DMA-1. The activation of DMA-1 strictly requires all three ligands, which establishes a combinatorial code to precisely target and pattern dendritic arbors. DOI: http://dx.doi.org/10.7554/eLife.18345.001 PMID:27705746

  6. Collisional unfolding of multiprotein complexes reveals cooperative stabilization upon ligand binding

    PubMed Central

    Niu, Shuai; Ruotolo, Brandon T

    2015-01-01

    Cooperative binding mechanisms are a common feature in biology, enabling a diverse range of protein-based molecular machines to regulate activities ranging from oxygen uptake to cellular membrane transport. Much, however, is not known about such cooperative binding mechanisms, including how such events typically add to the overall stability of such protein systems. Measurements of such cooperative stabilization events are challenging, as they require the separation and resolution of individual protein complex bound states within a mixture of potential stoichiometries to individually assess protein stabilities. Here, we report ion mobility-mass spectrometry results for the concanavalin A tetramer bound to a range of polysaccharide ligands. We use collision induced unfolding, a relatively new methodology that functions as a gas-phase analog of calorimetry experiments in solution, to individually assess the stabilities of concanavalin A bound states. By comparing the differences in activation voltage required to unfold different concanavalin A–ligand stoichiometries, we find evidence suggesting a cooperative stabilization of concanavalin A occurs upon binding most carbohydrate ligands. We critically evaluate this observation by assessing a broad range of ligands, evaluating the unfolding properties of multiple protein charge states, and by comparing our gas-phase results with those obtained from calorimetry experiments carried out in solution. PMID:25970849

  7. Synthetic control of excited-state properties in cyclometalated Ir(III) complexes using ancillary ligands.

    PubMed

    Li, Jian; Djurovich, Peter I; Alleyne, Bert D; Yousufuddin, Muhammed; Ho, Nam N; Thomas, J Christopher; Peters, Jonas C; Bau, Robert; Thompson, Mark E

    2005-03-21

    The synthesis and photophysical characterization of a series of (N,C(2')-(2-para-tolylpyridyl))2 Ir(LL') [(tpy)2 Ir(LL')] (LL' = 2,4-pentanedionato (acac), bis(pyrazolyl)borate ligands and their analogues, diphosphine chelates and tert-butylisocyanide (CN-t-Bu)) are reported. A smaller series of [(dfppy)2 Ir(LL')] (dfppy = N,C(2')-2-(4',6'-difluorophenyl)pyridyl) complexes were also examined along with two previously reported compounds, (ppy)2 Ir(CN)2- and (ppy)2 Ir(NCS)2- (ppy = N,C(2')-2-phenylpyridyl). The (tpy)2 Ir(PPh2CH2)2 BPh2 and [(tpy)2 Ir(CN-t-Bu)2](CF3SO3) complexes have been structurally characterized by X-ray crystallography. The Ir-C(aryl) bond lengths in (tpy)2 Ir(CN-t-Bu)2+ (2.047(5) and 2.072(5) A) and (tpy)2 Ir(PPh2CH2)2 BPh2 (2.047(9) and 2.057(9) A) are longer than their counterparts in (tpy)2 Ir(acac) (1.982(6) and 1.985(7) A). Density functional theory calculations carried out on (ppy)2 Ir(CN-Me)2+ show that the highest occupied molecular orbital (HOMO) consists of a mixture of phenyl-pi and Ir-d orbitals, while the lowest unoccupied molecular orbital is localized primarily on the pyridyl-pi orbitals. Electrochemical analysis of the (tpy)2 Ir(LL') complexes shows that the reduction potentials are largely unaffected by variation in the ancillary ligand, whereas the oxidation potentials vary over a much wider range (as much as 400 mV between two different LL' ligands). Spectroscopic analysis of the cyclometalated Ir complexes reveals that the lowest energy excited state (T1) is a triplet ligand-centered state (3LC) on the cyclometalating ligand admixed with 1MLCT (MLCT = metal-to-ligand charge-transfer) character. The different ancillary ligands alter the 1MLCT state energy mainly by changing the HOMO energy. Destabilization of the 1MLCT state results in less 1MLCT character mixed into the T1 state, which in turn leads to an increase in the emission energy. The increase in emission energy leads to a linear decrease in ln(k(nr)) (k

  8. Preparation and Structural Properties of InIII–H Complexes

    PubMed Central

    Sickerman, Nathaniel S.; Henry, Renée M.; Ziller, Joseph W.

    2013-01-01

    The use of the tripodal ligands tris[(N'-tert-butylureaylato)-N-ethyl]aminato ([H3buea]3−) and the sulfonamide-based N,N',N"-[2,2',2"-nitrilotris(ethane-2,1-diyl)]tris(2,4,6-trimethylbenzene-sulfonamidato) ([MST]3−) has led to the synthesis of two structurally distinct In(III)–OH complexes. The first example of a five-coordinate indium(III) complex with a terminal hydroxide ligand, K[InIIIH3buea(OH)], was prepared by addition of In(OAc)3 and water to a deprotonated solution of H6buea. X-ray diffraction analysis, as well as FTIR and 1H NMR spectroscopic methods, provided evidence for the formation of a monomeric In(III)–OH complex. The complex contains an intramolecular hydrogen bonding (H-bonding) network involving the In(III)–OH unit and [H3buea]3− ligand, which aided in isolation of the complex. Isotope labeling studies verified the source of the hydroxo ligand as water. Treatment of the [InIIIMST] complex with a mixture of 15-crown-5 ether and NaOH led to isolation of the complex [15-crown-5⊃NaI-(μ-OH)-InIIIMST], whose solid-state structure was confirmed using X-ray diffraction methods. Nuclear magnetic resonance studies on this complex suggest it retains its heterobimetallic structure in solution. PMID:25309019

  9. Synthesis and molecular structures of zirconium complexes that contain bidentate amido ligands

    NASA Astrophysics Data System (ADS)

    Lococo, Matthew D.; Lee, Han; Jordan, Richard F.

    2009-02-01

    Zirconium complexes that contain bidentate amido ligands, Zr 2{EtN(CH 2) 3NEt} 4 ( 1), Zr 2{PhN(CH 2) 2NPh} 4 ( 2), Zr{Me 3SiN(CH 2) 3NSiMe 3} 2 ( 3) and Zr{ trans- N, N'-diphenyl-1,2-diaminocyclohexane}Cl 2(THF) 2 ( 4), have been prepared by the reaction of lithium diamido reagents with ZrCl 4, and characterized by single crystal X-ray diffraction. The molecular structures of complexes 1- 4 are discussed.

  10. Arene-ruthenium(II) complexes with hydrophilic P-donor ligands: versatile catalysts in aqueous media.

    PubMed

    Crochet, Pascale; Cadierno, Victorio

    2014-09-07

    In the last few years there has been increasing interest in the use of water as a reaction medium for catalysis, and therefore in designing water-soluble transition-metal catalysts. Half-sandwich (η(6)-arene)-ruthenium(ii) complexes are a versatile and well-known family of ruthenium compounds that exhibit a rich catalytic and coordination chemistry. This Perspective article focuses on the catalytic applications in aqueous media of (η(6)-arene)-ruthenium(ii) complexes containing water-soluble phosphines, and related hydrophilic P-donor ligands.

  11. The first defective extended chromium atom chain complex with amine ligand containing naphthyridine and pyrazine

    NASA Astrophysics Data System (ADS)

    Wang, Wen-Zhen; Geng, Shu-Bo; Liu, Shuang; Zhao, Dan; Jia, Xin-Gang; Wei, Hai-Long; Ismayilov, Rayyat H.; Yeh, Chen-Yu; Lee, Gene-Hsiang; Peng, Shie-Ming

    2017-06-01

    Through a pyrazine and naphthyridine-containing diamino ligand, N2,N7-di(pyrazin-2-yl)-1,8-naphthyridine-2,7-diamine (H2dpznda), defective extended metal atom chain complexes with one chromium(II) metal absent in centre, [Cr5(μ5-dpznda)4Cl2] (1) and [Cr5(μ5-dpznda)4(NCS)2] (2) were obtained. An electrochemistry research showed that the pentachromium(II) complexes were quite resistant to reduction although accessible to oxidation, with two reversible redox couples at E1/2 = +0.59 and +0.30 V.

  12. New Iridium Complex Coordinated with Tetrathiafulvalene Substituted Triazole-pyridine Ligand: Synthesis, Photophysical and Electrochemical Properties.

    PubMed

    Niu, Zhi-Gang; Xie, Hui; He, Li-Rong; Li, Kai-Xiu; Xia, Qing; Wu, Dong-Min; Li, Gao-Nan

    2016-01-01

    A new iridium(III) complex based on the triazole-pyridine ligand with tetrathiafulvalene unit, [Ir(ppy)2(L)]PF6 (1), has been synthesized and structurally characterized. The absorption spectra, luminescent spectra and electrochemical behaviors of L and 1 have been investigated. Complex 1 is found to be emissive at room temperature with maxima at 481 and 510 nm. The broad and structured emission bands are suggested a mixing of 3LC (3π-π*) and 3CT (3MLCT) excited states. The influence of iridium ion coordination on the redox properties of the TTF has also been investigated by cyclic voltammetry.

  13. Unexpected formation of a novel pyridinium-containing catecholate ligand and its manganese(III) complex.

    PubMed

    Sheriff, Tippu S; Watkinson, Michael; Motevalli, Majid; Lesin, Jocelyne F

    2010-01-07

    Nucleophilic aromatic substitution of tetrachloro-o-benzoquinone by pyridine and reduction of the o-quinone to the catechol by hydroxylamine forms 1,2-dihydroxy-3,5,6-trichlorobenzene-4-pyridinium chloride. This compound reacts with manganese(II) acetate in air to form chlorobis(3,5,6-trichlorobenzene 4-pyridinium catecholate)manganese(III), which represents the first complex of this ligand class to be structurally characterized by X-ray diffraction; this complex is active in the catalytic reduction of dioxygen to hydrogen peroxide under ambient conditions and turnover frequencies (TOFs) >10,000 h(-1) can be obtained.

  14. Oxidative Addition Complexes as Precatalysts for Cross-Coupling Reactions Requiring Extremely Bulky Biarylphosphine Ligands.

    PubMed

    Ingoglia, Bryan T; Buchwald, Stephen L

    2017-06-02

    In this report, we describe the application of palladium-based oxidative addition complexes (OACs) as effective precatalysts for C-N, C-O, and C-F cross-coupling reactions with a variety of (hetero)arenes. These complexes offer a convenient alternative to previously developed classes of precatalysts, particularly in the case of the bulkiest biarylphosphine ligands, for which palladacycle-based precatalysts do not readily form. The precatalysts described herein are easily prepared and stable to long-term storage under air.

  15. XRD, IR and XAFS studies of cobalt complexes having amino pyrazole dicarboxylate (APD) as ligand

    NASA Astrophysics Data System (ADS)

    Mishra, Ashutosh; Jain, Garima; Patil, H.

    2014-09-01

    X-ray absorption fine structure spectroscopic (XAFS) studies have been done on two cobalt complexes using APD (diethyl 4-amino-1-phenyl-1H-pyrazole-3,5 dicarboxylate) as ligand. The X-ray absorption spectra of the complexes have been recorded on beam line of synchrotron at Raja Ramanna Centre for Advanced Technology (RRCAT), Indore (India). The X-ray diffraction of the samples has also been carried out. FTIR studies of two samples were also reported in the present communication.

  16. Influence of the ligand alkyl chain length on the solubility, aqueous speciation, and kinetics of substitution reactions of water-soluble M3S4 (M = Mo, W) clusters bearing hydroxyalkyl diphosphines.

    PubMed

    Beltrán, Tomás F; Llusar, Rosa; Sokolov, Maxim; Basallote, Manuel G; Fernández-Trujillo, M Jesús; Pino-Chamorro, Jose Ángel

    2013-08-05

    Water-soluble [M3S4X3(dhbupe)3](+) diphosphino complexes (dhbupe = 1,2-bis(bis(hydroxybutyl)phosphino)ethane), 1(+) (M = Mo, X = Cl) and 2(+) (M = W; X = Br), have been synthesized by extending the procedure used for the preparation of their hydroxypropyl analogues by reaction of the M3S4(PPh3)3X4(solvent)x molecular clusters with the corresponding 1,2-bis(bishydroxyalkyl)diphosphine. The solid state structure of the [M3S4X3(dhbupe)3](+) cation possesses a C3 symmetry with a cuboidal M3S4 unit, and the outer positions are occupied by one halogen and two phosphorus atoms of the diphosphine ligand. At a basic pH, the halide ligands are substituted by hydroxo groups to afford the corresponding [Mo3S4(OH)3(dhbupe)3](+) (1OH(+)) and [W3S4(OH)3(dhbupe)3](+) (2OH(+)) complexes. This behavior is similar to that found in 1,2-bis(bis(hydroxymethyl)phosphino)ethane (dhmpe) complexes and differs from that observed for 1,2-bis(bis(hydroxypropyl)phosphino)ethane (dhprpe) derivatives. In the latter case, an alkylhydroxo group of the functionalized diphosphine replaces the chlorine ligands to afford Mo3S4 complexes in which the deprotonated dhprpe acts in a tridentate fashion. Detailed studies based on stopped-flow, (31)P{(1)H} NMR, and electrospray ionization mass spectrometry techniques have been carried out in order to understand the solution behavior and kinetics of interconversion between the different species formed in solution: 1 and 1OH(+) or 2 and 2OH(+). On the basis of the kinetic results, a mechanism with two parallel reaction pathways involving water and OH(-) attacks is proposed for the formal substitution of halides by hydroxo ligands. On the other hand, reaction of the hydroxo clusters with HX acids occurs with protonation of the OH(-) ligands followed by substitution of coordinated water by X(-).

  17. Pb(2+) complexes of small-cavity azamacrocyclic ligands: thermodynamic and kinetic studies.

    PubMed

    Liberato, A; Aguinaco, A; Clares, M P; Delgado-Pinar, E; Pitarch-Jarque, J; Blasco, S; Basallote, M G; García-España, E; Verdejo, B

    2017-05-23

    The synthesis, acid-base behavior and Pb(2+) coordination chemistry of the new aza-scorpiand like ligand 5-[2-(N-2-fluorenyl)ethylamino]-2,5,8-triaza[9]-2,6-pyridinophane (L1) have been studied by potentiometry, NMR and spectrofluorimetric titrations, and the results are compared with those obtained for the related compounds L2, lacking the fluorenyl group, and L3, the macrocycle lacking the pendant arm. The crystal structures obtained for complexes [PbL1][PbL1Cl](NO3)Cl2·4H2O (1) and [PbL3](ClO4)2 (2) reveal that the metal ion is located over the plane defined by the nitrogen atoms of the macrocyclic core due to its inability to accommodate the large Pb(2+) ion in the macrocyclic cavity. For L1, the secondary amino group of the pendant arm is implicated in the coordination of the metal ion, although the stereoactive lone pair of Pb(2+) prevents the closed conformation associated with the coordination of metal ions in aza-scorpiand derivatives. The kinetics of the acid-promoted dissociation of the ligand from the Pb(2+) complexes with the three ligands have been studied using stopped-flow with simultaneous absorbance and fluorescence detection. The results indicate that in spite of their similarity, the dissociation of the metal ion occurs with very different rates in the three complexes. During the course of the kinetic studies evidence was obtained for the occurrence of a photochemical process that leads to ligand degradation with the unexpected elimination of one CH2CH2 fragment from the macrocyclic core.

  18. Reversible dissociation and ligand-glutathione exchange reaction in binuclear cationic tetranitrosyl iron complex with penicillamine.

    PubMed

    Syrtsova, Lidia; Sanina, Natalia; Lyssenko, Konstantin; Kabachkov, Evgeniy; Psikha, Boris; Shkondina, Natal'ja; Pokidova, Olesia; Kotelnikov, Alexander; Aldoshin, Sergey

    2014-01-01

    This paper describes a comparative study of the decomposition of two nitrosyl iron complexes (NICs) with penicillamine thiolic ligands [Fe2(SC5H11NO2)2(NO)4]SO4 ·5H2O (I) and glutathione- (GSH-) ligands [Fe2(SC10H17N3O6)2(NO)4]SO4 ·2H2O (II), which spontaneously evolve to NO in aqueous medium. NO formation was measured by a sensor electrode and by spectrophotometric methods by measuring the formation of a hemoglobin- (Hb-) NO complex. The NO evolution reaction rate from (I)  k 1 = (4.6 ± 0.1)·10(-3) s(-1) and the elimination rate constant of the penicillamine ligand k 2 = (1.8 ± 0.2)·10(-3) s(-1) at 25°C in 0.05 M phosphate buffer,  pH 7.0, was calculated using kinetic modeling based on the experimental data. Both reactions are reversible. Spectrophotometry and mass-spectrometry methods have firmly shown that the penicillamine ligand is exchanged for GS(-) during decomposition of 1.5·10(-4) M (I) in the presence of 10(-3) M GSH, with 76% yield in 24 h. As has been established, such behaviour is caused by the resistance of (II) to decomposition due to the higher affinity of iron to GSH in the complex. The discovered reaction may impede S-glutathionylation of the essential enzyme systems in the presence of (I) and is important for metabolism of NIC, connected with its antitumor activity.

  19. Deposition of exchange-coupled dinickel complexes on gold substrates utilizing ambidentate mercapto-carboxylato ligands.

    PubMed

    Börner, Martin; Blömer, Laura; Kischel, Marcus; Richter, Peter; Salvan, Georgeta; Zahn, Dietrich R T; Siles, Pablo F; Fuentes, Maria E N; Bufon, Carlos C B; Grimm, Daniel; Schmidt, Oliver G; Breite, Daniel; Abel, Bernd; Kersting, Berthold

    2017-01-01

    The chemisorption of magnetically bistable transition metal complexes on planar surfaces has recently attracted increased scientific interest due to its potential application in various fields, including molecular spintronics. In this work, the synthesis of mixed-ligand complexes of the type [Ni(II)2L(L')](ClO4), where L represents a 24-membered macrocyclic hexaazadithiophenolate ligand and L' is a ω-mercapto-carboxylato ligand (L' = HS(CH2)5CO2(-) (6), HS(CH2)10CO2(-) (7), or HS(C6H4)2CO2(-) (8)), and their ability to adsorb on gold surfaces is reported. Besides elemental analysis, IR spectroscopy, electrospray ionization mass spectrometry (ESIMS), UV-vis spectroscopy, and X-ray crystallography (for 6 and 7), the compounds were also studied by temperature-dependent magnetic susceptibility measurements (for 7 and 8) and (broken symmetry) density functional theory (DFT) calculations. An S = 2 ground state is demonstrated by temperature-dependent susceptibility and magnetization measurements, achieved by ferromagnetic coupling between the spins of the Ni(II) ions in 7 (J = +22.3 cm(-1)) and 8 (J = +20.8 cm(-1); H = -2JS1S2). The reactivity of complexes 6-8 is reminiscent of that of pure thiolato ligands, which readily chemisorb on Au surfaces as verified by contact angle, atomic force microscopy (AFM) and spectroscopic ellipsometry measurements. The large [Ni2L] tail groups, however, prevent the packing and self-assembly of the hydrocarbon chains. The smaller film thickness of 7 is attributed to the specific coordination mode of the coligand. Results of preliminary transport measurements utilizing rolled-up devices are also reported.

  20. LigEvolutioner, a new strategy for modification and optimization of lead compounds in receptor/ligand complexes.

    PubMed

    Zhou, Peng; Tian, Feifei; Shang, Zhicai

    2008-12-01

    With the number of solved protein/ligand complex 3D structures growing up rapidly in recent years, lead modification and optimization based on the complex structure have received much attention in drug design community. In this study, we propose a novel method LigEvolutioner for the purpose of lead optimization in protein/ligand complexes. Using a fragment substitution strategy in the context of evolutionary algorithm, LigEvolutioner can analyze the complex structures automatically and derive several modification projects that could possibly improve the binding affinity of ligands. For instance, LigEvolutioner was employed to analyze and modify antigenic peptide ligand in human HLA-A*0201/peptide complexes and, as a result, a peptide analogue with potential high affinity was designed. The structure configuration of this modified peptide is consistent with crystal profile and antigen presenting theory. In addition, we have confirmed the validity of LigEvolutioner by systematically comparing it with several widely used scoring methods.

  1. Synthesis, Structures, and Reactions of Manganese Complexes Containing Diphosphine Ligands With Pendant Amines

    SciTech Connect

    Welch, Kevin D.; Dougherty, William G.; Kassel, W. S.; DuBois, Daniel L.; Bullock, R. Morris

    2010-10-01

    Addition of the pendant amine ligand PNRP (PNRP = Et2PCH2NRCH2PEt2; R = Me, Ph, n-Bu) to Mn(CO)5Br gives fac-Mn(PNRP)(CO)3Br. Photolysis of fac-Mn(PNRP)(CO)3Br with dppm [dppm = 1,2-bis(diphenylphosphino)methane] provides mixed bis(diphosphine) complexes, trans-Mn(PNRP)(dppm)(CO)(Br). Reaction of trans-Mn(PNRP)(dppm)(CO)(Br) with LiAlH4 leads to trans-Mn(PNRP)(dppm)(CO)(H). The crystal structure of trans-Mn(PNMeP)(dppm)(CO)(H) determined by x-ray diffraction shows an unusual distortion of the Mn-H towards one C-H of the dppm ligand, resulting in an H Mn CO angle of 155(1)° and C H • • • H Mn distance of 2.10(3) Å. Mn(P2PhN2Bn)(dppm)(CO)(H) [P2PhN2Bn = 1, 5-diphenyl-3,7-dibenzyl-1,5-diaza-3,7-diphosphacyclooctane] can be prepared in a similar manner; its structure has one chelate ring in a chair conformation and the second in a boat conformation. The boat-conformer ring directs the nitrogen of the ring towards the carbonyl ligand, and the N • • • C distance between one N of the P2PhN2Bn ligand and CO is 3.171(4) Å, indicating a weak interaction between the N of the pendant amine and the CO ligand. Reaction of NaBArF4 (ArF = = 3,5-bis(trifluoromethyl)phenyl) with Mn(P P)(dppm)(CO)(Br) produces the cations [Mn(P P)(dppm)(CO)]+. The crystal structure of [Mn(PNMeP)(dppm)(CO)][BArF4] shows two very weak agostic interactions between C-H bonds on the phenyl ring and the Mn. The cationic complexes [Mn(P P)(dppm)(CO)]+ react with H2 to form dihydrogen complexes [Mn(H2)(P P)(dppm)(CO)]+ (Keq = 1 - 90 atm-1 in fluorobenzene, for a series of different P P ligands). Similar equilibria with N2 produce [Mn(N2)(P P)(dppm)(CO)]+ (Keq generally 1-3.5 atm-1 in fluorobenzene). This work was supported by the US Department of Energy Basic Energy Sciences' Chemical Sciences, Geosciences & Biosciences Division. Pacific Northwest National Laboratory is operated by Battelle for the US Department of Energy.

  2. Ab initio study of phosphorescent emitters based on rare-earth complexes with organic ligands for organic electroluminescent devices.

    PubMed

    Freidzon, Alexandra Ya; Scherbinin, Andrei V; Bagaturyants, Alexander A; Alfimov, Michael V

    2011-05-12

    An ab initio approach is developed for calculation of low-lying excited states in Ln(3+) complexes with organic ligands. The energies of the ground and excited states are calculated using the XMCQDPT2/CASSCF approximation; the 4f electrons of the Ln(3+) ion are included in the core, and the effects of the core electrons are described by scalar quasirelativistic 4f-in-core pseudopotentials. The geometries of the complexes in the ground and triplet excited states are fully optimized at the CASSCF level, and the resulting excited states have been found to be localized on one of the ligands. The efficiency of ligand-to-lanthanide energy transfer is assessed based on the relative energies of the triplet excited states localized on the organic ligands with respect to the receiving and emitting levels of the Ln(3+) ion. It is shown that ligand relaxation in the excited state should be properly taken into account in order to adequately describe energy transfer in the complexes. It is demonstrated that the efficiency of antenna ligands for lanthanide complexes used as phosphorescent emitters in organic light-emitting devices can be reasonably predicted using the procedure suggested in this work. Hence, the best antenna ligands can be selected in silico based on theoretical calculations of ligand-localized excited energy levels.

  3. Synthesis, crystal structures and properties of three new mixed-ligand d{sup 10} metal complexes constructed from pyridinecarboxylate and in situ generated amino-tetrazole ligand

    SciTech Connect

    Liu Dongsheng; Huang, Xihe; Huang Changcang; Huang Gansheng; Chen Jianzhong

    2009-07-15

    Three new metal-organic frameworks, [Zn(atz)(nic)]{sub n}(1), [Zn(atz)(isonic)]{sub n}.nHisonic(2) and [Cd(atz)(isonic)]{sub n}(3) (Hnic=nicotinic acid, Hisonic=isonicotinic acid), have been firstly synthesized by employing mixed-ligand of pyridinecarboxylate with the in situ generated ligand of 5-amino-tetrazolate(atz{sup -}), and characterized by elemental analysis, IR spectroscopy, TGA and single crystal X-ray diffraction. The results revealed that 1 presents a two-dimensional (2D) 'sql' topological network constructed from the linear chain subunit of Zn(nic){sub 2} and atz{sup -} ligand. A remarkable feature of 2 is a 2-fold interpenetrated diamondoid network with free Hisonic molecules locating in the channels formed by the zigzag chain subunits of Zn(isonic){sub 2}. Complex 3 is a 3D non-interpenetrated pillared framework constructed from the double chain subunits of Cd-COO{sup -}Cd. It possesses a rarely observed (4,6)-connected 'fsc' topology. The thermal stabilities and fluorescent properties of the complexes were investigated. All of these complexes exhibited intense fluorescent emissions in the solid state at room temperature. - Graphical abstract: Three new mixed-ligand d{sup 10} metal complexes have been synthesized by employing mixed-ligand synthetic approach. Complex 1 presents a 2D 'sql' topological network. Complex 2 is a 2-fold interpenetrated diamondoid network with microporous channels. Rarely observed (4,6)-connected 'fsc' topological network was found in complex 3.

  4. Synthesis, characterization and antimicrobial activity of 3d transition metal complexes of a biambidentate ligand containing quinoxaline moiety.

    PubMed

    Anantha Lakshmi, P V; Reddy, P Saritha; Raju, V Jayatyaga

    2009-09-15

    A new series of oxovanadium(IV), chromium(III), manganese(II), iron(III), cobalt(II), nickel(II), and copper(II) complexes of the 3-hydrazino quinoxaline-2-one (HQO) were prepared and characterized. The ligand exhibits biambidenticity. It behaves as a bidentate ON donor in oxovanadium(IV), iron(III) and copper(II) complexes and as a bis bidentate ONNN donor in chromium(III), manganese(II), cobalt(II) and nickel(II) complexes. The nature of bonding and the stereochemistry of the complexes have been deduced from elemental analyses, thermal, infrared, (1)H NMR, electronic spectra, magnetic susceptibility and conductivity measurements. An octahedral geometry was suggested for all the complexes. All the complexes show subnormal magnetic moments. The ligand, HQO, and its complexes were tested against one strain Gram +ve bacteria (Staphylococcus aureus), Gram -ve bacteria (Escherichia coli). The prepared metal complexes exhibited higher antimicrobial activities than the parent ligand.

  5. First fluorescence spectroscopic investigation of Am(III) complexation with an organic carboxylic ligand, pyromellitic acid

    NASA Astrophysics Data System (ADS)

    Barkleit, Astrid; Geipel, Gerhard; Acker, Margret; Taut, Steffen; Bernhard, Gert

    2011-01-01

    For the first time Am(III) complexation with a small organic ligand could be identified and characterized with time-resolved laser-induced fluorescence spectroscopy (TRLFS) at room temperature and trace metal concentration. With pyromellitic acid (1,2,4,5-benzene-tetracarboxylic acid, BTC) as ligand spectroscopic characteristics for the Am-BTC complex system were determined at pH 5.0, an ionic strength of 0.1 M (NaClO 4) and room temperature. The fluorescence lifetimes were determined to be 23.2 ± 2.2 ns for Am 3+(aq) and 27.2 ± 1.2 ns for the Am-BTC 1:1 complex; the emission maximum for the 5D 1- 7F 1 transition is 691 nm for both species. The complex stability constant for the Am-BTC 1:1 complex was calculated to be log β110 = 5.42 ± 0.16.

  6. First fluorescence spectroscopic investigation of Am(III) complexation with an organic carboxylic ligand, pyromellitic acid.

    PubMed

    Barkleit, Astrid; Geipel, Gerhard; Acker, Margret; Taut, Steffen; Bernhard, Gert

    2011-01-01

    For the first time Am(III) complexation with a small organic ligand could be identified and characterized with time-resolved laser-induced fluorescence spectroscopy (TRLFS) at room temperature and trace metal concentration. With pyromellitic acid (1,2,4,5-benzene-tetracarboxylic acid, BTC) as ligand spectroscopic characteristics for the Am-BTC complex system were determined at pH 5.0, an ionic strength of 0.1 M (NaClO4) and room temperature. The fluorescence lifetimes were determined to be 23.2±2.2 ns for Am3+(aq) and 27.2±1.2 ns for the Am-BTC 1:1 complex; the emission maximum for the 5D1-(7)F1 transition is 691 nm for both species. The complex stability constant for the Am-BTC 1:1 complex was calculated to be logβ110=5.42±0.16.

  7. Multiple complexation of CO and related ligands to a main-group element

    NASA Astrophysics Data System (ADS)

    Braunschweig, Holger; Dewhurst, Rian D.; Hupp, Florian; Nutz, Marco; Radacki, Krzysztof; Tate, Christopher W.; Vargas, Alfredo; Ye, Qing

    2015-06-01

    The ability of an atom or molecular fragment to bind multiple carbon monoxide (CO) molecules to form multicarbonyl adducts is a fundamental trait of transition metals. Transition-metal carbonyl complexes are vital to industry, appear naturally in the active sites of a number of enzymes (such as hydrogenases), are promising therapeutic agents, and have even been observed in interstellar dust clouds. Despite the wealth of established transition-metal multicarbonyl complexes, no elements outside groups 4 to 12 of the periodic table have yet been shown to react directly with two or more CO units to form stable multicarbonyl adducts. Here we present the synthesis of a borylene dicarbonyl complex, the first multicarbonyl complex of a main-group element prepared using CO. The compound is additionally stable towards ambient air and moisture. The synthetic strategy used--liberation of a borylene ligand from a transition metal using donor ligands--is broadly applicable, leading to a number of unprecedented monovalent boron species with different Lewis basic groups. The similarity of these compounds to conventional transition-metal carbonyl complexes is demonstrated by photolytic liberation of CO and subsequent intramolecular carbon-carbon bond activation.

  8. Nickel Complexes of a Binucleating Ligand Derived from an SCS Pincer

    SciTech Connect

    Peterson, Sonja M.; Helm, Monte L.; Appel, Aaron M.

    2015-01-01

    A binucleating ligand has been prepared that contains an SCS pincer and three oxygen donor ligands in a partial crown ether loop. To enable metalation with Ni0, a bromoarene precursor was used and resulted in the formation of a nickel-bromide complex in the SCS pincer. Reaction of the nickel complex with a lithium salt yielded a heterobimetallic complex with bromide bridging the two metal centers. The solid-state structures were determined for this heterobimetallic complex and the nickel-bromide precursor, and the two complexes were characterized electrochemically to determine the influence of coordinating the second metal. This research was supported by the US Department of Energy, Office of Basic Energy Sciences, Division of Chemical Sciences, Geosciences & Biosciences. MLH was supported as part of the Center for Molecular Electrocatalysis, an Energy Frontier Research Center funded by the U.S. Department of Energy, Office of Science. Pacific Northwest National Laboratory (PNNL) is a multiprogram national laboratory operated for DOE by Battelle.

  9. Titanium imido complexes utilizing orthometallated derivatized acetophenone and piperonal imine ligands: synthesis, isolation, and characterization.

    PubMed

    Beck, John F; Baiz, Tamam I; Neshat, Abdollah; Schmidt, Joseph A R

    2009-07-07

    A series of five ortho-lithiated imines (Li-L(n); n = 1-5) was synthesized via the reaction of an aryl or alkyl acetophenone imine with n-butyllithium. The ortho-lithiated imines were subsequently reacted with Ti(NR)Cl(2)py(3) (R = C(CH(3))(3), 2,6-Me(2)C(6)H(3), 2,6-Et(2)C(6)H(3), or 2,6-(i)Pr(2)C(6)H(3)), yielding complexes of the form (L(n))(2)Ti(NR). Several of the resulting complexes [(L(1))(2)Ti(NC(CH(3))(3)), 1a; (L(3))(2)Ti(N-2,6-Me(2)C(6)H(3)), 3b; and (L(5))(2)Ti(NC(CH(3))(3)), 5a] were structurally characterized using small molecule X-ray diffraction. The C(2) symmetric complexes produced in these reactions displayed a distorted square pyramidal geometry. In each complex the titanium center was located above the square plane of the two coordinated bidentate ligands and the chelating C approximately N ligands were folded away from the metal center. When a less sterically demanding alkylimine was used (L(4)), the resulting complex was isolated as an equilibrium mixture of cis and trans isomers of the empirical formula (L(4))(2)Ti(NC(CH(3))(3))py (cis/trans 4a).

  10. Synthesis, structure and luminescence properties of lanthanide complex with a new tetrapodal ligand featuring salicylamide arms

    SciTech Connect

    Song Xueqin; Wen Xiaoguang; Liu Weisheng; Wang Daqi

    2010-01-15

    A new tetrapodal ligand 1,1,1-tetrakis{l_brace}[(2'-(2-furfurylaminoformyl))phenoxyl]methyl{r_brace}methane (L) has been prepared and their coordination chemistry with Ln{sup III} ions has been investigated. The structure of {l_brace}[Ln{sub 4}L{sub 3}(NO{sub 3}){sub 12}].H{sub 2}O{r_brace}{sub i}nfinity (Ln=Nd, Eu)] shows the binodal 4,3-connected three-dimensional interpenetration coordination polymers with topology of a (8{sup 6}){sub 3}(8{sup 3}){sub 4} notation. [DyL(NO{sub 3}){sub 3}(H{sub 2}O){sub 2}].0.5CH{sub 3}OH and [ErL(NO{sub 3}){sub 3}(H{sub 2}O) (CH{sub 3}OH)].CH{sub 3}COCH{sub 3} is a 1:1 mononuclear complex with interesting supramolecular features. The structure of [NdL(H{sub 2}O){sub 6}].3ClO{sub 4}.3H{sub 2}O is a 2:1 mononuclear complex which further self-assembled through hydrogen bond to form a three-dimensional supramolecular structures. The result presented here indicates that both subtle variation of the terminal group and counter anions can be applied in the modulation of the overall molecular structures of lanthanide complex of salicylamide derivatives due to the structure specialties of this type of ligand. The luminescence properties of the Eu{sup III} complex are also studied in detail. - Grapical Abstract: We present here a series of zero- to three-dimensional lanthanide coordination structures and luminescence properties of Eu(III) complex of a new tetrapodal ligand.

  11. Coordination chemistry and reactivity of zinc complexes supported by a phosphido pincer ligand.

    PubMed

    D'Auria, Ilaria; Lamberti, Marina; Mazzeo, Mina; Milione, Stefano; Roviello, Giuseppina; Pellecchia, Claudio

    2012-02-20

    The preparation and characterization of new Zn(II) complexes of the type [(PPP)ZnR] in which R = Et (1) or N(SiMe(3))(2) (2) and PPP is a tridentate monoanionic phosphido ligand (PPP-H = bis(2-diphenylphosphinophenyl)phosphine) are reported. Reaction of ZnEt(2) and Zn[N(SiMe(3))(2)](2) with one equivalent of proligand PPP-H produced the corresponding tetrahedral zinc ethyl (1) and zinc amido (2) complexes in high yield. Homoleptic (PPP)(2) Zn complex 3 was obtained by reaction of the precursors with two equivalents of the proligand. Structural characterization of 1-3 was achieved by multinuclear NMR spectroscopy ((1)H, (13)C, and (31)P) and X-ray crystallography (3). Variable-temperature (1)H and (31)P NMR studies highlighted marked flexibility of the phosphido pincer ligand in coordination at the metal center. A DFT calculation on the compounds provided theoretical support for this behavior. The activities of 1 and 2 toward the ring-opening polymerization of ε-caprolactone and of L- and rac-lactide were investigated, also in combination with an alcohol as external chain-transfer agent. Polyesters with controlled molecular parameters (M(n), end groups) and low polydispersities were obtained. A DFT study on ring-opening polymerization promoted by these complexes highlighted the importance of the coordinative flexibility of the ancillary ligand to promote monomer coordination at the reactive zinc center. Preliminary investigations showed the ability of these complexes to promote copolymerization of L-lactide and ε-caprolactone to achieve random copolymers whose microstructure reproduces the composition of the monomer feed.

  12. Cobalt complexes of terpyridine ligand: crystal structure and photocleavage of DNA.

    PubMed

    Indumathy, Ramasamy; Radhika, Srinivasan; Kanthimathi, Mookandi; Weyhermuller, T; Unni Nair, Balachandran

    2007-03-01

    Two new cobalt complexes, [Co(pytpy)(2)](ClO(4))(2), 1, and [Co(pytpy)(2)](ClO(4))(3), 2 where pytpy=pyridine terpyridine, have been synthesized and characterized. Single-crystal X-ray structure of both the complexes has been resolved. The structure shows the complexes to be a monomeric cobalt(II) and cobalt(III) species with two pytpy ligands coordinated to the metal ion to give a six coordinate complex. Both cobalt(II) and cobalt(III) complexes crystallize in meridional configuration. The interaction of these complexes with calf thymus DNA has been explored by using absorption, emission spectral, electrochemical studies and viscosity measurements. From the experimental results the DNA binding constants of 1 and 2 are found to be (1.97+/-0.15)x10(4)M(-1) and (2.7+/-0.20)x10(4)M(-1) respectively. The ratio of DNA binding constants of 1 and 2 have been estimated to be 0.82 from electrochemical studies, which is in close agreement with the value of 0.73 obtained from spectral studies. The observed changes in viscosity of DNA in the presence of increasing amount of complexes 1 and 2 suggest intercalating binding of these complexes to DNA. Results of DNA cleaving experiments reveal that complex 2 efficiently cleaves DNA under photolytic conditions while complex 1 does not cleave DNA under similar conditions.

  13. The Role of Ligand Topology in the Decomplexation of Luminescent Lanthanide Complexes by Dipicolinic Acid.

    PubMed

    Mian, Federica; Bottaro, Gregorio; Seraglia, Roberta; Cavazzini, Marco; Quici, Silvio; Armelao, Lidia

    2016-10-18

    In this study, we present the aqueous solution behavior of two luminescent lanthanide antenna complexes (Eu(3+) ⊂1, Dy(3+) ⊂9) with different ligand topologies in the presence of dipicolinic acid (DPA, pyridine-2,6-dicarboxylic acid). Macrocyclic (1,4,7,10-tetraazacyclododecane-1,4,7-triacetic acid, DO3A, 9) and acyclic (1,4,7-triazaheptane-1,1,7,7-tetraacetic acid, DTTA, 1) ligands have been selected to form a ratiometric pair in which Dy(3+) ⊂9 acts as a reference and Eu(3+) ⊂1 acts as a probe for the recognition of DPA. The pair of luminescent complexes in water reveals the capability to work as a DPA luminescent sensor. The change of emission intensity of Eu(3+) indicates the occurrence of a new sensitization path for the lanthanide cation through excitation of DPA. NMR evidence implies the presence of free 1 and mass spectrometry shows the formation of emitting [EuDPA2 ](-) as a result of a ligand exchange reaction.

  14. Equilibria of mononuclear oxomolybdenum(VI) complexes of triethanolamine. A multinuclear dynamic magnetic resonance study of structure and exchange mechanisms.

    PubMed

    Szalontai, Gábor; Kiss, Gábor; Bartha, László

    2003-07-01

    1D and 2D 1H and 13C NMR spectra of the assumed [MoO(4)(TEA)](2-) complex recorded in DMSO at variable temperatures clearly indicate one free and two bound hydroxyethyl arms. The free arm of the ligand readily exchanges with the two metal-bound arms. Under such conditions the triethanolamine (TEA) acts as a bidentate ligand. The presence of water accelerates the exchange, which at higher water content involves the free ligand too. In organic solvents the binding strength of the hydroxo groups to the molybdenum is weaker than that of the water molecules. A plausible structure is confirmed by 14N, 17O and 95Mo measurements and an exchange mechanism based on the existence of an eight-membered relatively rigid chelate ring is suggested.

  15. Effect of ionic strength on ligand exchange kinetics between a mononuclear ferric citrate complex and siderophore desferrioxamine B

    NASA Astrophysics Data System (ADS)

    Ito, Hiroaki; Fujii, Manabu; Masago, Yoshifumi; Waite, T. David; Omura, Tatsuo

    2015-04-01

    The effect of ionic strength (I) on the ligand exchange reaction between a mononuclear ferric citrate complex and the siderophore, desferrioxamine B (DFB), was examined in the NaCl concentration range of 0.01-0.5 M, particularly focusing on the kinetics and mechanism of ligand exchange under environmentally relevant conditions. Overall ligand exchange rate constants were determined by spectrophotometrically measuring the time course of ferrioxamine B formation at a water temperature of 25 °C, pH 8.0, and citrate/Fe molar ratios of 500-5000. The overall ligand exchange rate decreased by 2-11-fold (depending on the citrate/Fe molar ratios) as I increased from approximately 0.01 to 0.5 M. In particular, a relatively large decrease was observed at lower I (<0.1 M). A ligand exchange model describing the effect of I on the ligand exchange rate via disjunctive and adjunctive pathways was developed by considering the pseudo-equilibration of ferric citrate complexes and subsequent ferrioxamine formation on the basis of the Eigen-Wilkins metal-ligand complexation theory. The model and experimental data consistently suggest that the adjunctive pathway (i.e., direct association of DFB with ferric mono- and di-citrate complexes following dissociation of citrate from the parent complexes) dominates in ferrioxamine formation under the experimental conditions used. The model also predicts that the higher rate of ligand exchange at lower I is associated with the decrease in the ferric dicitrate complex stability because of the relatively high electrical repulsion between ferric monocitrate and free citrate at lower I (note that the reactivity of ferric dicitrate with DFB is smaller than that for the monocitrate complex). Overall, the findings of this study contribute to the understanding of the potential effect of I on ligand exchange kinetics in natural waters and provide fundamental knowledge on iron transformation and bioavailability.

  16. Chemistry of Nitrosyl Iron Complexes Supported by a β-Diketiminate Ligand

    PubMed Central

    Tonzetich, Zachary J.; Héroguel, Florent; Do, Loi H.; Lippard, Stephen J.

    2011-01-01

    Several nitrosyl complexes of Fe and Co have been prepared using the sterically hindered Ar-nacnac ligand (Ar-nacnac = anion of [(2,6-diisopropylphenyl)NC(Me)]2CH). The dinitrosyl iron complexes, [Fe(NO)2(Ar-nacnac)] (1) and (Bu4N)[Fe(NO)2(Ar-nacnac)] (2) react with [FeIII(TPP)Cl] (TPP = tetraphenylporphine dianion) to generate [FeII(TPP)(NO)] and the corresponding mononitrosyl iron complexes. The factors governing NO-transfer with DNICs 1 and 2 are evaluated, together with the chemistry of the related mononitrosyl iron complex, [Fe(NO)Br(Ar-nacnac)], 4. The synthesis and properties of the related cobalt dinitrosyl [Co(NO)2(Ar-nacnac)], 3, is also discussed for comparison to DNICs 1 and 2. The solid-state structures of several of these compounds as determined by X-ray crystallography are reported. PMID:21244036

  17. Azido, triazolyl, and alkynyl complexes of gold(I): syntheses, structures, and ligand effects.

    PubMed

    Robilotto, Thomas J; Deligonul, Nihal; Updegraff, James B; Gray, Thomas G

    2013-08-19

    Gold(I) triazolyl complexes are prepared in [3 + 2] cycloaddition reactions of (tertiary phosphine)gold(I) azides with terminal alkynes. Seven such triazolyl complexes, not previously prepared, are described. Reducible functional groups are accommodated. In addition, two new (N-heterocyclic carbene)gold(I) azides and two new gold(I) alkynyls are described. Eight complexes are crystallographically authenticated; aurophilic interactions appear in one structure only. The packing diagrams of gold(I) triazolyls all show intermolecular hydrogen bonding between N-1 of one molecule and N-3 of a neighbor. This hydrogen bonding permeates the crystal lattice. Density-functional theory calculations of (triphenylphosphine)gold(I) triazolyls and the corresponding alkynyls indicate that the triazolyl is a stronger trans-influencer than is the alkynyl, but the alkynyl is more electron-releasing. These results suggest that trans-influences in two-coordinate gold(I) complexes can be more than a simple matter of ligand donicity.

  18. [Contribution of enthalpy to the energetics of complex formation of aromatic ligands with DNA].

    PubMed

    Kostiukov, V V; Khomutova, N M; Evstigneev, M P

    2011-01-01

    The energy contributions of electrostatic, van der Waals interactions, hydrogen bonds, and interactions of charge transfer type to the enthalpy of complex formation of the double-stand DNA with the antitumor antibiotics daunomycin, nogalamycin, and novantron, as well as the mutagens ethidium bromide and proflavine have been calculated. According to the calculations, the van der Waals component (except for nogalamycin) is energetically favorable during complex formation of the antibiotics with DNA, and the contributions of H bonds and electrostatic interactions are unfavorable, with the probability of charge transfer in the complexes being low. It has been shown that the relatively low value of the experimental enthalpy of binding is the sum of components greater in absolute value and different in the sign, which is the cause of large errors in estimating the total enthalpy of complex formation of aromatic ligands with DNA.

  19. Vanadium(iv and v) complexes of pyrazolone based ligands: Synthesis, structural characterization and catalytic applications.

    PubMed

    Maurya, Mannar R; Sarkar, Bithika; Avecilla, Fernando; Correia, Isabel

    2016-11-01

    The ONO donor ligands obtained from the condensation of 4-benzoyl-3-methyl-1-phenyl-2-pyrazoline-5-one (Hbp) with benzoylhydrazide (H2bp-bhz I), furoylhydrazide (H2bp-fah II), nicotinoylhydrazide (H2bp-nah III) and isonicotinoylhydrazide (H2bp-inh IV), upon treatment with [V(IV)O(acac)2], lead to the formation of [V(IV)O(bp-bhz)(H2O)] 1, [V(IV)O(bp-fah)(H2O)] 2, [V(IV)O(bp-nah)(H2O)] 3 and [V(IV)O(bp-inh)(H2O)] 4, respectively. At neutral pH the in situ generated aqueous K[H2V(V)O4] reacts with ligands I and II, forming potassium salts, K(H2O)2[V(V)O2(bp-bhz)] 5 and K(H2O)2[V(V)O2(bp-fah)] 6, while ligands III and IV give neutral complexes, [V(V)O2(Hbp-nah)] 9 and [V(V)O2(Hbp-inh)] 10, respectively. Acidification of aqueous solutions of 5 and 6 with HCl also gives neutral complexes [V(V)O2(Hbp-bhz)] 7 and [V(V)O2(Hbp-fah)] 8, respectively. Complexes 1-4, upon slow aerial oxidation in methanol, convert into monooxidovanadium(v) complexes, [V(V)O(bp-bhz)(OMe)] 11, [V(V)O(bp-fah)(OMe)] 12, [V(V)O(bp-nah)(OMe)] 13 and [V(V)O(bp-inh)(OMe)] 14, respectively. All complexes were characterized by various spectroscopic techniques like FT-IR, UV-visible, EPR (for complexes 1-4) and NMR ((1)H, (13)C and (51)V), elemental analysis, thermogravimetry and single crystal X-ray diffraction (for complexes 5-10 and 12). In the solid state, all complexes characterized by X-ray diffraction show the metal ion 5-coordinated in a distorted square pyramidal geometry. Complexes 11-14 were tested as catalysts for the one-pot three-component (ethylacetoacetate, benzaldehyde and ammonium acetate) dynamic covalent assembly, via Hantzsch reaction, using hydrogen peroxide as oxidant in solution and under solvent-free conditions. The complexes are also active catalysts for the oxidation of tetralin to tetralone with H2O2 as oxidant. The influence of the amounts of catalyst and oxidant, and solvent, temperature and time on the catalyzed reactions was investigated.

  20. The pyridyl group in ligand design for selective metal ion complexation and sensing.

    PubMed

    Hancock, Robert D

    2013-02-21

    Factors in polypyridyl ligands that control their thermodynamic metal ion selectivity in aqueous solution, and their use in selective fluorescent sensing, are examined. Preorganization of polypyridyl ligands ranging from bidentate to tetradentate by bridging benzo groups, as are present in 1,10-phenanthroline (phen) compared to 2,2'-bipyridyl (bpy), is discussed. The role of solvation is considered in relation to the relative affinity of ligands containing pyridyl groups for divalent and trivalent metal ions in aqueous solution. The effects of steric clashes between H atoms on polypyridyl ligands in decreasing complex stability are evaluated, as well as the effect of chelate ring size on metal ion selectivity. Phen ligands with other donor groups present at the 2 and 9 positions, such as alcohols, amides, carboxylates, and oximes are discussed. The design of pyridyl-based ligands for the separation of Am(III) from lanthanide(III) ions is considered, as well as ligands for the removal of metal ions such as Cu(II) or Zn(II) in neurological diseases such as Alzheimer's. The design of pyridyl-based fluorescent sensors for selective sensing of metal ions is examined in terms of the role of spin-orbit coupling constants (ζ), paramagnetism, and steric effects in the development of selective fluorescent sensors that operate via chelation enhanced fluorescence (CHEF). It is concluded that for lighter metal ions with smaller ζ values such as Zn(II) and Ca(II), and to a lesser extent Cd(II), that the CHEF effect can be achieved with pyridyl-containing fluorophores that coordinate directly to the metal ion. The way in which steric effects can be used to decrease the CHEF effect in Zn(II) relative to Cd(II) to enable selective sensing of the latter is analyzed. For heavier metal ions such as Hg(II) and Pb(II), because of their large ζ values which quench fluorescence, it is concluded that the fluorophore should be tethered to the metal-binding part of the sensor, and

  1. Synthesis and Reactivity of a Bio-inspired Dithiolene Ligand and its Mo Oxo Complex.

    PubMed

    Porcher, Jean-Philippe; Fogeron, Thibault; Gomez-Mingot, Maria; Chamoreau, Lise-Marie; Li, Yun; Fontecave, Marc

    2016-03-18

    An original synthesis of the fused pyranoquinoxaline dithiolene ligand qpdt(2-) is discussed in detail. The most intriguing step is the introduction of the dithiolene moiety by Pd-catalyzed carbon-sulfur coupling. The corresponding Mo(IV)O complex (Bu4N)2 [MoO(qpdt)2] (2) underwent reversible protonation in a strongly acidic medium and remained stable under anaerobic conditions. Besides, 2 was found to be very sensitive towards oxygen, as upon oxidation it formed a planar dithiin derivative. Moreover, the qpdt(2-) ligand in the presence of [MoCl4 (tBuNC)2] formed a tetracyclic structure. The products resulting from the unique reactivity of qpdt(2-) were characterized by X-ray diffraction, mass spectrometry, NMR spectroscopy, UV/Vis spectroscopy, and electrochemistry. Plausible mechanisms for the formation of these products are also proposed.

  2. A ligand-independent integrin β1 mechanosensory complex guides spindle orientation

    PubMed Central

    Petridou, Nicoletta I.; Skourides, Paris A.

    2016-01-01

    Control of spindle orientation is a fundamental process for embryonic development, morphogenesis and tissue homeostasis, while defects are associated with tumorigenesis and other diseases. Force sensing is one of the mechanisms through which division orientation is determined. Here we show that integrin β1 plays a critical role in this process, becoming activated at the lateral regions of the cell cortex in a ligand-independent manner. This activation is force dependent and polar, correlating with the spindle capture sites. Inhibition of integrin β1 activation on the cortex and disruption of its asymmetric distribution leads to spindle misorientation, even when cell adhesion is β1 independent. Examining downstream targets reveals that a cortical mechanosensory complex forms on active β1, and regulates spindle orientation irrespective of cell context. We propose that ligand-independent integrin β1 activation is a conserved mechanism that allows cell responses to external stimuli. PMID:26952307

  3. A Bulky m-Terphenyl Cyclopentadienyl Ligand and Its Alkali-Metal Complexes.

    PubMed

    Veinot, Alex J; Todd, Angela D K; Masuda, Jason D

    2017-09-11

    The synthesis of the new m-terphenyl-substituted cyclopentadienyl ligand precursor 1-cyclopentadiene-2,6-bis(2,4,6-trimethylphenyl)benzene (Ter(Mes) CpH) is described. The synthesis proceeds through the reaction of Ter(Mes) Li with cobaltocenium iodide, followed by oxidation of the intermediate cobalt(I) species to give the corresponding cyclopentadiene as a mixture of isomers. The preparation and spectroscopic properties of the alkali-metal salts (Li-Cs) is described, as well as structural information obtained by X-ray diffraction studies for the lithium, potassium, and cesium analogues. Crystallographic data demonstrate the ability of these new ligands to act as monoanionic chelates by forming metal complexes with Cp-M-Ar bonding environments. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  4. Oxidation of cyclohexane by high-valent iron bispidine complexes: tetradentate versus pentadentate ligands.

    PubMed

    Comba, Peter; Maurer, Martin; Vadivelu, Prabha

    2009-11-02

    The iron-bispidine-catalyzed oxidation of cyclohexane with H(2)O(2), where either a tetradentate or a pentadentate bispidine ligand is coordinated to the iron center, yields up to 35% cyclohexanol and cyclohexanone (alcohol/ketone ratio of up to 4). Product distribution (including (18)O labeling studies), kinetic isotope effects, and the ratio of tertiary/secondary alcohols with adamantane as a substrate (tertiary/secondary) suggest that (i) H abstraction by a ferryl complex is the rate-determining step and that the emerging cyclohexyl radical is short-lived, (ii) there is a parallel reaction involving oxidation by OH radicals, and (iii) there are considerable differences in the reaction pathways between the tetradentate and pentadentate ligand catalyst. These interpretations are fully supported by a DFT-based computational analysis.

  5. Synthesis and luminescence properties of polymer-rare earth complexes containing salicylaldehyde-type bidentate Schiff base ligand.

    PubMed

    Zhang, Dandan; Gao, Baojiao; Li, Yanbin

    2017-01-24

    Using molecular design and polymer reactions, two types of bidentate Schiff base ligands, salicylaldehyde-aniline (SAN) and salicylaldehyde-cyclohexylamine (SCA), were synchronously synthesized and bonded onto the side chain of polysulfone (PSF), giving two bidentate Schiff base ligand-functionalized PSFs, PSF-SAN and PSF-SCA, referred to as macromolecular ligands. Following coordination reactions between the macromolecular ligands and Eu(III) and Tb(III) ions (the reaction occurred between the bonded ligands SAN or SCA and the lanthanide ion), two series of luminescent polymer-rare earth complexes, PSF-SAN-Eu(III) and PSF-SCA-Tb(III), were obtained. The two macromolecular ligands were fully characterized by Fourier transform infrared (FTIR), (1) H NMR and UV absorption spectroscopy, and the prepared complexes were also characterized by FTIR, UV absorption spectroscopy and thermo-gravity analysis. On this basis, the photoluminescence properties of these complexes and the relationships between their structure and luminescence were investigated in depth. The results show that the bonded bidentate Schiff base ligands, SAN and SCA, can effectively sensitize the fluorescence emission of Eu(III) and Tb(III) ions, respectively. PSF-SAN-Eu(III) series complexes, namely the binary complex PSF-(SAN)3 -Eu(III) and the ternary complex PSF-(SAN)3 -Eu(III)-(Phen)1 (Phen is the small-molecule ligand 1,10-phenanthroline), produce strong red luminescence, suggesting that the triplet state energy level of SAN is lower and well matched with the resonant energy level of the Eu(III) ion. By contrast, PSF-SAN-Eu(III) series complexes, namely the binary complex PSF-(SCA)3 -Tb(III) and the ternary complex PSF-(SCA)3 -Tb(III)-(Phen)1 , display strong green luminescence, suggesting that the triplet state energy level of SCA is higher and is well matched with the resonant energy level of Tb(III).

  6. Optoelectronic Properties of Color-Tunable Mixed Ligand-Based Light-Emitting Zinc Complexes

    NASA Astrophysics Data System (ADS)

    Singh, Devender; Bhagwan, Shri; Saini, Raman Kumar; Tanwar, Vijeta; Nishal, Vandna

    2016-10-01

    A series of mixed ligand-based zinc complexes (Zn1-Zn5); [(8-hydroxyquinolinato)(2-(2-hydroxyphenyl)benzimidazolato)zinc(II)] (Zn1), [(5-chloro-8-hydroxyquinolinato)(2-(2-hydroxyphenyl)benzimidazolato)zinc(II)] (Zn2), [(5,7-dichloro-8-hydroxyquinolinato)(2-(2-hydroxyphenyl)benzimidazolato)zinc(II)] (Zn3), [(2-methyl-8-hydroxyquinolinato)(2-(2-hydroxyphenyl)benzimidazolato)zinc(II)] (Zn4) and [(5,7-dimethyl-8-hydroxyquinolinato)(2-(2-hydroxyphenyl)benzimidazolato)zinc(II)] (Zn5) were synthesized and characterized. The photophysical properties of zinc complexes were examined by ultraviolet-visible absorption and photoluminescence emission spectroscopy. All prepared metal complexes produced intense luminescence on excitation with a UV light source. In this study, the color-tunable characteristics of metal complexes were investigated by introducing the electron-donating and electron-withdrawing groups on the 8-hydroxyquinoline ligand. The emission spectra of metal complexes showed emission wavelength at 500 nm for [ZnHBI(q)], 509 nm for [ZnHBI(Clq)], 504 nm for [Zn(HBI)(Cl2q)], 496 nm for [ZnHBI (Meq)] and 573 nm for [ZnHBI(Me2Q)] materials. A temperature-dependent PL spectrum was used to study the emission profile of zinc complex and observed that variation in the temperature altered the position and the intensity of emission peak. The synthesized metal complex also exhibited good thermal stability (>300°C). Photophysical characteristics of color-tunable light-emitting zinc complexes suggested that these materials could be efficiently used for emissive display device applications.

  7. Synthesis, NMR spectral and structural studies on mixed ligand complexes of Pd(II) dithiocarbamates: First structural report on palladium(II) dithiocarbamate with SCN-ligand

    NASA Astrophysics Data System (ADS)

    Prakasam, Balasubramaniam Arul; Lahtinen, Manu; Peuronen, Anssi; Muruganandham, Manickavachagam; Kolehmainen, Erkki; Haapaniemi, Esa; Sillanpää, Mika

    2016-03-01

    Three new mixed ligand complexes of palladium(II) dithiocarbamates; [Pd(4-dpmpzdtc)(PPh3)(SCN)] (1), [Pd(4-dpmpzdtc)(PPh3)Cl] (2) and [Pd(bzbudtc)(PPh3)Cl] (3), (where, 4-dpmpzdtc = 4-(diphenylmethyl)piperazinecarbodithioato anion, bzbudtc = N-benzyl-N-butyldithiocarbamato anion and PPh3 = triphenylphosphine) have been synthesized from their respective parent dithiocarbamates by ligand exchange reactions and characterized by IR and NMR (1H, 13C and 31P) spectroscopy. IR and NMR spectral data support the isobidentate coordination of the dithiocarbamate ligands in all complexes (1-3) in solid and in solution, respectively. Single crystal diffraction analysis of complexes 1-3 evidences that all three complexes are exhibiting distorted square planar geometry. The Pd-S distances in 1-3 vary in accordance with the differences in trans influences of PPh3, SCN- and Cl- and it is in the order of PPh3 > SCN- > and Cl-. Interchange of the anionic auxiliary ligand (SCN- to Cl-) induces asymmetry to the dithiocarbamate-metal bonds. Thioureide C-N bond distances are short in 1-3, supporting a contribution of thioureide form to the structures. The observed distortions in the square planar geometry for 1-3, are in the order of 1 > 2 > 3.

  8. Multifunctional DNA interactions of Ru-Pt mixed metal supramolecular complexes with substituted terpyridine ligands.

    PubMed

    Jain, Avijita; Wang, Jing; Mashack, Emily R; Winkel, Brenda S J; Brewer, Karen J

    2009-10-05

    The coupling of a light absorbing unit to a bioactive site allows for the development of supramolecules with multifunctional interactions with DNA. A series of mixed metal supramolecular complexes that couple a DNA-binding cis-Pt(II)Cl(2) center to a ruthenium chromophore via a polyazine bridging ligand have been prepared, and their DNA interactions have been studied, [(TL)RuCl(dpp)PtCl(2)](PF(6)) (TL = tpy (2,2':6',2''-terpyridine), MePhtpy (4'-(4-methylphenyl)-2,2':6',2''-terpyridine), or (t)Bu(3)tpy (4,4',4''-tri-tert-butyl-2,2':6',2''-terpyridine and dpp = 2,3-bis(2-pyridyl)pyrazine). This series provides for unique tridentate coordinated Ru(II) systems to photocleave DNA with preassociation with the DNA target via coordination of the Pt(II) center. Electronic absorption spectroscopy of the complexes displays intense ligand-based pi-->pi* transitions in the UV region and metal to ligand charge transfer (MLCT) transitions in the visible region. The Ru(dpi)-->dpp(pi*) MLCT transitions occur at 545 nm, red-shifted relative to the 520 nm maxima for the monometallic synthons, [(TL)RuCl(dpp)](PF(6)). The title RuPt complexes display reversible Ru(II/III) oxidative couples at 1.10, 1.10, and 1.01 V vs Ag/AgCl for TL = tpy, MePhtpy, and (t)Bu(3)tpy, respectively. The TL(0/-) reduction occurred at -1.43, -1.44, and -1.59 V vs Ag/AgCl for TL = tpy, MePhtpy, and (t)Bu(3)tpy, respectively. These complexes display a dpp(0/-) couple (-0.50 -0.55, and -0.59 V) significantly shifted to positive potential relative to their monometallic synthons (-1.15, -1.16, and -1.22 V), consistent with the bridging coordination of the dpp ligand. Coupling of (TL)Ru(II)Cl(BL) subunit to a cis-Pt(II)Cl(2) site provides for the application of photochemically inactive Ru(II)(tpy)-based chromophores in DNA photocleavage applications. The [(TL)RuCl(dpp)PtCl(2)](+) complexes display covalent binding to DNA and photocleavage upon irradiation with visible light modulated by TL identity. The redox

  9. Synthesis, Characterization, DNA Interaction, and Antitumor Activities of La (III) Complex with Schiff Base Ligand Derived from Kaempferol and Diethylenetriamine

    PubMed Central

    Wang, Qin; Huang, Yu; Zhang, Jin-Sheng; Yang, Xin-Bin

    2014-01-01

    A novel La (III) complex, [LaL(H2O)3]NO3·3H2O, with Schiff base ligand L derived from kaempferol and diethylenetriamine, has been synthesized and characterized by elemental analysis, IR, UV-visible, 1H NMR, thermogravimetric analysis, and molar conductance measurements. The fluorescence spectra, circular dichroism spectra, and viscosity measurements and gel electrophoresis experiments indicated that the ligand L and La (III) complex could bind to CT-DNA presumably via intercalative mode and the La (III) complex showed a stronger ability to bind and cleave DNA than the ligand L alone. The binding constants (Kb) were evaluated from fluorescence data and the values ranged from 0.454 to 0.659 × 105 L mol−1 and 1.71 to 17.3 × 105 L mol−1 for the ligand L and La (III) complex, respectively, in the temperature range of 298–310 K. It was also found that the fluorescence quenching mechanism of EB-DNA by ligand L and La (III) complex was a static quenching process. In comparison to free ligand L, La (III) complex exhibited enhanced cytotoxic activities against tested tumor cell lines HL-60 and HepG-2, which may correlate with the enhanced DNA binding and cleaving abilities of the La (III) complex. PMID:25371657

  10. Synthesis, crystal structure and luminescence properties of acenaphthene benzohydrazide based ligand and its zinc(II) complex

    NASA Astrophysics Data System (ADS)

    Kumar, Mukesh; Roy, Soumyabrata; Faizi, Md. Serajul Haque; Kumar, Santosh; Singh, Mantu Kumar; Kishor, Shyam; Peter, Sebastian C.; John, Rohith P.

    2017-01-01

    The complex compound of zinc(II) supported by (Z)-2-hydroxy-N‧-(1-oxoacenaphthylen-2(1H) ylidene)benzohydrazide ligand (H2L1) has been reported and discussed. The reaction of zinc acetate with H2L1 ligand leads to the formation of a mononuclear zinc(ii) complex, [Zn(HL1)2H2O]. The ligand, H2L1 has been characterized by elemental analysis, 1H, 13C and 1Hsbnd COSY -NMR, IR and ESI-MS, while the complex was characterized by elemental analysis, IR, and ESI-MS. The crystal structures of the free ligand H2L1 and the complex have also been determined by single crystal X-ray diffraction. The ligand chelates with metal centre with a nitrogen atom of imino moiety and an oxygen atom of enolic group. The complex shows distorted trigonal bipyramidal geometry around the metal centre with oxygen atoms lying in the equatorial plane and imino nitrogen atoms along the axial direction. The DFT/TD-DFT calculations were performed on both the ligand and its zinc complex to get insight into the structural, electronic and optical properties. The photoluminescence, fluorescence properties of the complex have been investigated.

  11. Synthesis, characterization and properties of copper(I) complexes with bis(diphenylphosphino)-ferrocene ancillary ligand

    NASA Astrophysics Data System (ADS)

    Liu, Xinfang; Zhang, Songlin; Ding, Yuqiang

    2012-06-01

    Three copper(I) complexes (2-4) containing dppf ancillary ligand (dppf = bis(diphenylphosphino)-ferrocene) were synthesized when chloride-bridged copper(I) complex 1 reacted with acetanilide and characterized by IR, element analysis and NMR spectrum. And the crystal structures of complexes 2 and 4 have been determined by X-ray diffraction method. Complex 2, an acetate-bridged copper(I) complex, was obtained under N2 atmosphere in un-dried solvent; the acetate ion came from the hydrolysis reaction of acetanilide due to residual water in solvent. Acetanilide was deprotonated and coordinated with the copper(I) centre to form a copper(I) amidate complex 3 when reacted in pre-dried solvent. In addition, a known complex 4, the oxidation product of dppf, was isolated from the same reaction system when reacted in air atmosphere. CV and TG experiments were carried out to check the electron transfer properties and thermal stabilities of complexes 2-3. Finally, the arylation reaction of complex 3 with iodobenzene was performed to study the reaction mechanism of copper(I) catalyzed Goldberg reaction.

  12. Two tridentate Schiff base ligands and their mononuclear cobalt (III) complexes: Synthesis, characterization, antibacterial and antifungal activities.

    PubMed

    Gungor, Elif; Celen, Selma; Azaz, Dilek; Kara, Hulya

    2012-08-01

    Two Schiff base ligands (HL1, HL2) and their Co(III) complexes, [Co(HL1)(L1)] (1) and [Co(HL2)(L2)] (2) [where HL1=2-((E)-(2-hydroxyethylimino)methyl)-4-chlorophenol and HL2=2-((E)-(2-hydroxyethylimino)methyl)-4-bromophenol] were synthesized and characterized using spectroscopic methods. The crystal structures of 1 and 2 have been re-determined by single crystal diffraction at 100K. The ligands and their Co(III) complexes were screened for antibacterial and antifungal activities by the disc diffusion, microdilution broth and single spore culture techniques. The antimicrobial activity of the Co(III) complexes and the free ligands exhibit antimicrobial properties and the Co(III) complexes show enhanced inhibitory activity compared with their parent ligand.

  13. Association of a Platinum Complex to a G-Quadruplex Ligand Enhances Telomere Disruption.

    PubMed

    Charif, Razan; Granotier-Beckers, Christine; Bertrand, Hélène Charlotte; Poupon, Joël; Ségal-Bendirdjian, Evelyne; Teulade-Fichou, Marie-Paule; Boussin, François D; Bombard, Sophie

    2017-08-21

    Telomeres protect the ends of chromosomes against illegitimate recombination and repair. They can be targets for G-quadruplex ligands and platinum complexes due to their repeated G-rich sequences. Protection of telomeres is ensured by a complex of six proteins, including TRF2, which inhibits the DNA damage response pathway. We analyzed telomere modifications induced in cancer cells by the experimental hybrid platinum complex, Pt-MPQ, comprising both an ethylene diamine monofunctional platinum complex and a G-quadruplex recognition moiety (MPQ). Pt-MPQ promotes the displacement of two telomeric proteins (TRF2 and TRF1) from telomeres, as well as the formation of telomere damage and telomere sister losses, whereas the control compound MPQ does not. This suggests that the platinum moiety potentiates the targeting of the G-quadruplex ligand to telomeres, opening a new perspective for telomere biology and anticancer therapy. Interestingly, the chemotherapy drug cisplatin, which has no specific affinity for G-quadruplex structures, partially induces the TRF2 delocalization from telomeres but produces less telomeric DNA damage, suggesting that this TRF2 displacement could be independent of G-quadruplex recognition.

  14. X-ray absorption spectral studies of copper (II) mixed ligand complexes

    NASA Astrophysics Data System (ADS)

    Soni, B.; Dar, Davood Ah; Shrivastava, B. D.; Prasad, J.; Srivastava, K.

    2014-09-01

    X-ray absorption spectra at the K-edge of copper have been studied in two copper mixed ligand complexes, one having tetramethyethylenediamine (tmen) and the other having tetraethyethylenediamine (teen) as one of the ligands. The spectra have been recorded at BL-8 dispersive extended X-ray absorption fine structure (EXAFS) beamline at the 2.5 GeV INDUS- 2 synchrotron, RRCAT, Indore, India. The data obtained has been processed using the data analysis program Athena. The energy of the K-absorption edge, chemical shift, edge-width and shift of the principal absorption maximum in the complexes have been determined and discussed. The values of these parameters have been found to be approximately the same in both the complexes indicating that the two complexes possess similar chemical environment around the copper metal atom. The chemical shift has been utilized to estimate effective nuclear charge on the absorbing atom. The normalized EXAFS spectra have been Fourier transformed. The position of the first peak in the Fourier transform gives the value of first shell bond length, which is shorter than the actual bond length because of energy dependence of the phase factors in the sine function of the EXAFS equation. This distance is thus the phase- uncorrected bond length. Bond length has also been determined by Levy's, Lytle's and Lytle, Sayers and Stern's (LSS) methods. The results obtained from LSS and the Fourier transformation methods are comparable with each other, since both are phase uncorrected bond lengths.

  15. Synthesis, structures and fluorescent properties of metal complexes based on polyphosphine ligands

    NASA Astrophysics Data System (ADS)

    Huang, Ting-Hong; Yang, Hu; Zhu, Sheng-Lan; Zhao, Bin; Yang, Yan

    2017-01-01

    Based on polyphosphine ligands, four complexes, [Cu2(pba)2(pipzdtc)]·2DMF (1), [Cu2(pbaa) (Et-dtc)2]·2DMF (2), [Cu2(pnaa) (Et-dtc)2] (3) and [Ag2(pnaa) (Et-dtc)2] ·2CH3CN (4) (pba = N,N-bis((diphenylphosphino)methyl)benzenamine, pbaa = N,N,N‧,N'-tetrakis((di-phenylphosphino)methyl)benzene-1,4-diamine, pnaa = N,N,N‧,N'-tetrakis((diphenylphosphino)- methyl)naphthalene-1,5-diamine, Et-dtc = N-ethyldithiocarbamate and pipzdtc = piperazine- 1,4-dicarbodithiolate), have been synthesized and characterized by IR, ESI-MS and X-ray crystal structure analysis. The structural analysis shows that each Cu+/Ag+ in complexes 1-4 is four coordinate P2S2, and adopts a distorted-tetrahedral geometry, and 1D infinite chain of complexes 2 and 4 is built by Csbnd H⋯π interaction of phenyl rings from pbaa and pnaa. All these indicate that the change of polyphosphine ligands and metal ions might be the key of construction of 1D infinite chain. Moreover, the emission spectra of complexes 2-4 in DMF solvent are also observed.

  16. Synthetic, crystallographic, and computational study of copper(II) complexes of ethylenediaminetetracarboxylate ligands.

    PubMed

    Matović, Zoran D; Miletić, Vesna D; Ćendić, Marina; Meetsma, Auke; van Koningsbruggen, Petra J; Deeth, Robert J

    2013-02-04

    Copper(II) complexes of hexadentate ethylenediaminetetracarboxylic acid type ligands H(4)eda3p and H(4)eddadp (H(4)eda3p = ethylenediamine-N-acetic-N,N',N'-tri-3-propionic acid; H(4)eddadp = ethylenediamine-N,N'-diacetic-N,N'-di-3-propionic acid) have been prepared. An octahedral trans(O(6)) geometry (two propionate ligands coordinated in axial positions) has been established crystallographically for the Ba[Cu(eda3p)]·8H(2)O compound, while Ba[Cu(eddadp)]·8H(2)O is proposed to adopt a trans(O(5)) geometry (two axial acetates) on the basis of density functional theory calculations and comparisons of IR and UV-vis spectral data. Experimental and computed structural data correlating similar copper(II) chelate complexes have been used to better understand the isomerism and departure from regular octahedral geometry within the series. The in-plane O-Cu-N chelate angles show the smallest deviation from the ideal octahedral value of 90°, and hence the lowest strain, for the eddadp complex with two equatorial β-propionate rings. A linear dependence between tetragonality and the number of five-membered rings has been established. A natural bonding orbital analysis of the series of complexes is also presented.

  17. Synthesis, structures and properties of three copper complexes with dibutyldithiocarbamate ligand

    NASA Astrophysics Data System (ADS)

    Wang, Chen; Niu, Jiao; Li, Jun; Ma, Xiaoxun

    2017-05-01

    Three copper complexes constructed with sulfur-containing dibutyldithiocarbamate ligand (DDTC), [(Et2NCS2)4Cu2] (1), [(Et2NCS2)(EtO)Cu]2 (2) and [(Et2NCS2)6Cu13I10]n (3) have been synthesized through the reaction of CuI with different mole ratios of DDTC under solution-diffusion conditions. The single crystal X-ray diffraction revealed that divalent Cu cations in complexes 1 and 2 imply that the reactant, Cu(I), was involved in the redox process. They formed binuclear complexes according to bridging S from DDTC ligands and O atoms from ethanol molecules respectively. The mixed valence Cu cations had two types of coordination environments in complex 3 and formed a two-dimensional layered coordination polymer by bridging the five-core Cu(I) clusters and Cu(II). The powder X-ray diffraction, luminescent, thermogravimetric analysis, etc. were also studied in this paper.

  18. Organometallic Iridium Complex Containing a Dianionic, Tridentate, Mixed Organic-Inorganic Ligand.

    PubMed

    Bloomfield, Aaron J; Matula, Adam J; Mercado, Brandon Q; Batista, Victor S; Crabtree, Robert H

    2016-08-15

    A pentamethylcyclopentadienyl-iridium complex containing a tricyclic, dianionic, tridentate, scorpionate (facial binding), mixed organic-inorganic ligand was synthesized and characterized by single-crystal X-ray crystallography, as well as polynuclear NMR, UV-vis, and IR spectroscopies. The central cycle of the tridentate ligand consists of a modified boroxine in which two of the boron centers are tetrahedral, anionic borates. The complex is stable to hydrolysis in aqueous solution for >9 weeks at 25 °C but reacts with a 50 mM solution of sodium periodate within 12 s to form a periodate-driven oxygen evolution catalyst that has a turnover frquency of >15 s(-1). However, the catalyst is almost completely deactivated within 5 min, achieving an average turnover number of ca. 2500 molecules of oxygen per atom of iridium. Nanoparticles were not observed on this time scale but did form within 4 h of catalyst activation under these experimental conditions. The parent complex was modeled using density functional theory, which accurately reflected the geometry of the complex and indicated significant interaction of iridium- and boracycle-centered orbitals.

  19. Insights into cyclin groove recognition: complex crystal structures and inhibitor design through ligand exchange.

    PubMed

    Kontopidis, George; Andrews, Martin J I; McInnes, Campbell; Cowan, Angela; Powers, Helen; Innes, Lorraine; Plater, Andy; Griffiths, Gary; Paterson, Dougie; Zheleva, Daniella I; Lane, David P; Green, Stephen; Walkinshaw, Malcolm D; Fischer, Peter M

    2003-12-01

    Inhibition of CDK2/CA (cyclin-dependent kinase 2/cyclin A complex) activity through blocking of the substrate recognition site in the cyclin A subunit has been demonstrated to be an effective method for inducing apoptosis in tumor cells. We have used the cyclin binding motif (CBM) present in the tumor suppressor proteins p21(WAF1) and p27(KIP1) as a template to optimize the minimal sequence necessary for CDK2/CA inhibition. A series of peptides were prepared, containing nonnatural amino acids, which possess nano- to micromolar CDK2-inhibitory activity. Here we present X-ray structures of the protein complex CDK2/CA, together with the cyclin groove-bound peptides H-Ala-Ala-Abu-Arg-Ser-Leu-Ile-(p-F-Phe)-NH(2) (peptide 1), H-Arg-Arg-Leu-Ile-Phe-NH(2) (peptide 2), Ac-Arg-Arg-Leu-Asn-(m-Cl-Phe)-NH(2) (peptide 3), H-Arg-Arg-Leu-Asn-(p-F-Phe)-NH(2) (peptide 4), and H-Cit-Cit-Leu-Ile-(p-F-Phe)-NH(2) (peptide 5). Some of the peptide complexes presented here were obtained through the novel technique of ligand exchange within protein crystals. This method may find general application for obtaining complex structures of proteins with surface-bound ligands.

  20. Rational Design of Orthogonal Multipolar Interactions with Fluorine in Protein–Ligand Complexes

    DOE PAGES

    Pollock, Jonathan; Borkin, Dmitry; Lund, George; ...

    2015-08-19

    Multipolar interactions involving fluorine and the protein backbone have been frequently observed in protein–ligand complexes. Such fluorine–backbone interactions may substantially contribute to the high affinity of small molecule inhibitors. Here we found that introduction of trifluoromethyl groups into two different sites in the thienopyrimidine class of menin–MLL inhibitors considerably improved their inhibitory activity. In both cases, trifluoromethyl groups are engaged in short interactions with the backbone of menin. In order to understand the effect of fluorine, we synthesized a series of analogues by systematically changing the number of fluorine atoms, and we determined high-resolution crystal structures of the complexes withmore » menin. Here, we found that introduction of fluorine at favorable geometry for interactions with backbone carbonyls may improve the activity of menin–MLL inhibitors as much as 5- to 10-fold. In order to facilitate the design of multipolar fluorine–backbone interactions in protein–ligand complexes, we developed a computational algorithm named FMAP, which calculates fluorophilic sites in proximity to the protein backbone. We demonstrated that FMAP could be used to rationalize improvement in the activity of known protein inhibitors upon introduction of fluorine. Furthermore, FMAP may also represent a valuable tool for designing new fluorine substitutions and support ligand optimization in drug discovery projects. Analysis of the menin–MLL inhibitor complexes revealed that the backbone in secondary structures is particularly accessible to the interactions with fluorine. Lastly, considering that secondary structure elements are frequently exposed at protein interfaces, we postulate that multipolar fluorine–backbone interactions may represent a particularly attractive approach to improve inhibitors of protein–protein interactions.« less

  1. Rational Design of Orthogonal Multipolar Interactions with Fluorine in Protein-Ligand Complexes.

    PubMed

    Pollock, Jonathan; Borkin, Dmitry; Lund, George; Purohit, Trupta; Dyguda-Kazimierowicz, Edyta; Grembecka, Jolanta; Cierpicki, Tomasz

    2015-09-24

    Multipolar interactions involving fluorine and the protein backbone have been frequently observed in protein-ligand complexes. Such fluorine-backbone interactions may substantially contribute to the high affinity of small molecule inhibitors. Here we found that introduction of trifluoromethyl groups into two different sites in the thienopyrimidine class of menin-MLL inhibitors considerably improved their inhibitory activity. In both cases, trifluoromethyl groups are engaged in short interactions with the backbone of menin. In order to understand the effect of fluorine, we synthesized a series of analogues by systematically changing the number of fluorine atoms, and we determined high-resolution crystal structures of the complexes with menin. We found that introduction of fluorine at favorable geometry for interactions with backbone carbonyls may improve the activity of menin-MLL inhibitors as much as 5- to 10-fold. In order to facilitate the design of multipolar fluorine-backbone interactions in protein-ligand complexes, we developed a computational algorithm named FMAP, which calculates fluorophilic sites in proximity to the protein backbone. We demonstrated that FMAP could be used to rationalize improvement in the activity of known protein inhibitors upon introduction of fluorine. Furthermore, FMAP may also represent a valuable tool for designing new fluorine substitutions and support ligand optimization in drug discovery projects. Analysis of the menin-MLL inhibitor complexes revealed that the backbone in secondary structures is particularly accessible to the interactions with fluorine. Considering that secondary structure elements are frequently exposed at protein interfaces, we postulate that multipolar fluorine-backbone interactions may represent a particularly attractive approach to improve inhibitors of protein-protein interactions.

  2. Rational Design of Orthogonal Multipolar Interactions with Fluorine in Protein–Ligand Complexes

    PubMed Central

    2015-01-01

    Multipolar interactions involving fluorine and the protein backbone have been frequently observed in protein–ligand complexes. Such fluorine–backbone interactions may substantially contribute to the high affinity of small molecule inhibitors. Here we found that introduction of trifluoromethyl groups into two different sites in the thienopyrimidine class of menin–MLL inhibitors considerably improved their inhibitory activity. In both cases, trifluoromethyl groups are engaged in short interactions with the backbone of menin. In order to understand the effect of fluorine, we synthesized a series of analogues by systematically changing the number of fluorine atoms, and we determined high-resolution crystal structures of the complexes with menin. We found that introduction of fluorine at favorable geometry for interactions with backbone carbonyls may improve the activity of menin–MLL inhibitors as much as 5- to 10-fold. In order to facilitate the design of multipolar fluorine–backbone interactions in protein–ligand complexes, we developed a computational algorithm named FMAP, which calculates fluorophilic sites in proximity to the protein backbone. We demonstrated that FMAP could be used to rationalize improvement in the activity of known protein inhibitors upon introduction of fluorine. Furthermore, FMAP may also represent a valuable tool for designing new fluorine substitutions and support ligand optimization in drug discovery projects. Analysis of the menin–MLL inhibitor complexes revealed that the backbone in secondary structures is particularly accessible to the interactions with fluorine. Considering that secondary structure elements are frequently exposed at protein interfaces, we postulate that multipolar fluorine–backbone interactions may represent a particularly attractive approach to improve inhibitors of protein–protein interactions. PMID:26288158

  3. Rational Design of Orthogonal Multipolar Interactions with Fluorine in Protein–Ligand Complexes

    SciTech Connect

    Pollock, Jonathan; Borkin, Dmitry; Lund, George; Purohit, Trupta; Dyguda-Kazimierowicz, Edyta; Grembecka, Jolanta; Cierpicki, Tomasz

    2015-08-19

    Multipolar interactions involving fluorine and the protein backbone have been frequently observed in protein–ligand complexes. Such fluorine–backbone interactions may substantially contribute to the high affinity of small molecule inhibitors. Here we found that introduction of trifluoromethyl groups into two different sites in the thienopyrimidine class of menin–MLL inhibitors considerably improved their inhibitory activity. In both cases, trifluoromethyl groups are engaged in short interactions with the backbone of menin. In order to understand the effect of fluorine, we synthesized a series of analogues by systematically changing the number of fluorine atoms, and we determined high-resolution crystal structures of the complexes with menin. Here, we found that introduction of fluorine at favorable geometry for interactions with backbone carbonyls may improve the activity of menin–MLL inhibitors as much as 5- to 10-fold. In order to facilitate the design of multipolar fluorine–backbone interactions in protein–ligand complexes, we developed a computational algorithm named FMAP, which calculates fluorophilic sites in proximity to the protein backbone. We demonstrated that FMAP could be used to rationalize improvement in the activity of known protein inhibitors upon introduction of fluorine. Furthermore, FMAP may also represent a valuable tool for designing new fluorine substitutions and support ligand optimization in drug discovery projects. Analysis of the menin–MLL inhibitor complexes revealed that the backbone in secondary structures is particularly accessible to the interactions with fluorine. Lastly, considering that secondary structure elements are frequently exposed at protein interfaces, we postulate that multipolar fluorine–backbone interactions may represent a particularly attractive approach to improve inhibitors of protein–protein interactions.

  4. Novel dinuclear platinum(II) complexes containing mixed nitrogen-sulfur donor ligands.

    PubMed

    Hochreuther, Stephanie; Puchta, Ralph; van Eldik, Rudi

    2011-12-19

    A series of novel dinuclear platinum(II) complexes were synthesized containing a mixed nitrogen-sulfur donor bidentate chelate system in which the two platinum centers are connected by an aliphatic chain of variable length. The bidentate chelating ligands were selected to stabilize the complex toward decomposition. The pK(a) values and reactivity of the four synthesized complexes, namely, [Pt(2)(S(1),S(4)-bis(2-pyridylmethyl)-1,4-butanedithioether)(OH(2))(4)](4+) (4NSpy), [Pt(2)(S(1),S(6)-bis(2-pyridylmethyl)-1,6-hexanedithioether)(OH(2))(4)](4+) (6NSpy), [Pt(2)(S(1),S(8)-bis(2-pyridylmethyl)-1,8-octanedithioether)(OH(2))(4)](4+) (8NSpy), and [Pt(2)(S(1),S(10)-bis(2-pyridylmethyl)-1,10-decanedithioether)(OH(2))(4)](4+) (10NSpy), were investigated. This system is of special interest because only little is known about the substitution behavior of dinuclear platinum complexes that contain a bidentate chelate that forms part of the aliphatic bridging ligand. Moreover, the ligands as well as the dinuclear complexes were examined in terms of their cytotoxic activity, and the 10NSpy complex was found to be active. Spectrophotometric acid-base titrations were performed to determine the pK(a) values of all the coordinated water molecules. The substitution of coordinated water by thiourea was studied under pseudo-first-order conditions as a function of nucleophile concentration, temperature, and pressure, using stopped-flow techniques and UV-vis spectroscopy. The results for the dinuclear complexes were compared to those for the corresponding mononuclear reference complex [Pt(methylthiomethylpyridine)(OH(2))(2)](2+) (Pt(mtp)), by which the effect of the increasing aliphatic chain length of the bridged complexes could be investigated. The results indicate that there is a clear interaction between the two platinum centers, which becomes weaker as the chain length between the metal centers increases. Furthermore, differences and similarities of the N,S-system were compared to

  5. Magnetism and electronic structure of triplet binuclear niobium complexes in inorganic glasses, organic ligand environment, and polymers

    NASA Astrophysics Data System (ADS)

    Rakhimov, R. R.; Arrington, S. A.; Jackson, E. M.; Hwang, J. S.; Prokof'ev, A. I.; Alexandrov, I. A.; Aleksandrov, A. I.

    2005-05-01

    We investigated paramagnetic properties of binuclear niobium complexes Nb-O-Nb with two nonequivalent Nb4+ ions in lithium-niobium phosphate glasses (LNPG), in the environment of catechol/ortho-quinone ligands and in polyethylene. Experimental electron paramagnetic resonance spectrum analysis revealed nonequivalent distribution of the charge and electron spin density between two Nb atoms. Mechanochemical interaction of LNPG with an organic donor-acceptor mixture catechol/ortho-quinone followed by organic solvent extraction leads to the formation of a new binuclear complex with catechol/ortho-quinone ligands. This complex can be further incorporated into polyethylene matrix to form the complex with properties close to the complex in LNPG.

  6. Sugar-Annulated Oxazoline Ligands: A Novel Pd(II) Complex and Its Application in Allylic Substitution.

    PubMed

    Kraft, Jochen; Mill, Katharina; Ziegler, Thomas

    2016-12-10

    Two novel carbohydrate-derived pyridyl (PYOX)- and cyclopropyl (CYBOX)-substituted oxazoline ligands were prepared from d-glucosamine hydrochloride and 1,3,4,6-tetra-O-acetyl-2-amino-2-deoxy-β-d-glucopyranose hydrochloride in two steps, respectively. The sugar-annulated PYOX ligand formed a stable metal complex with Pd(II), which was fully characterized by NMR spectroscopy and X-ray crystallography. NMR and X-ray analysis revealed a change of the conformation in the sugar moiety upon complexation with the palladium(II) species. Both glycosylated ligands resulted in high asymmetric induction (up to 98% ee) upon application as chiral ligands in the Pd-catalyzed allylic alkylation of rac-1,3-diphenylallyl acetate with dimethyl malonate (Tsuji-Trost reaction). Both ligands provided mainly the (R)-enantiomer of the alkylation product.

  7. Determining the magnitude and direction of photoinduced ligand field switching in photochromic metal-organic complexes: molybdenum-tetracarbonyl spirooxazine complexes.

    PubMed

    Paquette, Michelle M; Patrick, Brian O; Frank, Natia L

    2011-07-06

    The ability to optically switch or tune the intrinsic properties of transition metals (e.g., redox potentials, emission/absorption energies, and spin states) with photochromic metal-ligand complexes is an important strategy for developing "smart" materials. We have described a methodology for using metal-carbonyl complexes as spectroscopic probes of ligand field changes associated with light-induced isomerization of photochromic ligands. Changes in ligand field between the ring-closed spirooxazine (SO) and ring-opened photomerocyanine (PMC) forms of photochromic azahomoadamantyl and indolyl phenanthroline-spirooxazine ligands are demonstrated through FT-IR, (13)C NMR, and computational studies of their molybdenum-tetracarbonyl complexes. The frontier molecular orbitals (MOs) of the SO and PMC forms differ considerably in both electron density distributions and energies. Of the multiple π* MOs in the SO and PMC forms of the ligands, the LUMO+1, a pseudo-b(1)-symmetry phenanthroline-based MO, mixes primarily with the Mo(CO)(4) fragment and provides the major pathway for Mo(d)→phen(π*) backbonding. The LUMO+1 is found to be 0.2-0.3 eV lower in energy in the SO form relative to the PMC form, suggesting that the SO form is a better π-acceptor. Light-induced isomerization of the photochromic ligands was therefore found to lead to changes in the energies of their frontier MOs, which in turn leads to changes in π-acceptor ability and ligand field strength. Ligand field changes associated with photoisomerizable ligands allow tuning of excited-state and ground-state energies that dictate energy/electron transfer, optical/electrical properties, and spin states of a metal center upon photoisomerization, positioning photochromic ligand-metal complexes as promising targets for smart materials.

  8. Copper (II) complexes possessing alkyl-substituted polypyridyl ligands: Structural characterization and in vitro antitumor activity.

    PubMed

    Angel, Noah R; Khatib, Raneen M; Jenkins, Julia; Smith, Michelle; Rubalcava, Justin M; Le, Brian Khoa; Lussier, Daniel; Chen, Zhuo Georgia; Tham, Fook S; Wilson, Emma H; Eichler, Jack F

    2017-01-01

    In an effort to find alternatives to the antitumor drug cisplatin, a series of copper (II) complexes possessing alkyl-substituted polypyridyl ligands have been synthesized. Eight new complexes are reported herein: μ-dichloro-bis{2,9-di-sec-butyl-1,10-phenanthrolinechlorocopper(II)} {[((di-sec-butyl)phen)ClCu(μ-Cl)2CuCl((di-sec-butyl)phen)]}(1), 2-sec-butyl-1,10-phenanthrolinedichlorocopper(II) {([mono-sec-butyl)phen) CuCl2} (2), 2,9-di-n-butyl-1,10-phenanthrolinedichlorocopper(II) {[(di-n-butyl)phen) CuCl2}(3), 2-n-butyl-1,10-phenanthrolinedichlorocopper(II) {[(mono-n-butyl)phen) CuCl2} (4), 2,9-di-methyl-1,10-phenanthrolineaquadichlorocopper(II) {[(di-methyl)phen) Cu(H2O)Cl2}(5), μ-dichloro-bis{6-sec-butyl-2,2'-bipyridinedichlorocopper(II)} {((mono-sec-butyl)bipy) ClCu(μ-Cl)2CuCl((mono-sec-butyl)bipy)} (6), 6,6'-di-methyl-2,2'-bipyridinedichlorocopper(II) {(6,6'-di-methyl)bipy) CuCl2} (7), and 4,4'-dimethyl-2,2'-bipyridinedichlorocopper(II) {(4,4'-di-methyl)bipy) CuCl2} (8). These complexes have been characterized via elemental analysis, UV-vis spectroscopy, and mass spectrometry. Single crystal X-ray diffraction experiments revealed the complexes synthesized with the (di-sec-butyl)phen ligand (1) and (mono-sec-butyl)bipy ligand (6) crystallized as dimers in which two copper(II) centers are bridged by two chloride ligands. Conversely, complexes 2, 7, and 8 were isolated as monomeric species possessing distorted tetrahedral geometries, and the [((di-methyl)phen)Cu(H2O)Cl2] (5) complex was isolated as a distorted square pyramidal monomer possessing a coordinating aqua ligand. Compounds 1-8 were evaluated for their in vitro antitumor efficacy. Compounds 1, 5, and 7 in particular were found to exhibit remarkable activity against human derived lung cancer cells, yet this class of copper(II) compounds had minimal cytotoxic effect on non-cancerous cells. In vitro control experiments indicate the activity of the copper(II) complexes most likely does not arise from the

  9. Synthesis and conformational study of a novel macrocyclic chiral(salen) ligand and its uranyl and Mn complexes.

    PubMed

    Amato, Maria E; Ballistreri, Francesco P; Pappalardo, Andrea; Tomaselli, Gaetano A; Toscano, Rosa M

    2010-03-09

    A novel chiral macrocyclic ligand incorporating a chiral salen moiety into a framework containing two biphenyl units was synthesized. Structural properties and conformational aspects of the free ligand and an UO2 complex were studied by using NMR spectroscopy in solution and MM calculations. The Mn(III) complex was tested as catalyst in enantioselective oxidation of prochiral unfunctionalized olefins to the corresponding optically active epoxides under very mild conditions.

  10. Controlling the binding of dihydrogen using ruthenium complexes containing N-mono-functionalised 1,4,7-triazacyclononane ligand systems.

    PubMed

    Gott, Andrew L; McGowan, Patrick C; Podesta, Thomas J

    2008-07-28

    Pendant arm macrocycles derived from 1,4,7-triazacyclononane were reacted with RuHCl(CO)(PPh(3))(3) and RuHCl(PPh(3))(3) to yield air-stable cationic ruthenium hydrides that were characterised by a variety of techniques, including X-ray crystallography. Protonation of the metal hydride complexes with a proton source yielded eta(2)-dihydrogen complexes. The lifetime of the dihydrogen ligand was effected by a judicious choice of ancillary ligands.

  11. Synthesis and electronic structure determination of uranium(vi) ligand radical complexes.

    PubMed

    Herasymchuk, Khrystyna; Chiang, Linus; Hayes, Cassandra E; Brown, Matthew L; Ovens, Jeffrey S; Patrick, Brian O; Leznoff, Daniel B; Storr, Tim

    2016-08-02

    Pentagonal bipyramidal uranyl (UO2(2+)) complexes of salen ligands, N,N'-bis(3-tert-butyl-(5R)-salicylidene)-1,2-phenylenediamine, in which R = (t)Bu (1a), OMe (1b), and NMe2 (1c), were prepared and the electronic structure of the one-electron oxidized species [1a-c]+ were investigated in solution. The solid-state structures of 1a and 1b were solved by X-ray crystallography, and in the case of 1b an asymmetric UO2(2+) unit was found due to an intermolecular hydrogen bonding interaction. Electrochemical investigation of 1a-c by cyclic voltammetry showed that each complex exhibited at least one quasi-reversible redox process assigned to the oxidation of the phenolate moieties to phenoxyl radicals. The trend in redox potentials matches the electron-donating ability of the para-phenolate substituents. The electron paramagnetic resonance spectra of cations [1a-c]+ exhibited gav values of 1.997, 1.999, and 1.995, respectively, reflecting the ligand radical character of the oxidized forms, and in addition, spin-orbit coupling to the uranium centre. Chemical oxidation as monitored by ultraviolet-visible-near-infrared (UV-vis-NIR) spectroscopy afforded the one-electron oxidized species. Weak low energy intra-ligand charge transfer (CT) transitions were observed for [1a-c]+ indicating localization of the ligand radical to form a phenolate/phenoxyl radical species. Further analysis using density functional theory (DFT) calculations predicted a localized phenoxyl radical for [1a-c]+ with a small but significant contribution of the phenylenediamine unit to the spin density. Time-dependent DFT (TD-DFT) calculations provided further insight into the nature of the low energy transitions, predicting both phenolate to phenoxyl intervalence charge transfer (IVCT) and phenylenediamine to phenoxyl CT character. Overall, [1a-c]+ are determined to be relatively localized ligand radical complexes, in which localization is enhanced as the electron donating ability of the para

  12. Impaired ergosterol biosynthesis mediated fungicidal activity of Co(II) complex with ligand derived from cinnamaldehyde.

    PubMed

    Shreaz, Sheikh; Shiekh, Rayees A; Raja, Vaseem; Wani, Waseem A; Behbehani, Jawad M

    2016-03-05

    In this study, we have used aldehyde function of cinnamaldehyde to synthesize N, N'-Bis (cinnamaldehyde) ethylenediimine [C20H20N2] and Co(II) complex of the type [Co(C40H40N4)Cl2]. The structures of the synthesized compounds were determined on the basis of physiochemical analysis and spectroscopic data ((1)H NMR, FTIR, UV-visible and mass spectra) along with molar conductivity measurements. Anticandidal activity of cinnamaldehyde its ligand [L] and Co(II) complex was investigated by determining MIC80, time-kill kinetics, disc diffusion assay and ergosterol extraction and estimation assay. Ligand [L] and Co(II) complex are found to be 4.55 and 21.0 folds more efficient than cinnamaldehyde in a liquid medium. MIC80 of Co(II) complex correlated well with ergosterol inhibition suggesting ergosterol biosynthesis to be the primary site of action. In comparison to fluconazole, the test compounds showed limited toxicity against H9c2 rat cardiac myoblasts. In confocal microscopy propidium iodide (PI) penetrates the yeast cells when treated with MIC of metal complex, indicating a disruption of cell membrane that results in imbibition of dye. TEM analysis of metal complex treated cells exhibited notable alterations or damage to the cell membrane and the cell wall. The structural disorganization within the cell cytoplasm was noted. It was concluded that fungicidal activity of Co(II) complex originated from loss of membrane integrity and a decrease in ergosterol content is only one consequence of this.

  13. Luminescent rhenium(I) tricarbonyl complexes with pyrazolylamidino ligands: photophysical, electrochemical, and computational studies.

    PubMed

    Gómez-Iglesias, Patricia; Guyon, Fabrice; Khatyr, Abderrahim; Ulrich, Gilles; Knorr, Michael; Martín-Alvarez, Jose Miguel; Miguel, Daniel; Villafañe, Fernando

    2015-10-28

    New pyrazolylamidino complexes fac-[ReCl(CO)3(NH[double bond, length as m-dash]C(Me)pz*-κ(2)N,N)] (pz*H = pyrazole, pzH; 3,5-dimethylpyrazole, dmpzH; indazole, indzH) and fac-[ReBr(CO)3(NH[double bond, length as m-dash]C(Ph)pz*-κ(2)N,N)] are synthesized via base-catalyzed coupling of the appropriate nitrile with pyrazole, or via metathesis by halide abstraction with AgBF4 from a bromido pyrazolylamidino complex and the subsequent addition of LiCl. In order to study both the influence of the substituents present at the pyrazolylamidino ligand, and that of the "sixth" ligand in the complex, photophysical, electrochemical, and computational studies have been carried out on this series and other complexes previously described by us, of the general formula fac-[ReL(CO)3(NH[double bond, length as m-dash]C(R')pz*-κ(2)N,N)](n+) (L = Cl, Br; R' = Me, Ph, n = 0; or L = NCMe, dmpzH, indzH, R' = Me, n = 1). All complexes exhibit phosphorescent decays from a prevalently (3)MLCT excited state with quantum yields (Φ) in the range between 0.007 and 0.039, and long lifetimes (τ∼ 8-1900 ns). The electrochemical study reveals irreversible reduction for all complexes. The oxidation of the neutral complexes was found to be irreversible due to halido-dissociation, whereas the cationic species display a reversible process implying the ReI/ReII couple. Density functional and time-dependent density functional theory (TD-DFT) calculations provide a reasonable trend for the values of emission energies in line with the experimental photophysical data, supporting the (3)MLCT based character of the emissions.

  14. Thermally unstable complexants: Stability of lanthanide/actinide complexes, thermal instability of the ligands, and applications in actinide separations

    SciTech Connect

    Nash, K.L.; Rickert, P.G.

    1993-01-01

    Water soluble complexing agents are commonly used in separations to enhance the selectivity of both ion exchange and solvent extraction processes. Applications of this type in the treatment of nuclear wastes using conventional complexing agents have found mixed success due to the nature of the complexants. In addition, the residual solutions containing these species have led to potentially serious complications in waste storage. To overcome some of the limitations of carboxylic acid and aminopolycarboxylate ligands, the authors have initiated a program to investigate the complexing ability, thermal/oxidative instability, and separation potential of a group of water soluble organophosphorus compounds which they call Thermally Unstable Complexants, or simply TUCS. Complexants of this type appear to be superior to conventional analogues in a number of respects. In this report, they summarize their research to date on the actinide/lanthanide complexes with a series of substituted methanediphosphonic acids, the kinetics of their oxidative decomposition, and a few applications which have been developed for their use.

  15. Thermally unstable complexants: Stability of lanthanide/actinide complexes, thermal instability of the ligands, and applications in actinide separations

    SciTech Connect

    Nash, K.L.; Rickert, P.G.

    1991-01-01

    Water soluble complexing agents are commonly used in separations to enhance the selectivity of both ion exchange and solvent extraction processes. Applications of this type in the treatment of nuclear wastes using conventional complexing agents have found mixed success due to the nature of the complexants. In addition, the residual solutions containing these species have led to potentially serious complications in waste storage. To overcome some of the limitations of carboxylic acid and aminopolycarboxylate ligands, we have initiated a program to investigate the complexing ability, thermal/oxidative instability, and separation potential of a group of water soluble organophosphorus compounds which we call Thermally Unstable Complexants, or simply TUCS. Complexants of this type appear to be superior to conventional analogues in a number of respects. In this report, we will summarize our research to date on the actinide/lanthanide complexes with a series of substituted methanediphosphonic acids, the kinetics of their oxidative decomposition, and a few applications which have been developed for their use. 17 refs., 5 figs., 3 tab.

  16. Syntheses, crystal structures, and properties of four complexes based on polycarboxylate and imidazole ligands

    SciTech Connect

    Qiao, Rui; Chen, Shui-Sheng; Sheng, Liang-Quan; Yang, Song; Li, Wei-Dong

    2015-08-15

    Four metal–organic coordination polymers [Zn(HL)(H{sub 2}O)]·4H{sub 2}O (1), [Zn(HL)(L{sub 1})]·4H{sub 2}O (2), [Cu(HL)(H{sub 2}O)]·3H{sub 2}O (3) and [Cu(HL)(L{sub 1})]·5H{sub 2}O (4) were synthesized by reactions of the corresponding metal(II) salts with semirigid polycarboxylate ligand (5-((4-carboxypiperidin-1-yl)methyl)isophthalic acid hydrochloride, H{sub 3}L·HCl) or auxiliary ligand (1,4-di(1H-imidazol-4-yl)benzene, L{sub 1}). The structures of the compounds were characterized by elemental analysis, FT-IR spectroscopy and single-crystal X-ray diffraction. The use of auxiliary ligand L{sub 1} has great influence on the structures of two pairs of complexes 1, 2 and 3, 4. Complex 1 is a uninodal 3-connected rare 2-fold interpenetrating ZnSc net with a Point (Schlafli) symbol of (10{sup 3}) while 2 is a one-dimensional (1D) ladder structure. Compound 3 features a two-dimensional (2D) honeycomb network with typical 6{sup 3}-hcb topology, while 4 is 2D network with (4, 4) sql topology based on binuclear Cu{sup II} subunits. The non-covalent bonding interactions such as hydrogen bonds, π···π stacking and C–H···π exist in complexes 1–4, which contributes to stabilize crystal structure and extend the low-dimensional entities into high-dimensional frameworks. And the photoluminescent property of 1 and 2 and gas sorption property of 4 have been investigated. - Graphical abstract: Four new coordination polymers have been obtained and their photoluminescent and gas sorption properties have also been investigated. - Highlights: • Two pairs of Zn{sup II}/ Cu{sup II} compounds have been synthesized. • Auxiliary ligand-controlled assembly of the complexes is reported. • The luminescent properties of complexes 1–2 were investigated. • The gas sorption property of 4 has been investigated.

  17. From a Diphosphanegermylene to Nickel, Palladium, and Platinum Complexes Containing Germyl PGeP Pincer Ligands.

    PubMed

    Álvarez-Rodríguez, Lucía; Brugos, Javier; Cabeza, Javier A; García-Álvarez, Pablo; Pérez-Carreño, Enrique

    2017-08-19

    The PGeP pincer-type germylene Ge(NCH2 PtBu2 )2 C6 H4 (1) has been used to prepare a family of group 10 metal complexes, namely, [MCl{κ(3) P,Ge,P-GeCl(NCH2 PtBu2 )2 C6 H4 }] (M=Ni (2Ni ), Pd (2Pd ), Pt (2Pt )), featuring a chloridogermyl PGeP pincer ligand and a Cl-Ge-M-Cl bond sequence. Their reactivity is not initially centered on the metal atom but on their Ge atom. Complexes 2Ni and 2Pd easily led to the hydrolyzed products [Ni2 Cl2 {μ-(κ(3) P,Ge,P-Ge(NCH2 PtBu2 )2 C6 H4 )2 O}], which features a Cl-Ni-Ge-O-Ge-Ni-Cl bond sequence, and [PdCl{κ(3) P,Ge,P-Ge(OH)(NCH2 PtBu2 )2 C6 H4 }], which contains a hydroxidogermyl PGeP pincer ligand (2Pt is reluctant to undergo hydrolysis). Simple chloride exchange reactions led to the methoxidogermyl, methylgermyl, and phenylgermyl derivatives [MCl{κ(3) P,Ge,P-GeR(NCH2 PtBu2 )2 C6 H4 }] (M=Pd, Pt; R=OMe, Me, Ph). Whereas the palladium complexes [PdCl{κ(3) P,Ge,P-GeR(NCH2 PtBu2 )2 C6 H4 }] (R=Me, Ph) reacted with more MeLi or PhLi to give palladium black and GeR2 (NCH2 PtBu2 )2 C6 H4 (R=Me, Ph), similar reactions with the analogous platinum complexes afforded the transmetalation derivatives [PtR{κ(3) P,Ge,P-GeR(NCH2 PtBu2 )2 C6 H4 }] (R=Me, Ph). The short length of the CH2 PtBu2 arms of the PGeP pincer ligands forces the metal atoms of all these complexes to be in a very distorted square-planar ligand environment. The reactivity results have been rationalized with theoretical calculations. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  18. Thermal, spectroscopic, and solvent influence studies on mixed-ligand copper(II) complexes containing the bulky ligand: Bis[N-(p-tolyl)imino]acenaphthene.

    PubMed

    El-Ayaan, Usama; Gabr, I M

    2007-05-01

    Four mixed-ligand copper(II) complexes containing the rigid bidentate nitrogen ligand bis[N-(p-tolyl)imino]acenaphthene (abb. p-Tol-BIAN) ligand are reported. These complexes, namely [Cu(p-Tol-BIAN)(2)](ClO(4))(2)1, [Cu(p-Tol-BIAN)(acac)](ClO(4)) 2, [Cu(p-Tol-BIAN)Cl(2)] 3 and [Cu(p-Tol-BIAN)(AcOH)(2)](ClO(4))(2)4 (where acac, acetylacetonate and AcOH, acetic acid) have been prepared and characterized by elemental analysis, spectroscopic, magnetic and molar conductance measurements. ESR spectra suggest a square planar geometry for complexes 1 and 2. In complexes 3 and 4, a distorted tetrahedral arrangement around copper(II) centre was suggested. Solvatochromic behavior of all studied complexes indicates strong solvatochromism of their solutions. The observed solvatochromism is mainly due to the solute-solvent interaction between the chelate cation and the solvent molecules. Thermal properties and decomposition kinetics of all complexes are investigated. The kinetic parameters (E, A, Delta H, Delta S and Delta G) of all thermal decomposition stages have been calculated using the Coats-Redfern and other standard equations.

  19. Rare-Earth complexes of ferrocene-containing ligands: visible-light excitable luminescent materials.

    PubMed

    Yuan, Yao-Feng; Cardinaels, Thomas; Lunstroot, Kyra; Hecke, Kristof Van; Meervelt, Luc Van; Görller-Walrand, Christiane; Binnemans, Koen; Nockemann, Peter

    2007-06-25

    The ferrocene-derivatives bis(ferrocenyl-ethynyl)-1,10-phenanthroline (Fc(2)phen) and ferrocenoyltrifluoroacetone (Hfta) have been used to synthesize ferrocene-containing rare-earth beta-diketonate complexes. The complexes [Ln(tta)(3)(Fc(2)phen)] and [Ln(fta)(3)(phen)] (where Ln = La, Nd, Eu, Yb) show structural similarities to the tris(2-thenoyltrifluoroacetonate)(1,10-phenanthroline)lanthanide(III) complexes, [Ln(tta)(3)(phen)]. The coordination number of the lanthanide ion is 8, and the coordination sphere can be described as a distorted dodecahedron. However, the presence of the ferrocene moieties shifts the ligand absorption bands of the rare-earth complexes to longer wavelengths so that the complexes can be excited not only by ultraviolet radiation but also by visible light of wavelengths up to 420 nm. Red photoluminescence is observed for the europium(III) complexes and near-infrared photoluminescence for the neodymium(III) and ytterbium(III) complexes. The presence of the ferrocene groups makes the rare-earth complexes hydrophobic and well-soluble in apolar organic solvents.

  20. Copper Complexes of Anionic Nitrogen Ligands in the Amidation and Imidation of Aryl Halides

    PubMed Central

    Tye, Jesse W.; Weng, Zhiqiang; Johns, Adam M.; Incarvito, Christopher D.; Hartwig, John F.

    2010-01-01

    Copper(I) imidate and amidate complexes of chelating N,N-donor ligands, which are proposed intermediates in copper-catalyzed amidations of aryl halides, have been synthesized and characterized by X-ray diffraction and detailed solution-phase methods. In some cases, the complexes adopt neutral, three-coordinate trigonal planar structures in the solid state, but in other cases they adopt an ionic form consisting of an L2Cu+ cation and a CuX2− anion. A tetraalkylammonium salt of the CuX2− anion in which X = phthalimidate was also isolated. Conductivity measurements and 1H NMR spectra of mixtures of two complexes all indicate that the complexes exist predominantly in the ionic form in DMSO and DMF solutions. One complex was sufficiently soluble for conductance measurements in less polar solvents and was shown to adopt some degree of the ionic form in THF and predominantly the neutral form in benzene. The complexes containing dative nitrogen ligands reacted with iodoarenes and bromoarenes to form products from C–N coupling, but the ammonium salt of [Cu(phth)2]− did not. Similar selectivities for stoichiometric and catalytic reactions with two different iodoarenes and faster rates for the stoichiometric reactions implied that the isolated amidate and imidate complexes are intermediates in the reactions of amides and imides with haloarenes catalyzed by copper complexes containing dative N,N ligands. These amidates and imidates reacted much more slowly with chloroarenes, including chloroarenes that possess more favorable reduction potentials than some bromoarenes and that are known to undergo fast dissociation of chloride from the chloroarene radical anion. The reaction of o-(allyloxy)iodobenzene with [(phen)2Cu][Cu(pyrr)2] results in formation of the C-N coupled product in high yield and no detectable amount of the 3-methyl-2,3-dihydrobenzofuran or 3-methylene-2,3-dihydrobenzofuran products that would be expected from a reaction that generated free radicals. These

  1. Synthesis, structural elucidation, biological, antioxidant and nuclease activities of some 5-Fluorouracil-amino acid mixed ligand complexes

    NASA Astrophysics Data System (ADS)

    Shobana, Sutha; Subramaniam, Perumal; Mitu, Liviu; Dharmaraja, Jeyaprakash; Arvind Narayan, Sundaram

    2015-01-01

    Some biologically active mixed ligand complexes (1-9) have been synthesized from 5-Fluorouracil (5-FU; A) and amino acids (B) such as glycine (gly), L-alanine (ala) and L-valine (val) with Ni(II), Cu(II) and Zn(II) ions. The synthesized mixed ligand complexes (1-9) were characterized by various physico-chemical, spectral, thermal and morphological studies. 5-Fluorouracil and its mixed ligand complexes have been tested for their in vitro biological activities against some pathogenic bacterial and fungal species by the agar well diffusion method. The in vitro antioxidant activities of 5-Fluorouracil and its complexes have also been investigated by using the DPPH assay method. The results demonstrate that Cu(II) mixed ligand complexes (4-6) exhibit potent biological as well as antioxidant activities compared to 5-Fluorouracil and Ni(II) (1-3) and Zn(II) (7-9) mixed ligand complexes. Further, the cleaving activities of CT DNA under aerobic conditions show moderate activity with the synthesized Cu(II) and Ni(II) mixed ligand complexes (1-6) while no activity is seen with Zn(II) complexes (7-9). Binding studies of CT DNA with these complexes show a decrease in intensity of the charge transfer band to the extent of 5-15% along with a minor red shift. The free energy change values (Δ‡G) calculated from intrinsic binding constants indicate that the interaction between mixed ligand complex and DNA is spontaneous.

  2. Synthesis, structural elucidation, biological, antioxidant and nuclease activities of some 5-Fluorouracil-amino acid mixed ligand complexes.

    PubMed

    Shobana, Sutha; Subramaniam, Perumal; Mitu, Liviu; Dharmaraja, Jeyaprakash; Arvind Narayan, Sundaram

    2015-01-05

    Some biologically active mixed ligand complexes (1-9) have been synthesized from 5-Fluorouracil (5-FU; A) and amino acids (B) such as glycine (gly), L-alanine (ala) and L-valine (val) with Ni(II), Cu(II) and Zn(II) ions. The synthesized mixed ligand complexes (1-9) were characterized by various physico-chemical, spectral, thermal and morphological studies. 5-Fluorouracil and its mixed ligand complexes have been tested for their in vitro biological activities against some pathogenic bacterial and fungal species by the agar well diffusion method. The in vitro antioxidant activities of 5-Fluorouracil and its complexes have also been investigated by using the DPPH assay method. The results demonstrate that Cu(II) mixed ligand complexes (4-6) exhibit potent biological as well as antioxidant activities compared to 5-Fluorouracil and Ni(II) (1-3) and Zn(II) (7-9) mixed ligand complexes. Further, the cleaving activities of CT DNA under aerobic conditions show moderate activity with the synthesized Cu(II) and Ni(II) mixed ligand complexes (1-6) while no activity is seen with Zn(II) complexes (7-9). Binding studies of CT DNA with these complexes show a decrease in intensity of the charge transfer band to the extent of 5-15% along with a minor red shift. The free energy change values (Δ(‡)G) calculated from intrinsic binding constants indicate that the interaction between mixed ligand complex and DNA is spontaneous.

  3. Cationic lanthanide complexes of neutral tripodal N,O ligands: enthalpy versus entropy-driven podate formation in water.

    PubMed

    Bravard, Florence; Rosset, Caroline; Delangle, Pascale

    2004-07-07

    The cationic lanthanide complexes of two neutral tripodal N,O ligands, tpa (tris[(2-pyridyl)methyl]amine) and tpaam (tris[6-((2-N,N-diethylcarbamoyl)pyridyl)methyl]amine) are studied in water. The analysis of the proton lanthanide induced NMR shifts indicate that there is no abrupt structural change in the middle of the rare-earth series. Unexpectedly, the formation constant values of the lanthanide podates of tpaam and tpa in D2O at 298 K are similar, suggesting that the addition of the three amide groups to the ligand tpa does not lead to any increase in stability of the lanthanide complexes of tpaam in respect to tpa, even though the amide groups are coordinated to the metal in aqueous solution. The measurement of the enthalpy and entropy changes of the complexation reactions shows that the two similar ligands tpa and tpaam have different driving forces for lanthanide complexation. Indeed, the formation of tpa podates benefits from an exothermic enthalpy change associated with a small entropy change, whereas the complexation reaction with tpaam is clearly entropy-driven though opposed by a positive enthalpy change. The hydration states of the europium complexes were measured by luminescence and show the coordination of 4-5 water ligands in [Eu(tpa)]3+ whereas there are only 2 in [Eu(tpaam)]3+. Therefore the heptadentate ligand tpaam releases the translational entropy of more water molecules than does the tetradentate ligand tpa.

  4. Luminescent complexes of iridium(III) containing N/\\C/\\N-coordinating terdentate ligands.

    PubMed

    Wilkinson, Andrew J; Puschmann, Horst; Howard, Judith A K; Foster, Clive E; Williams, J A Gareth

    2006-10-16

    A family of bis-terdentate iridium(III) complexes is reported which contain a cyclometalated, N/\\C[wedge]N-coordinating 1,3-di(2-pyridyl)benzene derivative. This coordination mode is favored by blocking competitive cyclometalation at the C4 and C6 positions of the ligand. Thus, 1,3-di(2-pyridyl)-4,6-dimethylbenzene (dpyxH) reacts with IrCl3 x 3H2O to generate a dichlorobridged dimer [Ir(dpyx-N,C,N)Cl(mu-Cl)]2, 1. This dimer is cleaved by DMSO to give [Ir(dpyx)(DMSO)Cl2], the X-ray crystal structure of which is reported here, confirming the N/\\C/\\N coordination mode of dpyx. The dimer 1 can also be cleaved by a variety of other ligands to generate novel classes of mononuclear complexes. These include charge-neutral bis-terdentate complexes of the form [Ir(N/\\C/\\N)(C/\\N/\\C)] and [Ir(N/\\C/\\N)(C/\\N/\\O)], by reaction of 1 with C/\\N/\\C-coordinating ligands (e.g., 2,6-diphenylpyridine and derivatives) and C/\\N/\\O-coordinating ligands (based on 6-phenylpicolinate), respectively. Treatment of 1 with terpyridines leads to dicationic complexes of the type [Ir(N/\\C/\\N)(N/\\N/\\N)]2+, while 2-phenylpyridine gives [Ir(dpyx-N/\\C/\\N)(ppy-C,N)Cl]. All of the charge-neutral complexes are luminescent in fluid solution at room temperature. Assignment of the emission to charge-transfer excited states with significant MLCT character is supported by DFT calculations. In the [Ir(N/\\C/\\N)(C/\\N/\\C)] class, fluorination of the C/\\N/\\C ligand at the phenyl 2' and 4' positions leads to a blue-shift in the emission and to an increase in the quantum yield (lambda(max) = 547 nm, phi = 0.41 in degassed CH(3)CN at 295 K) compared to the nonfluorinated parent complex (lambda(max) = 585 nm, phi = 0.21), as well as to a stabilization of the compound with respect to photodissociation through cleavage of mutually trans Ir-C bonds. [Ir(dpyx-N/\\C/\\N)(ppy-C,N)Cl] is an exceptionally bright emitter: phi = 0.76, lambda(max) = 508 nm, in CH(3)CN at 295 K. In contrast, the [Ir

  5. Antibacterial activity of Pd(II) complexes with salicylaldehyde-amino acids Schiff bases ligands.

    PubMed

    Rîmbu, Cristina; Danac, Ramona; Pui, Aurel

    2014-01-01

    Palladium(II) complexes with Schiff bases ligands derived from salicylaldehyde and amino acids (Ala, Gly, Met, Ser, Val) have been synthesized and characterized by Fourier transform (FT)-IR, UV-Vis and (1)H-NMR spectroscopy. The electrospray mass spectrometry (ES-MS) spectrometry confirms the formation of palladium(II) complexes in 1/2 (M/L) molar ratio. All the Pd(II) complexes 1, [Pd(SalAla)2]Cl2; 2, [Pd(SalGly)2]Cl2; 3, [Pd(SalMet)2]Cl2; 4, [Pd(SalSer)2]Cl2; 5, [Pd(SalVal)2]Cl2; have shown antibacterial activity against Gram-positive bacteria Staphylococcus aureus and Gram-negative bacteria Escherichia coli.

  6. Catalytic transformation of dinitrogen into ammonia and hydrazine by iron-dinitrogen complexes bearing pincer ligand

    PubMed Central

    Kuriyama, Shogo; Arashiba, Kazuya; Nakajima, Kazunari; Matsuo, Yuki; Tanaka, Hiromasa; Ishii, Kazuyuki; Yoshizawa, Kazunari; Nishibayashi, Yoshiaki

    2016-01-01

    Synthesis and reactivity of iron-dinitrogen complexes have been extensively studied, because the iron atom plays an important role in the industrial and biological nitrogen fixation. As a result, iron-catalyzed reduction of molecular dinitrogen into ammonia has recently been achieved. Here we show that an iron-dinitrogen complex bearing an anionic PNP-pincer ligand works as an effective catalyst towards the catalytic nitrogen fixation, where a mixture of ammonia and hydrazine is produced. In the present reaction system, molecular dinitrogen is catalytically and directly converted into hydrazine by using transition metal-dinitrogen complexes as catalysts. Because hydrazine is considered as a key intermediate in the nitrogen fixation in nitrogenase, the findings described in this paper provide an opportunity to elucidate the reaction mechanism in nitrogenase. PMID:27435503

  7. [Introduction of dinitrosyl iron complexes with thiol-containing ligands into animal organism by inhalation method].

    PubMed

    Vanin, A F; Mozhokina, G N; Tkachev, N A; Mikoian, V D; Borodulin, R R; Elistratova, N A

    2013-01-01

    The possibility of water-soluble dinitrosyl iron complexes (DNIC) with thiol-containing ligands introduction into lungs and other tissues of mice by free inhalation of little drops (2-3 microns diameter) of the solutions of these complexes was investigated. Little drops of 2-20 mM solutions of the complexes were obtained by using an inhalation apparatus (compressor nebulizer). A cloud of these little drops was then inhaled by animals in a closed chamber. A maximal amount of protein-bound DNICs formed in mouse lungs was 0.6 micromoles per kilogram of tissue weight. The amount of DNIC in lungs, liver and blood decreased to the undetected level within 2-3 hours after inhalation. No cytotoxic effect of DNIC formed in lungs on Mycobacterium tuberculosis was found in mice infected with these mycobacteria.

  8. Structure, Spectra, and DFT Simulation of Nickel Benzazolate Complexes with Tris(2-aminoethyl)amine Ligand.

    PubMed

    Cerezo, Javier; Requena, Alberto; Zúñiga, José; Piernas, María José; Santana, M Dolores; Pérez, José; García, Luís

    2017-03-20

    Benzazolate complexes of Ni(II), [Ni(pbz)(tren)]ClO4 (pbz = 2-(2'-hydroxyphenyl)-benzimidazole (pbm), 1, 2-(2'-hydroxyphenyl)-benzoxazole (pbx), 2, 2-(2'-hydroxyphenyl)-benzothiazole (pbt), 3; tren = tris(2-aminoethyl)amine), are prepared by self-assembly reaction and structurally characterized. Theoretical DFT simulations are carried out to reproduce the features of their crystal structures and their spectroscopic and photophysic properties. The three complexes are moderately luminescent at room temperature both in acetonitrile solution and in the solid state. The simulations indicate that the absorption spectrum is dominated by two well-defined transitions, and the electronic density concentrates in three MOs around the benzazole ligands. The Stokes shifts of the emission spectra of complexes 1-3 are determined by optimizing the electronic excited state.

  9. Synthesis, crystal structures and spectroscopic properties of cobalt(II) complexes with chelating sulfonylamidophosphate ligands

    NASA Astrophysics Data System (ADS)

    Znovjyak, Kateryna O.; Seredyuk, Maksym; Kusz, Joachim; Nowak, Maria; Moroz, Olesia V.; Sliva, Tetiana Yu; Amirkhanov, Vladimir M.

    2015-11-01

    Two new cobalt(II) complexes with general formula Co(L1)2Phen (1) and Co(L2)2Phen (2), in which HL1 = dimethyl phenylsulfonylphosphoramidate and HL2 = dimethyl tosylphosphoramidate, were prepared in one-step synthesis and characterized by IR, UV-VIS spectroscopy, TGA-DTA and elemental analysis. Moreover, the single crystal structures of 1 and 2 were determined by single crystal X-ray diffractometry. Complexes consist of mononuclear units comprising two L1-(or L2-) and phenanthroline ligands bidentatly linked to metal ion. The UV-VIS spectra of complexes in the solid state show broad asymmetric band at 530 nm attributed to the d-d transition of the metal ion. Comparing of these spectra with the absorption spectra in acetone, octahedral environment of the cobalt(II) ion in solution were considered. The structural similarity of 1 and 2 leads to a similar thermal decomposition profile.

  10. Ruthenium Bis-diimine Complexes with a Chelating Thioether Ligand: Delineating 1,10-Phenanthrolinyl and 2,2'-Bipyridyl Ligand Substituent Effects

    SciTech Connect

    Al-Rawashdeh, Nathir A. F.; Chatterjee, Sayandev; Krause, Jeanette A.; Connick, William B.

    2014-01-06

    A new series of ruthenium(II) bis-diimine complexes with a chelating thioether donor ligand has been prepared: Ru(diimine)2(dpte)2+ (diimine=1,10-phenanthroline (phen) (1); 5-CH3-phen (2), 5-Cl-phen (3); 5-Br-phen (4); 5-NO2-phen (5); 3,4,7,8-tetramethyl-phen (6); 4,7-diphenyl-phen (7); 5,5'-dimethyl-2,2'-bipyridine (8); 4,4'-di-tert-butyl-2,2'-bipyridine (9)). Crystal structures of 2, 5, 7 and 9 show that the complexes form 2 of the 12 possible conformational/configurational isomers, adopting compact C2-symmetric structures with short intramolecular transannular interactions between the diimine ligands and dpte phenyl groups; crystals of 2 and 5 contain non-statistical distributions of geometric isomers. In keeping with the π-acidity of the dpte, the Ru(III/II) couple, E°'(Ru3+/2+), occurs at relatively high potentials (1.4-1.7 V vs Ag/AgCl), and the lowest spin-allowed MLCT absorption band occurs near 400 nm. Surprisingly, the complexes also exhibit fluid-solution luminescence originating from a lowest MLCT excited state with lifetimes in the 140-750 ns time range; in acetonitrile, compound 8 undergoes photo-induced solvolysis. Variations in the MLCT energies and redox potentials are quantitatively described using a summative Hammett parameter (σT), as well as using Lever's electrochemical parameters (EL). Recommended parameterizations for 2,2'-bipyridyl and 1,10-phenanthrolinyl ligands were derived from analysis of correlations based on 199 measurements of E°'(Ru3+/2+) for 99 homo- and heteroleptic ruthenium(II) tris-diimine complexes. Variations in E°'(Ru3+/2+) due to substituents at the 4- and 4'-positions of bipyridyl ligands and 4- and 7-positions of phenanthrolinyl ligands are significantly more strongly correlated with σp+ than either σm or σp. Substituents at the 5- and 6-positions of phenanthrolinyl ligands are best described by σm and have effects comparable to those of substituents at the 3- and 8-positions. Correlations of EL with σT for 20

  11. Syntheses, crystal structures, and properties of four complexes based on polycarboxylate and imidazole ligands

    NASA Astrophysics Data System (ADS)

    Qiao, Rui; Chen, Shui-Sheng; Sheng, Liang-Quan; Yang, Song; Li, Wei-Dong

    2015-08-01

    Four metal-organic coordination polymers [Zn(HL)(H2O)]·4H2O (1), [Zn(HL)(L1)]·4H2O (2), [Cu(HL)(H2O)]·3H2O (3) and [Cu(HL)(L1)]·5H2O (4) were synthesized by reactions of the corresponding metal(II) salts with semirigid polycarboxylate ligand (5-((4-carboxypiperidin-1-yl)methyl)isophthalic acid hydrochloride, H3L·HCl) or auxiliary ligand (1,4-di(1H-imidazol-4-yl)benzene, L1). The structures of the compounds were characterized by elemental analysis, FT-IR spectroscopy and single-crystal X-ray diffraction. The use of auxiliary ligand L1 has great influence on the structures of two pairs of complexes 1, 2 and 3, 4. Complex 1 is a uninodal 3-connected rare 2-fold interpenetrating ZnSc net with a Point (Schlafli) symbol of (103) while 2 is a one-dimensional (1D) ladder structure. Compound 3 features a two-dimensional (2D) honeycomb network with typical 63-hcb topology, while 4 is 2D network with (4, 4) sql topology based on binuclear CuII subunits. The non-covalent bonding interactions such as hydrogen bonds, π···π stacking and C-H···π exist in complexes 1-4, which contributes to stabilize crystal structure and extend the low-dimensional entities into high-dimensional frameworks. And the photoluminescent property of 1 and 2 and gas sorption property of 4 have been investigated.

  12. Formation and structure of the first metal complexes comprising amidino­guanidinate ligands

    PubMed Central

    Sroor, Farid M.; Liebing, Phil; Hrib, Cristian G.; Gräsing, Daniel; Hilfert, Liane; Edelmann, Frank T.

    2016-01-01

    The first metal complexes comprising amidino­guanidinate ligands have been prepared and structurally characterized, namely bis­[μ-N,N′,N′′,N′′′-tetraisopropyl-1-(1-butyl­amidinato)guanidinato-κ3 N 1,N 2:N 2]bis­[(tetra­hydro­furan)lithium], [Li2(C18H37N4)2(C4H8O)2], (2), and [bis­(tetra­hydro­furan)­lithium]-di-μ-chlorido-{(N,N′-di­cyclo­hexyl-1-butyl­amidinato-κ2 N 1,N 2)[N,N′,N′′,N′′′-tetra­cyclo­hexyl-1-(1-butyl­amidinato)guanidinato-κ2 N 1,N 2]holmate(III)}, [HoLiCl2(C4H8O)2(C17H31N2)(C30H53N4)], (3). The novel lithium amidino­guanidinate precursors Li[nBuC(=NR)(NR)C(NR)2] [1: R = Cy (cyclo­hex­yl), 2: R = iPr) were obtained by treatment of N,N′-diorganocarbodi­imides, R—N=C=N—R (R = iPr, Cy), with 0.5 equivalents of n-butyl­lithium under well-defined reaction conditions. An X-ray diffraction study of 2 revealed a ladder-type dimeric structure in the solid state. Reaction of anhydrous holmium(III) chloride with in situ-prepared 2 afforded the unexpected holmium ‘ate’ complex [nBuC(=NCy)(NCy)C(NCy)2]Ho[nBuC(NCy)2](μ-Cl)2Li(THF)2 (3) in 71% yield. An X-ray crystal structure determination of 3 showed that this complex contains both an amidinate ligand and the new amidino­guanidinate ligand. PMID:27840700

  13. New RuII Complex for Dual Activity: Photoinduced Ligand Release and 1O2 Production

    PubMed Central

    Loftus, Lauren M.; White, Jessica K.; Albani, Bryan A.; Kohler, Lars; Kodanko, Jeremy J.; Thummel, Randolph P.

    2016-01-01

    The new complex [Ru(pydppn)(biq)(py)]2+ (1) undergoes both py photodissociation in CH3CN with Φ500=0.0070(4) and 1O2 production with ΦΔ=0.75(7) in CH3OH from a long-lived 3ππ* state centered on the pydppn ligand (pydppn=3-(pyrid-2-yl)benzo[i]dipyrido[3,2-a:2′,3′-c]phenazine; biq = 2,2′-biquinoline; py= pyridine). This represents an order of magnitude decrease in the Φ500 compared to the previously reported model compound [Ru(tpy)(biq)(py)]2+ (3) (tpy=2,2′:6′,2″-terpyridine) that undergoes only ligand exchange. The effect on the quantum yields by the addition of a second deactivation pathway through the low-lying 3ππ* state necessary for dual reactivity was investigated using ultrafast and nanosecond transient absorption spectroscopy, revealing a significantly shorter 3MLCT lifetime in 1 relative to that of the model complex 3. Due to the structural similarities between the two compounds, the lower values of Φ500 and ΦΔ compared to that of [Ru(pydppn)(bpy)(py)]2+ (2) (bpy=2,2′-bipyridine) are attributed to a competitive excited state population between the 3LF states involved in ligand dissociation and the long-lived 3ππ* state in 1. Complex 1 represents a model compound for dual activity that may be applied to photochemotherapy. PMID:26715085

  14. Iridium dihydroxybipyridine complexes show that ligand deprotonation dramatically speeds rates of catalytic water oxidation.

    PubMed

    DePasquale, Joseph; Nieto, Ismael; Reuther, Lauren E; Herbst-Gervasoni, Corey J; Paul, Jared J; Mochalin, Vadym; Zeller, Matthias; Thomas, Christine M; Addison, Anthony W; Papish, Elizabeth T

    2013-08-19

    We report highly active iridium precatalysts, [Cp*Ir(N,N)Cl]Cl (1-4), for water oxidation that are supported by recently designed dihydroxybipyridine (dhbp) ligands. These ligands can readily be deprotonated in situ to alter the electronic properties at the metal; thus, these catalyst precursors have switchable properties that are pH-dependent. The pKa values in water of the iridium complexes are 4.6(1) and 4.4(2) with (N,N) = 6,6'-dhbp and 4,4'-dhbp, respectively, as measured by UV-vis spectroscopy. For homogeneous water oxidation catalysis, the sacrificial oxidant NaIO4 was found to be superior (relative to CAN) and allowed for catalysis to occur at higher pH values. With NaIO4 as the oxidant at pH 5.6, water oxidation occurred most rapidly with (N,N) = 4,4'-dhbp, and activity decreased in the order 4,4'-dhbp (3) > 6,6'-dhbp (2) ≫ 4,4'-dimethoxybipyridine (4) > bipy (1). Furthermore, initial rate studies at pH 3-6 showed that the rate enhancement with dhbp complexes at high pH is due to ligand deprotonation rather than the pH alone accelerating water oxidation. Thus, the protic groups in dhbp improve the catalytic activity by tuning the complexes' electronic properties upon deprotonation. Mechanistic studies show that the rate law is first-order in an iridium precatalyst, and dynamic light scattering studies indicate that catalysis appears to be homogeneous. It appears that a higher pH facilitates oxidation of precatalysts 2 and 3 and their [B(Ar(F))4](-) salt analogues 5 and 6. Both 2 and 5 were crystallographically characterized.

  15. Dinuclear triple-stranded complexes of ReV with bis(benzene-o-dithiolato) ligands

    NASA Astrophysics Data System (ADS)

    Gancheff, Jorge S.; Hahn, F. Ekkehardt

    2012-12-01

    The reaction of K2ReCl6 with 1,2-bis(2,3-dimercaptobenzamido)ethane (H4-1), and 1,2-bis(2,3-dimercaptobenzamido)benzene (H4-2) in the presence of Na2CO3 in methanol affords dinuclear complexes of ReV. Experimental evidence supports the presence of self-assembled complexes with two {Re(S2C6H3)3} units connected in a triple-stranded fashion. Density Functional Theory (DFT) studies on geometry and electronic properties were conducted employing the hybrid B3LYP and PBE1PBE functionals. The helical (ΔΔ and ΛΛ) and meso-helical (ΔΛ) isomers were considered. For the helicate complexes included in this study, differences in the stability of the isomers were observed originating in different steric and strain interactions between the three ligand strands. The geometries at the minimum exhibit a distorted trigonal-prismatic coordination environment at the metal centers. Natural bond orbitals (NBO) analysis indicates the presence of Re-S bonds which are strongly polarized toward the non-metal. Time-Dependent DFT (TD-DFT) calculations were performed for a further understanding of the optical spectra. The calculations show the occupied 5d orbitals of the rhenium lying beneath occupied sulfur-based MOs. The general features of the electronic spectra in the visible region are reasonably reproduced by the calculations. The analysis of molecular orbitals also allows the assignment of the origin for all experimentally detected absorption bands. In the high-energy region of the spectrum the absorptions are attributed to ligand-to-metal-ligand charge transfer (LMLCT), in which sulfur-based orbitals and unoccupied orbitals at the rhenium atom and the benzene-o-dithiolato groups are involved. Also in the blue region, shoulders originating from LMLCT are observed.

  16. Dinuclear triple-stranded complexes of Re(V) with bis(benzene-o-dithiolato) ligands.

    PubMed

    Gancheff, Jorge S; Hahn, F Ekkehardt

    2012-12-01

    The reaction of K(2)ReCl(6) with 1,2-bis(2,3-dimercaptobenzamido)ethane (H(4)-1), and 1,2-bis(2,3-dimercaptobenzamido)benzene (H(4)-2) in the presence of Na(2)CO(3) in methanol affords dinuclear complexes of Re(V). Experimental evidence supports the presence of self-assembled complexes with two {Re(S(2)C(6)H(3))(3)} units connected in a triple-stranded fashion. Density Functional Theory (DFT) studies on geometry and electronic properties were conducted employing the hybrid B3LYP and PBE1PBE functionals. The helical (ΔΔ and ΛΛ) and meso-helical (ΔΛ) isomers were considered. For the helicate complexes included in this study, differences in the stability of the isomers were observed originating in different steric and strain interactions between the three ligand strands. The geometries at the minimum exhibit a distorted trigonal-prismatic coordination environment at the metal centers. Natural bond orbitals (NBO) analysis indicates the presence of Re-S bonds which are strongly polarized toward the non-metal. Time-Dependent DFT (TD-DFT) calculations were performed for a further understanding of the optical spectra. The calculations show the occupied 5d orbitals of the rhenium lying beneath occupied sulfur-based MOs. The general features of the electronic spectra in the visible region are reasonably reproduced by the calculations. The analysis of molecular orbitals also allows the assignment of the origin for all experimentally detected absorption bands. In the high-energy region of the spectrum the absorptions are attributed to ligand-to-metal-ligand charge transfer (LMLCT), in which sulfur-based orbitals and unoccupied orbitals at the rhenium atom and the benzene-o-dithiolato groups are involved. Also in the blue region, shoulders originating from LMLCT are observed. Copyright © 2012 Elsevier B.V. All rights reserved.

  17. Formation and structure of the first metal complexes comprising amidino-guanidinate ligands.

    PubMed

    Sroor, Farid M; Liebing, Phil; Hrib, Cristian G; Gräsing, Daniel; Hilfert, Liane; Edelmann, Frank T

    2016-11-01

    The first metal complexes comprising amidino-guanidinate ligands have been prepared and structurally characterized, namely bis-[μ-N,N',N'',N'''-tetraisopropyl-1-(1-butyl-amidinato)guanidinato-κ(3)N(1),N(2):N(2)]bis-[(tetra-hydro-furan)lithium], [Li2(C18H37N4)2(C4H8O)2], (2), and [bis-(tetra-hydro-furan)-lithium]-di-μ-chlorido-{(N,N'-di-cyclo-hexyl-1-butyl-amidinato-κ(2)N(1),N(2))[N,N',N'',N'''-tetra-cyclo-hexyl-1-(1-butyl-amidinato)guanidinato-κ(2)N(1),N(2)]holmate(III)}, [HoLiCl2(C4H8O)2(C17H31N2)(C30H53N4)], (3). The novel lithium amidino-guanidinate precursors Li[ (n) BuC(=NR)(NR)C(NR)2] [1: R = Cy (cyclo-hex-yl), 2: R = (i) Pr) were obtained by treatment of N,N'-diorganocarbodi-imides, R-N=C=N-R (R = (i) Pr, Cy), with 0.5 equivalents of n-butyl-lithium under well-defined reaction conditions. An X-ray diffraction study of 2 revealed a ladder-type dimeric structure in the solid state. Reaction of anhydrous holmium(III) chloride with in situ-prepared 2 afforded the unexpected holmium 'ate' complex [ (n) BuC(=NCy)(NCy)C(NCy)2]Ho[ (n) BuC(NCy)2](μ-Cl)2Li(THF)2 (3) in 71% yield. An X-ray crystal structure determination of 3 showed that this complex contains both an amidinate ligand and the new amidino-guanidinate ligand.

  18. Recognition forces in ligand-protein complexes: blending information from different sources.

    PubMed

    Ermondi, Giuseppe; Caron, Giulia

    2006-12-15

    A variety of ligands interact with proteins in many biological processes; shape complementarity, electrostatic forces and hydrophobicity are the main factors governing these interactions. Although this is accepted by the scientific community, confusion about the significance of certain terms (e.g. hydrophobicity, salt bridge) and the difficulty of discussing the balance of acting forces rather than their single contributions, are two of the main problems encountered by researchers working in the field. These difficulties are sometimes enhanced by the unskilled use of informatics tools, which give great help in understanding the topic (especially from the visual standpoint), but only if used critically. After explaining some general chemical concepts, the commentary discusses the main forces governing ligand-protein interactions, focusing on those generating confusion among scientists with different backgrounds. Three examples of ligand-protein interactions are then discussed to illustrate the advantages and drawbacks of some in silico tools, highlighting the main interactions responsible for complex formation. The same examples are used to point out the limits in separating forces that are mandatory for occurrence of a given interaction and additional forces.

  19. Guidelines for the successful generation of protein–ligand complex crystals

    PubMed Central

    Müller, Ilka

    2017-01-01

    With continuous technical improvements at synchrotron facilities, data-collection rates have increased dramatically. This makes it possible to collect diffraction data for hundreds of protein–ligand complexes within a day, provided that a suitable crystal system is at hand. However, developing a suitable crystal system can prove challenging, exceeding the timescale of data collection by several orders of magnitude. Firstly, a useful crystallization construct of the protein of interest needs to be chosen and its expression and purification optimized, before screening for suitable crystallization and soaking conditions can start. This article reviews recent publications analysing large data sets of crystallization trials, with the aim of identifying factors that do or do not make a good crystallization construct, and gives guidance in the design of an expression construct. It provides an overview of common protein-expression systems, addresses how ligand binding can be both help and hindrance for protein purification, and describes ligand co-crystallization and soaking, with an emphasis on troubleshooting. PMID:28177304

  20. Photophysics of self-assembled zinc porphyrin-bidentate diamine ligand complexes.

    PubMed

    Danger, Brook R; Bedient, Krysta; Maiti, Manisankar; Burgess, Ian J; Steer, Ronald P

    2010-10-21

    The effects of complexation--by bidentate nitrogen-containing ligands such as pyrazine and 4,4'-bipyridine commonly used for porphyrin self-assembly--on the photophysics of the model metalloporphyrin, ZnTPP, are reported. Ligation to form the 5-coordinate species introduces an intramolecular charge transfer (ITC) state that, depending on the oxidation and reduction potentials of the electron donor and acceptor, can become involved in the excited state relaxation processes. For ZnTPP, ligation with pyridine has little effect on excited state relaxation following either Q-band or Soret band excitation. However, coordination of ZnTPP with pyrazine and bipyridine causes the S(2) (Soret) state of the ligated species to decay almost exclusively via an S(2)-ICT-S(1) pathway, while affecting the S(1) decay route only slightly. In these 5-coordinate species the S(2)-ICT-S(1) decay route is ultrafast and nearly quantitative. Literature redox data for other bidentate ligands such as DABCO and multidentate ligands commonly used for pophyrin assembly suggest that the ITC states introduced by them could also modify the excited state relaxation dynamics of a wide variety of multiporphyrin arrays.

  1. Lead Halide Perovskites and Other Metal Halide Complexes As Inorganic Capping Ligands for Colloidal Nanocrystals

    PubMed Central

    2014-01-01

    Lead halide perovskites (CH3NH3PbX3, where X = I, Br) and other metal halide complexes (MXn, where M = Pb, Cd, In, Zn, Fe, Bi, Sb) have been studied as inorganic capping ligands for colloidal nanocrystals. We present the methodology for the surface functionalization via ligand-exchange reactions and the effect on the optical properties of IV–VI, II–VI, and III–V semiconductor nanocrystals. In particular, we show that the Lewis acid–base properties of the solvents, in addition to the solvent dielectric constant, must be properly adjusted for successful ligand exchange and colloidal stability. High luminescence quantum efficiencies of 20–30% for near-infrared emitting CH3NH3PbI3-functionalized PbS nanocrystals and 50–65% for red-emitting CH3NH3CdBr3- and (NH4)2ZnCl4-capped CdSe/CdS nanocrystals point to highly efficient electronic passivation of the nanocrystal surface. PMID:24746226

  2. Metalloligands containing aminofulvene-aldiminate (AFA) ligands and their bimetallic complexes.

    PubMed

    Bailey, Philip J; Rahman, Mahmudur; Parsons, Simon; Azhar, Muhammad R; White, Fraser J

    2013-02-28

    A simple and convenient route to η(5)-coordinated Ru and Rh aminofulvene-aldiminate (AFA) complexes is described. The metalloligands [Cp*Ru{η(5)-(Ph(2)AFAH)}][BF(4)] (3), [Cp*Ru{η(5)-(benzyl(2)AFAH)}][OTf] (7), [Cp*Rh{η(5)-(Cy(2)AFA)H}][BF(4)](2) (8) and [Cp*Rh{η(5)-(Cy(2)AFA)}][BF(4)] (9) have been synthesised and characterised. The basicity of 9 has been found to be significantly less than its neutral analogue and thus eliminates the need for a deprotonation step to ligate to a second metal in the κ(2)-N,N'-coordination mode. The reaction of 9 with a palladium precursor provides a mixed-metal complex [Cp*Rh(η(5)/κ(2)-Cy(2)AFA)PdCl(2)][BF(4)] (12). Cyclic voltammetry studies of the Ph(2)AFAH ligand shows an irreversible one electron oxidation peak at +1.0 V (vs. Fc/Fc(+)). Complex 3 shows an irreversible oxidation at +1.5 V and a reduction peak at -1.0 V. The oxidation of 3 occurs on the AFA ligand backbone whereas the structurally analogous neutral 1,2-bis(imidoyl)pentamethyl-ruthenocene shows reversible oxidation at the Ru center.

  3. Metal complexes of a new bis(salicylidene) bicycle diamine ligand

    SciTech Connect

    Sweet, M.P.; Barkigia, K.M.; Mease, R.C.; Srivastava, S.C.

    1997-12-31

    The rigidity of cis-endo-2,3-diaminobicyclo[2.2.2]oct-5-ene (1) locks the nitrogens into spatial positions that are favorable to metal binding and should result in thermodynamically and kinetically more stable metal ligand complexes. Condensation of 1 and salicylaldehyde affords the N,N{prime}-bis(salicyclidene)-cis-endo-2,3-diamino-bicyclo[2.2.2]oct-5-ene (2) in high yield. X-ray diffraction of 2 shows that the nitrogens are cis and endo and that the phenolic hydrogens are hydrogen bonded to the nitrogens. The ligand 2 was found to form neutral complexes with divalent metals such as cobalt, nickel, and copper. X-ray crystal studies of the nickel complex (which contains one CHCl{sub 3} per Ni) showed a square planar arrangement of the coordinating groups around the metal. The nickel and the salicyclidene moieties roughly lie in the plane defined by carbons 2 and 3 and the two nitrogens.

  4. Single-chain self-folding of synthetic polymers induced by metal-ligand complexation.

    PubMed

    Willenbacher, Johannes; Altintas, Ozcan; Roesky, Peter W; Barner-Kowollik, Christopher

    2014-01-01

    The controlled folding of a single polymer chain is for the first time realized by metal- complexation. α,ω-Bromine functional linear polymers are prepared via activators regenerated by electron transfer (ARGET) ATRP (M¯n,SEC = 5900 g mol(-1) , Đ = 1.07 and 12 000 g mol(-1) , Đ = 1.06) and the end groups of the polymers are subsequently converted to azide functionalities. A copper-catalyzed azide-alkyne cycloaddition (CuAAC) reaction is carried out in the presence of a novel triphenylphosphine ligand and the polymers to afford homotelechelic bis-triphenylphosphine polymeric-macroligands (MLs) (M¯n,SEC = 6600 g mol(-1) , Đ = 1.07, and 12 800 g mol(-1) , Đ = 1.06). Single-chain metal complexes (SCMCs) are formed in the presence of Pd(II) ions in highly diluted solution at ambient temperature. The results derived via (1) H and (31) P{(1) H} NMR experiments, SEC, and DLS unambiguously evidence the efficient formation of SCMCs via metal ligand complexation. © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  5. Transition metal complexes of the pyridylphosphine ligand o-C6H4(CH2PPy2)2.

    PubMed

    Vaughan, Teresa F; Spencer, John L

    2016-11-14

    The synthesis and coordination behaviour of the pyridylphosphine ligand o-C6H4(CH2PPy2)2 (Py = 2-pyridyl) are reported. The phosphine selenide was synthesised and the (1)JPSe value of 738 Hz indicates the phosphorus atoms have a similar basicity to PPh3. The ligand reacts with platinum(ii) and palladium(ii) complexes to give simple diphosphine complexes of the type [MX2(PP)] (M = Pt, X = Cl, I, Me, Et; M = Pd, X = Cl, Me). When the ligand is reacted with chloromethyl(hexa-1,5-diene)platinum the [PtClMe(PP)] complex results, from which a series of unsymmetrical platinum complexes of the type [PtMeL(PP)](+) (L = PPh3, PTA, SEt2 and pyridine) can be made. This enabled the comparison of the cis and trans influences of a range of ligands. The following cis influence series was compiled based on (31)P NMR data of these complexes: Py ≈ Cl > SEt2 > PTA > PPh3. Reaction of [PtClMe(PP)] with NaCH(SO2CF3)2 and carbon monoxide slowly formed an acyl complex, where the CO had inserted in the Pt-Me bond. Attempts to achieve P,P,N chelation, through abstracting the chloride ligand in [PtClMe(PP)], were unsuccessful. When the ligand reacted with platinum(0), palladium(0) and silver(i) complexes the bis-chelated complexes [M(PP)2] (M = Pt, Pd) and [Ag(PP)2](+) were formed respectively. Reaction of the ligand with [Ir(COD)(μ-Cl)]2 formed [IrCl(PP)(COD)]. When the chloride ligand was abstracted, the pyridyl nitrogens were able to interact with the iridium centre facilitating the isomerisation of the 1,2,5,6-η(4)-COD ligand to a 1-κ-4,5,6-η(3)-C8H12 ligand. The X-ray crystal structure of [Ir(1-κ-4,5,6-η(3)-C8H12)(PPN)]BPh4 confirmed the P,P,N chelation mode of the ligand. In solution, this complex displayed hemilabile behaviour, with the pyridyl nitrogens exchanging at a rate faster than the NMR time scale at room temperature.

  6. Synthesis, structure, spectral properties and theoretical studies of two half-sandwich titanium-complexes with adamantoxy ligands

    NASA Astrophysics Data System (ADS)

    Varga, Vojtech; Mach, Karel; Pinkas, Jiří; Kubišta, Jiří; Szarka, Katarína; Gyepes, Róbert

    2017-08-01

    Two novel half-sandwich Ti complexes, both incorporating two adamantoxy (OAd) ligands coordinated to their central atoms were synthesized. The complexes were characterized by 1H, 13C, 19F NMR, EI-MS and IR spectroscopy and by single-crystal X-ray diffraction. In both complexes, the coordination environment is pseudo-tetrahedral and is assembled of two O-coordinated adamantoxy and one η5-coordinated permethylcyclopentadienyl ligand. The fourth ligand in complex 1 is a methyl group coordinated through a regular σ-bond, whereas in complex 2 the same coordination site is occupied by the methyl group of the balancing (C6F5)3BMeˉ anion. DFT computations complemented with NBO analyses of 2 have unveiled, that in addition to the electrostatic interactions occurring between the half-sandwich titanocene moiety and the anionic ligand, delocalization of one methyl Csbnd H bond into the available acceptor orbital on the central atom takes place. AIM analyses of 2 have revealed the presence of a Bond Critical Point between the metal atom and the anionic methyl group. These results prove foundation for the description of 2 as a zwitterionic complex coupled with a concurrent Ti⋯Csbnd H agostic interaction in its molecule. The comparison of 2 with its analogous complex equipped with two Ot-Bu ligands instead of both OAd has suggested only a minor change in the extent of the agostic interaction, despite significant geometric differences between the two complexes.

  7. Identification of complexes involving Tl(I) and Tl(III) with EDTA and DTPA ligands by ESI-MS.

    PubMed

    Zembrzuska, Joanna; Karbowska, Bozena

    2017-08-21

    Thallium is considered as an environmental threat, however its hazardous properties depend on its oxidation state. Tl(III) is approx. 1000-times more toxic compared to Tl(I), therefore identification of each species is essential in order to properly evaluate the associated health hazard. ESI-MS allows determination of speciation in solution due to its soft mode of ionization while selective complexation with ligands allows to distinguish the Tl species. Selective complexation of Tl(I) and Tl(III) ions requires the use of two selective complexing agents and selection of appropriate conditions for this process. Tl(I) and Tl(III) ions as well as two ligands (EDTA and DTPA) were used to form binary (single ion + single ligand), ternary (one ion + both ligands) and quaternary systems (both ions and both ligands) under different pH conditions (7 and 8). These mixtures were subjected to the determination of Tl species using ESI-MS operating in positive and negative ion mode. Tl(I) complexes with DTPA were identified at pH 7 and 8, whereas in case of EDTA the complexes were detected only at pH 8. In contrast, Tl(III) formed distinct complexes with EDTA at pH 7 and 8, while with DTPA the complexes were detected only at pH 8. Analysis of the quaternary system (which contained both ions and both ligands) revealed that Tl(I) formed complexes with EDTA, while Tl(III) formed complexes with DTPA at pH 7 and 8. The obtained results confirmed that the increase of the solution complexity allowed to simultaneously identify different complexes is solutions containing both Tl species. The initial analyzes carried out for binary and ternary solutions facilitated the simultaneous determination of specific complexes (Tl(I) with EDTA and Tl(III) with DTPA) in the quaternary system. This article is protected by copyright. All rights reserved.

  8. Uranyl Sequestration: Synthesis and Structural Characterization of Uranyl Complexes with a Tetradentate Methylterephthalamide Ligand

    SciTech Connect

    Ni, Chengbao; Shuh, David; Raymond, Kenneth

    2011-03-07

    Uranyl complexes of a bis(methylterephthalamide) ligand (LH{sub 4}) have been synthesized and characterized by X-ray crystallography. The structure is an unexpected [Me{sub 4}N]{sub 8}[L(UO{sub 2})]{sub 4} tetramer, formed via coordination of the two MeTAM units of L to two uranyl moieties. Addition of KOH to the tetramer gave the corresponding monomeric uranyl methoxide species [Me{sub 4}N]K{sub 2}[LUO{sub 2}(OMe)].

  9. Cleaved thioredoxin fusion protein enables the crystallization of poorly soluble ERα in complex with synthetic ligands

    PubMed Central

    Cura, Vincent; Gangloff, Monique; Eiler, Sylvia; Moras, Dino; Ruff, Marc

    2008-01-01

    The ligand-binding domain (LBD) of human oestrogen receptor α was produced in Escherichia coli as a cleavable thioredoxin (Trx) fusion in order to improve solubility. Crystallization trials with either cleaved and purified LBD or with the purified fusion protein both failed to produce crystals. In another attempt, Trx was not removed from the LBD after endoproteolytic cleavage and its presence promoted nucleation and subsequent crystal growth, which allowed the structure determination of two different LBD–ligand–coactivator peptide complexes at 2.3 Å resolution. This technique is likely to be applicable to other low-solubility proteins. PMID:18097104

  10. Nucleophilic ring opening of bridging thietane ligands in trirhenium carbonyl cluster complexes

    SciTech Connect

    Adams, R.D.; Cortopassi, J.E.; Falloon, S.B.

    1992-11-01

    The reactions of 3,3-dimethylthietane, SCH{sub 2}CMe{sub 2}CH{sub 2} (3,3-DMT), and thietane, SCH{sub 2}CH{sub 2}CH{sub 2}, with Re{sub 3}(CO){sub 10}[{mu}-SCH{sub 2}CH{sub 2}CH{sub 2}]({mu}-H){sub 3}, 2b. Compound 2a was characterized crystallographically and was found to consist of a trirhenium cluster with three bridging hydride ligands and a bridging thietane ligand coordinated through its sulfur atom. 2a and 2b react with halide ions by ring-opening additions to the 3,3-DMT ligand to yield the complex anions [Re{sub 3}(CO){sub 10}({mu}-SCH{sub 2}CMe{sub 2}CH{sub 2}x)({mu}-h){sub 3}]{sup -} 3A-6A, X = F (71%), Cl(71%), Br(84%), I(87%) and [Re{sub 3}(CO){sub 10}({mu}-SCH{sub 2}CH{sub 2}CH{sub 2}Cl)({mu}-H){sub 3}]{sup -}, 4b (67%). Similarly, addition of NMe{sub 3} to 2a and 2b yielded the ring-opened zwitterions Re{sub 3}(CO){sub 10}({mu}-SCH{sub 2}CMe{sub 2}CH{sub 2}NMe{sub 3})({mu}-H){sub 3}, 7 a crystographically. They are zwitterions positively charged at the nitrogen atoms and negatively charged on the trirhenium clusters. Complex 7b was also obtained in a 48% yield from the reaction of Re{sub 3}(C){sub 12}({mu}-H){sub 3} with Me{sub 3}NO in the presence of thietane, but the corresponding reaction using 3,3-DMT yielded only 2a and Re{sub 3}(CO){sub 11}(SCH{sub 2}CMe{sub 2}CH{sub 2})({mu}-H){sub 3}, 8. Attempts to obtain a ring-opening addition to 2a by reaction with PMe{sub 2}Ph yielded only Re{sub 3}(CO){sub 10}(PMe{sub 2}PH){sub 2}({mu}-H){sub 3} by ligand substitution. Attempts to obtain ring opening addition to 8 by reaction with I{sup -} yielded only [Re{sub 3}(CO){sub 11}I({mu}-H){sub 3}]{sup -} by ligand substitution. 20 refs., 3 figs., 10 tabs.

  11. Ligand-based reduction of CO(2) to CO mediated by an anionic niobium nitride complex.

    PubMed

    Silvia, Jared S; Cummins, Christopher C

    2010-02-24

    The terminal nitride anion complex [Na][N[triple bond]Nb(N[(t)Bu]Ar)(3)] ([Na][1], Ar = 3,5-Me(2)C(6)H(3)) reacts quantitatively with CO(2) to give the carbamate complex [Na][O(2)CN[triple bond]Nb(N[(t)Bu]Ar)(3)] ([Na][O(2)C-1]). The structure of [Na][O(2)C-1] as the bis-12-crown-4 solvate, as determined by X-ray crystallography, displays a unique N-bound carbamate ligand without any metal-oxygen interactions. When treated with organic acid anhydrides or acid chlorides, complex [Na][O(2)C-1] reacts via salt elimination to give the five-coordinate complexes (RC(O)O)(OCN)Nb(N[(t)Bu]Ar)(3) (R-2, R = Me, (t)Bu, F(3)C). We show that complexes R-2 yield the starting complex [Na][1] with concomitant release of CO upon two-electron reduction. This series of reactions constitutes a closed cycle for the conversion of CO(2) to CO mediated by a terminal nitride anion complex.

  12. Cytotoxic behavior and spectroscopic characterization of metal complexes of ethylacetoacetate bis(thiosemicarbazone) ligand

    NASA Astrophysics Data System (ADS)

    El-Tabl, Abdou Saad; El-wahed, Moshira Mohamed Abd; Rezk, Ahmed Mahmoud Salah Mahmoud

    2014-01-01

    Reaction of Cr(III), Mn(II), Co(II), Ni(II), Cu(II), Zn(II) and Cd(II) ion with 2,4-dihydrazino-thioamido-1-ethoxybutane led to the formation of mono and binuclear complexes. These complexes have been characterized by elemental analyses, IR, UV-Vis spectra, magnetic moments, molar conductances, 1H NMR and mass spectra (ligand and its Zn(II) complex), thermal analyses (DTA and TGA) and ESR measurements. The IR data suggest the involvement of sulfur and azomethane nitrogen atoms in coordination to the central metal ion .The Molar conductances of the complexes in DMF are commensurate with their non-ionic character. The ESR spectra of Cu(II) complexes show axial type symmetry (d(x2-y2)) ground state with covalent bond character. On the basis of spectral studies, octahedral or tetrahedral geometry has been assigned to the metal complexes. Complexes have been tested invitro against tumor cells and number of microorganisms in order to assess their antitumor and antimicrobial properties.

  13. Asymmetric cyclopropanation of olefins catalysed by Cu(I) complexes of chiral pyridine-containing macrocyclic ligands (Pc-L*).

    PubMed

    Castano, Brunilde; Guidone, Stefano; Gallo, Emma; Ragaini, Fabio; Casati, Nicola; Macchi, Piero; Sisti, Massimo; Caselli, Alessandro

    2013-02-21

    The synthesis and characterisation of copper(I) complexes of chiral pyridine-containing macrocyclic ligands (Pc-L*) and their use as catalysts in asymmetric cyclopropanation reactions are reported. All ligands and metal complexes were fully characterised, including crystal structures of some species determined by X-ray diffraction on single crystals. This allowed characterising the very different conformations of the macrocycles which could be induced by different substituents or by metal complexation. The strategy adopted for the ligand synthesis is very flexible allowing several structural modifications. A small library of macrocyclic ligands possessing the same donor properties but with either C(1) or C(2) symmetry was synthesized. Cyclopropane products with both aromatic and aliphatic olefins were obtained in good yields and enantiomeric excesses up to 99%.

  14. Novel bispidine ligands and their first-row transition metal complexes: trigonal bipyramidal and trigonal prismatic geometries.

    PubMed

    Comba, Peter; Haaf, Christina; Wadepohl, Hubert

    2009-07-20

    Four very rigid second generation bispidine-based ligands (bispidine = 3,7-diazabicyclo[3.3.1]nonane; tetra-, penta- and hexadentate; exclusively tertiary amine donors except for one of the pentadentate ligands, where one of the donors is a pyridyl group) and their Co(II), Ni(II), Cu(II), and Zn(II) complexes are reported. The experimentally determined X-ray crystal structures and computational data, based on empirical force field (MM) and approximate density functional theory (DFT) calculations, indicate that these new ligands, which are based on a modular system and therefore allow for a wide range of donor sets and coordination geometries, have rather large cavities (i.e., lead to a preference for +II over +III oxidation states and induce relatively low ligand fields), enforce trigonal geometries (pentacoordinate systems: preference for trigonal bipyramidal, hexacoordinate complexes: preference for trigonal prismatic), and lead, especially for Cu(II), to very high complex stabilities.

  15. Fluorophore ligand binding and complex stabilization of the RNA Mango and RNA Spinach aptamers.

    PubMed

    Jeng, Sunny C Y; Chan, Hedy H Y; Booy, Evan