Diatoms Si uptake capacity drives carbon export in coastal upwelling systems

NASA Astrophysics Data System (ADS)

Abrantes, Fatima; Cermeno, Pedro; Lopes, Cristina; Romero, Oscar; Matos, Lélia; Van Iperen, Jolanda; Rufino, Marta; Magalhães, Vitor

2016-07-01

Coastal upwelling systems account for approximately half of global ocean primary production and contribute disproportionately to biologically driven carbon sequestration. Diatoms, silica-precipitating microalgae, constitute the dominant phytoplankton in these productive regions, and their abundance and assemblage composition in the sedimentary record is considered one of the best proxies for primary production. The study of the sedimentary diatom abundance (SDA) and total organic carbon content (TOC) in the five most important coastal upwelling systems of the modern ocean (Iberia-Canary, Benguela, Peru-Humboldt, California, and Somalia-Oman) reveals a global-scale positive relationship between diatom production and organic carbon burial. The analysis of SDA in conjunction with environmental variables of coastal upwelling systems such as upwelling strength, satellite-derived net primary production, and surface water nutrient concentrations shows different relations between SDA and primary production on the regional scale. On the global scale, SDA appears modulated by the capacity of diatoms to take up silicic acid, which ultimately sets an upper limit to global export production in these ocean regions.

29 CFR 541.504 - Drivers who sell.

Code of Federal Regulations, 2010 CFR

2010-07-01

... products may qualify as exempt outside sales employees only if the employee has a primary duty of making sales. In determining the primary duty of drivers who sell, work performed incidental to and in... determining if a driver has a primary duty of making sales, including, but not limited to: a comparison of the...

29 CFR 541.504 - Drivers who sell.

Code of Federal Regulations, 2011 CFR

2011-07-01

... products may qualify as exempt outside sales employees only if the employee has a primary duty of making sales. In determining the primary duty of drivers who sell, work performed incidental to and in... determining if a driver has a primary duty of making sales, including, but not limited to: a comparison of the...

Short rotation forestry harvesting - systems and costs

Treesearch

Bruce R. Hartsough; Bryce J. Stokes

1997-01-01

Single stem short rotation plantations in the United States are largely dedicated to pulp production, with fuel as a secondary product. There are very limited plantings for fuel production, and others where the primary purpose is treatment of various wastewater's. All production harvesting of single stem plantations is conducted with conventional forestry...

Interannual Variation in Phytoplankton Class-Specific Primary Production at a Global Scale

NASA Technical Reports Server (NTRS)

Rousseaux, Cecile Severine; Gregg, Watson W.

2014-01-01

We used the NASA Ocean Biogeochemical Model (NOBM) combined with remote sensing data via assimilation to evaluate the contribution of 4 phytoplankton groups to the total primary production. First we assessed the contribution of each phytoplankton groups to the total primary production at a global scale for the period 1998-2011. Globally, diatoms were the group that contributed the most to the total phytoplankton production (50, the equivalent of 20 PgC y-1. Coccolithophores and chlorophytes each contributed to 20 (7 PgC y-1 of the total primary production and cyanobacteria represented about 10 (4 PgC y(sub-1) of the total primary production. Primary production by diatoms was highest in high latitude (45) and in major upwelling systems (Equatorial Pacific and Benguela system). We then assessed interannual variability of this group-specific primary production over the period 1998-2011. Globally the annual relative contribution of each phytoplankton groups to the total primary production varied by maximum 4 (1-2 PgC y-1. We assessed the effects of climate variability on the class-specific primary production using global (i.e. Multivariate El Nio Index, MEI) and regional climate indices (e.g. Southern Annular Mode (SAM), Pacific Decadal Oscillation (PDO) and North Atlantic Oscillation (NAO)). Most interannual variability occurred in the Equatorial Pacific and was associated with climate variability as indicated by significant correlation (p 0.05) between the MEI and the class-specific primary production from all groups except coccolithophores. In the Atlantic, climate variability as indicated by NAO was significantly correlated to the primary production of 2 out of the 4 groups in the North Central Atlantic (diatomscyanobacteria) and in the North Atlantic (chlorophytes and coccolithophores). We found that climate variability as indicated by SAM had only a limited effect on the class-specific primary production in the Southern Ocean. These results provide a modeling and data assimilation perspective to phytoplankton partitioning of primary production and contribute to our understanding of the dynamics of the carbon cycle in the oceans at a global scale.

Interannual Variation in Phytoplankton Primary Production at a Global Scale

NASA Technical Reports Server (NTRS)

Rousseaux, Cecile Severine; Gregg, Watson W.

2013-01-01

We used the NASA Ocean Biogeochemical Model (NOBM) combined with remote sensing data via assimilation to evaluate the contribution of four phytoplankton groups to the total primary production. First, we assessed the contribution of each phytoplankton groups to the total primary production at a global scale for the period 1998-2011. Globally, diatoms contributed the most to the total phytoplankton production ((is)approximately 50%, the equivalent of 20 PgC·y1). Coccolithophores and chlorophytes each contributed approximately 20% ((is) approximately 7 PgC·y1) of the total primary production and cyanobacteria represented about 10% ((is) approximately 4 PgC·y1) of the total primary production. Primary production by diatoms was highest in the high latitudes ((is) greater than 40 deg) and in major upwelling systems (Equatorial Pacific and Benguela system). We then assessed interannual variability of this group-specific primary production over the period 1998-2011. Globally the annual relative contribution of each phytoplankton groups to the total primary production varied by maximum 4% (1-2 PgC·y1). We assessed the effects of climate variability on group-specific primary production using global (i.e., Multivariate El Niño Index, MEI) and "regional" climate indices (e.g., Southern Annular Mode (SAM), Pacific Decadal Oscillation (PDO) and North Atlantic Oscillation (NAO)). Most interannual variability occurred in the Equatorial Pacific and was associated with climate variability as indicated by significant correlation (p (is) less than 0.05) between the MEI and the group-specific primary production from all groups except coccolithophores. In the Atlantic, climate variability as indicated by NAO was significantly correlated to the primary production of 2 out of the 4 groups in the North Central Atlantic (diatoms/cyanobacteria) and in the North Atlantic (chlorophytes and coccolithophores). We found that climate variability as indicated by SAM had only a limited effect on group-specific primary production in the Southern Ocean. These results provide a modeling and data assimilation perspective to phytoplankton partitioning of primary production and contribute to our understanding of the dynamics of the carbon cycle in the oceans at a global scale.

Elevated production of NH4NO3 from the photochemical processing of vehicle exhaust: Implications for air quality in the Seoul Metropolitan Region

NASA Astrophysics Data System (ADS)

Link, Michael F.; Kim, Jounghwa; Park, Gyutae; Lee, Taehyoung; Park, Taehyun; Babar, Zaeem Bin; Sung, Kijae; Kim, Pilho; Kang, Seokwon; Kim, Jeong Soo; Choi, Yongjoo; Son, Jihawn; Lim, Ho-Jin; Farmer, Delphine K.

2017-05-01

A vehicle fleet representative of passenger vehicles driven in the Seoul Metropolitan Region was investigated for primary emissions and secondary chemistry. Exhaust was photochemically oxidized in a flow reactor to determine the ammonium nitrate (NH4NO3) aerosol formation potential from vehicles of gasoline, diesel and liquid petroleum gasoline (LPG) fuel types. Secondary formation of aerosol NH4NO3, was larger than primary emissions for all vehicle fuel types except diesel, for which negligible secondary NH4NO3 production was observed. Although diesel vehicles emitted more primary nitrogen oxides than other vehicle types, ammonia emitted from gasoline and liquid petroleum gasoline fuels types limited the secondary production of NH4NO3. The results suggest that gasoline and liquid petroleum gasoline vehicles with three-way catalysts could be an important source of ammonia for NH4NO3 aerosol formation in ammonia-limited environments, including the Seoul Metropolitan Region.

Moving across Physical and Online Spaces: A Case Study in a Blended Primary Classroom

ERIC Educational Resources Information Center

Thibaut, Patricia; Curwood, Jen Scott; Carvalho, Lucila; Simpson, Alyson

2015-01-01

With the introduction of digital tools and online connectivity in primary schools, the shape of teaching and learning is shifting beyond the physical classroom. Drawing on the architecture of productive learning networks framework, we examine the affordances and limitations of an upper primary learning network and focus on how the digital and…

Pathways between primary production and fisheries yields of large marine ecosystems.

PubMed

Friedland, Kevin D; Stock, Charles; Drinkwater, Kenneth F; Link, Jason S; Leaf, Robert T; Shank, Burton V; Rose, Julie M; Pilskaln, Cynthia H; Fogarty, Michael J

2012-01-01

The shift in marine resource management from a compartmentalized approach of dealing with resources on a species basis to an approach based on management of spatially defined ecosystems requires an accurate accounting of energy flow. The flow of energy from primary production through the food web will ultimately limit upper trophic-level fishery yields. In this work, we examine the relationship between yield and several metrics including net primary production, chlorophyll concentration, particle-export ratio, and the ratio of secondary to primary production. We also evaluate the relationship between yield and two additional rate measures that describe the export of energy from the pelagic food web, particle export flux and mesozooplankton productivity. We found primary production is a poor predictor of global fishery yields for a sample of 52 large marine ecosystems. However, chlorophyll concentration, particle-export ratio, and the ratio of secondary to primary production were positively associated with yields. The latter two measures provide greater mechanistic insight into factors controlling fishery production than chlorophyll concentration alone. Particle export flux and mesozooplankton productivity were also significantly related to yield on a global basis. Collectively, our analyses suggest that factors related to the export of energy from pelagic food webs are critical to defining patterns of fishery yields. Such trophic patterns are associated with temperature and latitude and hence greater yields are associated with colder, high latitude ecosystems.

Pathways between Primary Production and Fisheries Yields of Large Marine Ecosystems

PubMed Central

Friedland, Kevin D.; Stock, Charles; Drinkwater, Kenneth F.; Link, Jason S.; Leaf, Robert T.; Shank, Burton V.; Rose, Julie M.; Pilskaln, Cynthia H.; Fogarty, Michael J.

2012-01-01

The shift in marine resource management from a compartmentalized approach of dealing with resources on a species basis to an approach based on management of spatially defined ecosystems requires an accurate accounting of energy flow. The flow of energy from primary production through the food web will ultimately limit upper trophic-level fishery yields. In this work, we examine the relationship between yield and several metrics including net primary production, chlorophyll concentration, particle-export ratio, and the ratio of secondary to primary production. We also evaluate the relationship between yield and two additional rate measures that describe the export of energy from the pelagic food web, particle export flux and mesozooplankton productivity. We found primary production is a poor predictor of global fishery yields for a sample of 52 large marine ecosystems. However, chlorophyll concentration, particle-export ratio, and the ratio of secondary to primary production were positively associated with yields. The latter two measures provide greater mechanistic insight into factors controlling fishery production than chlorophyll concentration alone. Particle export flux and mesozooplankton productivity were also significantly related to yield on a global basis. Collectively, our analyses suggest that factors related to the export of energy from pelagic food webs are critical to defining patterns of fishery yields. Such trophic patterns are associated with temperature and latitude and hence greater yields are associated with colder, high latitude ecosystems. PMID:22276100

Consumer trophic diversity as a fundamental mechanism linking predation and ecosystem functioning.

PubMed

Hines, Jes; Gessner, Mark O

2012-11-01

1. Primary production and decomposition, two fundamental processes determining the functioning of ecosystems, may be sensitive to changes in biodiversity and food web interactions. 2. The impacts of food web interactions on ecosystem functioning are generally quantified by experimentally decoupling these linked processes and examining either primary production-based (green) or decomposition-based (brown) food webs in isolation. This decoupling may strongly limit our ability to assess the importance of food web interactions on ecosystem processes. 3. To evaluate how consumer trophic diversity mediates predator effects on ecosystem functioning, we conducted a mesocosm experiment and a field study using an assemblage of invertebrates that naturally co-occur on North Atlantic coastal saltmarshes. We measured the indirect impact of predation on primary production and leaf decomposition as a result of prey communities composed of herbivores alone, detritivores alone or both prey in combination. 4. We find that primary consumers can influence ecosystem process rates not only within, but also across green and brown sub-webs. Moreover, by feeding on a functionally diverse consumer assemblage comprised of both herbivores and detritivores, generalist predators can diffuse consumer effects on decomposition, primary production and feedbacks between the two processes. 5. These results indicate that maintaining functional diversity among primary consumers can alter the consequences of traditional trophic cascades, and they emphasize the role of the detritus-based sub-web when seeking key biotic drivers of plant production. Clearly, traditional compartmentalization of empirical food webs can limit our ability to predict the influence of food web interactions on ecosystem functioning. © 2012 The Authors. Journal of Animal Ecology © 2012 British Ecological Society.

Grassland productivity limited by multiple nutrients.

PubMed

Fay, Philip A; Prober, Suzanne M; Harpole, W Stanley; Knops, Johannes M H; Bakker, Jonathan D; Borer, Elizabeth T; Lind, Eric M; MacDougall, Andrew S; Seabloom, Eric W; Wragg, Peter D; Adler, Peter B; Blumenthal, Dana M; Buckley, Yvonne M; Chu, Chengjin; Cleland, Elsa E; Collins, Scott L; Davies, Kendi F; Du, Guozhen; Feng, Xiaohui; Firn, Jennifer; Gruner, Daniel S; Hagenah, Nicole; Hautier, Yann; Heckman, Robert W; Jin, Virginia L; Kirkman, Kevin P; Klein, Julia; Ladwig, Laura M; Li, Qi; McCulley, Rebecca L; Melbourne, Brett A; Mitchell, Charles E; Moore, Joslin L; Morgan, John W; Risch, Anita C; Schütz, Martin; Stevens, Carly J; Wedin, David A; Yang, Louie H

2015-07-06

Terrestrial ecosystem productivity is widely accepted to be nutrient limited(1). Although nitrogen (N) is deemed a key determinant of aboveground net primary production (ANPP)(2,3), the prevalence of co-limitation by N and phosphorus (P) is increasingly recognized(4-8). However, the extent to which terrestrial productivity is co-limited by nutrients other than N and P has remained unclear. Here, we report results from a standardized factorial nutrient addition experiment, in which we added N, P and potassium (K) combined with a selection of micronutrients (K+μ), alone or in concert, to 42 grassland sites spanning five continents, and monitored ANPP. Nutrient availability limited productivity at 31 of the 42 grassland sites. And pairwise combinations of N, P, and K+μ co-limited ANPP at 29 of the sites. Nitrogen limitation peaked in cool, high latitude sites. Our findings highlight the importance of less studied nutrients, such as K and micronutrients, for grassland productivity, and point to significant variations in the type and degree of nutrient limitation. We suggest that multiple-nutrient constraints must be considered when assessing the ecosystem-scale consequences of nutrient enrichment.

Molybdenum limitation of microbial nitrogen assimilation in aquatic ecosystems and pure cultures.

PubMed

Glass, Jennifer B; Axler, Richard P; Chandra, Sudeep; Goldman, Charles R

2012-01-01

Molybdenum (Mo) is an essential micronutrient for biological assimilation of nitrogen gas and nitrate because it is present in the cofactors of nitrogenase and nitrate reductase enzymes. Although Mo is the most abundant transition metal in seawater (107 nM), it is present in low concentrations in most freshwaters, typically <20 nM. In 1960, it was discovered that primary productivity was limited by Mo scarcity (2-4 nM) in Castle Lake, a small, meso-oligotrophic lake in northern California. Follow up studies demonstrated that Mo also limited primary productivity in lakes in New Zealand, Alaska, and the Sierra Nevada. Research in the 1970s and 1980s showed that Mo limited primary productivity and nitrate uptake in Castle Lake only during periods of the growing season when nitrate concentrations were relatively high because ammonium assimilation does not require Mo. In the years since, research has shifted to investigate whether Mo limitation also occurs in marine and soil environments. Here we review studies of Mo limitation of nitrogen assimilation in natural microbial communities and pure cultures. We also summarize new data showing that the simultaneous addition of Mo and nitrate causes increased activity of proteins involved in nitrogen assimilation in the hypolimnion of Castle Lake when ammonium is scarce. Furthermore, we suggest that meter-scale Mo and oxygen depth profiles from Castle Lake are consistent with the hypothesis that nitrogen-fixing cyanobacteria in freshwater periphyton communities have higher Mo requirements than other microbial communities. Finally, we present topics for future research related to Mo bioavailability through time and with changing oxidation state.

Molybdenum limitation of microbial nitrogen assimilation in aquatic ecosystems and pure cultures

PubMed Central

Glass, Jennifer B.; Axler, Richard P.; Chandra, Sudeep; Goldman, Charles R.

2012-01-01

Molybdenum (Mo) is an essential micronutrient for biological assimilation of nitrogen gas and nitrate because it is present in the cofactors of nitrogenase and nitrate reductase enzymes. Although Mo is the most abundant transition metal in seawater (107 nM), it is present in low concentrations in most freshwaters, typically <20 nM. In 1960, it was discovered that primary productivity was limited by Mo scarcity (2–4 nM) in Castle Lake, a small, meso-oligotrophic lake in northern California. Follow up studies demonstrated that Mo also limited primary productivity in lakes in New Zealand, Alaska, and the Sierra Nevada. Research in the 1970s and 1980s showed that Mo limited primary productivity and nitrate uptake in Castle Lake only during periods of the growing season when nitrate concentrations were relatively high because ammonium assimilation does not require Mo. In the years since, research has shifted to investigate whether Mo limitation also occurs in marine and soil environments. Here we review studies of Mo limitation of nitrogen assimilation in natural microbial communities and pure cultures. We also summarize new data showing that the simultaneous addition of Mo and nitrate causes increased activity of proteins involved in nitrogen assimilation in the hypolimnion of Castle Lake when ammonium is scarce. Furthermore, we suggest that meter-scale Mo and oxygen depth profiles from Castle Lake are consistent with the hypothesis that nitrogen-fixing cyanobacteria in freshwater periphyton communities have higher Mo requirements than other microbial communities. Finally, we present topics for future research related to Mo bioavailability through time and with changing oxidation state. PMID:22993512

A modeling approach to soil type and precipitation seasonality interactions on bioenergy crop production

USDA-ARS?s Scientific Manuscript database

Precipitation limits primary production by affecting soil moisture, and soil type interacts with soil moisture to determine soil water availability to plants. We used ALMANAC, a process-based model, to simulate switchgrass (Panicum virgatum var. Alamo) biomass production in Central Texas under thre...

Influence of allochthonous dissolved organic matter on pelagic basal production in a northerly estuary

NASA Astrophysics Data System (ADS)

Andersson, A.; Brugel, S.; Paczkowska, J.; Rowe, O. F.; Figueroa, D.; Kratzer, S.; Legrand, C.

2018-05-01

Phytoplankton and heterotrophic bacteria are key groups at the base of aquatic food webs. In estuaries receiving riverine water with a high content of coloured allochthonous dissolved organic matter (ADOM), phytoplankton primary production may be reduced, while bacterial production is favoured. We tested this hypothesis by performing a field study in a northerly estuary receiving nutrient-poor, ADOM-rich riverine water, and analyzing results using multivariate statistics. Throughout the productive season, and especially during the spring river flush, the production and growth rate of heterotrophic bacteria were stimulated by the riverine inflow of dissolved organic carbon (DOC). In contrast, primary production and photosynthetic efficiency (i.e. phytoplankton growth rate) were negatively affected by DOC. Primary production related positively to phosphorus, which is the limiting nutrient in the area. In the upper estuary where DOC concentrations were the highest, the heterotrophic bacterial production constituted almost 100% of the basal production (sum of primary and bacterial production) during spring, while during summer the primary and bacterial production were approximately equal. Our study shows that riverine DOC had a strong negative influence on coastal phytoplankton production, likely due to light attenuation. On the other hand DOC showed a positive influence on bacterial production since it represents a supplementary food source. Thus, in boreal regions where climate change will cause increased river inflow to coastal waters, the balance between phytoplankton and bacterial production is likely to be changed, favouring bacteria. The pelagic food web structure and overall productivity will in turn be altered.

40 CFR 421.52 - Effluent limitations guidelines representing the degree of effluent reduction attainable by the...

Code of Federal Regulations, 2011 CFR

2011-07-01

... CATEGORY Primary Electrolytic Copper Refining Subcategory § 421.52 Effluent limitations guidelines...,000 lb of product) Total suspended solids 0.100 0.050 Copper 0.0017 0.0008 Cadmium 0.00006 0.00003...

40 CFR 421.52 - Effluent limitations guidelines representing the degree of effluent reduction attainable by the...

Code of Federal Regulations, 2010 CFR

2010-07-01

... CATEGORY Primary Electrolytic Copper Refining Subcategory § 421.52 Effluent limitations guidelines...,000 lb of product) Total suspended solids 0.100 0.050 Copper 0.0017 0.0008 Cadmium 0.00006 0.00003...

Benthic algal production across lake size gradients: interactions among morphometry, nutrients, and light.

PubMed

Vadeboncoeur, Yvonne; Peterson, Garry; Vander Zanden, M Jake; Kalff, Jacob

2008-09-01

Attached algae play a minor role in conceptual and empirical models of lake ecosystem function but paradoxically form the energetic base of food webs that support a wide variety of fishes. To explore the apparent mismatch between perceived limits on contributions of periphyton to whole-lake primary production and its importance to consumers, we modeled the contribution of periphyton to whole-ecosystem primary production across lake size, shape, and nutrient gradients. The distribution of available benthic habitat for periphyton is influenced by the ratio of mean depth to maximum depth (DR = z/ z(max)). We modeled total phytoplankton production from water-column nutrient availability, z, and light. Periphyton production was a function of light-saturated photosynthesis (BPmax) and light availability at depth. The model demonstrated that depth ratio (DR) and light attenuation strongly determined the maximum possible contribution of benthic algae to lake production, and the benthic proportion of whole-lake primary production (BPf) declined with increasing nutrients. Shallow lakes (z < or =5 m) were insensitive to DR and were dominated by either benthic or pelagic primary productivity depending on trophic status. Moderately deep oligotrophic lakes had substantial contributions by benthic primary productivity at low depth ratios and when maximum benthic photosynthesis was moderate or high. Extremely large, deep lakes always had low fractional contributions of benthic primary production. An analysis of the world's largest lakes showed that the shapes of natural lakes shift increasingly toward lower depth ratios with increasing depth, maximizing the potential importance of littoral primary production in large-lake food webs. The repeatedly demonstrated importance of periphyton to lake food webs may reflect the combination of low depth ratios and high light penetration characteristic of large, oligotrophic lakes that in turn lead to substantial contributions of periphyton to autochthonous production.

The Use of Multi-Source Satellite and Geospatial Data to Study the Effect of Urbanization of Primary Productivity in the United States

NASA Technical Reports Server (NTRS)

Imhoff, M. L.; Tucker, C. J.; Lawrence, W. T.; Stutzer, D.; Rusin, Robert

2000-01-01

Data from two different satellites, a digital land cover map, and digital census data were analyzed and combined in a geographic information system to study the effect of urbanization on photosynthetic vegetation productivity in the United States. Results show that urbanization can have a measurable but variable impact on the primary productivity of the land surface. Annual productivity can be reduced by as much as 20 days in some areas, but in resource limited regions, photosynthetic production can be enhanced by human activity. Overall, urban development reduces the productivity of the land surface and those areas with the highest productivity are directly in the path of urban sprawl.

Watching grass grow: Successes and limitations of image-based methods for monitoring grassland phenology

USDA-ARS?s Scientific Manuscript database

Seasonal changes in aboveground primary production (i.e. phenology) are influenced by environmental conditions with implications for land-atmosphere interactions, carbon cycling, and agricultural production. Monitoring phenology and quantifying seasonal patterns across spatially extensive grasslands...

Consumers control diversity and functioning of a natural marine ecosystem.

PubMed

Altieri, Andrew H; Trussell, Geoffrey C; Ewanchuk, Patrick J; Bernatchez, Genevieve; Bracken, Matthew E S

2009-01-01

Our understanding of the functional consequences of changes in biodiversity has been hampered by several limitations of previous work, including limited attention to trophic interactions, a focus on species richness rather than evenness, and the use of artificially assembled communities. In this study, we manipulated the density of an herbivorous snail in natural tide pools and allowed seaweed communities to assemble in an ecologically relevant and non-random manner. Seaweed species evenness and biomass-specific primary productivity (mg O(2) h(-1) g(-1)) were higher in tide pools with snails because snails preferentially consumed an otherwise dominant seaweed species that can reduce biomass-specific productivity rates of algal assemblages. Although snails reduced overall seaweed biomass in tide pools, they did not affect gross primary productivity at the scale of tide pools (mg O(2) h(-1) pool(-1) or mg O(2) h(-1) m(-2)) because of the enhanced biomass-specific productivity associated with grazer-mediated increases in algal evenness. Our results suggest that increased attention to trophic interactions, diversity measures other than richness, and particularly the effects of consumers on evenness and primary productivity, will improve our understanding of the relationship between diversity and ecosystem functioning and allow more effective links between experimental results and real-world changes in biodiversity.

Consumers Control Diversity and Functioning of a Natural Marine Ecosystem

PubMed Central

Altieri, Andrew H.; Trussell, Geoffrey C.; Ewanchuk, Patrick J.; Bernatchez, Genevieve; Bracken, Matthew E. S.

2009-01-01

Background Our understanding of the functional consequences of changes in biodiversity has been hampered by several limitations of previous work, including limited attention to trophic interactions, a focus on species richness rather than evenness, and the use of artificially assembled communities. Methodology and Principal Findings In this study, we manipulated the density of an herbivorous snail in natural tide pools and allowed seaweed communities to assemble in an ecologically relevant and non-random manner. Seaweed species evenness and biomass-specific primary productivity (mg O2 h−1 g−1) were higher in tide pools with snails because snails preferentially consumed an otherwise dominant seaweed species that can reduce biomass-specific productivity rates of algal assemblages. Although snails reduced overall seaweed biomass in tide pools, they did not affect gross primary productivity at the scale of tide pools (mg O2 h−1 pool−1 or mg O2 h−1 m−2) because of the enhanced biomass-specific productivity associated with grazer-mediated increases in algal evenness. Significance Our results suggest that increased attention to trophic interactions, diversity measures other than richness, and particularly the effects of consumers on evenness and primary productivity, will improve our understanding of the relationship between diversity and ecosystem functioning and allow more effective links between experimental results and real-world changes in biodiversity. PMID:19384410

Acclimation of Emiliania huxleyi (1516) to nutrient limitation involves precise modification of the proteome to scavenge alternative sources of N and P.

PubMed

McKew, Boyd A; Metodieva, Gergana; Raines, Christine A; Metodiev, Metodi V; Geider, Richard J

2015-10-01

Limitation of marine primary production by the availability of nitrogen or phosphorus is common. Emiliania huxleyi, a ubiquitous phytoplankter that plays key roles in primary production, calcium carbonate precipitation and production of dimethyl sulfide, often blooms in mid-latitude at the beginning of summer when inorganic nutrient concentrations are low. To understand physiological mechanisms that allow such blooms, we examined how the proteome of E. huxleyi (strain 1516) responds to N and P limitation. We observed modest changes in much of the proteome despite large physiological changes (e.g. cellular biomass, C, N and P) associated with nutrient limitation of growth rate. Acclimation to nutrient limitation did however involve significant increases in the abundance of transporters for ammonium and nitrate under N limitation and for phosphate under P limitation. More notable were large increases in proteins involved in the acquisition of organic forms of N and P, including urea and amino acid/polyamine transporters and numerous C-N hydrolases under N limitation and a large upregulation of alkaline phosphatase under P limitation. This highly targeted reorganization of the proteome towards scavenging organic forms of macronutrients gives unique insight into the molecular mechanisms that underpin how E. huxleyi has found its niche to bloom in surface waters depleted of inorganic nutrients. © 2015 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.

Production and carbon allocation in a clonal Eucalyptus plantation with water and nutrient manipulations

Treesearch

Jose Luiz Stape; Dan Binkley; Michael G. Ryan

2008-01-01

We examined resource limitations on growth and carbon allocation in a fast-growing, clonal plantation of Eucalyptus grandis urophylla in Brazil by characterizing responses to annual rainfall, and response to irrigation and fertililization for 2 years. Productivity measures included gross primary production (GPP), total belowground carbon allocation (...

Net primary productivity of subalpine meadows in Yosemite National Park in relation to climate variability

USGS Publications Warehouse

Moore, Peggy E.; Van Wagtendonk, Jan W.; Yee, Julie L.; McClaran, Mitchel P.; Cole, David N.; McDougald, Neil K.; Brooks, Matthew L.

2013-01-01

Subalpine meadows are some of the most ecologically important components of mountain landscapes, and primary productivity is important to the maintenance of meadow functions. Understanding how changes in primary productivity are associated with variability in moisture and temperature will become increasingly important with current and anticipated changes in climate. Our objective was to describe patterns and variability in aboveground live vascular plant biomass in relation to climatic factors. We harvested aboveground biomass at peak growth from four 64-m2 plots each in xeric, mesic, and hydric meadows annually from 1994 to 2000. Data from nearby weather stations provided independent variables of spring snow water content, snow-free date, and thawing degree days for a cumulative index of available energy. We assembled these climatic variables into a set of mixed effects analysis of covariance models to evaluate their relationships with annual aboveground net primary productivity (ANPP), and we used an information theoretic approach to compare the quality of fit among candidate models. ANPP in the xeric meadow was negatively related to snow water content and thawing degree days and in the mesic meadow was negatively related to snow water content. Relationships between ANPP and these 2 covariates in the hydric meadow were not significant. Increasing snow water content may limit ANPP in these meadows if anaerobic conditions delay microbial activity and nutrient availability. Increased thawing degree days may limit ANPP in xeric meadows by prematurely depleting soil moisture. Large within-year variation of ANPP in the hydric meadow limited sensitivity to the climatic variables. These relationships suggest that, under projected warmer and drier conditions, ANPP will increase in mesic meadows but remain unchanged in xeric meadows because declines associated with increased temperatures would offset the increases from decreased snow water content.

Growth performance of fast growing broilers reared under different types of production systems with outdoor access: Implications for organic and alternative production systems

USDA-ARS?s Scientific Manuscript database

Outdoor access is an important part of organic and free range poultry production, yet there is limited information on the impact of various housing and production systems on growth performance and colonization of foodborne pathogens. Therefore, the primary purpose of this study was to evaluate the ...

Changing nutrient stoichiometry affects phytoplankton production, DOP build up and dinitrogen fixation - a mesocosm experiment in the eastern tropical North Atlantic

NASA Astrophysics Data System (ADS)

Meyer, J.; Löscher, C. R.; Neulinger, S. C.; Reichel, A. F.; Loginova, A.; Borchard, C.; Schmitz, R. A.; Hauss, H.; Kiko, R.; Riebesell, U.

2015-07-01

Ocean deoxygenation due to climate change may alter redox-sensitive nutrient cycles in the marine environment. The productive eastern tropical North Atlantic (ETNA) upwelling region may be particularly affected when the relatively moderate oxygen minimum zone (OMZ) deoxygenates further and microbially-driven nitrogen (N) loss processes are promoted. Consequently, water masses with a low N : P ratio could reach the euphotic layer, possibly influencing primary production in those waters. Previous mesocosm studies in the oligotrophic Atlantic Ocean identified N availability as controlling of primary production, while a possible co-limitation of nitrate and phosphate (P) could not be ruled out. To better understand the impact of changing N : P ratios on primary production and on N2 fixation in the ETNA surface ocean, we conducted land-based mesocosm experiments with natural plankton communities and applied a broad range of N : P ratios (2.67-48). Silicate was supplied at 15 μmol L-1 in all mesocosms. We monitored nutrient drawdown, bloom formation, biomass build up and diazotrophic feedback in response to variable nutrient stoichiometry. Our results confirmed N to be limiting to primary production. We found that excess P was channeled through particulate organic matter (POP) into the dissolved organic matter (DOP) pool. In mesocosms with low P availability, DOP was utilized while N2 fixation increased, suggesting a link between those two processes. Interestingly this observation was most pronounced in mesocosms where inorganic N was still available, indicating that bioavailable N does not necessarily has to have a negative impact on N2 fixation. We observed a shift from a mixed cyanobacterial/proteobacterial dominated active diazotrophic community towards diazotrophic diatom symbionts of the Richelia-Rhizosolenia symbiosis. We hypothesize that a potential change in nutrient stoichiometry in the ETNA might lead to a general shift within the diazotrophic community, potentially modifying primary productivity.

Regimes of Pulsar Pair Formation and Particle Energetics

NASA Technical Reports Server (NTRS)

Harding, Alice K.; Muslimov, Alexander G.; Zhang, Bing; White, Nicholas E. (Technical Monitor)

2002-01-01

We investigate the conditions required for the production of electron-positron pairs above a pulsar polar cap (PC) and the influence of pair production on the energetics of the primary particle acceleration. Assuming space-charge limited flow acceleration including the inertial frame-dragging effect, we allow both one-photon and two-photon pair production by either curvature radiation (CR) photons or photons resulting from inverse-Compton scattering of thermal photons from the PC by primary electrons. We find that,, while only the younger pulsars can produce pairs through CR, nearly all known radio pulsars are capable of producing pairs through non-resonant inverse-Compton scatterings. The effect of the neutron star equations of state on the pair death lines is explored. We show that pair production is facilitated in more compact stars and more a massive stars. Therefore accretion of mass by pulsars in binary systems may allow pair production in most of the millisecond purser population. We also find that two-photon pair production may be important in millisecond pursers if their surface temperatures are above approx. or equal to three million degrees K. Pursers that produce pairs through CRT wilt have their primary acceleration limited by the effect of screening of the electric field. In this regime, the high-energy luminosity should follow a L(sub HE) proportional to dot-E(sup 1/2, sub rot) dependence. The acceleration voltage drop in pursers that produce pairs only through inverse-Compton emission will not be limited by electric field screening. In this regime, the high-energy luminosity should follow a L(sub HE) proportional to dot-E(sub rot) dependence. Thus, older pursers will have significantly lower gamma-ray luminosity.

Potential new production in two upwelling regions of the western Arabian Sea: Estimation and comparison

NASA Astrophysics Data System (ADS)

Liao, Xiaomei; Zhan, Haigang; Du, Yan

2016-07-01

Using satellite-derived and in situ data, the wind-driven potential new production (nitrate supply) for the 300 km wide coastal band in two upwelling regions of the western Arabian Sea (AS) during the southwest monsoon is estimated. The upward nitrate flux to the euphotic zone is generally based on the physical processes of coastal transport (Ekman transport and geostrophic transport) and offshore Ekman pumping. The coastal geostrophic current in the western AS influences the upwelling intensity and latitudinal distributions of nitrate supply. The Oman and Somalia upwelling regions have similar level of potential new production (nitrate supply) during the summer monsoon, while the satellite estimates of primary production off Oman are 2 times greater than those off Somalia. The much higher potential f-ratio in the Somalia upwelling region indicates that the primary production could be limited by availability of other macronutrients (e.g., silicate). The correlation analysis of the primary production and the aerosol optical thickness shows that the Oman upwelling region displays a stronger coupling between the atmospheric deposition and the phytoplankton abundance. The high summertime dust levels in the atmosphere are suggested to contribute to the high primary production in the Oman upwelling region.

Sequential Formation and Accumulation of Primary and Secondary Shunt Metabolic Products in Claviceps purpurea1

PubMed Central

Taber, W. A.

1964-01-01

The fungus Claviceps purpurea was grown on a rich and a limited nutrient medium such that alkaloid was produced after 8 days on the former medium and after 3 days on the latter medium. Cultures grown on both were assayed for the primary shunt metabolic products, polyols, trehalose, lipids, ribonucleic acid, and polyphosphate, and the secondary metabolic product, ergot alkaloid. Although differing considerably in composition, the two media nevertheless allowed formation of both primary and secondary shunt products. In both instances, however, the secondary product, ergot alkaloid, did not form until formation and accumulation of the primary products had ceased and the mycelial content of these products was actually decreasing. In both instances, alkaloid formation took place after the total dry weight of the mycelium had begun to decrease but while the dry weight of the residual, or structural portion of the mycelium, was either constant or increasing. The dilution of labeling in mannitol isolated from mycelia grown on rich medium containing 1,6-C14-labeled mannitol was 2.2. Thus, about half of the mycelial mannitol was actually mannitol which had been taken up directly from the medium. PMID:14199021

Seasonal Variation of Phytoplankton and Primary Production in the Thames River, Southeastern Connecticut

NASA Astrophysics Data System (ADS)

Wainright, S. C.

2016-02-01

A year-long study was performed to investigate seasonal changes in the phytoplankton biomass and primary production in the Thames River, a salt wedge estuary that empties into Long Island Sound in southeastern CT. Chlorophyll measurements were made on discrete filtered samples collected above and below the 1-3 m deep pycnocline at a 5-meter deep station. Surface chlorophyll concentrations, primarily from diatoms, averaged approx. 2 mg m-3, with maxima (up to 10 mg m-3) during summer months (Jun to Aug) and minima during October through March (as low as 0.3 mg m-3). The lower water layer had nearly the same annual average but a smaller range (0.7-3.3 mg m-3) and a winter/spring bloom (Jan-Apr) that was not seen in surface water. During most of the winter, chlorophyll concentrations were higher in the lower layer. Primary production, as measured by 13C uptake in bottle incubations, averaged 67 mgC m-3 h-1 in surface water [range 0.1 (Jan 2012) to 800 mgC m-3 h-1 (Aug 2011)], and 3 mgC m-3 h-1 [range 0.04 (Jan 2012) to 17 mgC m-3 h-1 (Aug 2011)] in the lower layer. On most occasions, deep water incubated near the surface had a higher primary production rate than surface water incubated at the surface; apparently the light-limited phytoplankton in the lower layer were released from light-limitation during these incubations. During the study period there were over a dozen heavy wind or heavy rain events, including Hurricane Irene in August and a freak Nor'easter snow storm in October 2011. Hurricane Irene was associated with a large decline in phytoplankton biomass and primary production. With significant storms as frequent as the rate of sampling, it is difficult to separate a "storm effect" from a background seasonal pattern. The study reveals that phytoplankton, especially those in the lower layer, are light-limited in the Thames River estuary, and that the effects of significant storm events are superimposed on significant seasonal variation.

Canopy leaf area constrains [CO2]-induced enhancement of productivity and partitioning among aboveground carbon pools.

Treesearch

Heather R. McCarthy; Ram Oren; Adrien C. Finzi; Kurt H. Johnsen

2006-01-01

Net primary productivity (NPP) is enhanced under future atmospheric [CO2] in temperate forests representing a broad range of productivity. Yet questions remain in regard to how elevated [CO2]-induced NPP enhancement may be affected by climatic variations and limiting nutrient resources, as well as how this additional...

Molecular breeding of cereals for aluminium resistance

USDA-ARS?s Scientific Manuscript database

Aluminium (Al3+) toxicity is the primary factor limiting crop production on acidic soils worldwide. In addition to an application of lime for soil amelioration, Al3+ resistant plant varieties have been deployed to raise productivity on such hostile soils. This has been possible due to the exploita...

Spatial and temporal variability of chlorophyll and primary productivity in surface waters of southern Chile (41.5 43° S)

NASA Astrophysics Data System (ADS)

Iriarte, J. L.; González, H. E.; Liu, K. K.; Rivas, C.; Valenzuela, C.

2007-09-01

The southern fjord region of Chile is a unique ecosystem characterized by complex marine-terrestrial-atmospheric interactions that result in high biological production. Since organic nitrogen from terrestrial and atmospheric compartments is highly significant in this region (>40%), as is the low NO 3:PO 4 ratio in surface waters, it is suggested that fertilization from inorganic and organic nitrogen sources has a strong influence on both phytoplankton biomass/primary production and harmful algae bloom dynamics. The data presented in this paper provide an opportunity to improve our knowledge of phytoplankton dynamics on temporal and spatial mesoscales. Ocean color data from NASA (SeaWiFS) for chlorophyll and primary production estimates and in situ surface measurement of inorganic nutrients, phytoplankton biomass, and primary productivity revealed that the coastal waters of southern Chile have a classical spring and autumn chlorophyll bloom cycle in which primary production is co-limited by strong seasonal changes in light and nitrate. During spring blooms, autotrophic biomass (such as chlorophyll a, Chl- a) and primary production estimates reached 25 mg Chl- a m -3 and 23 mg C m -3 h -1, respectively, and micro-phytoplankton accounted for a significant portion of the biomass (60%) in spring. The contribution of phytoplankton size classes to total chlorophyll a revealed the dominance of nanoplankton (>50%) in winter and post-bloom periods (<1.0 mg Chl- a m -3).

Evaluation of Primary Production in the Lower Amazon River Based on a Dissolved Oxygen Stable Isotopic Mass Balance

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gagne-Maynard, William C.; Ward, Nicholas D.; Keil, Richard G.

The Amazon River outgasses nearly an equivalent amount of CO 2 as the rainforest sequesters on an annual basis due to microbial decomposition of terrigenous and aquatic organic matter. Most research performed in the Amazon has been focused on unraveling the mechanisms driving CO 2 production since the recognition of a persistent state of CO 2 supersaturation. However, although the river system is clearly net heterotrophic, the interplay between primary production and respiration is an essential aspect to understanding the overall metabolism of the ecosystem and potential transfer of energy up trophic levels. For example, an efficient ecosystem is capablemore » of both decomposing high amounts of organic matter at lower trophic levels, driving CO 2 emissions, and accumulating energy/biomass in higher trophic levels, stimulating fisheries production. Early studies found minimal evidence for primary production in the Amazon River mainstem and it has since been assumed that photosynthesis is strongly limited by low light penetration attributed to the high sediment load. Here, we test this assumption by measuring the stable isotopic composition of O 2 (δ 18O-O 2) and O 2 saturation levels in the lower Amazon River from Óbidos to the river mouth and its major tributaries, the Xingu and Tapajós rivers, during high and low water periods. An oxygen mass balance model was developed to estimate the input of photosynthetic oxygen in the discrete reach from Óbidos to Almeirim, midway to the river mouth. Based on the oxygen mass balance we estimate that primary production occurred at a rate of 0.39 ± 0.24 g O m 3 d -1 at high water and 1.02 ± 0.55 g O m 3 d -1 at low water. This translates to 41 ± 24% of the rate of O 2 drawdown via respiration during high water and 67 ± 33% during low water. These primary production rates are 2-7 times higher than past estimates for the Amazon River mainstem. In conclusion, it is possible that at high water much of this productivity signal is the result of legacy advection from floodplains, whereas limited floodplain connectivity during low water implies that most of this signal is the result of in situ primary production in the Amazon River mainstem.« less

Quantifying soil moisture impacts on light use efficiency across biomes.

PubMed

Stocker, Benjamin D; Zscheischler, Jakob; Keenan, Trevor F; Prentice, I Colin; Peñuelas, Josep; Seneviratne, Sonia I

2018-06-01

Terrestrial primary productivity and carbon cycle impacts of droughts are commonly quantified using vapour pressure deficit (VPD) data and remotely sensed greenness, without accounting for soil moisture. However, soil moisture limitation is known to strongly affect plant physiology. Here, we investigate light use efficiency, the ratio of gross primary productivity (GPP) to absorbed light. We derive its fractional reduction due to soil moisture (fLUE), separated from VPD and greenness changes, using artificial neural networks trained on eddy covariance data, multiple soil moisture datasets and remotely sensed greenness. This reveals substantial impacts of soil moisture alone that reduce GPP by up to 40% at sites located in sub-humid, semi-arid or arid regions. For sites in relatively moist climates, we find, paradoxically, a muted fLUE response to drying soil, but reduced fLUE under wet conditions. fLUE identifies substantial drought impacts that are not captured when relying solely on VPD and greenness changes and, when seasonally recurring, are missed by traditional, anomaly-based drought indices. Counter to common assumptions, fLUE reductions are largest in drought-deciduous vegetation, including grasslands. Our results highlight the necessity to account for soil moisture limitation in terrestrial primary productivity data products, especially for drought-related assessments. © 2018 The Authors. New Phytologist © 2018 New Phytologist Trust.

N-P Co-Limitation of Primary Production and Response of Arthropods to N and P in Early Primary Succession on Mount St. Helens Volcano

PubMed Central

Bishop, John G.; O'Hara, Niamh B.; Titus, Jonathan H.; Apple, Jennifer L.; Gill, Richard A.; Wynn, Louise

2010-01-01

Background The effect of low nutrient availability on plant-consumer interactions during early succession is poorly understood. The low productivity and complexity of primary successional communities are expected to limit diversity and abundance of arthropods, but few studies have examined arthropod responses to enhanced nutrient supply in this context. We investigated the effects of nitrogen (N) and phosphorus (P) addition on plant productivity and arthropod abundance on 24-yr-old soils at Mount St. Helens volcano. Methodology/Principal Findings We measured the relative abundance of eight arthropod orders and five families in plots that received N, P, or no nutrients for 3–5 years. We also measured plant % cover, leaf %N, and plant diversity. Vegetation responded rapidly to N addition but showed a lagged response to P that, combined with evidence of increased N fixation, suggested P-limitation to N availability. After 3 yrs of fertilization, orthopterans (primarily Anabrus simplex (Tettigoniidae) and Melanoplus spp (Acrididae)) showed a striking attraction to P addition plots, while no other taxa responded to fertilization. After 5 yrs of fertilization, orthopteran density in the same plots increased 80%–130% with P addition and 40% with N. Using structural equation modeling, we show that in year 3 orthopteran abundance was associated with a P-mediated increase in plant cover (or correlated increases in resource quality), whereas in year 5 orthopteran density was not related to cover, diversity or plant %N, but rather to unmeasured effects of P, such as its influence on other aspects of resource quality. Conclusions/Significance The marked surprising response to P by orthopterans, combined with a previous observation of P-limitation in lepidopteran herbivores at these sites, suggests that P-mediated effects of food quantity or quality are critical to insect herbivores in this N-P co-limited primary successional system. Our results also support a previous suggestion that the availability of N in these soils is P-limited. PMID:21049006

Effect of inorganic N enrichment on basal pelagic production in boreal unproductive lakes along a gradient of DOC concentration - results after 1 year of fertilization

NASA Astrophysics Data System (ADS)

Deininger, Anne; Bergström, Ann-Kristin

2013-04-01

Input of inorganic nitrogen (N) in boreal unproductive lakes is steadily increasing due to anthropogenic deposition and usage of artificial fertilizers. N enrichment is predicted to have a major impact on the ecosystem productivity and food web structure in unproductive clear-water and humic lakes. For a long time, pelagic primary production (PP) has been mainly regarded as being phosphorus (P) limited. However, recent studies have shown that this is not true for unproductive lakes in northern Sweden, where phytoplankton is mainly N limited. Addition of inorganic N should therefore increase phytoplankton growth in these lake ecosystems. Bacterial production (BP) in the pelagic habitat, on the other hand, is usually limited by P. Nevertheless, elevated N could have a stimulating effect on BP through enhanced leakage of dissolved organic carbon (DOC) from phytoplankton following enhanced N availability and higher PP. Further, unproductive lakes vary naturally in their DOC content which affects overall nutrient- (N and P), energy- and carbon availability (light, C) for the basal producers (phytoplankton, bacteria). It is still not clear how higher inorganic N availability affects primary- and bacterial production in the pelagic in lakes with varying DOC content. We subsequently assessed this question by conducting whole-lake fertilization experiments with inorganic N additions in 6 lakes with varying DOC concentrations (2 low DOC; 2 medium DOC; 2 high DOC). For each DOC level one lake functioned as a reference and one was fertilized with N. Year 2011 was a reference year (all lakes) and 2012 was the first year of fertilization (i.e. in 3 lakes). Measurements included basal productivity such as primary production and bacteria production, lake water chemistry and physical parameters (i.e. light, temperature). The results of this study will help to develop a conceptual understanding of how increased inorganic N availability (through land use such as forestry and/or enhanced N deposition) affects basal productivity in boreal lakes which can have consequences for overall whole lake-ecosystem productivity and functioning.

A modeling study examining the impact of nutrient boundaries ...

EPA Pesticide Factsheets

A mass balance eutrophication model, Gulf of Mexico Dissolved Oxygen Model (GoMDOM), has been developed and applied to describe nitrogen, phosphorus and primary production in the Louisiana shelf of the Gulf of Mexico. Features of this model include bi-directional boundary exchanges, an empirical site-specific light attenuation equation, estimates of 56 river loads and atmospheric loads. The model was calibrated for 2006 by comparing model output to observations in zones that represent different locations in the Gulf. The model exhibited reasonable skill in simulating the phosphorus and nitrogen field data and primary production observations. The model was applied to generate a nitrogen mass balance estimate, to perform sensitivity analysis to compare the importance of the nutrient boundary concentrations versus the river loads on nutrient concentrations and primary production within the shelf, and to provide insight into the relative importance of different limitation factors on primary production. The mass budget showed the importance of the rivers as the major external nitrogen source while the atmospheric load contributed approximately 2% of the total external load. Sensitivity analysis showed the importance of accurate estimates of boundary nitrogen concentrations on the nitrogen levels on the shelf, especially at regions further away from the river influences. The boundary nitrogen concentrations impacted primary production less than nitrogen concent

Assessing the Roles of Iron, Macronutrients and Wet deposition in Controlling Phytoplankton Growth in Seasonally Oligotrophic Waters of the Mid-Atlantic Bight

NASA Astrophysics Data System (ADS)

Sedwick, P.; Mulholland, M. R.; Najjar, R.; Bernhardt, P. W.; Price, L. M.; Sohst, B. M.; Sookhdeo, C.; Widner, B.

2016-02-01

The role of iron supply in regulating phytoplankton production in high-nutrient, low-chlorophyll ocean regions has been well established. Less clear, however, is the importance of iron for phytoplankton processes in other oceanic settings, such as coastal and oligotrophic waters, where differential changes in the supply and removal of dissolved iron (dFe) can result in limitation or co-limitation of growth due to iron deficiency. One such region of interest is the Mid-Atlantic Bight (MAB), where previous field experiments have provided some evidence of co-limitation of algal growth by nitrogen and iron. In summer 2014 we conducted field sampling and shipboard experiments to assess the role of iron and macronutrient availability in controlling primary production in seasonally oligotrophic waters over the MAB continental slope, with a focus on the the impacts of wet deposition. Our results indicate that nitrogen was the proximate limiting nutrient, with a secondary limitation imposed by availability of phosphorus; we found no evidence for a deficiency in dFe, which was present at concentrations in the range 0.3-0.9 nM. Phytoplankton growth was clearly stimulated by the addition of natural rainwater, suggesting that summer rain events stimulate primary production in the MAB by contributing new nitrogen (primarily as ammonium) and phosphorus, whilst maintaining iron-replete conditions.

How phosphorus limitation can control climatic gas sources and sinks

NASA Astrophysics Data System (ADS)

Gypens, Nathalie; Borges, Alberto V.; Ghyoot, Caroline

2017-04-01

Since the 1950's, anthropogenic activities severely increased river nutrient loads in European coastal areas. Subsequent implementation of nutrient reduction policies have considerably reduced phosphorus (P) loads from mid-1980's, while nitrogen (N) loads were maintained, inducing a P limitation of phytoplankton growth in many eutrophied coastal areas such as the Southern Bight of the North Sea (SBNS). When dissolved inorganic phosphorous (DIP) is limiting, most phytoplankton organisms are able to indirectly acquire P from dissolved organic P (DOP). We investigate the impact of DOP use on the importance of phytoplankton production and atmospheric fluxes of CO2 and dimethylsulfide (DMS) in the SBNS from 1951 to 2007 using an extended version of the R-MIRO-BIOGAS model. This model includes a description of the ability of phytoplankton organisms to use DOP as a source of P. Results show that primary production can increase up to 70% due to DOP uptake in limiting DIP conditions. Consequently, simulated DMS emissions double while CO2 emissions to the atmosphere decrease, relative to the reference simulation without DOP uptake. At the end of the simulated period (late 2000's), the net direction of air-sea CO2 annual flux, changed from a source to a sink for atmospheric CO2 in response to use of DOP and increase of primary production.

Model-based analysis of environmental controls over ecosystem primary production in an alpine tundra dry meadow

DOE PAGES

Fan, Zhaosheng; Neff, Jason C.; Wieder, William R.

2016-02-10

We investigated several key limiting factors that control alpine tundra productivity by developing an ecosystem biogeochemistry model. The model simulates the coupled cycling of carbon (C), nitrogen (N), and phosphorus (P) and their interactions with gross primary production (GPP). It was parameterized with field observations from an alpine dry meadow ecosystem using a global optimization strategy to estimate the unknown parameters. The model, along with the estimated parameters, was first validated against independent data and then used to examine the environmental controls over plant productivity. Our results show that air temperature is the strongest limiting factor to GPP in themore » early growing season, N availability becomes important during the middle portion of the growing season, and soil moisture is the strongest limiting factors by late in the growing season. Overall, the controls over GPP during the growing season, from strongest to weakest, are soil moisture content, air temperature, N availability, and P availability. This simulation provides testable predictions of the shifting nature of physical and nutrient limitations on plant growth. The model also indicates that changing environmental conditions in the alpine will likely lead to changes in productivity. For example, warming eliminates the control of P availability on GPP and makes N availability surpass air temperature to become the second strongest limiting factor. In contrast, an increase in atmospheric nutrient deposition eliminates the control of N availability and enhances the importance of P availability. Furthermore, these analyses provide a quantitative and conceptual framework that can be used to test predictions and refine ecological analyses at this long-term ecological research site.« less

Model-based analysis of environmental controls over ecosystem primary production in an alpine tundra dry meadow

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fan, Zhaosheng; Neff, Jason C.; Wieder, William R.

We investigated several key limiting factors that control alpine tundra productivity by developing an ecosystem biogeochemistry model. The model simulates the coupled cycling of carbon (C), nitrogen (N), and phosphorus (P) and their interactions with gross primary production (GPP). It was parameterized with field observations from an alpine dry meadow ecosystem using a global optimization strategy to estimate the unknown parameters. The model, along with the estimated parameters, was first validated against independent data and then used to examine the environmental controls over plant productivity. Our results show that air temperature is the strongest limiting factor to GPP in themore » early growing season, N availability becomes important during the middle portion of the growing season, and soil moisture is the strongest limiting factors by late in the growing season. Overall, the controls over GPP during the growing season, from strongest to weakest, are soil moisture content, air temperature, N availability, and P availability. This simulation provides testable predictions of the shifting nature of physical and nutrient limitations on plant growth. The model also indicates that changing environmental conditions in the alpine will likely lead to changes in productivity. For example, warming eliminates the control of P availability on GPP and makes N availability surpass air temperature to become the second strongest limiting factor. In contrast, an increase in atmospheric nutrient deposition eliminates the control of N availability and enhances the importance of P availability. Furthermore, these analyses provide a quantitative and conceptual framework that can be used to test predictions and refine ecological analyses at this long-term ecological research site.« less

Iron, phytoplankton growth, and the carbon cycle.

PubMed

Street, Joseph H; Paytan, Adina

2005-01-01

Iron is an essential nutrient for all living organisms. Iron is required for the synthesis of chlorophyll and of several photosynthetic electron transport proteins and for the reduction of CO2, SO4(2-), and NO3(-) during the photosynthetic production of organic compounds. Iron concentrations in vast areas of the ocean are very low (<1 nM) due to the low solubility of iron in oxic seawater. Low iron concentrations have been shown to limit primary production rates, biomass accumulation, and ecosystem structure in a variety of open-ocean environments, including the equatorial Pacific, the subarctic Pacific and the Southern Ocean and even in some coastal areas. Oceanic primary production, the transfer of carbon dioxide into organic carbon by photosynthetic plankton (phytoplankton), is one process by which atmospheric CO2 can be transferred to the deep ocean and sequestered for long periods of time. Accordingly, iron limitation of primary producers likely plays a major role in the global carbon cycle. It has been suggested that variations in oceanic primary productivity, spurred by changes in the deposition of iron in atmospheric dust, control atmospheric CO2 concentrations, and hence global climate, over glacial-interglacial timescales. A contemporary application of this "iron hypothesis" promotes the large-scale iron fertilization of ocean regions as a means of enhancing the ability of the ocean to store anthropogenic CO2 and mitigate 21st century climate change. Recent in situ iron enrichment experiments in the HNLC regions, however, cast doubt on the efficacy and advisability of iron fertilization schemes. The experiments have confirmed the role of iron in regulating primary productivity, but resulted in only small carbon export fluxes to the depths necessary for long-term sequestration. Above all, these experiments and other studies of iron biogeochemistry over the last two decades have begun to illustrate the great complexity of the ocean system. Attempts to engineer this system are likely to provoke a similarly complex, unpredictable response.

Iron solubility driven by speciation in dust sources to the ocean

USGS Publications Warehouse

Schroth, A.W.; Crusius, John; Sholkovitz, E.R.; Bostick, B.C.

2009-01-01

Although abundant in the Earths crust, iron is present at trace concentrations in sea water and is a limiting nutrient for phytoplankton in approximately 40% of the ocean. Current literature suggests that aerosols are the primary external source of iron to offshore waters, yet controls on iron aerosol solubility remain unclear. Here we demonstrate that iron speciation (oxidation state and bonding environment) drives iron solubility in arid region soils, glacial weathering products (flour) and oil combustion products (oil fly ash). Iron speciation varies by aerosol source, with soils in arid regions dominated by ferric (oxy)hydroxides, glacial flour by primary and secondary ferrous silicates and oil fly ash by ferric sulphate salts. Variation in iron speciation produces systematic differences in iron solubility: less than 1% of the iron in arid soils was soluble, compared with 2-3% in glacial products and 77-81% in oil combustion products, which is directly linked to fractions of more soluble phases. We conclude that spatial and temporal variations in aerosol iron speciation, driven by the distribution of deserts, glaciers and fossil-fuel combustion, could have a pronounced effect on aerosol iron solubility and therefore on biological productivity and the carbon cycle in the ocean. ?? 2009 Macmillan Publishers Limited.

Modeling spatial patterns of limits to production of deposit-feeders and ectothermic predators in the northern Bering Sea

NASA Astrophysics Data System (ADS)

Lovvorn, James R.; Jacob, Ute; North, Christopher A.; Kolts, Jason M.; Grebmeier, Jacqueline M.; Cooper, Lee W.; Cui, Xuehua

2015-03-01

Network models can help generate testable predictions and more accurate projections of food web responses to environmental change. Such models depend on predator-prey interactions throughout the network. When a predator currently consumes all of its prey's production, the prey's biomass may change substantially with loss of the predator or invasion by others. Conversely, if production of deposit-feeding prey is limited by organic matter inputs, system response may be predictable from models of primary production. For sea floor communities of shallow Arctic seas, increased temperature could lead to invasion or loss of predators, while reduced sea ice or change in wind-driven currents could alter organic matter inputs. Based on field data and models for three different sectors of the northern Bering Sea, we found a number of cases where all of a prey's production was consumed but the taxa involved varied among sectors. These differences appeared not to result from numerical responses of predators to abundance of preferred prey. Rather, they appeared driven by stochastic variations in relative biomass among taxa, due largely to abiotic conditions that affect colonization and early post-larval survival. Oscillatory tendencies of top-down versus bottom-up interactions may augment these variations. Required inputs of settling microalgae exceeded existing estimates of annual primary production by 50%; thus, assessing limits to bottom-up control depends on better corrections of satellite estimates to account for production throughout the water column. Our results suggest that in this Arctic system, stochastic abiotic conditions outweigh deterministic species interactions in food web responses to a varying environment.

A new function for cypress knees? Forest composition facilitates aquatic bryophyte extension of oxic periods in blackwater cyperess swaps

USDA-ARS?s Scientific Manuscript database

Limited aquatic primary productivity is often cited as a factor behind low oxygen levels observed in forested blackwater rivers. However, submerged trunks of the same trees that limit light with their canopy also provide stable substrate for growth of aquatic bryophytes. We use laboratory and fiel...

Net nitrogen mineralization in natural ecosystems across the conterminous US

Treesearch

LeeAnna Y. Chapman; Steven G. McNulty; Ge Sun; Yang Zhang

2013-01-01

Nitrogen is the primary nutrient limiting ecosystem productivity over most of the US. Although soil nitrogen content is important, knowledge about its spatial extent at the continental scale is limited. The objective of this study was to estimate net nitrogen mineralization for the conterminous US (CONUS) using an empirical modeling approach by scaling up site level...

The Search for Efficiency in Arboreal Ray Tracing Applications

NASA Astrophysics Data System (ADS)

van Leeuwen, M.; Disney, M.; Chen, J. M.; Gomez-Dans, J.; Kelbe, D.; van Aardt, J. A.; Lewis, P.

2016-12-01

Forest structure significantly impacts a range of abiotic conditions, including humidity and the radiation regime, all of which affect the rate of net and gross primary productivity. Current forest productivity models typically consider abstract media to represent the transfer of radiation within the canopy. Examples include the representation forest structure via a layered canopy model, where leaf area and inclination angles are stratified with canopy depth, or as turbid media where leaves are randomly distributed within space or within confined geometric solids such as blocks, spheres or cones. While these abstract models are known to produce accurate estimates of primary productivity at the stand level, their limited geometric resolution restricts applicability at fine spatial scales, such as the cell, leaf or shoot levels, thereby not addressing the full potential of assimilation of data from laboratory and field measurements with that of remote sensing technology. Recent research efforts have explored the use of laser scanning to capture detailed tree morphology at millimeter accuracy. These data can subsequently be used to combine ray tracing with primary productivity models, providing an ability to explore trade-offs among different morphological traits or assimilate data from spatial scales, spanning the leaf- to the stand level. Ray tracing has a major advantage of allowing the most accurate structural description of the canopy, and can directly exploit new 3D structural measurements, e.g., from laser scanning. However, the biggest limitation of ray tracing models is their high computational cost, which currently limits their use for large-scale applications. In this talk, we explore ways to more efficiently exploit ray tracing simulations and capture this information in a readily computable form for future evaluation, thus potentially enabling large-scale first-principles forest growth modelling applications.

Modeling Japan-South Seas trade in forest products.

Treesearch

J.R. Vincent

1987-01-01

The international trade of forest products has generated increasing research interest, yet experience with modeling such trade is limited. Primary issues include the effects of trade barriers and exchange rates on trade patterns and national welfare. This paper attempts to add to experience by modeling hardwood log, lumber, and plywood trade in a region that has been...

Primary Healthcare Provider Knowledge, Beliefs and Clinic-Based Practices Regarding Alternative Tobacco Products and Marijuana: A Qualitative Study

ERIC Educational Resources Information Center

Bascombe, Ta Misha S.; Scott, Kimberly N.; Ballard, Denise; Smith, Samantha A.; Thompson, Winifred; Berg, Carla J.

2016-01-01

Use prevalence of alternative tobacco products and marijuana has increased dramatically. Unfortunately, clinical guidelines have focused on traditional cigarettes with limited attention regarding these emerging public health issues. Thus, it is critical to understand how healthcare professionals view this issue and are responding to it. This…

Uptake and trans-membrane transport of petroleum hydrocarbons by microorganisms

PubMed Central

Hua, Fei; Wang, Hong Qi

2014-01-01

Petroleum-based products are a primary energy source in the industry and daily life. During the exploration, processing, transport and storage of petroleum and petroleum products, water or soil pollution occurs regularly. Biodegradation of the hydrocarbon pollutants by indigenous microorganisms is one of the primary mechanisms of removal of petroleum compounds from the environment. However, the physical contact between microorganisms and hydrophobic hydrocarbons limits the biodegradation rate. This paper presents an updated review of the petroleum hydrocarbon uptake and transport across the outer membrane of microorganisms with the help of outer membrane proteins. PMID:26740752

FindPrimaryPairs: An efficient algorithm for predicting element-transferring reactant/product pairs in metabolic networks.

PubMed

Steffensen, Jon Lund; Dufault-Thompson, Keith; Zhang, Ying

2018-01-01

The metabolism of individual organisms and biological communities can be viewed as a network of metabolites connected to each other through chemical reactions. In metabolic networks, chemical reactions transform reactants into products, thereby transferring elements between these metabolites. Knowledge of how elements are transferred through reactant/product pairs allows for the identification of primary compound connections through a metabolic network. However, such information is not readily available and is often challenging to obtain for large reaction databases or genome-scale metabolic models. In this study, a new algorithm was developed for automatically predicting the element-transferring reactant/product pairs using the limited information available in the standard representation of metabolic networks. The algorithm demonstrated high efficiency in analyzing large datasets and provided accurate predictions when benchmarked with manually curated data. Applying the algorithm to the visualization of metabolic networks highlighted pathways of primary reactant/product connections and provided an organized view of element-transferring biochemical transformations. The algorithm was implemented as a new function in the open source software package PSAMM in the release v0.30 (https://zhanglab.github.io/psamm/).

Primary healthcare provider knowledge, beliefs and clinic-based practices regarding alternative tobacco products and marijuana: a qualitative study

PubMed Central

Bascombe, Ta Misha S.; Scott, Kimberly N.; Ballard, Denise; Smith, Samantha A.; Thompson, Winifred; Berg, Carla J.

2016-01-01

Use prevalence of alternative tobacco products and marijuana has increased dramatically. Unfortunately, clinical guidelines have focused on traditional cigarettes with limited attention regarding these emerging public health issues. Thus, it is critical to understand how healthcare professionals view this issue and are responding to it. This qualitative study explored knowledge, beliefs and clinic-based practices regarding traditional and alternative tobacco products (cigar-like products, smokeless tobacco, hookah, e-cigarettes) and marijuana among rural and urban Georgia primary healthcare providers. The sample comprised 20 healthcare providers in primary care settings located in the Atlanta Metropolitan area and rural southern Georgia who participated in semi-structured interviews. Results indicated a lack of knowledge about these products, with some believing that some products were less harmful than traditional cigarettes or that they may be effective in promoting cessation or harm reduction. Few reported explicitly assessing use of these various products in clinic. In addition, healthcare providers reported a need for empirical evidence to inform their clinical practice. Healthcare providers must systematically assess use of the range of tobacco products and marijuana. Evidence-based recommendations or information sources are needed to inform clinical practice and help providers navigate conversations with patients using or inquiring about these products. PMID:26802106

Stream primary producers relate positively to watershed natural gas measures in north-central Arkansas streams.

PubMed

Austin, Bradley J; Hardgrave, Natalia; Inlander, Ethan; Gallipeau, Cory; Entrekin, Sally; Evans-White, Michelle A

2015-10-01

Construction of unconventional natural gas (UNG) infrastructure (e.g., well pads, pipelines) is an increasingly common anthropogenic stressor that increases potential sediment erosion. Increased sediment inputs into nearby streams may decrease autotrophic processes through burial and scour, or sediment bound nutrients could have a positive effect through alleviating potential nutrient limitations. Ten streams with varying catchment UNG well densities (0-3.6 wells/km(2)) were sampled during winter and spring of 2010 and 2011 to examine relationships between landscape scale disturbances associated with UNG activity and stream periphyton [chlorophyll a (Chl a)] and gross primary production (GPP). Local scale variables including light availability and water column physicochemical variables were measured for each study site. Correlation analyses examined the relationships of autotrophic processes and local scale variables with the landscape scale variables percent pasture land use and UNG metrics (well density and well pad inverse flow path length). Both GPP and Chl a were primarily positively associated with the UNG activity metrics during most sample periods; however, neither landscape variables nor response variables correlated well with local scale factors. These positive correlations do not confirm causation, but they do suggest that it is possible that UNG development can alleviate one or more limiting factors on autotrophic production within these streams. A secondary manipulative study was used to examine the link between nutrient limitation and algal growth across a gradient of streams impacted by natural gas activity. Nitrogen limitation was common among minimally impacted stream reaches and was alleviated in streams with high UNG activity. These data provide evidence that UNG may stimulate the primary production of Fayetteville shale streams via alleviation of N-limitation. Restricting UNG activities from the riparian zone along with better enforcement of best management practices should help reduce these possible impacts of UNG activities on stream autotrophic processes. Copyright © 2015 Elsevier B.V. All rights reserved.

Atmospheric iron fluxes in the northern region of the Gulf of California: Implications for primary production and potential Fe limitation

NASA Astrophysics Data System (ADS)

Muñoz-Barbosa, Albino; Segovia-Zavala, José A.; Huerta-Diaz, Miguel Angel; Delgadillo-Hinojosa, Francisco; Torres-Delgado, Eunice V.; Lares, María L.; Marinone, Silvio G.; Gutiérrez-Galindo, Efraín A.

2017-11-01

To study the temporal variability of atmospheric mineral dust and Fe fluxes to the northern region of the Gulf of California, dust samples were collected at San Felipe, Baja California (Site 1) and Puerto Peñasco, Sonora (Site 2), from May 2010 to December 2011. Dust fluxes were partially associated with monsoon circulation, with highest (38 ± 20 mg m-2 d-1) and lowest (8.8 ± 4.9 mg m-2 d-1) fluxes linked to southwesterly winds (monsoon season) and north-northwesterly winds (non-monsoon season), respectively. Our analysis suggests that the surrounding deserts are the most probable source of dust arriving into the Gulf of California. However, analyses of Al and Fe concentrations in dusts showed no trends that could identify specific particulate Fe provenance. Average particulate Fe atmospheric fluxes (FeAtm) showed no clear temporal trends and their magnitudes (3.2 ± 3.4 and 6 ± 10 μmol m-2 d-1 for sites 1 and 2, respectively) could be considered medium-to-low in magnitude within a global context. An Fe limitation index (FeLI), calculated as the ratio of phytoplankton Fe requirements to atmospheric and upwelling Fe fluxes, is proposed to estimate the impact of atmospheric mineral dust on phytoplankton primary production in surface waters of the Gulf of California. On a seasonal time scale, FeLI results suggest that under winter conditions, there is no evidence of Fe limitation because upwelling Fe contribution (FeUp) is high enough to support primary production. In contrast, during summer conditions, when FeUp is very low or negligible, high FeAtm combined with high particulate Fe dissolution factors could prevent the northern Gulf of California from becoming Fe-limited. Finally, we postulate that at an interannual scale, conditions prevailing during ENSO events could increase atmospheric Fe fluxes to the Gulf of California, further contributing to prevent Fe limitation in this marginal sea.

Agricultural Yield Trends in Malawi: Utilizing Remote Sensing to Observe Crop Productivity and Sensitivity to Biophysical and Social Drivers

NASA Astrophysics Data System (ADS)

Peter, B.

2015-12-01

The primary objective of this research is to distinguish primary and secondary trends in the spatiotemporal variability of agricultural productivity in Malawi. The assessment was performed by analyzing the Net Primary Productivity (NPP) product derived from NASA MODIS satellite imagery and by drawing comparisons between individual land areas and the country-wide statistics. The data were categorized by placing each individual land area into one of six categories: low, average, or high productivity, and whether or not they were resilient or sensitive to biophysical and/or social production drivers. In order to mitigate productivity interference from forest and other land cover types, a custom agricultural land use was developed. Five land cover datasets, including FAO, GLC, IFPRI, GlobCover, and MODIS were combined to minimize errors of commission. Model assessment occurred via field work in Malawi. Approximately 200 sites were visited across nearly the entire extent of the country. Cropland and land cover were assessed via visual inspection, true color/near-infrared photography, and on-site interviews with farmers and extension officers to inquire about productivity and limiting factors for yield. Additionally, we present a continental scale application of the model to demonstrate its performance across scales.

Nutrient limitations to aquatic production along an alluvial groundwater connectivity gradient in semi-arid northwest Australia

NASA Astrophysics Data System (ADS)

Iles, Jordan; Pettit, Neil; Grierson, Pauline

2017-04-01

Primary production of intermittent streams in hot arid regions, such as the geologically ancient Pilbara region of northwest Australia, is strongly limited by both water and nutrient availability. Pulses of allochthonous materials can be significant source of nutrients and carbon during short periods of connected flow. However, during interflow periods, which may last months to years, surface water retracts to a series of surface disconnected pools, where hydrological processes including hyporheic exchange and evapo-concentration of ions are of increasing importance in maintaining bioavailable nutrients for primary production. In the Pilbara, the persistence of individual pools during interflow periods is strongly linked to local topography and connectivity to alluvial groundwater. We might thus expect that autochthonous production is greater in pools that become disconnected from groundwater due to increased concentration of nutrients. We thus investigated the importance of nitrogen (N) and phosphorus (P) limitations on aquatic production along an alluvial groundwater connectivity gradient. First, we used in-situ bottle incubations and a 13C-enriched NaHCO3 isotopic tracer to measure rates of charophyte and phytoplankton production in response to nutrient amendments. Second, we paired a nutrient diffusing substrata limitation experiment with high performance liquid chromatography to i) identify which nutrient(s) limit periphyton production, and ii) how the periphyton community structure changes within pools along the alluvial gradient. Charophyte production was 2 mg C g-1 DW h-1 while phytoplankton production was orders of magnitude less (˜0.01 mg C g-1 DW h-1). Although charophytes showed no clear respiration response to short-term nutrient addition, productivity was positively correlated to both charophyte N and P content (R2 = 0.65, p < 0.001 and R2 = 0.41, p < 0.001 respectively). This relationship was stronger in pools which were disconnected from alluvial groundwater (N: R2 = 0.92, p < 0.001 and P: R2 = 0.77, p < 0.001). Short-term phytoplankton production was N limited in some pools (F > 7.6, p < 0.009) but this was not directly linked to alluvial connectivity. The chemotaxonomic response of periphyton algae to experimental increases of biologically available N and P showed clear shifts in production and community composition, with nitrogen additions aiding in production, whilst P additions alone did not increase production and in some instances inhibited growth of some taxa. Unique photosynthetic pigment peaks were identified in each sample and matched with published values. Clearly both N and P, along with alluvial groundwater connectivity, have significant and complex roles in regulating production in these pools. Altered hydrology due to changing climate or water abstraction may thus have significant but as yet poorly understood impacts on the ecological functioning of intermittent streams.

Estimators of primary production for interpretation of remotely sensed data on ocean color

NASA Technical Reports Server (NTRS)

Platt, Trevor; Sathyendranath, Shubha

1993-01-01

The theoretical basis is explained for some commonly used estimators of daily primary production in a vertically uniform water column. These models are recast into a canonical form, with dimensionless arguments, to facilitate comparison with each other and with an analytic solution. The limitations of each model are examined. The values of the photoadaptation parameter I(k) observed in the ocean are analyzed, and I(k) is used as a scale to normalize the surface irradiance. The range of this scaled irradiance is presented. An equation is given for estimation of I(k) from recent light history. It is shown how the models for water column production can be adapted for estimation of the production in finite layers. The distinctions between model formulation, model implementation and model evaluation are discussed. Recommendations are given on the choice of algorithm for computation of daily production according to the degree of approximation acceptable in the result.

Total Belowground Carbon Allocation in a Fast-growing Eucalyptus Plantation Estimated Using a Carbon Balance Approach

Treesearch

Christian P. Giardina; Michael G. Ryan

2002-01-01

Trees allocate a large portion of gross primary production belowground for the production and maintenance of roots and mycorrhizae. The difficulty of directly measuring total belowground carbon allocation (TBCA) has limited our understanding of belowground carbon (C) cycling and the factors that control this important flux. We measured TBCA over 4 years using a...

Exploring the Potential Impact of Greenland Meltwater on Stratification, Photosynthetically Active Radiation, and Primary Production in the Labrador Sea

NASA Astrophysics Data System (ADS)

Oliver, Hilde; Luo, Hao; Castelao, Renato M.; van Dijken, Gert L.; Mattingly, Kyle S.; Rosen, Joshua J.; Mote, Thomas L.; Arrigo, Kevin R.; Rennermalm, Åsa K.; Tedesco, Marco; Yager, Patricia L.

2018-04-01

In July 2012, the surface of the Greenland Ice Sheet (GrIS) melted to an extent unprecedented over the last 100 years; we questioned the potential for such an extreme melt event to impact marine phytoplankton offshore. We hypothesized that stratification from meltwater could reduce light limitation for phytoplankton, and used a suite of numerical models to quantify the impact for 2003-2012. Because much of the 2012 meltwater discharged from southern Greenland, our study focused on the southwestern and southeastern coasts of Greenland, and the Labrador Sea. A 1-D phytoplankton model used output from a Regional Ocean Modeling System (ROMS) coupled with a Regional Climate Model and a hydrological model of meltwater from runoff sources on the ice sheet, peripheral glaciers, and tundra. ROMS was run with and without meltwater to test the sensitivity of phytoplankton photosynthetic rates to the meltwater input. With meltwater, the pycnocline was shallower during late summer and early fall and thus light limitation on photosynthesis was reduced. Averaged over all years, added meltwater had the potential to increase gross primary production by 3-12% in the summer (July-August), and 13-60% in the fall (September-October). This meltwater effect was amplified when light was more limiting, and thus was greatest in the fall, under cloudier conditions, with higher self-shading, and with more light-sensitive phytoplankton groups. As the GrIS melt is projected to increase, late summer primary production in this region has the potential to increase as well, which could constitute an important biosphere response to high-latitude climate change.

Elucidating the Relationship Between Phytoplankton and Primary Production in the Sargasso Sea Using New Observations of Nanoplankton and Picoplankton.

NASA Astrophysics Data System (ADS)

Matheson, J.; Johnson, R. J.; Bates, N. R.; Parsons, R. J.

2016-02-01

Attempts to model primary production in the subsurface of the Sargasso Sea frequently use HPLC marker pigments to infer phytoplankton community structure, which relies upon assumptions about the phytoplankton community typically determined with limited site-specific data. Recent estimates suggest that nano- and picoplankton account for 90% of the phytoplankton community at BATS and factors such as elevated growth rates and high abundances likely allow these two size classes to exert a strong influence on primary production. To help assess the contribution of nano- and picoplankton on primary production at the BATS site we determine abundances and biovolumes through direct measurements with epifluorescence microscopy in conjunction with flow cytometer picoplankton counts. Using this approach we are able to quantify prymnesiophytes, heterotrophic nano- and dinoflagellates, mixotrophic dinoflagellates, ciliates, diatoms, pico- and nano eukaryotes, and Prochlorococcus. Preliminary analysis of summertime distributions show prymnesiophytes are the dominant nanoplankton group (average upper 140 m concentration of 500 cells ml-1) although heterotrophic nano- and dinoflagellates makeup a greater fraction of nanoplankton biovolume. During the summer period, pico-eukaryotes and Prochlorococcus were found to be the dominant picoplankton groups, which both increased with depth down to the deep chlorophyll maximum where they appear to drive variability. Using these direct observations we investigate the seasonal relationship between phytoplankton community and primary production, specifically by contrasting the stratified summer phase with a well-mixed winter system. Finally, we use these community structure observations with HPLC data to develop algorithms for taxonomy models (i.e. CHEMTAX) to assess modes of variability in phytoplankton community and consequential influences on primary production for the past 25 years at the BATS site.

Linking FRRF Derived Photophysiology with Carbon-based Primary Productivity: Insights from Concepts of Cellular Energy Allocation

NASA Astrophysics Data System (ADS)

Schuback, N.; Schallenberg, C.; Duckham, C.; Flecken, M.; Maldonado, M. T.; Tortell, P. D.

2016-02-01

Active chlorophyll a fluorescence approaches, including fast repetition rate fluorometry (FRRF), have the potential to provide estimates of phytoplankton primary productivity at unprecedented spatial and temporal resolution. FRRF-derived productivity rates are based on estimates of charge separation in photosystem II (ETRRCII), which must be converted into ecologically relevant units of carbon fixation. Understanding sources of variability in the coupling of ETRRCII and carbon fixation provides important physiological insight into phytoplankton photosynthesis, and is critical for the application of FRRF as a primary productivity measurement tool. We present data from a series of experiments during which we simultaneously measured phytoplankton carbon fixation and ETRRCII in the iron-limited NE subarctic Pacific. Our results show significant variability of the derived conversion factor (Ve:C/nPSII), with highest values observed under conditions of excess excitation pressure at the level of photosystem II, caused by high light and/or low iron. Our results will be discussed in the context of metabolic plasticity, which evolved in phytoplankton to simultaneously maximize growth and provide photoprotection under fluctuating light and limiting nutrient availabilities. Because the derived conversion factor is associated with conditions of excess light, it correlates with the expression of non-photochemical quenching (NPQ) in the pigment antenna, also derived from FRRF measurements. Our results demonstrate a significant correlation between NPQ and the conversion factor Ve:C/nPSII, and the potential of this relationship to improve FRRF-based estimates of phytoplankton carbon fixation rates is discussed.

The impact of alternative trait-scaling hypotheses for the maximum photosynthetic carboxylation rate ( V cmax) on global gross primary production [The impact of alternative V cmax trait-scaling hypotheses on global gross primary production

DOE PAGES

Walker, Anthony P.; Quaife, Tristan; van Bodegom, Peter M.; ...

2017-06-23

Here, the maximum photosynthetic carboxylation rate (V cmax) is an influential plant trait that has multiple scaling hypotheses, which is a source of uncertainty in predictive understanding of global gross primary production (GPP). Four trait-scaling hypotheses (plant functional type, nutrient limitation, environmental filtering, and plant plasticity) with nine specific implementations were used to predict global V cmax distributions and their impact on global GPP in the Sheffield Dynamic Global Vegetation Model (SDGVM). Global GPP varied from 108.1 to 128.2 PgC yr –1, 65% of the range of a recent model intercomparison of global GPP. The variation in GPP propagated throughmore » to a 27% coefficient of variation in net biome productivity (NBP). All hypotheses produced global GPP that was highly correlated ( r = 0.85–0.91) with three proxies of global GPP. Plant functional type-based nutrient limitation, underpinned by a core SDGVM hypothesis that plant nitrogen (N) status is inversely related to increasing costs of N acquisition with increasing soil carbon, adequately reproduced global GPP distributions. Further improvement could be achieved with accurate representation of water sensitivity and agriculture in SDGVM. Mismatch between environmental filtering (the most data-driven hypothesis) and GPP suggested that greater effort is needed understand V cmax variation in the field, particularly in northern latitudes.« less

The impact of alternative trait-scaling hypotheses for the maximum photosynthetic carboxylation rate ( V cmax) on global gross primary production [The impact of alternative V cmax trait-scaling hypotheses on global gross primary production

DOE Office of Scientific and Technical Information (OSTI.GOV)

Walker, Anthony P.; Quaife, Tristan; van Bodegom, Peter M.

Here, the maximum photosynthetic carboxylation rate (V cmax) is an influential plant trait that has multiple scaling hypotheses, which is a source of uncertainty in predictive understanding of global gross primary production (GPP). Four trait-scaling hypotheses (plant functional type, nutrient limitation, environmental filtering, and plant plasticity) with nine specific implementations were used to predict global V cmax distributions and their impact on global GPP in the Sheffield Dynamic Global Vegetation Model (SDGVM). Global GPP varied from 108.1 to 128.2 PgC yr –1, 65% of the range of a recent model intercomparison of global GPP. The variation in GPP propagated throughmore » to a 27% coefficient of variation in net biome productivity (NBP). All hypotheses produced global GPP that was highly correlated ( r = 0.85–0.91) with three proxies of global GPP. Plant functional type-based nutrient limitation, underpinned by a core SDGVM hypothesis that plant nitrogen (N) status is inversely related to increasing costs of N acquisition with increasing soil carbon, adequately reproduced global GPP distributions. Further improvement could be achieved with accurate representation of water sensitivity and agriculture in SDGVM. Mismatch between environmental filtering (the most data-driven hypothesis) and GPP suggested that greater effort is needed understand V cmax variation in the field, particularly in northern latitudes.« less

The variation of productivity and its allocation along a tropical elevation gradient: a whole carbon budget perspective.

PubMed

Malhi, Yadvinder; Girardin, Cécile A J; Goldsmith, Gregory R; Doughty, Christopher E; Salinas, Norma; Metcalfe, Daniel B; Huaraca Huasco, Walter; Silva-Espejo, Javier E; Del Aguilla-Pasquell, Jhon; Farfán Amézquita, Filio; Aragão, Luiz E O C; Guerrieri, Rossella; Ishida, Françoise Yoko; Bahar, Nur H A; Farfan-Rios, William; Phillips, Oliver L; Meir, Patrick; Silman, Miles

2017-05-01

Why do forest productivity and biomass decline with elevation? To address this question, research to date generally has focused on correlative approaches describing changes in woody growth and biomass with elevation. We present a novel, mechanistic approach to this question by quantifying the autotrophic carbon budget in 16 forest plots along a 3300 m elevation transect in Peru. Low growth rates at high elevations appear primarily driven by low gross primary productivity (GPP), with little shift in either carbon use efficiency (CUE) or allocation of net primary productivity (NPP) between wood, fine roots and canopy. The lack of trend in CUE implies that the proportion of photosynthate allocated to autotrophic respiration is not sensitive to temperature. Rather than a gradual linear decline in productivity, there is some limited but nonconclusive evidence of a sharp transition in NPP between submontane and montane forests, which may be caused by cloud immersion effects within the cloud forest zone. Leaf-level photosynthetic parameters do not decline with elevation, implying that nutrient limitation does not restrict photosynthesis at high elevations. Our data demonstrate the potential of whole carbon budget perspectives to provide a deeper understanding of controls on ecosystem functioning and carbon cycling. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

ANALYSIS OF PARTICULATE BOUND NUTRIENTS IN URBAN STORMWATER

EPA Science Inventory

Nutrients are important players in the degradation of waterbodies because they are often the elements that limit primary productivity and, hence, are the key factors controlling eutrophication. Eutrophication causes unsightly algal blooms leading to oxygen depletion, stress on o...

N and P as ultimate and proximate limiting nutrients in the northern Gulf of Mexico: implications for hypoxia reduction strategies

NASA Astrophysics Data System (ADS)

Fennel, Katja; Laurent, Arnaud

2018-05-01

The occurrence of hypoxia in coastal oceans is a long-standing and growing problem worldwide and is clearly linked to anthropogenic nutrient inputs. While the need for reducing anthropogenic nutrient loads is generally accepted, it is costly and thus requires scientifically sound nutrient-reduction strategies. Issues under debate include the relative importance of nitrogen (N) and phosphorus (P) as well as the magnitude of the reduction requirements. The largest anthropogenically induced hypoxic area in North American coastal waters (of 15 000 ± 5000 km2) forms every summer in the northern Gulf of Mexico where the Mississippi and Atchafalaya rivers deliver large amounts of freshwater and nutrients to the shelf. A 2001 plan for reducing this hypoxic area by nutrient management in the watershed called for a reduction of N loads. Since then evidence of P limitation during the time of hypoxia formation has arisen, and a dual nutrient-reduction strategy for this system has been endorsed. Here we report the first systematic analysis of the effects of single and dual nutrient load reductions from a spatially explicit physical-biogeochemical model for the northern Gulf of Mexico. The model has been shown previously to skillfully represent the processes important for hypoxic formation. Our analysis of an ensemble of simulations with stepwise reductions in N, P, and N and P loads provides insight into the effects of both nutrients on primary production and hypoxia, and it allows us to estimate what nutrient reductions would be required for single and dual nutrient-reduction strategies to reach the hypoxia target. Our results show that, despite temporary P limitation, N is the ultimate limiting nutrient for primary production in this system. Nevertheless, a reduction in P load would reduce hypoxia because primary production is P limited in the region where density stratification is conducive to hypoxia development, but reductions in N load have a bigger effect. Our simulations show that, at present loads, the system is almost saturated with N, in the sense that the sensitivity of primary production and hypoxia to N load is much lower than it would be at lower N loads. We estimate that reductions of 63±18 % in total N load or 48±21 % in total N and P load are necessary to reach a hypoxic area of 5000 km2, which is consistent with previous estimates from statistical regression models and highly simplified mechanistic models.

Amazon Forests Maintain Consistent Canopy Structure and Greenness During the Dry Season

NASA Technical Reports Server (NTRS)

Morton, Douglas C.; Nagol, Jyoteshwar; Carabajal, Claudia C.; Rosette, Jacqueline; Palace, Michael; Cook, Bruce D.; Vermote, Eric F.; Harding, David J.; North, Peter R. J.

2014-01-01

The seasonality of sunlight and rainfall regulates net primary production in tropical forests. Previous studies have suggested that light is more limiting than water for tropical forest productivity, consistent with greening of Amazon forests during the dry season in satellite data.We evaluated four potential mechanisms for the seasonal green-up phenomenon, including increases in leaf area or leaf reflectance, using a sophisticated radiative transfer model and independent satellite observations from lidar and optical sensors. Here we show that the apparent green up of Amazon forests in optical remote sensing data resulted from seasonal changes in near-infrared reflectance, an artefact of variations in sun-sensor geometry. Correcting this bidirectional reflectance effect eliminated seasonal changes in surface reflectance, consistent with independent lidar observations and model simulations with unchanging canopy properties. The stability of Amazon forest structure and reflectance over seasonal timescales challenges the paradigm of light-limited net primary production in Amazon forests and enhanced forest growth during drought conditions. Correcting optical remote sensing data for artefacts of sun-sensor geometry is essential to isolate the response of global vegetation to seasonal and interannual climate variability.

Amazon forests maintain consistent canopy structure and greenness during the dry season.

PubMed

Morton, Douglas C; Nagol, Jyoteshwar; Carabajal, Claudia C; Rosette, Jacqueline; Palace, Michael; Cook, Bruce D; Vermote, Eric F; Harding, David J; North, Peter R J

2014-02-13

The seasonality of sunlight and rainfall regulates net primary production in tropical forests. Previous studies have suggested that light is more limiting than water for tropical forest productivity, consistent with greening of Amazon forests during the dry season in satellite data. We evaluated four potential mechanisms for the seasonal green-up phenomenon, including increases in leaf area or leaf reflectance, using a sophisticated radiative transfer model and independent satellite observations from lidar and optical sensors. Here we show that the apparent green up of Amazon forests in optical remote sensing data resulted from seasonal changes in near-infrared reflectance, an artefact of variations in sun-sensor geometry. Correcting this bidirectional reflectance effect eliminated seasonal changes in surface reflectance, consistent with independent lidar observations and model simulations with unchanging canopy properties. The stability of Amazon forest structure and reflectance over seasonal timescales challenges the paradigm of light-limited net primary production in Amazon forests and enhanced forest growth during drought conditions. Correcting optical remote sensing data for artefacts of sun-sensor geometry is essential to isolate the response of global vegetation to seasonal and interannual climate variability.

Community Level Offset of Rain Use- and Transpiration Efficiency for a Heavily Grazed Ecosystem in Inner Mongolia Grassland

PubMed Central

Gao, Ying Z.; Giese, Marcus; Gao, Qiang; Brueck, Holger; Sheng, Lian X.; Yang, Hai J.

2013-01-01

Water use efficiency (WUE) is a key indicator to assess ecosystem adaptation to water stress. Rain use efficiency (RUE) is usually used as a proxy for WUE due to lack of transpiration data. Furthermore, RUE based on aboveground primary productivity (RUEANPP) is used to evaluate whole plant water use because root production data is often missing as well. However, it is controversial as to whether RUE is a reliable parameter to elucidate transpiration efficiency (TE), and whether RUEANPP is a suitable proxy for RUE of the whole plant basis. The experiment was conducted at three differently managed sites in the Inner Mongolia steppe: a site fenced since 1979 (UG79), a winter grazing site (WG) and a heavily grazed site (HG). Site HG had consistent lowest RUEANPP and RUE based on total net primary productivity (RUENPP). RUEANPP is a relatively good proxy at sites UG79 and WG, but less reliable for site HG. Similarly, RUEANPP is good predictor of transpiration efficiency based on aboveground net primary productivity (TEANPP) at sites UG79 and WG but not for site HG. However, if total net primary productivity is considered, RUENPP is good predictor of transpiration efficiency based on total net primary productivity (TENPP) for all sites. Although our measurements indicate decreased plant transpiration and consequentially decreasing RUE under heavy grazing, productivity was relatively compensated for with a higher TE. This offset between RUE and TE was even enhanced under water limited conditions and more evident when belowground net primary productivity (BNNP) was included. These findings suggest that BNPP should be considered when studies fucus on WUE of more intensively used grasslands. The consideration of the whole plant perspective and “real” WUE would partially revise our picture of system performance and therefore might affect the discussion on the C-sequestration and resilience potential of ecosystems. PMID:24058632

Community level offset of rain use- and transpiration efficiency for a heavily grazed ecosystem in inner Mongolia grassland.

PubMed

Gao, Ying Z; Giese, Marcus; Gao, Qiang; Brueck, Holger; Sheng, Lian X; Yang, Hai J

2013-01-01

Water use efficiency (WUE) is a key indicator to assess ecosystem adaptation to water stress. Rain use efficiency (RUE) is usually used as a proxy for WUE due to lack of transpiration data. Furthermore, RUE based on aboveground primary productivity (RUEANPP) is used to evaluate whole plant water use because root production data is often missing as well. However, it is controversial as to whether RUE is a reliable parameter to elucidate transpiration efficiency (TE), and whether RUEANPP is a suitable proxy for RUE of the whole plant basis. The experiment was conducted at three differently managed sites in the Inner Mongolia steppe: a site fenced since 1979 (UG79), a winter grazing site (WG) and a heavily grazed site (HG). Site HG had consistent lowest RUEANPP and RUE based on total net primary productivity (RUENPP). RUEANPP is a relatively good proxy at sites UG79 and WG, but less reliable for site HG. Similarly, RUEANPP is good predictor of transpiration efficiency based on aboveground net primary productivity (TEANPP) at sites UG79 and WG but not for site HG. However, if total net primary productivity is considered, RUENPP is good predictor of transpiration efficiency based on total net primary productivity (TENPP) for all sites. Although our measurements indicate decreased plant transpiration and consequentially decreasing RUE under heavy grazing, productivity was relatively compensated for with a higher TE. This offset between RUE and TE was even enhanced under water limited conditions and more evident when belowground net primary productivity (BNNP) was included. These findings suggest that BNPP should be considered when studies fucus on WUE of more intensively used grasslands. The consideration of the whole plant perspective and "real" WUE would partially revise our picture of system performance and therefore might affect the discussion on the C-sequestration and resilience potential of ecosystems.

Primary production in the Delta: Then and now

USGS Publications Warehouse

Cloern, James E.; Robinson, April; Richey, Amy; Grenier, Letitia; Grossinger, Robin; Boyer, Katharyn E.; Burau, Jon; Canuel, Elizabeth A.; DeGeorge, John F.; Drexler, Judith Z.; Enright, Chris; Howe, Emily R.; Kneib, Ronald; Mueller-Solger, Anke; Naiman, Robert J.; Pinckney, James L.; Safran, Samuel M.; Schoellhamer, David H.; Simenstad, Charles A.

2016-01-01

To evaluate the role of restoration in the recovery of the Delta ecosystem, we need to have clear targets and performance measures that directly assess ecosystem function. Primary production is a crucial ecosystem process, which directly limits the quality and quantity of food available for secondary consumers such as invertebrates and fish. The Delta has a low rate of primary production, but it is unclear whether this was always the case. Recent analyses from the Historical Ecology Team and Delta Landscapes Project provide quantitative comparisons of the areal extent of 14 habitat types in the modern Delta versus the historical Delta (pre-1850). Here we describe an approach for using these metrics of land use change to: (1) produce the first quantitative estimates of how Delta primary production and the relative contributions from five different producer groups have been altered by large-scale drainage and conversion to agriculture; (2) convert these production estimates into a common currency so the contributions of each producer group reflect their food quality and efficiency of transfer to consumers; and (3) use simple models to discover how tidal exchange between marshes and open water influences primary production and its consumption. Application of this approach could inform Delta management in two ways. First, it would provide a quantitative estimate of how large-scale conversion to agriculture has altered the Delta's capacity to produce food for native biota. Second, it would provide restoration practitioners with a new approach—based on ecosystem function—to evaluate the success of restoration projects and gauge the trajectory of ecological recovery in the Delta region.

Primary healthcare provider knowledge, beliefs and clinic-based practices regarding alternative tobacco products and marijuana: a qualitative study.

PubMed

Bascombe, Ta Misha S; Scott, Kimberly N; Ballard, Denise; Smith, Samantha A; Thompson, Winifred; Berg, Carla J

2016-06-01

Use prevalence of alternative tobacco products and marijuana has increased dramatically. Unfortunately, clinical guidelines have focused on traditional cigarettes with limited attention regarding these emerging public health issues. Thus, it is critical to understand how healthcare professionals view this issue and are responding to it. This qualitative study explored knowledge, beliefs and clinic-based practices regarding traditional and alternative tobacco products (cigar-like products, smokeless tobacco, hookah, e-cigarettes) and marijuana among rural and urban Georgia primary healthcare providers. The sample comprised 20 healthcare providers in primary care settings located in the Atlanta Metropolitan area and rural southern Georgia who participated in semi-structured interviews. Results indicated a lack of knowledge about these products, with some believing that some products were less harmful than traditional cigarettes or that they may be effective in promoting cessation or harm reduction. Few reported explicitly assessing use of these various products in clinic. In addition, healthcare providers reported a need for empirical evidence to inform their clinical practice. Healthcare providers must systematically assess use of the range of tobacco products and marijuana. Evidence-based recommendations or information sources are needed to inform clinical practice and help providers navigate conversations with patients using or inquiring about these products. © The Author 2016. Published by Oxford University Press. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Actual and potential transpiration and carbon assimilation in an irrigated poplar plantation.

PubMed

Kim, Hyun-Seok; Oren, Ram; Hinckley, Thomas M

2008-04-01

We examined the tradeoffs between stand-level water use and carbon uptake that result when biomass production of trees in plantations is maximized by removing nutrient and water limitations. A Populus trichocarpa Torr. x P. deltoides Bartr. & Marsh. plantation was irrigated and received frequent additions of nutrients to optimize biomass production. Sap flux density was measured continuously over four of the six growing-season months, supplemented with periodic measurements of leaf gas exchange and water potential. Measurements of tree diameter and height were used to estimate leaf area and biomass production based on allometric relationships. Sap flux was converted to canopy conductance and analyzed with an empirical model to isolate the effects of water limitation. Actual and soil-water-unlimited potential CO(2) uptakes were estimated with a canopy conductance constrained carbon assimilation (4C-A) scheme, which couples actual or potential canopy conductance with vertical gradients of light distribution, leaf-level conductance, maximum Rubisco capacity and maximum electron transport. Net primary production (NPP) was about 43% of gross primary production (GPP); when estimated for individual trees, this ratio was independent of tree size. Based on the NPP/GPP ratio, we found that current irrigation reduced growth by about 18% compared with growth with no water limitation. To achieve maximum growth, however, would require 70% more water for transpiration, and would reduce water-use efficiency by 27%, from 1.57 to 1.15 g stem wood C kg(-1) water. Given the economic and social values of water, plantation managers appear to have optimized water use.

Seasonality constraints to livestock grazing intensity.

PubMed

Fetzel, Tamara; Havlik, Petr; Herrero, Mario; Erb, Karl-Heinz

2017-04-01

Increasing food production is essential to meet the future food demand of a growing world population. In light of pressing sustainability challenges such as climate change and the importance of the global livestock system for food security as well as GHG emissions, finding ways to increasing food production sustainably and without increasing competition for food crops is essential. Yet, many unknowns relate to livestock grazing, in particular grazing intensity, an essential variable to assess the sustainability of livestock systems. Here, we explore ecological limits to grazing intensity (GI; i.e. the fraction of net primary production consumed by grazing animals) by analysing the role of seasonality in natural grasslands. We estimate seasonal limitations to GI by combining monthly net primary production data and a map of global livestock distribution with assumptions on the length of nonfavourable periods that can be bridged by livestock (e.g. by browsing dead standing biomass, storage systems or biomass conservation). This allows us to derive a seasonality-limited potential GI, which we compare with the GI prevailing in 2000. We find that GI in 2000 lies below its potential on 39% of the total global natural grasslands, which has a potential for increasing biomass extraction of up to 181 MtC/yr. In contrast, on 61% of the area GI exceeds the potential, made possible by management. Mobilizing this potential could increase milk production by 5%, meat production by 4% or contribute to free up to 2.8 Mio km² of grassland area at the global scale if the numerous socio-ecological constraints can be overcome. We discuss socio-ecological trade-offs, which may reduce the estimated potential considerably and require the establishment of sound monitoring systems and an improved understanding of livestock system's role in the Earth system. © 2017 John Wiley & Sons Ltd.

Phenological Versus Meteorological Controls on Land-atmosphere Water and Carbon Fluxes

NASA Technical Reports Server (NTRS)

Puma, Michael J.; Koster, Randal D.; Cook, Benjamin I.

2013-01-01

Phenological dynamics and their related processes strongly constrain land-atmosphere interactions, but their relative importance vis-à-vis meteorological forcing within general circulation models (GCMs) is still uncertain. Using an off-line land surface model, we evaluate leaf area and meteorological controls on gross primary productivity, evapotranspiration, transpiration, and runoff at four North American sites, representing different vegetation types and background climates. Our results demonstrate that compared to meteorological controls, variation in leaf area has a dominant control on gross primary productivity, a comparable but smaller influence on transpiration, a weak influence on total evapotranspiration, and a negligible impact on runoff. Climate regime and characteristic variations in leaf area have important modulating effects on these relative controls, which vary depending on the fluxes and timescales of interest. We find that leaf area in energylimited evaporative regimes tends to exhibit greater control on annual gross primary productivity than in moisture-limited regimes, except when vegetation exhibits little interannual variation in leaf area. For transpiration, leaf area control is somewhat less in energylimited regimes and greater in moisture-limited regimes for maximum pentad and annual fluxes. These modulating effects of climate and leaf area were less clear for other fluxes and at other timescales. Our findings are relevant to land-atmosphere coupling in GCMs, especially considering that leaf area variations are a fundamental element of land use and land cover change simulations.

Changes in Nutrients and Primary Production in Barrow Tundra Ponds Over the Past 40 Years

NASA Astrophysics Data System (ADS)

Lougheed, V.; Andresen, C.; Hernandez, C.; Miller, N.; Reyes, F.

2012-12-01

The Arctic tundra ponds at the International Biological Program (IBP) site in Barrow, Alaska were studied extensively in the 1970's; however, very little research has occurred there since that time. Due to the sensitivity of this region to climate warming, understanding any changes in the ponds' structure and function over the past 40 years can help identify any potential climate-related impacts. The goal of this study was to determine if the structure and function of primary producers had changed through time, and the association between these changes, urban encroachment and nutrient limitation. Nutrient levels, as well as the biomass of aquatic graminoids (Carex aquatilis and Arctophila fulva), phytoplankton and periphyton were determined in the IBP tundra ponds in both 1971-3 and 2010-12, and in 2010-11 from nearby ponds along an anthropogenic disturbance gradient. Uptake of 14C was also used to measure algal primary production in both time periods and nutrient addition experiments were performed to identify the nutrients limiting algal growth. Similar methods were utilized in the past and present studies. Overall, biomass of graminoids, phytoplankton and periphyton was greater in 2010-12 than that observed in the 1970s. This increased biomass was coincident with warmer water temperatures, increased water column nutrients and deeper active layer depth. Biomass of plants and algae was highest in the ponds closest to the village of Barrow, but no effect of urban encroachment was observed at the IBP ponds. Laboratory incubations indicated that nutrient release from thawing permafrost can explain part of these increases in nutrients and has likely contributed to changes in the primary limiting nutrient. Further studies are necessary to better understand the implications of these trends in primary production to nutrient budgets in the Arctic. The Barrow IBP tundra ponds represent one of the very few locations in the Arctic where long-term data are available on freshwater ecosystem structure and function. Continued monitoring and protection of these invaluable sites is required to help understand the implications of climate change on Arctic freshwater ecosystems.

Controls of primary production in two phytoplankton blooms in the Antarctic Circumpolar Current

NASA Astrophysics Data System (ADS)

Hoppe, C. J. M.; Klaas, C.; Ossebaar, S.; Soppa, M. A.; Cheah, W.; Laglera, L. M.; Santos-Echeandia, J.; Rost, B.; Wolf-Gladrow, D. A.; Bracher, A.; Hoppema, M.; Strass, V.; Trimborn, S.

2017-04-01

The Antarctic Circumpolar Current has a high potential for primary production and carbon sequestration through the biological pump. In the current study, two large-scale blooms observed in 2012 during a cruise with R.V. Polarstern were investigated with respect to phytoplankton standing stocks, primary productivity and nutrient budgets. While net primary productivity was similar in both blooms, chlorophyll a -specific photosynthesis was more efficient in the bloom closer to the island of South Georgia (39 °W, 50 °S) compared to the open ocean bloom further east (12 °W, 51 °S). We did not find evidence for light being the driver of bloom dynamics as chlorophyll standing stocks up to 165 mg m-2 developed despite mixed layers as deep as 90 m. Since the two bloom regions differ in their distance to shelf areas, potential sources of iron vary. Nutrient (nitrate, phosphate, silicate) deficits were similar in both areas despite different bloom ages, but their ratios indicated more pronounced iron limitation at 12 °W compared to 39 °W. While primarily the supply of iron and not the availability of light seemed to control onset and duration of the blooms, higher grazing pressure could have exerted a stronger control toward the declining phase of the blooms.

Contribution by Macroalgal Mats to Primary Production of a Shallow Embayment Under High and Low Nitrogen-loading Rates

NASA Astrophysics Data System (ADS)

Peckol, P.; Rivers, J. S.

1996-09-01

The limits on primary production in areas undergoing eutrophication may be set by indirect effects of nitrogen loading, i.e. decreasing irradiances, associated with proliferating opportunistic algae. Using in situphoton flux density (PFD) availability estimates within unattached algal mats and photosynthetic parameters determined from photosynthesis vs.irradiance (P vs.I) curves generated for the dominant components of mat assemblages, Cladophora vagabundaand Gracilaria tikvahiae, seasonal net mat production rate for estuaries (Waquoit Bay, Massachusetts, U.S.A.) receiving high (Childs River) and low (Sage Lot Pond) N-loading rates were determined. Although abundance of C. vagabundawas 2× greater than G. tikvahiae, the former species contributed only about 50% of total mat productivity, due largely to rapid light attenuation within the dense algal mat. While mat production was low and similar at both sides during winter (≈0·35 g C m -2 day -1), for other seasons, the net mat daytime productivity at Childs River, the N-loaded site, was 2·5× higher than rates determined for Sage Lot Pond. Although annual net daytime production at Childs River (1094 g C m -2 year -1) was comparable to estimates for other algal mat assemblages in eutrophic systems, primary production of the Waquoit Bay system was found to become self-limiting as available PFD controls maximum productivity. In photosynthetically inactive portions of the algal mat, carbon release was estimated from tissue-loss measurements at 0·14 g C m -2 day -1for C. vagabundaand 0·05 g C m -2 day -1for G. tikvahiae. Annual in situC release of 73 g C m -2is ≈20% of annual net mat production (fixed carbon not respired by algae) in this embayment. Although both estuaries showed net autotrophy year round (Pg:R>1), the high metabolic cost of a large, inactive mat resulted in lower Pg:R ratios at Childs Rivers than at Sage Lot Pond, particularly during the summer period of peak production. Thus, it is predicted that the Waquoit Bay system will experience an overall decline in Pg:R ratios and consequent increase in anoxic events as eutrophication continues.

A landscape-scale assessment of above- and belowground primary production in coastal wetlands: Implications for climate change-induced community shifts

USGS Publications Warehouse

Stagg, Camille L.; Schoolmaster, Donald R.; Piazza, Sarai C.; Snedden, Gregg; Steyer, Gregory D.; Fischenich, Craig J; McComas, Robert W.

2017-01-01

Above- and belowground production in coastal wetlands are important contributors to carbon accumulation and ecosystem sustainability. As sea level rises, we can expect shifts to more salt-tolerant communities, which may alter these ecosystem functions and services. Although the direct influence of salinity on species-level primary production has been documented, we lack an understanding of the landscape-level response of coastal wetlands to increasing salinity. What are the indirect effects of sea-level rise, i.e., how does primary production vary across a landscape gradient of increasing salinity that incorporates changes in wetland type? This is the first study to measure both above- and belowground production in four wetland types that span an entire coastal gradient from fresh to saline wetlands. We hypothesized that increasing salinity would limit rates of primary production, and saline marshes would have lower rates of above- and belowground production than fresher marshes. However, along the Northern Gulf of Mexico Coast in Louisiana, USA, we found that aboveground production was highest in brackish marshes, compared with fresh, intermediate, and saline marshes, and belowground production was similar among all wetland types along the salinity gradient. Multiple regression analysis indicated that salinity was the only significant predictor of production, and its influence was dependent upon wetland type. We concluded that (1) salinity had a negative effect on production within wetland type, and this relationship was strongest in the fresh marsh (0–2 PSU) and (2) along the overall landscape gradient, production was maintained by mechanisms at the scale of wetland type, which were likely related to plant energetics. Regardless of wetland type, we found that belowground production was significantly greater than aboveground production. Additionally, inter-annual variation, associated with severe drought conditions, was observed exclusively for belowground production, which may be a more sensitive indicator of ecosystem health than aboveground production.

An empirical model of the phytoplankton chlorophyll : carbon ratio-the conversion factor between productivity and growth rate

USGS Publications Warehouse

Cloern, James E.; Grenz, Christian; Vidergar-Lucas, Lisa

1995-01-01

We present an empirical model that describes the ratio of phytoplankton chlorophyll a to carbon, Chl: C, as a function of temperature, daily irradiance, and nutrient-limited growth rate. Our model is based on 219 published measurements of algal cultures exposed to light-limited or nutrient-limited growth conditions. We illustrate an approach for using this estimator of Chl: C to calculate phytoplankton population growth rate from measured primary productivity. This adaptive Chl: C model gives rise to interactive light-nutrient effects in which growth efficiency increases with nutrient availability under low-light conditions. One implication of this interaction is the enhancement of phytoplankton growth efficiency, in addition to enhancement of biomass yield, as a response to eutrophication.

Scale-up and economic analysis of biodiesel production from municipal primary sewage sludge.

PubMed

Olkiewicz, Magdalena; Torres, Carmen M; Jiménez, Laureano; Font, Josep; Bengoa, Christophe

2016-08-01

Municipal wastewater sludge is a promising lipid feedstock for biodiesel production, but the need to eliminate the high water content before lipid extraction is the main limitation for scaling up. This study evaluates the economic feasibility of biodiesel production directly from liquid primary sludge based on experimental data at laboratory scale. Computational tools were used for the modelling of the process scale-up and the different configurations of lipid extraction to optimise this step, as it is the most expensive. The operational variables with a major influence in the cost were the extraction time and the amount of solvent. The optimised extraction process had a break-even price of biodiesel of 1232 $/t, being economically competitive with the current cost of fossil diesel. The proposed biodiesel production process from waste sludge eliminates the expensive step of sludge drying, lowering the biodiesel price. Copyright © 2016 Elsevier Ltd. All rights reserved.

Seasonal variability of light availability and utilization in the Sargasso Sea

NASA Technical Reports Server (NTRS)

Siegel, David A.; Michaels, Anthony F.; Sorensen, Jens C.; O'Brein, Margaret C.; Hammer, Melodie A.

1995-01-01

A 2 year time series of optical, biogeochemical, and physical parameters, taken near the island of Bermuda, is used to evaluate the sources of temporal variability in light avaliability and utilization in the Sargasso Sea. Integrated assessments of light availability are made by examining the depth of constant percent incident photosynthetically available radiation (% PAR) isolumes. To first order, changes in the depth %PAR isolumes were caused by physical processes: deep convection mixing in the winter which led to the spring bloom and concurrent shallowing of %PAR depths and the occurrence of anomalous thermohaline water masses during the summer and fall seasons. Spectral light availability variations are assessed using determinations of diffuse attenuation coefficient spectra which illustrates a significant seasonal cycle in colored detrital particulate and/or dissolved materials that is unrelated to changes in chlorophyll pigment concentrations. Temporal variations in the photosynthetic light utilization index Psi are used to assess vertically intergrated light utilization variations. Values of Psi are highly variable and show no apparent seasonal pattern which indicates that Psi is not simply a 'biogeochemical constant.' Determinations of in situ primary production rates and daily mean PAR fluxes are used to diagnose the relative role of light limitation in determining vertically integrated rates of primary production integral PP. The mean depth of the light-saturated zone (the vertical region where the daily mean PAR flux was greater than or equal to the saturation irradiance) is only approximately 40 m, although more than one half of interal PP occurred within this zone. Production model results illustrate that accurate predictions of integral PP are dependent upon rates of light-saturated production rather than upon indices of light limitation. It seems unlikely that significant improvements in simple primary production models will come from the partitioning of the Earth's seas into biogeochemical provinces.

Recent Warming, Rather than Industrial Emissions of Bioavailable Nutrients, Is the Dominant Driver of Lake Primary Production Shifts across the Athabasca Oil Sands Region

PubMed Central

Summers, Jamie C.; Kurek, Joshua; Kirk, Jane L.; Muir, Derek C. G.; Wang, Xiaowa; Wiklund, Johan A.; Cooke, Colin A.; Evans, Marlene S.; Smol, John P.

2016-01-01

Freshwaters in the Athabasca Oil Sands Region (AOSR) are vulnerable to the atmospheric emissions and land disturbances caused by the local oil sands industry; however, they are also affected by climate change. Recent observations of increases in aquatic primary production near the main development area have prompted questions about the principal drivers of these limnological changes. Is the enhanced primary production due to deposition of nutrients (nitrogen and phosphorus) from local industry or from recent climatic changes? Here, we use downcore, spectrally-inferred chlorophyll-a (VRS-chla) profiles (including diagenetic products) from 23 limnologically-diverse lakes with undisturbed catchments to characterize the pattern of primary production increases in the AOSR. Our aim is to better understand the relative roles of the local oil sands industry versus climate change in driving aquatic primary production trends. Nutrient deposition maps, generated using geostatistical interpolations of spring-time snowpack measurements from a grid pattern across the AOSR, demonstrate patterns of elevated total phosphorus, total nitrogen, and bioavailable nitrogen deposition around the main area of industrial activity. However, this pattern is not observed for bioavailable phosphorus. Our paleolimnological findings demonstrate consistently greater VRS-chla concentrations compared to pre-oil sands development levels, regardless of morphological and limnological characteristics, landscape position, bioavailable nutrient deposition, and dibenzothiophene (DBT)-inferred industrial impacts. Furthermore, breakpoint analyses on VRS-chla concentrations across a gradient of DBT-inferred industrial impact show limited evidence of a contemporaneous change among lakes. Despite the contribution of bioavailable nitrogen to the landscape from industrial activities, we find no consistency in the spatial pattern and timing of VRS-chla shifts with an industrial fertilizing signal. Instead, significant positive correlations were observed between VRS-chla and annual and seasonal temperatures. Our findings suggest warmer air temperatures and likely decreased ice covers are important drivers of enhanced aquatic primary production across the AOSR. PMID:27135946

Binary optics: Trends and limitations

NASA Technical Reports Server (NTRS)

Farn, Michael W.; Veldkamp, Wilfrid B.

1993-01-01

We describe the current state of binary optics, addressing both the technology and the industry (i.e., marketplace). With respect to the technology, the two dominant aspects are optical design methods and fabrication capabilities, with the optical design problem being limited by human innovation in the search for new applications and the fabrication issue being limited by the availability of resources required to improve fabrication capabilities. With respect to the industry, the current marketplace does not favor binary optics as a separate product line and so we expect that companies whose primary purpose is the production of binary optics will not represent the bulk of binary optics production. Rather, binary optics' more natural role is as an enabling technology - a technology which will directly result in a competitive advantage in a company's other business areas - and so we expect that the majority of binary optics will be produced for internal use.

Annual primary production: Patterns and mechanisms of change in a nutrient-rich tidal ecosystem

USGS Publications Warehouse

Jassby, Alan D.; Cloern, James E.; Cole, B.E.

2002-01-01

Although nutrient supply often underlies long-term changes in aquatic primary production, other regulatory processes can be important. The Sacramento-San Joaquin River Delta, a complex of tidal waterways forming the landward portion of the San Francisco Estuary, has ample nutrient supplies, enabling us to examine alternate regulatory mechanisms over a 21-yr period. Delta-wide primary productivity was reconstructed from historical water quality data for 1975–1995. Annual primary production averaged 70 g C m−2, but it varied by over a factor of five among years. At least four processes contributed to this variability: (1) invasion of the clam Potamocorbula amurensis led to a persistent decrease in phytoplankton biomass (chlorophyll a) after 1986; (2) a long-term decline in total suspended solids—probably at least partly because of upstream dam construction—increased water transparency and phytoplankton growth rate; (3) river inflow, reflecting climate variability, affected biomass through fluctuations in flushing and growth rates through fluctuations in total suspended solids; and (4) an additional pathway manifesting as a long-term decline in winter phytoplankton biomass has been identified, but its genesis is uncertain. Overall, the Delta lost 43% in annual primary production during the period. Given the evidence for food limitation of primary consumers, these findings provide a partial explanation for widespread Delta species declines over the past few decades. Turbid nutrient-rich systems such as the Delta may be inherently more variable than other tidal systems because certain compensatory processes are absent. Comparisons among systems, however, can be tenuous because conclusions about the magnitude and mechanisms of variability are dependent on length of data record.  

40 CFR 421.332 - Effluent limitations guidelines representing the degree of effluent reduction attainable by the...

Code of Federal Regulations, 2013 CFR

2013-07-01

... times. (d) SiCl4 purification wet air pollution control. BPT Limitations for the Primary Zirconium and....600 307.600 pH (1) (1) 1 Within the range of 7.5 to 10.0 at all times. (q) Leaching rinse water from... Within the range of 7.5 to 10.0. (r) Leaching rinse water from zirconium alloy production. BPT...

40 CFR 421.332 - Effluent limitations guidelines representing the degree of effluent reduction attainable by the...

Code of Federal Regulations, 2011 CFR

2011-07-01

... times. (d) SiCl4 purification wet air pollution control. BPT Limitations for the Primary Zirconium and....600 307.600 pH (1) (1) 1 Within the range of 7.5 to 10.0 at all times. (q) Leaching rinse water from... Within the range of 7.5 to 10.0. (r) Leaching rinse water from zirconium alloy production. BPT...

40 CFR 421.332 - Effluent limitations guidelines representing the degree of effluent reduction attainable by the...

Code of Federal Regulations, 2012 CFR

2012-07-01

... times. (d) SiCl4 purification wet air pollution control. BPT Limitations for the Primary Zirconium and....600 307.600 pH (1) (1) 1 Within the range of 7.5 to 10.0 at all times. (q) Leaching rinse water from... Within the range of 7.5 to 10.0. (r) Leaching rinse water from zirconium alloy production. BPT...

40 CFR 421.332 - Effluent limitations guidelines representing the degree of effluent reduction attainable by the...

Code of Federal Regulations, 2014 CFR

2014-07-01

... times. (d) SiCl4 purification wet air pollution control. BPT Limitations for the Primary Zirconium and....600 307.600 pH (1) (1) 1 Within the range of 7.5 to 10.0 at all times. (q) Leaching rinse water from... Within the range of 7.5 to 10.0. (r) Leaching rinse water from zirconium alloy production. BPT...

40 CFR 421.332 - Effluent limitations guidelines representing the degree of effluent reduction attainable by the...

Code of Federal Regulations, 2010 CFR

2010-07-01

... times. (d) SiCl4 purification wet air pollution control. BPT Limitations for the Primary Zirconium and....600 307.600 pH (1) (1) 1 Within the range of 7.5 to 10.0 at all times. (q) Leaching rinse water from... Within the range of 7.5 to 10.0. (r) Leaching rinse water from zirconium alloy production. BPT...

Beneath the surface: Characteristics of oceanic ecosystems under weak mixing conditions A theoretical investigation

NASA Astrophysics Data System (ADS)

Beckmann, Aike; Hense, Inga

2007-12-01

This study considers an important biome in aquatic environments, the subsurface ecosystem that evolves under low mixing conditions, from a theoretical point of view. Employing a conceptual model that involves phytoplankton, a limiting nutrient and sinking detritus, we use a set of key characteristics (thickness, depth, biomass amplitude/productivity) to qualitatively and quantitatively describe subsurface biomass maximum layers (SBMLs) of phytoplankton. These SBMLs are defined by the existence of two community compensation depths in the water column, which confine the layer of net community production; their depth coincides with the upper nutricline. Analysing the results of a large ensemble of simulations with a one-dimensional numerical model, we explore the parameter dependencies to obtain fundamental steady-state relationships that connect primary production, mortality and grazing, remineralization, vertical diffusion and detrital sinking. As a main result, we find that we can distinguish between factors that determine the vertically integrated primary production and others that affect only depth and shape (thickness and biomass amplitude) of this subsurface production layer. A simple relationship is derived analytically, which can be used to estimate the steady-state primary productivity in the subsurface oligotrophic ocean. The fundamental nature of the results provides further insight into the dynamics of these “hidden” ecosystems and their role in marine nutrient cycling.

Limits to the Positive Effect of Ocean Acidification on Macroalgal Primary Production, Interactions with Light and Temperature

NASA Astrophysics Data System (ADS)

Kubler, J.; Dudgeon, S. R.; Nisumaa, A. M.

2016-02-01

About one third of macroalgal species lack any carbon concentrating mechanism (CCM), which prevents carbon limitation under air equilibrium in other seaweed species. It is predicted that those species lacking CCM's will benefit from ongoing ocean acidification in terms of primary productivity and growth. The absolute sizes and pattern of those benefits are not known. Here, we compare the results of a model based on composite data from the literature, with a growth experiment using Plocamium cartilagineum, a broadly distributed rhodophyte species lacking a carbon concentrating mechanism and hypothesized to be carbon limited under current conditions. We grew P. cartilagineum, at 15 and 20°C in seawater aerated with a total of 53 different pCO2s (from 344 to 1053µatm), in 8 multiweek trials over 12 months. We measured growth and photosynthetic rates. A linear mixed model analysis was used to partition the effect sizes of drivers of variation in the experiment. The growth rates and maximum photosynthetic rates responded nonlinearly to OA, increasing with elevated pCO2 from recent atmospheric level to up 450µatm and decreasing at higher pCO2. Light harvesting efficiency was unaffected by pCO2 and inversely related to temperature. We were able to compare the results of the growth experiment directly to the model based on the additive effects of temperature and pCO2 on photosynthetic rates, finding concordance of the pattern of response. The size of the effect of pCO2 on growth rate in the experiment was greater than the effect predicted by the model for net primary productivity. These results predict that the benefit of OA for macroalgal growth may disappear as ocean acidification continues through this century.

Nitrogen addition increases fecundity in the desert shrub Sarcobatus vermiculatus.

PubMed

Drenovsky, R E; Richards, J H

2005-04-01

Nutrients, in addition to water, limit desert primary productivity, but nutrient limitations to fecundity and seed quality in desert ecosystems have received little attention. Reduced seed production and quality may affect recruitment, population, and community processes. At the Mono Basin, CA, USA where the alkaline, sandy soil has very low availability of N, P, and most other nutrients, seed production, recruitment, and dominance of the desert shrub Sarcobatus vermiculatus decrease over a dune successional sequence. Concurrently, Sarcobatus leaf N, P, and Ca/Mg ratio decline from early to later successional dunes. At two later successional dune sites, we fertilized adult Sarcobatus shrubs for 2 years and determined which nutrient(s) limited growth, seed production, and seed quality. We also tested whether nutrient addition at these older sites made these fitness-related variables equivalent to a younger, high-fecundity site. Nitrogen addition, alone, increased Sarcobatus leaf N, growth, and seed production per shoot module. Any treatment including P, Ca, Mg, or micronutrients but not N had an insignificant effect on growth and fecundity. Nitrogen addition also increased filled seed weight, a predictor of potential seedling survival, at one of the sites. Nitrogen-limited seed production and seed mass may reduce Sarcobatus fitness and contribute to the observed successional changes in plant community composition in this alkaline desert ecosystem.

The National Shipbuilding Research Program. Build Strategy Development

DTIC Science & Technology

1994-02-01

technologies to the product mix and marketing strategies. In a general sense, the most productive yards have identified market niches, developed suitable...CAPABILITIES AND LIMITATIONS QUESTIONNAIRE U.S. SHIPYARD RESPONSE YES NO Does your Company have a Marketing /Sales Department? 2 1 Does your Company...engage in Market Research? 2 1 Domestic Foreign What is your current primary market ? Military 2 1 Commercial Ocean Going 1 Commercial Off shore Commercial

U.S. Hardwood Product Exports to Canada and a Look at U.S. Hardwood Resources

Treesearch

Philip A. Araman

1998-01-01

Canada became the largest market for primary product hardwood exports in 1987 after slipping to No. 3 in 1986. Preferences for fine hardwoods and limited Canadian supplies of species such as oak should assure continued strong demands for U.S. hardwoods. Another reason for continued strong demand is that some Canadian firms process U.S. lumber and logs for export. This...

Microbial community dynamics and taxon-specific phytoplankton production in the Arabian Sea during the 1995 monsoon seasons

NASA Astrophysics Data System (ADS)

Brown, S. L.; Landry, M. R.; Christensen, S.; Garrison, D.; Gowing, M. M.; Bidigare, R. R.; Campbell, L.

As part of the US JGOFS Arabian Sea Process Study in 1995, we investigated temporal and spatial patterns in microbial dynamics and production during the late Southwest (SW) Monsoon (August-September 1995) and the early Northeast (NE) Monsoon (November-December 1995) seasons using the seawater-dilution technique. Experiments were coupled with population assessments from high-performance liquid chromatography, flow cytometry, and microscopy to estimate further taxon-specific phytoplankton growth, grazing and production. Dilution estimates of total primary production varied substantially, from 7 to 423 μg C l -1 d -1, and were generally in good agreement with rate estimates from 14C-uptake incubations. Both primary production and secondary bacterial production were, on average, 2.5× higher during the SW Monsoon than the NE Monsoon. Relative to the total community, photosynthetic prokaryotes contributed 23% and 53% of production during the SW and NE Monsoons, respectively. Prochlorococcus spp. production was well balanced by grazing losses, while >50% of Synechococcus spp. production during the SW Monsoon appeared to escape grazing by protists. Diatoms comprised >30% of primary production at a high biomass station during the SW Monsoon but <30% at all stations during the NE Monsoon. Growth rates of Synechococcus spp. and diatoms appeared to be limited by inorganic nitrogen concentrations, while Prochlorococcus spp., dinoflagellates and Phaeocystis spp. were not. Losses to protistan grazing were strongly correlated with phytoplankton biomass and production. Despite sufficient prey levels, protistan biomass was modest and constant across the region during both seasons. Of the larger taxa, diatoms were grazed the least effectively with only 50% of daily production accounted for by protistan grazing. Combined estimates of protistan and mesozooplankton grazing at upwelling stations during the SW Monsoon leave ˜10% of primary production unaccounted for and available for sinking and/or lateral advection. Similarly high rates of net production at northern coastal stations during the NE Monsoon suggest that this area also may contribute to regional export flux.

Differential expression of liver and kidney proteins in a mouse model for primary hyperoxaluria type I.

PubMed

Hernández-Fernaud, Juan R; Salido, Eduardo

2010-11-01

Mutations in the alanine-glyoxylate aminotransferase gene (AGXT) are responsible for primary hyperoxaluria type I, a rare disease characterized by excessive hepatic oxalate production that leads to renal failure. A deeper understanding of the changes in the metabolic pathways secondary to the lack of AGXT expression is needed in order to explore substrate depletion as a therapeutic strategy to limit oxalate production in primary hyperoxaluria type I. We have developed an Agxt knockout (AgxtKO) mouse that reproduces some key features of primary hyperoxaluria type I. To improve our understanding of the metabolic adjustments subsequent to AGXT deficiency, we performed a proteomic analysis of the changes in expression levels of various subcellular fractions of liver and kidney metabolism linked to the lack of AGXT. In this article, we report specific changes in the liver and kidney proteome of AgxtKO mice that point to significant variations in gluconeogenesis, glycolysis and fatty acid pathways. Journal compilation © 2010 FEBS. No claim to original German government works.

Defoliation effects on pasture photosynthesis and respiration

USDA-ARS?s Scientific Manuscript database

Ecosystem C gain or loss from managed grasslands can depend on the type and intensity of management practices that are employed. However, limited information is available at the field scale on how the type of defoliation, specifically grazing vs. cutting, affects gross primary productivity (GPP) an...

High concentration agglomerate dynamics at high temperatures.

PubMed

Heine, M C; Pratsinis, S E

2006-11-21

The dynamics of agglomerate aerosols are investigated at high solids concentrations that are typical in industrial scale manufacture of fine particles (precursor mole fraction larger than 10 mol %). In particular, formation and growth of fumed silica at such concentrations by chemical reaction, coagulation, and sintering is simulated at nonisothermal conditions and compared to limited experimental data and commercial product specifications. Using recent chemical kinetics for silica formation by SiCl4 hydrolysis and neglecting aerosol polydispersity, the evolution of the diameter of primary particles (specific surface area, SSA), hard- and soft-agglomerates, along with agglomerate effective volume fraction (volume occupied by agglomerate) is investigated. Classic Smoluchowski theory is fundamentally limited for description of soft-agglomerate Brownian coagulation at high solids concentrations. In fact, these high concentrations affect little the primary particle diameter (or SSA) but dominate the soft-agglomerate diameter, structure, and volume fraction, leading to gelation consistent with experimental data. This indicates that restructuring and fragmentation should affect product particle characteristics during high-temperature synthesis of nanostructured particles at high concentrations in aerosol flow reactors.

A theoretical study of concentration of profiles of primary cytochemical-enzyme reaction products in membrane-bound cell organelles and its application to lysosomal acid phosphatase.

PubMed

Cornelisse, C J; Hermens, W T; Joe, M T; Duijndam, W A; van Duijn, P

1976-11-01

A numerical method was developed for computing the steady-state concentration gradient of a diffusible enzyme reaction product in a membrane-limited compartment of a simplified theoretical cell model. In cytochemical enzyme reactions proceeding according to the metal-capture principle, the local concentration of the primary reaction product is an important factor in the onset of the precipitation process and in the distribution of the final reaction product. The following variables were incorporated into the model: enzyme activity, substrate concentration, Km, diffusion coefficient of substrate and product, particle radius and cell radius. The method was applied to lysosomal acid phosphatase. Numerical values for the variables were estimated from experimental data in the literature. The results show that the calculated phosphate concentrations inside lysosomes are several orders of magnitude lower than the critical concentrations for efficient phosphate capture found in a previous experimental model study. Reasons for this apparent discrepancy are discussed.

Late Pleistocene-Holocene phytoplankton productivity in the Gulf of Alaska, IODP Site U1419

NASA Astrophysics Data System (ADS)

LeVay, L. J.; Romero, O. E.; McClymont, E.; Müller, J.; Penkrot, M. L.; Jaeger, J. M.; Mix, A.; Walczak, M.

2016-12-01

The modern Gulf of Alaska (GoA) is a high-nutrient, low-chlorophyll region that is iron-limited; however, the coastal region of Alaska is macronutrient-limited. Vertical mixing of these shallow coastal and deep basinal waters produce high seasonal productivity across the shelf. Previous studies on the Alaskan shelf showed that productivity varied across the Pleistocene-Holocene transition, likely related to climate and sea level change that brought nutrients from estuaries into the Gulf. Here we explore an extended record through the Late Pleistocene-Holocene to reconstruct the productivity of phytoplankton groups in the GoA and to understand the impact of glacial/interglacial climates on primary production and nutrient availability near the shelf. International Ocean Discovery Program (IODP) Site U1419 was cored during Expedition 341 on the upper continental slope in the GoA. A high-resolution sedimentary sequence was recovered that records Late Pleistocene-Holocene glacial and paleoceanographic dynamics. Both calcareous nannoplankton and diatoms are well-represented at Site U1419. Very few studies have explored the competition of these two phytoplankton groups in the geologic record. Because calcareous nannoplankton and diatoms favor differing nutrient conditions, changes in their abundance can aid in reconstructing shifts in primary productivity as well as the causes, such as stratification or nutrient limitation. We present a multi-proxy record, including the group and species abundance of diatoms and calcareous nannoplankton, biogenic bulk components content, alkenone-based sea surface temperatures, and XRF core scanning elemental composition, which is used to interpret fluctuations in phytoplankton and identify the underlying causes. Initial results show the group abundance of nannoplankton and diatoms fluctuates greatly and appears to covary. Calcareous nannoplankton abundance increases with sea surface temperature and is related to higher alkenone concentrations in the sediments. The occurrence of diatoms is sporadic and could be linked to silica-limitation in surface waters. These findings will provide new insights into the processes governing fossil phytoplankton interactions and how this affects production and carbon cycling on the shelf.

Quantitative food web analysis supports the energy-limitation hypothesis in cave stream ecosystems.

PubMed

Venarsky, Michael P; Huntsman, Brock M; Huryn, Alexander D; Benstead, Jonathan P; Kuhajda, Bernard R

2014-11-01

Energy limitation has long been the primary assumption underlying conceptual models of evolutionary and ecological processes in cave ecosystems. However, the prediction that cave communities are actually energy-limited in the sense that constituent populations are consuming all or most of their resource supply is untested. We assessed the energy-limitation hypothesis in three cave streams in northeastern Alabama (USA) by combining measurements of animal production, demand, and resource supplies (detritus, primarily decomposing wood particles). Comparisons of animal consumption and detritus supply rates in each cave showed that all, or nearly all, available detritus was required to support macroinvertebrate production. Furthermore, only a small amount of macroinvertebrate prey production remained to support other predatory taxa (i.e., cave fish and salamanders) after accounting for crayfish consumption. Placing the energy demands of a cave community within the context of resource supply rates provided quantitative support for the energy-limitation hypothesis, confirming the mechanism (limited energy surpluses) that likely influences the evolutionary processes and population dynamics that shape cave communities. Detritus-based surface ecosystems often have large detrital surpluses. Thus, cave ecosystems, which show minimal surpluses, occupy the extreme oligotrophic end of the spectrum of detritus-based food webs.

A Mathematical Model for Estimation of Kelp Bed Productivity: Age Dependence and Contributions of Subsurface Kelp

NASA Astrophysics Data System (ADS)

Trumbo, S. K.; Palacios, S. L.; Zimmerman, R. C.; Kudela, R. M.

2012-12-01

Macrocystis pyrifera, giant kelp, is a major primary producer of the California coastal ocean that provides habitat for marine species through the formation of massive kelp beds. The estimation of primary productivity of these kelp beds is essential for a complete understanding of their health and of the biogeochemistry of the region. Current methods involve either the application of a proportionality constant to remotely sensed biomass or in situ frond density measurements. The purpose of this research was to improve upon conventional primary productivity estimates by developing a model which takes into account the spectral differences among juvenile, mature, and senescent tissues as well as the photosynthetic contributions of subsurface kelp. A modified version of a seagrass productivity model (Zimmerman 2006) was used to quantify carbon fixation. Inputs included estimates of the underwater light field as computed by solving the radiative transfer equation (with the Hydrolight(TM) software package) and biological parameters obtained from the literature. It was found that mature kelp is the most efficient primary producer, especially in light-limited environments, due to increased light absorptance. It was also found that incoming light attenuates below useful levels for photosynthesis more rapidly than has been previously accounted for in productivity estimates, with productivity dropping below half maximum at approximately 0.75 m. As a case study for comparison with the biomass method, the model was applied to Isla Vista kelp bed in Santa Barbara, using area estimates from the MODIS-ASTER Simulator (MASTER). A graphical user-interface was developed for users to provide inputs to run the kelp productivity model under varying conditions. Accurately quantifying kelp productivity is essential for understanding its interaction with offshore ecosystems as well as its contribution to the coastal carbon cycle.

Hydrologic resilience and Amazon productivity.

PubMed

Ahlström, Anders; Canadell, Josep G; Schurgers, Guy; Wu, Minchao; Berry, Joseph A; Guan, Kaiyu; Jackson, Robert B

2017-08-30

The Amazon rainforest is disproportionately important for global carbon storage and biodiversity. The system couples the atmosphere and land, with moist forest that depends on convection to sustain gross primary productivity and growth. Earth system models that estimate future climate and vegetation show little agreement in Amazon simulations. Here we show that biases in internally generated climate, primarily precipitation, explain most of the uncertainty in Earth system model results; models, empirical data and theory converge when precipitation biases are accounted for. Gross primary productivity, above-ground biomass and tree cover align on a hydrological relationship with a breakpoint at ~2000 mm annual precipitation, where the system transitions between water and radiation limitation of evapotranspiration. The breakpoint appears to be fairly stable in the future, suggesting resilience of the Amazon to climate change. Changes in precipitation and land use are therefore more likely to govern biomass and vegetation structure in Amazonia.Earth system model simulations of future climate in the Amazon show little agreement. Here, the authors show that biases in internally generated climate explain most of this uncertainty and that the balance between water-saturated and water-limited evapotranspiration controls the Amazon resilience to climate change.

ECO-FRIENDLY GOLF TEES FILLED WITH CORN-BASED DDGS

EPA Science Inventory

The ethanol industry in the United States currently produces approximately 10,000,000 tons of corn processing co-products, namely distillers dried grains with solubles (DDGS). The primary use of DDGS to date has been in animal feed applications. However, there are limits to th...

Global-scale carbon and energy flows through the marine planktonic food web: An analysis with a coupled physical-biological model

NASA Astrophysics Data System (ADS)

Stock, Charles A.; Dunne, John P.; John, Jasmin G.

2014-01-01

Global-scale planktonic ecosystem models exhibit large differences in simulated net primary production (NPP) and assessment of planktonic food web fluxes beyond primary producers has been limited, diminishing confidence in carbon flux estimates from these models. In this study, a global ocean-ice-ecosystem model was assessed against a suite of observation-based planktonic food web flux estimates, many of which were not considered in previous modeling studies. The simulation successfully captured cross-biome differences and similarities in these fluxes after calibration of a limited number of highly uncertain yet influential parameters. The resulting comprehensive carbon budgets suggested that shortened food webs, elevated growth efficiencies, and tight consumer-resource coupling enable oceanic upwelling systems to support 45% of pelagic mesozooplankton production despite accounting for only 22% of ocean area and 34% of NPP. In seasonally stratified regions (42% of ocean area and 40% of NPP), weakened consumer-resource coupling tempers mesozooplankton production to 41% and enhances export below 100 m to 48% of the global total. In oligotrophic systems (36% of ocean area and 26% of NPP), the dominance of small phytoplankton and low consumer growth efficiencies supported only 14% of mesozooplankton production and 17% of export globally. Bacterial production, in contrast, was maintained in nearly constant proportion to primary production across biomes through the compensating effects of increased partitioning of NPP to the microbial food web in oligotrophic ecosystems and increased bacterial growth efficiencies in more productive areas. Cross-biome differences in mesozooplankton trophic level were muted relative to those invoked by previous work such that significant differences in consumer growth efficiencies and the strength of consumer-resource coupling were needed to explain sharp cross-biome differences in mesozooplankton production. Lastly, simultaneous consideration of multiple flux constraints supports a highly distributed view of respiration across the planktonic food web rather than one dominated by heterotrophic bacteria. The solution herein is unlikely unique in its ability to explain observed cross-biome energy flow patterns and notable misfits remain. Resolution of existing uncertainties in observed biome-scale productivity and increasingly mechanistic physical and biological model components should yield significant refinements to estimates herein.

The long-term effects of the micrometeoroid and orbital debris environments on materials used in space

NASA Technical Reports Server (NTRS)

Cour-Palais, Burton G.

1989-01-01

The long-term effects of the orbital debris and micrometeoroid environments on materials that are current candidates for use on space vehicles are discussed. In addition, the limits of laboratory testing to determine these effects are defined and the need for space-based data is delineated. The impact effects discussed are divided into primary and secondary surfaces. Primary surfaces are those that are subject to erosion, pitting, the degradation and delamination of optical coatings, perforation of atomic oxygen erosion barriers, vapor coating of optics and the production of secondary ejecta particles. Secondary surfaces are those that are affected by the result of the perforation of primary surfaces, for example, vapor deposition on electronic components and other sensitive equipment, and the production of fragments with damage potential to internal pressurized elements. The material properties and applications that are required to prevent or lessen the effects described, are defined.

Implications of incorporating N cycling and N limitations on primary production in an individual-based dynamic vegetation model

NASA Astrophysics Data System (ADS)

Smith, B.; Wårlind, D.; Arneth, A.; Hickler, T.; Leadley, P.; Siltberg, J.; Zaehle, S.

2014-04-01

The LPJ-GUESS dynamic vegetation model uniquely combines an individual- and patch-based representation of vegetation dynamics with ecosystem biogeochemical cycling from regional to global scales. We present an updated version that includes plant and soil N dynamics, analysing the implications of accounting for C-N interactions on predictions and performance of the model. Stand structural dynamics and allometric scaling of tree growth suggested by global databases of forest stand structure and development were well reproduced by the model in comparison to an earlier multi-model study. Accounting for N cycle dynamics improved the goodness of fit for broadleaved forests. N limitation associated with low N-mineralisation rates reduces productivity of cold-climate and dry-climate ecosystems relative to mesic temperate and tropical ecosystems. In a model experiment emulating free-air CO2 enrichment (FACE) treatment for forests globally, N limitation associated with low N-mineralisation rates of colder soils reduces CO2 enhancement of net primary production (NPP) for boreal forests, while some temperate and tropical forests exhibit increased NPP enhancement. Under a business-as-usual future climate and emissions scenario, ecosystem C storage globally was projected to increase by ca. 10%; additional N requirements to match this increasing ecosystem C were within the high N supply limit estimated on stoichiometric grounds in an earlier study. Our results highlight the importance of accounting for C-N interactions in studies of global terrestrial N cycling, and as a basis for understanding mechanisms on local scales and in different regional contexts.

Communication satellite technology: State of the art and development opportunities

NASA Technical Reports Server (NTRS)

Woodford, J. B. (Compiler)

1978-01-01

Opportunities in communication satellite technology are identified and defined. Factors that tend to limit the ready availability of satellite communication to an increasingly wide group of users are evaluated. Current primary limitations on this wide utilization are the availability of frequency and/or synchronous equatorial satellite positions and the cost of individual user Earth terminals. The former could be ameliorated through the reuse of frequencies, the use of higher frequency bands, and the reduction of antenna side lobes. The latter limitation requires innovative hardware, design, careful system design, and large scale production.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Darling, Christopher Lynn

By determining the production cross sections for heavy flavor hadrons, we test the theoretical predictions from perturhative quantum chroma-dynamics (QCD). In the case of pion induced beauty production, the few published results do not resolve the issue of the applicability of perturbative QCD. This analysis is undertaken in order to help resolve this situation. We determine the total beauty and charm production cross sections using an analysis of single electron decay products. We extract the cross sections per nucleon from the two-dimensional distribution of electron p versus impact parameter ( d) to the primary vertex. We place an upper limit on the beauty production cross section of σ bmore » $$\\bar{b}$$ < 105 nb at the 90% confidence level, where the limit includes both statistical and systematic errors. The charm production cross section is determined to be σ cc = 13.9$$+2.4/atop{-2.3}$$ (stat) ± 1.8 (syst) μ.b, which is in good agreement with next-to-leading order QCD predictions and other measurements.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Darling, Christopher Lynn

By determining the production cross sections for heavy flavor hadrons, we test the theoretical predictions from perturhative quantum chroma-dynamics (QCD). In the case of pion induced beauty production, the few published results do not resolve the issue of the applicability of perturbative QCD. This analysis is undertaken in order to help resolve this situation. We determine the total beauty and charm production cross sections using an analysis of single electron decay products. We extract the cross sections per nucleon from the two-dimensional distribution of electronmore » $$p^2_{\\tau}$$ versus impact parameter (d) to the primary vertex. We place an upper limit on the beauty production cross section of $$\\sigma_{b\\overline{b}}$$ < 105 nb at the 90% confidence level, where the limit includes both statistical and systematic errors. The charm production cross section is determined to be $$\\sigma_{c\\overline{c}} = 13.9 ^{+2.4}_{-2.3}$$(stat)±l.8(syst) $$\\mu b$$, which is in good agreement with next-to-leading order QCD predictions and other measurements.« less

Natural forcings on a transformed territory overshoot thresholds of primary productivity in the Guadalquivir estuary

NASA Astrophysics Data System (ADS)

Ruiz, J.; Macías, D.; Navarro, G.

2017-09-01

A three year-long quasi continuum sampling dataset on the Guadalquivir estuary water quality was used to assess the role of light availability on its biological production. We found that inorganic nutrients within the estuary are very high (with mean values for inorganic nitrogen and phosphorous of 285 and 2.4 μM respectively) while phytoplankton biomass remains low most of the time (with a mean value of 2.6 mg/m3). A strong relationship between phytoplankton biomass and water turbidity was found indicating that, indeed, light availability is the major constraint of primary production in this system. Most of the time this limitation of primary production is not associated to enhanced turbidity connected to fresh water inputs. Instead, our data indicate that, independently of freshwater inputs, the photosynthesis is restricted by tidal forcings enhancing turbidity in an estuary that has been highly modified. Our results match with classical theories on the functioning of well-mixed, estuarine ecosystems as well as with recent modeling exercises. We also discuss the potential impacts of this particular characteristic of some estuarine systems for their management and regulatory control.

Exploring How Pain Leads to Productivity Loss in Primary Care Consulters for Osteoarthritis: A Prospective Cohort Study

PubMed Central

Wilkie, Ross; Hay, Elaine M.; Croft, Peter; Pransky, Glenn

2015-01-01

Objective Osteoarthritis pain has become a leading cause of decreased productivity and work disability in older workers, a major concern in primary care. How osteoarthritis pain leads to decreased productivity at work is unclear; the aim of this study was to elucidate causal mechanisms and thus identify potential opportunities for intervention. Methods Population-based prospective cohort study of primary care consulters with osteoarthritis. Path analysis was used to test proposed mechanisms by examining the association between pain at baseline, and onset of work productivity loss at three years for mediation by physical limitation, depression, poor sleep and poor coping mechanisms. Results High pain intensity was associated with onset of work productivity loss (Adjusted Odds Ratio 2.5; 95%CI 1.3, 4.8). About half of the effect of pain on work productivity was a direct effect, and half was mediated by the impact of pain on physical function. Depression, poor sleep quality and poor coping did not mediate the association between high pain intensity and onset of work productivity loss. Conclusions As pain is a major cause of work productivity loss, results suggest that decreasing pain should be a major focus. However, successfully improving function may have an indirect effect by decreasing the impact of pain on work productivity, especially important as significant pain reduction is often difficult to achieve. Although depression, sleep problems, and coping strategies may be directly related to work productivity loss, addressing these issues may not have much effect on the significant impact of pain on work productivity. PMID:25849594

Exploring how pain leads to productivity loss in primary care consulters for osteoarthritis: a prospective cohort study.

PubMed

Wilkie, Ross; Hay, Elaine M; Croft, Peter; Pransky, Glenn

2015-01-01

Osteoarthritis pain has become a leading cause of decreased productivity and work disability in older workers, a major concern in primary care. How osteoarthritis pain leads to decreased productivity at work is unclear; the aim of this study was to elucidate causal mechanisms and thus identify potential opportunities for intervention. Population-based prospective cohort study of primary care consulters with osteoarthritis. Path analysis was used to test proposed mechanisms by examining the association between pain at baseline, and onset of work productivity loss at three years for mediation by physical limitation, depression, poor sleep and poor coping mechanisms. High pain intensity was associated with onset of work productivity loss (Adjusted Odds Ratio 2.5; 95%CI 1.3, 4.8). About half of the effect of pain on work productivity was a direct effect, and half was mediated by the impact of pain on physical function. Depression, poor sleep quality and poor coping did not mediate the association between high pain intensity and onset of work productivity loss. As pain is a major cause of work productivity loss, results suggest that decreasing pain should be a major focus. However, successfully improving function may have an indirect effect by decreasing the impact of pain on work productivity, especially important as significant pain reduction is often difficult to achieve. Although depression, sleep problems, and coping strategies may be directly related to work productivity loss, addressing these issues may not have much effect on the significant impact of pain on work productivity.

The ecological module of BOATS-1.0: a bioenergetically-constrained model of marine upper trophic levels suitable for studies of fisheries and ocean biogeochemistry

NASA Astrophysics Data System (ADS)

Carozza, D. A.; Bianchi, D.; Galbraith, E. D.

2015-12-01

Environmental change and the exploitation of marine resources have had profound impacts on marine communities, with potential implications for ocean biogeochemistry and food security. In order to study such global-scale problems, it is helpful to have computationally efficient numerical models that predict the first-order features of fish biomass production as a function of the environment, based on empirical and mechanistic understandings of marine ecosystems. Here we describe the ecological module of the BiOeconomic mArine Trophic Size-spectrum (BOATS) model, which takes an Earth-system approach to modeling fish biomass at the global scale. The ecological model is designed to be used on an Earth System model grid, and determines size spectra of fish biomass by explicitly resolving life history as a function of local temperature and net primary production. Biomass production is limited by the availability of photosynthetic energy to upper trophic levels, following empirical trophic efficiency scalings, and by well-established empirical temperature-dependent growth rates. Natural mortality is calculated using an empirical size-based relationship, while reproduction and recruitment depend on both the food availability to larvae from net primary production and the production of eggs by mature adult fish. We describe predicted biomass spectra and compare them to observations, and conduct a sensitivity study to determine how the change as a function of net primary production and temperature. The model relies on a limited number of parameters compared to similar modeling efforts, while retaining realistic representations of biological and ecological processes, and is computationally efficient, allowing extensive parameter-space analyses even when implemented globally. As such, it enables the exploration of the linkages between ocean biogeochemistry, climate, and upper trophic levels at the global scale, as well as a representation of fish biomass for idealized studies of fisheries.

The ecological module of BOATS-1.0: a bioenergetically constrained model of marine upper trophic levels suitable for studies of fisheries and ocean biogeochemistry

NASA Astrophysics Data System (ADS)

Carozza, David Anthony; Bianchi, Daniele; Galbraith, Eric Douglas

2016-04-01

Environmental change and the exploitation of marine resources have had profound impacts on marine communities, with potential implications for ocean biogeochemistry and food security. In order to study such global-scale problems, it is helpful to have computationally efficient numerical models that predict the first-order features of fish biomass production as a function of the environment, based on empirical and mechanistic understandings of marine ecosystems. Here we describe the ecological module of the BiOeconomic mArine Trophic Size-spectrum (BOATS) model, which takes an Earth-system approach to modelling fish biomass at the global scale. The ecological model is designed to be used on an Earth-system model grid, and determines size spectra of fish biomass by explicitly resolving life history as a function of local temperature and net primary production. Biomass production is limited by the availability of photosynthetic energy to upper trophic levels, following empirical trophic efficiency scalings, and by well-established empirical temperature-dependent growth rates. Natural mortality is calculated using an empirical size-based relationship, while reproduction and recruitment depend on both the food availability to larvae from net primary production and the production of eggs by mature adult fish. We describe predicted biomass spectra and compare them to observations, and conduct a sensitivity study to determine how they change as a function of net primary production and temperature. The model relies on a limited number of parameters compared to similar modelling efforts, while retaining reasonably realistic representations of biological and ecological processes, and is computationally efficient, allowing extensive parameter-space analyses even when implemented globally. As such, it enables the exploration of the linkages between ocean biogeochemistry, climate, and upper trophic levels at the global scale, as well as a representation of fish biomass for idealized studies of fisheries.

A survey of synthetic cannabinoid consumption by current cannabis users.

PubMed

Gunderson, Erik W; Haughey, Heather M; Ait-Daoud, Nassima; Joshi, Amruta S; Hart, Carl L

2014-01-01

Despite growing concern about the increased rates of synthetic cannabinoid (SC) use and their effects, only limited data are available that addresses these issues. This study assessed the extent of SC product use and reported effects among a cohort of adult marijuana and tobacco users. A brief telephone interview was conducted with individuals who had given permission to be contacted for future research while screening for a cannabis/nicotine dependence medication development study (NCT01204723). Respondents (N = 42; 88% participation rate) were primarily young adults, male, racially diverse, and high school graduates. Nearly all currently smoked tobacco and cannabis, with 86% smoking cannabis on 5 or more days per week. Nearly all (91%) were familiar with SC products, half (50%) reported smoking SC products previously, and a substantial minority (24%) reported current use (i.e., past month). Despite a federal ban on 5 common SCs, which went into effect on March 1, 2011, a number of respondents reported continued SC product use. Common reasons reported for use included, but were not limited to, seeking a new "high" similar to that produced by marijuana and avoiding drug use detection via a positive urine screen. The primary side effects were trouble thinking clearly, headache, dry mouth, and anxiety. No significant differences were found between synthetic cannabinoid product users (ever or current) and nonusers by demographics or other characteristics. Among current marijuana and tobacco users, SC product consumption was common and persisted despite a federal ban. The primary reasons for the use of SC-containing products seem to be to evade drug detection and to experience a marijuana-like high.

Plastid proteomics for elucidating iron limited remodeling of plastid physiology in diatoms

NASA Astrophysics Data System (ADS)

Gomes, K. M.; Nunn, B. L.; Jenkins, B. D.

2016-02-01

Diatoms are important primary producers in the world's oceans and their growth is constrained in large regions by low iron availability. This low iron-induced limitation of primary production is due to the requirement for iron in components of essential metabolic pathways including key chloroplast functions such as photosynthesis and nitrate assimilation. Diatoms can bloom and accumulate high biomass during introduction of iron into low iron waters, indicating adaptations allowing for their survival in iron-limited waters and rapid growth when iron becomes more abundant. Prior studies have shown that under iron limited stress, diatoms alter plastid-specific processes including components of electron transport, size of light harvesting capacity and chlorophyll content, suggesting plastid-specific protein regulation. Due to their complex evolutionary history, resulting from a secondary endosymbiosis, knowledge regarding the complement of plastid localized proteins remains limited in comparison to other model photosynthetic organisms. While in-silico prediction of diatom protein localization provides putative candidates for plastid-localization, these analyses can be limited as most plastid prediction models were developed using plants, primary endosymbionts. In order to characterize proteins enriched in diatom chloroplast and to understand how the plastid proteome is remodeled in response to iron limitation, we used mass spectrometry based proteomics to compare plastid- enriched protein fractions from Thalassiosira pseudonana, grown in iron replete and limited conditions. These analyses show that iron stress alters regulation of major metabolic pathways in the plastid including the Calvin cycle and fatty acid synthesis. These components provide promising targets to further characterize the plastid specific response to iron limitation.

The Influence of Sea Ice on Primary Production in the Southern Ocean: A Satellite Perspective

NASA Technical Reports Server (NTRS)

Smith, Walker O., Jr.; Comiso, Josefino C.

2007-01-01

Sea ice in the Southern Ocean is a major controlling factor on phytoplankton productivity and growth, but the relationship is modified by regional differences in atmospheric and oceanographic conditions. We used the phytoplankton biomass (binned at 7-day intervals), PAR and cloud cover data from SeaWiFS, ice concentrations data from SSM/I and AMSR-E, and sea-surface temperature data from AVHRR, in combination with a vertically integrated model to estimate primary productivity throughout the Southern Ocean (south of 60"s). We also selected six areas within the Southern Ocean and analyzed the variability of the primary productivity and trends through time, as well as the relationship of sea ice to productivity. We found substantial interannual variability in productivity from 1997 - 2005 in all regions of the Southern Ocean, and this variability appeared to be driven in large part by ice dynamics. The most productive regions of Antarctic waters were the continental shelves, which showed the earliest growth, the maximum biomass, and the greatest areal specific productivity. In contrast, no large, sustained blooms occurred in waters of greater depth (> 1,000 m). We suggest that this is due to the slightly greater mixed layer depths found in waters off the continental shelf, and that the interactive effects of iron and irradiance (that is, increased iron requirements in low irradiance environments) result in the limitation of phytoplankton biomass over large regions of the Southern Ocean.

Integrating space and time: A case for phenological context in grazing studies and management

USDA-ARS?s Scientific Manuscript database

In water-limited landscapes, patterns in primary production are highly variable across space and time. Livestock grazing is a common agricultural practice worldwide and a concern is localized overuse of specific pasture resources that can exacerbate grass losses and soil erosion. On a research ranch...

Productivity limits and potentials of the principles of conservation agriculture

USDA-ARS?s Scientific Manuscript database

One of the primary challenges of our time is to feed a growing and more demanding world population with reduced external inputs and minimal environmental impacts, all under more variable and extreme climate conditions of the future. Conservation agriculture (CA) represents a set of three crop manage...

Effects of a small seagull colony on trophic status and primary production in a Mediterranean coastal system (Marinello ponds, Italy)

NASA Astrophysics Data System (ADS)

Signa, Geraldina; Mazzola, Antonio; Vizzini, Salvatrice

2012-10-01

Colonies of seabirds have been shown to influence nutrient cycling and primary production of coastal areas, but knowledge is still limited above all for smaller colonies. This study evaluates the influence of a small resident seagull colony (Larus michahellis Naumann, 1840) on a Mediterranean coastal system (Marinello ponds, Sicily, Italy). The presence of ornithogenic organic matter from seagull guano was first assessed at increasing distances from the colony using δ15N to indicate the effects of guano on the trophic status and primary production. The pond directly affected by guano deposition showed an anomalous water and sediment chemistry, especially regarding physico-chemical variables (pH), nitrogen isotopic signature, nutrient balance and phytoplankton biomass. These effects were not observed in the adjacent ponds, highlighting pronounced, small spatial-scale variability. Given the worldwide presence of seabird colonies and the scarcity of research on their effect on coastal marine areas, the study shows that seabird-mediated input may be important in influencing ecosystem dynamics of coastal areas, even where both the system in question and the colony are small.

Petroleum geology of Carter sandstone (upper Mississippian), Black Warrior Basin, Alabama

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bearden, B.L.; Mancini, E.A.

1985-03-01

The presence of combination petroleum traps makes the Black Warrior basin of northwestern Alabama an attractive area for continued hydrocarbon exploration. More than 1,500 wells have been drilled, and more than 90 separate petroleum pools have been discovered. The primary hydrocarbon reservoirs are Upper Mississippian sandstones. The Carter sandstone is the most productive petroleum reservoir in the basin. Productivity of the Carter sandstone is directly related to its environment of deposition. The Carter accumulated within a high constructive elongate to lobate delta, which prograded into the basin from the northwest to the southeast. Carter bar-finger and distal-bar lithofacies constitute themore » primary hydrocarbon reservoirs. Primary porosity in the Carter sandstone has been reduced by quartz overgrowths and calcite cementation. Petroleum traps in the Carter sandstone in central Fayette and Lamar Counties, Alabama, are primarily stratigraphic and combination (structural-stratigraphic) traps. The potential is excellent for future development of hydrocarbon reservoirs in the Upper Mississippian Carter sandstone. Frontier regions south and east of the known productive limits of the Black Warrior basin are ideal areas for continued exploration.« less

Interacting Effects of Light and Iron Availability on the Coupling of Photosynthetic Electron Transport and CO2-Assimilation in Marine Phytoplankton

PubMed Central

Schuback, Nina; Schallenberg, Christina; Duckham, Carolyn; Maldonado, Maria T.; Tortell, Philippe D.

2015-01-01

Iron availability directly affects photosynthesis and limits phytoplankton growth over vast oceanic regions. For this reason, the availability of iron is a crucial variable to consider in the development of active chlorophyll a fluorescence based estimates of phytoplankton primary productivity. These bio-optical approaches require a conversion factor to derive ecologically-relevant rates of CO2-assimilation from estimates of electron transport in photosystem II. The required conversion factor varies significantly across phytoplankton taxa and environmental conditions, but little information is available on its response to iron limitation. In this study, we examine the role of iron limitation, and the interacting effects of iron and light availability, on the coupling of photosynthetic electron transport and CO2-assimilation in marine phytoplankton. Our results show that excess irradiance causes increased decoupling of carbon fixation and electron transport, particularly under iron limiting conditions. We observed that reaction center II specific rates of electron transport (ETRRCII, mol e- mol RCII-1 s-1) increased under iron limitation, and we propose a simple conceptual model for this observation. We also observed a strong correlation between the derived conversion factor and the expression of non-photochemical quenching. Utilizing a dataset from in situ phytoplankton assemblages across a coastal – oceanic transect in the Northeast subarctic Pacific, this relationship was used to predict ETRRCII: CO2-assimilation conversion factors and carbon-based primary productivity from FRRF data, without the need for any additional measurements. PMID:26171963

Interacting Effects of Light and Iron Availability on the Coupling of Photosynthetic Electron Transport and CO2-Assimilation in Marine Phytoplankton.

PubMed

Schuback, Nina; Schallenberg, Christina; Duckham, Carolyn; Maldonado, Maria T; Tortell, Philippe D

2015-01-01

Iron availability directly affects photosynthesis and limits phytoplankton growth over vast oceanic regions. For this reason, the availability of iron is a crucial variable to consider in the development of active chlorophyll a fluorescence based estimates of phytoplankton primary productivity. These bio-optical approaches require a conversion factor to derive ecologically-relevant rates of CO2-assimilation from estimates of electron transport in photosystem II. The required conversion factor varies significantly across phytoplankton taxa and environmental conditions, but little information is available on its response to iron limitation. In this study, we examine the role of iron limitation, and the interacting effects of iron and light availability, on the coupling of photosynthetic electron transport and CO2-assimilation in marine phytoplankton. Our results show that excess irradiance causes increased decoupling of carbon fixation and electron transport, particularly under iron limiting conditions. We observed that reaction center II specific rates of electron transport (ETR(RCII), mol e- mol RCII(-1) s(-1)) increased under iron limitation, and we propose a simple conceptual model for this observation. We also observed a strong correlation between the derived conversion factor and the expression of non-photochemical quenching. Utilizing a dataset from in situ phytoplankton assemblages across a coastal--oceanic transect in the Northeast subarctic Pacific, this relationship was used to predict ETR(RCII): CO2-assimilation conversion factors and carbon-based primary productivity from FRRF data, without the need for any additional measurements.

Continuous cell lines from the Muscovy duck as potential replacement for primary cells in the production of avian vaccines.

PubMed

Jordan, Ingo; John, Katrin; Höwing, Kristin; Lohr, Verena; Penzes, Zoltán; Gubucz-Sombor, Erzsébet; Fu, Yan; Gao, Peng; Harder, Timm; Zádori, Zoltán; Sandig, Volker

2016-01-01

Veterinary vaccines contribute to food security, interrupt zoonotic transmissions, and help to maintain overall health in livestock. Although vaccines are usually cost-effective, their adoption depends on a multitude of factors. Because poultry vaccines are usually given to birds with a short life span, very low production cost per dose is one important challenge. Other hurdles are to ensure a consistent and reliable supply of very large number of doses, and to have flexible production processes to accommodate a range of different pathogens and dosage requirements. Most poultry vaccines are currently being produced on primary avian cells derived from chicken or waterfowl embryos. This production system is associated with high costs, logistic complexities, rigid intervals between harvest and production, and supply limitations. We investigated whether the continuous cell lines Cairina retina and CR.pIX may provide a substrate independent of primary cell cultures or embryonated eggs. Viruses examined for replication in these cell lines are strains associated with, or contained in vaccines against egg drop syndrome, Marek's disease, Newcastle disease, avian influenza, infectious bursal disease and Derzsy's disease. Each of the tested viruses required the development of unique conditions for replication that are described here and can be used to generate material for in vivo efficacy studies and to accelerate transfer of the processes to larger production volumes.

An investigation of siderophore production by oceanic Synechococcus

NASA Astrophysics Data System (ADS)

Wisniewski, R. J.; Webb, E. A.; Moffett, J. W.

2003-04-01

Cyanobacteria are significant contributors to global primary production. They can be found in warm high-nutrient, low-chlorophyll regions where low concentrations of iron are thought to limit primary productivity. Determining how these organisms obtain iron is critical to understanding the biogeochemical cycle of iron and its role as a determinant of marine primary production. Siderophore production has been observed in halotolerant freshwater cyanobacteria (see C.G. Trick and co-authors) and marine heterotrophic bacteria (see A. Butler, M.G. Haygood and co-authors), but to date, siderophore production in truly marine cyanobacteria has not been demonstrated. We examined the response of two marine Synechococcus species (WH7803 and WH8102) to iron stress. Axenic cultures of both Synechococcus species were grown under iron-stressed and iron-replete conditions. The supernatants of these cultures were examined using competitive ligand exchange-cathodic stripping voltammetry (CLE-CSV), a sensitive method of quantitative ligand detection. Observing ligand accumulation in culture is an analytical challenge due to the low cell densities and reduced growth rates of iron stressed marine cyanobacteria. Preliminary results suggest the presence of an iron-binding ligand in the iron-stressed cultures which was not present under iron-replete conditions. The amount of ligand produced by Synechococcus was approximately 1 × 10-18 mol/cell, comparable with the amount produced by marine heterotrophic bacteria (K. Barbeau, pers. comm.).

Ocean Primary Production Estimates from Terra MODIS and Their Dependency on Satellite Chlorophyll Alpha Algorithms

NASA Technical Reports Server (NTRS)

Essias, Wayne E.; Abbott, Mark; Carder, Kendall; Campbell, Janet; Clark, Dennis; Evans, Robert; Brown, Otis; Kearns, Ed; Kilpatrick, Kay; Balch, W.

2003-01-01

Simplistic models relating global satellite ocean color, temperature, and light to ocean net primary production (ONPP) are sensitive to the accuracy and limitations of the satellite estimate of chlorophyll and other input fields, as well as the primary productivity model. The standard MODIS ONPP product uses the new semi-analytic chlorophyll algorithm as its input for two ONPP indexes. The three primary MODIS chlorophyll Q estimates from MODIS, as well as the SeaWiFS 4 chlorophyll product, were used to assess global and regional performance in estimating ONPP for the full mission, but concentrating on 2001. The two standard ONPP algorithms were examined with 8-day and 39 kilometer resolution to quantify chlorophyll algorithm dependency of ONPP. Ancillary data (MLD from FNMOC, MODIS SSTD1, and PAR from the GSFC DAO) were identical. The standard MODIS ONPP estimates for annual production in 2001 was 59 and 58 GT C for the two ONPP algorithms. Differences in ONPP using alternate chlorophylls were on the order of 10% for global annual ONPP, but ranged to 100% regionally. On all scales the differences in ONPP were smaller between MODIS and SeaWiFS than between ONPP models, or among chlorophyll algorithms within MODIS. Largest regional ONPP differences were found in the Southern Ocean (SO). In the SO, application of the semi-analytic chlorophyll resulted in not only a magnitude difference in ONPP (2x), but also a temporal shift in the time of maximum production compared to empirical algorithms when summed over standard oceanic areas. The resulting increase in global ONPP (6-7 GT) is supported by better performance of the semi-analytic chlorophyll in the SO and other high chlorophyll regions. The differences are significant in terms of understanding regional differences and dynamics of ocean carbon transformations.

Spatial patterns of primary productivity derived from the Dynamic Habitat Indices predict patterns of species richness and distributions in the tropics

NASA Astrophysics Data System (ADS)

Suttidate, Naparat

Humans are changing the Earth's ecosystems, which has profound consequences for biodiversity. To understand how species respond to these changes, biodiversity science requires accurate assessments of biodiversity. However, biodiversity assessments are still limited in tropical regions. The Dynamic Habitat Indices (DHIs), derived from satellite data, summarize dynamic patterns of annual primary productivity: (a) cumulative annual productivity, (b) minimum annual productivity, and (c) seasonal variation in productivity. The DHIs have been successfully used in temperate regions, but not yet in the tropics. My goal was to evaluate the importance of primary productivity measured via the DHIs for assessing patterns of species richness and distributions in Thailand. First, I assessed the relationships between the DHIs and tropical bird species richness. I also evaluated the complementarity of the DHIs and topography, climate, latitudinal gradients, habitat heterogeneity, and habitat area in explaining bird species richness. I found that among three DHIs, cumulative annual productivity was the most important factor in explaining bird species richness and that the DHIs outperformed other environmental variables. Second, I developed texture measures derive from DHI cumulative annual productivity, and compared them to habitat composition and fragmentation as predictors of tropical forest bird distributions. I found that adding texture measures to habitat composition and fragmentation models improved the prediction of tropical bird distributions, especially area- and edge-sensitive tropical forest bird species. Third, I predicted the effects of trophic interactions between primary productivity, prey, and predators in relation to habitat connectivity for Indochinese tigers (Panthera tigris). I found that including trophic interactions improved habitat suitability models for tigers. However, tiger habitat is highly fragmented with few dispersal corridors. I also identified potential habitat patches and corridors that could serve as target sites for conservation. In summary, my dissertation reveals the relationship between species diversity and dynamic patterns of primary productivity. The DHIs are effective measures to identify assess broad-scale patterns of biodiversity in tropical ecosystems, and assist conservation planning and resource management. My dissertation research contributes substantially to biodiversity science, and has broad societal relevance, in striving to protect biodiversity and the ecosystem services given rapid environmental changes.

Changing nutrient stoichiometry affects phytoplankton production, DOP accumulation and dinitrogen fixation - a mesocosm experiment in the eastern tropical North Atlantic

NASA Astrophysics Data System (ADS)

Meyer, J.; Löscher, C. R.; Neulinger, S. C.; Reichel, A. F.; Loginova, A.; Borchard, C.; Schmitz, R. A.; Hauss, H.; Kiko, R.; Riebesell, U.

2016-02-01

Ocean deoxygenation due to climate change may alter redox-sensitive nutrient cycles in the marine environment. The productive eastern tropical North Atlantic (ETNA) upwelling region may be particularly affected when the relatively moderate oxygen minimum zone (OMZ) deoxygenates further and microbially driven nitrogen (N) loss processes are promoted. Consequently, water masses with a low nitrogen to phosphorus (N : P) ratio could reach the euphotic layer, possibly influencing primary production in those waters. Previous mesocosm studies in the oligotrophic Atlantic Ocean identified nitrate availability as a control of primary production, while a possible co-limitation of nitrate and phosphate could not be ruled out. To better understand the impact of changing N : P ratios on primary production and N2 fixation in the ETNA surface ocean, we conducted land-based mesocosm experiments with natural plankton communities and applied a broad range of N : P ratios (2.67-48). Silicic acid was supplied at 15 µmol L-1 in all mesocosms. We monitored nutrient drawdown, biomass accumulation and nitrogen fixation in response to variable nutrient stoichiometry. Our results confirmed nitrate to be the key factor determining primary production. We found that excess phosphate was channeled through particulate organic matter (POP) into the dissolved organic matter (DOP) pool. In mesocosms with low inorganic phosphate availability, DOP was utilized while N2 fixation increased, suggesting a link between those two processes. Interestingly this observation was most pronounced in mesocosms where nitrate was still available, indicating that bioavailable N does not necessarily suppress N2 fixation. We observed a shift from a mixed cyanobacteria-proteobacteria dominated active diazotrophic community towards a diatom-diazotrophic association of the Richelia-Rhizosolenia symbiosis. We hypothesize that a potential change in nutrient stoichiometry in the ETNA might lead to a general shift within the diazotrophic community, potentially influencing primary productivity and carbon export.

The Biogeochemical Role of Antarctic Krill and Baleen Whales in Southern Ocean Nutrient Cycling.

NASA Astrophysics Data System (ADS)

Ratnarajah, L.

2015-12-01

Iron limits primary productivity in large areas of the Southern Ocean. It has been suggested that baleen whales form a crucial part of biogeochemical cycling processes through the consumption of nutrient-rich krill and subsequent defecation, but evidence on their contribution is scarce. We analysed the concentration of iron in Antarctic krill and baleen whale faeces and muscle. Iron concentrations in Antarctic krill were over 1 million times higher, and whale faecal matter were almost 10 million times higher than typical Southern Ocean High Nutrient Low Chlorophyll seawater concentrations. This suggests that Antarctic krill act as a reservoir of in in Southern Ocean surface waters, and that baleen whales play an important role in converting this fixed iron into a liquid form in their faeces. We developed an exploratory model to examine potential contribution of blue, fin and humpback whales to the Southern Ocean iron cycle to explore the effect of the recovery of great whales to historical levels. Our results suggest that pre-exploitation populations of blue whales and, to a lesser extent fin and humpback whales, could have contributed to the more effective recycling of iron in surface waters, resulting in enhanced phytoplankton production. This enhanced primary productivity is estimated to be: 8.3 x 10-5 to 15 g C m-2 yr-1 (blue whales), 7 x 10-5 to 9 g C m-2 yr-1 (fin whales), and 10-5 to 1.7 g C m-2 yr-1 (humpback whales). To put these into perspective, current estimates of primary production in the Southern Ocean from remotely sensed ocean colour are in the order of 57 g C m-2 yr-1 (south of 50°). The high degree of uncertainty around the magnitude of these increases in primary productivity is mainly due to our limited quantitative understanding of key biogeochemical processes including iron content in krill, krill consumption rates by whales, persistence of iron in the photic zone, bioavailability of retained iron, and carbon-to-iron ratio of phytoplankton. We are actively working on addressing these unknowns.

Photosynthetic characteristics and estimated growth rates indicate grazing is the proximate control of primary production in the equatorial Pacific

NASA Technical Reports Server (NTRS)

Cullen, John J.; Lewis, Marlon R.; Davis, Curtiss O.; Barber, Richard T.

1992-01-01

Macronutrients persist in the surface layer of the equatorial Pacific because the production of phytoplankton is limited; the nature of this limitation has yet to be resolved. Measurements of photosynthesis as a function of irradiance (P-I) provide information on the control of primary productivity, a question of great biogeochemical importance. Accordingly, P-I was measured in the equatorial Pacific along 150 deg W, during February-March 1988. Diel variability of P-I showed a pattern consistent with nocturnal vertical mixing in the upper 20 m followed by diurnal stratification, causing photoinhibition near the surface at midday. Otherwise, the distribution of photosynthetic parameters with depth and the stability of P-I during simulated in situ incubations over 2 days demonstrated that photoadaptation was nearly complete at the time of sampling: photoadaptation had not been effectively countered by upwelling or vertical mixing. Measurements of P-I and chlorophyll during manipulations of trace elements showed that simple precautions to minimize contamination were sufficient to obtain valid rate measurements and that the specific growth rates of phytoplankton were fairly high in situ, a minimum of 0.6/d. Diel variability of beam attenuation also indicated high specific growth rates of phytoplankton and a strong coupling of production with grazing. It appears that grazing is the proximate control on the standing crop of phytoplankton. Nonetheless, the supply of a trace nutrient such as iron might ultimately regulate productivity by influencing species composition and food-web structure.

Widespread iron limitation of phytoplankton in the south pacific ocean

PubMed

Behrenfeld; Kolber

1999-02-05

Diel fluorescence patterns were discovered in phytoplankton sampled over 7000 kilometers of the South Pacific Ocean that appear indicative of iron-limiting growth conditions. These patterns were rapidly lost after in situ iron enrichment and were not observed during a 15,000-kilometer transect in the Atlantic Ocean where iron concentrations are relatively high. Laboratory studies of marine Synechococcus sp. indicated that the patterns in the South Pacific are a unique manifestation of iron limitation on the fluorescence signature of state transitions. Results suggest that primary productivity is iron limited not only throughout the equatorial Pacific but also over much of the vast South Pacific gyre.

Sea ice-induced cold air advection as a mechanism controlling tundra primary productivity

NASA Astrophysics Data System (ADS)

Macias-Fauria, M.; Karlsen, S. R.

2015-12-01

The recent sharp decline in Arctic sea ice extent, concentration, and volume leaves urgent questions regarding its effects on ecological processes. Changes in tundra productivity have been associated with sea ice dynamics on the basis that most tundra ecosystems lay close to the sea. Although some studies have addressed the potential effect of sea ice decline on the primary productivity of terrestrial arctic ecosystems (Bhatt et al., 2010), a clear picture of the mechanisms and patterns linking both processes remains elusive. We hypothesised that sea ice might influence tundra productivity through 1) cold air advection during the growing season (direct/weather effect) or 2) changes in regional climate induced by changes in sea ice (indirect/climate effect). We present a test on the direct/weather effect hypothesis: that is, tundra productivity is coupled with sea ice when sea ice remains close enough from land vegetation during the growing season for cold air advection to limit temperatures locally. We employed weekly MODIS-derived Normalised Difference Vegetation Index (as a proxy for primary productivity) and sea ice data at a spatial resolution of 232m for the period 2000-2014 (included), covering the Svalbard Archipelago. Our results suggest that sea ice-induced cold air advection is a likely mechanism to explain patterns of NDVI trends and heterogeneous spatial dynamics in the Svalbard archipelago. The mechanism offers the potential to explain sea ice/tundra productivity dynamics in other Arctic areas.

Carbon: Chlorophyll Ratios and Net Primary Productivity of Subarctic Pacific Surface Waters Derived From Autonomous Shipboard Sensors

NASA Astrophysics Data System (ADS)

Burt, William J.; Westberry, Toby K.; Behrenfeld, Michael J.; Zeng, Chen; Izett, Robert W.; Tortell, Philippe D.

2018-02-01

We present optically derived estimates of phytoplankton carbon (Cphyto) and chlorophyll a concentration (Chl) across a wide range of productivity and hydrographic regimes in the Subarctic Pacific Ocean. Our high-frequency measurements capture changes in Cphyto and Chl across regional gradients in macronutrient and micronutrient limitations and submesoscale hydrographic frontal zones. Throughout the majority of our survey region, carbon to chlorophyll ratios (Cphyto:Chl) ranged between 50 and 100. Lower values (10-20) were constrained to the highly productive coastal upwelling system along Vancouver Island, whereas higher estimated values (>200) were found directly off the southern British Columbia continental shelf. Further offshore, Cphyto:Chl was less variable, ranging from 50 to 80 in high nutrient low Chl waters in June and from 80 to 120 in the Gulf of Alaska in July. Much of the variability in Cphyto:Chl throughout the study region could be explained by mixed-layer light levels (i.e., photoacclimation), with additional variability attributed to nutrient-controlled changes in phytoplankton growth rates in some regions. Elevated Cphyto:Chl ratios resulting from apparent nutrient stress were found in areas of low macronutrient concentrations. In contrast, iron-limited waters exhibited Cphyto:Chl ratios lower than predicted from the photoacclimation model. Applying the carbon-based production model, we derived Cphyto and Chl-based estimates of net primary productivity, which showed good coherence with independent 14C uptake measurements. Our results highlight the utility of ship-board optical data to examine phytoplankton physiological ecology and productivity in surface marine waters.

What drives the prescribing of growth hormone preparations in England? Prices versus patient preferences.

PubMed

Chapman, Stephen R; Fitzpatrick, Raymond W; Aladul, Mohammed I

2017-04-11

The patent expiry of a number of biological medicines and the advent of biosimilars raised the expectations of healthcare commissioners that biosimilars would reduce the high cost of these medicines and produce potential savings to the NHS. We aimed to examine the prescribing pattern of different growth hormone preparations (ready to use and reconstitution requiring) in primary and secondary care in England to determine relative rates of decrease or increase and identify the possible factors influencing prescribing following the introduction of biosimilar growth hormone in 2008. Longitudinal observational study. Primary care prescribing cost and volume data was derived from the NHS business services authority website, and for secondary care from the DEFINE database, between April 2011 and December 2015. Quarterly prescribing analysis to examine trends and measure the relationship between usage and price. Expenditure and usage of growth hormone in primary care decreased by 17.91% and 7.29%, respectively, whereas expenditure and usage in secondary care increased by 68.41% and 100%, respectively, between April 2011 and December 2015. The usage of reconstitution requiring products significantly declined in primary care (R²=0.9292) and slightly increased in use in secondary care (R²=0.139). In contrast, the usage of ready-to-use products significantly increased in use in primary (R²=0.7526) and secondary care (R²=0.9633), respectively. Weak or no correlation existed between the usage and price of growth hormone preparations in primary and secondary care. The price of growth hormone products was not the key factor influencing the prescribing of the biological medicines. The main driver for specific product selection was the ease of use and the number of steps in dose preparation. Prescribers appear to be taking into account patient preferences rather than cost in their prescribing decisions. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/.

Household cleaning products and the risk of allergic dermatitis: a prospective cohort study with primary-school children.

PubMed

Liu, X; Tan, L; Yu, I T S; Zhang, Z; Wong, C C-Y; Guo, C; Ho, K F; Lau, A P S; Yeoh, E K; Lee, A; Lao, X Q

2018-04-01

Household cleaning products are widely used by the public, but limited data have been obtained on whether their use induces allergic dermatitis in children. This study investigated the association between exposure to household cleaning products and allergic dermatitis in primary-school children. A prospective cohort study of Hong Kong primary-school children was conducted between 2012 and 2014. A baseline survey was administered to 1812 students who did not have allergic dermatitis. Information on respiratory symptoms, exposure to household chemical cleaning products and other topics was collected using a self-administered questionnaire. A cumulative chemical burden (CCB) score was calculated for each student by summing the duration of exposure to 14 chemical cleaning products. Principal component analysis was used to identify patterns in the use of these cleaning products. Logistic regression was performed to calculate relative risk (RR) with 95% confidence intervals (CIs) after adjusting for potential confounders. Eighty-nine (4.9%) of the students surveyed had dermatitis during the follow-up. However, exposure to individual chemical cleaning products was not found to be associated with the children's allergic dermatitis (all P > 0.05). In contrast to those in the lowest tertile, neither CCB scores in the middle tertile (RR: 1.16, 95% CI: 0.67 to 2.00) nor those in the highest tertile (RR: 1.24, 95% CI: 0.73 to 2.14) were significantly associated with the risk of allergic dermatitis. The adjusted RR for every 5-unit increment in CCB score was 1.01 (95% CI: 0.98 to 1.03). Four patterns of cleaning-product use were derived, but none were found to be associated with the risk of dermatitis (all P > 0.05). The use of household chemical cleaning products is not associated with the risk of dermatitis in primary-school children. © 2017 European Academy of Dermatology and Venereology.

Mapping of quantitative trait loci associated with partial resistance to phytophthora sojae and flooding tolerance in soybean

USDA-ARS?s Scientific Manuscript database

Phytophthora root rot (PRR) caused by Phytophthora sojae Kaufm. & Gerd. and flooding can limit growth and productivity, of soybean [Glycine max (L.) Merr.], especially on poorly drained soils. The primary objective of this research project was to map quantitative trait loci (QTL) associated with f...

Power and limitation of soil properties as predictors of rangeland health and ecosystem functioning in a Northern mixed-grass prairie[Abstract

USDA-ARS?s Scientific Manuscript database

Soil properties are thought to affect rangeland ecosystem functioning (e.g. primary productivity, hydrology), and thus soil variables that are consistently correlated with key ecosystem functions may be general indicators of rangeland health. We summarize results from several studies in mixed-grass...

Organic rice IPM research update in the United States

USDA-ARS?s Scientific Manuscript database

U.S. organic rice production has steadily increased over the past decade, with a majority of the acreage being grown in the southern region. Because of the warm and humid environments and the long growing season in the region, weed, disease and insect pests are among the primary factors limiting org...

Evaluation of cover crops drill interseeded into corn across the mid-Atlantic region

USDA-ARS?s Scientific Manuscript database

Cover crop adoption remains low in the mid-Atlantic region despite the potential conservation and production benefits. The short growing season window after corn (Zea mays L.), is a primary factor limiting cover crop adoption in these regions. A high-clearance grain drill has been developed to allow...

RAINFALL STIMULATION OF PRIMARY PRODUCTION IN WESTERN ATLANTIC OCEAN WATERS: ROLES OF DIFFERENT NITROGEN SOURCES AND CO-LIMITING NUTRIENTS. (R825243)

EPA Science Inventory

The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Concl...

The Sky Is the Limit: Reconstructing Physical Geography from an Aerial Perspective

ERIC Educational Resources Information Center

Williams, Richard D.; Tooth, Stephen; Gibson, Morgan

2017-01-01

In an era of rapid geographical data acquisition, interpretations of remote sensing products are an integral part of many undergraduate geography degree schemes but there are fewer opportunities for collection and processing of primary remote sensing data. Unmanned Aerial Vehicles (UAVs) provide a relatively inexpensive opportunity to introduce…

Understanding of evolutionary genomics of invasive species of rice

USDA-ARS?s Scientific Manuscript database

Red rice is an aggressive, weedy form of cultivated rice (Oryza sativa) that infests crop fields and is a primary factor limiting rice productivity in the U.S. and worldwide. As the weedy relative of a genomic model species, red rice is a model for understanding the genetic and evolutionary mechani...

Productivity, quality, and patient satisfaction: comparison of part-time and full-time primary care physicians.

PubMed

Fairchild, D G; McLoughlin, K S; Gharib, S; Horsky, J; Portnow, M; Richter, J; Gagliano, N; Bates, D W

2001-10-01

Although few data are available, many believe that part-time primary care physicians (PCPs) are less productive and provide lower quality care than full-time PCPs. Some insurers exclude part-time PCPs from their provider networks. To compare productivity, quality of preventive care, patient satisfaction, and risk-adjusted resource utilization of part-time and full-time PCPs. Retrospective cohort study. Boston. PCPs affiliated with 2 academic outpatient primary care networks. PCP productivity, patient satisfaction, resource utilization, and compliance with screening guidelines. Part-time PCP productivity was greater than that of full-time PCPs (2.1 work relative value units (RVUs)/bookable clinical hour versus 1.3 work RVUs/bookable clinical hour, P< .01). A similar proportion of part-time PCPs (80%) and full-time PCPs (75%) met targets for mammography, Pap smears, and cholesterol screening (P = .67). After adjusting for clinical case mix, practice location, gender, board certification status, and years in practice, resource utilization of part-time PCPs (138 dollars [95% confidence interval (CI), 108 dollars to 167 dollars]) was similar to that of full-time PCPs (139 dollars [95% CI, 108 dollars to 170 dollars], P = .92). Patient satisfaction was similar for part-time and full-time PCPs. In these academic primary care practices, rates of patient satisfaction, compliance with screening guidelines, and resource utilization were similar for part-time PCPs compared to full-time PCPs. Productivity per clinical hour was markedly higher for part-time PCPs. Despite study limitations, these data suggest that academic part-time PCPs are at least as efficient as full-time PCPs and that the quality of their work is similar.

Nutrient co-limitation at the boundary of an oceanic gyre

NASA Astrophysics Data System (ADS)

Browning, Thomas J.; Achterberg, Eric P.; Rapp, Insa; Engel, Anja; Bertrand, Erin M.; Tagliabue, Alessandro; Moore, C. Mark

2017-11-01

Nutrient limitation of oceanic primary production exerts a fundamental control on marine food webs and the flux of carbon into the deep ocean. The extensive boundaries of the oligotrophic sub-tropical gyres collectively define the most extreme transition in ocean productivity, but little is known about nutrient limitation in these zones. Here we present the results of full-factorial nutrient amendment experiments conducted at the eastern boundary of the South Atlantic gyre. We find extensive regions in which the addition of nitrogen or iron individually resulted in no significant phytoplankton growth over 48 hours. However, the addition of both nitrogen and iron increased concentrations of chlorophyll a by up to approximately 40-fold, led to diatom proliferation, and reduced community diversity. Once nitrogen-iron co-limitation had been alleviated, the addition of cobalt or cobalt-containing vitamin B12 could further enhance chlorophyll a yields by up to threefold. Our results suggest that nitrogen-iron co-limitation is pervasive in the ocean, with other micronutrients also approaching co-deficiency. Such multi-nutrient limitations potentially increase phytoplankton community diversity.

The glacial iron cycle from source to export

NASA Astrophysics Data System (ADS)

Hawkings, J.; Wadham, J. L.; Tranter, M.; Raiswell, R.; Benning, L. G.; Statham, P. J.; Tedstone, A. J.; Nienow, P. W.; Telling, J.; Bagshaw, E.; Simmons, S. L.

2014-12-01

Nutrient availability limits primary production in large sectors of the world's oceans. Iron is the major limiting nutrient in around one third of the oceanic euphotic zone, most significantly in the Southern Ocean proximal to Antarctica. In these areas the availability of bioavailable iron can influence the amount of primary production, and thus the strength of the biological pump and associated carbon drawdown from the atmosphere. Despite experiencing widespread iron limitation, the Polar oceans are among the most productive on Earth. Due to the extreme cold, remoteness and their perceived "stasis", ice sheets have previously been though of as insignificant in global biogeochemical cycles. However, large marine algal blooms have been observed in iron-limited areas where glacial influence is large, and it is possible that these areas are stimulated by glacial bioavailable iron input. Here we discuss the importance of the Greenland and Antarctic ice sheets in the global iron cycle. Using field collected trace element data, bulk meltwater chemistry and mineralogical analysis, including photomicrographs, EELS and XANES, we present, for the first time, a conceptual model of the glacial iron cycle from source to export. Using this data we discuss the sources of iron in glacial meltwater, transportation and alteration through the glacial system, and subsequent export to downstream environments. Data collected in 2012 and 2013 from two different Greenlandic glacial catchments are shown, with the most detailed breakdown of iron speciation and concentrations in glacial areas yet reported. Furthermore, the first data from Greenlandic icebergs is presented, allowing meltwater-derived and iceberg-derived iron export to be compared, and the influence of both in marine productivity to be estimated. Using our conceptual model and flux estimates from our dataset, glacial iron delivery in both the northern and southern hemisphere is discussed. Finally, we compare our flux estimates to other major iron sources to the polar regions such as aeolian dust, and discuss potential implications of increased melting of the ice sheets on the global iron cycle in the future.

Carbon isotope variations in a solar pond microbial mat: Role of environmental gradients as steering variables

NASA Astrophysics Data System (ADS)

Schidlowski, Manfred; Gorzawski, Hendrik; Dor, Inka

1994-05-01

A biogeochemical traverse is presented for a juvenile benthic mat covering the depth profile of an artificially stratified and eutrophicated hypersaline heliothermal pond with known gradients of temperature, salinity, pH, and light transmission. It can be shown that visual mat development depends primarily on temperature and salinity as main environmental steering variables whose increase with depth goes along with the attenuation and final disappearance of a visible microbial film in the pond's hypolimnic compartment. Recorded biogeochemical parameters (C org content, cell numbers, chlorophyll-a content) evidently reflect, as either biomass- or productivity-related index functions, the visually perceptible growth gradient of the microbial ecosystem along the pond slope. The observed coincidence of maxima in these index functions with maxima in δ13Corg clearly identifies high rates of primary productivity as the agent ultimately responsible for the generation of isotopically heavy ( 13C-enriched) biomass in these and related environments. Extreme demands placed on the local feeder pool of dissolved inorganic carbon by high rates of primary productivity entertained by the mat-forming microbenthos obviously give rise to severe CO 2 limitation, enforcing the operation of a diffusion-(supply-)limited assimilatory pathway with an isotopically indiscriminate metabolization of the available CO 2 resources.

Measured and modelled leaf and stand-scale productivity across a soil moisture gradient and a severe drought.

PubMed

Wright, J K; Williams, M; Starr, G; McGee, J; Mitchell, R J

2013-02-01

Environmental controls on carbon dynamics operate at a range of interacting scales from the leaf to landscape. The key questions of this study addressed the influence of water and nitrogen (N) availability on Pinus palustris (Mill.) physiology and primary productivity across leaf and canopy scales, linking the soil-plant-atmosphere (SPA) model to leaf and stand-scale flux and leaf trait/canopy data. We present previously unreported ecophysiological parameters (e.g. V(cmax) and J(max)) for P. palustris and the first modelled estimates of its annual gross primary productivity (GPP) across xeric and mesic sites and under extreme drought. Annual mesic site P. palustris GPP was ∼23% greater than at the xeric site. However, at the leaf level, xeric trees had higher net photosynthetic rates, and water and light use efficiency. At the canopy scale, GPP was limited by light interception (canopy level), but co-limited by nitrogen and water at the leaf level. Contrary to expectations, the impacts of an intense growing season drought were greater at the mesic site. Modelling indicated a 10% greater decrease in mesic GPP compared with the xeric site. Xeric P. palustris trees exhibited drought-tolerant behaviour that contrasted with mesic trees' drought-avoidance behaviour. © 2012 Blackwell Publishing Ltd.

Carbon cycling in a high-arctic marine ecosystem - Young Sound, NE Greenland

NASA Astrophysics Data System (ADS)

Rysgaard, Søren; Nielsen, Torkel Gissel

2006-10-01

Young Sound is a deep-sill fjord in NE Greenland (74°N). Sea ice usually begins to form in late September and gains a thickness of ∼1.5 m topped with 0-40 cm of snow before breaking up in mid-July the following year. Primary production starts in spring when sea ice algae begin to flourish at the ice-water interface. Most biomass accumulation occurs in the lower parts of the sea ice, but sea ice algae are observed throughout the sea ice matrix. However, sea ice algal primary production in the fjord is low and often contributes only a few percent of the annual phytoplankton production. Following the break-up of ice, the immediate increase in light penetration to the water column causes a steep increase in pelagic primary production. Usually, the bloom lasts until August-September when nutrients begin to limit production in surface waters and sea ice starts to form. The grazer community, dominated by copepods, soon takes advantage of the increased phytoplankton production, and on an annual basis their carbon demand (7-11 g C m -2) is similar to phytoplankton production (6-10 g C m -2). Furthermore, the carbon demand of pelagic bacteria amounts to 7-12 g C m -2 yr -1. Thus, the carbon demand of the heterotrophic plankton is approximately twice the estimated pelagic primary production, illustrating the importance of advected carbon from the Greenland Sea and from land in fuelling the ecosystem. In the shallow parts of the fjord (<40 m) benthic primary producers dominate primary production. As a minimum estimate, a total of 41 g C m -2 yr -1 is fixed by primary production, of which phytoplankton contributes 15%, sea ice algae <1%, benthic macrophytes 62% and benthic microphytes 22%. A high and diverse benthic infauna dominated by polychaetes and bivalves exists in these shallow-water sediments (<40 m), which are colonized by benthic primary producers and in direct contact with the pelagic phytoplankton bloom. The annual benthic mineralization is 32 g C m -2 yr -1 of which megafauna accounts for 17%. In deeper waters benthic mineralization is 40% lower than in shallow waters and megafauna, primarily brittle stars, accounts for 27% of the benthic mineralization. The carbon that escapes degradation is permanently accumulated in the sediment, and for the locality investigated a rate of 7 g C m -2 yr -1 was determined. A group of walruses (up to 50 adult males) feed in the area in shallow waters (<40 m) during the short, productive, ice-free period, and they have been shown to be able to consume <3% of the standing stock of bivalves ( Hiatella arctica, Mya truncata and Serripes Groenlandicus), or half of the annual bivalve somatic production. Feeding at greater depths is negligible in comparison with their feeding in the bivalve-rich shallow waters.

Evaluation of Organic Proxies for Quantifying Past Primary Productivity

NASA Astrophysics Data System (ADS)

Raja, M.; Rosell-Melé, A.; Galbraith, E.

2017-12-01

Ocean primary productivity is a key element of the marine carbon cycle. However, its quantitative reconstruction in the past relies on the use of biogeochemical models as the available proxy approaches are qualitative at best. Here, we present an approach that evaluates the use of phytoplanktonic biomarkers (i.e. chlorins and alkenones) as quantitative proxies to reconstruct past changes in marine productivity. We compare biomarkers contents in a global suite of core-top sediments to sea-surface chlorophyll-a abundance estimated by satellites over the last 20 years, and the results are compared to total organic carbon (TOC). We also assess satellite data and detect satellite limitations and biases due to the complexity of optical properties and the actual defined algorithms. Our findings show that sedimentary chlorins can be used to track total sea-surface chlorophyll-a abundance as an indicator for past primary productivity. However, degradation processes restrict the application of this proxy to concentrations below a threshold value (1µg/g). Below this threshold, chlorins are a useful tool to identify reducing conditions when used as part of a multiproxy approach to assess redox sedimentary conditions (e.g. using Re, U). This is based on the link between anoxic/disoxic conditions and the flux of organic matter from the sea-surface to the sediments. We also show that TOC is less accurate than chlorins for estimating sea-surface chlorophyll-a due to the contribution of terrigenous organic matter, and the different degradation pathways of all organic compounds that TOC includes. Alkenones concentration also relates to primary productivity, but they are constrained by different processes in different regions. In conclusion, as lons as specific constraints are taken into account, our study evaluates the use of chlorins and alkenones as quantitative proxies of past primary productivity, with more accuracy than by using TOC.

Factors affecting the estimate of primary production from space

NASA Technical Reports Server (NTRS)

Balch, W. M.; Byrne, C. F.

1994-01-01

Remote sensing of primary production in the euphotic zone has been based mostly on visible-band and water-leaving radiance measured with the coastal zone color scanner. There are some robust, simple relationships for calculating integral production based on surface measurements, but they also require knowledge for photoadaptive parameters such as maximum photosynthesis which currently cannot be obtained from spave. A 17,000-station data set is used to show that space-based estimates of maximum photosynthesis could improve predictions of psi, the water column light utiliztion index, which is an important term in many primary productivity models. Temperature is also examined as a factor for predicting hydrographic structure and primary production. A simple model is used to relate temperature and maximum photosynthesis; the model incorporates (1) the positive relationship between maximum photosynthesis and temperature and (2) the strongly negative relationship between temperature and nitrate in the ocean (which directly affects maximum growth rates via nitrogen limitation). Since these two factors relate to carbon and nitrogen, 'balanced carbon/nitrogen assimilation' was calculated using the Redfield ratio, It is expected that the relationship between maximum balanced carbon assimilation versus temperature is concave-down, with the peak dependent on nitrate uptake kinetics, temperature-nitrate relationships,a nd the carbon chlorophyll ration. These predictions were compared with the sea truth data. The minimum turnover time for nitrate was also calculated using this approach. Lastly, sea surface temperature gradients were used to predict the slope of isotherms (a proxy for the slope of isopycnals in many waters). Sea truth data show that at size scales of several hundred kilometers, surface temperature gradients can provide information on the slope of isotherms in the top 200 m of the water column. This is directly relevant to the supply of nutrients into the surface mixed layer, which is useful for predicting integral biomass and primary production.

How would the ocean carbon cycle be affected by radiation management geoengineering?

NASA Astrophysics Data System (ADS)

Lauvset, Siv K.; Tjiputra, Jerry; Muri, Helene; Grini, Alf

2017-04-01

Human emissions of carbon dioxide to the atmosphere is unequivocally causing global warming and climate change (IPCC, 2013). At the 21st United Nations Framework Convention on climate Change (UNFCCC) Conference of the Parties it was agreed to limit the increase in global average temperature to 2˚C above pre-industrial levels. We have used the Norwegian Earth System Model (NorESM1-ME) and applied radiation management (RM) methods in order to bring the future radiative forcing change in the RCP8.5 CO2 emission scenario in line with that of the RCP4.5 CO2 emission scenario. Three different RM methods, with varying effects on atmospheric physics, were used in these experiments: stratospheric aerosol injection (SAI); marine sky brightening (MSB); and cirrus cloud thinning (CCT). Here we will present how the different methods affect the ocean carbon cycle, which is a well-known and important feedback on climate change. In particular, we focus on changes to the ocean primary production, which are known to be spatially and temporally complex. We show that while the global mean temperature when applying RM is similar to that in the RCP4.5 scenario, no RM method produce similar ocean primary production as in the RCP4.5 scenario. Our simulations indicate that when it comes to the ocean primary productivity there will be regional winners and losers. The different RM methods also produce spatially very different results, partly linked to how the different RM methods affect clouds. The results of this work does nothing to diminish the complexity of climate impacts on primary production, but rather highlights that any change in ocean primary production is driven by a combination of several parameters, which all change in different ways. The experiments highlight the, at present, uncertain changes to ocean productivity in the future and highlights the caution necessary before additional human perturbations to the Earth system is attempted.

Features of primary damage by high energy displacement cascades in concentrated Ni-based alloys

DOE PAGES

Béland, Laurent Karim; Lu, Chenyang; Osetskiy, Yuri N.; ...

2016-02-25

Alloying of Ni with Fe or Co reduces primary damage production under ion irradiation. Similar results have been obtained from classical molecular dynamics simulations of 1, 10, 20, and 40 keV collision cascades in Ni, NiFe, and NiCo. In all cases, a mix of imperfect stacking fault tetrahedra, faulted loops with a 1/3 {111} Burgers vector, and glissile interstitial loops with a 1/2 {110} Burgers vector were formed, along with small sessile point defect complexes and clusters. Primary damage reduction occurs by three mechanisms. First, Ni-Co, Ni-Fe, Co-Co, and Fe-Fe short-distance repulsive interactions are stiffer than Ni-Ni interactions, which leadmore » to a decrease in damage formation during the transition from the supersonic ballistic regime to the sonic regime. This largely controls final defect production. Second, alloying decreases thermal conductivity, leading to a longer thermal spike lifetime. The associated annealing reduces final damage production. These two mechanisms are especially important at cascades energies less than 40 keV. Third, at the higher energies, the production of large defect clusters by subcascades is inhibited in the alloys. A number of challenges and limitations pertaining to predictive atomistic modeling of alloys under high-energy particle irradiation are discussed.« less

Trophic structure of coastal Antarctic food webs associated with changes in sea ice and food supply.

PubMed

Norkko, A; Thrush, S F; Cummings, V J; Gibbs, M M; Andrew, N L; Norkko, J; Schwarz, A M

2007-11-01

Predicting the dynamics of ecosystems requires an understanding of how trophic interactions respond to environmental change. In Antarctic marine ecosystems, food web dynamics are inextricably linked to sea ice conditions that affect the nature and magnitude of primary food sources available to higher trophic levels. Recent attention on the changing sea ice conditions in polar seas highlights the need to better understand how marine food webs respond to changes in such broad-scale environmental drivers. This study investigated the importance of sea ice and advected primary food sources to the structure of benthic food webs in coastal Antarctica. We compared the isotopic composition of several seafloor taxa (including primary producers and invertebrates with a variety of feeding modes) that are widely distributed in the Antarctic. We assessed shifts in the trophic role of numerically dominant benthic omnivores at five coastal Ross Sea locations. These locations vary in primary productivity and food availability, due to their different levels of sea ice cover, and proximity to polynyas and advected primary production. The delta15N signatures and isotope mixing model results for the bivalves Laternula elliptica and Adamussium colbecki and the urchin Sterechinus neumeyeri indicate a shift from consumption of a higher proportion of detritus at locations with more permanent sea ice in the south to more freshly produced algal material associated with proximity to ice-free water in the north and east. The detrital pathways utilized by many benthic species may act to dampen the impacts of large seasonal fluctuations in the availability of primary production. The limiting relationship between sea ice distribution and in situ primary productivity emphasizes the role of connectivity and spatial subsidies of organic matter in fueling the food web. Our results begin to provide a basis for predicting how benthic ecosystems will respond to changes in sea ice persistence and extent along environmental gradients in the high Antarctic.

Hydrogen production by Cyanobacteria.

PubMed

Dutta, Debajyoti; De, Debojyoti; Chaudhuri, Surabhi; Bhattacharya, Sanjoy K

2005-12-21

The limited fossil fuel prompts the prospecting of various unconventional energy sources to take over the traditional fossil fuel energy source. In this respect the use of hydrogen gas is an attractive alternate source. Attributed by its numerous advantages including those of environmentally clean, efficiency and renew ability, hydrogen gas is considered to be one of the most desired alternate. Cyanobacteria are highly promising microorganism for hydrogen production. In comparison to the traditional ways of hydrogen production (chemical, photoelectrical), Cyanobacterial hydrogen production is commercially viable. This review highlights the basic biology of cynobacterial hydrogen production, strains involved, large-scale hydrogen production and its future prospects. While integrating the existing knowledge and technology, much future improvement and progress is to be done before hydrogen is accepted as a commercial primary energy source.

Across a macro-ecological gradient forest competition is strongest at the most productive sites

PubMed Central

Prior, Lynda D.; Bowman, David M. J. S.

2014-01-01

We tested the hypothesis that the effect of forest basal area on tree growth interacts with macro-ecological gradients of primary productivity, using a large dataset of eucalypt tree growth collected across temperate and sub- tropical mesic Australia. To do this, we derived an index of inter-tree competition based on stand basal area (stand BA) relative to the climatically determined potential basal area. Using linear mixed effects modeling, we found that the main effects of climatic productivity, tree size, and competition explained 26.5% of the deviance in individual tree growth, but adding interactions to the model could explain a further 8.9%. The effect of competition on growth interacts with the gradient of climatic productivity, with negligible effect of competition in low productivity environments, but marked negative effects at the most productive sites. We also found a positive interaction between tree size and stand BA, which was most pronounced in the most productive sites. We interpret these patterns as reflecting intense competition for light amongst maturing trees on more productive sites, and below ground moisture limitation at low productivity sites, which results in open stands with little competition for light. These trends are consistent with the life history and stand development of eucalypt forests: in cool moist environments, light is the most limiting resource, resulting in size-asymmetric competition, while in hot, low rainfall environments are open forests with little competition for light but where the amount of tree regeneration is limited by water availability. PMID:24926304

Coupled C, N and P Controls on Photosynthesis, Primary Production and Decomposition across a Land Use Intensification Gradient and Implications for Land Atmosphere C Exchange

NASA Astrophysics Data System (ADS)

Reinsch, S.; Emmett, B.; Cosby, J.; Mercado, L. M.; Smart, S.; Glanville, H.; Alberola, M. B.; Clark, D.; Robinson, E.; Jones, D.

2015-12-01

The coupling of C, N and P cycles has rarely been studied through the air- land-water continuum. This is essential if we are to enhance land-atmosphere models to account for N and P limitations. It is also important for developing integrated catchment management solutions to deliver improved water quality combined with a wide range of other ecosystem functions and services.We present results from a project which is part of the interdisciplinary pan-UK NERC Macronutrient Cycles Programme (macronutrient-cycles.ouce.ox.ac.uk/). Our aim is to quantify how coupled C, N & P cycles change across a land use intensification gradient from arable to grass, woodland and bog ecosystems and identify the implications for land-atmosphere C exchange. We focus on three key processes; photosynthesis, annual net primary productivity (ANPP) and decomposition and explore their consequences for biodiversity. Other aspects of the project track delivery to, and transformations within, the freshwater and coastal systems. When we explore relationships between C, N and P, results indicate all habitat types fall on a single land use intensification gradient. Stoichiometry suggests plant productivity is primarily N limited. P limitation occurs rarely but at all levels of intensification. Soil priming shows our soils are primarily C limited and, surprisingly, soil acidity provides one of the most powerful single predictors of processes and ecosystem services perhaps as it is a good integrator of many soil properties. Incorporating this knowledge into the UK land-atmosphere model JULES will be used to improve ANPP projections. These will then be used as inputs into a plant species model called MULTIMOVE to enable future scenarios of climate change, land use and air pollution on habitat suitability for > 1400 plant species to be explored. The enhanced Jules model will ensure both N and P limitations on C fluxes from above and below-ground are incorporated into future UK scenario applications.

Coupled C, N and P controls on photosynthesis, primary production and decomposition across a land use intensification gradient and implications for land atmosphere C exchange

NASA Astrophysics Data System (ADS)

Reinsch, Sabine; Glanville, Helen; Smart, Simon; Jones, Davey; Mercado, Lina; Blanes-Alberola, Mamen; Cosby, Jack; Emmett, Bridget

2016-04-01

The coupling of C, N and P cycles has rarely been studied through the air- land-water continuum. This is essential if we are to enhance land-atmosphere models to account for N and P limitations. It is also important for developing integrated catchment management solutions to deliver improved water quality combined with a wide range of other ecosystem functions and services. We present results from a project which is part of the interdisciplinary pan-UK NERC Macronutrient Cycles Programme (macronutrient-cycles.ouce.ox.ac.uk/). Our aim is to quantify how coupled C, N & P cycles change across a land use intensification gradient from arable to grass, woodland and bog ecosystems and identify the implications for land-atmosphere C exchange. We focus on three key processes; photosynthesis, annual net primary productivity and decomposition and explore their consequences for biodiversity. Other aspects of the project track delivery to, and transformations within, the freshwater and coastal systems. When we explore relationships between C, N and P, results indicate all habitat types fall on a single land use intensification gradient. Stoichiometry suggests plant productivity is primarily N limited. P limitation occurs rarely but at all levels of intensification. Soil priming shows our soils are primarily C limited and, surprisingly, soil acidity provides one of the most powerful single predictors of processes and ecosystem services perhaps as it is a good integrator of many soil properties. Incorporating this knowledge into the UK land-atmosphere model JULES will improve aNPP projections. These are then being used as inputs into a plant species model called MULTIMOVE to enable future scenarios of climate change, land use and air pollution on habitat suitability for > 1400 plant species to be explored. The enhanced Jules model will ensure both N and P limitations on C fluxes from above and below-ground are incorporated into future UK scenario applications.

Distinct T helper cell dependence of memory B-cell proliferation versus plasma cell differentiation.

PubMed

Zabel, Franziska; Fettelschoss, Antonia; Vogel, Monique; Johansen, Pål; Kündig, Thomas M; Bachmann, Martin F

2017-03-01

Several memory B-cell subclasses with distinct functions have been described, of which the most effective is the class-switched (CS) memory B-cell population. We have previously shown, using virus-like particles (VLPs), that the proliferative potential of these CS memory B cells is limited and they fail to re-enter germinal centres (GCs). However, VLP-specific memory B cells quickly differentiated into secondary plasma cells (PCs) with the virtue of elevated antibody production compared with primary PCs. Whereas the induction of VLP + memory B cells was strongly dependent on T helper cells, we were wondering whether re-stimulation of VLP + memory B cells and their differentiation into secondary PCs would also require T helper cells. Global absence of T helper cells led to strongly impaired memory B cell proliferation and PC differentiation. In contrast, lack of interleukin-21 receptor-dependent follicular T helper cells or CD40 ligand signalling strongly affected proliferation of memory B cells, but differentiation into mature secondary PCs exhibiting increased antibody production was essentially normal. This contrasts with primary B-cell responses, where a strong dependence on CD40 ligand but limited importance of interleukin-21 receptor was seen. Hence, T helper cell dependence differs between primary and secondary B-cell responses as well as between memory B-cell proliferation and PC differentiation. © 2016 John Wiley & Sons Ltd.

The Irony of Iron – Biogenic Iron Oxides as an Iron Source to the Ocean

PubMed Central

Emerson, David

2016-01-01

Primary productivity in at least a third of the sunlit open ocean is thought to be iron-limited. Primary sources of dissolved iron (dFe) to the ocean are hydrothermal venting, flux from the sediments along continental margins, and airborne dust. This article provides a general review of sources of hydrothermal and sedimentary iron to the ocean, and speculates upon the role that iron-cycling microbes play in controlling iron dynamics from these sources. Special attention is paid to iron-oxidizing bacteria (FeOB) that live by oxidizing iron and producing biogenic iron oxides as waste products. The presence and ubiquity of FeOB both at hydrothermal systems and in sediments is only beginning to be appreciated. The biogenic oxides they produce have unique properties that could contribute significantly to the dynamics of dFe in the ocean. Changes in the physical and chemical characteristics of the ocean due to climate change and ocean acidification will undoubtedly impact the microbial iron cycle. A better understanding of the contemporary role of microbes in the iron cycle will help in predicting how these changes could ultimately influence marine primary productivity. PMID:26779157

Benthic Foraminifera, Food in the Deep Sea, and Limits to Bentho-Pelagic Coupling

NASA Astrophysics Data System (ADS)

Thomas, E.; Boscolo-Galazzo, F.; Arreguin-Rodrigu, G. J.; Ortiz, S.; Alegret, L.

2015-12-01

The deep-sea is the largest habitat on Earth, contains highly diverse biota, but is very little known. Many of its abundant benthic biota (e.g., nematodes) are not preserved in the fossil record. Calcareous and agglutinated benthic foraminifera (unicellular eukaryotes, Rhizaria; efficient dispersers) and ostracodes (Animalia, Crustacea; non-efficient dispersers) are the most common organisms providing a fossil record of deep-sea environments. Very little food is supplied to the deep-sea, because organic matter produced by photosynthesis is largely degraded before it arrives at the seafloor. Only a few % of organic matter is carried to the ocean bottom by 'marine snow', with its particle size and behavior in the water column controlled by surface ecosystem structure, including type of dominant primary producers (diatoms, cyanobacteria). Food supply and its seasonality are generally seen as the dominant control on benthic assemblages (combined with oxygenation), providing bentho-pelagic coupling between primary and benthic productivity. Benthic foraminiferal assemblages (composition and density) thus are used widely to estimate past productivity, especially during episodes of global climate change, ocean acidification, and mass extinction of primary producers. We show that some environmental circumstances may result in interrupting bentho-pelagic coupling, e.g. through lateral supply of organic matter along continental margins (adding more refractory organic matter), through trophic focusing and/or fine particle winnowing on seamounts (giving an advantage to suspension feeders), and through carbonate undersaturation (giving advantage to infaunal over epifaunal calcifyers). In addition, increased remineralization of organic matter combined with increased metabolic rates may cause assemblages to reflect more oligotrophic conditions at stable primary productivity during periods of global warming. As a result, benthic foraminiferal accumulation rates must be carefully evaluated before use as proxies for primary productivity.

Emollient treatment of atopic dermatitis: latest evidence and clinical considerations

PubMed Central

Kung, Jeng Sum Charmaine; Ng, Wing Gi Gigi; Leung, Ting Fan

2018-01-01

Aim To review current classes of emollients in the market, their clinical efficacy in atopic dermatitis (AD) and considerations for choice of an emollient. Methods PubMed Clinical Queries under Clinical Study Categories (with Category limited to Therapy and Scope limited to Narrow) and Systematic Reviews were used as the search engine. Keywords of ‘emollient or moisturizer’ and ‘atopic dermatitis’ were used. Overview of findings Using the keywords of ‘emollient’ and ‘atopic dermatitis’, there were 105 and 36 hits under Clinical Study Categories (with Category limited to Therapy and Scope limited to Narrow) and Systematic Reviews, respectively. Plant-derived products, animal products and special ingredients were discussed. Selected proprietary products were tabulated. Conclusions A number of proprietary emollients have undergone trials with clinical data available on PubMed-indexed journals. Most moisturizers showed some beneficial effects, but there was generally no evidence that one moisturizer is superior to another. Choosing an appropriate emollient for AD patients would improve acceptability and adherence for emollient treatment. Physician’s recommendation is the primary consideration for patients when selecting a moisturizer/emollient; therefore, doctors should provide evidence-based information about these emollients. PMID:29692852

Evidence for a Limited-Cascading Account of Written Word Naming

ERIC Educational Resources Information Center

Bonin, Patrick; Roux, Sebastien; Barry, Christopher; Canell, Laura

2012-01-01

We address the issue of how information flows within the written word production system by examining written object-naming latencies. We report 4 experiments in which we manipulate variables assumed to have their primary impact at the level of object recognition (e.g., quality of visual presentation of pictured objects), at the level of semantic…

40 CFR 421.143 - Effluent limitations guidelines representing the degree of effluent reduction attainable by the...

Code of Federal Regulations, 2010 CFR

2010-07-01

... (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS NONFERROUS METALS MANUFACTURING POINT SOURCE CATEGORY Primary... sodium antimonate product Antimony 30.150 13.440 Arsenic 21.720 9.687 Mercury 2.344 0.937 (b) Fouled... any 1 day Maximum for monthly average mg/kg pounds per million pounds of antimony metal produced by...

Short-term variability in labile soil phosphorus is positively related to soil moisture in a humid tropical forest in Puerto Rico

Treesearch

Tana E. Wood; Danielle Matthews; Karen Vandecar; Deborah Lawrence

2016-01-01

Primary productivity in tropical forests is often considered limited by phosphorus (P) availability. Microbial activity is a key regulator of available P through organic matter decomposition (supply) as well as microbial immobilization (depletion). Environmental conditions, such as soil moisture and temperature can fluctuate...

Maize ZmALMT2 is a root anion transporter that mediates constitutive root malate efflux

USDA-ARS?s Scientific Manuscript database

Aluminum (Al) toxicity is a primary limitation to crop productivity on acid soils throughout the plant. Root efflux of organic acid anions constitutes a mechanism by which plants cope with toxic aluminum (Al) ions on acid soils. In this study, we have characterized ZmALMT2 (a member of aluminum-acti...

Beet curly top virus strains associated with sugar beet in Idaho, Oregon, and a survey collection

USDA-ARS?s Scientific Manuscript database

Curly top of sugar beet is a serious yield limiting disease in semi-arid production areas caused by Beet curly top virus (BCTV) and vectored by the beet leafhopper (Circulifer tennellus). The primary means of control for BCTV is host resistance, but effectiveness of resistance can vary among BCTV s...

The value of versatile alley cropping in the Southeast US: A Monte Carlo simulation

Treesearch

Michael A. Cary; Gregory E. Frey; D. Evan Mercer

2014-01-01

Alley cropping offers a potential alternative to traditional land management practices. However, its implementation in the United States is extremely limited and general awareness and knowledge of alley cropping is lacking. While alley cropping does have a few barriers to entry, the cost of maintaining hedgerow products and foregone returns from primary crops...

[The prevention of Ochratossina A (OTA A) in the wine].

PubMed

Alonzo, Elena; Cafarella, Nicola; Duplicato, Giovanni; Maugeri, Antonio; Platania, Francesco; Raciti, Claudio; Fardella, Maristella

2008-01-01

The expansion of global market has recalled more and more the attention of the researchers on the presence of mycotoxins in the foodstuff. Trying to limit the damages to the health and the correlated economic losses the European Community has legislated fixing more restrictive limits for the presence of mycotoxins in the single food products; and, specifically the limits of presence of Ochratoxin A (OTA A) in the wines have been established by the rule EEC 123 / 2005. With the purpose to prevent the formation of OTA á in the wine (from the grape to the bottled product), has been conducted, a study to compare the different techniques currently used, as the Good Agricultural Practices (BPA), the Good Practices of Manufacture (BPF) and the Good Practices of storage (BPS) with the system of Hazard Analysis Critical Control Points (HACCP), nowadays used only from the begin of the phase of processing of the agricultural products. It results that, concerning the BPAs, the application of the System HACCP on the primary production would bring neither some innovation nor qualitative improvement. The comparison among BPF, BPS and HACCP, confirms, instead, as the HACCP allows to individualize a series of additional critical points worth of attention during the process and maintenance of the grapes. Such result is in agreement with the new community rule 852/2004, which, also because the difficulties in the application of the HACCP to the primary production, confirm the necessity to follow, on the field, the hygienic respect of the sanitary measures (see attached one artt. 5- 6). This involves the necessity of an increasing integration and cooperation among different professional workers (as hygienist and agronomist). That kind of cooperation is already in use (from year 2003), within the "progetto fito", started by the AUSL 3 of Catania, with the coordination of the Service Hygiene Food stuff and Nutrition (SIAN).

Interactions between atmospheric circulation, nutrient deposition, and tropical forest primary production (Invited)

NASA Astrophysics Data System (ADS)

Randerson, J. T.; Chen, Y.; Rogers, B. M.; Morton, D. C.; van der Werf, G.; Mahowald, N. M.

2010-12-01

Tropical forests influence regional and global climate by means of several pathways, including by modifying surface energy exchange and by forming clouds. High levels of precipitation, leaching, and soil weathering limit nutrient availability in these ecosystems. Phosphorus (P) is a key element limiting net primary production, and in some areas, including forests recovering from prior disturbance, nitrogen (N) also may limit some components of production. Here we quantified atmospheric P and N inputs to these forests from fires using satellite-derived estimates of emissions and atmospheric models. In Africa and South America, cross-biome transport of fire-emitted aerosols and reactive N gases from savannas and areas near the deforestation frontier increased deposition of P and N in interior forests. Equatorward atmospheric transport during the dry (fire) season in one hemisphere was linked with surface winds moving toward the inter-tropical convergence zone (ITCZ) in the other hemisphere. Deposition levels were higher in tropical forests in Africa than in South America because of large savanna areas with high levels of fire emissions in both southern and northern Africa. We conclude by describing a potential feedback loop by which equatorward transport of fire emissions, dust, and spores sustains the productivity of tropical forests. We specifically assessed evidence that savanna-to-forest atmospheric transport of nutrients increases forest productivity, height, and rates of evapotranspiration (ET). In parallel, we examined the degree to which increases in ET and surface roughness in tropical forests have the potential to strengthen several components of the Hadley circulation, including deep convection, equatorward return flow (near the surface), and the intensity of seasonal drought in the subtropics (thereby increasing fires). These interactions are important for understanding biogeochemical - climate interactions on millennial timescales and for quantifying how contemporary changes in fire activity and land use are changing the global carbon cycle.

Decellularized extracellular matrices produced from immortal cell lines derived from different parts of the placenta support primary mesenchymal stem cell expansion

PubMed Central

Kusuma, Gina D.; Brennecke, Shaun P.; O’Connor, Andrea J.; Kalionis, Bill

2017-01-01

Mesenchymal stem/stromal cells (MSCs) exhibit undesired phenotypic changes during ex vivo expansion, limiting production of the large quantities of high quality primary MSCs needed for both basic research and cell therapies. Primary MSCs retain many desired MSC properties including proliferative capacity and differentiation potential when expanded on decellularized extracellular matrix (dECM) prepared from primary MSCs. However, the need to use low passage number primary MSCs (passage 3 or lower) to produce the dECM drastically limits the utility and impact of this technology. Here, we report that primary MSCs expanded on dECM prepared from high passage number (passage 25) human telomerase reverse transcriptase (hTERT) transduced immortal MSC cell lines also exhibit increased proliferation and osteogenic differentiation. Two hTERT-transduced placenta-derived MSC cell lines, CMSC29 and DMSC23 [derived from placental chorionic villi (CMSCs) and decidua basalis (DMSCs), respectively], were used to prepare dECM-coated substrates. These dECM substrates showed structural and biochemical differences. Primary DMSCs cultured on dECM-DMSC23 showed a three-fold increase in cell number after 14 days expansion in culture and increased osteogenic differentiation compared with controls. Primary CMSCs cultured on the dECM-DMSC23 exhibited a two-fold increase in cell number and increased osteogenic differentiation. We conclude that immortal MSC cell lines derived from different parts of the placenta produce dECM with varying abilities for supporting increased primary MSC expansion while maintaining important primary MSC properties. Additionally, this is the first demonstration of using high passage number cells to produce dECM that can promote primary MSC expansion, and this advancement greatly increases the feasibility and applicability of dECM-based technologies. PMID:28152107

Decellularized extracellular matrices produced from immortal cell lines derived from different parts of the placenta support primary mesenchymal stem cell expansion.

PubMed

Kusuma, Gina D; Brennecke, Shaun P; O'Connor, Andrea J; Kalionis, Bill; Heath, Daniel E

2017-01-01

Mesenchymal stem/stromal cells (MSCs) exhibit undesired phenotypic changes during ex vivo expansion, limiting production of the large quantities of high quality primary MSCs needed for both basic research and cell therapies. Primary MSCs retain many desired MSC properties including proliferative capacity and differentiation potential when expanded on decellularized extracellular matrix (dECM) prepared from primary MSCs. However, the need to use low passage number primary MSCs (passage 3 or lower) to produce the dECM drastically limits the utility and impact of this technology. Here, we report that primary MSCs expanded on dECM prepared from high passage number (passage 25) human telomerase reverse transcriptase (hTERT) transduced immortal MSC cell lines also exhibit increased proliferation and osteogenic differentiation. Two hTERT-transduced placenta-derived MSC cell lines, CMSC29 and DMSC23 [derived from placental chorionic villi (CMSCs) and decidua basalis (DMSCs), respectively], were used to prepare dECM-coated substrates. These dECM substrates showed structural and biochemical differences. Primary DMSCs cultured on dECM-DMSC23 showed a three-fold increase in cell number after 14 days expansion in culture and increased osteogenic differentiation compared with controls. Primary CMSCs cultured on the dECM-DMSC23 exhibited a two-fold increase in cell number and increased osteogenic differentiation. We conclude that immortal MSC cell lines derived from different parts of the placenta produce dECM with varying abilities for supporting increased primary MSC expansion while maintaining important primary MSC properties. Additionally, this is the first demonstration of using high passage number cells to produce dECM that can promote primary MSC expansion, and this advancement greatly increases the feasibility and applicability of dECM-based technologies.

Regional Application of an Ecosystem Production Model for Studies of Biogeochemistry in the...

NASA Technical Reports Server (NTRS)

Potter, C. S.; Klooster, S.; Brooks, V.; Peterson, David L. (Technical Monitor)

1997-01-01

The degree to which primary production, soil carbon, and trace gas fluxes in tropical forests of the Amazon are limited by moisture availability and other environmental factors was examined using an ecosystem modeling application for the country of Brazil. A regional geographic information system (GIS) serves as the data source of climate drivers, satellite images, land cover, and soil properties for input to the NASA Ames-CASA (Carnegie-Ames-Stanford Approach) model over a 8-km grid resolution. Simulation results supports the hypothesis that net primary production (NPP) is limited by cloud interception of solar radiation over the humid northwestern portion of the region. Peak annual rates for NPP of nearly 1.4 kg C m-2yr -1are localized in the seasonally dry eastern Amazon in areas that we assume are primarily deep-rooted evergreen forest cover. Regional effects of forest conversion on NPP and soil carbon content are indicated in the model results, especially in seasonally dry areas. Comparison of model flux predictions along selected eco-climatic transects reveal moisture, soil, and land use controls on gradients of ecosystem production and soil trace gas emissions (CO2, N2O, and NO). These results are used to formulate a series of research hypotheses for testing in the next phase of regional modeling, which includes recalibration of the light-use efficiency term in CASA using field measurements of NPP, and refinements of vegetation index and soil property (texture and potential rooting depth) maps for the region.

ORAL ADMINISTRATION OF EXOGENOUS LACTASE IN TABLETS FOR PATIENTS DIAGNOSED WITH LACTOSE INTOLERANCE DUE TO PRIMARY HYPOLACTASIA.

PubMed

Francesconi, Carlos Fernando de Magalhães; Machado, Marta Brenner; Steinwurz, Flavio; Nones, Rodrigo Bremer; Quilici, Flávio Antonio; Catapani, Wilson Roberto; Miszputen, Sender Jankiel; Bafutto, Mauro

2016-01-01

Primary hypolactasia is a common condition where a reduced lactase activity in the intestinal mucosa is present. The presence of abdominal symptoms due to poor absorption of lactose, which are present in some cases, is a characteristic of lactose intolerance. Evaluate the efficacy of a product containing exogenous lactase in tablet form compared to a reference product with proven effectiveness in patients with lactose intolerance. Multicentre, randomized, parallel group, single-blind, comparative non-inferiority study. One hundred twenty-nine (129) adult lactose intolerance patients with hydrogen breath test results consistent with a diagnosis of hypolactasia were randomly assigned to receive the experimental product (Perlatte(r) - Eurofarma Laboratórios S.A.) or the reference product (Lactaid(r) - McNeilNutritionals, USA) orally (one tablet, three times per day) for 42 consecutive days. Data from 128 patients who actually received the studied treatments were analysed (66 were treated with the experimental product and 62 with the reference product). The two groups presented with similar baseline clinical and demographic data. Mean exhaled hydrogen concentration tested at 90 minutes after the last treatment (Day 42) was significantly lower in the experimental product treated group (17±18 ppm versus 34±47 ppm) in the per protocol population. The difference between the means of the two groups was -17 ppm (95% confidence interval [95% CI]: -31.03; -3.17). The upper limit of the 95% CI did not exceed the a priori non-inferiority limit (7.5 ppm). Secondary efficacy analyses confirmed that the treatments were similar (per protocol and intention to treat population). The tolerability was excellent in both groups, and there were no reports of serious adverse events related to the study treatment. The experimental product was non-inferior to the reference product, indicating that it was an effective replacement therapy for endogenous lactase in lactose intolerance patients.

Retrieval of daily gross primary production over Europe and Africa from an ensemble of SEVIRI/MSG products

NASA Astrophysics Data System (ADS)

Martínez, B.; Sanchez-Ruiz, S.; Gilabert, M. A.; Moreno, A.; Campos-Taberner, M.; García-Haro, F. J.; Trigo, I. F.; Aurela, M.; Brümmer, C.; Carrara, A.; De Ligne, A.; Gianelle, D.; Grünwald, T.; Limousin, J. M.; Lohila, A.; Mammarella, I.; Sottocornola, M.; Steinbrecher, R.; Tagesson, T.

2018-03-01

The main goal of this paper is to derive a method for a daily gross primary production (GPP) product over Europe and Africa taking the full advantage of the SEVIRI/MSG satellite products from the European Organization for the Exploitation of Meteorological Satellites (EUMETSAT) sensors delivered from the Satellite Application Facility for Land Surface Analysis (LSA SAF) system. Special attention is paid to model the daily GPP response from an optimized Montheith's light use efficiency model under dry conditions by controlling water shortage limitations from the actual evapotranspiration and the potential evapotranspiration (PET). The PET was parameterized using the mean daily air temperature at 2 m (Ta) from ERA-Interim data. The GPP product (MSG GPP) was produced for 2012 and assessed by direct site-level comparison with GPP from eddy covariance data (EC GPP). MSG GPP presents relative bias errors lower than 40% for the most forest vegetation types with a high agreement (r > 0.7) when compared with EC GPP. For drylands, MSG GPP reproduces the seasonal variations related to water limitation in a good agreement with site level GPP estimates (RMSE = 2.11 g m-2 day-1; MBE = -0.63 g m-2 day-1), especially for the dry season. A consistency analysis against other GPP satellite products (MOD17A2 and FLUXCOM) reveals a high consistency among products (RMSD < 1.5 g m-2 day-1) over Europe, North and South Africa. The major GPP disagreement arises over moist biomes in central Africa (RMSD > 3.0 g m-2 day-1) and over dry biomes with MSG GPP estimates lower than FLUXCOM (MBD up to -3.0 g m-2 day-1). This newly derived product has the potential for analysing spatial patterns and temporal dynamics of GPP at the MSG spatial resolutions on a daily basis allowing to better capture the GPP dynamics and magnitude.

A water-quality reconnaissance of Big Bear Lake, San Bernardino County, California, 1972-1973

USGS Publications Warehouse

Irwin, George A.; Lemons, Michael

1974-01-01

A water-quality reconnaissance study of the Big Bear Lake area in southern California was made by the U.S. Geological Survey from April 1972 through April 1973. The primary purpose of the study was to measure the concentration and distribution of selected primary nutrients, organic carbon, dissolved oxygen, phytoplankton, and water temperature in the lake. Estimates of the nitrogen, phosphorus, and silica loading to the lake from surface-water tributaries and precipitation were also made.Results of the study indicate that Big Bear Lake is moderately eutrophic, at least in regard to nitrogen, phosphorus, and organic content. Nitrate was found in either trace concentrations or below detectable limits; however, ammonia nitrogen was usually detected in concentrations greater than 0.05 milligrams per liter. Orthophosphate phosphorus was detected in mean concentrations ranging from 0.01 to 0.05 milligrams per liter. Organic nitrogen and phosphorus were also detected in measurable concentrations.Seasonal levels of dissolved oxygen indicated that the nutrients and other controlling factors were optimum for relatively high primary productivity. However, production varied both seasonally and areally in the lake. Primary productivity seemed highest in the eastern and middle parts of the lake. The middle and western parts of the lake exhibited severe oxygen deficits in the deeper water during the warmer summer months of June and July 1972.

Assessing Phytoplankton Nutritional Status and Potential Impact of Wet Deposition in Seasonally Oligotrophic Waters of the Mid-Atlantic Bight

NASA Astrophysics Data System (ADS)

Sedwick, P. N.; Bernhardt, P. W.; Mulholland, M. R.; Najjar, R. G.; Blumen, L. M.; Sohst, B. M.; Sookhdeo, C.; Widner, B.

2018-04-01

To assess phytoplankton nutritional status in seasonally oligotrophic waters of the southern Mid-Atlantic Bight, and the potential for rain to stimulate primary production in this region during summer, shipboard bioassay experiments were performed using natural seawater and phytoplankton collected north and south of the Gulf Stream. Bioassay treatments comprised iron, nitrate, iron + nitrate, iron + nitrate + phosphate, and rainwater. Phytoplankton growth was inferred from changes in chlorophyll a, inorganic nitrogen, and carbon-13 uptake, relative to unamended control treatments. Results indicated the greatest growth stimulation by iron + nitrate + phosphate, intermediate growth stimulation by rainwater, modest growth stimulation by nitrate and iron + nitrate, and no growth stimulation by iron. Based on these data and analysis of seawater and atmospheric samples, nitrogen was the proximate limiting nutrient, with a secondary limitation imposed by phosphorus. Our results imply that summer rain events increase new production in these waters by contributing nitrogen and phosphorus, with the availability of the latter setting the upper limit on rain-stimulated new production.

The theoretical limit to plant productivity.

PubMed

DeLucia, Evan H; Gomez-Casanovas, Nuria; Greenberg, Jonathan A; Hudiburg, Tara W; Kantola, Ilsa B; Long, Stephen P; Miller, Adam D; Ort, Donald R; Parton, William J

2014-08-19

Human population and economic growth are accelerating the demand for plant biomass to provide food, fuel, and fiber. The annual increment of biomass to meet these needs is quantified as net primary production (NPP). Here we show that an underlying assumption in some current models may lead to underestimates of the potential production from managed landscapes, particularly of bioenergy crops that have low nitrogen requirements. Using a simple light-use efficiency model and the theoretical maximum efficiency with which plant canopies convert solar radiation to biomass, we provide an upper-envelope NPP unconstrained by resource limitations. This theoretical maximum NPP approached 200 tC ha(-1) yr(-1) at point locations, roughly 2 orders of magnitude higher than most current managed or natural ecosystems. Recalculating the upper envelope estimate of NPP limited by available water reduced it by half or more in 91% of the land area globally. While the high conversion efficiencies observed in some extant plants indicate great potential to increase crop yields without changes to the basic mechanism of photosynthesis, particularly for crops with low nitrogen requirements, realizing such high yields will require improvements in water use efficiency.

Design for Manufacture and Assembly for Product Development (Case study : Emergency Lamp)

NASA Astrophysics Data System (ADS)

Ngatilah, Y.; Pulansari, F.; Ernawati, Dira; Pujiastuti, C.; Parwati, C. I.; Prasetyo, B.

2018-01-01

Community needs that are not primary but important in everyday life are lights for lighting. State electricity company (PLN) is experiencing limitations in supplying electricity for this puIDRose. Therefore emergency lights (emergency lights) are already marketed in the community, which limited function only illuminate a very limited space. Therefore we developed the design of energy saving lamps using “Light Emitting Diode” (LED) which can illuminate the whole house as well as functioning as mobile phone charger (HP). The method used is Design for Manufacture and Assembly (DFMA), with the result of design development The percentage increase in assembly efficiency (E) is 0.01071 - 0.00645 = 0.00426 or = 39.76%. The decrease in material costs is IDR 234,000 - IDR 214,000 = IDR 20,000 or = 8.54% .Development design is received because of more assembly efficiency than the initial design. Power usage on previous products with series and designs of the original product can last only 4-5 hours non-stop, while the development of the design can survive 9-10 hours 2x more energy efficient.

How drought severity constrains gross primary production(GPP) and its partitioning among carbon pools in a Quercus ilex coppice?

NASA Astrophysics Data System (ADS)

Rambal, S.; Lempereur, M.; Limousin, J. M.; Martin-StPaul, N. K.; Ourcival, J. M.; Rodríguez-Calcerrada, J.

2014-12-01

The partitioning of photosynthates toward biomass compartments plays a crucial role in the carbon (C) sink function of forests. Few studies have examined how carbon is allocated toward plant compartments in drought-prone forests. We analyzed the fate of gross primary production (GPP) in relation to yearly water deficit in an old evergreen Mediterranean Quercus ilex coppice severely affected by water limitations. Carbon fluxes between the ecosystem and the atmosphere were measured with an eddy covariance flux tower running continuously since 2001. Discrete measurements of litterfall, stem growth and fAPAR allowed us to derive annual productions of leaves, wood, flowers and acorns, and an isometric relationship between stem and belowground biomass has been used to estimate perennial belowground growth. By combining eddy covariance fluxes with annual net primary productions (NPP), we managed to close a C budget and derive values of autotrophic, heterotrophic respirations and carbon-use efficiency (CUE; the ratio between NPP and GPP). Average values of yearly net ecosystem production (NEP), GPP and Reco were 282, 1259 and 977 g C m-2. The corresponding aboveground net primary production (ANPP) components were 142.5, 26.4 and 69.6 g C m-2 for leaves, reproductive effort (flowers and fruits) and stems, respectively. NEP, GPP and Reco were affected by annual water deficit. Partitioning to the different plant compartments was also impacted by drought, with a hierarchy of responses going from the most affected - the stem growth - to the least affected - the leaf production. The average CUE was 0.40, which is well in the range for Mediterranean-type forest ecosystems. CUE tended to decrease less drastically in response to drought than GPP and NPP did, probably due to drought acclimation of autotrophic respiration. Overall, our results provide a baseline for modeling the inter-annual variations of carbon fluxes and allocation in this widespread Mediterranean ecosystem, and they highlight the value of maintaining continuous experimental measurements over the long term.

Hydrogen production by Cyanobacteria

PubMed Central

Dutta, Debajyoti; De, Debojyoti; Chaudhuri, Surabhi; Bhattacharya, Sanjoy K

2005-01-01

The limited fossil fuel prompts the prospecting of various unconventional energy sources to take over the traditional fossil fuel energy source. In this respect the use of hydrogen gas is an attractive alternate source. Attributed by its numerous advantages including those of environmentally clean, efficiency and renew ability, hydrogen gas is considered to be one of the most desired alternate. Cyanobacteria are highly promising microorganism for hydrogen production. In comparison to the traditional ways of hydrogen production (chemical, photoelectrical), Cyanobacterial hydrogen production is commercially viable. This review highlights the basic biology of cynobacterial hydrogen production, strains involved, large-scale hydrogen production and its future prospects. While integrating the existing knowledge and technology, much future improvement and progress is to be done before hydrogen is accepted as a commercial primary energy source. PMID:16371161

Overview of measles and mumps vaccine: origin, present, and future of vaccine production.

PubMed

Betáková, T; Svetlíková, D; Gocník, M

2013-01-01

Measles and mumps are common viral childhood diseases that can cause serious complications. Vaccination remains the most efficient way to control the spread of these viruses. The manufacturing capability for viral vaccines produced in embryonated hen eggs and conventional/classical cell substrates, such as chicken embryo fibroblast or primary dog kidney cell substrates, is no longer sufficient. This limitation can be overcome by utilizing other recognized cell substrates such as Madin Darby Canine Kidney (MDCK), Chinese Hamster Ovary (CHO), Vero (monkey origin) cells, MRC-5 (human diploid) or as an alternative, introducing new cell substrates of human or avian origin. A very important factor in vaccine production is the safety and immunogenicity of the final vaccine, where the proper choice of cell substrate used for virus propagation is made. All substrates used in vaccine production must be fully characterized to avoid the contamination of hidden unknown pathogens which is difficult to achieve in primary cell substrates.

Phytoplankton Productivity numerical model: calibration via laboratory cultures

NASA Astrophysics Data System (ADS)

Zavatarelli, Marco; fiori, Emanuela; Carolina, Amadio

2017-04-01

The primary production module of the "Biogeochemical Flux Model" (BFM) has been used to replicate results from laboratory phytoplankton cultures of diatoms, dinoflagellates and picophytoplankton. The model explicitly solve for the phytoplankton, chlorophyll, carbon, phosphorus, nitrogen and (diatoms only) silicon content. Simulations of the temporal evolution of the cultured phytoplankton biomass, have been carried out in order to provide a correct parameterization of the temperature role in modulating the growth dynamics, and to gain insight in the process of chlorophyll turnover, with particular reference to the phytoplankton biomass decay in condition of nutrient stress. Results highligthed some limitation of the Q10 approach in defining the temperature constraints on the primary production (particularly at relatively high temperature) This required a modification of such approach. Moreover, the decay of the chlorophyll concentration under nutrient stress, appeared (as expected) significantly decoupled from the evolution of the carbon content. The implementation of a specific procedure (based on the laboratory culture results) adressing such decoupling, allowed for the achievement of better agreement between model and observations.

Can phytoplankton maintain a positive carbon balance in a turbid, freshwater, tidal estuary

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cole, J.J.; Caraco, N.F.; Peierls, B.L.

1992-12-01

An analysis of phytoplankton primary production in the tidal freshwater portion of the Hudson River estuary suggests that net primary production is strongly limited by light and mixing regime. In this turbid, well-mixed system, cells spend from 18 to 22 h d[sup [minus]1] below the 1% light level. Autotrophic dark respiration, conservatively estimated at 5% of P[sup b][sub max], is of sufficient magnitude to make positive algal growth impossible over much of the river and much of the year. It is particularly difficult to explain the observed increase in algal biomass during blooms in spring and summer. The authors hypothesizemore » that such blooms can occur only in a small fraction of the river where depth is [approx lt]4 m. 32 refs., 10 figs.« less

Synoptic events force biological productivity in Patagonian fjord ecosystems

NASA Astrophysics Data System (ADS)

Daneri, Giovanni

2016-04-01

The annual cycle of primary productivity of the Patagonian fjords has, to date, been described as a two phase system consisting of a short non productive winter phase (during June and July) and a productive phase extending from late winter (August) to autumn (May). Low levels of primary production, phytoplankton biomass and high concentrations of surface nutrients have been described as characterizing winter conditions while pulsed productivity events typifies the productivity pattern during the extended productive season. Pulsed productivity events characterize coastal waters where inorganic nutrients in surface layers are replenished following periods of intensive utilization by autotrophs. Freshwater input in Patagonian fjords in southern Chile (41-55°S) results in one of the largest estuarine regions worldwide. Here strong haline water column stratification prevents nutrient mixing to the surface layers thus potentially shutting off algal production. Our working hypothesis considered that in order to reconcile the observed pulsed productivity pattern, periodic breaking (associated to surface nutrient replenishment) and re-establishment of estuarine conditions (associated to water column stratification) would be required. Up to now however our understanding of the physical processes that control water column conditions in the Patagonian fjord area has been extremely limited. Here we present evidence linking the passage of synoptic low pressure fronts to pulsed productivity events in the Patagonian fjord area. These front controls and influence local processes of interaction between the fjord and the atmosphere generating a rapid water column response. In the specific case of the Puyuhuapi fjord we have been able to show that such synoptic fronts induce surface flow reversal and water column mixing. Phytoplankton blooming occurs after the passage of the synoptic front once calmer conditions prevail and estuarine conditions are re established. The occurrence of an extremely productive bloom of the dinoflagellate Heterocapsa sp. in July 2014, after the passage of a synoptic low pressure front provided, for the first time, strong evidence that phytoplankton blooming in the Patagonian fjord ecosystems is controlled by synoptic processes and that they are not limited by light as previously reported. This research was funded by COPAS Sur-Austral (PFB-31) and FONDECYT 1131063

Growth duration is a better predictor of stem increment than carbon supply in a Mediterranean oak forest: implications for assessing forest productivity under climate change.

PubMed

Lempereur, Morine; Martin-StPaul, Nicolas K; Damesin, Claire; Joffre, Richard; Ourcival, Jean-Marc; Rocheteau, Alain; Rambal, Serge

2015-08-01

Understanding whether tree growth is limited by carbon gain (source limitation) or by the direct effect of environmental factors such as water deficit or temperature (sink limitation) is crucial for improving projections of the effects of climate change on forest productivity. We studied the relationships between tree basal area (BA) variations, eddy covariance carbon fluxes, predawn water potential (Ψpd ) and temperature at different timescales using an 8-yr dataset and a rainfall exclusion experiment in a Quercus ilex Mediterranean coppice. At the daily timescale, during periods of low temperature (< 5°C) and high water deficit (< -1.1 MPa), gross primary productivity and net ecosystem productivity remained positive whereas the stem increment was nil. Thus, stem increment appeared limited by drought and temperature rather than by carbon input. Annual growth was accurately predicted by the duration of BA increment during spring (Δtt0-t1 ). The onset of growth (t0 ) was related to winter temperatures and the summer interruption of growth (t1 ) to a threshold Ψpd value of -1.1 MPa. We suggest that using environmental drivers (i.e. drought and temperature) to predict stem growth phenology can contribute to an improvement in vegetation models and may change the current projections of Mediterranean forest productivity under climate change scenarios. © 2015 CNRS-ADEME New Phytologist © 2015 New Phytologist Trust.

50 CFR 660.231 - Limited entry fixed gear sablefish primary fishery.

Code of Federal Regulations, 2011 CFR

2011-10-01

... sablefish primary fishery. This section applies to the sablefish primary season for the limited entry fixed... the sablefish primary season north of 36° N. lat. is governed by routine management measures imposed... sablefish primary season for the limited entry fixed gear fishery, unless at least one limited entry permit...

Lake Roosevelt Fisheries Evaluation Program; Evaluation of Limiting Factors for Stocked Kokanee and Rainbow Trout in Lake Roosevelt, Washington, 1999 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Baldwin, Casey; Polacek, Matt

2009-03-01

Hatchery supplementation of kokanee Oncorhynchus nerka and rainbow trout O. mykiss has been the primary mitigation provided by Bonneville Power Administration for loss of anadromous fish to the waters above Grand Coulee Dam (GCD). The hatchery program for rainbow trout has consistently met management goals and provided a substantial contribution to the fishery; however, spawner returns and creel survey results for kokanee have been below management goals. Our objective was to identify factors that limit limnetic fish production in Lake Roosevelt by evaluating abiotic conditions, food limitations, piscivory, and entrainment. Dissolved oxygen concentration was adequate throughout most of the year;more » however, levels dropped to near 6 mg/L in late July. For kokanee, warm water temperatures during mid-late summer limited their nocturnal distribution to 80-100 m in the lower section of the reservoir. Kokanee spawner length was consistently several centimeters longer than in other Pacific Northwest systems, and the relative weights of rainbow trout and large kokanee were comparable to national averages. Large bodied daphnia (> 1.7 mm) were present in the zooplankton community during all seasons indicating that top down effects were not limiting secondary productivity. Walleye Stizostedion vitreum were the primary piscivore of salmonids in 1998 and 1999. Burbot Lota lota smallmouth bass Micropterus dolomieui, and northern pikeminnow Ptychocheilus oregonensis preyed on salmonids to a lesser degree. Age 3 and 4 walleye were responsible for the majority (65%) of the total walleye consumption of salmonids. Bioenergetics modeling indicated that reservoir wide consumption by walleye could account for a 31-39% loss of stocked kokanee but only 6-12% of rainbow trout. Size at release was the primary reason for differential mortality rates due to predation. Entrainment ranged from 2% to 16% of the monthly abundance estimates of limnetic fish, and could account for 30% of total mortality of limnetic fishes, depending on the contribution of littoral zone fishes. Inflow to GCD forebay showed the strongest negative relationship with entrainment whereas reservoir elevation and fish vertical distribution had no direct relationship with entrainment. Our results indicate that kokanee and rainbow trout in Lake Roosevelt were limited by top down impacts including predation and entrainment, whereas bottom up effects and abiotic conditions were not limiting.« less

The impact of alternative trait-scaling hypotheses for the maximum photosynthetic carboxylation rate (Vcmax ) on global gross primary production.

PubMed

Walker, Anthony P; Quaife, Tristan; van Bodegom, Peter M; De Kauwe, Martin G; Keenan, Trevor F; Joiner, Joanna; Lomas, Mark R; MacBean, Natasha; Xu, Chongang; Yang, Xiaojuan; Woodward, F Ian

2017-09-01

The maximum photosynthetic carboxylation rate (V cmax ) is an influential plant trait that has multiple scaling hypotheses, which is a source of uncertainty in predictive understanding of global gross primary production (GPP). Four trait-scaling hypotheses (plant functional type, nutrient limitation, environmental filtering, and plant plasticity) with nine specific implementations were used to predict global V cmax distributions and their impact on global GPP in the Sheffield Dynamic Global Vegetation Model (SDGVM). Global GPP varied from 108.1 to 128.2 PgC yr -1 , 65% of the range of a recent model intercomparison of global GPP. The variation in GPP propagated through to a 27% coefficient of variation in net biome productivity (NBP). All hypotheses produced global GPP that was highly correlated (r = 0.85-0.91) with three proxies of global GPP. Plant functional type-based nutrient limitation, underpinned by a core SDGVM hypothesis that plant nitrogen (N) status is inversely related to increasing costs of N acquisition with increasing soil carbon, adequately reproduced global GPP distributions. Further improvement could be achieved with accurate representation of water sensitivity and agriculture in SDGVM. Mismatch between environmental filtering (the most data-driven hypothesis) and GPP suggested that greater effort is needed understand V cmax variation in the field, particularly in northern latitudes. © 2017 UT-Battelle LLC. New Phytologist © 2017 New Phytologist Trust.

Temperature effects on stocks and stability of a phytoplankton-zooplankton model and the dependence on light and nutrients

USGS Publications Warehouse

Norberg, J.; DeAngelis, D.L.

1997-01-01

A model of a closed phytoplankton—zooplankton ecosystem was analyzed for effects of temperature on stocks and stability and the dependence of these effects on light and total nutrient concentration of the system. An analysis of the steady state equations showed that the effect of temperature on zooplankton and POM biomass was levelled when primary production is nutrient limited. Temperature increase had a generally negative effect on all biomasses at high nutrient levels due to increased maintenance costs. Nutrient limitation of net primary production is the main factor governing the effect of stocks and flows as well as the stability of the system. All components of the system, except for phytoplankton biomass, are proportional to net production and thus to the net effect of light on photosynthesis. However, temperature determines the slope of that relationship. The resilience of the system was measured by calculating the eigenvalues of the steady state. Under oligotrophic conditions, the system can be stable, but an increase in temperature can cause instability or a decrease in resilience. This conclusion is discussed in the face of recent models that take spatial heterogeneity into account and display far more stable behavior, in better agreement to empirical data. Using simulations, we found that the amplitude of fluctuations of the herbivore stock increases with temperature while the mean biomass and minimum values decrease in comparison with steady state predictions

The Impact of Alternative Trait-Scaling Hypotheses for the Maximum Photosynthetic Carboxylation Rate (V (sub cmax)) on Global Gross Primary Production

NASA Technical Reports Server (NTRS)

Walker, Anthony P.; Quaife, Tristan; Van Bodegom, Peter M.; De Kauwe, Martin G.; Keenan, Trevor F.; Joiner, Joanna; Lomas, Mark R.; MacBean, Natasha; Xu, Chongang; Yang, Xiaojuan;

Widespread methanotrophic primary production in lowland chalk rivers.

PubMed

Shelley, Felicity; Grey, Jonathan; Trimmer, Mark

2014-05-22

Methane is oversaturated relative to the atmosphere in many rivers, yet its cycling and fate is poorly understood. While photosynthesis is the dominant source of autotrophic carbon to rivers, chemosynthesis and particularly methane oxidation could provide alternative sources of primary production where the riverbed is heavily shaded or at depth beneath the sediment surface. Here, we highlight geographically widespread methanotrophic carbon fixation within the gravel riverbeds of over 30 chalk rivers. In 15 of these, the potential for methane oxidation (methanotrophy) was also compared with photosynthesis. In addition, we performed detailed concurrent measurements of photosynthesis and methanotrophy in one large chalk river over a complete annual cycle, where we found methanotrophy to be active to at least 15 cm into the riverbed and to be strongly substrate limited. The seasonal trend in methanotrophic activity reflected that of the riverine methane concentrations, and thus the highest rates were measured in mid-summer. At the sediment surface, photosynthesis was limited by light for most of the year with heavy shading induced by dense beds of aquatic macrophytes. Across 15 rivers, in late summer, we conservatively calculated that net methanotrophy was equivalent to between 1% and 46% of benthic net photosynthetic production within the gravel riverbed, with a median value of 4%. Hence, riverbed chemosynthesis, coupled to the oxidation of methane, is widespread and significant in English chalk rivers.

Widespread methanotrophic primary production in lowland chalk rivers

PubMed Central

Shelley, Felicity; Grey, Jonathan; Trimmer, Mark

2014-01-01

Methane is oversaturated relative to the atmosphere in many rivers, yet its cycling and fate is poorly understood. While photosynthesis is the dominant source of autotrophic carbon to rivers, chemosynthesis and particularly methane oxidation could provide alternative sources of primary production where the riverbed is heavily shaded or at depth beneath the sediment surface. Here, we highlight geographically widespread methanotrophic carbon fixation within the gravel riverbeds of over 30 chalk rivers. In 15 of these, the potential for methane oxidation (methanotrophy) was also compared with photosynthesis. In addition, we performed detailed concurrent measurements of photosynthesis and methanotrophy in one large chalk river over a complete annual cycle, where we found methanotrophy to be active to at least 15 cm into the riverbed and to be strongly substrate limited. The seasonal trend in methanotrophic activity reflected that of the riverine methane concentrations, and thus the highest rates were measured in mid-summer. At the sediment surface, photosynthesis was limited by light for most of the year with heavy shading induced by dense beds of aquatic macrophytes. Across 15 rivers, in late summer, we conservatively calculated that net methanotrophy was equivalent to between 1% and 46% of benthic net photosynthetic production within the gravel riverbed, with a median value of 4%. Hence, riverbed chemosynthesis, coupled to the oxidation of methane, is widespread and significant in English chalk rivers. PMID:24695425

Iron Resources and Oceanic Nutrients - Advancement of Global Environment Simulations (ironages)

NASA Astrophysics Data System (ADS)

de Baar, H. J. W.; Ironages Team

Iron limits productivity in 40 percent of the oceans, and is a co-limitation in the re- maining 60 percent of surface waters. Moreover the paradigm of a single factor limit- ing plankton blooms, is presently giving way to co-limitation by light, and the nutri- ents N, P, Si, and Fe. Primary production, export into the deep sea, and CO2 uptake from the atmosphere together form the 'biological pump' in Ocean Biogeochemi- cal Climate Models (OBCM's). Thus far OBCM's assume just one limiting nutrient (P) and one universal phytoplankton species, for deriving C budgets and CO2 ex- change with the atmosphere. New realistic OBCM's are being developed in IRON- AGES for budgeting and air/sea exchanges of both CO2 and DMS, implementing (1) co-limitation by 4 nutrients of 5 major taxonomic classes of phytoplankton in a nested plankton ecosystem model, (ii) DMS(P) pathways, (iii) global iron cycling, (iv) chem- ical forms of iron and (v) iron supply in surface waters from above by aerosols and from below out of reducing margin sediments. IRONAGES is a consortium of 12 Eu- ropean institutes coordinated by the Royal NIOZ.

Precipitation-productivity Relation in Grassland in Northern China: Investigations at Multiple Spatiotemporal Scales

NASA Astrophysics Data System (ADS)

Hu, Z.

2017-12-01

Climate change is predicted to cause dramatic variability in precipitation regime, not only in terms of change in annual precipitation amount, but also in precipitation seasonal distribution and precipitation event characteristics (high frenquency extrem precipitation, larger but fewer precipitation events), which combined to influence productivity of grassland in arid and semiarid regions. In this study, combining remote sensing products with in-situ measurements of aboveground net primary productivity (ANPP) and gross primary productivity (GPP) data from eddy covariance system in grassland of northern China, we quantified the effects of spatio-temporal vairation in precipitation on productivity from local sites to region scale. We found that, for an individual precipitation event, the duration of GPP-response to the individual precipitation event and the maximum absolute GPP response induced by the individual precipitation event increased linearly with the size of precipitation events. Comparison of the productivity-precipitation relationships between multi-sites determined that the predominant characteristics of precipitation events (PEC) that affected GPP differed remarkably between the water-limited temperate steppe and the temperature-limited alpine meadow. The number of heavy precipitation events (>10 mm d-1) was the most important PEC to impact GPP in the temperate steppe through affecting soil moisture at different soil profiles, while precipitation interval was the factor that affected GPP most in the alpine meadow via its effects on temperature. At the region scale, shape of ANPP-precipitation relationship varies with distinct spatial scales, and besides annual precipitation, precipitation seasonal distribution also has comparable impacts on spatial variation in ANPP. Temporal variability in ANPP was lower at both the dry and wet end, and peaked at a precipitation of 243.1±3.5mm, which is the transition region between typical steppe and desert steppe. Our work has important implications to obtain an advanced understanding of productivity-response of grassland ecosystems to altered precipitation regimes.

Reuse and recycle--considering the soil below constructions.

PubMed

Suer, Pascal; Wik, Ola; Erlandsson, Martin

2014-07-01

The European Construction Products Regulation provides a life cycle based framework for the environmental assessment of construction products. Harmonised European standards for the assessment of the release of dangerous substances and for declaration of environmental performance are in progress. Risk based limit values for the protection of soil and groundwater below construction works will still bet set nationally. In this paper we review the possibilities to expand the ongoing harmonisation to include risk assessment and life cycle assessment (LCA). Based on reviews of national European limit value models (LMVs) for assessment of release to soil and groundwater, two areas for harmonisation emerge: 1- The toxicological criteria. Toxicological endpoints to protect human health and environment are similar, and data from the same toxicological data sets are used to establish acceptance criteria. 2- The emission part of LMVs. We extracted six generic construction works for granular materials. These encompass the most common choices and span the different release scenarios applied. Harmonised emission models would also facilitate LCA and environmental product declaration (EPD). The immission or transport part of the LVMs is less promising for harmonisation. Locating the acceptance criteria point of compliance close to the construction works is advantageous from many aspects and would facilitate harmonisation of assessments. We have identified two different strategies to include recycling in the assessments: 1- Tiered procedure where assessment and declaration of performance are made for the intended primary use of the product only and renewed assessments are made whenever the construction works are demolished and the product is recovered. 2- Scenario based procedure where future recycling scenarios, into new products and construction works, are forecasted. In this case the initial assessment and declaration of environmental performance of a construction product is performed both for the intended primary use of the product and for the recycling scenarios. Copyright © 2014 Elsevier B.V. All rights reserved.

Beet curly top virus strains associated with sugar beet in Idaho, Oregon, and a Western U.S. collection

USDA-ARS?s Scientific Manuscript database

Curly top of sugar beet is a serious, yield limiting disease in semi-arid production areas caused by Beet curly top virus (BCTV) and transmitted by the beet leafhopper. One of the primary means of control for BCTV in sugar beet is host resistance but effectiveness of resistance can vary among BCTV ...

Plankton Dynamics and Mesoscale Turbulence

DTIC Science & Technology

2010-06-29

transformation of inorganic materials and light into living matter by photosynthesis ) is operated mainly by small, unicellular algae that float freely in the...ecosystems, primary production (the transformation of inorganic materials and light into living matter by photosynthesis ) is operated mainly by small...them into biomass via photosynthesis . The main limiting factors for phytoplankton growth are light and nutrient availability; for this reason

Contribution of dinitrogen fixation to bacterial and primary productivity in the Gulf of Aqaba (Red Sea)

NASA Astrophysics Data System (ADS)

Rahav, E.; Herut, B.; Mulholland, M. R.; Voß, B.; Stazic, D.; Steglich, C.; Hess, W. R.; Berman-Frank, I.

2013-06-01

We evaluated the seasonal contribution of heterotrophic and autotrophic diazotrophy to the total dinitrogen (N2) fixation in a representative pelagic station in the northern Gulf of Aqaba in early spring when the water column was mixed and during summer under full thermal stratification. N2 fixation rates were low during the mixed period (˜ 0.1 nmol N L-1 d-1) and were significantly coupled with both primary and bacterial productivity. During the stratified period N2 fixation rates were four-fold higher (˜ 0.4 nmol N L-1 d-1) and were significantly correlated solely with bacterial productivity. Furthermore, while experimental enrichment of seawater by phosphorus (P) enhanced bacterial productivity and N2 fixation rates during both seasons primary productivity was stimulated by P only in the early spring. Metatranscriptomic analyses from the stratified period identified the major diazotrophic contributors as related to heterotrophic prokaryotes from the Euryarchaeota and Desulfobacterales (Deltaproteobacteria) or Chlorobiales (Chlorobia). Moreover, during this season, experimental amendments to seawater applying a combination of the photosynthetic inhibitor 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU) and a mixture of amino acids increased both bacterial productivity and N2 fixation rates. Our findings from the northern Gulf of Aqaba indicate a~shift in the diazotrophic community from phototrophic and heterotrophic populations, including small blooms of the cyanobacterium Trichodesmium, in winter/early spring, to predominantly heterotrophic diazotrophs in summer that may be both P and carbon limited as the additions of P and amino acids illustrated.

Preferential depletion of zinc within Costa Rica upwelling dome creates conditions for zinc co-limitation of primary production

PubMed Central

Dreux Chappell, P.; Vedmati, Jagruti; Selph, Karen E.; Cyr, Heather A.; Jenkins, Bethany D.; Landry, Michael R.; Moffett, James W.

2016-01-01

The Costa Rica Dome (CRD) is a wind-driven feature characterized by high primary production and an unusual cyanobacterial bloom in surface waters. It is not clear whether this bloom arises from top-down or bottom-up processes. Several studies have argued that trace metal geochemistry within the CRD contributes to the composition of the phytoplankton assemblages, since cyanobacteria and eukaryotic phytoplankton have different transition metal requirements. Here, we report that total dissolved zinc (Zn) is significantly depleted relative to phosphate (P) and silicate (Si) within the upper water column of the CRD compared with other oceanic systems, and this may create conditions favorable for cyanobacteria, which have lower Zn requirements than their eukaryotic competitors. Shipboard grow-out experiments revealed that while Si was a limiting factor under our experimental conditions, additions of Si and either iron (Fe) or Zn led to higher biomass than Si additions alone. The addition of Fe and Zn alone did not lead to significant enhancements. Our results suggest that the depletion of Zn relative to P in upwelled waters may create conditions in the near-surface waters that favor phytoplankton with low Zn requirements, including cyanobacteria. PMID:27275028

Setting nutrient thresholds to support an ecological assessment based on nutrient enrichment, potential primary production and undesirable disturbance.

PubMed

Devlin, Michelle; Painting, Suzanne; Best, Mike

2007-01-01

The EU Water Framework Directive recognises that ecological status is supported by the prevailing physico-chemical conditions in each water body. This paper describes an approach to providing guidance on setting thresholds for nutrients taking account of the biological response to nutrient enrichment evident in different types of water. Indices of pressure, state and impact are used to achieve a robust nutrient (nitrogen) threshold by considering each individual index relative to a defined standard, scale or threshold. These indices include winter nitrogen concentrations relative to a predetermined reference value; the potential of the waterbody to support phytoplankton growth (estimated as primary production); and detection of an undesirable disturbance (measured as dissolved oxygen). Proposed reference values are based on a combination of historical records, offshore (limited human influence) nutrient concentrations, literature values and modelled data. Statistical confidence is based on a number of attributes, including distance of confidence limits away from a reference threshold and how well the model is populated with real data. This evidence based approach ensures that nutrient thresholds are based on knowledge of real and measurable biological responses in transitional and coastal waters.

Prey Vulnerability Limits Top-Down Control and Alters Reciprocal Feedbacks in a Subsidized Model Food Web

PubMed Central

Atlas, William I.; Palen, Wendy J.

2014-01-01

Resource subsidies increase the productivity of recipient food webs and can affect ecosystem dynamics. Subsidies of prey often support elevated predator biomass which may intensify top-down control and reduce the flow of reciprocal subsidies into adjacent ecosystems. However, top-down control in subsidized food webs may be limited if primary consumers posses morphological or behavioral traits that limit vulnerability to predation. In forested streams, terrestrial prey support high predator biomass creating the potential for strong top-down control, however armored primary consumers often dominate the invertebrate assemblage. Using empirically based simulation models, we tested the response of stream food webs to variations in subsidy magnitude, prey vulnerability, and the presence of two top predators. While terrestrial prey inputs increased predator biomass (+12%), the presence of armored primary consumers inhibited top-down control, and diverted most aquatic energy (∼75%) into the riparian forest through aquatic insect emergence. Food webs without armored invertebrates experienced strong trophic cascades, resulting in higher algal (∼50%) and detrital (∼1600%) biomass, and reduced insect emergence (−90%). These results suggest prey vulnerability can mediate food web responses to subsidies, and that top-down control can be arrested even when predator-invulnerable consumers are uncommon (20%) regardless of the level of subsidy. PMID:24465732

Physical and biological controls over patterns of methane flux from wetland soils

NASA Astrophysics Data System (ADS)

Owens, S. M.; von Fischer, J. C.

2006-12-01

While methane (CH4) production and plant-facilitated gas transport both contribute to patterns of CH4 emissions from wetlands, the relative importance of each mechanism is uncertain. In flooded wetland soils, CH4 is produced by anaerobic methanogenic bacteria. In the absence of competing oxidizers (i.e. SO42-, NO3-, O2), CH4 production is limited by the availability of labile carbon, which is supplied from recent plant primary production (e.g. as root exudates) and converted by anaerobic fermenting bacteria into methanogenic substrate (e.g. acetate). Because diffusion of gases through saturated soils is extremely slow, the aerenchymous tissues of wetland plants provide the primary pathway for CH4 emissions in systems dominated by emergent vascular vegetation. Aerenchyma also function to shuttle atmospheric oxygen to belowground plant tissues for respiration. Consequentially, root radial oxygen loss results in an oxidized rhizosphere, which limits CH4 production and provides habitat for aerobic methanotrophic bacteria, potentially reducing CH4 emissions. To test the contribution of recent photosynthates on CH4 emissions, a shading experiment was conducted in a Juncus-dominated wetland in the Colorado Front Range. Shade treatments significantly reduced net ecosystem production (NEE) and gross primary production (GPP) compared to control plots (p=0.0194 and p=0.0551, respectively). While CH4 emissions did not significantly differ between treatments, CH4 flux rates were strongly correlated with NEE (p=0.0063) and GPP (p=0.0020), in support of the hypothesis that labile carbon from recent photosynthesis controls patterns of CH4 emissions. The relative importance of plant gas transport and methane consumption rates on CH4 emissions is not known. Methane flux is more tightly correlated with NEE than GPP, which may be explained by increased CH4 consumption or decreased CH4 production as a result of rhizospheric oxidation. The ability to predict future emissions of this important greenhouse gas will be improved by increased understanding of the controls regulating its emission. Future work will focus on developing a tracer technique using SF6 and 13C-labeled CH4 to determine how plant gas transport properties and CH4 consumption contribute to patterns of methane emissions from wetlands.

Open-source point-of-care electronic medical records for use in resource-limited settings: systematic review and questionnaire surveys

PubMed Central

Bru, Juan; Berger, Christopher A

2012-01-01

Background Point-of-care electronic medical records (EMRs) are a key tool to manage chronic illness. Several EMRs have been developed for use in treating HIV and tuberculosis, but their applicability to primary care, technical requirements and clinical functionalities are largely unknown. Objectives This study aimed to address the needs of clinicians from resource-limited settings without reliable internet access who are considering adopting an open-source EMR. Study eligibility criteria Open-source point-of-care EMRs suitable for use in areas without reliable internet access. Study appraisal and synthesis methods The authors conducted a comprehensive search of all open-source EMRs suitable for sites without reliable internet access. The authors surveyed clinician users and technical implementers from a single site and technical developers of each software product. The authors evaluated availability, cost and technical requirements. Results The hardware and software for all six systems is easily available, but they vary considerably in proprietary components, installation requirements and customisability. Limitations This study relied solely on self-report from informants who developed and who actively use the included products. Conclusions and implications of key findings Clinical functionalities vary greatly among the systems, and none of the systems yet meet minimum requirements for effective implementation in a primary care resource-limited setting. The safe prescribing of medications is a particular concern with current tools. The dearth of fully functional EMR systems indicates a need for a greater emphasis by global funding agencies to move beyond disease-specific EMR systems and develop a universal open-source health informatics platform. PMID:22763661

A winter dinoflagellate bloom drives high rates of primary production in a Patagonian fjord ecosystem

NASA Astrophysics Data System (ADS)

Montero, P.; Pérez-Santos, I.; Daneri, G.; Gutiérrez, M. H.; Igor, G.; Seguel, R.; Purdie, D.; Crawford, D. W.

2017-12-01

A dense winter bloom of the dinoflagellate Heterocapsa triquetra was observed at a fixed station (44°35.3‧S; 72°43.6‧W) in the Puyuhuapi Fjord in Chilean Patagonia during July 2015. H. triquetra dominated the phytoplankton community in the surface waters between 2 and 15 m (13-58 × 109 cell m-2), with abundances some 3 to 15 times higher than the total abundance of the diatom assemblage, which was dominated by Skeletonema spp. The high abundance of dinoflagellates was reflected in high rates of gross primary production (GPP; 0.6-1.6 g C m-2 d-1) and chlorophyll-a concentration (Chl-a; 70-199.2 mg m-2) that are comparable to levels reported in spring diatom blooms in similar Patagonian fjords. We identify the main forcing factors behind a pulse of organic matter production during the non-productive winter season, and test the hypothesis that low irradiance levels are a key factor limiting phytoplankton blooms and subsequent productivity during winter. Principal Component Analysis (PCA) indicated that GPP rates were significantly correlated (r = -0.8, p < 0.05) with a decrease in salinity/temperature and the presence of the Heterocapsa bloom. The bloom occurred under low surface irradiance levels characteristic of austral winter and was accompanied by strong northern winds, associated with the passage of a low-pressure system, and a water column dominated by double diffusive layering. To our knowledge, this is the first report of a dense dinoflagellate bloom during deep austral winter in a Patagonian fjord, and our data challenge the paradigm of light limitation as a factor controlling phytoplankton blooms in this region in winter.

Global Patterns in Human Consumption of Net Primary Production

NASA Technical Reports Server (NTRS)

Imhoff, Marc L.; Bounoua, Lahouari; Ricketts, Taylor; Loucks, Colby; Harriss, Robert; Lawrence William T.

2004-01-01

The human population and its consumption profoundly affect the Earth's ecosystems. A particularly compelling measure of humanity's cumulative impact is the fraction of the planet's net primary production that we appropriate for our Net primary production-the net amount of solar energy converted to plant organic matter through photosynthesis-can be measured in units of elemental carbon and represents the primary food energy source for the world's ecosystems. Human appropriation of net primary production, apart from leaving less for other species to use, alters the composition of the atmosphere, levels of biodiversity, flows within food webs and the provision of important primary production required by humans and compare it to the total amount generated on the landscape. We then derive a spatial ba!mce sheet of net primary production supply and demand for the world. We show that human appropriation of net primary production varies spatially from almost zero to many times the local primary production. These analyses reveal the uneven footprint of human consumption and related environmental impacts, indicate the degree to which human populations depend on net primary production "imports" and suggest policy options for slowing future growth of human appropriation of net primary production.

TRUMP. Transient & S-State Temperature Distribution

DOE Office of Scientific and Technical Information (OSTI.GOV)

Elrod, D.C.; Turner, W.D.

1992-03-03

TRUMP solves a general nonlinear parabolic partial differential equation describing flow in various kinds of potential fields, such as fields of temperature, pressure, or electricity and magnetism; simultaneously, it will solve two additional equations representing, in thermal problems, heat production by decomposition of two reactants having rate constants with a general Arrhenius temperature dependence. Steady-state and transient flow in one, two, or three dimensions are considered in geometrical configurations having simple or complex shapes and structures. Problem parameters may vary with spatial position, time, or primary dependent variables, temperature, pressure, or field strength. Initial conditions may vary with spatial position,more » and among the criteria that may be specified for ending a problem are upper and lower limits on the size of the primary dependent variable, upper limits on the problem time or on the number of time-steps or on the computer time, and attainment of steady state.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Elrod, D.C.; Turner, W.D.

TRUMP solves a general nonlinear parabolic partial differential equation describing flow in various kinds of potential fields, such as fields of temperature, pressure, or electricity and magnetism; simultaneously, it will solve two additional equations representing, in thermal problems, heat production by decomposition of two reactants having rate constants with a general Arrhenius temperature dependence. Steady-state and transient flow in one, two, or three dimensions are considered in geometrical configurations having simple or complex shapes and structures. Problem parameters may vary with spatial position, time, or primary dependent variables, temperature, pressure, or field strength. Initial conditions may vary with spatial position,more » and among the criteria that may be specified for ending a problem are upper and lower limits on the size of the primary dependent variable, upper limits on the problem time or on the number of time-steps or on the computer time, and attainment of steady state.« less

Iron Fertilization and Productivity in the Panama Basin

NASA Astrophysics Data System (ADS)

Loveley, M. R.; Marcantonio, F.; Lyle, M. W.; Hertzberg, J. E.

2016-12-01

The Panama Basin, located in the Eastern Equatorial Pacific, is a high-nutrient low-chlorophyll zone (HNLC). HNLC zones are thought to be iron limited, and thus have low rates of primary productivity. Iron can be delivered to the ocean by continental dust, and times of increased dust flux are thought to be correlated with increased productivity. However, few studies have addressed the relationship between dust flux and primary productivity in the Panama Basin. We use xs230Th-derived 232Th accumulation rates as a dust flux proxy, and excess Ba, and authigenic U to reconstruct primary productivity in the basin. We focus on these proxies' differences between glacial and interglacial times for the last five marine isotope stages, during which glacial times are dustier. Our study involves two marine sediment cores, one retrieved from the northern part of the Panama Basin at the Cocos Ridge, (MV1014-01-"8JC", 6° 14.0'N 86° 2.6' W, 1993 m depth), and one from the southern part of the basin at the Carnegie Ridge, (MV1014-02-"17JC" 0° 10.8'S 85° 52.0' W, 2846 m depth). Both cores record high sedimentation rates (between 4 and 20 cm kyr-1) which allow us to present a high-resolution study of the basin. However, sediment focusing and the preferential transport of fine grained material have been identified in these cores. In the Panama Basin, the lithogenic dust fraction is part of the fine fraction (<4 µm) influenced by sediment focusing. Our recent research has shown that 230Th-normalized MARs of the fine-grained fraction remain relatively unaffected by the redistribution process. Our preliminary findings show that dust flux may not have played a major role in influencing primary productivity during glacial periods in the Panama Basin. Other factors, such as nutrient consumption or nutrient supply from upwelled deep water, may have had a more dominant role during these times.

Atmospheric chemistry of n-butanol: kinetics, mechanisms, and products of Cl atom and OH radical initiated oxidation in the presence and absence of NO(x).

PubMed

Hurley, M D; Wallington, T J; Laursen, L; Javadi, M S; Nielsen, O J; Yamanaka, T; Kawasaki, M

2009-06-25

Smog chamber/FTIR techniques were used to determine rate constants of k(Cl+n-butanol) = (2.21 +/- 0.38) x 10(-10) and k(OH+n-butanol) = (8.86 +/- 0.85) x 10(-12) cm(3) molecule(-1) s(-1) in 700 Torr of N(2)/O(2) diluent at 296 +/- 2K. The sole primary product identified from the Cl atom initiated oxidation of n-butanol in the absence of NO was butyraldehyde (38 +/- 2%, molar yield). The primary products of the Cl atom initiated oxidation of n-butanol in the presence of NO were (molar yield) butyraldehyde (38 +/- 2%), propionaldehyde (23 +/- 3%), acetaldehyde (12 +/- 4%), and formaldehyde (33 +/- 3%). The substantially lower yields of propionaldehyde, acetaldehyde, and formaldehyde as primary products in experiments conducted in the absence of NO suggests that chemical activation is important in the atmospheric chemistry of CH(3)CH(2)CH(O)CH(2)OH and CH(3)CH(O)CH(2)CH(2)OH alkoxy radicals. The primary products of the OH radical initiated oxidation of n-butanol in the presence of NO were (molar yields) butyraldehyde (44 +/- 4%), propionaldehyde (19 +/- 2%), and acetaldehyde (12 +/- 3%). In all cases, the product yields were independent of oxygen concentration over the partial pressure range of 10-600 Torr. The yields of propionaldehyde, acetaldehyde, and formaldehyde quoted above were not corrected for secondary formation via oxidation of higher aldehydes and should be treated as upper limits. The reactions of Cl atoms and OH radicals with n-butanol proceed 38 +/- 2 and 44 +/- 4%, respectively, via attack on the alpha-position to give an alpha-hydroxy alkyl radical which reacts with O(2) to give butyraldehyde. The results are discussed with respect to the atmospheric chemistry of n-butanol.

Diurnal variation in the coupling of photosynthetic electron transport and carbon fixation in iron-limited phytoplankton in the NE subarctic Pacific

NASA Astrophysics Data System (ADS)

Schuback, N.; Flecken, M.; Maldonado, M. T.; Tortell, P. D.

2015-10-01

Active chlorophyll a fluorescence approaches, including fast repetition rate fluorometry (FRRF), have the potential to provide estimates of phytoplankton primary productivity at unprecedented spatial and temporal resolution. FRRF-derived productivity rates are based on estimates of charge separation at PSII (ETRRCII), which must be converted into ecologically relevant units of carbon fixation. Understanding sources of variability in the coupling of ETRRCII and carbon fixation provides physiological insight into phytoplankton photosynthesis, and is critical for the application of FRRF as a primary productivity measurement tool. In the present study, we simultaneously measured phytoplankton carbon fixation and ETRRCII in the iron-limited NE subarctic Pacific, over the course of a diurnal cycle. We show that rates of ETRRCII are closely tied to the diurnal cycle in light availability, whereas rates of carbon fixation appear to be influenced by endogenous changes in metabolic energy allocation under iron-limited conditions. Unsynchronized diurnal oscillations of the two rates led to 3.5 fold changes in the conversion factor coupling ETRRCII and carbon fixation (Φe:C / nPSII). Consequently, diurnal variability in phytoplankton carbon fixation cannot be adequately captured with FRRF approaches if a constant conversion factor is applied. Utilizing several auxiliary photophysiological measurements, we observed that a high conversion factor is associated with conditions of excess light, and correlates with the expression of non-photochemical quenching (NPQ) in the pigment antenna, as derived from FRRF measurements. The observed correlation between NPQ and the conversion factor Φe:C / nPSII has the potential to improve estimates of phytoplankton carbon fixation rates from FRRF measurements alone.

Diurnal variation in the coupling of photosynthetic electron transport and carbon fixation in iron-limited phytoplankton in the NE subarctic Pacific

NASA Astrophysics Data System (ADS)

Schuback, Nina; Flecken, Mirkko; Maldonado, Maria T.; Tortell, Philippe D.

2016-02-01

Active chlorophyll a fluorescence approaches, including fast repetition rate fluorometry (FRRF), have the potential to provide estimates of phytoplankton primary productivity at an unprecedented spatial and temporal resolution. FRRF-derived productivity rates are based on estimates of charge separation in reaction center II (ETRRCII), which must be converted into ecologically relevant units of carbon fixation. Understanding sources of variability in the coupling of ETRRCII and carbon fixation provides physiological insight into phytoplankton photosynthesis and is critical for the application of FRRF as a primary productivity measurement tool. In the present study, we simultaneously measured phytoplankton carbon fixation and ETRRCII in the iron-limited NE subarctic Pacific over the course of a diurnal cycle. We show that rates of ETRRCII are closely tied to the diurnal cycle in light availability, whereas rates of carbon fixation appear to be influenced by endogenous changes in metabolic energy allocation under iron-limited conditions. Unsynchronized diurnal oscillations of the two rates led to 3.5-fold changes in the conversion factor between ETRRCII and carbon fixation (Kc / nPSII). Consequently, diurnal variability in phytoplankton carbon fixation cannot be adequately captured with FRRF approaches if a constant conversion factor is applied. Utilizing several auxiliary photophysiological measurements, we observed that a high conversion factor is associated with conditions of excess light and correlates with the increased expression of non-photochemical quenching (NPQ) in the pigment antenna, as derived from FRRF measurements. The observed correlation between NPQ and Kc / nPSII requires further validation but has the potential to improve estimates of phytoplankton carbon fixation rates from FRRF measurements alone.

Vpr overcomes macrophage-specific restriction of HIV-1 Env expression and virion production

PubMed Central

Mashiba, Michael; Collins, David R.; Terry, Valeri H.; Collins, Kathleen L.

2014-01-01

Summary The HIV-1 accessory protein Vpr enhances infection of primary macrophages through unknown mechanisms. Recent studies demonstrated that Vpr interactions with the cellular DCAF1-DDB1-CUL4 E3 ubiquitin ligase complex limit activation of innate immunity and interferon (IFN) induction. We describe a restriction mechanism that targets the HIV-1 envelope protein Env but is overcome by Vpr and its interaction with DCAF1. This restriction is active in the absence of Vpr in HIV-1-infected primary macrophages and macrophage-epithelial cell heterokaryons, but not epithelial cell lines. HIV-1-infected macrophages lacking Vpr express more IFN following infection, target Env for lysosomal degradation and produce fewer Env-containing virions. Conversely, Vpr expression reduces IFN induction, rescues Env expression and enhances virion release. Addition of IFN or silencing DCAF1 reduces the amount of cell-associated Env and virion production in wild-type HIV-1-infected primary macrophages. These findings provide insight into an IFN-stimulated macrophage-specific restriction pathway targeting HIV-1 Env that is counteracted by Vpr. PMID:25464830

Predator-induced reduction of freshwater carbon dioxide emissions

NASA Astrophysics Data System (ADS)

Atwood, Trisha B.; Hammill, Edd; Greig, Hamish S.; Kratina, Pavel; Shurin, Jonathan B.; Srivastava, Diane S.; Richardson, John S.

2013-03-01

Predators can influence the exchange of carbon dioxide between ecosystems and the atmosphere by altering ecosystem processes such as decomposition and primary production, according to food web theory. Empirical knowledge of such an effect in freshwater systems is limited, but it has been suggested that predators in odd-numbered food chains suppress freshwater carbon dioxide emissions, and predators in even-numbered food chains enhance emissions. Here, we report experiments in three-tier food chains in experimental ponds, streams and bromeliads in Canada and Costa Rica in the presence or absence of fish (Gasterosteus aculeatus) and invertebrate (Hesperoperla pacifica and Mecistogaster modesta) predators. We monitored carbon dioxide fluxes along with prey and primary producer biomass. We found substantially reduced carbon dioxide emissions in the presence of predators in all systems, despite differences in predator type, hydrology, climatic region, ecological zone and level of in situ primary production. We also observed lower amounts of prey biomass and higher amounts of algal and detrital biomass in the presence of predators. We conclude that predators have the potential to markedly influence carbon dioxide dynamics in freshwater systems.

Relationships between ecosystem metabolism, benthic macroinvertebrate densities, and environmental variables in a sub-arctic Alaskan river

USGS Publications Warehouse

Benson, Emily R.; Wipfli, Mark S.; Clapcott, Joanne E.; Hughes, Nicholas F.

2013-01-01

Relationships between environmental variables, ecosystem metabolism, and benthos are not well understood in sub-arctic ecosystems. The goal of this study was to investigate environmental drivers of river ecosystem metabolism and macroinvertebrate density in a sub-arctic river. We estimated primary production and respiration rates, sampled benthic macroinvertebrates, and monitored light intensity, discharge rate, and nutrient concentrations in the Chena River, interior Alaska, over two summers. We employed Random Forests models to identify predictor variables for metabolism rates and benthic macroinvertebrate density and biomass, and calculated Spearman correlations between in-stream nutrient levels and metabolism rates. Models indicated that discharge and length of time between high water events were the most important factors measured for predicting metabolism rates. Discharge was the most important variable for predicting benthic macroinvertebrate density and biomass. Primary production rate peaked at intermediate discharge, respiration rate was lowest at the greatest time since last high water event, and benthic macroinvertebrate density was lowest at high discharge rates. The ratio of dissolved inorganic nitrogen to soluble reactive phosphorus ranged from 27:1 to 172:1. We found that discharge plays a key role in regulating stream ecosystem metabolism, but that low phosphorous levels also likely limit primary production in this sub-arctic stream.

Intramolecular Hydroamination of Unbiased and Functionalized Primary Aminoalkenes Catalyzed by a Rhodium Aminophosphine Complex

PubMed Central

Julian, Lisa D.; Hartwig, John F.

2010-01-01

We report a rhodium catalyst that exhibits high reactivity for the hydroamination of primary aminoalkenes that are unbiased toward cyclization and that possess functional groups that would not be tolerated in hydroaminations catalyzed by more electrophilic systems. This catalyst contains an unusual diaminophosphine ligand that binds to rhodium in a κ3-P,O,P mode. The reactions catalyzed by this complex typically proceed at mild temperatures (room temperature to 70 °C), occur with primary aminoalkenes lacking substituents on the alkyl chain that bias the system toward cyclization, occur with primary aminoalkenes containing chloride, ester, ether, enolizable ketone, nitrile, and unprotected alcohol functionality, and occur with primary aminoalkenes containing internal olefins. Mechanistic data imply that these reactions occur with a turnover-limiting step that is different from that of reactions catalyzed by late transition metal complexes of Pd, Pt, and Ir. This change in the turnover-limiting step and resulting high activity of the catalyst stem from favorable relative rates for protonolysis of the M-C bond to release the hydroamination product vs reversion of the aminoalkyl intermediate to regenerate the acyclic precursor. Probes for the origin of the reactivity of the rhodium complex of L1 imply that the aminophosphine groups lead to these favorable rates by effects beyond steric demands and simple electron donation to the metal center. PMID:20839807

Dredged sediments as a resource for brick production: Possibilities and barriers from a consumers’ perspective

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cappuyns, Valérie, E-mail: valerie.cappuyns@kuleuven.be; Deweirt, Valentine; Rousseau, Sandra

Highlights: • Consumers are suspicious towards bricks produced from dredged sediments. • Technical quality, safety and environmental impacts are considered key characteristics. • Public has insufficient knowledge on bricks produced from dredged sediments. • Sensitization and provision of information to customers are of primary importance. - Abstract: A possible solution for the oversupply of dredged sediments is their use as a raw material in brick production. Despite the fact that several examples (e.g., Agostini et al., 2007; Hamer and Karius, 2002; Xu et al., 2014) show that this application is feasible, some economic, technical and social limitations interfere with themore » development of a market of dredged materials in brick production in Flanders. While we describe the main characteristics of the supply side, we focus on the limitations and barriers from the demand side in the present study. Based on a consumers survey we analyze consumers’ risk perceptions and attitudes towards bricks produced from dredged sediments. Consumers in Flanders are rather suspicious with respect to bricks produced from dredged sediments and their risk perception is mainly determined by the possibility of a bad bargain (brick of inferior quality) and the connotation with chemical contamination. The willingness to pay for bricks made from dredged sediments is mainly influenced by the age of the respondents, as well environmental awareness, and the respondents’ belief in their ability to influence environmental problems. Sensitization and information of customers seems to be of primary importance to make dredged-sediment-derived bricks a successful product.« less

Inhibitors of p38 suppress cytokine production in rheumatoid arthritis synovial membranes: does variable inhibition of interleukin-6 production limit effectiveness in vivo?

PubMed

Page, Theresa H; Brown, Anthony; Timms, Emma M; Foxwell, Brian M J; Ray, Keith P

2010-11-01

The activity of p38 MAPK regulates lipopolysaccharide (LPS)-stimulated production of key proinflammatory cytokines such as tumor necrosis factor α (TNFα). Consequently, p38 MAPK inhibitors have attracted considerable interest as potential treatments of rheumatoid arthritis (RA), and studies in murine models of arthritis have yielded promising results. However, the performance of several compounds in human clinical trials has been disappointing. At present, the reason for this poor performance is unclear. The aim of this study was to examine the effects of p38 inhibitors on both diseased and normal human tissue and cells, in order to test whether this kinase still plays a critical role in cytokine production under conditions of chronic inflammation. Proinflammatory and antiinflammatory cytokine production was monitored after treatment of primary human monocytes, macrophages, and RA synovial membrane cultures with p38 MAPK inhibitor compounds. The following 3 inhibitors were used in these studies: SB-203580 (inhibits the α and β isoforms), BIRB-796 (inhibits the α, β, γ, and δ isoforms), and a novel, structurally distinct p38 MAPK inhibitor, SB-731445 (inhibits the α and β isoforms). SB-731445 and SB-203580 produced profound inhibition of spontaneous production of proinflammatory cytokines (TNFα and interleukin-1 [IL-1]) in both RA membrane cultures and LPS-stimulated primary human monocytes. However, this and other p38 MAPK inhibitors produced a significant increase in IL-6 production by LPS-stimulated primary human macrophages and a decrease in IL-10 production by all cell types examined. The potentially proinflammatory consequences of these activities (decreased IL-10 production and increased IL-6 production) may offer some explanation for the inability of p38 MAPK inhibitors to provide the therapeutic benefit that had been hoped for in RA. Copyright © 2010 by the American College of Rheumatology.

Litter P content drives consumer production in detritus-based streams spanning an experimental N:P gradient.

PubMed

Demi, Lee M; Benstead, Jonathan P; Rosemond, Amy D; Maerz, John C

2018-02-01

Ecological stoichiometry theory (EST) is a key framework for predicting how variation in N:P supply ratios influences biological processes, at molecular to ecosystem scales, by altering the availability of C, N, and P relative to organismal requirements. We tested EST predictions by fertilizing five forest streams at different dissolved molar N:P ratios (2, 8, 16, 32, 128) for two years and tracking responses of macroinvertebrate consumers to the resulting steep experimental gradient in basal resource stoichiometry (leaf litter %N, %P, and N:P). Nitrogen and P content of leaf litter, the dominant basal resource, increased in all five streams following enrichment, with steepest responses in litter %P and N:P ratio. Additionally, increases in primary consumer biomass and production occurred in all five streams following N and P enrichment (averages across all streams: biomass by 1.2×, production by 1.6×). Patterns of both biomass and production were best predicted by leaf litter N:P and %P and were unrelated to leaf litter %N. Primary consumer production increased most in streams where decreases in leaf litter N:P were largest. Macroinvertebrate predator biomass and production were also strongly positively related to litter %P, providing robust experimental evidence for the primacy of P limitation at multiple trophic levels in these ecosystems. However, production of predatory macroinvertebrates was not related directly to primary consumer production, suggesting the importance of additional controls for macroinvertebrates at upper trophic positions. Our results reveal potential drivers of animal production in detritus-based ecosystems, including the relative importance of resource quality vs. quantity. Our study also sheds light on the more general impacts of variation in N:P supply ratio on nutrient-poor ecosystems, providing strong empirical support for predictions that nutrient enrichment increases food web productivity whenever large elemental imbalances between basal resources and consumer demand are reduced. © 2017 by the Ecological Society of America.

How phosphorus limitation can control climate-active gas sources and sinks

NASA Astrophysics Data System (ADS)

Gypens, Nathalie; Borges, Alberto V.; Ghyoot, Caroline

2017-06-01

Since the 1950's, anthropogenic activities have increased nutrient river loads to European coastal areas. Subsequent implementation of nutrient reduction policies have led to considerably reduction of phosphorus (P) loads from the mid-1980's, while nitrogen (N) loads were maintained, inducing a P limitation of phytoplankton growth in many eutrophied coastal areas such as the Southern Bight of the North Sea (SBNS). When dissolved inorganic phosphorus (DIP) is limiting, most phytoplankton organisms are able to indirectly acquire P from dissolved organic P (DOP). We investigate the impact of DOP use on phytoplankton production and atmospheric fluxes of CO2 and dimethylsulfide (DMS) in the SBNS from 1951 to 2007 using an extended version of the R-MIRO-BIOGAS model. This model includes a description of the ability of phytoplankton organisms to use DOP as a source of P. Results show that primary production can increase up to 30% due to DOP uptake under limiting DIP conditions. Consequently, simulated DMS emissions also increase proportionally while CO2 emissions to the atmosphere decrease, relative to the reference simulation without DOP uptake.

Production of Primary Amines by Reductive Amination of Biomass-Derived Aldehydes/Ketones.

PubMed

Liang, Guanfeng; Wang, Aiqin; Li, Lin; Xu, Gang; Yan, Ning; Zhang, Tao

2017-03-06

Transformation of biomass into valuable nitrogen-containing compounds is highly desired, yet limited success has been achieved. Here we report an efficient catalyst system, partially reduced Ru/ZrO 2 , which could catalyze the reductive amination of a variety of biomass-derived aldehydes/ketones in aqueous ammonia. With this approach, a spectrum of renewable primary amines was produced in good to excellent yields. Moreover, we have demonstrated a two-step approach for production of ethanolamine, a large-market nitrogen-containing chemical, from lignocellulose in an overall yield of 10 %. Extensive characterizations showed that Ru/ZrO 2 -containing multivalence Ru association species worked as a bifunctional catalyst, with RuO 2 as acidic promoter to facilitate the activation of carbonyl groups and Ru as active sites for the subsequent imine hydrogenation. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Study on chemical hydrography, chlorophyll-a and primary productivity in Liaodong Bay, China

NASA Astrophysics Data System (ADS)

Pei, Shaofeng; Laws, Edward A.; Zhang, Haibo; Ye, Siyuan; Kemper, Marc T.; Yuan, Hongming; Xu, Gang; Yang, Shixiong; Liu, Haiyue; Zhu, Yaxuan

2018-03-01

A field study was carried out during the summer of 2013 in Liaodong Bay, China to determine the dynamics of the phytoplankton in the bay and the extent to which primary production in the bay was constrained by environmental factors. There was little or no evidence of limitation of phytoplankton production by nutrient concentrations at any of the sampling stations, with the possible exception of a few offshore stations where phosphate concentrations were less than 30 nM. This assessment was consistent with the results of nutrient enrichment experiments and the values of light-saturated photosynthetic rates and areal photosynthetic rates. To examine the effects of irradiance and temperature on light-saturated photosynthetic rates normalized to chlorophyll a concentrations (Poptb) at twelve stations where photosynthetic rates were measured by 14C method, light-conditioned values were modeled as a function of the temperature with a satisfactory fit to our field data (R2 = 0.60, p = 0.003). According to this model, the light-conditioned Poptb values increased with temperatures from 22 °C to roughly 25 °C but declined precipitously at higher temperatures, and Poptb values and corresponding areal photosynthetic rates at all 66 stations were estimated to be 7.6 ± 2.4 g C g-1 Chl a h-1 and 532 ± 429 gC m-2 d-1 in average, respectively. The quanta absorbed per carbon atom fixed averaged 14 ± 2 and 37 ± 10 at six coastal stations and six estuarine stations, respectively. The relatively high Poptb values and low quantum requirements at the coastal stations implied the highly efficient usage of absorbed light by phytoplankton under nutrient-replete conditions and favorable temperatures. Comparatively, the low Poptb values and high quantum requirements at the estuarine stations suggested rather extreme light limitation and lowly efficient usage of absorbed light in photosynthesis in the Liaohe River estuary. Areal production in Liaodong Bay appears to be controlled by a combination of temperature and light limitation.

Preparation of Simulated LBL Defects for Round Robin Experiment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gerczak, Tyler J.; Baldwin, Charles A.; Hunn, John D.

2016-01-01

A critical characteristic of the TRISO fuel design is its ability to retain fission products. During reactor operation, the TRISO layers act as barriers to release of fission products not stabilized in the kernel. Each component of the TRISO particle and compact construction plays a unique role in retaining select fission products, and layer performance is often interrelated. The IPyC, SiC, and OPyC layers are barriers to the release of fission product gases such as Kr and Xe. The SiC layer provides the primary barrier to release of metallic fission products not retained in the kernel, as transport across themore » SiC layer is rate limiting due to the greater permeability of the IPyC and OPyC layers to many metallic fission products. These attributes allow intact TRISO coatings to successfully retain most fission products released from the kernel, with the majority of released fission products during operation being due to defective, damaged, or failed coatings. This dominant release of fission products from compromised particles contributes to the overall source term in reactor; causing safety and maintenance concerns and limiting the lifetime of the fuel. Under these considerations, an understanding of the nature and frequency of compromised particles is an important part of predicting the expected fission product release and ensuring safe and efficient operation.« less

40 CFR 63.11166 - What General Provisions apply to primary beryllium production facilities?

Code of Federal Regulations, 2010 CFR

2010-07-01

... Primary Nonferrous Metals Area Sources-Zinc, Cadmium, and Beryllium Primary Beryllium Production Facilities § 63.11166 What General Provisions apply to primary beryllium production facilities? (a) You must... primary beryllium production facilities? 63.11166 Section 63.11166 Protection of Environment ENVIRONMENTAL...

Preliminary evaluation of septic-system absorption-field architecture types in a profile-limited soil.

PubMed

Mathis, Amanda J; Brye, Kristofor R; Dunn, Sam

2011-01-01

Managing household wastewater is an issue that affects hundreds of thousands of people in rural communities nationwide, many of whom rely on septic systems as their primary means of household wastewater disposal. Septic system absorption field products with architectures quite different from traditional pipe-and-gravel systems are being installed in many states with variances from initial design specifications. The objective of this study was to evaluate the performance, as measured by the in-product height of stored solution, of four differing absorption-field product architecture types in a profile-limited soil that was loaded at the maximum allowable rate based on soil morphology. Five chamber, two gravel-less pipe, two polystyrene aggregate, and four pipe-and-gravel systems were installed in a profile-limited, Captina silt loam soil (fine-silty, siliceous, active, mesic Typic Fragiudult) and dosed with raw effluent at rates determined by current State of Arkansas regulations via individual peristaltic pumps. Free-solution monitoring ports were installed within each product, where the depth to free solution was measured periodically and used to evaluate product performance. Data collected from January through August 2009 indicated that preliminary system performance was unaffected by product architecture type. All products performed similarly under dry soil conditions. However, differences among individual products were observed during periods of hydrologic stress (i.e., wet soil conditions). Surfacing of effluent was not observed atop any product, indicating that the current loading rate design method is functioning properly. Preliminary results indicate that some alternative absorption-field products perform similarly to the traditional pipe-and-gravel system, thus providing flexibility and options for homeowners. by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Ecosystem and physiological controls over methane production in northern wetlands

NASA Technical Reports Server (NTRS)

Valentine, David W.; Holland, Elisabeth A.; Schimel, David S.

1994-01-01

Peat chemistry appears to exert primary control over methane production rates in the Canadian Northern Wetlands Study (NOWES) area. We determined laboratory methane production rate potentials in anaerobic slurries of samples collected from a transect of sites through the NOWES study area. We related methane production rates to indicators of resistance to microbial decay (peat C: N and lignin: N ratios) and experimentally manipulated substrate availability for methanogenesis using ethanol (EtOH) and plant litter. We also determined responses of methane production to pH and temperature. Methane production potentials declined along the gradient of sites from high rates in the coastal fens to low rates in the interior bogs and were generally highest in surface layers. Strong relationships between CH4 production potentials and peat chemistry suggested that methanogenesis was limited by fermentation rates. Methane production at ambient pH responded strongly to substrate additions in the circumneutral fens with narrow lignin: N and C: N ratios (delta CH4/delta EtOH = 0.9-2.3 mg/g) and weakly in the acidic bogs with wide C: N and lignin: N ratios (delta CH4/delta EtOH = -0.04-0.02 mg/g). Observed Q(sub 10) values ranged from 1.7 to 4.7 and generally increased with increasing substrate availability, suggesting that fermentation rates were limiting. Titration experiments generally demonstrated inhibition of methanogenesis by low pH. Our results suggest that the low rates of methane emission observed in interior bogs during NOWES likely resulted from pH and substrate quality limitation of the fermentation step in methane production and thus reflect intrinsically low methane production potentials. Low methane emission rates observed during NOWES will likely be observed in other northern wetland regions with similar vegetation chemistry.

Modeling gross primary production in semi-arid Inner Mongolia using MODIS imagery and eddy covariance data

Treesearch

Ranjeet John; Jiquan Chen; Asko Noormets; Xiangming Xiao; Jianye Xu; Nan Lu; Shiping Chen

2013-01-01

We evaluate the modelling of carbon fluxes from eddy covariance (EC) tower observations in different water-limited land-cover/land-use (LCLU) and biome types in semi-arid Inner Mongolia, China. The vegetation photosynthesis model (VPM) and modified VPM (MVPM), driven by the enhanced vegetation index (EVI) and land-surface water index (LSWI), which were derived from the...

Carbon dioxide (CO2) levels this century will alter the protein, micronutrients, and vitamin content of rice grains with potential health consequences for the poorest rice-dependent countries

USDA-ARS?s Scientific Manuscript database

Globally, rice is the primary food crop and caloric source for the least economically developed countries, especially in Asia. Although studies have explored the impacts of increased carbon dioxide concentration, [CO2] and climate change on rice production, there is limited quantification of the di...

The effects of precipitation variability on C4 photosynthesis, net primary production and soil respiration in a Chihuahuan desert grassland

Treesearch

Michell L. Thomey

2012-01-01

Although the Earth's climate system has always been inherently variable, the magnitude and rate of anthropogenic climate change is subjecting ecosystems and the populations that they contain to novel environmental conditions. Because water is the most limiting resource, arid-semiarid ecosystems are likely to be highly responsive to future climate variability. The...

Contributions of water supply from the weathered bedrock zone to forest soil quality

Treesearch

James H. Witty; Robert C. Graham; Kenneth R. Hubbert; James A. Doolittle; Jonathan A. Wald

2003-01-01

One measure of forest soil quality is the ability of the soil to support tree growth. In mediterranean-type ecosystems, such as most of California's forests, there is virtually no rainfall during the summer growing season, so trees must rely on water stored within the substrate. Water is the primary limitation to productivity in these forests. Many forest soils in...

Spatial and temporal patterns of root distribution in developing stands of four woody crop species grown with drip irrigation and fertilization

Treesearch

Mark Coleman

2007-01-01

In forest trees, roots mediate such significant carbon fluxes as primary production and soil C02 efflux. Despite the central role of roots in these critical processes, information on root distribution during stand establishment is limited, yet must be described to accurately predict how various forest types, which are growing with a range of...

Does Lean healthcare improve patient satisfaction? A mixed-method investigation into primary care.

PubMed

Poksinska, Bozena Bonnie; Fialkowska-Filipek, Malgorzata; Engström, Jon

2017-02-01

Lean healthcare is claimed to contribute to improved patient satisfaction, but there is limited evidence to support this notion. This study investigates how primary-care centres working with Lean define and improve value from the patient's perspective, and how the application of Lean healthcare influences patient satisfaction. This paper contains two qualitative case studies and a quantitative study based on results from the Swedish National Patient Survey. Through the case studies, we investigated how primary-care organisations realised the principle of defining and improving value from the patient's perspective. In the quantitative study, we compared results from the patient satisfaction survey for 23 primary-care centres working with Lean with a control group of 23 care centres not working with Lean. We also analysed changes in patient satisfaction over time. Our case studies reveal that Lean healthcare implementations primarily target efficiency and little attention is paid to the patient's perspective. The quantitative study shows no significantly better results in patient satisfaction for primary-care centres working with Lean healthcare compared with those not working with Lean. Further, care centres working with Lean show no significant improvements in patient satisfaction over time. Lean healthcare implementations seem to have a limited impact on improving patient satisfaction. Care providers need to pay more attention to integrating the patient's perspective in the application of Lean healthcare. Value needs to be defined and value streams need to be improved based on both the knowledge and clinical expertise of care providers, and the preferences and needs of patients. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/.

Pet Food Palatability Evaluation: A Review of Standard Assay Techniques and Interpretation of Results with a Primary Focus on Limitations

PubMed Central

Aldrich, Gregory C.; Koppel, Kadri

2015-01-01

Simple Summary Palatability of pet foods is typically measured using a single-bowl or a two-bowl test. While these tests give a general understanding of the liking or preference of one food over another, opportunities exist for further method development. Abstract The pet food industry continues to grow steadily as a result of new innovative products. Quality control and product development tests for pet foods are typically conducted through palatability testing with dogs and cats. Palatability is the measure of intake of a food that indicates acceptance or the measure of preference of one food over another. Pet food palatability is most commonly measured using a single-bowl or a two-bowl assay. While these tests answer some questions about the animals’ perception of the food, there are many limitations as well. This review addresses some of these limitations and indicates opportunities for future research. PMID:26479136

40 CFR 63.11164 - What General Provisions apply to primary zinc production facilities?

Code of Federal Regulations, 2011 CFR

2011-07-01

... primary zinc production facilities? 63.11164 Section 63.11164 Protection of Environment ENVIRONMENTAL... Primary Nonferrous Metals Area Sources-Zinc, Cadmium, and Beryllium Primary Zinc Production Facilities § 63.11164 What General Provisions apply to primary zinc production facilities? (a) If you own or...

40 CFR 63.11164 - What General Provisions apply to primary zinc production facilities?

Code of Federal Regulations, 2010 CFR

2010-07-01

... primary zinc production facilities? 63.11164 Section 63.11164 Protection of Environment ENVIRONMENTAL... Primary Nonferrous Metals Area Sources-Zinc, Cadmium, and Beryllium Primary Zinc Production Facilities § 63.11164 What General Provisions apply to primary zinc production facilities? (a) If you own or...

Pervasive phosphorus limitation of tree species but not communities in tropical forests

NASA Astrophysics Data System (ADS)

Turner, Benjamin L.; Brenes-Arguedas, Tania; Condit, Richard

2018-03-01

Phosphorus availability is widely assumed to limit primary productivity in tropical forests, but support for this paradigm is equivocal. Although biogeochemical theory predicts that phosphorus limitation should be prevalent on old, strongly weathered soils, experimental manipulations have failed to detect a consistent response to phosphorus addition in species-rich lowland tropical forests. Here we show, by quantifying the growth of 541 tropical tree species across a steep natural phosphorus gradient in Panama, that phosphorus limitation is widespread at the level of individual species and strengthens markedly below a threshold of two parts per million exchangeable soil phosphate. However, this pervasive species-specific phosphorus limitation does not translate into a community-wide response, because some species grow rapidly on infertile soils despite extremely low phosphorus availability. These results redefine our understanding of nutrient limitation in diverse plant communities and have important implications for attempts to predict the response of tropical forests to environmental change.

Macronutrient supply, uptake and recycling in the coastal ocean of the west Antarctic Peninsula

NASA Astrophysics Data System (ADS)

Henley, Sian F.; Tuerena, Robyn E.; Annett, Amber L.; Fallick, Anthony E.; Meredith, Michael P.; Venables, Hugh J.; Clarke, Andrew; Ganeshram, Raja S.

2017-05-01

Nutrient supply, uptake and cycling underpin high primary productivity over the continental shelf of the west Antarctic Peninsula (WAP). Here we use a suite of biogeochemical and isotopic data collected over five years in northern Marguerite Bay to examine these macronutrient dynamics and their controlling biological and physical processes in the WAP coastal ocean. We show pronounced nutrient drawdown over the summer months by primary production which drives a net seasonal nitrate uptake of 1.83 mol N m-2 yr-1, equivalent to net carbon uptake of 146 g C m-2 yr-1. High primary production fuelled primarily by deep-sourced macronutrients is diatom-dominated, but non-siliceous phytoplankton also play a role. Strong nutrient drawdown in the uppermost surface ocean has the potential to cause transient nitrogen limitation before nutrient resupply and/or regeneration. Interannual variability in nutrient utilisation corresponds to winter sea ice duration and the degree of upper ocean mixing, implying susceptibility to physical climate change. The nitrogen isotope composition of nitrate (δ15NNO3) shows a utilisation signal during the growing seasons with a community-level net isotope effect of 4.19 ± 0.29‰. We also observe significant deviation of our data from modelled and observed utilisation trends, and argue that this is driven primarily by water column nitrification and meltwater dilution of surface nitrate. This study is important because it provides a detailed description of the nutrient biogeochemistry underlying high primary productivity at the WAP, and shows that surface ocean nutrient inventories in the Antarctic sea ice zone can be affected by intense recycling in the water column, meltwater dilution and sea ice processes, in addition to utilisation in the upper ocean.

Primary productivity of supraglacial snow algae communities on stratovolcanoes of the Pacific Northwest

NASA Astrophysics Data System (ADS)

Hamilton, T. L.; Havig, J. R.

2016-12-01

The majority of geomicrobiological research conducted on glacial systems to date have focused on glaciers that override primarily carbonate or granitic bedrock types, with little known of the processes that support microbial life in glacial systems overriding volcanic terrains (e.g., basalt or andesite). To better constrain the role of the supraglacial ecosystems in the carbon and nitrogen cycles, to gain insight into microbiome composition and function in alpine glacial systems overriding volcanic terrains, and to constrain potential elemental sequestration or release through weathering processes associated with snow algae communities, we examined the microbial community structure and primary productivity in snow on and near alpine glaciers on stratovolcanoes in the Cascade Range of the Pacific Northwest. Here we present the first published values for carbon fixation rates of snow algae communities on alpine glaciers in the Pacific Northwest. We observed varying levels of light-dependent carbon fixation on snowfields on or near glaciers on Mt Hood, Mt Adams and North Sister. Recovery of algal 18S rRNA transcripts is consistent with previous studies indicating the majority of primary productivity on snow and ice can be attributed to photoautotrophic algae. In contrast to previous observations of glacial ecosystems, our geochemical, isotopic and microcosm data suggest these assemblages are not limited by phosphorus or fixed nitrogen availability. Furthermore, our data indicate these snow assemblages actively sequester Fe, Mn, and P leached from minerals sourced from the local rocks. Our observations of light-dependent primary productivity on snow are consistent with similar studies in polar ecosystems; however, our data underscore the need for similar studies on glacier surfaces and seasonal snowfields to better constrain the role of local bedrock and nutrient delivery on carbon fixation and biogeochemical cycling in these ecosystems.

Trace-element budgets in the Ohio/Sunbury shales of Kentucky: Constraints on ocean circulation and primary productivity in the Devonian-Mississippian Appalachian Basin

USGS Publications Warehouse

Perkins, R.B.; Piper, D.Z.; Mason, C.E.

2008-01-01

The hydrography of the Appalachian Basin in late Devonian-early Mississippian time is modeled based on the geochemistry of black shales and constrained by others' paleogeographic reconstructions. The model supports a robust exchange of basin bottom water with the open ocean, with residence times of less than forty years during deposition of the Cleveland Shale Member of the Ohio Shale. This is counter to previous interpretations of these carbon-rich units having accumulated under a stratified and stagnant water column, i.e., with a strongly restricted bottom bottom-water circulation. A robust circulation of bottom waters is further consistent with the palaeoclimatology, whereby eastern trade-winds drove upwelling and arid conditions limited terrestrial inputs of siliciclastic sediment, fresh waters, and riverine nutrients. The model suggests that primary productivity was high (~ 2??g C m- 2 d- 1), although no higher than in select locations in the ocean today. The flux of organic carbon settling through the water column and its deposition on the sea floor was similar to fluxes found in modern marine environments. Calculations based on the average accumulation rate of the marine fraction of Ni suggest the flux of organic carbon settling out of the water column was approximately 9% of primary productivity, versus an accumulation rate (burial) of organic carbon of 0.5% of primary productivity. Trace-element ratios of V:Mo and Cr:Mo in the marine sediment fraction indicate that bottom waters shifted from predominantly anoxic (sulfate reducing) during deposition of the Huron Shale Member of the Ohio Shale to predominantly suboxic (nitrate reducing) during deposition of the Cleveland Shale Member and the Sunbury Shale, but with anoxic conditions occurring intermittently throughout this period. ?? 2008 Elsevier B.V.

Solvent and viscosity effects on the rate-limiting product release step of glucoamylase during maltose hydrolysis.

PubMed

Sierks, M R; Sico, C; Zaw, M

1997-01-01

Release of product from the active site is the rate-limiting step in a number of enzymatic reactions, including maltose hydrolysis by glucoamylase (GA). With GA, an enzymatic conformational change has been associated with the product release step. Solvent characteristics such as viscosity can strongly influence protein conformational changes. Here we show that the rate-limiting step of GA has a rather complex dependence on solvent characteristics. Seven different cosolvents were added to the GA/maltose reaction solution. Five of the cosolvents, all having an ethylene glycol base, resulted in an increase in activity at low concentration of cosolvent and variable decreases in activity at higher concentrations. The increase in enzyme activity was dependent on polymer length of the cosolvent; the longer the polymer, the lower the concentration needed. The maximum increase in catalytic activity at 45 degrees C (40-45%) was obtained with the three longest polymers (degree of polymerization from 200 to 8000). A further increase in activity to 60-65% was obtained at 60 degrees C. The linear relationship between ln(kcat) and (viscosity)2 obtained with all the cosolvents provides further evidence that product release is the rate-limiting step in the GA catalytic mechanism. A substantial increase in the turnover rate of GA by addition of relatively small amounts of a cosolvent has potential applications for the food industry where high-fructose corn syrup (HFCS) is one of the primary products produced with GA. Since maltodextrin hydrolysis by GA is by far the slowest step in the production of HFCS, increasing the catalytic rate of GA can substantially reduce the process time.

Effects of sea ice cover on satellite-detected primary production in the Arctic Ocean

PubMed Central

Lee, Zhongping; Mitchell, B. Greg; Nevison, Cynthia D.

2016-01-01

The influence of decreasing Arctic sea ice on net primary production (NPP) in the Arctic Ocean has been considered in multiple publications but is not well constrained owing to the potentially large errors in satellite algorithms. In particular, the Arctic Ocean is rich in coloured dissolved organic matter (CDOM) that interferes in the detection of chlorophyll a concentration of the standard algorithm, which is the primary input to NPP models. We used the quasi-analytic algorithm (Lee et al. 2002 Appl. Opti. 41, 5755−5772. (doi:10.1364/AO.41.005755)) that separates absorption by phytoplankton from absorption by CDOM and detrital matter. We merged satellite data from multiple satellite sensors and created a 19 year time series (1997–2015) of NPP. During this period, both the estimated annual total and the summer monthly maximum pan-Arctic NPP increased by about 47%. Positive monthly anomalies in NPP are highly correlated with positive anomalies in open water area during the summer months. Following the earlier ice retreat, the start of the high-productivity season has become earlier, e.g. at a mean rate of −3.0 d yr−1 in the northern Barents Sea, and the length of the high-productivity period has increased from 15 days in 1998 to 62 days in 2015. While in some areas, the termination of the productive season has been extended, owing to delayed ice formation, the termination has also become earlier in other areas, likely owing to limited nutrients. PMID:27881759

Effects of sea ice cover on satellite-detected primary production in the Arctic Ocean.

PubMed

Kahru, Mati; Lee, Zhongping; Mitchell, B Greg; Nevison, Cynthia D

2016-11-01

The influence of decreasing Arctic sea ice on net primary production (NPP) in the Arctic Ocean has been considered in multiple publications but is not well constrained owing to the potentially large errors in satellite algorithms. In particular, the Arctic Ocean is rich in coloured dissolved organic matter (CDOM) that interferes in the detection of chlorophyll a concentration of the standard algorithm, which is the primary input to NPP models. We used the quasi-analytic algorithm (Lee et al 2002 Appl. Opti. 41, 5755-5772. (doi:10.1364/AO.41.005755)) that separates absorption by phytoplankton from absorption by CDOM and detrital matter. We merged satellite data from multiple satellite sensors and created a 19 year time series (1997-2015) of NPP. During this period, both the estimated annual total and the summer monthly maximum pan-Arctic NPP increased by about 47%. Positive monthly anomalies in NPP are highly correlated with positive anomalies in open water area during the summer months. Following the earlier ice retreat, the start of the high-productivity season has become earlier, e.g. at a mean rate of -3.0 d yr -1 in the northern Barents Sea, and the length of the high-productivity period has increased from 15 days in 1998 to 62 days in 2015. While in some areas, the termination of the productive season has been extended, owing to delayed ice formation, the termination has also become earlier in other areas, likely owing to limited nutrients. © 2016 The Author(s).

Heterogeneity in Primary Productivity Influences Competitive Interactions between Red Deer and Alpine Chamois

PubMed Central

Anderwald, Pia; Haller, Rudolf M.; Filli, Flurin

2016-01-01

Habitat heterogeneity can promote coexistence between herbivores of different body size limited to different extents by resource quantity and quality. Red deer (Cervus elaphus) are known as superior competitors to smaller species with similar diets. We compared competitive interactions and habitat use between red deer and Alpine chamois (Rupicapra rupicapra) in two adjacent valleys in a strictly protected area in the Central Alps. Red deer density was higher in the valley with higher primary productivity. Only here was horn growth in kid and yearling chamois (as a measure for body condition) negatively correlated with red deer population size, suggesting interspecific competition, and chamois selected meadows with steeper slopes and lower productivity than available on average. Conversely, red deer selected meadows of high productivity, particularly in the poorer area. As these were located mainly at lower elevations, this led to strong altitudinal segregation between the two species here. Local differences in interspecific competition thus coincided with differences in habitat preference and–segregation between areas. This suggests that spatial habitat and resource heterogeneity at the scale of adjacent valleys can provide competition refuges for competitively inferior mountain ungulates which differ from their superior competitor in their metabolic requirements. PMID:26824867

Sequential nutrient uptake as a potential mechanism for phytoplankton to maintain high primary productivity and balanced nutrient stoichiometry

NASA Astrophysics Data System (ADS)

Yin, Kedong; Liu, Hao; Harrison, Paul J.

2017-05-01

We hypothesize that phytoplankton have the sequential nutrient uptake strategy to maintain nutrient stoichiometry and high primary productivity in the water column. According to this hypothesis, phytoplankton take up the most limiting nutrient first until depletion, continue to draw down non-limiting nutrients and then take up the most limiting nutrient rapidly when it is available. These processes would result in the variation of ambient nutrient ratios in the water column around the Redfield ratio. We used high-resolution continuous vertical profiles of nutrients, nutrient ratios and on-board ship incubation experiments to test this hypothesis in the Strait of Georgia. At the surface in summer, ambient NO3- was depleted with excess PO43- and SiO4- remaining, and as a result, both N : P and N : Si ratios were low. The two ratios increased to about 10 : 1 and 0. 45 : 1, respectively, at 20 m. Time series of vertical profiles showed that the leftover PO43- continued to be removed, resulting in additional phosphorus storage by phytoplankton. The N : P ratios at the nutricline in vertical profiles responded differently to mixing events. Field incubation of seawater samples also demonstrated the sequential uptake of NO3- (the most limiting nutrient) and then PO43- and SiO4- (the non-limiting nutrients). This sequential uptake strategy allows phytoplankton to acquire additional cellular phosphorus and silicon when they are available and wait for nitrogen to become available through frequent mixing of NO3- (or pulsed regenerated NH4). Thus, phytoplankton are able to maintain high productivity and balance nutrient stoichiometry by taking advantage of vigorous mixing regimes with the capacity of the stoichiometric plasticity. To our knowledge, this is the first study to show the in situ dynamics of continuous vertical profiles of N : P and N : Si ratios, which can provide insight into the in situ dynamics of nutrient stoichiometry in the water column and the inference of the transient status of phytoplankton nutrient stoichiometry in the coastal ocean.

Feeding and production of zooplankton in the Catalan Sea (NW Mediterranean)

NASA Astrophysics Data System (ADS)

Saiz, Enric; Calbet, Albert; Atienza, Dacha; Alcaraz, Miquel

2007-08-01

Zooplankton are key components of the structure and functioning of marine planktonic food webs. They are the main link of planktonic primary production towards top pelagic consumer levels (fish), and play a relevant role on the nutrient recycling in the water column and on the export of particulate matter out of the photic zone. In this paper, we review the present knowledge on the feeding and production of zooplankton in the Catalan Sea (NW Mediterranean), with special emphasis on copepods. Feeding of zooplankton in the Catalan Sea appears typically food limited, with average daily rations on a yearly basis in the order of 48% body C d -1. Heterotrophic prey constitute a relevant fraction of their diet, as an alternative to the scarce phytoplankton in the area. From a structural point of view, the trophic impact and control of their prey populations are low on standing stocks but, at certain times, zooplankton can exert a meaningful effect on their prey production. Regarding zooplankton production, the available estimates of growth rates in the area are based on the egg production rate of copepods. Egg production rates appear to be limited, especially in summer. Tentative estimates of copepod production in the area are in the order of 20-40 mg C m -2 d -1. In conclusion, this review confirms that the oligotrophic character of the NW Mediterranean constrains the feeding activity and production of zooplankton.

Directional and Spectral Irradiance in Ocean Models: Effects on Simulated Global Phytoplankton, Nutrients, and Primary Production

NASA Technical Reports Server (NTRS)

Gregg, Watson W.; Rousseaux, Cecile S.

2016-01-01

The importance of including directional and spectral light in simulations of ocean radiative transfer was investigated using a coupled biogeochemical-circulation-radiative model of the global oceans. The effort focused on phytoplankton abundances, nutrient concentrations and vertically-integrated net primary production. The importance was approached by sequentially removing directional (i.e., direct vs. diffuse) and spectral irradiance and comparing results of the above variables to a fully directionally and spectrally-resolved model. In each case the total irradiance was kept constant; it was only the pathways and spectral nature that were changed. Assuming all irradiance was diffuse had negligible effect on global ocean primary production. Global nitrate and total chlorophyll concentrations declined by about 20% each. The largest changes occurred in the tropics and sub-tropics rather than the high latitudes, where most of the irradiance is already diffuse. Disregarding spectral irradiance had effects that depended upon the choice of attenuation wavelength. The wavelength closest to the spectrally-resolved model, 500 nm, produced lower nitrate (19%) and chlorophyll (8%) and higher primary production (2%) than the spectral model. Phytoplankton relative abundances were very sensitive to the choice of non-spectral wavelength transmittance. The combined effects of neglecting both directional and spectral irradiance exacerbated the differences, despite using attenuation at 500 nm. Global nitrate decreased 33% and chlorophyll decreased 24%. Changes in phytoplankton community structure were considerable, representing a change from chlorophytes to cyanobacteria and coccolithophores. This suggested a shift in community function, from light-limitation to nutrient limitation: lower demands for nutrients from cyanobacteria and coccolithophores favored them over the more nutrient-demanding chlorophytes. Although diatoms have the highest nutrient demands in the model, their relative abundances were generally unaffected because they only prosper in nutrient-rich regions, such as the high latitudes and upwelling regions, which showed the fewest effects from the changes in radiative simulations. The results showed that including directional and spectral irradiance when simulating the ocean light field can be important for ocean biology, but the magnitude varies with variables and regions. The quantitative results are intended to assist ocean modelers when considering improved irradiance representations relative to other processes or variables associated with the issues of interest.

Research productivity and scholarly impact of APA-accredited school psychology programs: 2005-2009.

PubMed

Kranzler, John H; Grapin, Sally L; Daley, Matt L

2011-12-01

This study examined the research productivity and scholarly impact of faculty in APA-accredited school psychology programs using data in the PsycINFO database from 2005 to 2009. We ranked doctoral programs on the basis of authorship credit, number of publications, and number of citations. In addition, we examined the primary publication outlets of school psychology program faculties and the major themes of research during this time period. We compared our results with those of a similar study that examined data from a decade earlier. Limitations and implications of this study are also discussed. Published by Elsevier Ltd.

Oxidation of cefalexin by thermally activated persulfate: Kinetics, products, and antibacterial activity change.

PubMed

Qian, Yajie; Xue, Gang; Chen, Jiabin; Luo, Jinming; Zhou, Xuefei; Gao, Pin; Wang, Qi

2018-05-03

While the widely used β-lactam antibiotics, such as cephalosporins, are known to be susceptible to oxidation by sulfate radical (SO 4 - ), comprehensive study about SO 4 - -induced oxidation of cephalosporins is still limited, such as the impact of water matrices, and the structure and antibacterial activity of transformation products. Herein, the oxidation of cefalexin (CFX), a most frequently detected cephalosporin, was systematically investigated by thermally activated persulfate (PS). CFX oxidation followed pseudo-first-order kinetics, and SO 4 - dominantly contributed to the overall oxidation of CFX. The impact of water matrices, such as Cl - , HCO 3 - and natural organic matter, on CFX degradation was predicted using a pseudo-steady-state kinetic model. The secondary reactive species, such as chlorine and carbonate radicals, were found to contribute to CFX degradation. Product analysis indicated oxidation of CFX to six products (molecular weight of 363), with two stereoisomeric sulfoxides as the primary oxidation products. It was thus suggested that the primary amine on the side chain, and the thioether sulfur and double bond on the six-membered ring were the reactive sites of CFX towards SO 4 - oxidation. Antibacterial activity assessment showed that the biological activity of CFX solution was significantly diminished after treatment by the thermally activated PS. Copyright © 2018 Elsevier B.V. All rights reserved.

Nitrate fertilisation does not enhance CO2 responses in two tropical seagrass species

NASA Astrophysics Data System (ADS)

Ow, Y. X.; Vogel, N.; Collier, C. J.; Holtum, J. A. M.; Flores, F.; Uthicke, S.

2016-03-01

Seagrasses are often considered “winners” of ocean acidification (OA); however, seagrass productivity responses to OA could be limited by nitrogen availability, since nitrogen-derived metabolites are required for carbon assimilation. We tested nitrogen uptake and assimilation, photosynthesis, growth, and carbon allocation responses of the tropical seagrasses Halodule uninervis and Thalassia hemprichii to OA scenarios (428, 734 and 1213 μatm pCO2) under two nutrients levels (0.3 and 1.9 μM NO3-). Net primary production (measured as oxygen production) and growth in H. uninervis increased with pCO2 enrichment, but were not affected by nitrate enrichment. However, nitrate enrichment reduced whole plant respiration in H. uninervis. Net primary production and growth did not show significant changes with pCO2 or nitrate by the end of the experiment (24 d) in T. hemprichii. However, nitrate incorporation in T. hemprichii was higher with nitrate enrichment. There was no evidence that nitrogen demand increased with pCO2 enrichment in either species. Contrary to our initial hypothesis, nutrient increases to levels approximating present day flood plumes only had small effects on metabolism. This study highlights that the paradigm of increased productivity of seagrasses under ocean acidification may not be valid for all species under all environmental conditions.

Nitrate fertilisation does not enhance CO2 responses in two tropical seagrass species.

PubMed

Ow, Y X; Vogel, N; Collier, C J; Holtum, J A M; Flores, F; Uthicke, S

2016-03-15

Seagrasses are often considered "winners" of ocean acidification (OA); however, seagrass productivity responses to OA could be limited by nitrogen availability, since nitrogen-derived metabolites are required for carbon assimilation. We tested nitrogen uptake and assimilation, photosynthesis, growth, and carbon allocation responses of the tropical seagrasses Halodule uninervis and Thalassia hemprichii to OA scenarios (428, 734 and 1213 μatm pCO2) under two nutrients levels (0.3 and 1.9 μM NO3(-)). Net primary production (measured as oxygen production) and growth in H. uninervis increased with pCO2 enrichment, but were not affected by nitrate enrichment. However, nitrate enrichment reduced whole plant respiration in H. uninervis. Net primary production and growth did not show significant changes with pCO2 or nitrate by the end of the experiment (24 d) in T. hemprichii. However, nitrate incorporation in T. hemprichii was higher with nitrate enrichment. There was no evidence that nitrogen demand increased with pCO2 enrichment in either species. Contrary to our initial hypothesis, nutrient increases to levels approximating present day flood plumes only had small effects on metabolism. This study highlights that the paradigm of increased productivity of seagrasses under ocean acidification may not be valid for all species under all environmental conditions.

Nitrate fertilisation does not enhance CO2 responses in two tropical seagrass species

PubMed Central

Ow, Y. X.; Vogel, N.; Collier, C. J.; Holtum, J. A. M.; Flores, F.; Uthicke, S.

2016-01-01

Seagrasses are often considered “winners” of ocean acidification (OA); however, seagrass productivity responses to OA could be limited by nitrogen availability, since nitrogen-derived metabolites are required for carbon assimilation. We tested nitrogen uptake and assimilation, photosynthesis, growth, and carbon allocation responses of the tropical seagrasses Halodule uninervis and Thalassia hemprichii to OA scenarios (428, 734 and 1213 μatm pCO2) under two nutrients levels (0.3 and 1.9 μM NO3−). Net primary production (measured as oxygen production) and growth in H. uninervis increased with pCO2 enrichment, but were not affected by nitrate enrichment. However, nitrate enrichment reduced whole plant respiration in H. uninervis. Net primary production and growth did not show significant changes with pCO2 or nitrate by the end of the experiment (24 d) in T. hemprichii. However, nitrate incorporation in T. hemprichii was higher with nitrate enrichment. There was no evidence that nitrogen demand increased with pCO2 enrichment in either species. Contrary to our initial hypothesis, nutrient increases to levels approximating present day flood plumes only had small effects on metabolism. This study highlights that the paradigm of increased productivity of seagrasses under ocean acidification may not be valid for all species under all environmental conditions. PMID:26976685

Visual Literacy in Primary Science: Exploring Anatomy Cross-Section Production Skills

NASA Astrophysics Data System (ADS)

García Fernández, Beatriz; Ruiz-Gallardo, José Reyes

2017-04-01

Are children competent producing anatomy cross-sections? To answer this question, we carried out a case study research aimed at testing graphic production skills in anatomy of nutrition. The graphics produced by 118 children in the final year of primary education were analysed. The children had to draw a diagram of a human cross section, integrating knowledge of anatomy acquired from longitudinal sections. The results show that they have very limited skills in producing these graphics judging by the dimensions (scale, shape, organs represented and its organization inside the section) and their conception of human anatomy at thoracic level (location of the organs, elements in the spaces between them and connections between organs). The results also indicate that the only exposure to cross-sections in daily life is not enough by itself to draw them correctly, so this type of graphic production should be addressed from the earliest stages of education, since it contributes to the development of visual literacy, and this is a crucial skill when it comes to learning science concepts and developing scientific literacy.

Experimental Determination of Li, Be and B Partitioning During CAI Crystallization

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ryerson, F J; Brenan, J M; Phinney, D L

2005-01-12

The main focus of the work is to develop a better understanding of the distribution of the elements B, Be and Li in melilite, fassaitic clinop clinopy-roxene, anorthite and spinel, which are the primary constituents of calcium-aluminum-rich inclusions (CAIs). These elements are the parent or decay products of short-lived nuclides (specifically, {sup 7}Be and {sup 10}Be) formed by cosmic ray spallation reactions on silicon and oxygen. Recent observations suggest that some CAIs contain ''fossil'' {sup 7}Be and {sup 10}Be in the form of ''excess'' amounts of their decay products (B and Li). The exact timing of {sup 7}Be and {supmore » 10}Be production is unknown, but if it occurred early in CAI history, it could constrain the birthplace of CAIs to be within a limited region near the infant sun. Other interpretations are possible, however, and bear little significance to early CAI genesis. In order to interpret the anomalies as being ''primary'', and thus originating at high temperature, information on the intermineral partitioning of both parent and daughter elements is required.« less

Bench-Scale Evaluation of the Genifuel Hydrothermal Processing Technology for Wastewater Solids

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marrone, Philip A.; Elliott, Douglas C.; Billing, Justin M.

Hydrothermal Liquefaction (HTL) and Catalytic Hydrothermal Gasification (CHG) proof-of-concept bench-scale tests were performed to assess the potential of the Genifuel hydrothermal process technology for handling municipal wastewater sludge. HTL tests were conducted at 300-350°C and 20 MPa on three different feeds: primary sludge (11.9 wt% solids), secondary sludge (9.7 wt% solids), and post-digester sludge (also referred to as digested solids) (16.0 wt% solids). Corresponding CHG tests were conducted at 350°C and 20 MPa on the HTL aqueous phase output using a ruthenium based catalyst. A comprehensive analysis of all feed and effluent phases was also performed. Total mass and carbonmore » balances closed to within ± 15% in all but one case. Biocrude yields from HTL tests were 37%, 25%, and 34% for primary sludge, secondary sludge, and digested solids feeds, respectively. The biocrude yields accounted for 59%, 39%, and 49% of the carbon in the feed for primary sludge, secondary sludge, and digested solids feeds, respectively. Biocrude composition and quality were comparable to that seen with biocrudes generated from algae feeds. Subsequent hydrotreating (i.e., upgrading) of the biocrude produced from primary sludge and digested solids resulted in a product with comparable physical and chemical properties to petroleum crude oil. CHG product gas consisted primarily of methane, with methane yields (relative to CHG input) on a carbon basis of 47%, 61%, and 64% for aqueous feeds that were the output of HTL tests with primary sludge, secondary sludge, and digested solids, respectively. Siloxane concentrations in the CHG product gas were below the detection limit and well below fuel input composition limits set by several engine manufacturers. Relative to that of the sludge feeds, the HTL-CHG process resulted in a reduction in chemical oxygen demand (COD) of greater than 99.9% and a reduction in residual solids for disposal of 94-99%. The test results, as a whole, support further long term testing in a larger scale integrated system that is representative of what would be installed at a water resource recovery facility (WRRF) in order to fully assess the technical and economic viability of this technology for wastewater sludge treatment.« less

Net primary productivity, allocation pattern and carbon use efficiency in an apple orchard assessed by integrating eddy-covariance, biometric and continuous soil chamber measurements

NASA Astrophysics Data System (ADS)

Zanotelli, D.; Montagnani, L.; Manca, G.; Tagliavini, M.

2012-10-01

Carbon use efficiency (CUE) is a functional parameter that could possibly link the current increasingly accurate global estimates of gross primary production with those of net ecosystem exchange, for which global predictors are still unavailable. Nevertheless, CUE estimates are actually available for only a few ecosystem types, while information regarding agro-ecosystems is scarce, in spite of the simplified spatial structure of these ecosystems that facilitates studies on allocation patterns and temporal growth dynamics. We combined three largely deployed methods, eddy covariance, soil respiration and biometric measurements, to assess monthly values of CUE, net primary production (NPP) and allocation patterns in different plant organs in an apple orchard during a complete year (2010). We applied a~measurement protocol optimized for quantifying monthly values of carbon fluxes in this ecosystem type, which allows for a cross-check between estimates obtained from different methods. We also attributed NPP components to standing biomass increments, detritus cycle feeding and lateral exports. We found that in the apple orchard both net ecosystem production and gross primary production on yearly basis, 380 ± 30 g C m-2 and 1263 ± 189 g C m-2 respectively, were of a magnitude comparable to those of natural forests growing in similar climate conditions. The largest differences with respect to forests are in the allocation pattern and in the fate of produced biomass. The carbon sequestered from the atmosphere was largely allocated to production of fruits: 49% of annual NPP was taken away from the ecosystem through apple production. Organic material (leaves, fine root litter, pruned wood and early fruit falls) contributing to the detritus cycle was 46% of the NPP. Only 5% was attributable to standing biomass increment, while this NPP component is generally the largest in forests. The CUE, with an annual average of 0.71 ± 0.09, was higher than the previously suggested constant values of 0.47-0.50. Low nitrogen investment in fruits, the limited root-apparatus, and the optimal growth temperature and nutritional condition observed at the site are suggested to be explanatory variables for the high CUE observed.

Spring-summer net community production, new production, particle export and related water column biogeochemical processes in the marginal sea ice zone of the Western Antarctic Peninsula 2012-2014.

PubMed

Ducklow, Hugh W; Stukel, Michael R; Eveleth, Rachel; Doney, Scott C; Jickells, Tim; Schofield, Oscar; Baker, Alex R; Brindle, John; Chance, Rosie; Cassar, Nicolas

2018-06-28

New production (New P, the rate of net primary production (NPP) supported by exogenously supplied limiting nutrients) and net community production (NCP, gross primary production not consumed by community respiration) are closely related but mechanistically distinct processes. They set the carbon balance in the upper ocean and define an upper limit for export from the system. The relationships, relative magnitudes and variability of New P (from 15 NO 3 - uptake), O 2  : argon-based NCP and sinking particle export (based on the 238 U :  234 Th disequilibrium) are increasingly well documented but still not clearly understood. This is especially true in remote regions such as polar marginal ice zones. Here we present a 3-year dataset of simultaneous measurements made at approximately 50 stations along the Western Antarctic Peninsula (WAP) continental shelf in midsummer (January) 2012-2014. Net seasonal-scale changes in water column inventories (0-150 m) of nitrate and iodide were also estimated at the same stations. The average daily rates based on inventory changes exceeded the shorter-term rate measurements. A major uncertainty in the relative magnitude of the inventory estimates is specifying the start of the growing season following sea-ice retreat. New P and NCP(O 2 ) did not differ significantly. New P and NCP(O 2 ) were significantly greater than sinking particle export from thorium-234. We suggest this is a persistent and systematic imbalance and that other processes such as vertical mixing and advection of suspended particles are important export pathways.This article is part of the theme issue 'The marine system of the west Antarctic Peninsula: status and strategy for progress in a region of rapid change'. © 2018 The Author(s).

DoD Involvement in the Counterdrug Effort, Contributions and Limitations

DTIC Science & Technology

1997-03-01

indoors as well.16 Marijuana production and distribution is highly decentralized and varies from large vertically organized groups to small...OF INTEREST 35 Marijuana 35 Cocaine 36 Heroin 37 APPENDIX B: THE 1996 NATIONAL DRUG CONTROL STRATEGY 39 GLOSSARY 42 BIBLIOGRAPHY 43 IV...industry. Since the vast majority of illicit drugs are imported, we will then examine the sources of the three primary drugs of interest, marijuana

Changing climate in the Lake Superior region: a case study of the June 2012 flood and its effects on the western-lake water column

NASA Astrophysics Data System (ADS)

Minor, E. C.; Forsman, B.; Guildford, S. J.

2013-12-01

In Lake Superior, the world's largest freshwater lake by area, we are seeing annual surface-water temperature increases outpacing those of the overlying atmosphere. We are also seeing ever earlier onsets of water-column stratification (in data sets from the mid-1980s to the present). In Minnesota, including the Lake Superior watershed, precipitation patterns are also shifting toward fewer and more extreme storm events, such as the June 2012 solstice flood, which impacted the western Lake Superior basin. We are interested in how such climatological changes will affect nutrient and carbon biogeochemistry in Lake Superior. The lake is currently an oligotrophic system exhibiting light limitation of primary production in winter and spring, with summer primary production generally limited by phosphorus and sometimes co-limited by iron. Analyses in the western arm of Lake Superior showed that the June 2012 flood brought large amounts of sediment and colored dissolved organic matter (CDOM) from the watershed into the lake. There was initially a ~50-fold spike in the total phosphorus concentrations (and a 5 fold spike in soluble reactive phosphorus) in flood-impacted waters. This disappeared rapidly, in large part due to sediment settling and did not lead to an increase in chlorophyll concentrations at monitored sampling sites. Instead, lake phytoplankton appeared light limited by a surface lens of warm water enriched in CDOM that persisted for over a month after the flood event itself. Our observations highlight the need for continuing research on these complex in-lake processes in order to make accurate predictions about longer term impacts of these large episodic inputs in CDOM, sediment, and nutrient loading.

A survey analysis of indigenous goat production in communal farming systems of Botswana.

PubMed

Monau, P I; Visser, C; Nsoso, S J; Van Marle-Köster, E

2017-08-01

A total of 153 communal farmers in four agro-ecological regions of Botswana were interviewed using a structured questionnaire. The aims of the survey were to characterise existing communal goat production systems, evaluate the importance of goats to farmers and identify breeding practices and constraints encountered in goat production in Botswana. Data was collected on socio-economic parameters, general and breeding management practices and major constraints limiting goat production in Botswana. All respondents were small-scale communal farmers with 63% respondents practising mixed crop-livestock farming and 37% keeping livestock as their primary activity. The majority (33%) of respondents were older than 60 years. Over 80% of the farmers kept goats for cash required for tuition, school uniforms and household commodities as well as re-stocking of animals. Most farmers (62%) kept indigenous crossed genotypes. Generally, uncontrolled mating was practised with the majority of farmers (41%) using on-farm reared bucks for more than two years of breeding and communal bucks (36%) as an alternative. The major constraints limiting goat productivity in communal areas included uncontrolled breeding, predators, theft and diseases. Issues raised by farmers should be considered in designing and implementing effective breeding programs for goats to improve their overall productivity and contribution to poverty alleviation in these communities.

Environmental factors controlling phytoplankton productivity and phenology in the Southern Ocean

NASA Astrophysics Data System (ADS)

Ardyna, M.; Claustre, H.; Sallee, J. B.; Gentili, B.; D'Ortenzio, F.

2016-02-01

The Southern Ocean (SO), highly sensitive to climate change, is currently experiencing a rapid warming and freshening. Such drastic hydrographical changes may significantly alter the SO's biological carbon pump (i.e., the efficiency of primary production and its transfers to higher trophic levels and/or sequestration to depth). However, before making any predictions, a better understanding of the biogeography and environmental factors controlling phytoplankton processes (i.e., productivity and phenology) in the Southern Ocean is clearly needed. We present here a bio-regionalization of the SO from satellite-derived observations, where a range of three orders of magnitude of productivity is observed. A clear latitudinal gradient in the bloom initiation was underpinned following the light regime, with some exception in well-mixed and sea-ice edge areas. Environmental factors controlling the phytoplankton phenology and productivity appear to be completely decoupled. Phytoplankton productivity in the SO is clearly associated to both shallow areas and front locations, where iron limitation seems to be less pronounced. These findings will give us a more comprehensive understanding in both space and time of the limiting factors of PP (i.e., nutrients, light-mixing regime…), which are of fundamental interest for identifying and explaining potential ongoing changes in SO's marine ecosystems.

Light dose versus rate of delivery: implications for macroalgal productivity.

PubMed

Desmond, Matthew J; Pritchard, Daniel W; Hepburn, Christopher D

2017-06-01

The role of how light is delivered over time is an area of macroalgal photosynthesis that has been overlooked but may play a significant role in controlling rates of productivity and the structure and persistence of communities. Here we present data that quantify the relative influence of total quantum dose and delivery rate on the photosynthetic productivity of five ecologically important Phaeophyceae species from southern New Zealand. Results suggested that greater net oxygen production occurs when light is delivered at a lower photon flux density (PFD) over a longer period compared to a greater PFD over a shorter period, given the same total dose. This was due to greater efficiency (α) at a lower PFD which, for some species, meant a compensatory effect can occur. This resulted in equal or greater productivity even when the total quantum dose of the lower PFD was significantly reduced. It was also shown that light limitation at Huriawa Peninsula, where macroaglae were sourced, may be restricting the acclimation potential of species at greater depths, and that even at shallow depth periods of significant light limitation are likely to occur. This research is of particular interest as the variability of light delivery to coastal reef systems increases as a result of anthropogenic disturbances, and as the value of in situ community primary productivity estimates is recognised.

Primary production and microbial activity in the euphotic zone of Lake Baikal (Southern Basin) during late winter

NASA Astrophysics Data System (ADS)

Straškrábová, V.; Izmest'yeva, L. R.; Maksimova, E. A.; Fietz, S.; Nedoma, J.; Borovec, J.; Kobanova, G. I.; Shchetinina, E. V.; Pislegina, E. V.

2005-04-01

Three years of regular weekly/biweekly monitoring of seasonal changes in temperature, transparency, chlorophyll a (CHL) and bacteria [erythrosine-stained microscopic counts and cultivable colony forming units (CFUs)] at the vertical profile in the South basin of Lake Baikal (51°54'195″N, 105°04'235″E, depth 800 m) were evaluated. In more detail, the structure and function of phytoplankton and the microbial loop in the euphotic layer at the same site were investigated during the late-winter-early-spring period under the ice. The depth of euphotic zone (up to 1% of surface irradiation) was 35 to 40 m. Primary production was measured three times a week with the 14C method in 2, 10, 20, 30 and 40 m. Maximum production was found in 10 m, with lower values towards the surface (light inhibition) and towards the lower layers. The total production in cells larger than 1 μm in the column (0-40 m) was 204-240 mg C d -1 m -2, 30-40% of it being in cells 1-3 μm (mostly picocyanobacteria), which represented roughly 9% of the total chlorophyll a (estimated from pigment analyses). A major part of phytoplankton biomass was formed by diatoms ( Synedra acus Hust., Asterionella formosa Hass. and Stephanodiscus meyerii Genkal & Popovskaya). Total production (including extracellular, dissolved organic matter) was 235-387 mg C day -1 m -2, and the exudates were readily used by bacteria (particles 0.2-1 μm). This part amounted to 1-5% of cellular production in 2 to 20 m and 11-77% of cellular production in 20-40 m, i.e., in light-limited layers. From 0 to 30 m, chlorophyll a concentration was 0.8 to 1.3 μg l -1, wherefrom it decreased rapidly to 0.1 μg l -1 towards the depth of 40 m. Bacteria (DAPI-stained microscopic counts) reached 0.5-1.4×10 6 ml -1; their cell volumes measured via image analysis were small (average 0.05 μm -3), often not well countable when erythrosine stain was used. Bacterial biomasses were in the range of 6-21 μg C l -1. Numbers of colony forming units (CFUs) on nutrient fish-agar were c. 3-4 orders lower than DAPI counts. The amounts of heterotrophic protists were low, whereby flagellates reached 6 to 87 ml -1 and ciliates, 0.2-1.2 ml -1 (mostly Oligotrichida). Bacterial production was measured in the same depths as primary production using 3H-thymidine (Thy) and 14C-leucine (Leu) uptake. Consistently, bacterial abundances, biomasses, thymidine and leucine production were higher by 30-50% in layers 2, 10 and 20 m compared with that in the deeper 30 and 40 m, where cellular primary production was negligible. Leucine uptake in the deeper layers was even three times lower than in the upper ones. From the comparison of primary and bacterial production, bacteria roughly use 20-40% of primary production during 24 h in the layers 2 to 20 m.

Streamlined bioreactor-based production of human cartilage tissues.

PubMed

Tonnarelli, B; Santoro, R; Adelaide Asnaghi, M; Wendt, D

2016-05-27

Engineered tissue grafts have been manufactured using methods based predominantly on traditional labour-intensive manual benchtop techniques. These methods impart significant regulatory and economic challenges, hindering the successful translation of engineered tissue products to the clinic. Alternatively, bioreactor-based production systems have the potential to overcome such limitations. In this work, we present an innovative manufacturing approach to engineer cartilage tissue within a single bioreactor system, starting from freshly isolated human primary chondrocytes, through the generation of cartilaginous tissue grafts. The limited number of primary chondrocytes that can be isolated from a small clinically-sized cartilage biopsy could be seeded and extensively expanded directly within a 3D scaffold in our perfusion bioreactor (5.4 ± 0.9 doublings in 2 weeks), bypassing conventional 2D expansion in flasks. Chondrocytes expanded in 3D scaffolds better maintained a chondrogenic phenotype than chondrocytes expanded on plastic flasks (collagen type II mRNA, 18-fold; Sox-9, 11-fold). After this "3D expansion" phase, bioreactor culture conditions were changed to subsequently support chondrogenic differentiation for two weeks. Engineered tissues based on 3D-expanded chondrocytes were more cartilaginous than tissues generated from chondrocytes previously expanded in flasks. We then demonstrated that this streamlined bioreactor-based process could be adapted to effectively generate up-scaled cartilage grafts in a size with clinical relevance (50 mm diameter). Streamlined and robust tissue engineering processes, as the one described here, may be key for the future manufacturing of grafts for clinical applications, as they facilitate the establishment of compact and closed bioreactor-based production systems, with minimal automation requirements, lower operating costs, and increased compliance to regulatory guidelines.

Effects of biotic disturbances on forest carbon cycling in the United States and Canada

USGS Publications Warehouse

Vogelmann, James E.; Allen, Craig D.; Hicke, Jeffrey A.; Desai, Ankur R.; Dietze, Michael C.; Hall, Ronald J.; ,

2012-01-01

Forest insects and pathogens are major disturbance agents that have affected millions of hectares in North America in recent decades, implying significant impacts to the carbon (C) cycle. Here, we review and synthesize published studies of the effects of biotic disturbances on forest C cycling in the United States and Canada. Primary productivity in stands was reduced, sometimes considerably, immediately following insect or pathogen attack. After repeated growth reductions caused by some insects or pathogens or a single infestation by some bark beetle species, tree mortality occurred, altering productivity and decomposition. In the years following disturbance, primary productivity in some cases increased rapidly as a result of enhanced growth by surviving vegetation, and in other cases increased slowly because of lower forest regrowth. In the decades following tree mortality, decomposition increased as a result of the large amount of dead organic matter. Net ecosystem productivity decreased immediately following attack, with some studies reporting a switch to a C source to the atmosphere, and increased afterward as the forest regrew and dead organic matter decomposed. Large variability in C cycle responses arose from several factors, including type of insect or pathogen, time since disturbance, number of trees affected, and capacity of remaining vegetation to increase growth rates following outbreak. We identified significant knowledge gaps, including limited understanding of carbon cycle impacts among different biotic disturbance types (particularly pathogens), their impacts at landscape and regional scales, and limited capacity to predict disturbance events and their consequences for carbon cycling. We conclude that biotic disturbances can have major impacts on forest C stocks and fluxes and can be large enough to affect regional C cycling. However, additional research is needed to reduce the uncertainties associated with quantifying biotic disturbance effects on the North American C budget.

24 CFR 3282.362 - Production Inspection Primary Inspection Agencies (IPIAs).

Code of Federal Regulations, 2010 CFR

2010-04-01

... in production which fails to conform to the design or where the design is not specific, to the... 24 Housing and Urban Development 5 2010-04-01 2010-04-01 false Production Inspection Primary... REGULATIONS Primary Inspection Agencies § 3282.362 Production Inspection Primary Inspection Agencies (IPIAs...

Site-level evaluation of satellite-based global terrestrial gross primary production and net primary production monitoring.

Treesearch

David P. Turner; William D. Ritts; Warren B. Cohen; Thomas K. Maeirsperger; Stith T. Gower; Al A. Kirschbaum; Steve W. Runnings; Maosheng Zhaos; Steven C. Wofsy; Allison L. Dunn; Beverly E. Law; John L. Campbell; Walter C. Oechel; Hyo Jung Kwon; Tilden P. Meyers; Eric E. Small; Shirley A. Kurc; John A. Gamon

2005-01-01

Operational monitoring of global terrestrial gross primary production (GPP) and net primary production (NPP) is now underway using imagery from the satellite-borne Moderate Resolution Imaging Spectroradiometer (MODIS) sensor. Evaluation of MODIS GPP and NPP products will require site-level studies across a range of biomes, with close attention to numerous scaling...

Assessing the impact of nutrient enrichment in estuaries: susceptibility to eutrophication.

PubMed

Painting, S J; Devlin, M J; Malcolm, S J; Parker, E R; Mills, D K; Mills, C; Tett, P; Wither, A; Burt, J; Jones, R; Winpenny, K

2007-01-01

The main aim of this study was to develop a generic tool for assessing risks and impacts of nutrient enrichment in estuaries. A simple model was developed to predict the magnitude of primary production by phytoplankton in different estuaries from nutrient input (total available nitrogen and/or phosphorus) and to determine likely trophic status. In the model, primary production is strongly influenced by water residence times and relative light regimes. The model indicates that estuaries with low and moderate light levels are the least likely to show a biological response to nutrient inputs. Estuaries with a good light regime are likely to be sensitive to nutrient enrichment, and to show similar responses, mediated only by site-specific geomorphological features. Nixon's scale was used to describe the relative trophic status of estuaries, and to set nutrient and chlorophyll thresholds for assessing trophic status. Estuaries identified as being eutrophic may not show any signs of eutrophication. Additional attributes need to be considered to assess negative impacts. Here, likely detriment to the oxygen regime was considered, but is most applicable to areas of restricted exchange. Factors which limit phytoplankton growth under high nutrient conditions (water residence times and/or light availability) may favour the growth of other primary producers, such as macrophytes, which may have a negative impact on other biological communities. The assessment tool was developed for estuaries in England and Wales, based on a simple 3-category typology determined by geomorphology and relative light levels. Nixon's scale needs to be validated for estuaries in England and Wales, once more data are available on light levels and primary production.

Trophic dynamics of deep-sea megabenthos are mediated by surface productivity.

PubMed

Tecchio, Samuele; van Oevelen, Dick; Soetaert, Karline; Navarro, Joan; Ramírez-Llodra, Eva

2013-01-01

Most deep-sea benthic ecosystems are food limited and, in the majority of cases, are driven by the organic matter falling from the surface or advected downslope. Species may adapt to this scarceness by applying a wide variety of responses, such as feeding specialisation, niche width variation, and reduction in metabolic rates. The Mediterranean Sea hosts a gradient of food availability at the deep seafloor over its wide longitudinal transect. In the Mediterranean, broad regional studies on trophic habits are almost absent, and the response of deep-sea benthos to different trophic conditions is still speculative. Here, we show that both primary and secondary production processes taking place at surface layers are key drivers of deep-sea food web structuring. By employing an innovative statistical tool, we interpreted bulk-tissue δ(13)C and δ(15)N isotope ratios in benthic megafauna, and associated surface and mesopelagic components from the 3 basins of the Mediterranean Sea at 3 different depths (1200, 2000, and 3000 m). The trophic niche width and the amplitude of primary carbon sources were positively correlated with both primary and secondary surface production indicators. Moreover, mesopelagic organic matter utilization processes showed an intermediate position between surface and deep benthic components. These results shed light on the understanding of deep-sea ecosystems functioning and, at the same time, they demand further investigation.

Trophic Dynamics of Deep-Sea Megabenthos Are Mediated by Surface Productivity

PubMed Central

Tecchio, Samuele; van Oevelen, Dick; Soetaert, Karline; Navarro, Joan; Ramírez-Llodra, Eva

2013-01-01

Most deep-sea benthic ecosystems are food limited and, in the majority of cases, are driven by the organic matter falling from the surface or advected downslope. Species may adapt to this scarceness by applying a wide variety of responses, such as feeding specialisation, niche width variation, and reduction in metabolic rates. The Mediterranean Sea hosts a gradient of food availability at the deep seafloor over its wide longitudinal transect. In the Mediterranean, broad regional studies on trophic habits are almost absent, and the response of deep-sea benthos to different trophic conditions is still speculative. Here, we show that both primary and secondary production processes taking place at surface layers are key drivers of deep-sea food web structuring. By employing an innovative statistical tool, we interpreted bulk-tissue δ13C and δ15N isotope ratios in benthic megafauna, and associated surface and mesopelagic components from the 3 basins of the Mediterranean Sea at 3 different depths (1200, 2000, and 3000 m). The trophic niche width and the amplitude of primary carbon sources were positively correlated with both primary and secondary surface production indicators. Moreover, mesopelagic organic matter utilization processes showed an intermediate position between surface and deep benthic components. These results shed light on the understanding of deep-sea ecosystems functioning and, at the same time, they demand further investigation. PMID:23691098

Bottom-up linkages between primary production, zooplankton, and fish in a shallow, hypereutrophic lake.

PubMed

Matsuzaki, Shin-Ichiro S; Suzuki, Kenta; Kadoya, Taku; Nakagawa, Megumi; Takamura, Noriko

2018-06-09

Nutrient supply is a key bottom-up control of phytoplankton primary production in lake ecosystems. Top-down control via grazing pressure by zooplankton also constrains primary production, and primary production may simultaneously affect zooplankton. Few studies have addressed these bidirectional interactions. We used convergent cross-mapping (CCM), a numerical test of causal associations, to quantify the presence and direction of the causal relationships among environmental variables (light availability, surface water temperature, NO 3 -N, and PO 4 -P), phytoplankton community composition, primary production, and the abundances of five functional zooplankton groups (large-cladocerans, small-cladocerans, rotifers, calanoids, and cyclopoids) in Lake Kasumigaura, a shallow, hypereutrophic lake in Japan. CCM suggested that primary production was causally influenced by NO 3 -N and phytoplankton community composition; there was no detectable evidence of a causal effect of zooplankton on primary production. Our results also suggest that rotifers and cyclopoids were forced by primary production, and cyclopoids were further influenced by rotifers. However, our CCM suggested that primary production was weakly influenced by rotifers (i.e., bidirectional interaction). These findings may suggest complex linkages between nutrients, primary production, and rotifers and cyclopoids, a pattern that has not been previously detected or has been neglected. We used linear regression analysis to examine the relationships between the zooplankton community and pond smelt (Hypomesus nipponensis), the most abundant planktivore and the most important commercial fish species in Lake Kasumigaura. The relative abundance of pond smelt was significantly and positively correlated with the abundances of rotifers and cyclopoids, which were causally influenced by primary production. This finding suggests that bottom-up linkages between nutrient, primary production, and zooplankton abundance might be a key mechanism supporting high planktivore abundance in eutrophic lakes. Because increases in primary production and cyanobacteria blooms are likely to occur simultaneously in hypereutrophic lakes, our study highlights the need for ecosystem management to resolve the conflict between good water quality and high fishery production. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Sustainable development: a regional perspective.

PubMed

Icamina, P

1988-12-01

This article discusses sustainable development in Asia and current environmental problems in this region. Droughts and rainy seasons pose a major concern indicating environmental limitations: India's 1987 drought halted world grain production and China suffered US $435 million in flooding damage. Deforestation and land degradation are consequences of a rising population's demand for agriculture, fuelwood, irrigation, and hydroelectric projects; 1815 million hectares of forest are cleared/year and 40% of the land could possible be subjected to soil erosion. Although population growth is declining in some Asian countries, the continent inhabits the greatest proportion of world population; 300 million are underfed. Food production remains a problem for this region because of bad weather, highly populated areas, less cropland, soil erosion, and limited water supply. Efforts currently employed to conserve natural resources include community reforestation, providing available drinking water, substituting firewood for fuelwood, and delivering primary health care.

78 FR 28896 - Design Limits and Loading Combinations for Metal Primary Reactor Containment System Components

Federal Register 2010, 2011, 2012, 2013, 2014

2013-05-16

... NUCLEAR REGULATORY COMMISSION [NRC-2013-0095] Design Limits and Loading Combinations for Metal... Regulatory Guide (RG) 1.57, ``Design Limits and Loading Combinations for Metal Primary Reactor Containment... the NRC staff considers acceptable for design limits and loading combinations for metal primary...

Biogenic acidification reduces sea urchin gonad growth and increases susceptibility of aquaculture to ocean acidification.

PubMed

Mos, Benjamin; Byrne, Maria; Dworjanyn, Symon A

2016-02-01

Decreasing oceanic pH (ocean acidification) has emphasised the influence of carbonate chemistry on growth of calcifying marine organisms. However, calcifiers can also change carbonate chemistry of surrounding seawater through respiration and calcification, a potential limitation for aquaculture. This study examined how seawater exchange rate and stocking density of the sea urchin Tripneustes gratilla that were reproductively mature affected carbonate system parameters of their culture water, which in turn influenced growth, gonad production and gonad condition. Growth, relative spine length, gonad production and consumption rates were reduced by up to 67% by increased density (9-43 individuals.m(-2)) and reduced exchange rates (3.0-0.3 exchanges.hr(-1)), but survival and food conversion efficiency were unaffected. Analysis of the influence of seawater parameters indicated that reduced pH and calcite saturation state (ΩCa) were the primary factors limiting gonad production and growth. Uptake of bicarbonate and release of respiratory CO2 by T. gratilla changed the carbonate chemistry of surrounding water. Importantly total alkalinity (AT) was reduced, likely due to calcification by the urchins. Low AT limits the capacity of culture water to buffer against acidification. Direct management to counter biogenic acidification will be required to maintain productivity and reproductive output of marine calcifiers, especially as the ocean carbonate system is altered by climate driven ocean acidification. Copyright © 2015 Elsevier Ltd. All rights reserved.

Primary, new and export production in the NW Pacific subarctic gyre during the vertigo K2 experiments

NASA Astrophysics Data System (ADS)

Elskens, M.; Brion, N.; Buesseler, K.; Van Mooy, B. A. S.; Boyd, P.; Dehairs, F.; Savoye, N.; Baeyens, W.

2008-07-01

This paper presents results on tracer experiments using 13C and 15N to estimate uptake rates of dissolved inorganic carbon (DIC) and nitrogen (DIN). Experiments were carried out at station K2 (47°N, 161°E) in the NW Pacific subarctic gyre during July-August 2005. Our goal was to investigate relationships between new and export production. New production was inferred from the tracer experiments using the f ratio concept (0-50 m); while export production was assessed with neutrally buoyant sediment traps (NBSTs) and the e ratio concept (at 150 m). During trap deployments, K2 was characterized both by changes in primary production (523-404 mg C m -2 d -1), new production (119-67 mg C m -2 d -1), export production (68-24 mg C m -2 d -1) and phytoplankton composition (high to low proportion of diatoms). The data indicate that 17-23% of primary production is exportable to deeper layers ( f ratio) but only 6-13% collected as a sinking particle flux at 150 m ( e ratio). Accordingly, >80% of the carbon fixed by phytoplankton would be mineralized in the upper 50 m (1- f), while <11% would be within 50-150 m ( f- e). DIN uptake flux amounted to 0.5 mM m -2 h -1, which was equivalent to about 95% particulate nitrogen (PN) remineralized and/or grazed within the upper 150 m. Most of the shallow PN remineralization occurred just above the depth of the deep chlorophyll maximum (DCM), where a net ammonium production was measured. Below the DCM, while nitrate uptake rates became negligible because of light limitation, ammonium uptake did continue to be significant. The uptake of ammonium by heterotrophic bacteria was estimated to be 14-17% of the DIN assimilation. Less clear are the consequences of this uptake on the phytoplankton community and biogeochemical processes, e.g. new production. It was suggested that competition for ammonium could select for small cells and may force large diatoms to use nitrate. This implies that under Fe stress as observed here, ammonium uptake is preferred and new production progressively suppressed despite the surplus of nitrate.

Microfluidic Transduction Harnesses Mass Transport Principles to Enhance Gene Transfer Efficiency.

PubMed

Tran, Reginald; Myers, David R; Denning, Gabriela; Shields, Jordan E; Lytle, Allison M; Alrowais, Hommood; Qiu, Yongzhi; Sakurai, Yumiko; Li, William C; Brand, Oliver; Le Doux, Joseph M; Spencer, H Trent; Doering, Christopher B; Lam, Wilbur A

2017-10-04

Ex vivo gene therapy using lentiviral vectors (LVs) is a proven approach to treat and potentially cure many hematologic disorders and malignancies but remains stymied by cumbersome, cost-prohibitive, and scale-limited production processes that cannot meet the demands of current clinical protocols for widespread clinical utilization. However, limitations in LV manufacture coupled with inefficient transduction protocols requiring significant excess amounts of vector currently limit widespread implementation. Herein, we describe a microfluidic, mass transport-based approach that overcomes the diffusion limitations of current transduction platforms to enhance LV gene transfer kinetics and efficiency. This novel ex vivo LV transduction platform is flexible in design, easy to use, scalable, and compatible with standard cell transduction reagents and LV preparations. Using hematopoietic cell lines, primary human T cells, primary hematopoietic stem and progenitor cells (HSPCs) of both murine (Sca-1 + ) and human (CD34 + ) origin, microfluidic transduction using clinically processed LVs occurs up to 5-fold faster and requires as little as one-twentieth of LV. As an in vivo validation of the microfluidic-based transduction technology, HSPC gene therapy was performed in hemophilia A mice using limiting amounts of LV. Compared to the standard static well-based transduction protocols, only animals transplanted with microfluidic-transduced cells displayed clotting levels restored to normal. Copyright © 2017 The Author(s). Published by Elsevier Inc. All rights reserved.

Systematic reviews addressing identified health policy priorities in Eastern Mediterranean countries: a situational analysis.

PubMed

El-Jardali, Fadi; Akl, Elie A; Karroum, Lama Bou; Kdouh, Ola; Akik, Chaza; Fadlallah, Racha; Hammoud, Rawan

2014-08-20

Systematic reviews can offer policymakers and stakeholders concise, transparent, and relevant evidence pertaining to pressing policy priorities to help inform the decision-making process. The production and the use of systematic reviews are specifically limited in the Eastern Mediterranean region. The extent to which published systematic reviews address policy priorities in the region is still unknown. This situational analysis exercise aims at assessing the extent to which published systematic reviews address policy priorities identified by policymakers and stakeholders in Eastern Mediterranean region countries. It also provides an overview about the state of systematic review production in the region and identifies knowledge gaps. We conducted a systematic search of the Health System Evidence database to identify published systematic reviews on policy-relevant priorities pertaining to the following themes: human resources for health, health financing, the role of the non-state sector, and access to medicine. Priorities were identified from two priority-setting exercises conducted in the region. We described the distribution of these systematic reviews across themes, sub-themes, authors' affiliations, and countries where included primary studies were conducted. Out of the 1,045 systematic reviews identified in Health System Evidence on selected themes, a total of 200 systematic reviews (19.1%) addressed the priorities from the Eastern Mediterranean region. The theme with the largest number of systematic reviews included was human resources for health (115) followed by health financing (33), access to medicine (27), and role of the non-state sector (25). Authors based in the region produced only three systematic reviews addressing regional priorities (1.5%). Furthermore, no systematic review focused on the Eastern Mediterranean region. Primary studies from the region had limited contribution to systematic reviews; 17 systematic reviews (8.5%) included primary studies conducted in the region. There are still gaps in the production of systematic reviews addressing policymakers' and stakeholders' priorities in the Eastern Mediterranean region. Efforts should be directed towards better aligning systematic review production with policy needs and priorities. Study findings can inform the agendas of researchers, research institutions, and international funding agencies of priority areas where systematic reviews are required.

Assimilating bio-optical glider data during a phytoplankton bloom in the southern Ross Sea

NASA Astrophysics Data System (ADS)

Kaufman, Daniel E.; Friedrichs, Marjorie A. M.; Hemmings, John C. P.; Smith, Walker O., Jr.

2018-01-01

The Ross Sea is a region characterized by high primary productivity in comparison to other Antarctic coastal regions, and its productivity is marked by considerable variability both spatially (1-50 km) and temporally (days to weeks). This variability presents a challenge for inferring phytoplankton dynamics from observations that are limited in time or space, which is often the case due to logistical limitations of sampling. To better understand the spatiotemporal variability in Ross Sea phytoplankton dynamics and to determine how restricted sampling may skew dynamical interpretations, high-resolution bio-optical glider measurements were assimilated into a one-dimensional biogeochemical model adapted for the Ross Sea. The assimilation of data from the entire glider track using the micro-genetic and local search algorithms in the Marine Model Optimization Testbed improves the model-data fit by ˜ 50 %, generating rates of integrated primary production of 104 g C m-2 yr-1 and export at 200 m of 27 g C m-2 yr-1. Assimilating glider data from three different latitudinal bands and three different longitudinal bands results in minimal changes to the simulations, improves the model-data fit with respect to unassimilated data by ˜ 35 %, and confirms that analyzing these glider observations as a time series via a one-dimensional model is reasonable on these scales. Whereas assimilating the full glider data set produces well-constrained simulations, assimilating subsampled glider data at a frequency consistent with cruise-based sampling results in a wide range of primary production and export estimates. These estimates depend strongly on the timing of the assimilated observations, due to the presence of high mesoscale variability in this region. Assimilating surface glider data subsampled at a frequency consistent with available satellite-derived data results in 40 % lower carbon export, primarily resulting from optimized rates generating more slowly sinking diatoms. This analysis highlights the need for the strategic consideration of the impacts of data frequency, duration, and coverage when combining observations with biogeochemical modeling in regions with strong mesoscale variability.

Systematic reviews addressing identified health policy priorities in Eastern Mediterranean countries: a situational analysis

PubMed Central

2014-01-01

Background Systematic reviews can offer policymakers and stakeholders concise, transparent, and relevant evidence pertaining to pressing policy priorities to help inform the decision-making process. The production and the use of systematic reviews are specifically limited in the Eastern Mediterranean region. The extent to which published systematic reviews address policy priorities in the region is still unknown. This situational analysis exercise aims at assessing the extent to which published systematic reviews address policy priorities identified by policymakers and stakeholders in Eastern Mediterranean region countries. It also provides an overview about the state of systematic review production in the region and identifies knowledge gaps. Methods We conducted a systematic search of the Health System Evidence database to identify published systematic reviews on policy-relevant priorities pertaining to the following themes: human resources for health, health financing, the role of the non-state sector, and access to medicine. Priorities were identified from two priority-setting exercises conducted in the region. We described the distribution of these systematic reviews across themes, sub-themes, authors’ affiliations, and countries where included primary studies were conducted. Results Out of the 1,045 systematic reviews identified in Health System Evidence on selected themes, a total of 200 systematic reviews (19.1%) addressed the priorities from the Eastern Mediterranean region. The theme with the largest number of systematic reviews included was human resources for health (115) followed by health financing (33), access to medicine (27), and role of the non-state sector (25). Authors based in the region produced only three systematic reviews addressing regional priorities (1.5%). Furthermore, no systematic review focused on the Eastern Mediterranean region. Primary studies from the region had limited contribution to systematic reviews; 17 systematic reviews (8.5%) included primary studies conducted in the region. Conclusions There are still gaps in the production of systematic reviews addressing policymakers’ and stakeholders’ priorities in the Eastern Mediterranean region. Efforts should be directed towards better aligning systematic review production with policy needs and priorities. Study findings can inform the agendas of researchers, research institutions, and international funding agencies of priority areas where systematic reviews are required. PMID:25139256

Chemical perturbation of secondary metabolism demonstrates important links to primary metabolism.

PubMed

Craney, Arryn; Ozimok, Cory; Pimentel-Elardo, Sheila Marie; Capretta, Alfredo; Nodwell, Justin R

2012-08-24

Bacterially produced secondary metabolites are used as antibiotics, anticancer drugs, and for many other medicinal applications. The mechanisms that limit the production of these molecules in the laboratory are not well understood, and this has impeded the discovery of many important compounds. We have identified small molecules that remodel the yields of secondary metabolites in many actinomycetes and show that one set of these molecules does so by inhibiting fatty acid biosynthesis. This demonstrates a particularly intimate relationship between this primary metabolic pathway and secondary metabolism and suggests an approach to enhance the yields of metabolites for discovery and biochemical characterization. Copyright © 2012 Elsevier Ltd. All rights reserved.

Secondary organic aerosol production from diesel vehicle exhaust: impact of aftertreatment, fuel chemistry and driving cycle

NASA Astrophysics Data System (ADS)

Gordon, T. D.; Presto, A. A.; Nguyen, N. T.; Robertson, W. H.; Na, K.; Sahay, K. N.; Zhang, M.; Maddox, C.; Rieger, P.; Chattopadhyay, S.; Maldonado, H.; Maricq, M. M.; Robinson, A. L.

2014-05-01

Environmental chamber ("smog chamber") experiments were conducted to investigate secondary organic aerosol (SOA) production from dilute emissions from two medium-duty diesel vehicles (MDDVs) and three heavy-duty diesel vehicles (HDDVs) under urban-like conditions. Some of the vehicles were equipped with emission control aftertreatment devices, including diesel particulate filters (DPFs), selective catalytic reduction (SCR) and diesel oxidation catalysts (DOCs). Experiments were also performed with different fuels (100% biodiesel and low-, medium- or high-aromatic ultralow sulfur diesel) and driving cycles (Unified Cycle,~Urban Dynamometer Driving Schedule, and creep + idle). During normal operation, vehicles with a catalyzed DPF emitted very little primary particulate matter (PM). Furthermore, photooxidation of dilute emissions from these vehicles produced essentially no SOA (below detection limit). However, significant primary PM emissions and SOA production were measured during active DPF regeneration experiments. Nevertheless, under reasonable assumptions about DPF regeneration frequency, the contribution of regeneration emissions to the total vehicle emissions is negligible, reducing PM trapping efficiency by less than 2%. Therefore, catalyzed DPFs appear to be very effective in reducing both primary PM emissions and SOA production from diesel vehicles. For both MDDVs and HDDVs without aftertreatment substantial SOA formed in the smog chamber - with the emissions from some vehicles generating twice as much SOA as primary organic aerosol after 3 h of oxidation at typical urban VOC / NOx ratios (3 : 1). Comprehensive organic gas speciation was performed on these emissions, but less than half of the measured SOA could be explained by traditional (speciated) SOA precursors. The remainder presumably originates from the large fraction (~30%) of the nonmethane organic gas emissions that could not be speciated using traditional one-dimensional gas chromatography. The unspeciated organics - likely comprising less volatile species such as intermediate volatility organic compounds - appear to be important SOA precursors; we estimate that the effective SOA yield (defined as the ratio of SOA mass to reacted precursor mass) was 9 ± 6% if both speciated SOA precursors and unspeciated organics are included in the analysis. SOA production from creep + idle operation was 3-4 times larger than SOA production from the same vehicle operated over the Urban Dynamometer Driving Schedule (UDDS). Fuel properties had little or no effect on primary PM emissions or SOA formation.

9 CFR 113.51 - Requirements for primary cells used for production of biologics.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Requirements for primary cells used... VECTORS STANDARD REQUIREMENTS Ingredient Requirements § 113.51 Requirements for primary cells used for production of biologics. Primary cells used to prepare biological products shall be derived from normal...

9 CFR 113.51 - Requirements for primary cells used for production of biologics.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 9 Animals and Animal Products 1 2012-01-01 2012-01-01 false Requirements for primary cells used... VECTORS STANDARD REQUIREMENTS Ingredient Requirements § 113.51 Requirements for primary cells used for production of biologics. Primary cells used to prepare biological products shall be derived from normal...

9 CFR 113.51 - Requirements for primary cells used for production of biologics.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 9 Animals and Animal Products 1 2011-01-01 2011-01-01 false Requirements for primary cells used... VECTORS STANDARD REQUIREMENTS Ingredient Requirements § 113.51 Requirements for primary cells used for production of biologics. Primary cells used to prepare biological products shall be derived from normal...

9 CFR 113.51 - Requirements for primary cells used for production of biologics.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 9 Animals and Animal Products 1 2014-01-01 2014-01-01 false Requirements for primary cells used... VECTORS STANDARD REQUIREMENTS Ingredient Requirements § 113.51 Requirements for primary cells used for production of biologics. Primary cells used to prepare biological products shall be derived from normal...

9 CFR 113.51 - Requirements for primary cells used for production of biologics.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 9 Animals and Animal Products 1 2013-01-01 2013-01-01 false Requirements for primary cells used... VECTORS STANDARD REQUIREMENTS Ingredient Requirements § 113.51 Requirements for primary cells used for production of biologics. Primary cells used to prepare biological products shall be derived from normal...

Bedrock composition limits mountain ecosystem productivity and landscape evolution (Invited)

NASA Astrophysics Data System (ADS)

Riebe, C. S.; Hahm, W.; Lukens, C.

2013-12-01

We used measurements of bedrock geochemistry, forest productivity and cosmogenic nuclides to explore connections among lithology, ecosystem productivity and landscape evolution across a lithosequence of 21 sites in the Sierra Nevada Batholith, California. Our sites span a narrow range in elevations and thus share similar climatic conditions. Meanwhile, underlying bedrock varies from granite to diorite and spans nearly the entire range of geochemical compositions observed in Cordilleran granitoids. Land cover varies markedly, from groves of Giant Sequoia, the largest trees on Earth, to pluton-spanning swaths of little or no soil and vegetative cover. This is closely reflected in measures of forest productivity, such as remotely sensed tree-canopy cover, which varies by more than an order of magnitude across our sites and often changes abruptly at mapped contacts between rock types. We find that tree-canopy cover is closely correlated with the concentrations in bedrock of major and minor elements, including several plant-essential nutrients. For example, tree-canopy cover is virtually zero where there is less than 0.3 mg/g phosphorus in bedrock. Erosion rates from these nearly vegetation-free, nutrient deserts are more than 2.5 times slower on average than they are from surrounding, relatively nutrient-rich, soil-mantled bedrock. Thus by influencing soil and forest cover, bedrock nutrient concentrations may provoke weathering-limited erosion and thus may strongly regulate landscape evolution. Our analysis suggests that variations in bedrock nutrient concentrations can also provoke an intrinsic limitation on primary productivity. These limitations appear to apply across all our sites. To the extent that they are broadly representative of conditions in granitic landscapes elsewhere around the world, our results are consistent with widespread, but previously undocumented lithologic control of the distribution and diversity of vegetation in mountainous terrain.

Effects of long-term nutrient additions on Arctic tundra, stream, and lake ecosystems: beyond NPP.

PubMed

Gough, Laura; Bettez, Neil D; Slavik, Karie A; Bowden, William B; Giblin, Anne E; Kling, George W; Laundre, James A; Shaver, Gaius R

2016-11-01

Primary producers form the base of food webs but also affect other ecosystem characteristics, such as habitat structure, light availability, and microclimate. Here, we examine changes caused by 5-30+ years of nutrient addition and resulting increases in net primary productivity (NPP) in tundra, streams, and lakes in northern Alaska. The Arctic provides an important opportunity to examine how ecosystems characterized by low diversity and low productivity respond to release from nutrient limitation. We review how responses of algae and plants affect light availability, perennial biotic structures available for consumers, oxygen levels, and temperature. Sometimes, responses were similar across all three ecosystems; e.g., increased NPP significantly reduced light to the substrate following fertilization. Perennial biotic structures increased in tundra and streams but not in lakes, and provided important new habitat niches for consumers as well as other producers. Oxygen and temperature responses also differed. Life history traits (e.g., longevity) of the primary producers along with the fate of detritus drove the responses and recovery. As global change persists and nutrients become more available in the Arctic and elsewhere, incorporating these factors as response variables will enable better prediction of ecosystem changes and feedbacks in this biome and others.

Resonant Soft X-ray Scattering of Cellulose Microstructure in Plant Primary Cell Walls

NASA Astrophysics Data System (ADS)

Ye, Dan; Kiemle, Sarah N.; Wang, Cheng; Cosgrove, Daniel J.; Gomez, Esther W.; Gomez, Enrique D.

Cellulosic biomass is the most abundant raw material available for the production of renewable and sustainable biofuels. Breaking down cellulose is the rate-limiting step in economical biofuel production; therefore, a detailed understanding of the microscopic structure of plant cell walls is required to develop efficient biofuel conversion methods. Primary cell walls are key determinants of plant growth and mechanics. Their structure is complex and heterogeneous, making it difficult to elucidate how various components such as pectin, hemicellulose, and cellulose contribute to the overall structure. The electron density of these wall components is similar; such that conventional hard X-ray scattering does not generate enough contrast to resolve the different elements of the polysaccharide network. The chemical specificity of resonant soft X-ray scattering allows contrast to be generated based on differences in chemistry of the different polysaccharides. By varying incident X-ray energies, we have achieved increased scattering contrast between cellulose and other polysaccharides from primary cell walls of onions. By performing scattering at certain energies, features of the network structure of the cell wall are resolved. From the soft X-ray scattering results, we obtained the packing distance of cellulose microfibrils embedded in the polysaccharide network.

Production and export in a global ocean ecosystem model

NASA Astrophysics Data System (ADS)

Palmer, J. R.; Totterdell, I. J.

2001-05-01

The Hadley Centre Ocean Carbon Cycle (HadOCC) model is a coupled physical-biogeochemical model of the ocean carbon cycle. It features an explicit representation of the marine ecosystem, which is assumed to be limited by nitrogen availability. The biogeochemical compartments are dissolved nutrient, total CO 2, total alkalinity, phytoplankton, zooplankton and detritus. The results of the standard simulation are presented. The annual primary production predicted by the model ( 47.7 Gt C yr -1) compares well to the estimates made by Longhurst et al. (1995, J. Plankton Res., 17, 1245) and Antoine et al. (1996, Global Biogeochem. Cycles, 10, 57). The HadOCC model finds high production in the sub-polar North Pacific and North Atlantic Oceans, and around the Antarctic convergence, and low production in the sub-tropical gyres. However in disagreement with the observations of Longhurst et al. and Antoine et al., the model predicts very high production in the eastern equatorial Pacific Ocean. The export flux of carbon in the model agrees well with data from deep-water sediment traps. In order to examine the factors controlling production in the ocean, additional simulations have been run. A nutrient-restoring simulation confirms that the areas with the highest primary production are those with the greatest nutrient supply. A reduced wind-stress experiment demonstrates that the high production found in the equatorial Pacific is driven by excessive upwelling of nutrient-rich water. Three further simulations show that nutrient supply at high latitudes, and hence production there, is sensitive to the parameters and climatological forcings of the mixed layer sub-model.

Development of a human adaptive immune system in cord blood cell-transplanted mice.

PubMed

Traggiai, Elisabetta; Chicha, Laurie; Mazzucchelli, Luca; Bronz, Lucio; Piffaretti, Jean-Claude; Lanzavecchia, Antonio; Manz, Markus G

2004-04-02

Because ethical restrictions limit in vivo studies of the human hemato-lymphoid system, substitute human to small animal xenotransplantation models have been employed. Existing models, however, sustain only limited development and maintenance of human lymphoid cells and rarely produce immune responses. Here we show that intrahepatic injection of CD34+ human cord blood cells into conditioned newborn Rag2-/-gammac-/- mice leads to de novo development of B, T, and dendritic cells; formation of structured primary and secondary lymphoid organs; and production of functional immune responses. This provides a valuable model to study development and function of the human adaptive immune system in vivo.

A representation of the phosphorus cycle for ORCHIDEE (revision 4520)

NASA Astrophysics Data System (ADS)

Goll, Daniel S.; Vuichard, Nicolas; Maignan, Fabienne; Jornet-Puig, Albert; Sardans, Jordi; Violette, Aurelie; Peng, Shushi; Sun, Yan; Kvakic, Marko; Guimberteau, Matthieu; Guenet, Bertrand; Zaehle, Soenke; Penuelas, Josep; Janssens, Ivan; Ciais, Philippe

2017-10-01

Land surface models rarely incorporate the terrestrial phosphorus cycle and its interactions with the carbon cycle, despite the extensive scientific debate about the importance of nitrogen and phosphorus supply for future land carbon uptake. We describe a representation of the terrestrial phosphorus cycle for the ORCHIDEE land surface model, and evaluate it with data from nutrient manipulation experiments along a soil formation chronosequence in Hawaii. ORCHIDEE accounts for the influence of the nutritional state of vegetation on tissue nutrient concentrations, photosynthesis, plant growth, biomass allocation, biochemical (phosphatase-mediated) mineralization, and biological nitrogen fixation. Changes in the nutrient content (quality) of litter affect the carbon use efficiency of decomposition and in return the nutrient availability to vegetation. The model explicitly accounts for root zone depletion of phosphorus as a function of root phosphorus uptake and phosphorus transport from the soil to the root surface. The model captures the observed differences in the foliage stoichiometry of vegetation between an early (300-year) and a late (4.1 Myr) stage of soil development. The contrasting sensitivities of net primary productivity to the addition of either nitrogen, phosphorus, or both among sites are in general reproduced by the model. As observed, the model simulates a preferential stimulation of leaf level productivity when nitrogen stress is alleviated, while leaf level productivity and leaf area index are stimulated equally when phosphorus stress is alleviated. The nutrient use efficiencies in the model are lower than observed primarily due to biases in the nutrient content and turnover of woody biomass. We conclude that ORCHIDEE is able to reproduce the shift from nitrogen to phosphorus limited net primary productivity along the soil development chronosequence, as well as the contrasting responses of net primary productivity to nutrient addition.

Primary and Secondary Yield Losses Caused by Pests and Diseases: Assessment and Modeling in Coffee

PubMed Central

Gary, Christian; Tixier, Philippe; Lechevallier, Esther

2017-01-01

The assessment of crop yield losses is needed for the improvement of production systems that contribute to the incomes of rural families and food security worldwide. However, efforts to quantify yield losses and identify their causes are still limited, especially for perennial crops. Our objectives were to quantify primary yield losses (incurred in the current year of production) and secondary yield losses (resulting from negative impacts of the previous year) of coffee due to pests and diseases, and to identify the most important predictors of coffee yields and yield losses. We established an experimental coffee parcel with full-sun exposure that consisted of six treatments, which were defined as different sequences of pesticide applications. The trial lasted three years (2013–2015) and yield components, dead productive branches, and foliar pests and diseases were assessed as predictors of yield. First, we calculated yield losses by comparing actual yields of specific treatments with the estimated attainable yield obtained in plots which always had chemical protection. Second, we used structural equation modeling to identify the most important predictors. Results showed that pests and diseases led to high primary yield losses (26%) and even higher secondary yield losses (38%). We identified the fruiting nodes and the dead productive branches as the most important and useful predictors of yields and yield losses. These predictors could be added in existing mechanistic models of coffee, or can be used to develop new linear mixed models to estimate yield losses. Estimated yield losses can then be related to production factors to identify corrective actions that farmers can implement to reduce losses. The experimental and modeling approaches of this study could also be applied in other perennial crops to assess yield losses. PMID:28046054

Primary and Secondary Yield Losses Caused by Pests and Diseases: Assessment and Modeling in Coffee.

PubMed

Cerda, Rolando; Avelino, Jacques; Gary, Christian; Tixier, Philippe; Lechevallier, Esther; Allinne, Clémentine

2017-01-01

The assessment of crop yield losses is needed for the improvement of production systems that contribute to the incomes of rural families and food security worldwide. However, efforts to quantify yield losses and identify their causes are still limited, especially for perennial crops. Our objectives were to quantify primary yield losses (incurred in the current year of production) and secondary yield losses (resulting from negative impacts of the previous year) of coffee due to pests and diseases, and to identify the most important predictors of coffee yields and yield losses. We established an experimental coffee parcel with full-sun exposure that consisted of six treatments, which were defined as different sequences of pesticide applications. The trial lasted three years (2013-2015) and yield components, dead productive branches, and foliar pests and diseases were assessed as predictors of yield. First, we calculated yield losses by comparing actual yields of specific treatments with the estimated attainable yield obtained in plots which always had chemical protection. Second, we used structural equation modeling to identify the most important predictors. Results showed that pests and diseases led to high primary yield losses (26%) and even higher secondary yield losses (38%). We identified the fruiting nodes and the dead productive branches as the most important and useful predictors of yields and yield losses. These predictors could be added in existing mechanistic models of coffee, or can be used to develop new linear mixed models to estimate yield losses. Estimated yield losses can then be related to production factors to identify corrective actions that farmers can implement to reduce losses. The experimental and modeling approaches of this study could also be applied in other perennial crops to assess yield losses.

Monsoon-induced changes in the size-fractionated phytoplankton biomass and production rate in the estuarine and coastal waters of southwest coast of India.

PubMed

Madhu, N V; Jyothibabu, R; Balachandran, K K

2010-07-01

Changes in the autotrophic pico- (0.2-2 microm), nano- (2-20 microm), and microplankton (>20 microm) biomass (chlorophyll a) and primary production were measured in the estuarine and coastal waters off Cochin, southwest coast of India during the onset and establishment of a monsoon. During this period, the estuary was dominated by nutrient-rich freshwater, whereas the coastal waters were characterized with higher salinity values (>30 psu) and less nutrients. The average surface chlorophyll a concentrations and primary production rates were higher in the estuary (average 13.7 mg m(-3) and 432 mgC m(-3) day(-1)) as compared to the coastal waters (5.3 mg m(-3) and 224 mgC m(-3) day(-1)). The nanoplankton community formed the major fraction of chlorophyll a and primary production, both in the estuary (average 85 +/- SD 8.3% and 81.2 +/- SD 3.2%) and the coastal waters (average 73.2 +/- SD 17.2% and 81.9 +/- 15.7%). Nanoplankton had the maximum photosynthetic efficiency in the coastal waters (average 4.8 +/- SD 3.9 mgC mgChl a m(-3) h(-1)), whereas in the estuary, the microplankton had higher photosynthetic efficiency (average 7.4 +/- 7 mgC mgChl a m(-3) h(-1)). The heavy cloud cover and increased water column turbidity not only limit the growth of large-sized phytoplankton in the Cochin estuary and coastal waters but also support the proliferation of nanoplankton community during the monsoon season, even though large variation in nanoplankton chlorophyll a and production exists between these two areas.

Culture medium pH influence on Gluconacetobacter physiology: Cellulose production rate and yield enhancement in presence of multiple carbon sources.

PubMed

Yassine, Fatima; Bassil, Nathalie; Flouty, Roula; Chokr, Ali; Samrani, Antoine El; Boiteux, Gisèle; Tahchi, Mario El

2016-08-01

Gluconacetobacter genera are valued for bacterial cellulose (BC) and acetic acid production. BC is produced at optimal yields in classical microbiological media that are expensive for a large scale of production. In addition, BC usage for industrial purposes is limited due to low conversion rate into cellulose and to long incubation duration. In this paper, Gluconacetobacter isolated from apple vinegar was kinetically studied to evaluate cellulose production in presence of different carbon sources. Acetic and citric acid effect on Gluconacetobacter metabolism is clarified. It was shown that Gluconacetobacter uses glucose as a primary carbon source for cells growth and products formation. Acetic acid employment as a co-carbon source in Hestrin Schramm medium showed an increase of 17% in BC yield with a moderate decrease in the crystallite size of the resulting polymer. Copyright © 2016 Elsevier Ltd. All rights reserved.

Model of a coral reef ecosystem

NASA Astrophysics Data System (ADS)

Atkinson, Marlin J.; Grigg, Richard W.

1984-08-01

The ECOPATH model for French Frigate Shoals estimates the benthic plant production (net primary production in kg wet weight) required to support the atoll food chain. In this section we estimate the benthic net primary production and net community production of the atoll based on metabolism studies of reef flat, knolls, and lagoon communities at French Frigate Shoals Hawaii. Community metabolism was measured during winter and summer. The reef communities at French Frigate Shoals exhibited patterns and rates of organic carbon production and calcification similar to other reefs in the world. The estimate of net primary production is 6.1·106 kg wet weight km-2 year-1±50%, a value remarkably close to the estimate by the ECOPATH model of 4.3·106 kg wet weight km-2 year-1. Our estimate of net community production or the amount of carbon not consumed by the benthos was high; approximately 15% of the net primary production. Model results indicate that about 5% of net primary production is passed up the food chain to mobile predators. This suggests about 10% of net primary production (˜6% of gross primary production) may be permanently lost to the system via sediment burial or export offshore.

Regional impacts of iron-light colimitation in a global biogeochemical model

NASA Astrophysics Data System (ADS)

Galbraith, E. D.; Gnanadesikan, A.; Dunne, J. P.; Hiscock, M. R.

2010-03-01

Laboratory and field studies have revealed that iron has multiple roles in phytoplankton physiology, with particular importance for light-harvesting cellular machinery. However, although iron-limitation is explicitly included in numerous biogeochemical/ecosystem models, its implementation varies, and its effect on the efficiency of light harvesting is often ignored. Given the complexity of the ocean environment, it is difficult to predict the consequences of applying different iron limitation schemes. Here we explore the interaction of iron and nutrient cycles in an ocean general circulation model using a new, streamlined model of ocean biogeochemistry. Building on previously published parameterizations of photoadaptation and export production, the Biogeochemistry with Light Iron Nutrients and Gasses (BLING) model is constructed with only four explicit tracers but including macronutrient and micronutrient limitation, light limitation, and an implicit treatment of community structure. The structural simplicity of this computationally-inexpensive model allows us to clearly isolate the global effect that iron availability has on maximum light-saturated photosynthesis rates vs. the effect iron has on photosynthetic efficiency. We find that the effect on light-saturated photosynthesis rates is dominant, negating the importance of photosynthetic efficiency in most regions, especially the cold waters of the Southern Ocean. The primary exceptions to this occur in iron-rich regions of the Northern Hemisphere, where high light-saturated photosynthesis rates allow photosynthetic efficiency to play a more important role. In other words, the ability to efficiently harvest photons has little effect in regions where light-saturated growth rates are low. Additionally, we speculate that the phytoplankton cells dominating iron-limited regions tend to have relatively high photosynthetic efficiency, due to reduced packaging effects. If this speculation is correct, it would imply that natural communities of iron-stressed phytoplankton may tend to harvest photons more efficiently than would be inferred from iron-limitation experiments with other phytoplankton. We suggest that iron limitation of photosynthetic efficiency has a relatively small impact on global biogeochemistry, though it is expected to impact the seasonal cycle of plankton as well as the vertical structure of primary production.

Monitoring Biogeochemical Processes in Coral Reef Environments with Remote Sensing: A Cross-Disciplinary Approach.

NASA Astrophysics Data System (ADS)

Perez, D.; Phinn, S. R.; Roelfsema, C. M.; Shaw, E. C.; Johnston, L.; Iguel, J.; Camacho, R.

2017-12-01

Primary production and calcification are important to measure and monitor over time, because of their fundamental roles in the carbon cycling and accretion of habitat structure for reef ecosystems. However, monitoring biogeochemical processes in coastal environments has been difficult due to complications in resolving differences in water optical properties from biological productivity and other sources (sediment, dissolved organics, etc.). This complicates application of algorithms developed for satellite image data from open ocean conditions, and requires alternative approaches. This project applied a cross-disciplinary approach, using established methods for monitoring productivity in terrestrial environments to coral reef systems. Availability of regularly acquired high spatial (< 5m pixels), multispectral satellite imagery has improved mapping and monitoring capabilities for shallow, marine environments such as seagrass and coral reefs. There is potential to further develop optical models for remote sensing applications to estimate and monitor reef system processes, such as primary productivity and calcification. This project collected field measurements of spectral absorptance and primary productivity and calcification rates for two reef systems: Heron Reef, southern Great Barrier Reef and Saipan Lagoon, Commonwealth of the Northern Mariana Islands. Field data were used to parameterize a light-use efficiency (LUE) model, estimating productivity from absorbed photosynthetically active radiation. The LUE model has been successfully applied in terrestrial environments for the past 40 years, and could potentially be used in shallow, marine environments. The model was used in combination with a map of benthic community composition produced from objective based image analysis of WorldView 2 imagery. Light-use efficiency was measured for functional groups: coral, algae, seagrass, and sediment. However, LUE was overestimated for sediment, which led to overestimation of productivity for the mapped area. This was due to differences in spatial and temporal resolution of field data used in the model. The limitations and application of the LUE model to coral reef environments will be presented.

Disentangling trophic relationships in a High Arctic tundra ecosystem through food web modeling.

PubMed

Legagneux, P; Gauthier, G; Berteaux, D; Bêty, J; Cadieux, M C; Bilodeau, F; Bolduc, E; McKinnon, L; Tarroux, A; Therrien, J F; Morissette, L; Krebs, C J

2012-07-01

Determining the manner in which food webs will respond to environmental changes is difficult because the relative importance of top-down vs. bottom-up forces in controlling ecosystems is still debated. This is especially true in the Arctic tundra where, despite relatively simple food webs, it is still unclear which forces dominate in this ecosystem. Our primary goal was to assess the extent to which a tundra food web was dominated by plant-herbivore or predator-prey interactions. Based on a 17-year (1993-2009) study of terrestrial wildlife on Bylot Island, Nunavut, Canada, we developed trophic mass balance models to address this question. Snow Geese were the dominant herbivores in this ecosystem, followed by two sympatric lemming species (brown and collared lemmings). Arctic foxes, weasels, and several species of birds of prey were the dominant predators. Results of our trophic models encompassing 19 functional groups showed that <10% of the annual primary production was consumed by herbivores in most years despite the presence of a large Snow Goose colony, but that 20-100% of the annual herbivore production was consumed by predators. The impact of herbivores on vegetation has also weakened over time, probably due to an increase in primary production. The impact of predators was highest on lemmings, intermediate on passerines, and lowest on geese and shorebirds, but it varied with lemming abundance. Predation of collared lemmings exceeded production in most years and may explain why this species remained at low density. In contrast, the predation rate on brown lemmings varied with prey density and may have contributed to the high-amplitude, periodic fluctuations in the abundance of this species. Our analysis provided little evidence that herbivores are limited by primary production on Bylot Island. In contrast, we measured strong predator-prey interactions, which supports the hypothesis that this food web is primarily controlled by top-down forces. The presence of allochthonous resources subsidizing top predators and the absence of large herbivores may partly explain the predominant role of predation in this low-productivity ecosystem.

The annual cycle of primary productivity in a tropical estuary: the inner regions of the Golfo de Nicoya, Costa Rica.

PubMed

Gocke, K; Cortés, J; Murillo, M M

2001-12-01

A one year cycle of primary productivity (PP) was studied using the "light and dark bottle" technique in the Golfo de Nicoya, located at 10 degrees N and 85 degrees W at the Pacific coast of Costa Rica. Samples were always incubated at 0, 1, 2, 3 and 4 m depth for 5 hrs from 8:30 till 13:30. The measurements were performed twice per month, first around high tide and one week later at low tide to account for tidal influences. This routine study was supplemented by special measurements about regional and short-term variations of primary productivity using the 14C-method, which mainly served to account for the shortcomings of the routinely employed incubation technique. The upper Golfo de Nicoya is an extremely productive, phytoplankton dominated estuarine system with an annual gross PP of 1037, a net PP of 610 and a community respiration of 427 g C m(-2) a(-1). Highest monthly PP values occurred during the dry season and at the beginning of the rainy season. Peaks in primary productivity coincided with massive blooms of red tide forming algae. Internal biological dynamics, estuarine circulation and land run-off are the most important nutrient sources. High water turbidity reduces the euphotic layer to 4-5 m depth, making the underwater light regime the rate limiting factor. On an annual basis, 41% of the organic carbon produced in the system is already consumed in the euphotic layer. Considering the entire water column (mean depth at mean tidal water level is around 7.7 m) 79% is consumed in the pelagial. Taking into account the organic material consumed and stored in the sediments the carbon budget of the upper gulf is probably balanced. Since, however, the system receives a considerable amount of organic material from its terrestrial surroundings (especially from the mangrove forests), a surplus of organic carbon is exported from the upper Golfo de Nicoya, which enhances the overall water productivity of the lower gulf and the adjacent area.

Use of topical hemostatic agents in gynecologic surgery.

PubMed

Wysham, Weiya Z; Roque, Dario R; Soper, John T

2014-09-01

Sutures, hemoclips, and electrocautery are the primary mechanisms used to achieve hemostasis during gynecologic surgery, but in situations in which these are inadequate or not feasible, an array of hemostatic agents are available to help achieve hemostasis. These agents include physical agents such as cellulose, collagen, or gelatin products as well as biologic agents such as thrombin and fibrin products. Limited data are available on many of these agents, although their use is increasing, sometimes at high costs. In gynecologic surgery, hemostatic agents are likely most effective when used in areas of oozing or slow bleeding and as an adjunct to conventional surgical methods of hemostasis.

A sensitive and rapid assay for 4-aminophenol in paracetamol drug and tablet formulation, by flow injection analysis with spectrophotometric detection.

PubMed

Bloomfield, M S

2002-12-06

4-Aminophenol (4AP) is the primary degradation product of paracetamol which is limited at a low level (50 ppm or 0.005% w/w) in the drug substance by the European, United States, British and German Pharmacopoeias, employing a manual colourimetric limit test. The 4AP limit is widened to 1000 ppm or 0.1% w/w for the tablet product monographs, which quote the use of a less sensitive automated HPLC method. The lower drug substance specification limit is applied to our products, (50 ppm, equivalent to 25 mug 4AP in a tablet containing 500-mg paracetamol) and the pharmacopoeial HPLC assay was not suitable at this low level due to matrix interference. For routine analysis a rapid, automated assay was required. This paper presents a highly sensitive, precise and automated method employing the technique of Flow Injection (FI) analysis to quantitatively assay low levels of this degradant. A solution of the drug substance, or an extract of the tablets, containing 4AP and paracetamol is injected into a solvent carrier stream and merged on-line with alkaline sodium nitroprusside reagent, to form a specific blue derivative which is detected spectrophotometrically at 710 nm. Standard HPLC equipment is used throughout. The procedure is fully quantitative and has been optimised for sensitivity and robustness using a multivariate experimental design (multi-level 'Central Composite' response surface) model. The method has been fully validated and is linear down to 0.01 mug ml(-1). The approach should be applicable to a range of paracetamol products.

Overcoming limits set by scarce resources - role of local food production and food imports

NASA Astrophysics Data System (ADS)

Porkka, Miina; Guillaume, Joseph H. A.; Schaphoff, Sibyll; Siebert, Stefan; Gerten, Dieter; Kummu, Matti

2017-04-01

There is a fundamental tension between population growth and carrying capacity, i.e. the population that could potentially be supported using the resources and technologies available at a given time. This makes the assessments of resource use and agricultural productivity central to the debate on future food security. Local carrying capacity can be increased by expanding (e.g. through land conversion and irrigation infrastructure) or intensifying (e.g. through technologies and practices that increase efficiency) the resource use in agriculture. Food imports can be considered another way of overcoming current local limits and continuing growth beyond the local human-carrying capacity. Focusing on water as the key limiting resource, we performed a global assessment of the capacity for food self-sufficiency at sub-national and national scale for 1961-2009, taking into account the availability of both green and blue water as well as technology and management practices affecting water productivity at a given time, and using the hydrology and agriculture model LPJmL as our primary tool. Furthermore, we examined the use of food imports as a strategy to increase carrying capacity in regions where the potential for food self-sufficiency was limited by water availability and productivity. We found that the capacity for food self-sufficiency reduced notably during the study period due to the rapid population growth that outpaced the substantial improvements in water productivity. In 2009 more than a third (2.2 billion people) of the world's population lived in areas where sufficient food production to meet the needs of the population was not possible, and some 800 million people more were approaching this threshold. Food imports have nearly universally been used to overcome these local limits to growth, though the success of this strategy has been highly dependent on economic purchasing power. In the unsuccessful cases, increases in imports and local productivity have not kept pace with population growth, leaving 460 million people with insufficient food. Where the strategy has been successful, food security of 1.4 billion people has become dependent on imports. Whether or not this dependence on imports is considered desirable, it has policy implications that need to be taken into account.

Estimates of immediate effects on world markets of a hypothetical disruption to Russia’s supply of six mineral commodities

USGS Publications Warehouse

Safirova, Elena; Barry, James J.; Hastorun, Sinan; Matos, Grecia R.; Perez, Alberto Alexander; Bedinger, George M.; Bray, E. Lee; Jasinski, Stephen M.; Kuck, Peter H.; Loferski, Patricia J.

2017-05-18

The potential immediate effects of a hypothetical shock to Russia’s supply of selected mineral commodities on the world market and on individual countries were determined and monetized (in 2014 U.S. dollars). The mineral commodities considered were aluminum (refined primary), nickel (refined primary), palladium (refined) and platinum (refined), potash, and titanium (mill products), and the regions and countries of primary interest were the United States, the European Union (EU–28), and China. The shock is assumed to have infinite duration, but only the immediate effects, those limited by a 1-year period, are considered.A methodology for computing and monetizing the potential impacts was developed. Then the data pertaining to all six mineral commodities were collected and the most likely effects were computed. Because of the uncertainties associated with some of the data, sensitivity analyses were conducted to confirm the validity of the results.Results indicate that the impact on the United States arising from a shock to Russia’s supply, in terms of the value of net exports, would range from a gain of \\$336 million for titanium mill products to a loss of \\$237 million for potash; thus, the overall effect of a supply shock is likely to be quite modest. The study also demonstrates that, taken alone, Russia’s share in the world production of a particular commodity is not necessarily indicative of the size of potential impacts resulting from a supply shock; other factors, such as prices, domestic production, and the structure of international commodity flows were found to be important as well.

Phytoplankton Productivity in an Arctic Fjord (West Greenland): Estimating Electron Requirements for Carbon Fixation and Oxygen Production

PubMed Central

Hancke, Kasper; Dalsgaard, Tage; Sejr, Mikael Kristian; Markager, Stiig; Glud, Ronnie Nøhr

2015-01-01

Accurate quantification of pelagic primary production is essential for quantifying the marine carbon turnover and the energy supply to the food web. Knowing the electron requirement (Κ) for carbon (C) fixation (Κ C) and oxygen (O2) production (Κ O2), variable fluorescence has the potential to quantify primary production in microalgae, and hereby increasing spatial and temporal resolution of measurements compared to traditional methods. Here we quantify Κ C and Κ O2 through measures of Pulse Amplitude Modulated (PAM) fluorometry, C fixation and O2 production in an Arctic fjord (Godthåbsfjorden, W Greenland). Through short- (2h) and long-term (24h) experiments, rates of electron transfer (ETRPSII), C fixation and/or O2 production were quantified and compared. Absolute rates of ETR were derived by accounting for Photosystem II light absorption and spectral light composition. Two-hour incubations revealed a linear relationship between ETRPSII and gross 14C fixation (R2 = 0.81) during light-limited photosynthesis, giving a Κ C of 7.6 ± 0.6 (mean ± S.E.) mol é (mol C)−1. Diel net rates also demonstrated a linear relationship between ETRPSII and C fixation giving a Κ C of 11.2 ± 1.3 mol é (mol C)−1 (R2 = 0.86). For net O2 production the electron requirement was lower than for net C fixation giving 6.5 ± 0.9 mol é (mol O2)−1 (R2 = 0.94). This, however, still is an electron requirement 1.6 times higher than the theoretical minimum for O2 production [i.e. 4 mol é (mol O2)−1]. The discrepancy is explained by respiratory activity and non-photochemical electron requirements and the variability is discussed. In conclusion, the bio-optical method and derived electron requirement support conversion of ETR to units of C or O2, paving the road for improved spatial and temporal resolution of primary production estimates. PMID:26218096

Mini review: hydrogen and ethanol co-production from waste materials via microbial fermentation.

PubMed

Soo, Chiu-Shyan; Yap, Wai-Sum; Hon, Wei-Min; Phang, Lai-Yee

2015-10-01

The simultaneous production of hydrogen and ethanol by microorganisms from waste materials in a bioreactor system would establish cost-effective and time-saving biofuel production. This review aims to present the current status of fermentation processes producing hydrogen accompanied by ethanol as a co-product. We outlined the microbes used and their fundamental pathways for hydrogen and ethanol fermentation. Moreover, we discussed the exploitation of renewable and sustainable waste materials as promising feedstock and the limitations encountered. The low substrate bioconversion rate in hydrogen and ethanol co-production is regarded as the primary constraint towards the development of large scale applications. Thus, microbes with an enhanced capability have been generated via genetic manipulation to diminish the inefficiency of substrate consumption. In this review, other potential approaches to improve the performance of co-production through fermentation were also elaborated. This review will be a useful guide for the future development of hydrogen and ethanol co-production using waste materials.

Phytoplankton-bacterial interactions mediate micronutrient colimitation at the coastal Antarctic sea ice edge.

PubMed

Bertrand, Erin M; McCrow, John P; Moustafa, Ahmed; Zheng, Hong; McQuaid, Jeffrey B; Delmont, Tom O; Post, Anton F; Sipler, Rachel E; Spackeen, Jenna L; Xu, Kai; Bronk, Deborah A; Hutchins, David A; Allen, Andrew E

2015-08-11

Southern Ocean primary productivity plays a key role in global ocean biogeochemistry and climate. At the Southern Ocean sea ice edge in coastal McMurdo Sound, we observed simultaneous cobalamin and iron limitation of surface water phytoplankton communities in late Austral summer. Cobalamin is produced only by bacteria and archaea, suggesting phytoplankton-bacterial interactions must play a role in this limitation. To characterize these interactions and investigate the molecular basis of multiple nutrient limitation, we examined transitions in global gene expression over short time scales, induced by shifts in micronutrient availability. Diatoms, the dominant primary producers, exhibited transcriptional patterns indicative of co-occurring iron and cobalamin deprivation. The major contributor to cobalamin biosynthesis gene expression was a gammaproteobacterial population, Oceanospirillaceae ASP10-02a. This group also contributed significantly to metagenomic cobalamin biosynthesis gene abundance throughout Southern Ocean surface waters. Oceanospirillaceae ASP10-02a displayed elevated expression of organic matter acquisition and cell surface attachment-related genes, consistent with a mutualistic relationship in which they are dependent on phytoplankton growth to fuel cobalamin production. Separate bacterial groups, including Methylophaga, appeared to rely on phytoplankton for carbon and energy sources, but displayed gene expression patterns consistent with iron and cobalamin deprivation. This suggests they also compete with phytoplankton and are important cobalamin consumers. Expression patterns of siderophore- related genes offer evidence for bacterial influences on iron availability as well. The nature and degree of this episodic colimitation appear to be mediated by a series of phytoplankton-bacterial interactions in both positive and negative feedback loops.

Evolution of the global phosphorus cycle.

PubMed

Reinhard, Christopher T; Planavsky, Noah J; Gill, Benjamin C; Ozaki, Kazumi; Robbins, Leslie J; Lyons, Timothy W; Fischer, Woodward W; Wang, Chunjiang; Cole, Devon B; Konhauser, Kurt O

2017-01-19

The macronutrient phosphorus is thought to limit primary productivity in the oceans on geological timescales. Although there has been a sustained effort to reconstruct the dynamics of the phosphorus cycle over the past 3.5 billion years, it remains uncertain whether phosphorus limitation persisted throughout Earth's history and therefore whether the phosphorus cycle has consistently modulated biospheric productivity and ocean-atmosphere oxygen levels over time. Here we present a compilation of phosphorus abundances in marine sedimentary rocks spanning the past 3.5 billion years. We find evidence for relatively low authigenic phosphorus burial in shallow marine environments until about 800 to 700 million years ago. Our interpretation of the database leads us to propose that limited marginal phosphorus burial before that time was linked to phosphorus biolimitation, resulting in elemental stoichiometries in primary producers that diverged strongly from the Redfield ratio (the atomic ratio of carbon, nitrogen and phosphorus found in phytoplankton). We place our phosphorus record in a quantitative biogeochemical model framework and find that a combination of enhanced phosphorus scavenging in anoxic, iron-rich oceans and a nutrient-based bistability in atmospheric oxygen levels could have resulted in a stable low-oxygen world. The combination of these factors may explain the protracted oxygenation of Earth's surface over the last 3.5 billion years of Earth history. However, our analysis also suggests that a fundamental shift in the phosphorus cycle may have occurred during the late Proterozoic eon (between 800 and 635 million years ago), coincident with a previously inferred shift in marine redox states, severe perturbations to Earth's climate system, and the emergence of animals.

Phytoplankton–bacterial interactions mediate micronutrient colimitation at the coastal Antarctic sea ice edge

PubMed Central

Bertrand, Erin M.; McCrow, John P.; Moustafa, Ahmed; Zheng, Hong; McQuaid, Jeffrey B.; Delmont, Tom O.; Post, Anton F.; Sipler, Rachel E.; Spackeen, Jenna L.; Xu, Kai; Bronk, Deborah A.; Hutchins, David A.; Allen, Andrew E.

2015-01-01

Southern Ocean primary productivity plays a key role in global ocean biogeochemistry and climate. At the Southern Ocean sea ice edge in coastal McMurdo Sound, we observed simultaneous cobalamin and iron limitation of surface water phytoplankton communities in late Austral summer. Cobalamin is produced only by bacteria and archaea, suggesting phytoplankton–bacterial interactions must play a role in this limitation. To characterize these interactions and investigate the molecular basis of multiple nutrient limitation, we examined transitions in global gene expression over short time scales, induced by shifts in micronutrient availability. Diatoms, the dominant primary producers, exhibited transcriptional patterns indicative of co-occurring iron and cobalamin deprivation. The major contributor to cobalamin biosynthesis gene expression was a gammaproteobacterial population, Oceanospirillaceae ASP10-02a. This group also contributed significantly to metagenomic cobalamin biosynthesis gene abundance throughout Southern Ocean surface waters. Oceanospirillaceae ASP10-02a displayed elevated expression of organic matter acquisition and cell surface attachment-related genes, consistent with a mutualistic relationship in which they are dependent on phytoplankton growth to fuel cobalamin production. Separate bacterial groups, including Methylophaga, appeared to rely on phytoplankton for carbon and energy sources, but displayed gene expression patterns consistent with iron and cobalamin deprivation. This suggests they also compete with phytoplankton and are important cobalamin consumers. Expression patterns of siderophore- related genes offer evidence for bacterial influences on iron availability as well. The nature and degree of this episodic colimitation appear to be mediated by a series of phytoplankton–bacterial interactions in both positive and negative feedback loops. PMID:26221022

PRIMARY PRODUCTION ESTIMATES IN CHESAPEAKE BAY USING SEAWIFS

EPA Science Inventory

The temporal and spatial variability in primary production along the main stem of Chesapeake Bay was examined from 1997 through 2000. Primary production estimates were determined from the Vertically Generalized Production Model (VGPM) (Behrenfeld and Falkowski, 1997) using chloro...

[Nutritional analysis of dietary patterns in students of primary education with normal nutritional status].

PubMed

Durá-Gúrpide, Beatriz; Durá-Travé, Teodoro

2014-06-01

To perform a nutritional assessment of the dietary model in a group of primary school students (9-12 years) with a normal nutritional status. Recording of food consumption of two consecutive school days in a sample of 353 primary school students (188 boys and 165 girls) with normal nutritional situation. The intake of energy, macronutrients, minerals, and vitamins was calculated and compared with the recommended intakes. The mean value of daily caloric intake was 2,066.9 kcal. Grains (33%), dairy products (19%) and meats (17%) represented 70% of the total caloric intake. Proteins contributed with 20.3% of the caloric intake, sugars 48.8%, lipids 30.9%, and saturated fats 12.6%. Cholesterol intake was excessive and 2/3 of the caloric intake was of animal origin. The mean intake of calcium, iodine and A, D and E vitamins were lower than de recommended dietary intakes. The dietary model of the primary school students with normal nutritional status varies from the Mediterranean prototype, with an excessive intake of meats, limited intake of grains and dairy products, and deficient intake of vegetables, fruits, legumes, and fishes. This leads to an increase in the intake of proteins and fats from animals with a detriment of complex carbohydrates and a deficient intake of calcium, iodine, and vitamins A, D y E. Copyright AULA MEDICA EDICIONES 2014. Published by AULA MEDICA. All rights reserved.

Accurate prediction of collapse temperature using optical coherence tomography-based freeze-drying microscopy.

PubMed

Greco, Kristyn; Mujat, Mircea; Galbally-Kinney, Kristin L; Hammer, Daniel X; Ferguson, R Daniel; Iftimia, Nicusor; Mulhall, Phillip; Sharma, Puneet; Kessler, William J; Pikal, Michael J

2013-06-01

The objective of this study was to assess the feasibility of developing and applying a laboratory tool that can provide three-dimensional product structural information during freeze-drying and which can accurately characterize the collapse temperature (Tc ) of pharmaceutical formulations designed for freeze-drying. A single-vial freeze dryer coupled with optical coherence tomography freeze-drying microscopy (OCT-FDM) was developed to investigate the structure and Tc of formulations in pharmaceutically relevant products containers (i.e., freeze-drying in vials). OCT-FDM was used to measure the Tc and eutectic melt of three formulations in freeze-drying vials. The Tc as measured by OCT-FDM was found to be predictive of freeze-drying with a batch of vials in a conventional laboratory freeze dryer. The freeze-drying cycles developed using OCT-FDM data, as compared with traditional light transmission freeze-drying microscopy (LT-FDM), resulted in a significant reduction in primary drying time, which could result in a substantial reduction of manufacturing costs while maintaining product quality. OCT-FDM provides quantitative data to justify freeze-drying at temperatures higher than the Tc measured by LT-FDM and provides a reliable upper limit to setting a product temperature in primary drying. Copyright © 2013 Wiley Periodicals, Inc.

Namib Desert primary productivity is driven by cryptic microbial community N-fixation.

PubMed

Ramond, Jean-Baptiste; Woodborne, Stephan; Hall, Grant; Seely, Mary; Cowan, Don A

2018-05-02

Carbon exchange in drylands is typically low, but during significant rainfall events (wet anomalies) drylands act as a C sink. During these anomalies the limitation on C uptake switches from water to nitrogen. In the Namib Desert of southern Africa, the N inventory in soil organic matter available for mineralisation is insufficient to support the observed increase in primary productivity. The C4 grasses that flourish after rainfall events are not capable of N fixation, and so there is no clear mechanism for adequate N fixation in dryland ecosystems to support rapid C uptake. Here we demonstrate that N fixation by photoautotrophic hypolithic communities forms the basis for the N budget for plant productivity events in the Namib Desert. Stable N isotope (δ 15 N) values of Namib Desert hypolithic biomass, and surface and subsurface soils were measured over 3 years across dune and gravel plain biotopes. Hypoliths showed significantly higher biomass and lower δ 15 N values than soil organic matter. The δ 15 N values of hypoliths approach the theoretical values for nitrogen fixation. Our results are strongly indicative that hypolithic communities are the foundation of productivity after rain events in the Namib Desert and are likely to play similar roles in other arid environments.

Chlorophyll Fluorescence Better Captures Seasonal and Interannual Gross Primary Productivity Dynamics Across Dryland Ecosystems of Southwestern North America

NASA Astrophysics Data System (ADS)

Smith, W. K.; Biederman, J. A.; Scott, R. L.; Moore, D. J. P.; He, M.; Kimball, J. S.; Yan, D.; Hudson, A.; Barnes, M. L.; MacBean, N.; Fox, A. M.; Litvak, M. E.

2018-01-01

Satellite remote sensing provides unmatched spatiotemporal information on vegetation gross primary productivity (GPP). Yet understanding of the relationship between GPP and remote sensing observations and how it changes with factors such as scale, biophysical constraint, and vegetation type remains limited. This knowledge gap is especially apparent for dryland ecosystems, which have characteristic high spatiotemporal variability and are under-represented by long-term field measurements. Here we utilize an eddy covariance (EC) data synthesis for southwestern North America in an assessment of how accurately satellite-derived vegetation proxies capture seasonal to interannual GPP dynamics across dryland gradients. We evaluate the enhanced vegetation index, solar-induced fluorescence (SIF), and the photochemical reflectivity index. We find evidence that SIF is more accurately capturing seasonal GPP dynamics particularly for evergreen-dominated EC sites and more accurately estimating the full magnitude of interannual GPP dynamics for all dryland EC sites. These results suggest that incorporation of SIF could significantly improve satellite-based GPP estimates.

Centrosomal Latency of Incoming Foamy Viruses in Resting Cells

PubMed Central

Giron, Marie Lou; Roingeard, Philippe; Clave, Emmanuel; Tobaly-Tapiero, Joelle; Bittoun, Patricia; Toubert, Antoine; de Thé, Hugues; Saïb, Ali

2007-01-01

Completion of early stages of retrovirus infection depends on the cell cycle. While gammaretroviruses require mitosis for proviral integration, lentiviruses are able to replicate in post-mitotic non-dividing cells. Resting cells such as naive resting T lymphocytes from peripheral blood cannot be productively infected by retroviruses, including lentiviruses, but the molecular basis of this restriction remains poorly understood. We demonstrate that in G0 resting cells (primary fibroblasts or peripheral T cells), incoming foamy retroviruses accumulate in close proximity to the centrosome, where they lie as structured and assembled capsids for several weeks. Under these settings, virus uncoating is impaired, but upon cell stimulation, Gag proteolysis and capsid disassembly occur, which allows viral infection to proceed. The data imply that foamy virus uncoating is the rate-limiting step for productive infection of primary G0 cells. Incoming foamy retroviruses can stably persist at the centrosome, awaiting cell stimulation to initiate capsid cleavage, nuclear import, and viral gene expression. PMID:17530924

Background observations on the SMM high energy monitor at energies greater than 10 MeV

NASA Technical Reports Server (NTRS)

Forrest, D. J.

1989-01-01

The background rate in any gamma ray detector on a spacecraft in near-earth orbit is strongly influenced by the primary cosmic ray flux at the spacecraft's position. Although the direct counting of the primary cosmic rays can be rejected by anticoincident shields, secondary production cannot be. Secondary production of gamma rays and neutrons in the instrument, the spacecraft, and the earth's atmospheric are recorded as background. A 30 day data base of 65.5 second records has been used to show that some of the background rates observed on the Gamma Ray Spectrometer can be ordered to a precision on the order of 1 percent This ordering is done with only two parameters, namely the cosmic ray vertical cutoff rigidity and the instrument's pointing angle with respect to the earth's center. This result sets limits on any instrumental instability and also on any temporal or spatial changes in the background radiation field.

Particle flux in deep seas: regional characteristics and temporal variability

NASA Astrophysics Data System (ADS)

Lampitt, R. S.; Antia, A. N.

1997-08-01

Particle flux data have been collated from the literature representing most areas of the open ocean to determine regional trends in deep water flux and its seasonal variability. Organic carbon flux data normalised to a depth of 2000 m exhibits a range of an order of magnitude in areas outside the polar domains (0.38 to 4.2 g/m2/y). In polar regions the range is wider (0.01-5.9 g/m2/y). Latitudinal trends are not apparent for most components of the flux although calcite flux exhibits a poleward decrease. Limited data from polar regions show fluxes of opaline silica not significantly higher than elsewhere. The variability of flux over annual cycles was calculated and expressed as a Flux Stability Index (FSI) and the relationship between this and vertical flux of material examined. Somewhat surprisingly there is no significant relationship between FSI and fluxes of dry mass, organic carbon, inorganic carbon or opaline silica. At each site, net annual primary production was determined using published satellite derived estimates. There is a negative but weak relationship between FSI and the proportion of primary production exported to 2000 m (e2000 ratio). The most variable of the non-polar environments export to 2000 m about twice as much of the primary production as the most stable ones. Polar environments have very low e2000 ratios with no apparent relationship to FSI. At primary production levels below 200 g C/m2/y there is a positive correlation between production and organic carbon flux at 2000 m but above this level, flux remains constant at about 3.5g C/m2/y. A curve derived to describe this relationship was applied to estimates of annual primary production in each of 34 of the open ocean biogeochemical provinces proposed by Longhurst et al. (1995). Globally, open ocean flux of organic carbon at 2000 m is 0.34 Gt/yr which is 1% of the total net primary production in these regions. This flux is nearly equally divided between the Atlantic, Pacific and Southern Oceans. The Indian and Arctic oceans between them only contribute 5% to the total. The eight planktonic climatological categories proposed by Longhurst (1995) provide a most useful means of examining the data on flux and its variability. A characteristic level of FSI was found in each category with highest levels in the tropics and lowest levels in the Antarctic. There is also a characteristic level of export ratio in each category with the highest in monsoonal environments (1.7%) and the lowest in Antarctica (0.1%).

Energy release properties of amorphous boron and boron-based propellant primary combustion products

NASA Astrophysics Data System (ADS)

Liang, Daolun; Liu, Jianzhong; Xiao, Jinwu; Xi, Jianfei; Wang, Yang; Zhang, Yanwei; Zhou, Junhu

2015-07-01

The microstructure of amorphous boron and the primary combustion products of boron-based fuel-rich propellant (hereafter referred to as primary combustion products) was analyzed by scanning electron microscope. Composition analysis of the primary combustion products was carried out by X-ray diffraction and X-ray photoelectron spectroscopy. The energy release properties of amorphous boron and the primary combustion products were comparatively studied by laser ignition experimental system and thermogravimetry-differential scanning calorimetry. The primary combustion products contain B, C, Mg, Al, B4C, B13C2, BN, B2O3, NH4Cl, H2O, and so on. The energy release properties of primary combustion products are different from amorphous boron, significantly. The full-time spectral intensity of primary combustion products at a wavelength of 580 nm is ~2% lower than that of amorphous boron. The maximum spectral intensity of the former at full wave is ~5% higher than that of the latter. The ignition delay time of primary combustion products is ~150 ms shorter than that of amorphous boron, and the self-sustaining combustion time of the former is ~200 ms longer than that of the latter. The thermal oxidation process of amorphous boron involves water evaporation (weight loss) and boron oxidation (weight gain). The thermal oxidation process of primary combustion products involves two additional steps: NH4Cl decomposition (weight loss) and carbon oxidation (weight loss). CL-20 shows better combustion-supporting effect than KClO4 in both the laser ignition experiments and the thermal oxidation experiments.

A critical assessment of the ecological assumptions underpinning compensatory mitigation of salmon-derived nutrients

USGS Publications Warehouse

Collins, Scott F.; Marcarelli, Amy M.; Baxter, Colden V.; Wipfli, Mark S.

2015-01-01

We critically evaluate some of the key ecological assumptions underpinning the use of nutrient replacement as a means of recovering salmon populations and a range of other organisms thought to be linked to productive salmon runs. These assumptions include: (1) nutrient mitigation mimics the ecological roles of salmon, (2) mitigation is needed to replace salmon-derived nutrients and stimulate primary and invertebrate production in streams, and (3) food resources in rearing habitats limit populations of salmon and resident fishes. First, we call into question assumption one because an array of evidence points to the multi-faceted role played by spawning salmon, including disturbance via redd-building, nutrient recycling by live fish, and consumption by terrestrial consumers. Second, we show that assumption two may require qualification based upon a more complete understanding of nutrient cycling and productivity in streams. Third, we evaluate the empirical evidence supporting food limitation of fish populations and conclude it has been only weakly tested. On the basis of this assessment, we urge caution in the application of nutrient mitigation as a management tool. Although applications of nutrients and other materials intended to mitigate for lost or diminished runs of Pacific salmon may trigger ecological responses within treated ecosystems, contributions of these activities toward actual mitigation may be limited.

Trade-offs in plant responses to herbivory influence trophic routes of production in a freshwater wetland.

PubMed

Cherry, Julia A; Gough, Laura

2009-09-01

Responses of aquatic macrophytes to leaf herbivory may differ from those documented for terrestrial plants, in part, because the potential to maximize growth following herbivory may be limited by the stress of being rooted in flooded, anaerobic sediments. Herbivory on aquatic macrophytes may have ecosystem consequences by altering the allocation of nutrients and production of biomass within individual plants and changing the quality and quantity of aboveground biomass available to consumers or decomposers. To test the effects of leaf herbivory on plant growth and production, herbivory of a dominant macrophyte, Nymphaea odorata, by chrysomelid beetles and crambid moths was controlled during a 2-year field experiment. Plants exposed to herbivory maintained, or tended to increase, biomass and aboveground net primary production relative to controls, which resulted in 1.5 times more aboveground primary production entering the detrital pathway of the wetland. In a complementary greenhouse experiment, the effects of simulated leaf herbivory on total plant responses, including biomass and nutrient allocation, were investigated. Plants in the greenhouse responded to moderate herbivory by maintaining aboveground biomass relative to controls, but this response occurred at the expense of belowground growth. Results of these studies suggest that N. odorata may tolerate moderate levels of herbivory by reallocating biomass and resources aboveground, which in turn influences the quantity, quality and fate of organic matter available to herbivores and decomposers.

Climate Induced Changes in Global-Scale Litter Decomposition and Long-term Relationships with Net Primary Productivity

NASA Astrophysics Data System (ADS)

Silver, W. L.; Smith, W. K.; Parton, W. J.; Wieder, W. R.; DelGrosso, S.

2016-12-01

Surface litter decomposition represents the largest annual carbon (C) flux to the atmosphere from terrestrial ecosystems (Esser et al. 1982). Using broad-scale long-term datasets we show that litter decomposition rates are largely predicted by a climate-decomposition index (CDI) at a global scale, and use CDI to estimate patterns in litter decomposition over the 110 years from 1901-2011. There were rapid changes in CDI over the last 30 y of the record amounting to a 4.3% increase globally. Boreal forests (+13.9%), tundra (+12.2%), savannas (+5.3%), and temperate (+2.4%) and tropical (+2.1%) forests all experienced accelerated decomposition. During the same period, most biomes experienced corresponding increases in a primary production index (PPI) estimated from an ensemble of long-term, observation-based productivity indices. The percent increase in PPI was only half that of decomposition globally. Tropical forests and savannas showed no increase in PPI to offset greater decomposition rates. Temperature-limited ecosystems (i.e., tundra, boreal, and temperate forests) showed the greatest differences between CDI and PPI, highlighting potentially large decoupling of C fluxes in these biomes. Precipitation and actual evapotranspiration were the best climate predictors of CDI at a global scale, while PPI varied consistently with actual evapotranspiration. As expected, temperature was the best predictor of PPI across temperature limited ecosystems. Our results show that climate change could be leading to a decoupling of C uptake and losses, potentially resulting in lower C storage in northern latitudes, temperate and tropical forests, and savannas.

Using normalized difference vegetation index to estimate carbon fluxes from small rotationally grazed pastures

USGS Publications Warehouse

Skinner, R.H.; Wylie, B.K.; Gilmanov, T.G.

2011-01-01

Satellite-based normalized difference vegetation index (NDVI) data have been extensively used for estimating gross primary productivity (GPP) and yield of grazing lands throughout the world. However, the usefulness of satellite-based images for monitoring rotationally-grazed pastures in the northeastern United States might be limited because paddock size is often smaller than the resolution limits of the satellite image. This research compared NDVI data from satellites with data obtained using a ground-based system capable of fine-scale (submeter) NDVI measurements. Gross primary productivity was measured by eddy covariance on two pastures in central Pennsylvania from 2003 to 2008. Weekly 250-m resolution satellite NDVI estimates were also obtained for each pasture from the moderate resolution imaging spectroradiometer (MODIS) sensor. Ground-based NDVI data were periodically collected in 2006, 2007, and 2008 from one of the two pastures. Multiple-regression and regression-tree estimates of GPP, based primarily on MODIS 7-d NDVI and on-site measurements of photosynthetically active radiation (PAR), were generally able to predict growing-season GPP to within an average of 3% of measured values. The exception was drought years when estimated and measured GPP differed from each other by 11 to 13%. Ground-based measurements improved the ability of vegetation indices to capture short-term grazing management effects on GPP. However, the eMODIS product appeared to be adequate for regional GPP estimates where total growing-season GPP across a wide area would be of greater interest than short-term management-induced changes in GPP at individual sites.

Effects of nitrogen deposition and cattle grazing on productivity, invasion impact, and soil microbial processes in a serpentine grassland

NASA Astrophysics Data System (ADS)

Pasari, J.; Hernandez, D.; Selmants, P. C.; Keck, D.

2010-12-01

In recent decades, human activities have vastly increased the amount of biologically available nitrogen (N) in the biosphere. The resulting increase in N availability has broadly affected ecosystems through increased productivity, changes in species composition, altered nutrient cycles, and increases in invasion by exotic plant species, especially in systems that were historically low in N. California serpentine grasslands are N-limited ecosystems historically dominated by native species including several threatened and endangered plants and animals. Cattle grazing has emerged as the primary tool for controlling the impact of nitrophilic exotic grasses whose increased abundance has paralleled the regional traffic-derived increase in atmospheric N deposition. We examined the interactive effects of cattle grazing and N deposition on plant community composition, productivity, invasion resistance, and microbial processes in the Bay Area's largest serpentine grassland to determine the efficacy of current management strategies as well as the biogeochemical consequences of exotic species invasion. In the first two years of the study, aboveground net primary productivity decreased in response to grazing and increased in response to nitrogen addition. However, contrary to our hypotheses the change in productivity was not due to an increase in exotic species cover as there was little overall effect of grazing or N addition on species composition. Microbial activity was more responsive to grazing and N. Potential net N mineralization rates increased with N addition, but were not affected by grazing. In contrast, soil respiration rates were inhibited by grazing, but were not affected by N addition; suggesting strong carbon-limitation of soil microbial activity, particularly under grazing. Site differences in soil depth and grazing intensity were often more important than treatment effects. We suspect that the unusually dry conditions in the first two growing seasons inhibited the growth of exotic species and minimized the effects of cattle exclusion and N addition on species composition.

Photorespiration and carbon limitation determine productivity in temperate seagrasses.

PubMed

Buapet, Pimchanok; Rasmusson, Lina M; Gullström, Martin; Björk, Mats

2013-01-01

The gross primary productivity of two seagrasses, Zostera marina and Ruppia maritima, and one green macroalga, Ulva intestinalis, was assessed in laboratory and field experiments to determine whether the photorespiratory pathway operates at a substantial level in these macrophytes and to what extent it is enhanced by naturally occurring shifts in dissolved inorganic carbon (DIC) and O2 in dense vegetation. To achieve these conditions in laboratory experiments, seawater was incubated with U. intestinalis in light to obtain a range of higher pH and O2 levels and lower DIC levels. Gross photosynthetic O2 evolution was then measured in this pretreated seawater (pH, 7.8-9.8; high to low DIC:O2 ratio) at both natural and low O2 concentrations (adjusted by N2 bubbling). The presence of photorespiration was indicated by a lower gross O2 evolution rate under natural O2 conditions than when O2 was reduced. In all three macrophytes, gross photosynthetic rates were negatively affected by higher pH and lower DIC. However, while both seagrasses exhibited significant photorespiratory activity at increasing pH values, the macroalga U. intestinalis exhibited no such activity. Rates of seagrass photosynthesis were then assessed in seawater collected from the natural habitats (i.e., shallow bays characterized by high macrophyte cover and by low DIC and high pH during daytime) and compared with open baymouth water conditions (where seawater DIC is in equilibrium with air, normal DIC, and pH). The gross photosynthetic rates of both seagrasses were significantly higher when incubated in the baymouth water, indicating that these grasses can be significantly carbon limited in shallow bays. Photorespiration was also detected in both seagrasses under shallow bay water conditions. Our findings indicate that natural carbon limitations caused by high community photosynthesis can enhance photorespiration and cause a significant decline in seagrass primary production in shallow waters.

Performance of a two-leaf light use efficiency model for mapping gross primary productivity against remotely sensed sun-induced chlorophyll fluorescence data.

PubMed

Zan, Mei; Zhou, Yanlian; Ju, Weimin; Zhang, Yongguang; Zhang, Leiming; Liu, Yibo

2018-02-01

Estimating terrestrial gross primary production is an important task when studying the carbon cycle. In this study, the ability of a two-leaf light use efficiency model to simulate regional gross primary production in China was validated using satellite Global Ozone Monitoring Instrument - 2 sun-induced chlorophyll fluorescence data. The two-leaf light use efficiency model was used to estimate daily gross primary production in China's terrestrial ecosystems with 500-m resolution for the period from 2007 to 2014. Gross primary production simulated with the two-leaf light use efficiency model was resampled to a spatial resolution of 0.5° and then compared with sun-induced chlorophyll fluorescence. During the study period, sun-induced chlorophyll fluorescence and gross primary production simulated by the two-leaf light use efficiency model exhibited similar spatial and temporal patterns in China. The correlation coefficient between sun-induced chlorophyll fluorescence and monthly gross primary production simulated by the two-leaf light use efficiency model was significant (p<0.05, n=96) in 88.9% of vegetated areas in China (average value 0.78) and varied among vegetation types. The interannual variations in monthly sun-induced chlorophyll fluorescence and gross primary production simulated by the two-leaf light use efficiency model were similar in spring and autumn in most vegetated regions, but dissimilar in winter and summer. The spatial variability of sun-induced chlorophyll fluorescence and gross primary production simulated by the two-leaf light use efficiency model was similar in spring, summer, and autumn. The proportion of spatial variations of sun-induced chlorophyll fluorescence and annual gross primary production simulated by the two-leaf light use efficiency model explained by ranged from 0.76 (2011) to 0.80 (2013) during the study period. Overall, the two-leaf light use efficiency model was capable of capturing spatial and temporal variations in gross primary production in China. However, the model needs further improvement to better simulate gross primary production in summer. Copyright © 2017 Elsevier B.V. All rights reserved.

Phytoplankton primary production in the world's estuarine-coastal ecosystems

USGS Publications Warehouse

Cloern, James E.; Foster, S.Q.; Kleckner, A.E.

2014-01-01

Estuaries are biogeochemical hot spots because they receive large inputs of nutrients and organic carbon from land and oceans to support high rates of metabolism and primary production. We synthesize published rates of annual phytoplankton primary production (APPP) in marine ecosystems influenced by connectivity to land – estuaries, bays, lagoons, fjords and inland seas. Review of the scientific literature produced a compilation of 1148 values of APPP derived from monthly incubation assays to measure carbon assimilation or oxygen production. The median value of median APPP measurements in 131 ecosystems is 185 and the mean is 252 g C m−2 yr−1, but the range is large: from −105 (net pelagic production in the Scheldt Estuary) to 1890 g C m−2 yr−1 (net phytoplankton production in Tamagawa Estuary). APPP varies up to 10-fold within ecosystems and 5-fold from year to year (but we only found eight APPP series longer than a decade so our knowledge of decadal-scale variability is limited). We use studies of individual places to build a conceptual model that integrates the mechanisms generating this large variability: nutrient supply, light limitation by turbidity, grazing by consumers, and physical processes (river inflow, ocean exchange, and inputs of heat, light and wind energy). We consider method as another source of variability because the compilation includes values derived from widely differing protocols. A simulation model shows that different methods reported in the literature can yield up to 3-fold variability depending on incubation protocols and methods for integrating measured rates over time and depth. Although attempts have been made to upscale measures of estuarine-coastal APPP, the empirical record is inadequate for yielding reliable global estimates. The record is deficient in three ways. First, it is highly biased by the large number of measurements made in northern Europe (particularly the Baltic region) and North America. Of the 1148 reported values of APPP, 958 come from sites between 30 and 60° N; we found only 36 for sites south of 20° N. Second, of the 131 ecosystems where APPP has been reported, 37% are based on measurements at only one location during 1 year. The accuracy of these values is unknown but probably low, given the large interannual and spatial variability within ecosystems. Finally, global assessments are confounded by measurements that are not intercomparable because they were made with different methods. Phytoplankton primary production along the continental margins is tightly linked to variability of water quality, biogeochemical processes including ocean–atmosphere CO2 exchange, and production at higher trophic levels including species we harvest as food. The empirical record has deficiencies that preclude reliable global assessment of this key Earth system process. We face two grand challenges to resolve these deficiencies: (1) organize and fund an international effort to use a common method and measure APPP regularly across a network of coastal sites that are globally representative and sustained over time, and (2) integrate data into a unifying model to explain the wide range of variability across ecosystems and to project responses of APPP to regional manifestations of global change as it continues to unfold.

Metabolic cytometry: capillary electrophoresis with two-color fluorescence detection for the simultaneous study of two glycosphingolipid metabolic pathways in single primary neurons.

PubMed

Essaka, David C; Prendergast, Jillian; Keithley, Richard B; Palcic, Monica M; Hindsgaul, Ole; Schnaar, Ronald L; Dovichi, Norman J

2012-03-20

Metabolic cytometry is a form of chemical cytometry wherein metabolic cascades are monitored in single cells. We report the first example of metabolic cytometry where two different metabolic pathways are simultaneously monitored. Glycolipid catabolism in primary rat cerebella neurons was probed by incubation with tetramethylrhodamine-labeled GM1 (GM1-TMR). Simultaneously, both catabolism and anabolism were probed by coincubation with BODIPY-FL labeled LacCer (LacCer-BODIPY-FL). In a metabolic cytometry experiment, single cells were incubated with substrate, washed, aspirated into a capillary, and lysed. The components were separated by capillary electrophoresis equipped with a two-spectral channel laser-induced fluorescence detector. One channel monitored fluorescence generated by the metabolic products produced from GM1-TMR and the other monitored the metabolic products produced from LacCer-BODIPY-FL. The metabolic products were identified by comparison with the mobility of a set of standards. The detection system produced at least 6 orders of magnitude dynamic range in each spectral channel with negligible spectral crosstalk. Detection limits were 1 zmol for BODIPY-FL and 500 ymol for tetramethylrhodamine standard solutions.

Comparison of North and South American biomes from AVHRR observations

NASA Technical Reports Server (NTRS)

Goward, Samuel N.; Dye, Dennis; Kerber, Arlene; Kalb, Virginia

1987-01-01

Previous analysis of the North American continent with AVHRR-derived vegetation index measurements showed a strong relation between known patterns of vegetation seasonality, productivity and the spectral vegetation index measurements. This study extends that analysis to South America to evaluate the degree to which these findings extend to tropical regions. The results show that the spectral vegetation index measurements provide a general indicator of vegetation activity across the major biomes of the Western Hemisphere of the earth, including tropical regions. The satellite-observed patterns are strongly related to the known climatology of the continents and may offer a means to improve understanding of global bioclimatology. For example, South America is shown to have a longer growing season with much earlier spring green-up than North America. The time integral of the measurements, computed from 12 composited monthly values, produces a value that is related to published net primary productivity data. However, limited net primary production data does not allow complete evaluation of satellite-observed contrasts between North and South American biomes. These results suggest that satellite-derived spectral vegetation index measurements are of great potential value in improving knowledge of the earth's biosphere.

In Situ and Ex Situ Estimates of Benthic Silica Fluxes in NGOM Shelf Sediments

NASA Astrophysics Data System (ADS)

Ebner, B. C.; Ghaisas, N. A.; Maiti, K.

2017-12-01

Biogenic silica (bSi), plays an important role in regulating primary productivity of diatoms in coastal and shelf ecosystems fed by major rivers. In the Northern Gulf of Mexico (NGOM), loading of nitrogen (N) and phosphorous (P) have increased compared to a decline in silicic acid in the Mississippi River (MR). Continued decreasing in silicic acid concentration could lead to limited diatom growth and production, therefore, it is important understand the role of benthic fluxes in providing silica to the overlying water column. The benthic flux of Si from shelf sediments can thus represent an important source of Si to be utilized by diatoms. Sediment core incubations and benthic chamber deployments were conducted at 5 sites in the Mississippi river plume with varying salinities during periods of high river discharge (May 2017), low river discharge (August 2016) and peak in hypoxia (July 2017). Preliminary data indicates large spatial and temporal variability in benthic silica fluxes ranging between 1.1 to 5.9 mmol/m2/d. This large variability in benthic silica flux is probably related to the seasonal changes in river discharge, primary production, community composition and sediment biogeochemistry in the region.

Understanding human impact on the Baltic ecosystem: changing views in recent decades.

PubMed

Elmgren, R

2001-08-01

Grave environmental problems, including contamination of biota by organochlorines and heavy metals, and increasing deep-water oxygen deficiency, were discovered in the Baltic Sea in the late 1960s. Toxic pollutants, including the newly discovered PCB, were initially seen as the main threat to the Baltic ecosystem, and the impaired reproduction found in Baltic seals and white-tailed eagles implied a threat also to human fish eaters. Countermeasures gradually gave results, and today the struggle to limit toxic pollution of the Baltic is an international environmental success story. Calculations showed that Baltic deep-water oxygen consumption must have increased, and that the Baltic nutrient load had grown about fourfold for nitrogen and 8 times for phosphorus. Evidence of increased organic production at all trophic levels in the ecosystem gradually accumulated. Phosphorus was first thought to limit Baltic primary production, but measurements soon showed that nitrogen is generally limiting in the open Baltic proper, except for nitrogen-fixing cyanobacteria. Today, the debate is concerned with whether phosphorus, by limiting nitrogen-fixers, can control open-sea ecosystem production, even where phytoplankton is clearly nitrogen limited. The Baltic lesson teaches us that our views of newly discovered environmental problems undergo repeated changes, and that it may take decades for scientists to agree on their causes. Once society decides on countermeasures, it may take decades for them to become effective, and for nature to recover. Thus, environmental management decisions can hardly wait for scientific certainty. We should therefore view environmental management decisions as experiments, to be monitored, learned from, and then modified as needed.

Light Limitation within Southern New Zealand Kelp Forest Communities

PubMed Central

Desmond, Matthew J.; Pritchard, Daniel W.; Hepburn, Christopher D.

2015-01-01

Light is the fundamental driver of primary productivity in the marine environment. Reduced light availability has the potential to alter the distribution, community composition, and productivity of key benthic primary producers, potentially reducing habitat and energy provision to coastal food webs. We compared the underwater light environment of macroalgal dominated shallow subtidal rocky reef habitats on a coastline modified by human activities with a coastline of forested catchments. Key metrics describing the availability of photosynthetically active radiation (PAR) were determined over 295 days and were related to macroalgal depth distribution, community composition, and standing biomass patterns, which were recorded seasonally. Light attenuation was more than twice as high in shallow subtidal zones along the modified coast. Macroalgal biomass was 2–5 times greater within forested sites, and even in shallow water (2m) a significant difference in biomass was observed. Long-term light dose provided the best explanation for differences in observed biomass between modified and forested coasts, with light availability over the study period differing by 60 and 90 mol photons m−2 at 2 and 10 metres, respectively. Higher biomass on the forested coast was driven by the presence of larger individuals rather than species diversity or density. This study suggests that commonly used metrics such as species diversity and density are not as sensitive as direct measures of biomass when detecting the effects of light limitation within macroalgal communities. PMID:25902185

Summertime photochemistry during CAREBeijing-2007: ROx budgets and O3 formation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Zhen; Wang, Y.; Gu, Dasa

2012-08-28

We analyze summertime photochemistry near the surface in Beijing, China, using a 1-D photochemical model (Regional chEmical and trAnsport Model, REAM-1D) constrained by in situ observations, focusing on the budgets of ROx (OH + HO2 + RO2) radicals and O3 formation. While the modeling analysis focuses on near-surface photochemical budgets, the implications for the budget of O3 in the planetary boundary layer are also discussed. In terms of daytime average, the total ROx primary production rate near the surface in Beijing is 6.6 ppbv per hour (ppbv h{sup 1}, among the highest found in urban atmospheres. The largest primary ROxmore » source in Beijing is photolysis of oxygenated volatile organic compounds (OVOCs), which produces HO2 and RO2 at 2.5 ppbv h{sup 1}1 and 1.7 ppbv h{sup 1}, respectively. Photolysis of excess HONO from an unknown heterogeneous source is the predominant primary OH source at 2.2 ppbv h{sup 1}, much larger than that of O1D+H2O (0.4 ppbv h{sup 1}). The largest ROx sink is via OH + NO2 reaction (1.6 ppbv h{sup 1}), followed by formation of RO2NO2 (1.0 ppbv h{sup 1}) and RONO2 (0.7 ppbv h{sup 1}). Due to the large aerosol surface area, aerosol uptake of HO2 appears to be another important radical sink, although the estimate of its magnitude is highly variable depending on the uptake coefficient value used. The daytime average O3 production and loss rates near the surface are 32 ppbv h{sup 1} and 6.2 ppbv h{sup 1}, respectively. Assuming NO2 to be the source of excess HONO, the NO2 to HONO transformation leads to considerable O3 loss and reduction of its lifetime. Our observation-constrained modeling analysis suggests that oxidation of VOCs (especially aromatics) and heterogeneous reactions (e.g. HONO formation and aerosol uptake HO2) play potentially critical roles in the primary radical budget and O3 formation in Beijing. One important ramification is that O3 production is neither NOx nor VOC limited, but in a transition regime where reduction of either NOx or VOCs could result in reduction of O3 production. The transition regime implies more flexibility in the O3 control strategies than a binary system of either NOx or VOC limited regime. The co-benefit of concurrent reduction of both NOx and VOCs in reducing column O3 production integrated in the planetary boundary layer is significant. Further research on the spatial extent of the transition regime over the polluted eastern China is critically important for controlling regional O3 pollution.« less

Modelling size-fractionated primary production in the Atlantic Ocean from remote sensing

NASA Astrophysics Data System (ADS)

Brewin, Robert J. W.; Tilstone, Gavin H.; Jackson, Thomas; Cain, Terry; Miller, Peter I.; Lange, Priscila K.; Misra, Ankita; Airs, Ruth L.

2017-11-01

Marine primary production influences the transfer of carbon dioxide between the ocean and atmosphere, and the availability of energy for the pelagic food web. Both the rate and the fate of organic carbon from primary production are dependent on phytoplankton size. A key aim of the Atlantic Meridional Transect (AMT) programme has been to quantify biological carbon cycling in the Atlantic Ocean and measurements of total primary production have been routinely made on AMT cruises, as well as additional measurements of size-fractionated primary production on some cruises. Measurements of total primary production collected on the AMT have been used to evaluate remote-sensing techniques capable of producing basin-scale estimates of primary production. Though models exist to estimate size-fractionated primary production from satellite data, these have not been well validated in the Atlantic Ocean, and have been parameterised using measurements of phytoplankton pigments rather than direct measurements of phytoplankton size structure. Here, we re-tune a remote-sensing primary production model to estimate production in three size fractions of phytoplankton (<2 μm, 2-10 μm and >10 μm) in the Atlantic Ocean, using measurements of size-fractionated chlorophyll and size-fractionated photosynthesis-irradiance experiments conducted on AMT 22 and 23 using sequential filtration-based methods. The performance of the remote-sensing technique was evaluated using: (i) independent estimates of size-fractionated primary production collected on a number of AMT cruises using 14C on-deck incubation experiments and (ii) Monte Carlo simulations. Considering uncertainty in the satellite inputs and model parameters, we estimate an average model error of between 0.27 and 0.63 for log10-transformed size-fractionated production, with lower errors for the small size class (<2 μm), higher errors for the larger size classes (2-10 μm and >10 μm), and errors generally higher in oligotrophic waters. Application to satellite data in 2007 suggests the contribution of cells <2 μm and >2 μm to total primary production is approximately equal in the Atlantic Ocean.

The economic viability of smallholder timber production under expanding açaí palm production in the Amazon Estuary

USGS Publications Warehouse

Fortini, Lucas B.; Douglas R. Carter,

2015-01-01

Relatively little attention has been paid to the economic potentials and limitations of tropical timber production and management at smallholder scales, with the most relevant research focusing on community forestry efforts. As a rare tropical example of long-lasting small-scale timber production, in this study we explore the economics of smallholder vertically integrated timber use to better understand the activity in the context of its primary land use alternative in the Amazon Estuary, açaí palm fruit production. We use data from landowner and firm surveys, participatory monitoring of firms, and detailed forest and sawmill operation monitoring to devise financial returns models of smallholder timber micro firms and açaí palm fruit production. We then compare the economics of the two activities to better understand how differences may shape decisions at the small holder scale that impact current land use shifts in the region.

[Review of estimation on oceanic primary productivity by using remote sensing methods.

PubMed

Xu, Hong Yun; Zhou, Wei Feng; Ji, Shi Jian

2016-09-01

Accuracy estimation of oceanic primary productivity is of great significance in the assessment and management of fisheries resources, marine ecology systems, global change and other fields. The traditional measurement and estimation of oceanic primary productivity has to rely on in situ sample data by vessels. Satellite remote sensing has advantages of providing dynamic and eco-environmental parameters of ocean surface at large scale in real time. Thus, satellite remote sensing has increasingly become an important means for oceanic primary productivity estimation on large spatio-temporal scale. Combining with the development of ocean color sensors, the models to estimate the oceanic primary productivity by satellite remote sensing have been developed that could be mainly summarized as chlorophyll-based, carbon-based and phytoplankton absorption-based approach. The flexibility and complexity of the three kinds of models were presented in the paper. On this basis, the current research status for global estimation of oceanic primary productivity was analyzed and evaluated. In view of these, four research fields needed to be strengthened in further stu-dy: 1) Global oceanic primary productivity estimation should be segmented and studied, 2) to dee-pen the research on absorption coefficient of phytoplankton, 3) to enhance the technology of ocea-nic remote sensing, 4) to improve the in situ measurement of primary productivity.

OMERACT Filter Evidence Supporting the Measurement of At-work Productivity Loss as an Outcome Measure in Rheumatology Research.

PubMed

Beaton, Dorcas E; Dyer, Sarah; Boonen, Annelies; Verstappen, Suzanne M M; Escorpizo, Reuben; Lacaille, Diane V; Bosworth, Ailsa; Gignac, Monique A M; Leong, Amye; Purcaru, Oana; Leggett, Sarah; Hofstetter, Cathy; Peterson, Ingemar F; Tang, Kenneth; Fautrel, Bruno; Bombardier, Claire; Tugwell, Peter S

2016-01-01

Indicators of work role functioning (being at work, and being productive while at work) are important outcomes for persons with arthritis. As the worker productivity working group at OMERACT (Outcome Measures in Rheumatology), we sought to provide an evidence base for consensus on standardized instruments to measure worker productivity [both absenteeism and at-work productivity (presenteeism) as well as critical contextual factors]. Literature reviews and primary studies were done and reported to the OMERACT 12 (2014) meeting to build the OMERACT Filter 2.0 evidence for worker productivity outcome measurement instruments. Contextual factor domains that could have an effect on scores on worker productivity instruments were identified by nominal group techniques, and strength of influence was further assessed by literature review. At OMERACT 9 (2008), we identified 6 candidate measures of absenteeism, which received 94% endorsement at the plenary vote. At OMERACT 11 (2012) we received over the required minimum vote of 70% for endorsement of 2 at-work productivity loss measures. During OMERACT 12 (2014), out of 4 measures of at-work productivity loss, 3 (1 global; 2 multiitem) received support as having passed the OMERACT Filter with over 70% of the plenary vote. In addition, 3 contextual factor domains received a 95% vote to explore their validity as core contextual factors: nature of work, work accommodation, and workplace support. Our current recommendations for at-work productivity loss measures are: WALS (Workplace Activity Limitations Scale), WLQ PDmod (Work Limitations Questionnaire with modified physical demands scale), WAI (Work Ability Index), WPS (Arthritis-specific Work Productivity Survey), and WPAI (Work Productivity and Activity Impairment Questionnaire). Our future research focus will shift to confirming core contextual factors to consider in the measurement of worker productivity.

Bibliographic processes and products, and a bibliography of the published primary-source works of B. F. Skinner

PubMed Central

Morris, Edward K.; Smith, Nathaniel G.

2003-01-01

This paper introduces the nature and practice of bibliography (e.g., definition, history, and genres); it reviews the extant B. F. Skinner bibliographies (1958 to 2001); and it describes the methods used in constructing a new, comprehensive, and corrected bibliography of Skinner's primary-source published works. The bibliography includes 291 items from across 16 categories of publications (e.g., books, articles, chapters, monographs, book reviews, manuals, encyclopedia entries, letters to the editor) and lists them in chronological order (1930 to 1999). A discussion section addresses the bibliography's limitations, how it might be enlarged and expanded, its value for qualitative and quantitative historical inquiry, and the beginnings of a “Skinner industry.” PMID:22478394

Primary production export flux in Marguerite Bay (Antarctic Peninsula): Linking upper water-column production to sediment trap flux

NASA Astrophysics Data System (ADS)

Weston, Keith; Jickells, Timothy D.; Carson, Damien S.; Clarke, Andrew; Meredith, Michael P.; Brandon, Mark A.; Wallace, Margaret I.; Ussher, Simon J.; Hendry, Katharine R.

2013-05-01

A study was carried out to assess primary production and associated export flux in the coastal waters of the western Antarctic Peninsula at an oceanographic time-series site. New, i.e., exportable, primary production in the upper water-column was estimated in two ways; by nutrient deficit measurements, and by primary production rate measurements using separate 14C-labelled radioisotope and 15N-labelled stable isotope uptake incubations. The resulting average annual exportable primary production estimates at the time-series site from nutrient deficit and primary production rates were 13 and 16 mol C m-2, respectively. Regenerated primary production was measured using 15N-labelled ammonium and urea uptake, and was low throughout the sampling period. The exportable primary production measurements were compared with sediment trap flux measurements from 2 locations; the time-series site and at a site 40 km away in deeper water. Results showed ˜1% of the upper mixed layer exportable primary production was exported to traps at 200 m depth at the time-series site (total water column depth 520 m). The maximum particle flux rate to sediment traps at the deeper offshore site (total water column depth 820 m) was lower than the flux at the coastal time-series site. Flux of particulate organic carbon was similar throughout the spring-summer high flux period for both sites. Remineralisation of particulate organic matter predominantly occurred in the upper water-column (<200 m depth), with minimal remineralisation below 200 m, at both sites. This highly productive region on the Western Antarctic Peninsula is therefore best characterised as 'high recycling, low export'.

Net primary productivity, allocation pattern and carbon use efficiency in an apple orchard assessed by integrating eddy covariance, biometric and continuous soil chamber measurements

NASA Astrophysics Data System (ADS)

Zanotelli, D.; Montagnani, L.; Manca, G.; Tagliavini, M.

2013-05-01

Carbon use efficiency (CUE), the ratio of net primary production (NPP) over gross primary production (GPP), is a functional parameter that could possibly link the current increasingly accurate global GPP estimates with those of net ecosystem exchange, for which global predictors are still unavailable. Nevertheless, CUE estimates are actually available for only a few ecosystem types, while information regarding agro-ecosystems is scarce, in spite of the simplified spatial structure of these ecosystems that facilitates studies on allocation patterns and temporal growth dynamics. We combined three largely deployed methods, eddy covariance, soil respiration and biometric measurements, to assess monthly values of CUE, NPP and allocation patterns in different plant organs in an apple orchard during a complete year (2010). We applied a measurement protocol optimized for quantifying monthly values of carbon fluxes in this ecosystem type, which allows for a cross check between estimates obtained from different methods. We also attributed NPP components to standing biomass increments, detritus cycle feeding and lateral exports. We found that in the apple orchard, both net ecosystem production and gross primary production on a yearly basis, 380 ± 30 g C m-2 and 1263 ± 189 g C m-2 respectively, were of a magnitude comparable to those of natural forests growing in similar climate conditions. The largest differences with respect to forests are in the allocation pattern and in the fate of produced biomass. The carbon sequestered from the atmosphere was largely allocated to production of fruit: 49% of annual NPP was taken away from the ecosystem through apple production. Organic material (leaves, fine root litter, pruned wood and early fruit falls) contributing to the detritus cycle was 46% of the NPP. Only 5% was attributable to standing biomass increment, while this NPP component is generally the largest in forests. The CUE, with an annual average of 0.71 ± 0.12, was higher than the previously suggested constant values of 0.47-0.50. Low nitrogen investment in fruit, the limited root apparatus, and the optimal growth temperature and nutritional condition observed at the site are suggested to be explanatory variables for the high CUE observed.

SeaWiFS Technical Report Series. Volume 42; Satellite Primary Productivity Data and Algorithm Development: A Science Plan for Mission to Planet Earth

NASA Technical Reports Server (NTRS)

Falkowski, Paul G.; Behrenfeld, Michael J.; Esaias, Wayne E.; Balch, William; Campbell, Janet W.; Iverson, Richard L.; Kiefer, Dale A.; Morel, Andre; Yoder, James A.; Hooker, Stanford B. (Editor);

Short-term to seasonal variability in factors driving primary productivity in a shallow estuary: Implications for modeling production

NASA Astrophysics Data System (ADS)

Canion, Andy; MacIntyre, Hugh L.; Phipps, Scott

2013-10-01

The inputs of primary productivity models may be highly variable on short timescales (hourly to daily) in turbid estuaries, but modeling of productivity in these environments is often implemented with data collected over longer timescales. Daily, seasonal, and spatial variability in primary productivity model parameters: chlorophyll a concentration (Chla), the downwelling light attenuation coefficient (kd), and photosynthesis-irradiance response parameters (Pmchl, αChl) were characterized in Weeks Bay, a nitrogen-impacted shallow estuary in the northern Gulf of Mexico. Variability in primary productivity model parameters in response to environmental forcing, nutrients, and microalgal taxonomic marker pigments were analysed in monthly and short-term datasets. Microalgal biomass (as Chla) was strongly related to total phosphorus concentration on seasonal scales. Hourly data support wind-driven resuspension as a major source of short-term variability in Chla and light attenuation (kd). The empirical relationship between areal primary productivity and a combined variable of biomass and light attenuation showed that variability in the photosynthesis-irradiance response contributed little to the overall variability in primary productivity, and Chla alone could account for 53-86% of the variability in primary productivity. Efforts to model productivity in similar shallow systems with highly variable microalgal biomass may benefit the most by investing resources in improving spatial and temporal resolution of chlorophyll a measurements before increasing the complexity of models used in productivity modeling.

Global resistance and resilience of primary production following extreme drought are predicted by mean annual precipitation

NASA Astrophysics Data System (ADS)

Stuart-Haëntjens, E. J.; De Boeck, H. J.; Lemoine, N. P.; Gough, C. M.; Kröel-Dulay, G.; Mänd, P.; Jentsch, A.; Schmidt, I. K.; Bahn, M.; Lloret, F.; Kreyling, J.; Wohlgemuth, T.; Stampfli, A.; Anderegg, W.; Classen, A. T.; Smith, M. D.

2017-12-01

Extreme drought is increasing globally in frequency and intensity, with uncertain consequences for the resistance and resilience of key ecosystem functions, including primary production. Primary production resistance, the capacity of an ecosystem to withstand change in primary production following extreme climate, and resilience, the degree to which primary production recovers, vary among and within ecosystem types, obscuring global patterns of resistance and resilience to extreme drought. Past syntheses on resistance have focused climatic gradients or individual ecosystem types, without assessing interactions between the two. Theory and many empirical studies suggest that forest production is more resistant but less resilient than grassland production to extreme drought, though some empirical studies reveal that these trends are not universal. Here, we conducted a global meta-analysis of sixty-four grassland and forest sites, finding that primary production resistance to extreme drought is predicted by a common continuum of mean annual precipitation (MAP). However, grasslands and forests exhibit divergent production resilience relationships with MAP. We discuss the likely mechanisms underlying the mixed production resistance and resilience patterns of forests and grasslands, including different plant species turnover times and drought adaptive strategies. These findings demonstrate the primary production responses of forests and grasslands to extreme drought are mixed, with far-reaching implications for Earth System Models, ecosystem management, and future studies of extreme drought resistance and resilience.

Extracting Hydrocarbon from Shale: An Investigation of the Factors That Influence the Decline and the Tail of the Production Curve

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lovell, A. E.; Srinivasan, S.; Karra, S.

Understanding physical processes that control the long-term production of hydrocarbon from shale formations is important for both predicting the yield and increasing it. In this work, we explore the processes that could control the tail of the production curve by using a discrete fracture network method to calculate the total travel time from the rock matrix to small-scale fractures to the primary hydraulic fracture network. The factors investigated include matrix diffusion, extent of the small-scale fracture zone (or tributary fracture zone/TFZ) consisting of natural, reactivated and induced fractures, and the percentage of free hydrocarbon in the primary fracture network. Individualmore » and combined parameter spaces are explored for each of these to understand the limits of these parameters as well as any systematic correlations between pairs of parameters. Although recent studies have shown that the matrix diffusion in virgin shale influences the production tail only after nearly 20 years, we demonstrate that matrix diffusion in the region of the TFZ significantly impacts production within the first year itself. Additionally, we found that the depth of TFZ fracturing region had no effect on the shape of the production curves although the total mass of the hydrocarbon produced increases with the depth. We also show that one can fit the production data using a site-specific set of parameters representing the diffusion in the TFZ, depth of the TFZ and the free hydrocarbon in the large-scale fractures.« less

Extracting Hydrocarbon from Shale: An Investigation of the Factors That Influence the Decline and the Tail of the Production Curve

DOE PAGES

Lovell, A. E.; Srinivasan, S.; Karra, S.; ...

2018-04-24

Understanding physical processes that control the long-term production of hydrocarbon from shale formations is important for both predicting the yield and increasing it. In this work, we explore the processes that could control the tail of the production curve by using a discrete fracture network method to calculate the total travel time from the rock matrix to small-scale fractures to the primary hydraulic fracture network. The factors investigated include matrix diffusion, extent of the small-scale fracture zone (or tributary fracture zone/TFZ) consisting of natural, reactivated and induced fractures, and the percentage of free hydrocarbon in the primary fracture network. Individualmore » and combined parameter spaces are explored for each of these to understand the limits of these parameters as well as any systematic correlations between pairs of parameters. Although recent studies have shown that the matrix diffusion in virgin shale influences the production tail only after nearly 20 years, we demonstrate that matrix diffusion in the region of the TFZ significantly impacts production within the first year itself. Additionally, we found that the depth of TFZ fracturing region had no effect on the shape of the production curves although the total mass of the hydrocarbon produced increases with the depth. We also show that one can fit the production data using a site-specific set of parameters representing the diffusion in the TFZ, depth of the TFZ and the free hydrocarbon in the large-scale fractures.« less

Secondary organic aerosol production from diesel vehicle exhaust: impact of aftertreatment, fuel chemistry and driving cycle

NASA Astrophysics Data System (ADS)

Gordon, T. D.; Presto, A. A.; Nguyen, N. T.; Robertson, W. H.; Na, K.; Sahay, K. N.; Zhang, M.; Maddox, C.; Rieger, P.; Chattopadhyay, S.; Maldonado, H.; Maricq, M. M.; Robinson, A. L.

2013-09-01

Environmental chamber ("smog chamber") experiments were conducted to investigate secondary organic aerosol (SOA) production from dilute emissions from two medium-duty diesel vehicles (MDDVs) and three heavy-duty diesel vehicles (HDDVs) under urban-like conditions. Some of the vehicles were equipped with emission control aftertreatment devices including diesel particulate filters (DPF), selective catalytic reduction (SCR) and diesel oxidation catalysts (DOC). Experiments were also performed with different fuels (100% biodiesel and low-, medium- or high-aromatic ultralow sulfur diesel) and driving cycles (Unified Cycle, Urban Dynamometer Driving Schedule, and creep+idle). During normal operation, vehicles with a catalyzed DPF emitted very little primary particulate matter (PM). Furthermore, photo-oxidation of dilute emissions from these vehicles produced essentially no SOA (below detection limit). However, significant primary PM emissions and SOA production were measured during active DPF regeneration experiments. Nevertheless, under reasonable assumptions about DPF regeneration frequency, the contribution of regeneration emissions to the total vehicle emissions is negligible, reducing PM trapping efficiency by less than 2%. Therefore, catalyzed DPFs appear to be very effective in reducing both primary and secondary fine particulate matter from diesel vehicles. For both MDDVs and HDDVs without aftertreatment substantial SOA formed in the smog chamber - with the emissions from some vehicles generating twice as much SOA as primary organic aerosol after three hours of oxidation at typical urban VOC : NOx ratios (3:1). Comprehensive organic gas speciation was performed on these emissions, but less than half of the measured SOA could be explained by traditional (speciated) SOA precursors. The remainder presumably originates from the large fraction (~30%) of the non-methane organic gas emissions that could not be speciated using traditional one-dimensional gas-chromatography. The unspeciated organics - likely comprising less volatile species, such as intermediate volatility organic compounds - appear to be important SOA precursors; we estimate that the effective SOA yield (defined as the ratio of SOA mass to reacted precursor mass) was 9 ± 6% if both speciated SOA precursors and unspeciated organics are included in the analysis. SOA production from creep+idle operation was 3-4 times larger than SOA production from the same vehicle operated over the Urban Dynamometer Driving Schedule (UDDS). Fuel properties had little or no effect on primary PM emissions or SOA formation.

Evolving Dispensers: How to Take Benefit from Heritage

NASA Astrophysics Data System (ADS)

Veilleraud, Fredderic; Larcher, Virginie

2014-06-01

Thanks to its large know-how in the field of accommodation and launch of multiple payloads on civil and military programs, Airbus Defence and Space has developed since 1996 dispensers for various constellations on various launchers.Taking into account time and cost constraints of this market, Airbus D&S early based its solutions on adaptation of previous products enabling to limit engineering and manufacturing effort. Thus, Airbus D&S has developed a family of prequalified technological elements allowing adaptation of design to requirement while limiting drastically qualification need.Doing that, Airbus Defence and Space has also gathered a strong experience on various primary concepts that could be easily tuned and customized to new customer needs.

Active cycling of organic carbon in the central Arctic Ocean

NASA Astrophysics Data System (ADS)

Wheeler, Patricia A.; Gosselin, Michel; Sherr, Evelyn; Thibaultc, Delphine; Kirchman, David L.; Benner, Ronald; Whitledge, Terry E.

1996-04-01

THE notion of a barren central Arctic Ocean has been accepted since English's pioneering work1 on drifting ice-islands. The year-round presence of ice, a short photosynthetic season and low temperatures were thought to severely limit biological production1,2, although the paucity of data was often noted. Because primary production appeared to be low1,2, subsequent studies assumed that most organic carbon was either derived from river inputs or imported from adjacent continental-shelf regions3,4. Here we present shipboard measurements of biological produc-tion, biomass and organic carbon standing-stocks made during a cruise through the ice covering the central Arctic Ocean. Our results indicate that the central Arctic region is not a biological desert. Although it is less productive than oligotrophic ocean regions not covered by ice, it supports an active biological community which contributes to the cycling of organic carbon through dissolved and particulate pools.

Serotonin Affects Movement Gain Control in the Spinal Cord

PubMed Central

Glaser, Joshua I.; Deng, Linna; Thompson, Christopher K.; Stevenson, Ian H.; Wang, Qining; Hornby, Thomas George; Heckman, Charles J.; Kording, Konrad P.

2014-01-01

A fundamental challenge for the nervous system is to encode signals spanning many orders of magnitude with neurons of limited bandwidth. To meet this challenge, perceptual systems use gain control. However, whether the motor system uses an analogous mechanism is essentially unknown. Neuromodulators, such as serotonin, are prime candidates for gain control signals during force production. Serotonergic neurons project diffusely to motor pools, and, therefore, force production by one muscle should change the gain of others. Here we present behavioral and pharmaceutical evidence that serotonin modulates the input–output gain of motoneurons in humans. By selectively changing the efficacy of serotonin with drugs, we systematically modulated the amplitude of spinal reflexes. More importantly, force production in different limbs interacts systematically, as predicted by a spinal gain control mechanism. Psychophysics and pharmacology suggest that the motor system adopts gain control mechanisms, and serotonin is a primary driver for their implementation in force production. PMID:25232107

Modeling the spatial and temporal variability in climate and primary productivity across the Luquillo Mountains, Puerto Rico.

Treesearch

Hongqing Wanga; Charles A.S. Halla; Frederick N. Scatenab; Ned Fetcherc; Wei Wua

2003-01-01

There are few studies that have examined the spatial variability of forest productivity over an entire tropical forested landscape. In this study, we used a spatially-explicit forest productivity model, TOPOPROD, which is based on the FORESTBGC model, to simulate spatial patterns of gross primary productivity (GPP), net primary productivity (NPP), and respiration over...

Wide variations in blood product transfusion practices among providers who care for patients with acute leukemia in the United States.

PubMed

Pine, Alexander B; Lee, Eun-Ju; Sekeres, Mikkael; Steensma, David P; Zelterman, Daniel; Prebet, Thomas; DeZern, Amy; Komrokji, Rami; Litzow, Mark; Luger, Selina; Stone, Richard; Erba, Harry P; Garcia-Manero, Guillermo; Lee, Alfred I; Podoltsev, Nikolai A; Barbarotta, Lisa; Kasberg, Stephanie; Hendrickson, Jeanne E; Gore, Steven D; Zeidan, Amer M

2017-02-01

Transfusion of blood products is a key component of the supportive management in patients with acute leukemia (AL). However high-quality trial evidence and clinical outcome data to support specific transfusion goals for blood products for patients with AL remain limited leading to diverse transfusion practices. The primary objective of this study was to determine the spectrum of transfusion patterns in a variety of care settings among providers who treat AL patients. A 31-question survey queried providers caring for AL patients about the existence of institutional guidelines for transfusion of blood products, transfusion triggers for hemoglobin (Hb), platelets (PLTs), and fibrinogen in various settings including inpatient and outpatient and before procedures. We analyzed 130 responses and identified divergent transfusion Hb goals in hospitalized and ambulatory patients, fibrinogen goals for cryoprecipitate transfusions, and variation in practice for use of certain PLTs and red blood cell products. The least variable transfusion patterns were reported for PLT goals in thrombocytopenia and in the setting of invasive procedures such as bone marrow biopsy and lumbar punctures. This survey confirmed wide variations in blood product transfusion practices across several clinical scenarios in patients with AL. The findings emphasized the need for large prospective randomized trials to develop standardized evidence-based guidelines for blood product transfusions in patients with AL with the goal of limiting unnecessary transfusions without compromising outcomes. © 2016 AABB.

Estimating the residency expansion required to avoid projected primary care physician shortages by 2035.

PubMed

Petterson, Stephen M; Liaw, Winston R; Tran, Carol; Bazemore, Andrew W

2015-03-01

The purpose of this study was to calculate the projected primary care physician shortage, determine the amount and composition of residency growth needed, and estimate the impact of retirement age and panel size changes. We used the 2010 National Ambulatory Medical Care Survey to calculate utilization of ambulatory primary care services and the US Census Bureau to project demographic changes. To determine the baseline number of primary care physicians and the number retiring at 66 years, we used the 2014 American Medical Association Masterfile. Using specialty board and American Osteopathic Association figures, we estimated the annual production of primary care residents. To calculate shortages, we subtracted the accumulated primary care physician production from the accumulated number of primary care physicians needed for each year from 2015 to 2035. More than 44,000 primary care physicians will be needed by 2035. Current primary care production rates will be unable to meet demand, resulting in a shortage in excess of 33,000 primary care physicians. Given current production, an additional 1,700 primary care residency slots will be necessary by 2035. A 10% reduction in the ratio of population per primary care physician would require more than 3,000 additional slots by 2035, whereas changing the expected retirement age from 66 years to 64 years would require more than 2,400 additional slots. To eliminate projected shortages in 2035, primary care residency production must increase by 21% compared with current production. Delivery models that shift toward smaller ratios of population to primary care physicians may substantially increase the shortage. © 2015 Annals of Family Medicine, Inc.

Biomass recycling and Earth’s early phosphorus cycle

PubMed Central

Kipp, Michael A.; Stüeken, Eva E.

2017-01-01

Phosphorus sets the pace of marine biological productivity on geological time scales. Recent estimates of Precambrian phosphorus levels suggest a severe deficit of this macronutrient, with the depletion attributed to scavenging by iron minerals. We propose that the size of the marine phosphorus reservoir was instead constrained by muted liberation of phosphorus during the remineralization of biomass. In the modern ocean, most biomass-bound phosphorus gets aerobically recycled; but a dearth of oxidizing power in Earth’s early oceans would have limited the stoichiometric capacity for remineralization, particularly during the Archean. The resulting low phosphorus concentrations would have substantially hampered primary productivity, contributing to the delayed rise of atmospheric oxygen. PMID:29202032

Global Modeling Study of the Bioavailable Atmospheric Iron Supply to the Global Ocean

NASA Astrophysics Data System (ADS)

Myriokefalitakis, S.; Krol, M. C.; van Noije, T.; Le Sager, P.

2017-12-01

Atmospheric deposition of trace constituents acts as a nutrient source to the open ocean and affect marine ecosystem. Dust is known as a major source of nutrients to the global ocean, but only a fraction of these nutrients is released in a bioavailable form that can be assimilated by the marine biota. Iron (Fe) is a key micronutrient that significantly modulates gross primary production in the High-Nutrient-Low-Chlorophyll (HNLC) oceans, where macronutrients like nitrate are abundant, but primary production is limited by Fe scarcity. The global atmospheric Fe cycle is here parameterized in the state-of-the-art global Earth System Model EC-Earth. The model takes into account the primary emissions of both insoluble and soluble Fe forms, associated with mineral dust and combustion aerosols. The impact of atmospheric acidity and organic ligands on mineral dissolution processes, is parameterized based on updated experimental and theoretical findings. Model results are also evaluated against available observations. Overall, the link between the labile Fe atmospheric deposition and atmospheric composition changes is here demonstrated and quantified. This work has been financed by the Marie-Curie H2020-MSCA-IF-2015 grant (ID 705652) ODEON (Online DEposition over OceaNs; modeling the effect of air pollution on ocean bio-geochemistry in an Earth System Model).

Biological responses of the marine diatom Chaetoceros socialis to changing environmental conditions: A laboratory experiment

PubMed Central

Roevros, Nathalie; Dehairs, Frank; Chou, Lei

2017-01-01

Diatoms constitute a major group of phytoplankton, accounting for ~20% of the world’s primary production. It has been shown that iron (Fe) can be the limiting factor for phytoplankton growth, in particular, in the HNLC (High Nutrient Low Chlorophyll) regions. Iron plays thus an essential role in governing the marine primary productivity and the efficiency of biological carbon pump. Oceanic systems are undergoing continuous modifications at varying rates and magnitudes as a result of changing climate. The objective of our research is to evaluate how changing environmental conditions (dust deposition, ocean warming and acidification) can affect marine Fe biogeochemistry and diatom growth. Laboratory culture experiments using a marine diatom Chaetoceros socialis were conducted at two temperatures (13°C and 18°C) and under two pCO2 (carbon dioxide partial pressure) (400 μatm and 800 μatm) conditions. The present study clearly highlights the effect of ocean acidification on enhancing the release of Fe upon dust deposition. Our results also confirm that being a potential source of Fe, dust provides in addition a readily utilizable source of macronutrients such as dissolved phosphate (PO4) and silicate (DSi). However, elevated atmospheric CO2 concentrations may also have an adverse impact on diatom growth, causing a decrease in cell size and possible further changes in phytoplankton composition. Meanwhile, ocean warming may lead to the reduction of diatom production and cell size, inducing poleward shifts in the biogeographic distribution of diatoms. The changing climate has thus a significant implication for ocean phytoplankton growth, cell size and primary productivity, phytoplankton distribution and community composition, and carbon (C), nitrogen (N), phosphorus (P), silicon (Si) and Fe biogeochemical cycles in various ways. PMID:29190826

Revegetation in China’s Loess Plateau is approaching sustainable water resource limits

NASA Astrophysics Data System (ADS)

Feng, Xiaoming; Fu, Bojie; Piao, Shilong; Wang, Shuai; Ciais, Philippe; Zeng, Zhenzhong; Lü, Yihe; Zeng, Yuan; Li, Yue; Jiang, Xiaohui; Wu, Bingfang

2016-11-01

Revegetation of degraded ecosystems provides opportunities for carbon sequestration and bioenergy production. However, vegetation expansion in water-limited areas creates potentially conflicting demands for water between the ecosystem and humans. Current understanding of these competing demands is still limited. Here, we study the semi-arid Loess Plateau in China, where the `Grain to Green’ large-scale revegetation programme has been in operation since 1999. As expected, we found that the new planting has caused both net primary productivity (NPP) and evapotranspiration (ET) to increase. Also the increase of ET has induced a significant (p < 0.001) decrease in the ratio of river runoff to annual precipitation across hydrological catchments. From currently revegetated areas and human water demand, we estimate a threshold of NPP of 400 +/- 5 g C m-2 yr-1 above which the population will suffer water shortages. NPP in this region is found to be already close to this limit. The threshold of NPP could change by -36% in the worst case of climate drying and high human withdrawals, to +43% in the best case. Our results develop a new conceptual framework to determine the critical carbon sequestration that is sustainable in terms of both ecological and socio-economic resource demands in a coupled anthropogenic-biological system.

A comparative gene expression analysis of iron-limited cultures of Chaetoceros socialis and Pseudo-nitzschia arenysensis using newly developed iron assays

NASA Astrophysics Data System (ADS)

Abdala, Z. M.; Powell, K.; Cronin, D.; Chappell, D.

2016-02-01

A comparative gene expression analysis of iron-limited cultures of Chaetoceros socialis and Pseudo-nitzschia arenysensisusing newly developed iron assays Zuzanna M. Abdala, Kimberly Powell, Dylan P. Cronin, P. Dreux Chappell Diatoms, accounting for about 40% of the primary production in marine ecosystems, play a vital role in the dynamics of marine systems. Iron availability is understood to be a driving factor controlling productivity of many marine phytoplankton, including diatoms, as it functions as a cofactor for many proteins including several involved with photosynthetic processes. Previous work examining transcriptomes of diatoms of the Thalassiosira genus grown in controlled laboratory settings has identified genes whose expression can be used as sensitive markers of iron status. Data mining publically available diatom transcriptome data for these genes enables development of additional iron status assays for environmentally-relevant diatoms. For the present study, gene expression analysis of iron-limited laboratory cultures of Chaetoceros socialis and Pseudo-nitzschia arenysensis grown in continuous light was done using quantitative reverse transcriptase polymerase chain reaction (qRT-PCR). C. socialis and P. arenysensis serve as comparative models for analyzing gene expression in iron limitation in different ecological community assemblages. These data may ultimately assist to illuminate the function of iron in photosynthetic activity in diatoms.

Chemical oceanography. Increasing anthropogenic nitrogen in the North Pacific Ocean.

PubMed

Kim, Il-Nam; Lee, Kitack; Gruber, Nicolas; Karl, David M; Bullister, John L; Yang, Simon; Kim, Tae-Wook

2014-11-28

The recent increase in anthropogenic emissions of reactive nitrogen from northeastern Asia and the subsequent enhanced deposition over the extensive regions of the North Pacific Ocean (NPO) have led to a detectable increase in the nitrate (N) concentration of the upper ocean. The rate of increase of excess N relative to phosphate (P) was found to be highest (~0.24 micromoles per kilogram per year) in the vicinity of the Asian source continent, with rates decreasing eastward across the NPO, consistent with the magnitude and distribution of atmospheric nitrogen deposition. This anthropogenically driven increase in the N content of the upper NPO may enhance primary production in this N-limited region, potentially leading to a long-term change of the NPO from being N-limited to P-limited. Copyright © 2014, American Association for the Advancement of Science.

Organic carbon fluxes in the Atlantic and the Southern Ocean: relationship to primary production compiled from satellite radiometer data

NASA Astrophysics Data System (ADS)

Fischer, G.; Ratmeyer, V.; Wefer, G.

Fluxes of organic carbon normalised to a depth of 1000 m from 18 sites in the Atlantic and the Southern Ocean are presented, comprising nine biogeochemical provinces as defined by Longhurst et al. (1995. Journal of Plankton Research 17, 1245-1271). For comparison with primary production, we used a recent compilation of primary production values derived from CZCS data (Antoine et al., 1996. Global Biogeochemical Cycles 10, 57-69). In most cases, the seasonal patterns stood reasonably well in accordance with the carbon fluxes. Particularly, organic carbon flux records from two coastal sites off northwest and southwest Africa displayed a more distinct correlation to the primary production in sectors (1×1°) which are situated closer to the coastal environments. This was primarily caused by large upwelling filaments streaming far offshore, resulting in a cross-shelf carbon transport. With respect to primary production, organic carbon export to a water depth of 1000 m, and the fraction of primary production exported to a depth of 1000 m (export fraction=EF 1000), we were able to distinguish between: (1) the coastal environments with highest values (EF 1000=1.75-2.0%), (2) the eastern equatorial upwelling area with moderately high values (EF 1000=0.8-1.1%), (3) and the subtropical oligotrophic gyres that yielded lowest values (EF 1000=0.6%). Carbon export in the Southern Ocean was low to moderate, and the EF 1000 value seems to be quite low in general. Annual organic carbon fluxes were proportional to primary production, and the export fraction EF 1000 increased with primary production up to 350 gC m -2 yr-1. Latitudinal variations in primary production were reflected in the carbon flux pattern. A high temporal variability of primary production rates and a pronounced seasonality of carbon export were observed in the polar environments, in particular in coastal domains, although primary production (according to Antoine et al., 1996. Global Biogeochemical Cycles 10, 57-69), carbon fluxes, and the export fraction remained at low.

Soil and vegetation parameter uncertainty on future terrestrial carbon sinks

NASA Astrophysics Data System (ADS)

Kothavala, Z.; Felzer, B. S.

2013-12-01

We examine the role of the terrestrial carbon cycle in a changing climate at the centennial scale using an intermediate complexity Earth system climate model that includes the effects of dynamic vegetation and the global carbon cycle. We present a series of ensemble simulations to evaluate the sensitivity of simulated terrestrial carbon sinks to three key model parameters: (a) The temperature dependence of soil carbon decomposition, (b) the upper temperature limits on the rate of photosynthesis, and (c) the nitrogen limitation of the maximum rate of carboxylation of Rubisco. We integrated the model in fully coupled mode for a 1200-year spin-up period, followed by a 300-year transient simulation starting at year 1800. Ensemble simulations were conducted varying each parameter individually and in combination with other variables. The results of the transient simulations show that terrestrial carbon uptake is very sensitive to the choice of model parameters. Changes in net primary productivity were most sensitive to the upper temperature limit on the rate of photosynthesis, which also had a dominant effect on overall land carbon trends; this is consistent with previous research that has shown the importance of climatic suppression of photosynthesis as a driver of carbon-climate feedbacks. Soil carbon generally decreased with increasing temperature, though the magnitude of this trend depends on both the net primary productivity changes and the temperature dependence of soil carbon decomposition. Vegetation carbon increased in some simulations, but this was not consistent across all configurations of model parameters. Comparing to global carbon budget observations, we identify the subset of model parameters which are consistent with observed carbon sinks; this serves to narrow considerably the future model projections of terrestrial carbon sink changes in comparison with the full model ensemble.

High Colonization Possibility of Some Species of Weeds in Suaeda salsa Community: From an Ecological Stoichiometry Perspective

PubMed Central

Ge, Changzi; Wang, Renqing; Chai, Yanchao; Wang, Haiqing; Kan, Manman; Liu, Jian

2017-01-01

Suaeda salsa community is a vegetation type in saline-alkali areas. Weed invasion and colonization in S. salsa communities lead to fragmentationsof S. salsa communities. The colonization of invaded weeds in S. salsa communities is related to community succession of saline-alkali zones. The fragmented S. salsa community may be restored if the mechanism of invaded weed colonization in S. salsa communities is clearly elucidated. Thus, we studied the ecological stoichiometric characteristics of soils and plants in a salt marsh to explain the high colonization possibility of invaded weeds in S. salsa communities. In October 2014, soils and plants were collected from Dongfeng Salt Marsh, Jiaozhou Bay, Shandong Province, China. The ratio of Ex-N/Ex-P in soil was less than 13, which suggests a relative nitrogen limitation for the primary production in the zone. The minimum phosphorus content in plants was higher than 1 mg g-1, whereas the maximum nitrogen content in plants was less than 13 mg g-1. These results imply that phosphorus was abundant, whereas nitrogen was deficient in the area. The plants in the salt marsh may be limited by nitrogen. Given the relatively lower nitrogen contents in Cyperus glomeratus, Echinochloa crusgalli, and Aster subulatus than that in S. salsa, these three species exhibited higher competitiveness than S. salsa did when nitrogen was limited in primary production. These weed species may colonize highly in S. salsa communities. Moreover, nitrogen fertilization might be effective to maintain S. salsa community in Dongfeng Salt Marsh, whereas its effects on controlling weeds colonization in S. salsa communities need more studies to verify. PMID:28135313

High Colonization Possibility of Some Species of Weeds in Suaeda salsa Community: From an Ecological Stoichiometry Perspective.

PubMed

Ge, Changzi; Wang, Renqing; Chai, Yanchao; Wang, Haiqing; Kan, Manman; Liu, Jian

2017-01-01

Suaeda salsa community is a vegetation type in saline-alkali areas. Weed invasion and colonization in S. salsa communities lead to fragmentationsof S. salsa communities. The colonization of invaded weeds in S. salsa communities is related to community succession of saline-alkali zones. The fragmented S. salsa community may be restored if the mechanism of invaded weed colonization in S. salsa communities is clearly elucidated. Thus, we studied the ecological stoichiometric characteristics of soils and plants in a salt marsh to explain the high colonization possibility of invaded weeds in S. salsa communities. In October 2014, soils and plants were collected from Dongfeng Salt Marsh, Jiaozhou Bay, Shandong Province, China. The ratio of Ex-N/Ex-P in soil was less than 13, which suggests a relative nitrogen limitation for the primary production in the zone. The minimum phosphorus content in plants was higher than 1 mg g-1, whereas the maximum nitrogen content in plants was less than 13 mg g-1. These results imply that phosphorus was abundant, whereas nitrogen was deficient in the area. The plants in the salt marsh may be limited by nitrogen. Given the relatively lower nitrogen contents in Cyperus glomeratus, Echinochloa crusgalli, and Aster subulatus than that in S. salsa, these three species exhibited higher competitiveness than S. salsa did when nitrogen was limited in primary production. These weed species may colonize highly in S. salsa communities. Moreover, nitrogen fertilization might be effective to maintain S. salsa community in Dongfeng Salt Marsh, whereas its effects on controlling weeds colonization in S. salsa communities need more studies to verify.

Hot Topics in Primary Care: Management of Opioid-induced Constipation.

PubMed

Johnson, David A; Argoff, Charles E

2015-12-01

Constipation is a common complication of opioid therapy that contributes to substantial patient morbidity, decreased productivity, and opioid nonadherence. Other causes of constipation may occur concomitantly and should be investigated. Although evidence supporting their use is limited, the use of fiber, water, laxatives, and/or exercise is recommended in current guidelines as initial management. Peripherally acting μ-opioid receptor antagonists are important treatment options, are well-tolerated, and improve many signs and symptoms of OIC in patients taking an opioid for chronic noncancer pain.

Methylmercury bioaccumulation in stream food webs declines with increasing primary production

USGS Publications Warehouse

Walters, David; D.F. Raikow,; C.R. Hammerschmidt,; M.G. Mehling,; A. Kovach,; J.T. Oris,

2015-01-01

Opposing hypotheses posit that increasing primary productivity should result in either greater or lesser contaminant accumulation in stream food webs. We conducted an experiment to evaluate primary productivity effects on MeHg accumulation in stream consumers. We varied light for 16 artificial streams creating a productivity gradient (oxygen production =0.048–0.71 mg O2 L–1 d–1) among streams. Two-level food webs were established consisting of phytoplankton/filter feeding clam, periphyton/grazing snail, and leaves/shredding amphipod (Hyalella azteca). Phytoplankton and periphyton biomass, along with MeHg removal from the water column, increased significantly with productivity, but MeHg concentrations in these primary producers declined. Methylmercury concentrations in clams and snails also declined with productivity, and consumer concentrations were strongly correlated with MeHg concentrations in primary producers. Heterotroph biomass on leaves, MeHg in leaves, and MeHg in Hyalella were unrelated to stream productivity. Our results support the hypothesis that contaminant bioaccumulation declines with stream primary production via the mechanism of bloom dilution (MeHg burden per cell decreases in algal blooms), extending patterns of contaminant accumulation documented in lakes to lotic systems.

Variability in primary productivity determines metapopulation dynamics.

PubMed

Fernández, Néstor; Román, Jacinto; Delibes, Miguel

2016-04-13

Temporal variability in primary productivity can change habitat quality for consumer species by affecting the energy levels available as food resources. However, it remains unclear how habitat-quality fluctuations may determine the dynamics of spatially structured populations, where the effects of habitat size, quality and isolation have been customarily assessed assuming static habitats. We present the first empirical evaluation on the effects of stochastic fluctuations in primary productivity--a major outcome of ecosystem functions--on the metapopulation dynamics of a primary consumer. A unique 13-year dataset from an herbivore rodent was used to test the hypothesis that inter-annual variations in primary productivity determine spatiotemporal habitat occupancy patterns and colonization and extinction processes. Inter-annual variability in productivity and in the growing season phenology significantly influenced habitat colonization patterns and occupancy dynamics. These effects lead to changes in connectivity to other potentially occupied habitat patches, which then feed back into occupancy dynamics. According to the results, the dynamics of primary productivity accounted for more than 50% of the variation in occupancy probability, depending on patch size and landscape configuration. Evidence connecting primary productivity dynamics and spatiotemporal population processes has broad implications for metapopulation persistence in fluctuating and changing environments. © 2016 The Authors.

Sources and fate of bioavailable dissolved organic nitrogen in the Neuse River Estuary, North Carolina

NASA Astrophysics Data System (ADS)

Paerl, H. W.; Peierls, B. L.; Hounshell, A.; Osburn, C. L.

2015-12-01

Eutrophication is a widespread problem affecting the structure and function of estuaries and is often linked to anthropogenic nitrogen (N) enrichment, since N is the primary nutrient limiting algal production. Watershed management actions typically have ignored dissolved organic nitrogen (DON) loading because of its perceived refractory nature and instead focused on inorganic N as targets for loading reductions. A fluorescence-based model indicated that anthropogenic sources of DON near the head of the microtidal Neuse River Estuary (NRE), NC were dominated by septic systems and poultry waste. A series of bioassays were used to determine the bioavailability of river DON and DON-rich sources to primary producers and whether those additions promoted the growth of certain phytoplankton taxa, particularly harmful species. Overall, at time scales up to two to three weeks, estuarine phytoplankton and bacteria only showed limited responses to additions of high molecular weight (HMW, >1 kDa) river DON. When increases in productivity and biomass did occur, they were quite small compared with the response to inorganic N. Low molecular weight (LMW) river DON, waste water treatment plant effluent, and poultry litter extract did have a positive effect on phytoplankton and bacterial production, indicating a bioavailable fraction. High variability of bulk DON concentration suggested that bioavailable compounds added in the experimental treatments were low in concentration and turned over quite rapidly. Some phytoplankton taxa, as measured by diagnostic photopigments, appeared to be selectively enhanced by the HMW and specific source DON additions, although the taxa could not be positively identified as harmful species. Preliminary tests show that labile autochthonous organic matter may act as a primer for the mineralization of the HMW DON. These and other, longer-term bioavailability studies will be needed to adequately address the fate of watershed DON in estuarine ecosystems.

Effects of oligotrophication on primary production in peri-alpine lakes

NASA Astrophysics Data System (ADS)

Finger, David; Wüest, Alfred; Bossard, Peter

2013-08-01

During the second half of the 20th century untreated sewage released from housing and industry into natural waters led to a degradation of many freshwater lakes and reservoirs worldwide. In order to mitigate eutrophication, wastewater treatment plants, including Fe-induced phosphorus precipitation, were implemented throughout the industrialized world, leading to reoligotrophication in many freshwater lakes. To understand and assess the effects of reoligotrophication on primary productivity, we analyzed 28 years of 14C assimilation rates, as well as other biotic and abiotic parameters, such as global radiation, nutrient concentrations and plankton densities in peri-alpine Lake Lucerne, Switzerland. Using a simple productivity-light relationship, we estimated continuous primary production and discussed the relation between productivity and observed limnological parameters. Furthermore, we assessed the uncertainty of our modeling approach based on monthly 14C assimilation measurements using Monte Carlo simulations. Results confirm that monthly sampling of productivity is sufficient for identifying long-term trends in productivity and that conservation management has successfully improved water quality during the past three decades via reducing nutrients and primary production in the lake. However, even though nutrient concentrations have remained constant in recent years, annual primary production varies significantly from year to year. Despite the fact that nutrient concentrations have decreased by more than an order of magnitude, primary production has decreased only slightly. These results suggest that primary production correlates well to nutrients availability but meteorological conditions lead to interannual variability regardless of the trophic status of the lake. Accordingly, in oligotrophic freshwaters meteorological forcing may reduce productivity impacting on the entire food chain of the ecosystem.

Under which climate and soil conditions the plant productivity-precipitation relationship is linear or nonlinear?

PubMed

Ye, Jian-Sheng; Pei, Jiu-Ying; Fang, Chao

2018-03-01

Understanding under which climate and soil conditions the plant productivity-precipitation relationship is linear or nonlinear is useful for accurately predicting the response of ecosystem function to global environmental change. Using long-term (2000-2016) net primary productivity (NPP)-precipitation datasets derived from satellite observations, we identify >5600pixels in the North Hemisphere landmass that fit either linear or nonlinear temporal NPP-precipitation relationships. Differences in climate (precipitation, radiation, ratio of actual to potential evapotranspiration, temperature) and soil factors (nitrogen, phosphorous, organic carbon, field capacity) between the linear and nonlinear types are evaluated. Our analysis shows that both linear and nonlinear types exhibit similar interannual precipitation variabilities and occurrences of extreme precipitation. Permutational multivariate analysis of variance suggests that linear and nonlinear types differ significantly regarding to radiation, ratio of actual to potential evapotranspiration, and soil factors. The nonlinear type possesses lower radiation and/or less soil nutrients than the linear type, thereby suggesting that nonlinear type features higher degree of limitation from resources other than precipitation. This study suggests several factors limiting the responses of plant productivity to changes in precipitation, thus causing nonlinear NPP-precipitation pattern. Precipitation manipulation and modeling experiments should combine with changes in other climate and soil factors to better predict the response of plant productivity under future climate. Copyright © 2017 Elsevier B.V. All rights reserved.

Biosimilars for Immune-Mediated Chronic Diseases in Primary Care: What a Practicing Physician Needs to Know.

PubMed

Feldman, Steven R; Bagel, Jerry; Namak, Shahla

2018-05-01

The introduction of biologics has revolutionized the treatment of immune-mediated diseases, but high cost and limited patient access remain hurdles, and some physicians are concerned that biosimilars are not similar enough. The purpose of this narrative review is to describe biosimilar safety, efficacy, nomenclature, extrapolation and interchangeability. In the United States, the Biologics Price Competition and Innovation Act created an abbreviated pathway for licensing of a biologic that is biosimilar to another licensed product (i.e., the reference product). This approval pathway differs from that of generic small-molecule drugs because biologics are too complex to be perfectly duplicated, and follows a process designed to demonstrate that any differences between the biosimilar and its reference product have no significant impact on safety and efficacy. The US approval process requires extensive analytical assessments, animal studies and clinical trials, assuring that biosimilar products provide clinical results similar to those of the reference product. Copyright © 2018 The Authors. Published by Elsevier Inc. All rights reserved.

Bioelectrochemical reduction of volatile fatty acids in anaerobic digestion effluent for the production of biofuels.

PubMed

Kondaveeti, Sanath; Min, Booki

2015-12-15

This study proves for the first time the feasibility of biofuel production from anaerobic digestion effluent via bioelectrochemical cell operation at various applied cell voltages (1.0, 1.5 and 2.0 V). An increase in cell voltage from 1 to 2 V resulted in more reduction current generation (-0.48 to -0.78 mA) at a lowered cathode potential (-0.45 to -0.84 mV vs Ag/AgCl). Various alcohols were produced depending on applied cell voltages, and the main products were butanol, ethanol, and propanol. Hydrogen and methane production were also observed in the headspace of the cell. A large amount of lactic acid was unexpectedly formed at all conditions, which might be the primary cause of the limited biofuel production. The addition of neutral red (NR) to the system could increase the cathodic reduction current, and thus more biofuels were produced with an enhanced alcohol formation compared to without a mediator. Copyright © 2015 Elsevier Ltd. All rights reserved.

Evaluating the potential for enzymatic acrylamide mitigation in a range of food products using an asparaginase from Aspergillus oryzae.

PubMed

Hendriksen, Hanne V; Kornbrust, Beate A; Østergaard, Peter R; Stringer, Mary A

2009-05-27

Asparaginase, an enzyme that hydrolyzes asparagine to aspartic acid, presents a potentially very effective means for reducing acrylamide formation in foods via removal of the precursor, asparagine, from the primary ingredients. An extracellular asparaginase amenable to industrial production was cloned and expressed in Aspergillus oryzae . This asparaginase was tested in a range of food products, including semisweet biscuits, ginger biscuits, crisp bread, French fries, and sliced potato chips. In dough-based applications, addition of asparaginase resulted in reduction of acrylamide content in the final products of 34-92%. Enzyme dose, dough resting time, and water content were identified as critical parameters. Treating French fries and sliced potato chips was more challenging as the solid nature of these whole-cut products limits enzyme-substrate contact. However, by treating potato pieces with asparaginase after blanching, the acrylamide levels in French fries could be lowered by 60-85% and that in potato chips by up to 60%.

Interannual Variation in Phytoplankton Class-specific Primary Production at a Global Scale

NASA Technical Reports Server (NTRS)

Rousseaux, Cecile; Gregg, Watson

2014-01-01

Phytoplankton is responsible for over half of the net primary production on earth. The knowledge on the contribution of various phytoplankton groups to the total primary production is still poorly understood. Data from satellite observations suggest that for upwelling regions, photosynthetic rates by microplankton is higher than that of nanoplankton but that when the spatial extent is considered, the production by nanoplankton is comparable or even larger than microplankton. Here, we used the NASA Ocean Biogeochemical Model (NOBM) combined with remote sensing data via assimilation to evaluate the contribution of 4 phytoplankton groups to the total primary production. Globally, diatoms were the group that contributed the most to the total phytoplankton production (approx. 50%) followed by coccolithophores and chlorophytes. Primary production by diatoms was highest in high latitude (>45 deg) and in major upwelling systems (Equatorial Pacific and Benguela system). We assessed the effects of climate variability on the class-specific primary production using global (i.e. Multivariate El Nino Index, MEI) and 'regional' climate indices (e.g. Southern Annular Mode (SAM), Pacific Decadal Oscillation (PDO) and North Atlantic Oscillation (NAO)). Most interannual variability occurred in the Equatorial Pacific and was associated with climate variability. These results provide a modeling and data assimilation perspective to phytoplankton partitioning of primary production and contribute to our understanding of the dynamics of the carbon cycle in the oceans at a global scale.

The relative importance of light and nutrient limitation of phytoplankton growth: A simple index of coastal ecosystem sensitivity to nutrient enrichment

USGS Publications Warehouse

Cloern, J.E.

1999-01-01

Anthropogenic nutrient enrichment of the coastal zone is now a well-established fact. However, there is still uncertainty about the mechanisms through which nutrient enrichment can disrupt biological communities and ecosystem processes in the coastal zone. For example, while some estuaries exhibit classic symptoms of acute eutrophication, including enhanced production of algal biomass, other nutrient-rich estuaries maintain low algal biomass and primary production. This implies that large differences exist among coastal ecosystems in the rates and patterns of nutrient assimilation and cycling. Part of this variability comes from differences among ecosystems in the other resource that can limit algal growth and production - the light energy required for photosynthesis. Complete understanding of the eutrophication process requires consideration of the interacting effects of light and nutrients, including the role of light availability as a regulator of the expression of eutrophication. A simple index of the relative strength of light and nutrient limitation of algal growth can be derived from models that describe growth rate as a function of these resources. This index can then be used as one diagnostic to classify the sensitivity of coastal ecosystems to the harmful effects of eutrophication. Here I illustrate the application of this diagnostic with light and nutrient measurements made in three California estuaries and two Dutch estuaries.

Productivity vs. training in primary care: analysis of hospitals and health centers in New York City.

PubMed

DeLia, Derek; Cantor, Joel C; Duck, Elaine

2002-01-01

This paper examines the indirect costs of primary care residency in terms of ambulatory care site productivity and the influence of graduate medical education (GME) subsidies on the employment of primary care residents. Using a sample of hospitals and health centers in New York City (NYC), we find that most facilities employ significantly more primary care residents relative to nonresident primary care physicians than would be dictated by cost-minimizing behavior in the production of primary care. We also find evidence that New York's GME subsidy encourages the "overemployment" of residents, while the Medicare GME subsidy does not. We conclude that the trade-off between productivity and teaching is more serious in primary care than in inpatient settings, and that facilities heavily involved in ambulatory care teaching will be at a competitive disadvantage if GME subsidies are not targeted specifically for primary care.

Do marine phytoplankton follow Bergmann's rule sensu lato?

PubMed

Sommer, Ulrich; Peter, Kalista H; Genitsaris, Savvas; Moustaka-Gouni, Maria

2017-05-01

Global warming has revitalized interest in the relationship between body size and temperature, proposed by Bergmann's rule 150 years ago, one of the oldest manifestations of a 'biogeography of traits'. We review biogeographic evidence, results from clonal cultures and recent micro- and mesocosm experiments with naturally mixed phytoplankton communities regarding the response of phytoplankton body size to temperature, either as a single factor or in combination with other factors such as grazing, nutrient limitation, and ocean acidification. Where possible, we also focus on the comparison between intraspecific size shifts and size shifts resulting from changes in species composition. Taken together, biogeographic evidence, community-level experiments and single-species experiments indicate that phytoplankton average cell sizes tend to become smaller in warmer waters, although temperature is not necessarily the proximate environmental factor driving size shifts. Indirect effects via nutrient supply and grazing are important and often dominate. In a substantial proportion of field studies, resource availability is seen as the only factor of relevance. Interspecific size effects are greater than intraspecific effects. Direct temperature effects tend to be exacerbated by indirect ones, if warming leads to intensified nutrient limitation or copepod grazing while ocean acidification tends to counteract the temperature effect on cell size in non-calcifying phytoplankton. We discuss the implications of the temperature-related size trends in a global-warming context, based on known functional traits associated with phytoplankton size. These are a higher affinity for nutrients of smaller cells, highest maximal growth rates of moderately small phytoplankton (ca. 10 2  µm 3 ), size-related sensitivities for different types of grazers, and impacts on sinking rates. For a phytoplankton community increasingly dominated by smaller algae we predict that: (i) a higher proportion of primary production will be respired within the microbial food web; (ii) a smaller share of primary production will be channeled to the classic phytoplankton - crustacean zooplankton - fish food chain, thus leading to decreased ecological efficiency from a fish-production point of view; (iii) a smaller share of primary production will be exported through sedimentation, thus leading to decreased efficiency of the biological carbon pump. © 2016 The Authors. Biological Reviews published by John Wiley & Sons Ltd on behalf of Cambridge Philosophical Society.

Describing the primary care system capacity for the prevention and management of non-communicable diseases in rural Vietnam.

PubMed

Van Minh, Hoang; Do, Young Kyung; Bautista, Mary Ann Cruz; Tuan Anh, Tran

2014-01-01

The primary care system in Vietnam has been shown to play a crucial role in disease prevention and health promotion. This study described the primary care system in a selected rural area in Vietnam in terms of its capacity for prevention and control of non-communicable diseases (NCDs). The study was conducted in 2011 in Dong Hy district, Thai Nguyen province-a rural community located in northern Vietnam. Mixed methods were used, including quantitative and qualitative and literature review approaches, to collect data on the current status of the six building blocks of the primary care system in Dong Hy district. Selected health workers and stakeholders in the selected healthcare facilities were surveyed. A description of Dong Hy district's primary care capacity for NCD prevention and control is reported. (i) Service delivery: The current practice in NCD prevention and treatment is mainly based on a single risk factor rather than a combination of cardiovascular disease risks. (ii) Governance: At the primary care level, multi-sectoral collaborations are limited, and there is insufficient integration of NCD preventive activities. (iii) Financing: A national budget for NCD prevention and control is lacking. The cost of treatment and medicines is high, whereas the health insurance scheme limits the list of available medicines and the reimbursement ceiling level. Health workers have low remuneration despite their important roles in NCD prevention. (iv) Human resources: The quantity and quality of health staff working at the primary care level, especially those in preventive medicine, are insufficient. (v) Information and research: The health information system in the district is weak, and there is no specific information system for collecting population-based NCD data. (vi) Medical products and technology: Not all essential equipment and medicines recommended by the WHO are always available at the commune health centre. The capacity of the primary care system in Vietnam is still inadequate to serve the NCD-related health needs of the population. There is an urgent need to improve the primary care capacity for NCD prevention and management in Vietnam. Copyright © 2013 John Wiley & Sons, Ltd.

Diagenetic controls on reservoir heterogeneity in St. Peter Sandstone, deep Michigan basin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barnes, D.A.; Turmelle, T.M.; Adam, R.

1989-03-01

The St. Peter Sandstone is a highly productive gas and condensate reservoir throughout the central part of the Michigan basin. Production occurs in several intervals: a laterally continuous zone at the top of the formation typified in the Woodville, Falmouth, and Rose City fields and less continuous intervals lower in the formation typified in the Ruwe Gulf zone of the Reed City field. Porosity is not limited to hydrocarbon productive zones, however. Diagenesis has dramatically modified primary mineralogy and textures in the formation. Dominant diagenetic components are quartz, dolomite, and clay authigenic cements, extensive chemical compaction, and pervasive mineral leaching.more » Their model for sandstone diagenesis is consistent throughout the basin. Variation in the significance of these diagenetic components is strongly templated by stratigraphically predictable facies variations within the St. Peter Sandstone.« less

Zoobenthic biomass limited by phytoplankton abundance: evidence from parallel changes in two long-term data series in the Wadden Sea

NASA Astrophysics Data System (ADS)

Beukema, J. J.; Cadée, G. C.; Dekker, R.

2002-10-01

We address the question of whether year-to-year variability in pelagic algal food supply can explain long-term variability in macrozoobenthic biomass in an estuarine area. Starting in the early 1970s, quantitative data were frequently collected in standardized ways in the western part of the Dutch Wadden Sea on (1) concentrations of phytoplankton species and chlorophyll (and rates of primary production) in the main tidal inlet (Marsdiep) and (2) numerical densities and biomass of macrozoobenthic animals (and growth rates in a few species) in a nearby extensive tidal-flat area (Balgzand). In both data series, the most distinctive feature was a sudden change that took place around 1980, viz. a rather sudden and persisting doubling of concentrations of chlorophyll and algal cells and of primary production rates, as well as of numerical densities and biomass of zoobenthos. From these parallel changes we hypothesise that algal food largely determines the abundance of zoobenthos in the Wadden Sea. The following observations substantiate this hypothesis: (1) the significant correlation between annual mean values of chlorophyll concentration and overall mean numerical density and biomass of zoobenthos (as estimated after an appropriate time lag), (2) the observed limitation of zoobenthic biomass doubling (after the doubling of food supply) to areas with already high biomass values (where food demand was high and food could therefore be in short supply), (3) the limitation of a strong response to changes in food supply to functional groups that are directly dependent on algal food, i.e. suspension and deposit feeders, as opposed to carnivores, (4) the significant correlation between annual growth rates in Macoma balthica and food supply in the growing season, particularly in areas close to the tidal inlet where food concentrations were monitored. Some other factors were identified that could decisively influence zoobenthic abundance locally and/or temporarily. Harsh environmental conditions will have limited zoobenthic biomass in extreme areas such as the upper part of the intertidal and areas exposed to strong currents and wave action. Severe winters temporarily reduced the abundance of several sensitive (southern) species, including most of the infaunal and epifaunal predators. Even stronger temporary and local reductions of zoobenthic biomass occurred as a consequence of fishery activities for such benthic species as cockles, mussels and lugworms. Recovery after temporary biomass reductions was generally rapid, but late-winter values of total-Balgzand zoobenthos biomass never exceeded an upper level of 45 g AFDW per m 2 probably set by maximal annual rates of primary production of between 400 and 500 g C per m 2.

A New Load Residual Threshold Definition for the Evaluation of Wind Tunnel Strain-Gage Balance Data

NASA Technical Reports Server (NTRS)

Ulbrich, N.; Volden, T.

2016-01-01

A new definition of a threshold for the detection of load residual outliers of wind tunnel strain-gage balance data was developed. The new threshold is defined as the product between the inverse of the absolute value of the primary gage sensitivity and an empirical limit of the electrical outputs of a strain{gage. The empirical limit of the outputs is either 2.5 microV/V for balance calibration or check load residuals. A reduced limit of 0.5 microV/V is recommended for the evaluation of differences between repeat load points because, by design, the calculation of these differences removes errors in the residuals that are associated with the regression analysis of the data itself. The definition of the new threshold and different methods for the determination of the primary gage sensitivity are discussed. In addition, calibration data of a six-component force balance and a five-component semi-span balance are used to illustrate the application of the proposed new threshold definition to different types of strain{gage balances. During the discussion of the force balance example it is also explained how the estimated maximum expected output of a balance gage can be used to better understand results of the application of the new threshold definition.

Effects of resource addition on recovery of production and plant functional composition in degraded semiarid grasslands.

PubMed

Chen, Qing; Hooper, David U; Li, Hui; Gong, Xiao Ying; Peng, Fei; Wang, Hong; Dittert, Klaus; Lin, Shan

2017-05-01

Degradation of semiarid ecosystems from overgrazing threatens a variety of ecosystem services. Rainfall and nitrogen commonly co-limit production in semiarid grassland ecosystems; however, few studies have reported how interactive effects of precipitation and nitrogen addition influence the recovery of grasslands degraded by overgrazing. We conducted a 6-year experiment manipulating precipitation (natural precipitation and simulated wet year precipitation) and nitrogen (0, 25 and 50 kg N ha -1 ) addition at two sites with different histories of livestock grazing (moderately and heavily grazed) in Inner Mongolian steppe. Our results suggest that recovery of plant community composition and recovery of production can be decoupled. Perennial grasses provide long-term stability of high-quality forage production in this system. Supplemental water combined with exclosures led, in the heavily grazed site, to the strongest recovery of perennial grasses, although widespread irrigation of rangeland is not a feasible management strategy in many semiarid and arid regions. N fertilization combined with exclosures, but without water addition, increased dominance of unpalatable annual species, which in turn retarded growth of perennial species and increased inter-annual variation in primary production at both sites. Alleviation of grazing pressure alone allowed recovery of desired perennial species via successional processes in the heavily grazed site. Our experiments suggest that recovery of primary production and desirable community composition are not necessarily correlated. The use of N fertilization for the management of overgrazed grassland needs careful and systematic evaluation, as it has potential to impede, rather than aid, recovery.

Human Appropriation of Net Primary Production - Can Earth Keep Up?

NASA Technical Reports Server (NTRS)

Imhoff, Marc L.

2006-01-01

The amount of Earth's vegetation or net primary production required to support human activities is powerful measure of aggregate human impacts on the biosphere. Biophysical models applied to consumption statistics were used to estimate the annual amount of net primary production in the form of elemental carbon required for food, fibre, and fuel-wood by the global population. The calculations were then compared to satellite-based estimates of Earth's average net primary production to produce a geographically explicit balance sheet of net primary production "supply" and "demand". Humans consume 20% of Earth's net primary production (11.5 petagrams carbon) annually and this percentage varies regionally from 6% (South America) to over 70% (Europe and Asia), and locally from near 0% (central Australia) to over 30,000% (New York City, USA). The uneven footprint of human consumption and related environmental impacts, indicate the degree to which human populations are vulnerable to climate change and suggest policy options for slowing future growth of NPP demand.

Creating a Holistic Extractables and Leachables (E&L) Program for Biotechnology Products.

PubMed

Li, Kim; Rogers, Gary; Nashed-Samuel, Yasser; Lee, Hans; Mire-Sluis, Anthony; Cherney, Barry; Forster, Ronald; Yeh, Ping; Markovic, Ingrid

2015-01-01

The risk mitigation of extractables and leachables presents significant challenges to regulators and drug manufacturers with respect to the development, as well as the lifecycle management, of drug products. A holistic program is proposed, using a science- and risk-based strategy for testing extractables and leachables from primary containers, drug delivery devices, and single-use systems for the manufacture of biotechnology products. The strategy adopts the principles and concepts from ICH Q9 and ICH Q8(R2). The strategy is phase-appropriate, progressing from extractables testing for material screening/selection/qualification through leachables testing of final products. The strategy is designed primarily to ensure patient safety and product quality of biotechnology products. The holistic program requires robust extraction studies using model solvents, with careful consideration of solvation effect, pH, ionic strength, temperature, and product-contact surface and duration. From a wide variety of process- and product-contact materials, such extraction studies have identified and quantified over 200 organic extractable compounds. The most commonly observed compounds were siloxanes, fatty acid amides, and methacrylates. Toxicology assessments were conducted on these compounds using risk-based decision analysis. Parenteral permitted daily exposure limits were derived, as appropriate, for the majority of these compounds. Analysis of the derived parenteral permitted daily exposure limits helped to establish action thresholds to target high-risk leachables in drug products on stability until expiry. Action thresholds serve to trigger quality investigations to determine potential product impact. The holistic program also evaluates the potential risk for immunogenicity. This approach for primary drug containers and delivery devices is also applicable to single-use systems when justified with a historical knowledge base and understanding of the manufacturing processes of biotechnology products. In the development of a drug product, careful consideration is given to impurities that may originate from manufacturing equipment, process components, and packaging materials. The majority of such impurities are common chemical additives used to improve the physicochemical properties of a wide range of plastic materials. Suppliers and drug manufacturers conduct studies to extract chemical additives from the plastic materials in order to screen and predict those that may leach into a drug product. In this context, the term extractables refers to a profile of extracted compounds observed in studies under harsh conditions. In contrast, the term leachables refers to those impurities that leach from the materials under real-use conditions and may be present in final drug products. The purpose of this article is to present a holistic approach that effectively minimizes the risk of leachables to patient safety and product quality. © PDA, Inc. 2015.

Predicting Species-Resolved Macronutrient Acquisition during Succession in a Model Phototrophic Biofilm Using an Integrated ‘Omics Approach

PubMed Central

Lindemann, Stephen R.; Mobberley, Jennifer M.; Cole, Jessica K.; Markillie, L. M.; Taylor, Ronald C.; Huang, Eric; Chrisler, William B.; Wiley, H. S.; Lipton, Mary S.; Nelson, William C.; Fredrickson, James K.; Romine, Margaret F.

2017-01-01

The principles governing acquisition and interspecies exchange of nutrients in microbial communities and how those exchanges impact community productivity are poorly understood. Here, we examine energy and macronutrient acquisition in unicyanobacterial consortia for which species-resolved genome information exists for all members, allowing us to use multi-omic approaches to predict species’ abilities to acquire resources and examine expression of resource-acquisition genes during succession. Metabolic reconstruction indicated that a majority of heterotrophic community members lacked the genes required to directly acquire the inorganic nutrients provided in culture medium, suggesting high metabolic interdependency. The sole primary producer in consortium UCC-O, cyanobacterium Phormidium sp. OSCR, displayed declining expression of energy harvest, carbon fixation, and nitrate and sulfate reduction proteins but sharply increasing phosphate transporter expression over 28 days. Most heterotrophic members likewise exhibited signs of phosphorus starvation during succession. Though similar in their responses to phosphorus limitation, heterotrophs displayed species-specific expression of nitrogen acquisition genes. These results suggest niche partitioning around nitrogen sources may structure the community when organisms directly compete for limited phosphate. Such niche complementarity around nitrogen sources may increase community diversity and productivity in phosphate-limited phototrophic communities. PMID:28659875

Utility involvement in cogeneration and small power production since PURPA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hallaron, S.A.

One of the objectives of PURPA was more efficient energy production through cogeneration and the use of renewable resources. Under PURPA regulations, cogeneration and small power-producing plants may file for qualifying status to receive benefits allowed by the National Energy Act. There has been a steady increase in the number of qualifying facilities (QFs) and some electric utilities have increased ownership of small power-producing facilities as well as electric purchases from QFs. QFs are not only exempt from federal and state utility regulations under PURPA, but they also may be eligible for an exemption from the provisions of the Fuelmore » Use Act of 1978 which prohibits or limits use of oil and natural gas in power plants and other major fuel-burning installations. To obtain QF status under PURPA, small power-producing facilities are limited to a capacity of 80 MW or less and must use some combination of biomass, waste, geothermal, or other renewable resource as the primary energy source. Cogenerators are not limited in size or fuel. The purchase of electricity from cogenerators and small power producers can be an attractive alternative for utilities in meeting future demands.« less

Combined effects of precipitation and nitrogen deposition on native and invasive winter annual production in California deserts.

PubMed

Rao, Leela E; Allen, Edith B

2010-04-01

Primary production in deserts is limited by soil moisture and N availability, and thus is likely to be influenced by both anthropogenic N deposition and precipitation regimes altered as a consequence of climate change. Invasive annual grasses are particularly responsive to increases in N and water availabilities, which may result in competition with native forb communities. Additionally, conditions favoring increased invasive grass production in arid and semi-arid regions can increase fire risk, negatively impacting woody vegetation that is not adapted to fire. We conducted a seeded garden experiment and a 5-year field fertilization experiment to investigate how winter annual production is altered by increasing N supply under a range of water availabilities. The greatest production of invasive grasses and native forbs in the garden experiment occurred under the highest soil N (inorganic N after fertilization = 2.99 g m(-2)) and highest watering regime, indicating these species are limited by both water and N. A classification and regression tree (CART) analysis on the multi-year field fertilization study showed that winter annual biomass was primarily limited by November-December precipitation. Biomass exceeded the threshold capable of carrying fire when inorganic soil N availability was at least 3.2 g m(-2) in piñon-juniper woodland. Due to water limitation in creosote bush scrub, biomass exceeded the fire threshold only under very wet conditions regardless of soil N status. The CART analyses also revealed that percent cover of invasive grasses and native forbs is primarily dependent on the timing and amount of precipitation and secondarily dependent on soil N and site-specific characteristics. In total, our results indicate that areas of high N deposition will be susceptible to grass invasion, particularly in wet years, potentially reducing native species cover and increasing the risk of fire.

Characterization of low phosphorus insensitive Mutants Reveals a Crosstalk between Low Phosphorus-Induced Determinate Root Development and the Activation of Genes Involved in the Adaptation of Arabidopsis to Phosphorus Deficiency1

PubMed Central

Sánchez-Calderón, Lenin; López-Bucio, José; Chacón-López, Alejandra; Gutiérrez-Ortega, Abel; Hernández-Abreu, Esmeralda; Herrera-Estrella, Luis

2006-01-01

Low phosphorus (P) availability is one of the most limiting factors for plant productivity in many natural and agricultural ecosystems. Plants display a wide range of adaptive responses to cope with low P stress, which generally serve to enhance P availability in the soil and to increase its uptake by roots. In Arabidopsis (Arabidopsis thaliana), primary root growth inhibition and increased lateral root formation have been reported to occur in response to P limitation. To gain knowledge of the genetic mechanisms that regulate root architectural responses to P availability, we designed a screen for identifying Arabidopsis mutants that fail to arrest primary root growth when grown under low P conditions. Eleven low phosphorus insensitive (lpi) mutants that define at least four different complementation groups involved in primary root growth responses to P availability were identified. The lpi mutants do not show the typical determinate developmental program induced by P stress in the primary root. Other root developmental aspects of the low P rescue system, including increased root hair elongation and anthocyanin accumulation, remained unaltered in lpi mutants. In addition to the insensitivity of primary root growth inhibition, when subjected to P deprivation, lpi mutants show a reduced induction in the expression of several genes involved in the P starvation rescue system (PHOSPHATE TRANSPORTER 1 and 2, PURPLE ACID PHOSPHATASE 1, ACID PHOSPHATASE 5, and INDUCED BY PHOSPHATE STARVATION 1). Our results provide genetic support for the role of P as an important signal for postembryonic root development and root meristem maintenance and show a crosstalk in developmental and biochemical responses to P deprivation. PMID:16443695

Regulation of aldosterone production by ion channels: From basal secretion to primary aldosteronism.

PubMed

Yang, Tingting; He, Min; Hu, Changlong

2018-03-01

Aldosterone is produced by zona glomerulosa (ZG) cells of the adrenal cortex and plays a key role in balancing water and electrolytes levels. Autonomous overproduction of aldosterone leads to primary aldosteronism (PA), which is the most common form of secondary endocrine hypertension. Recently, significant progress has been made towards understanding the genetic basis of PA, where increasing clinical evidence suggests that mutations in ion channels appear to be the major cause of aldosterone-producing adenomas. In this review, we focused on potassium and calcium channels that regulate aldosterone secretion, and their roles in the pathology of PA. Because potassium and calcium channels are differentially expressed in ZG cells in different species of mammals, the limitations of published studies are also discussed. Copyright © 2017 Elsevier B.V. All rights reserved.

Simultaneous determination of atropine and scopolamine in buckwheat and related products using modified QuEChERS and liquid chromatography tandem mass spectrometry.

PubMed

Chen, Hongping; Marín-Sáez, Jesús; Romero-González, Roberto; Garrido Frenich, Antonia

2017-03-01

A method was developed for the determination of atropine and scopolamine in buckwheat and related products. A modified QuEChERS (Quick, Easy, Cheap, Effective, Rugged and Safe) extraction procedure was evaluated. Dispersive solid phase extraction (d-SPE) was studied as clean-up step, using graphitized black carbon (GBC) and primary secondary amine (PSA). The extract was diluted with water (50:50, v/v) prior to chromatographic analysis. The method was validated and recoveries (except chia samples spiked at 10μg/kg) ranged from 75% to 92%. Intra and inter-day precision was lower than or equal to 17%. The limit of quantification of atropine and scopolamine was 0.4 and 2μg/kg, respectively. Eight types of samples (buckwheat, wheat, soy, buckwheat flour, buckwheat noodle, amaranth grain, chia seeds and peeled millet) were analyzed. Target compounds were not found above the detection limits of the method, but three transformation products of scopolamine (norscopine, hydroscopolamine and dihydroxyscopolamine) were putative identified in the tested samples using high resolution mass spectrometry (Exactive-Orbitrap). Copyright © 2016 Elsevier Ltd. All rights reserved.

Kinetic and spectroscopic studies of the [palladium(Ar-bian)]-catalyzed semi-hydrogenation of 4-octyne.

PubMed

Kluwer, Alexander M; Koblenz, Tehila S; Jonischkeit, Thorsten; Woelk, Klaus; Elsevier, Cornelis J

2005-11-09

The kinetics of the stereoselective semi-hydrogenation of 4-octyne in THF by the highly active catalyst [Pd{(m,m'-(CF(3))(2)C(6)H(3))-bian}(ma)] (2) (bian = bis(imino)acenaphthene; ma = maleic anhydride) has been investigated. The rate law under hydrogen-rich conditions is described by r = k[4-octyne](0.65)[Pd][H(2)], showing first order in palladium and dihydrogen and a broken order in substrate. Parahydrogen studies have shown that a pairwise transfer of hydrogen atoms occurs in the rate-limiting step. In agreement with recent theoretical results, the proposed mechanism consists of the consecutive steps: alkyne coordination, heterolytic dihydrogen activation (hydrogenolysis of one Pd-N bond), subsequent hydro-palladation of the alkyne, followed by addition of N-H to palladium, reductive coupling of vinyl and hydride and, finally, substitution of the product alkene by the alkyne substrate. Under hydrogen-limiting conditions, side reactions occur, that is, formation of catalytically inactive palladacycles by oxidative alkyne coupling. Furthermore, it has been shown that (Z)-oct-4-ene is the primary reaction product, from which the minor product (E)-oct-4-ene is formed by an H(2)-assisted, palladium-catalyzed isomerization reaction.

Transport and homeostasis of potassium and phosphate: limiting factors for sustainable crop production.

PubMed

Luan, Mingda; Tang, Ren-Jie; Tang, Yumei; Tian, Wang; Hou, Congong; Zhao, Fugeng; Lan, Wenzhi; Luan, Sheng

2017-06-01

Potassium (K) and phosphate (Pi) are both macronutrients essential for plant growth and crop production, but the unrenewable resources of phosphorus rock and potash have become limiting factors for food security. One critical measure to help solve this problem is to improve nutrient use efficiency (NUE) in plants by understanding and engineering genetic networks for ion uptake, translocation, and storage. Plants have evolved multiple systems to adapt to various nutrient conditions for growth and production. Within the NUE networks, transport proteins and their regulators are the primary players for maintaining nutrient homeostasis and could be utilized to engineer high NUE traits in crop plants. A large number of publications have detailed K+ and Pi transport proteins in plants over the past three decades. Meanwhile, the discovery and validation of their regulatory mechanisms are fast-track topics for research. Here, we provide an overview of K+ and Pi transport proteins and their regulatory mechanisms, which participate in the uptake, translocation, storage, and recycling of these nutrients in plants. © The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Safety Analysis of Soybean Processing for Advanced Life Support

NASA Technical Reports Server (NTRS)

Hentges, Dawn L.

1999-01-01

Soybeans (cv. Hoyt) is one of the crops planned for food production within the Advanced Life Support System Integration Testbed (ALSSIT), a proposed habitat simulation for long duration lunar/Mars missions. Soybeans may be processed into a variety of food products, including soymilk, tofu, and tempeh. Due to the closed environmental system and importance of crew health maintenance, food safety is a primary concern on long duration space missions. Identification of the food safety hazards and critical control points associated with the closed ALSSIT system is essential for the development of safe food processing techniques and equipment. A Hazard Analysis Critical Control Point (HACCP) model was developed to reflect proposed production and processing protocols for ALSSIT soybeans. Soybean processing was placed in the type III risk category. During the processing of ALSSIT-grown soybeans, critical control points were identified to control microbiological hazards, particularly mycotoxins, and chemical hazards from antinutrients. Critical limits were suggested at each CCP. Food safety recommendations regarding the hazards and risks associated with growing, harvesting, and processing soybeans; biomass management; and use of multifunctional equipment were made in consideration of the limitations and restraints of the closed ALSSIT.

Aboveground and belowground net primary production

Treesearch

Hal O. Liechty; Mark H. Eisenbies

2000-01-01

The relationship among net primary productivity (NPP), hydroperiod, and fertility in forested wetlands is poorly understood (Burke and others 1999), particularly with respect to belowground NPP (Megonigal and others 1997). Although some researchers have studied aboveground and belowground primary production in depressional, forested wetland systems, e.g., Day and...

50 CFR Table 1c to Part 679 - Product Tyoe Codes

Code of Federal Regulations, 2010 CFR

2010-10-01

..., heads, internal organs, pectoral girdles, or any other product that may be made from the same fish as the primary product. A Primary product.A product, such as fillets, made from each fish, with the...

Liquid chromatographic determination of chloramine-T and its primary degradation product, p-toluenesulfonamide, in water

USGS Publications Warehouse

Dawson, Verdel K.; Davis, Ruth A.

1997-01-01

N-sodium-N-chloro-rho-toluenesulfonamide (chloramine-T) effectively controls bacterial gill disease (BGD) in cultured fishes, BGD, a common disease of hatchery-reared salmonids, causes more fish losses than any other disease among these species. This study describes a liquid chromatographic (LC) method that is capable of direct, simultaneous analysis of chloramine-T and its primary degradation product, rho-toluenesulfonamide (rho-TSA), in water. The procedure involves reversed-phase (C-18) LC analysis with ion suppression, using 0.01 M phosphate buffer at pH 3. The mobile phase is phosphate buffer-acetonitrile (60 + 40) at 1 mL/min. Both chemicals can be detected with a UV spectrophotometer at 229 nm; the method is linear up to 40 mg, chloramine-T or rho-TSA/L. Mean recoveries were 96.4 +/- 6.1% for water samples fortified with 0.03 mg chloramine-T/L and 95.3 +/- 4.6% for water samples fortified with 0.005 mg rho-TSA/L. Limits of detection without sample enrichment for chloramine-T and rho-TSA are 0.01 mg/L and 0.001 mg/L, respectively.

Liquid chromatographic determination of chloramine-T and its primary degradation product, p-toluenesulfonamide, in water

USGS Publications Warehouse

Dawson, V.K.; Davis, R.A.

1997-01-01

N-sodium-N-chloro-rho-toluenesulfonamide (chloramine-T) effectively controls bacterial gill disease (BGD) in cultured fishes, BGD, a common disease of hatchery-reared salmonids, causes more fish losses than any other disease among these species, This study describes a liquid chromatographic (LC) method that is capable of direct, simultaneous analysis of chloramine-T and its primary degradation product, rho-toluenesulfonamide (rho-TSA), in water. The procedure involves reversed-phase (C-18) LC analysis with ion suppression, using 0.01 M phosphate buffer at pH 3. The mobile phase is phosphate buffer-acetonitrile (60 + 40) at 1 mL/min. Both chemicals can be detected with a UV spectrophotometer at 229 nm; the method is linear up to 40 mg, chloramine-T or rho-TSA/L. Mean recoveries were 96.4 +/- 6.1% for water samples fortified with 0.03 mg chloramine-T/L and 95.3 +/- 4.6% for water samples fortified with 0.005 mg rho-TSA/L. Limits of detection without sample enrichment for chloramine-T and rho-TSA are 0.01 mg/L and 0.001 mg/L, respectively.

Bird species migration ratio in East Asia, Australia, and surrounding islands.

PubMed

Kuo, Yiliang; Lin, Da-Li; Chuang, Fu-Man; Lee, Pei-Fen; Ding, Tzung-Su

2013-08-01

Bird migration and its relationship with the contemporary environment have attracted long-term discussion. We calculated the avian migration ratio (the proportion of breeding species that migrate) in the areas from 70°E to 180°E and examined its relationship with the annual ranges of ambient temperature, primary productivity (estimated by the Enhanced Vegetation Index), and precipitation, along with island isolation and elevational range. The avian migration ratio increased with increasing latitude in general but varied greatly between the two hemispheres. Additionally, it showed minimal differences between continents and islands. Our analyses revealed that the seasonality of ambient temperature, which represents the energy expenditure of birds, is the dominant factor in determining bird species migration. Seasonality in primary productivity and other environmental factors play an indirect or limited role in bird species migration. The lower avian migration ratio in the Southern Hemisphere can be attributed to its paleogeographical isolation, stable paleoclimate, and warm contemporary environment. Under current trends of global warming, our findings should lead to further studies of the impact of warming on bird migration.

Bird species migration ratio in East Asia, Australia, and surrounding islands

NASA Astrophysics Data System (ADS)

Kuo, Yiliang; Lin, Da-Li; Chuang, Fu-Man; Lee, Pei-Fen; Ding, Tzung-Su

2013-08-01

Bird migration and its relationship with the contemporary environment have attracted long-term discussion. We calculated the avian migration ratio (the proportion of breeding species that migrate) in the areas from 70°E to 180°E and examined its relationship with the annual ranges of ambient temperature, primary productivity (estimated by the Enhanced Vegetation Index), and precipitation, along with island isolation and elevational range. The avian migration ratio increased with increasing latitude in general but varied greatly between the two hemispheres. Additionally, it showed minimal differences between continents and islands. Our analyses revealed that the seasonality of ambient temperature, which represents the energy expenditure of birds, is the dominant factor in determining bird species migration. Seasonality in primary productivity and other environmental factors play an indirect or limited role in bird species migration. The lower avian migration ratio in the Southern Hemisphere can be attributed to its paleogeographical isolation, stable paleoclimate, and warm contemporary environment. Under current trends of global warming, our findings should lead to further studies of the impact of warming on bird migration.

Periphyton indicate effects of wastewater discharge in the near-coastal zone, Perth (Western Australia)

NASA Astrophysics Data System (ADS)

Cosgrove, Jeffrey; Walker, Di; Morrison, Peter; Hillman, Karen

2004-10-01

Periphyton communities on artificial substrata were successfully utilised as a biological indicator of the potential eutrophic effects of wastewater discharge into coastal waters off Perth, Western Australia. Biomass and percentage carbonate content measurements of periphyton communities grown in situ indicated that the periphyton primary production (organic weight) was enhanced in the vicinity of the discharge outlets, with a significant negative correlation between distance north of the northern outlet in Whitfords Lagoon and periphyton organic weight (OW) observed in autumn at a depth of 4 m ( r = -0.704, P < 0.001). However, this response was primarily limited to the relatively calm autumn season and substrata at depths of 2 m and 4 m. Thus, in favourable conditions phytoplankton and high relief reef communities are more likely to exhibit a eutrophic influence (in the form of enhanced primary production) of the treated wastewater discharge. Laboratory studies confirmed that treated wastewater, diluted 100-fold to estimate surface concentrations above the wastewater outfalls in the field, stimulates periphyton growth above levels recorded in unpolluted seawater ( F = 12.485; P = 0.0073).

Evaluation of dairy powder products implicates thermophilic sporeformers as the primary organisms of interest.

PubMed

Watterson, M J; Kent, D J; Boor, K J; Wiedmann, M; Martin, N H

2014-01-01

Dairy powder products (e.g., sweet whey, nonfat dry milk, acid whey, and whey protein concentrate-80) are of economic interest to the dairy industry. According to the US Dairy Export Council, customers have set strict tolerances (<500 to <1,000/g) for thermophilic and mesophilic spores in dairy powders; therefore, understanding proliferation and survival of sporeforming organisms within dairy powder processing plants is necessary to control and reduce sporeformer counts. Raw, work-in-process, and finished product samples were collected from 4 dairy powder processing facilities in the northeastern United States over a 1-yr period. Two separate spore treatments: (1) 80°C for 12min (to detect sporeformers) and (2) 100°C for 30min (to detect highly heat resistant sporeformers) were applied to samples before microbiological analyses. Raw material, work-in-process, and finished product samples were analyzed for thermophilic, mesophilic, and psychrotolerant sporeformers, with 77.5, 71.0, and 4.6% of samples being positive for those organisms, respectively. Work-in-process and finished product samples were also analyzed for highly heat resistant thermophilic and mesophilic sporeformers, with 63.7 and 42.6% of samples being positive, respectively. Sporeformer prevalence and counts varied considerably by product and plant; sweet whey and nonfat dry milk showed a higher prevalence of thermophilic and mesophilic sporeformers compared with acid whey and whey protein concentrate-80. Unlike previous reports, we found limited evidence for increased spore counts toward the end of processing runs. Our data provide important insight into spore contamination patterns associated with production of different types of dairy powders and support that thermophilic sporeformers are the primary organism of concern in dairy powders. Copyright © 2014 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

Environmental controls on chemoautotrophic primary producers at deep-sea vents

NASA Astrophysics Data System (ADS)

Le Bris, Nadine; Mullineaux, Lauren; Sievert, Stefan

2014-05-01

High biomasses and fast growth rates of dominant chemosynthetic species characterize hydrothermal ecosystems, raising the issue of their contribution to energy transfer and carbon cycling in the deep-sea. Addressing this issue, however, needs to account for the temporal instability of hydrothermal systems, both, in terms of biological colonization and habitat conditions. Volcanic eruptions on mid-ocean ridges offer the opportunity to investigate the environmental conditions favoring the successive modes of chemoautotrophic primary production (i.e. free living microbes and symbiotic invertebrates). In that perspective, habitat-scale approaches distinguish from vent field-scale approaches based on fluid composition and provide relevant information on environmental constraints exerted at different stages of colonization focusing on parameters linked with physiological limits and available energy. Investigation of habitat physicochemical properties along a typical successional sequence of recolonization at 9°50'N EPR diffuse-flow vents, between 2006 and 2014, was performed in order to examine potential changes in environmental features associated with chemoautotrophic primary producers, from early microbial colonizers to symbiotic invertebrates. Combined in situ measurements of temperature, pH and hydrogen sulfide were used and their variability documented over a series of assemblages characterizing recolonization stages. The distributions of mature assemblages of dominant invertebrate species associate with substantial differences in habitat conditions, pointing to a strong influence of habitat properties on potential productivity. Among the differences observed, however, the amplitude and rate of environmental fluctuation appear more important than average conditions in the succession, highlighting the role of spatial heterogeneity and temporal dynamics as a control on primary producers. Invertebrate species acting as engineer species are expected to play a primary role in the rate of organic carbon formed over the lifetime of a vent and potentially transferred to adjacent ecosystems.

Prediction, scenarios and insight: The uses of an end-to-end model

NASA Astrophysics Data System (ADS)

Steele, John H.

2012-09-01

A major function of ecosystem models is to provide extrapolations from observed data in terms of predictions or scenarios or insight. These models can be at various levels of taxonomic resolution such as total community production, abundance of functional groups, or species composition, depending on the data input as drivers. A 40-year dynamic simulation of end-to-end processes in the Georges Bank food web is used to illustrate the input/output relations and the insights gained at the three levels of food web aggregation. The focus is on the intermediate level and the longer term changes in three functional fish guilds - planktivores, benthivores and piscivores - in terms of three ecosystem-based metrics - nutrient input, relative productivity of plankton and benthos, and food intake by juvenile fish. These simulations can describe the long term constraints imposed on guild structure and productivity by energy fluxes over the 40 years but cannot explain concurrent switches in abundance of individual species within guilds. Comparing time series data for individual species with model output provides insights; but including the data in the model would confer only limited extra information. The advantages and limitations of the three levels of resolution of models in relation to ecosystem-based management are: The correlations between primary production and total yield of fish imply a “bottom-up” constraint on end-to-end energy flow through the food web that can provide predictions of such yields. Functionally defined metrics such as nutrient input, relative productivity of plankton and benthos and food intake by juvenile fish, represent bottom-up, mid-level and top-down forcing of the food web. Model scenarios using these metrics can demonstrate constraints on the productivity of these functionally defined guilds within the limits set by (1). Comparisons of guild simulations with time series of fish species provide insight into the switches in species dominance that accompany changes in guild productivity and can illuminate the top-down aspects of regime shifts.

Basin-scale estimates of oceanic primary production by remote sensing - The North Atlantic

NASA Technical Reports Server (NTRS)

Platt, Trevor; Caverhill, Carla; Sathyendranath, Shubha

1991-01-01

The monthly averaged CZCS data for 1979 are used to estimate annual primary production at ocean basin scales in the North Atlantic. The principal supplementary data used were 873 vertical profiles of chlorophyll and 248 sets of parameters derived from photosynthesis-light experiments. Four different procedures were tested for calculation of primary production. The spectral model with nonuniform biomass was considered as the benchmark for comparison against the other three models. The less complete models gave results that differed by as much as 50 percent from the benchmark. Vertically uniform models tended to underestimate primary production by about 20 percent compared to the nonuniform models. At horizontal scale, the differences between spectral and nonspectral models were negligible. The linear correlation between biomass and estimated production was poor outside the tropics, suggesting caution against the indiscriminate use of biomass as a proxy variable for primary production.

Terrestrial, benthic, and pelagic resource use in lakes: Results from a three-isotope Bayesian mixing model

USGS Publications Warehouse

Solomon, C.T.; Carpenter, S.R.; Clayton, M.K.; Cole, J.J.; Coloso, J.J.; Pace, M.L.; Vander Zanden, M. J.; Weidel, B.C.

2011-01-01

Fluxes of organic matter across habitat boundaries are common in food webs. These fluxes may strongly influence community dynamics, depending on the extent to which they are used by consumers. Yet understanding of basal resource use by consumers is limited, because describing trophic pathways in complex food webs is difficult. We quantified resource use for zooplankton, zoobenthos, and fishes in four low-productivity lakes, using a Bayesian mixing model and measurements of hydrogen, carbon, and nitrogen stable isotope ratios. Multiple sources of uncertainty were explicitly incorporated into the model. As a result, posterior estimates of resource use were often broad distributions; nevertheless, clear patterns were evident. Zooplankton relied on terrestrial and pelagic primary production, while zoobenthos and fishes relied on terrestrial and benthic primary production. Across all consumer groups terrestrial reliance tended to be higher, and benthic reliance lower, in lakes where light penetration was low due to inputs of terrestrial dissolved organic carbon. These results support and refine an emerging consensus that terrestrial and benthic support of lake food webs can be substantial, and they imply that changes in the relative availability of basal resources drive the strength of cross-habitat trophic connections. ?? 2011 by the Ecological Society of America.

Atmospheric deposition, CO2, and change in the land carbon sink.

PubMed

Fernández-Martínez, M; Vicca, S; Janssens, I A; Ciais, P; Obersteiner, M; Bartrons, M; Sardans, J; Verger, A; Canadell, J G; Chevallier, F; Wang, X; Bernhofer, C; Curtis, P S; Gianelle, D; Grünwald, T; Heinesch, B; Ibrom, A; Knohl, A; Laurila, T; Law, B E; Limousin, J M; Longdoz, B; Loustau, D; Mammarella, I; Matteucci, G; Monson, R K; Montagnani, L; Moors, E J; Munger, J W; Papale, D; Piao, S L; Peñuelas, J

2017-08-29

Concentrations of atmospheric carbon dioxide (CO 2 ) have continued to increase whereas atmospheric deposition of sulphur and nitrogen has declined in Europe and the USA during recent decades. Using time series of flux observations from 23 forests distributed throughout Europe and the USA, and generalised mixed models, we found that forest-level net ecosystem production and gross primary production have increased by 1% annually from 1995 to 2011. Statistical models indicated that increasing atmospheric CO 2 was the most important factor driving the increasing strength of carbon sinks in these forests. We also found that the reduction of sulphur deposition in Europe and the USA lead to higher recovery in ecosystem respiration than in gross primary production, thus limiting the increase of carbon sequestration. By contrast, trends in climate and nitrogen deposition did not significantly contribute to changing carbon fluxes during the studied period. Our findings support the hypothesis of a general CO 2 -fertilization effect on vegetation growth and suggest that, so far unknown, sulphur deposition plays a significant role in the carbon balance of forests in industrialized regions. Our results show the need to include the effects of changing atmospheric composition, beyond CO 2 , to assess future dynamics of carbon-climate feedbacks not currently considered in earth system/climate modelling.

Metal Dissipation and Inefficient Recycling Intensify Climate Forcing.

PubMed

Ciacci, Luca; Harper, E M; Nassar, N T; Reck, Barbara K; Graedel, T E

2016-10-07

In the metals industry, recycling is commonly included among the most viable options for climate change mitigation, because using secondary (recycled) instead of primary sources in metal production carries both the potential for significant energy savings and for greenhouse gas emissions reduction. Secondary metal production is, however, limited by the relative quantity of scrap available at end-of-life for two reasons: long product lifespans during use delay the availability of the material for reuse and recycling; and end-of-life recycling rates are low, a result of inefficient collection, separation, and processing. For a few metals, additional losses exist in the form of in-use dissipation. The sum of these lost material flows forms the theoretical maximum potential for future efficiency improvements. Based on a dynamic material flow analysis, we have evaluated these factors from an energy perspective for 50 metals and calculated the corresponding greenhouse gas emissions associated with the supply of lost material from primary sources that would otherwise be used to satisfy demand. A use-by-use examination demonstrates the potential emission gains associated with major application sectors. The results show that minimizing in-use dissipation and constraints to metal recycling have the potential to reduce greenhouse gas emissions from the metal industry by about 13-23%, corresponding to 1% of global anthropogenic greenhouse gas emissions.

Potential Increasing Dominance of Heterotrophy in the Global Ocean

NASA Astrophysics Data System (ADS)

Kvale, K.; Meissner, K. J.; Keller, D. P.

2016-02-01

Autotrophs are largely limited by resources in the modern ocean. However, standard metabolic theory suggests continued ocean warming could globally benefit heterotrophs, thereby reducing autotrophic nutrient limitation. The paleo record as well as modern observations offer evidence this has happened in the past and could happen again. Increasing dominance of heterotrophs would result in strong nutrient recycling in the upper ocean and high rates of net primary production (NPP), yet low carbon export to the deep ocean and sediments. We describe the transition towards such a state in the early 22nd century as a response to business-as-usual Representative Concentration Pathway forcing (RCP8.5) in an intermediate complexity Earth system model in three configurations: with and without an explicit calcifier phytoplankton class and calcite ballast model. In all models nutrient regeneration in the near surface becomes an increasingly important driver of primary production. The near-linear relationship between changes in NPP and global sea surface temperature (SST) found over the 21st century becomes exponential above a 2-4 °C global mean SST change. This transition to a more heterotrophic ocean agrees roughly with metabolic theory. Inclusion of small phytoplankton and calcifiers increase the model NPP:SST sensitivity because of their relatively higher nutrient affinity than general phytoplankton. Accounting for organic carbon "protected" from remineralization by carbonate ballast mitigates the exponential increase in NPP and provides an increasingly important pathway for deep carbon export with higher SST changes, despite simultaneous increasing carbonate dissolution rates due to ocean acidification.

Climate-driven reduction in soil loss due to the dynamic role of vegetation

NASA Astrophysics Data System (ADS)

Constantine, J. A.; Ciampalini, R.; Walker-Springett, K.; Hales, T. C.; Ormerod, S.; Gabet, E. J.; Hall, I. R.

2016-12-01

Simulations of 21st century climate change predict increases in seasonal precipitation that may lead to widespread soil loss and reduced soil carbon stores by increasing the likelihood of surface runoff. Vegetation may counteract this increase through its dynamic response to climate change, possibly mitigating any impact on soil erosion. Here, we document for the first time the potential for vegetation to prevent widespread soil loss by surface-runoff mechanisms (i.e., rill and inter-rill erosion) by implementing a process-based soil erosion model across catchments of Great Britain with varying land-cover, topographic, and soil characteristics. Our model results reveal that, even under a significantly wetter climate, warmer air temperatures can limit soil erosion across areas with permanent vegetation cover because of its role in enhancing primary productivity, which improves leaf interception, soil infiltration-capacity, and the erosive resistance of soil. Consequently, any increase in air temperature associated with climate change will increase the threshold change in rainfall required to accelerate soil loss, and rates of soil erosion could therefore decline by up to 50% from 2070-2099 compared to baseline values under the IPCC-defined medium-emissions scenario SRES A1B. We conclude that enhanced primary productivity due to climate change can introduce a negative-feedback mechanism that limits soil loss by surface runoff as vegetation-induced impacts on soil hydrology and erodibility offset precipitation increases, highlighting the need to expand areas of permanent vegetation cover to reduce the potential for climate-driven soil loss.

Vegetation, plant biomass, and net primary productivity patterns in the Canadian Arctic

NASA Astrophysics Data System (ADS)

Gould, W. A.; Raynolds, M.; Walker, D. A.

2003-01-01

We have developed maps of dominant vegetation types, plant functional types, percent vegetation cover, aboveground plant biomass, and above and belowground annual net primary productivity for Canada north of the northern limit of trees. The area mapped covers 2.5 million km2 including glaciers. Ice-free land covers 2.3 million km2 and represents 42% of all ice-free land in the Circumpolar Arctic. The maps combine information on climate, soils, geology, hydrology, remotely sensed vegetation classifications, previous vegetation studies, and regional expertise to define polygons drawn using photo-interpretation of a 1:4,000,000 scale advanced very high resolution radiometer (AVHRR) color infrared image basemap. Polygons are linked to vegetation description, associated properties, and descriptive literature through a series of lookup tables in a graphic information systems (GIS) database developed as a component of the Circumpolar Arctic Vegetation Map (CAVM) project. Polygons are classified into 20 landcover types including 17 vegetation types. Half of the region is sparsely vegetated (<50% vegetation cover), primarily in the High Arctic (bioclimatic subzones A-C). Whereas most (86%) of the estimated aboveground plant biomass (1.5 × 1015 g) and 87% of the estimated above and belowground annual net primary productivity (2.28 × 1014 g yr-1) are concentrated in the Low Arctic (subzones D and E). The maps present more explicit spatial patterns of vegetation and ecosystem attributes than have been previously available, the GIS database is useful in summarizing ecosystem properties and can be easily updated and integrated into circumpolar mapping efforts, and the derived estimates fall within the range of current published estimates.

Iron Uptake in a Shelf Sea: Seasonality and Stoichiometry

NASA Astrophysics Data System (ADS)

Daniels, C. J.; Poulton, A. J.; Moore, M. M.; Birchill, A.; Mayers, K.; Lohan, M. C.

2016-02-01

Primary production by phytoplankton in shelf seas represents a significant contribution to global carbon cycling. Trace metals, such as Iron (Fe), are essential micronutrients for phytoplankton growth, and may ultimately limit primary production. The uptake of iron within natural phytoplankton communities is poorly understood. Using carrier free 55Fe, we are able to obtain novel estimates of biological uptake of Fe using trace level Fe additions that do not perturb the system. Here we present results from a study measuring the uptake of carrier free Iron (55Fe), in parallel with measurements of Carbon (14C) and Phosphorus (33P) uptake; samples were collected from the Celtic sea in spring (April 2015) and summer (July 2015), on-shelf and off-shelf, and in 2 size fractions (Total, >2µm), thus producing a novel dataset of the seasonality of macronutrient and micronutrient uptake by phytoplankton within a shelf sea. Primary production ranged from 1.0 - 2.2 mmol C m-3 d-1 in April and 0.2 - 1.5 mmol C m-3 d-1 in July, with a corresponding higher biomass in April (0.7 - 3.24 mg Chl m-3) than July (0.3 - 1.6 mg Chl m-3). Significant rates of Fe uptake were measured in all samples (e.g. 21 nmol m-3 d-1, on-shelf, April), with variable stoichiometry (e.g. Fe/C of 16 µmol/mol, and Fe/P of 0.4 mmol/mol, on-shelf, April). The results will be presented and examined in the context of the available nutrient pools, the phytoplankton community structure and the impact on biogeochemical cycling.

Dissolved organic carbon concentration controls benthic primary production: results from in situ chambers in north-temperate lakes

USGS Publications Warehouse

Godwin, Sean C.; Jones, Stuart E.; Weidel, Brian C.; Solomon, Christopher T.

2014-01-01

We evaluated several potential drivers of primary production by benthic algae (periphyton) in north-temperate lakes. We used continuous dissolved oxygen measurements from in situ benthic chambers to quantify primary production by periphyton at multiple depths across 11 lakes encompassing a broad range of dissolved organic carbon (DOC) and total phosphorous (TP) concentrations. Light-use efficiency (primary production per unit incident light) was inversely related to average light availability (% of surface light) in 7 of the 11 study lakes, indicating that benthic algal assemblages exhibit photoadaptation, likely through physiological or compositional changes. DOC alone explained 86% of the variability in log-transformed whole-lake benthic production rates. TP was not an important driver of benthic production via its effects on nutrient and light availability. This result is contrary to studies in other systems, but may be common in relatively pristine north-temperate lakes. Our simple empirical model may allow for the prediction of whole-lake benthic primary production from easily obtained measurements of DOC concentration.

Characterization of available light for seagrass and patch reef productivity in Sugarloaf Key, Lower Florida Keys

USGS Publications Warehouse

Toro-Farmer, Gerardo; Muller-Karger, Frank E.; Vega-Rodriguez, Maria; Melo, Nelson; Yates, Kimberly K.; Johns, Elizabeth; Cerdeira-Estrada, Sergio; Herwitz, Stan R.

2016-01-01

Light availability is an important factor driving primary productivity in benthic ecosystems, but in situ and remote sensing measurements of light quality are limited for coral reefs and seagrass beds. We evaluated the productivity responses of a patch reef and a seagrass site in the Lower Florida Keys to ambient light availability and spectral quality. In situ optical properties were characterized utilizing moored and water column bio-optical and hydrographic measurements. Net ecosystem productivity (NEP) was also estimated for these study sites using benthic productivity chambers. Our results show higher spectral light attenuation and absorption, and lower irradiance during low tide in the patch reef, tracking the influx of materials from shallower coastal areas. In contrast, the intrusion of clearer surface Atlantic Ocean water caused lower values of spectral attenuation and absorption, and higher irradiance in the patch reef during high tide. Storms during the studied period, with winds >10 m·s−1, caused higher spectral attenuation values. A spatial gradient of NEP was observed, from high productivity in the shallow seagrass area, to lower productivity in deeper patch reefs. The highest daytime NEP was observed in the seagrass, with values of almost 0.4 g·O2·m−2·h−1. Productivity at the patch reef area was lower in May than during October 2012 (mean = 0.137 and 0.177 g·O2·m−2·h−1, respectively). Higher photosynthetic active radiation (PAR) levels measured above water and lower light attenuation in the red region of the visible spectrum (~666 to ~699 nm) had a positive correlation with NEP. Our results indicate that changes in light availability and quality by suspended or resuspended particles limit benthic productivity in the Florida Keys.

Variability in primary productivity determines metapopulation dynamics

PubMed Central

2016-01-01

Temporal variability in primary productivity can change habitat quality for consumer species by affecting the energy levels available as food resources. However, it remains unclear how habitat-quality fluctuations may determine the dynamics of spatially structured populations, where the effects of habitat size, quality and isolation have been customarily assessed assuming static habitats. We present the first empirical evaluation on the effects of stochastic fluctuations in primary productivity—a major outcome of ecosystem functions—on the metapopulation dynamics of a primary consumer. A unique 13-year dataset from an herbivore rodent was used to test the hypothesis that inter-annual variations in primary productivity determine spatiotemporal habitat occupancy patterns and colonization and extinction processes. Inter-annual variability in productivity and in the growing season phenology significantly influenced habitat colonization patterns and occupancy dynamics. These effects lead to changes in connectivity to other potentially occupied habitat patches, which then feed back into occupancy dynamics. According to the results, the dynamics of primary productivity accounted for more than 50% of the variation in occupancy probability, depending on patch size and landscape configuration. Evidence connecting primary productivity dynamics and spatiotemporal population processes has broad implications for metapopulation persistence in fluctuating and changing environments. PMID:27053739

Systematic review of the evidence on the effectiveness of sexual and reproductive health interventions in humanitarian crises.

PubMed

Warren, Emily; Post, Nathan; Hossain, Mazeda; Blanchet, Karl; Roberts, Bayard

2015-12-18

This systematic review aims to evaluate evidence on the effectiveness of sexual and reproductive health (SRH) interventions delivered in humanitarian crises. Crisis affected low-income or middle-income countries. Crisis-affected populations in low-income or middle-income countries. Peer-reviewed and grey literature sources were systematically searched for relevant papers detailing interventions from 1 January 1980 until the search date on 30 April 2013. Data from included studies were then extracted, and the papers' quality evaluated using criteria based on modified STROBE and CONSORT checklists. Primary outcomes include, but are not limited to, changes in morbidity, mortality, sexually transmitted infection (STI) diagnosis or gender-based violence. Secondary outcomes include, but are not limited to, reported condom use or skilled attendance at birth. Primary outputs include, but are not limited to, condoms distributed or education courses taught. Of 7149 returned citations, 15 studies met the inclusion criteria. Only one randomised controlled trial was identified. The remaining observational studies were of moderate quality, demonstrating limited use of controls and inadequate attempts to address bias. Evidence of effectiveness was available for the following interventions: impregnated bed nets for pregnant women, subsidised refugee healthcare, female community health workers, and tiered community reproductive health services. The limited evidence base for SRH interventions highlights the need for improved research on the effectiveness of public health interventions in humanitarian crises. While interventions proven efficacious in stable settings are being used in humanitarian efforts, more evidence is required to demonstrate the effectiveness of delivering and scaling-up such interventions in humanitarian crises. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/

Protection from feed-forward amplification in an amplified RNAi mechanism

PubMed Central

Pak, Julia; Maniar, Jay Mahesh; Mello, Cecilia Cabral; Fire, Andrew

2012-01-01

SUMMARY The effectiveness of RNA interference (RNAi) in many organisms is potentiated through the signal-amplifying activity of a targeted RNA directed RNA polymerase (RdRP) system that can convert a small population of exogenously-encountered dsRNA fragments into an abundant internal pool of small interfering RNA (siRNA). As for any biological amplification system, we expect an underlying architecture that will limit the ability of a randomly encountered trigger to produce an uncontrolled and self-escalating response. Investigating such limits in C. elegans, we find that feed-forward amplification is limited by a critical biosynthetic and structural distinction at the RNA level between (i) triggers that can produce amplification and (ii) siRNA products of the amplification reaction. By assuring that initial (primary) siRNAs can act as triggers but not templates for activation, and that the resulting (secondary) siRNAs can enforce gene silencing on additional targets without unbridled trigger amplification, the system achieves substantial but fundamentally limited signal amplification. PMID:23141544

Relating seasonal patterns of the AVHRR vegetation index to simulated photosynthesis and transpiration of forests in different climates

NASA Technical Reports Server (NTRS)

Running, Steven W.; Nemani, Ramakrishna R.

1988-01-01

Weekly AVHRR Normalized Difference Vegetation Index (NDVI) values for 1983-1984 for seven sites of diverse climate in North America were correlated with results of an ecosystem simulation model of a hypothetical forest stand for the corresponding period at each site. The tendency of raw NDVI data to overpredict photosynthesis and transpiration on water limited sites was shown to be partially corrected by using an aridity index of annual radiation/annual precipitation. The results suggest that estimates of vegetation productivity using the global vegetation index are only accurate as annual integrations, unless unsubsampled local area coverage NDVI data can be tested against forest photosynthesis, transpiration and aboveground net primary production data measured at shorter time intervals.

Measurement of neutrino flux from the primary proton-proton fusion process in the Sun with Borexino detector

NASA Astrophysics Data System (ADS)

Smirnov, O. Yu.; Agostini, M.; Appel, S.; Bellini, G.; Benziger, J.; Bick, D.; Bonfini, G.; Bravo, D.; Caccianiga, B.; Calaprice, F.; Caminata, A.; Cavalcante, P.; Chepurnov, A.; Choi, K.; D'Angelo, D.; Davini, S.; Derbin, A.; Di Noto, L.; Drachnev, I.; Empl, A.; Etenko, A.; Fomenko, K.; Franco, D.; Gabriele, F.; Galbiati, C.; Ghiano, C.; Giammarchi, M.; Goeger-Neff, M.; Goretti, A.; Gromov, M.; Hagner, C.; Hungerford, E.; Ianni, Aldo; Ianni, Andrea; Jedrzejczak, K.; Kaiser, M.; Kobychev, V.; Korablev, D.; Korga, G.; Kryn, D.; Laubenstein, M.; Lehnert, B.; Litvinovich, E.; Lombardi, F.; Lombardi, P.; Ludhova, L.; Lukyanchenko, G.; Machulin, I.; Manecki, S.; Maneschg, W.; Marcocci, S.; Meroni, E.; Meyer, M.; Miramonti, L.; Misiaszek, M.; Mosteiro, P.; Muratova, V.; Neumair, B.; Oberauer, L.; Obolensky, M.; Ortica, F.; Otis, K.; Pagani, L.; Pallavicini, M.; Papp, L.; Perasso, L.; Pocar, A.; Ranucci, G.; Razeto, A.; Re, A.; Romani, A.; Roncin, R.; Rossi, N.; Schönert, S.; Semenov, D.; Simgen, H.; Skorokhvatov, M.; Sotnikov, A.; Sukhotin, S.; Suvorov, Y.; Tartaglia, R.; Testera, G.; Thurn, J.; Toropova, M.; Unzhakov, E.; Vogelaar, R. B.; von Feilitzsch, F.; Wang, H.; Weinz, S.; Winter, J.; Wojcik, M.; Wurm, M.; Yokley, Z.; Zaimidoroga, O.; Zavatarelli, S.; Zuber, K.; Zuzel, G.

2016-11-01

Neutrino produced in a chain of nuclear reactions in the Sun starting from the fusion of two protons, for the first time has been detected in a real-time detector in spectrometric mode. The unique properties of the Borexino detector provided an oppurtunity to disentangle pp-neutrino spectrum from the background components. A comparison of the total neutrino flux from the Sun with Solar luminosity in photons provides a test of the stability of the Sun on the 105 years time scale, and sets a strong limit on the power production in the unknown energy sources in the Sun of no more than 4% of the total energy production at 90% C.L.

H2 production with anaerobic sludge using activated-carbon supported packed-bed bioreactors.

PubMed

Lee, Kuo-Shing; Lo, Yung-Sheng; Lo, Yung-Chung; Lin, Ping-Jei; Chang, Jo-Shu

2003-01-01

Packed-bed bioreactors containing activated carbon as support carrier were used to produce H2 anaerobically from a sucrose-limiting medium while acclimated sewage sludge was used as the H2 producer. The effects of bed porosity (epsilon(b)) and substrate loading rate on H2 fermentation were examined using packed beds with epsilon(b) of 70-90% being operated at hydraulic retention times (HRT) of 0.5-4 h. Higher epsilon(b) and lower HRT favored H2 production. With 20 g COD l(-1) of sucrose in the feed, the optimal H2 production rate (7.4 l h(-1) l(-1)) was obtained when the bed with epsilon(b) = 90% was operated at HRT = 0.5 h. Flocculation of cells enhanced the retention of sludge for stable operations of the bioreactor at low HRTs. The gas products resulting from fermentative H2 production consisted of 30-40% H2 and 60-70% CO2. Butyric acid was the primary soluble product, followed by propionic acid and valeric acid.

Exploring the control of land-atmospheric oscillations over terrestrial vegetation productivity

NASA Astrophysics Data System (ADS)

Depoorter, Mathieu; Green, Julia; Gentine, Pierre; Liu, Yi; van Eck, Christel; Regnier, Pierre; Dorigo, Wouter; Verhoest, Niko; Miralles, Diego

2015-04-01

Vegetation dynamics play an important role in the climate system due to their control on the carbon, energy and water cycles. The spatiotemporal variability of vegetation is regulated by internal climate variability as well as natural and anthropogenic forcing mechanisms, including fires, land use, volcano eruptions or greenhouse gas emissions. Ocean-atmospheric oscillations, affect the fluxes of heat and water over continents, leading to anomalies in radiation, precipitation or temperature at widely separated locations (i.e. teleconnections); an effect of ocean-atmospheric oscillations on terrestrial primary productivity can therefore be expected. While different studies have shown the general importance of internal climate variability for global vegetation dynamics, the control by particular teleconnections over the regional growth and decay of vegetation is still poorly understood. At continental to global scales, satellite remote sensing offers a feasible approach to enhance our understanding of the main drivers of vegetation variability. Traditional studies of the multi-decadal variability of global vegetation have been usually based on the normalized difference vegetation index (NDVI) derived from the Advanced Very High Resolution Radiometer (AVHRR), which extends back to the early '80s. There are, however, some limitations to NDVI observations; arguably the most important of these limitations is that from the plant physiology perspective the index does not have a well-defined meaning, appearing poorly correlated to vegetation productivity. On the other hand, recently developed records from other remotely-sensed properties of vegetation, like fluorescence or microwave vegetation optical depth, have proven a significantly better correspondence to above-ground biomass. To enhance our understanding of the controls of ocean-atmosphere oscillations over vegetation, we propose to explore the link between climate oscillation extremes and net primary productivity over the last two decades. The co-variability of a range of climate oscillation indices and newly-derived records of fluorescence and vegetation optical depth is analyzed using a statistical framework based on correlations, bootstrapping and Empirical Orthogonal Functions (EOFs). Results will enable us to characterize regional hotspots where particular climatic oscillations control vegetation productivity, as well as allowing us to underpin the climatic variables behind this control.

Seasonal distribution of net primary production by functional groups in Chihuahuan Desert, and the role of seasonal precipitation

USDA-ARS?s Scientific Manuscript database

In hot deserts, precipitation is the principal driver for net primary production.  This study tested two hypotheses regarding aboveground net primary production (ANPP) and the effects of precipitation on ANPP in the Chihuahuan Desert, with emphasis on differences among seasons and among functional g...

A review of ocean chlorophyll algorithms and primary production models

NASA Astrophysics Data System (ADS)

Li, Jingwen; Zhou, Song; Lv, Nan

2015-12-01

This paper mainly introduces the five ocean chlorophyll concentration inversion algorithm and 3 main models for computing ocean primary production based on ocean chlorophyll concentration. Through the comparison of five ocean chlorophyll inversion algorithm, sums up the advantages and disadvantages of these algorithm,and briefly analyzes the trend of ocean primary production model.

26 CFR 1.993-3 - Definition of export property.

Code of Federal Regulations, 2012 CFR

2012-04-01

... deduction for depletion under section 613 or 613A. (3) Primary product from oil, gas, coal, or uranium. A primary product from oil, gas, coal, or uranium is not export property. For purposes of this paragraph— (i... primary products from oil, gas, coal, or uranium described in subdivisions (i) through (iv) of this...

26 CFR 1.993-3 - Definition of export property.

Code of Federal Regulations, 2014 CFR

2014-04-01

... deduction for depletion under section 613 or 613A. (3) Primary product from oil, gas, coal, or uranium. A primary product from oil, gas, coal, or uranium is not export property. For purposes of this paragraph— (i... primary products from oil, gas, coal, or uranium described in subdivisions (i) through (iv) of this...

26 CFR 1.993-3 - Definition of export property.

Code of Federal Regulations, 2013 CFR

2013-04-01

... deduction for depletion under section 613 or 613A. (3) Primary product from oil, gas, coal, or uranium. A primary product from oil, gas, coal, or uranium is not export property. For purposes of this paragraph— (i... primary products from oil, gas, coal, or uranium described in subdivisions (i) through (iv) of this...

Combined elevated temperature and soil waterlogging stresses inhibit cell elongation by altering osmolyte composition of the developing cotton (Gossypium hirsutum L.) fiber.

PubMed

Chen, Yinglong; Wang, Haimiao; Hu, Wei; Wang, Shanshan; Wang, Youhua; Snider, John L; Zhou, Zhiguo

2017-03-01

Soil waterlogging events and high temperature conditions occur frequently in the Yangtze River Valley, yet the effects of these co-occurring stresses on fiber elongation have received little attention. In the current study, the combined effect of elevated temperature (ET) and soil waterlogging (SW) more negatively affected final fiber length (reduced by 5.4%-11.3%) than either stress alone by altering the composition of osmotically active solutes (sucrose, malate, and K + ), where SW had the most pronounced effect. High temperature accelerated early fiber development, but limited the duration of elongation, thereby limiting final fiber length. Treatment of ET alone altered fiber sucrose content mainly through decreased source strength and the expression of the sucrose transporter gene GhSUT-1, making sucrose availability the primary determinant of final fiber length under ET. Waterlogging stress alone decreased source strength, down-regulated GhSUT-1 expression and enhanced SuSy catalytic activity for sucrose reduction. Waterlogging treatment alone also limited fiber malate production by down-regulating GhPEPC-1 & -2. However, combined elevated temperature and waterlogging limited primary cell wall synthesis by affecting GhCESAs genes and showed a negative impact on all three major osmotic solutes through the regulation of GhSUT-1, GhPEPC-1 & -2 and GhKT-1 expression and altered SuSy activity, which functioned together to produce a shorter fiber length. Copyright © 2017 Elsevier B.V. All rights reserved.

[Simultaneous determination of 33 primary aromatic amines of free state in fine pigments by ultra-performance liquid chromatography coupled with triple quadrupole mass spectrometry].

PubMed

Man, Zhengyin; Wang, Quanlin; Li, Hesheng; Zhang, Aizhi

2014-12-01

A comprehensive analytical method based on ultra-performance liquid chromatography coupled with triple quadrupole mass spectrometry (UPLC-MS/MS) has been developed for the simultaneous determination of 33 primary aromatic amines (PAAs) in fine pigments such as gouache paint, oil painting pigment and acrylic paint. The primary aromatic amines in samples were extracted with acetonitrile. Then the extract was concentrated by centrifugation and nitrogen blow, finally diluted to 2 mL with methanol-water (1:9, v/v) and filtered through 0. 22 im membrane before UPLC-MS/MS analysis. The analytes were separated on a BEH Phenyl column (100 mm x 2. 1 mm, 1. 7 1µm) with 0. 07% (v/v) formic acid in methanol-water as mobile phases in gradient elution. The PAAs were detected by UPLC-MS/MS under multiple reaction monitoring (MRM) mode and quantified by the internal standard method. The separation conditions, fragment voltages and collision energies were optimized. The impacts of extraction times, extraction solvents and concentration methods on recoveries were studied. The limits of detection and limits of quantitation for the 33 primary aromatic amines were 5-50 µg/kg and 15-150 µg/kg respectively. The mean recoveries of three different dye products at three spiked levels were 70. 1% - 115. 8%. The relative standard deviations were 2. 1% - 15%. The expenmental results indicated that the method is simple, rapid, sensitive, accurate and can meet the requirements for the determination.

Ignition kinetics of boron in primary combustion products of propellant based on its unique characteristics

NASA Astrophysics Data System (ADS)

Ao, Wen; Wang, Yang; Wu, Shixi

2017-07-01

Study on the boron-based primary combustion products can bridge the gap between primary combustion and secondary combustion in solid rocket ramjets. To clarify the initial state and ignition characteristics of boron particles in the after-burning chamber of solid rocket ramjets, the elemental, composition and morphology of the primary combustion products collected under gas generator chamber pressure of 0.2 MPa and 6 MPa were investigated by energy dispersive (EDS), X-ray photoelectron spectroscopy (XPS) and scanning electron microscopy with energy dispersive (SEM-EDS) individually. The ignition times of boron particles among the primary combustion products were determined using a high temperature tube furnace system. The BD model was adopted for numerical verification. The numerical solution procedure of boron ignition model in a real afterburner chamber was modified. The results show that the sum of B, C, O elements in the primary combustion products reaches approximately 90%. The primary combustion products are mainly consisted of B, C, and B2O3. Images of the primary combustion products present highly agglomeration, indicating an oxidation of boron surface. Numerous spherical carbon particles with a diameter around 100 nm are observed in the products. Three features of the boron in the primary combustion products are obtained, compared to virgin boron. First most of the boron lumps are covered by carbon particles on the surface. Second the mean particle size is five times larger than that of virgin boron. Third the overall initial oxide layer covered on boron surface increases its thickness by above 0.1 μm. The ignition time of boron in the primary combustion products reaches 20-30 ms under 1673-1873 K, which is quite different from virgin boron of 4 ms. Numerical calculation results show the key reason leading to such a long ignition time is the variation of the initial oxide layer thickness. In conclusion, the physicochemical properties of boron particles are found to differ with virgin boron after primary combustion process. The accurate evaluation of the initial oxide layer thickness and initial particle radius is a crucial procedure before the numerical calculation of boron ignition kinetics. Results of our study are expected to provide better insight in the simulation of solid rocket ramjets working process.

Asymmetric Responses of Primary Productivity to Altered Precipitation Simulated by Land Surface Models across Three Long-term Grassland Sites

NASA Astrophysics Data System (ADS)

Wu, D.; Ciais, P.; Viovy, N.; Knapp, A.; Wilcox, K.; Bahn, M.; Smith, M. D.; Ito, A.; Arneth, A.; Harper, A. B.; Ukkola, A.; Paschalis, A.; Poulter, B.; Peng, C.; Reick, C. H.; Hayes, D. J.; Ricciuto, D. M.; Reinthaler, D.; Chen, G.; Tian, H.; Helene, G.; Zscheischler, J.; Mao, J.; Ingrisch, J.; Nabel, J.; Pongratz, J.; Boysen, L.; Kautz, M.; Schmitt, M.; Krohn, M.; Zeng, N.; Meir, P.; Zhang, Q.; Zhu, Q.; Hasibeder, R.; Vicca, S.; Sippel, S.; Dangal, S. R. S.; Fatichi, S.; Sitch, S.; Shi, X.; Wang, Y.; Luo, Y.; Liu, Y.; Piao, S.

2017-12-01

Changes in precipitation variability including the occurrence of extreme events strongly influence plant growth in grasslands. Field measurements of aboveground net primary production (ANPP) in temperate grasslands suggest a positive asymmetric response with wet years resulting in ANPP gains larger than ANPP declines in dry years. Whether land surface models used for historical simulations and future projections of the coupled carbon-water system in grasslands are capable to simulate such non-symmetrical ANPP responses remains an important open research question. In this study, we evaluate the simulated responses of grassland primary productivity to altered precipitation with fourteen land surface models at the three sites of Colorado Shortgrass Steppe (SGS), Konza prairie (KNZ) and Stubai Valley meadow (STU) along a rainfall gradient from dry to wet. Our results suggest that: (i) Gross primary production (GPP), NPP, ANPP and belowground NPP (BNPP) show nonlinear response curves (concave-down) in all the models, but with different curvatures and mean values. In contrast across the sites, primary production increases and then saturates along increasing precipitation with a flattening at the wetter site. (ii) Slopes of spatial relationships between modeled primary production and precipitation are steeper than the temporal slopes (obtained from inter-annual variations). (iii) Asymmetric responses under nominal precipitation range with modeled inter-annual primary production show large uncertainties, and model-ensemble median generally suggests negative asymmetry (greater declines in dry years than increases in wet years) across the three sites. (iv) Primary production at the drier site is predicted to more sensitive to precipitation compared to wetter site, and median sensitivity consistently indicates greater negative impacts of reduced precipitation than positive effects of increased precipitation under extreme conditions. This study implies that most models overemphasize the drought effects or underestimate the watering impacts on primary production in the normal-state, with the direct consequence that carbon-water interactions need to be improved in future model generations with improved mechanistic representations.

Primary atmospheric oxidation mechanism for toluene.

PubMed

Baltaretu, Cristian O; Lichtman, Eben I; Hadler, Amelia B; Elrod, Matthew J

2009-01-08

The products of the primary OH-initiated oxidation of toluene were investigated using the turbulent flow chemical ionization mass spectrometry technique at temperatures ranging from 228 to 298 K. A major dienedial-producing pathway was detected for the first time for toluene oxidation, and glyoxal and methylglyoxal were found to be minor primary oxidation products. The results suggest that secondary oxidation processes involving dienedial and epoxide primary products are likely responsible for previous observations of glyoxal and methylglyoxal products from toluene oxidation. Because the dienedial-producing pathway is a null cycle for tropospheric ozone production and glyoxal and methylglyoxal are important secondary organic aerosol precursors, these new findings have important implications for the modeling of toluene oxidation in the atmosphere.

[The Second Health Care Market: Market Mapping Based upon Consumer Perception].

PubMed

Teichert, T; Mühlbach, C

2018-03-01

The aim of the study was to present a picture of consumers' views on the specific market of health and health products, the second German health market. Market analysis of the product categories was carried out. A large-scale representative survey (N=1 033) determined with an innovative adaptation of the repertory grid method the consumer's perspective on the specific market. Basic questions concerning attitudes to health as well as healthy behaviors completed the telephone survey. In the saturated markets, market for health is growing, especially in the context of aging societies, and this is not limited to primary medical products. In this study, product categories such as "dental care", "fruit and vegetables" or "nuts" were classified as healthy products. The relevance of health also in the macroeconomic context has been long underestimated. Health has still a high priority for consumers. A disclosure of individual perceptions in the health context provides a significantly more relevant product design. The identification of healthy product dimensions from the consumer's perspective sheds light on the actually desired product properties and the available potential to meet these desires. © Georg Thieme Verlag KG Stuttgart · New York.

Substrates and oxygen dependent citric acid production by Yarrowia lipolytica: insights through transcriptome and fluxome analyses.

PubMed

Sabra, Wael; Bommareddy, Rajesh Reddy; Maheshwari, Garima; Papanikolaou, Seraphim; Zeng, An-Ping

2017-05-08

Unlike the well-studied backer yeast where catabolite repression represents a burden for mixed substrate fermentation, Yarrowia lipolytica, an oleaginous yeast, is recognized for its potential to produce single cell oils and citric acid from different feedstocks. These versatilities of Y. lipolytica with regards to substrate utilization make it an attractive host for biorefinery application. However, to develop a commercial process for the production of citric acid by Y. lipolytica, it is necessary to better understand the primary metabolism and its regulation, especially for growth on mixed substrate. Controlling the dissolved oxygen concentration (pO 2 ) in Y. lipolytica cultures enhanced citric acid production significantly in cultures grown on glucose in mono- or dual substrate fermentations, whereas with glycerol as mono-substrate no significant effect of pO 2 was found on citrate production. Growth on mixed substrate with glucose and glycerol revealed a relative preference of glycerol utilization by Y. lipolytica. Under optimized conditions with pO 2 control, the citric acid titer on glucose in mono- or in dual substrate cultures was 55 and 50 g/L (with productivity of 0.6 g/L*h in both cultures), respectively, compared to a maximum of 18 g/L (0.2 g/L*h) with glycerol in monosubstrate culture. Additionally, in dual substrate fermentation, glycerol limitation was found to trigger citrate consumption despite the presence of enough glucose in pO 2 -limited culture. The metabolic behavior of this yeast on different substrates was investigated at transcriptomic and 13 C-based fluxomics levels. Upregulation of most of the genes of the pentose phosphate pathway was found in cultures with highest citrate production with glucose in mono- or in dual substrate fermentation with pO 2 control. The activation of the glyoxylate cycle in the oxygen limited cultures and the imbalance caused by glycerol limitation might be the reason for the re-consumption of citrate in dual substrate fermentations. This study provides interesting targets for metabolic engineering of this industrial yeast.

Primary forest products industry and timber use, Kansas, 1980.

Treesearch

James E. Blyth; Leonard K. Gould; W. Brad Smith

1984-01-01

Highlights recent Kansas forest industry trends, production and receipts of saw logs in 1980, and production of other timber products in 1980. Reports on wood and bark residue generated at primary mills and the disposition of this residue.

Primary forest products industry and timber use, Nebraska, 1980.

Treesearch

James E. Blyth; Tom D. Wardle; W. Brad Smith

1984-01-01

Highlights recent Nebraska forest industry trends, production and receipts of saw logs in 1980, and production of other timber products in 1980. Reports on wood and bark residue generated at primary mills and the disposition of this residue.

The nonsteady state modeling of freeze drying: in-process product temperature and moisture content mapping and pharmaceutical product quality applications.

PubMed

Pikal, M J; Cardon, S; Bhugra, Chandan; Jameel, F; Rambhatla, S; Mascarenhas, W J; Akay, H U

2005-01-01

Theoretical models of the freeze-drying process are potentially useful to guide the design of a freeze-drying process as well as to obtain information not readily accessible by direct experimentation, such as moisture distribution and glass transition temperature, Tg, within a vial during processing. Previous models were either restricted to the steady state and/or to one-dimensional problems. While such models are useful, the restrictions seriously limit applications of the theory. An earlier work from these laboratories presented a nonsteady state, two-dimensional model (which becomes a three-dimensional model with an axis of symmetry) of sublimation and desorption that is quite versatile and allows the user to investigate a wide variety of heat and mass transfer problems in both primary and secondary drying. The earlier treatment focused on the mathematical details of the finite element formulation of the problem and on validation of the calculations. The objective of the current study is to provide the physical rational for the choice of boundary conditions, to validate the model by comparison of calculated results with experimental data, and to discuss several representative pharmaceutical applications. To validate the model and evaluate its utility in studying distribution of moisture and glass transition temperature in a representative product, calculations for a sucrose-based formulation were performed, and selected results were compared with experimental data. THEORETICAL MODEL: The model is based on a set of coupled differential equations resulting from constraints imposed by conservation of energy and mass, where numerical results are obtained using finite element analysis. Use of the model proceeds via a "modular software package" supported by Technalysis Inc. (Passage/ Freeze Drying). This package allows the user to define the problem by inputing shelf temperature, chamber pressure, container properties, product properties, and numerical analysis parameters required for the finite element analysis. Most input data are either available in the literature or may be easily estimated. Product resistance to water vapor flow, mass transfer coefficients describing secondary drying, and container heat transfer coefficients must normally be measured. Each element (i.e., each small subsystem of the product) may be assigned different values of product resistance to accurately describe the nonlinear resistance behavior often shown by real products. During primary drying, the chamber pressure and shelf temperature may be varied in steps. During secondary drying, the change in gas composition from pure water to mostly inert gas is calculated by the model from the instantaneous water vapor flux and the input pumping capacity of the freeze dryer. Comparison of the theoretical results with the experiment data for a 3% sucrose formulation is generally satisfactory. Primary drying times agree within two hours, and the product temperature vs. time curves in primary drying agree within about +/-1 degrees C. The residual moisture vs. time curve is predicted by the theory within the likely experimental error, and the lack of large variation in moisture within the vial (i.e., top vs. side vs. bottom) is also correctly predicted by theory. The theoretical calculations also provide the time variation of "Tg-T" during both primary and secondary drying, where T is product temperature and Tg is the glass transition temperature of the product phase. The calculations demonstrate that with a secondary drying protocol using a rapid ramp of shelf temperature, the product temperature does rise above Tg during early secondary drying, perhaps being a factor in the phenomenon known as "cake shrinkage." The theoretical results of in-process product temperature, primary drying time, and moisture content mapping and history are consistent with the experimental results, suggesting the theoretical model should be useful in process development and "trouble-shooting" applications.

The Use of Lactic Acid Bacteria Starter Cultures during the Processing of Fermented Cereal-based Foods in West Africa: A Review.

PubMed

Soro-Yao, Amenan Anastasie; Brou, Kouakou; Amani, Georges; Thonart, Philippe; Djè, Koffi Marcelin

2014-12-01

Lactic acid bacteria (LAB) are the primary microorganisms used to ferment maize-, sorghum- or millet-based foods that are processed in West Africa. Fermentation contributes to desirable changes in taste, flavour, acidity, digestibility and texture in gruels (ogi, baca, dalaki), doughs (agidi, banku, komé) or steam-cooked granulated products (arraw, ciacry, dégué). Similar to other fermented cereal foods that are available in Africa, these products suffer from inconsistent quality. The use of LAB starter cultures during cereal dough fermentation is a subject of increasing interest in efforts to standardise this step and guaranty product uniformity. However, their use by small-scale processing units or small agro-food industrial enterprises is still limited. This review aims to illustrate and discuss major issues that influence the use of LAB starter cultures during the processing of fermented cereal foods in West Africa.

The Use of Lactic Acid Bacteria Starter Cultures during the Processing of Fermented Cereal-based Foods in West Africa: A Review

PubMed Central

Soro-Yao, Amenan Anastasie; Brou, Kouakou; Amani, Georges; Thonart, Philippe; Djè, Koffi Marcelin

2014-01-01

Lactic acid bacteria (LAB) are the primary microorganisms used to ferment maize-, sorghum- or millet-based foods that are processed in West Africa. Fermentation contributes to desirable changes in taste, flavour, acidity, digestibility and texture in gruels (ogi, baca, dalaki), doughs (agidi, banku, komé) or steam-cooked granulated products (arraw, ciacry, dégué). Similar to other fermented cereal foods that are available in Africa, these products suffer from inconsistent quality. The use of LAB starter cultures during cereal dough fermentation is a subject of increasing interest in efforts to standardise this step and guaranty product uniformity. However, their use by small-scale processing units or small agro-food industrial enterprises is still limited. This review aims to illustrate and discuss major issues that influence the use of LAB starter cultures during the processing of fermented cereal foods in West Africa. PMID:27073601

A decade of insights into grassland ecosystem responses to global environmental change

USGS Publications Warehouse

Borer, Elizabeth T.; Grace, James B.; Harpole, W. Stanley; MacDougall, Andrew S.; Seabloom, Eric W.

2017-01-01

Earth’s biodiversity and carbon uptake by plants, or primary productivity, are intricately interlinked, underlie many essential ecosystem processes, and depend on the interplay among environmental factors, many of which are being changed by human activities. While ecological theory generalizes across taxa and environments, most empirical tests of factors controlling diversity and productivity have been observational, single-site experiments, or meta-analyses, limiting our understanding of variation among site-level responses and tests of general mechanisms. A synthesis of results from ten years of a globally distributed, coordinated experiment, the Nutrient Network (NutNet), demonstrates that species diversity promotes ecosystem productivity and stability, and that nutrient supply and herbivory control diversity via changes in composition, including invasions of non-native species and extinction of native species. Distributed experimental networks are a powerful tool for tests and integration of multiple theories and for generating multivariate predictions about the effects of global changes on future ecosystems.

Universal behavior of charged particle production in heavy ion collisions

NASA Astrophysics Data System (ADS)

Phobos Collaboration; Steinberg, Peter A.; Back, B. B.; Baker, M. D.; Barton, D. S.; Betts, R. R.; Ballintijn, M.; Bickley, A. A.; Bindel, R.; Budzanowski, A.; Busza, W.; Carroll, A.; Decowski, M. P.; Garcia, E.; George, N.; Gulbrandsen, K.; Gushue, S.; Halliwell, C.; Hamblen, J.; Heintzelman, G. A.; Henderson, C.; Hofman, D. J.; Hollis, R. S.; Hołński, R.; Holzman, B.; Iordanova, A.; Johnson, E.; Kane, J. L.; Katzy, J.; Khan, N.; Kucewicz, W.; Kulinich, P.; Kuo, C. M.; Lin, W. T.; Manly, S.; McLeod, D.; Michałowski, J.; Mignerey, A. C.; Nouicer, R.; Olszewski, A.; Pak, R.; Park, I. C.; Pernegger, H.; Reed, C.; Remsberg, L. P.; Reuter, M.; Roland, C.; Roland, G.; Rosenberg, L.; Sagerer, J.; Sarin, P.; Sawicki, P.; Skulski, W.; Steadman, S. G.; Steinberg, P.; Stephans, G. S. F.; Stodulski, M.; Sukhanov, A.; Tang, J.-L.; Teng, R.; Trzupek, A.; Vale, C.; van Nieuwenhuizen, G. J.; Verdier, R.; Wadsworth, B.; Wolfs, F. L. H.; Wosiek, B.; Woźniak, K.; Wuosmaa, A. H.; Wysłouch, B.

2003-03-01

The PHOBOS experiment at RHIC has measured the multiplicity of primary charged particles as a function of centrality and pseudorapidity in Au+Au collisions at sqrt(s_NN) = 19.6, 130 and 200 GeV. Two kinds of universal behavior are observed in charged particle production in heavy ion collisions. The first is that forward particle production, over a range of energies, follows a universal limiting curve with a non-trivial centrality dependence. The second arises from comparisons with pp/pbar-p and e+e- data. N_tot/(N_part/2) in nuclear collisions at high energy scales with sqrt(s) in a similar way as N_tot in e+e- collisions and has a very weak centrality dependence. This feature may be related to a reduction in the leading particle effect due to the multiple collisions suffered per participant in heavy ion collisions.

Universal behavior of charged particle production in heavy ion collisions at RHIC energies

NASA Astrophysics Data System (ADS)

Steinberg, Peter A.; Back, B. B.; Baker, M. D.; Barton, D. S.; Betts, R. R.; Ballintijn, M.; Bickley, A. A.; Bindel, R.; Budzanowski, A.; Busza, W.; Carroll, A.; Decowski, M. P.; García, E.; George, N.; Gulbrandsen, K.; Gushue, S.; Halliwell, C.; Hamblen, J.; Heintzelman, G. A.; Henderson, C.; Hofman, D. J.; Hollis, R. S.; Holyński, R.; Holzman, B.; Iordanova, A.; Johnson, E.; Kane, J. L.; Katzy, J.; Khan, N.; Kucewicz, W.; Kulinich, P.; Kuo, C. M.; Lin, W. T.; Manly, S.; McLeod, D.; Michałowski, J.; Mignerey, A. C.; Nouicer, R.; Olszewski, A.; Pak, R.; Park, I. C.; Pernegger, H.; Reed, C.; Remsberg, L. P.; Reuter, M.; Roland, C.; Roland, G.; Rosenberg, L.; Sagerer, J.; Sarin, P.; Sawicki, P.; Skulski, W.; Steadman, S. G.; Steinberg, P.; Stephans, G. S. F.; Stodulski, M.; Sukhanov, A.; Tang, J.-L.; Teng, R.; Trzupek, A.; Vale, C.; van Nieuwenhuizen, G. J.; Verdier, R.; Wadsworth, B.; Wolfs, F. L. H.; Wosiek, B.; Woźniak, K.; Wuosmaa, A. H.; Wysłouch, B.; Phobos Collaboration

2003-04-01

The PHOBOS experiment at RHIC has measured the multiplicity of primary charged particles as a function of centrality and pseudorapidity in Au+Au collisions at √ SNN = 19.6, 130 and 200 GeV. Two kinds of universal behavior are observed in charged particle production in heavy ion collisions. The first is that forward particle production, over a range of energies, follows a universal limiting curve with a non-trivial centrality dependence. The second arises from comparisons with pp/ overlinepp and e +e - data. < Nch>/< Npart/2> in nuclear collisions at high energy scales with √ s in a similar way as Nch in e +e - collisions and has a very weak centrality dependence. This feature may be related to a reduction in the leading particle effect due to the multiple collisions suffered per participant in heavy ion collisions.

Estimation of phytoplankton production from space: current status and future potential of satellite remote sensing.

PubMed

Joint; Groom

2000-07-30

A new generation of ocean colour satellites is now operational, with frequent observation of the global ocean. This paper reviews the potential to estimate marine primary production from satellite images. The procedures involved in retrieving estimates of phytoplankton biomass, as pigment concentrations, are discussed. Algorithms are applied to SeaWiFS ocean colour data to indicate seasonal variations in phytoplankton biomass in the Celtic Sea, on the continental shelf to the south west of the UK. Algorithms to estimate primary production rates from chlorophyll concentration are compared and the advantages and disadvantage discussed. The simplest algorithms utilise correlations between chlorophyll concentration and production rate and one equation is used to estimate daily primary production rates for the western English Channel and Celtic Sea; these estimates compare favourably with published values. Primary production for the central Celtic Sea in the period April to September inclusive is estimated from SeaWiFS data to be 102 gC m(-2) in 1998 and 93 gC m(-2) in 1999; published estimates, based on in situ incubations, are ca. 80 gC m(-2). The satellite data demonstrate large variations in primary production between 1998 and 1999, with a significant increase in late summer in 1998 which did not occur in 1999. Errors are quantified for the estimation of primary production from simple algorithms based on satellite-derived chlorophyll concentration. These data show the potential to obtain better estimates of marine primary production than are possible with ship-based methods, with the ability to detect short-lived phytoplankton blooms. In addition, the potential to estimate new production from satellite data is discussed.

Interannual variability of primary production and air-sea CO2 flux in the Atlantic and Indian sectors of the Southern Ocean.

NASA Astrophysics Data System (ADS)

Dufour, Carolina; Merlivat, Liliane; Le Sommer, Julien; Boutin, Jacqueline; Antoine, David

2013-04-01

As one of the major oceanic sinks of anthropogenic CO2, the Southern Ocean plays a critical role in the climate system. However, due to the scarcity of observations, little is known about physical and biological processes that control air-sea CO2 fluxes and how these processes might respond to climate change. It is well established that primary production is one of the major drivers of air-sea CO2 fluxes, consuming surface Dissolved Inorganic Carbon (DIC) during Summer. Southern Ocean primary production is though constrained by several limiting factors such as iron and light availability, which are both sensitive to mixed layer depth. Mixed layer depth is known to be affected by current changes in wind stress or freshwater fluxes over the Southern Ocean. But we still don't know how primary production may respond to anomalous mixed layer depth neither how physical processes may balance this response to set the seasonal cycle of air-sea CO2 fluxes. In this study, we investigate the impact of anomalous mixed layer depth on surface DIC in the Atlantic and Indian sectors of the Subantarctic zone of the Southern Ocean (60W-60E, 38S-55S) with a combination of in situ data, satellite data and model experiment. We use both a regional eddy permitting ocean biogeochemical model simulation based on NEMO-PISCES and data-based reconstruction of biogeochemical fields based on CARIOCA buoys and SeaWiFS data. A decomposition of the physical and biological processes driving the seasonal variability of surface DIC is performed with both the model data and observations. A good agreement is found between the model and the data for the amplitude of biological and air-sea flux contributions. The model data are further used to investigate the impact of winter and summer anomalies in mixed layer depth on surface DIC over the period 1990-2004. The relative changes of each physical and biological process contribution are quantified and discussed.

Across-shelf variability of phytoplankton composition, photosynthetic parameters and primary production in the NW Iberian upwelling system

NASA Astrophysics Data System (ADS)

Lorenzo, Luisa M.; Arbones, Belén; Tilstone, Gavin H.; Figueiras, Francisco G.

2005-02-01

Hydrographic conditions, phytoplankton composition and biomass, photosynthetic parameters and primary production were determined in the Ría de Vigo and adjacent shelf waters during April-May 1997 and September 1998. The sampling was designed to find the seasonal downwelling-upwelling and upwelling-downwelling transition periods characteristic of spring and autumn phytoplankton blooms. There was upwelling relaxation event followed by downwelling during both spring and autumn cruises. Temperature and salinity distributions showed that ría and shelf waters formed two distinct domains, which were separated by a thermohaline front at the mouth of the ría. The phytoplankton composition was completely different in the two environments. Cyanobacteria dominated on the shelf and constituted 46-66% of total phytoplankton biomass, while large phytoplankton (diatoms and dinoflagellates) were more abundant in the ría, especially during upwelling relaxation. However, the high shelf-ría exchange induced by a strong downwelling event on 7 September 1998 removed large phytoplankton (mainly diatoms) from the water column in the ría. Chlorophyll-specific maximum photosynthetic rates ( PmB) were significantly higher in the ría domain during upwelling relaxation, when autotrophic microplankton dominated in the interior. Primary production varied from 0.63 to 2.6 g C m -2 day -1 during the spring cruise and between 0.32 and 2.09 g C m -2 day -1 during the autumn cruise, with the highest values in the ría during both cruises. Primary production was relatively constant on the shelf with no significant differences between cruises, whereas differences were significant in the ría, with higher values during upwelling relaxation periods and lower values during downwelling. Analysis of light saturation parameters and light absorbed by phytoplanton in the water column suggests that photosynthesis was not light-limited either on the shelf or in the ría. It is concluded that upwelling-downwelling cycles were the main driving force, through changes in autotrophic microplankton biomass in the ría, that caused the variability observed in the ría-shelf system.

Net primary productivity of subalpine meadows in Yosemite National Park in relation to climate variability

Treesearch

Peggy E. Moore; Jan W. van Wagtendonk; Julie L. Yee; Mitchel P. McClaran; David N. Cole; Neil K. McDougald; Matthew L. Brooks

2013-01-01

Subalpine meadows are some of the most ecologically important components of mountain landscapes, and primary productivity is important to the maintenance of meadow functions. Understanding how changes in primary productivity are associated with variability in moisture and temperature will become increasingly important with current and anticipated changes in climate....

Immune Evasion by Epstein-Barr Virus.

PubMed

Ressing, Maaike E; van Gent, Michiel; Gram, Anna M; Hooykaas, Marjolein J G; Piersma, Sytse J; Wiertz, Emmanuel J H J

2015-01-01

Epstein-Bar virus (EBV) is widespread within the human population with over 90% of adults being infected. In response to primary EBV infection, the host mounts an antiviral immune response comprising both innate and adaptive effector functions. Although the immune system can control EBV infection to a large extent, the virus is not cleared. Instead, EBV establishes a latent infection in B lymphocytes characterized by limited viral gene expression. For the production of new viral progeny, EBV reactivates from these latently infected cells. During the productive phase of infection, a repertoire of over 80 EBV gene products is expressed, presenting a vast number of viral antigens to the primed immune system. In particular the EBV-specific CD4+ and CD8+ memory T lymphocytes can respond within hours, potentially destroying the virus-producing cells before viral replication is completed and viral particles have been released. Preceding the adaptive immune response, potent innate immune mechanisms provide a first line of defense during primary and recurrent infections. In spite of this broad range of antiviral immune effector mechanisms, EBV persists for life and continues to replicate. Studies performed over the past decades have revealed a wide array of viral gene products interfering with both innate and adaptive immunity. These include EBV-encoded proteins as well as small noncoding RNAs with immune-evasive properties. The current review presents an overview of the evasion strategies that are employed by EBV to facilitate immune escape during latency and productive infection. These evasion mechanisms may also compromise the elimination of EBV-transformed cells, and thus contribute to malignancies associated with EBV infection.

Sustainability of meat production beyond carbon footprint: a synthesis of case studies from grazing systems in Uruguay.

PubMed

Picasso, Valentín D; Modernel, Pablo D; Becoña, Gonzalo; Salvo, Lucía; Gutiérrez, Lucía; Astigarraga, Laura

2014-11-01

Livestock production has been challenged as a large contributor to climate change, and carbon footprint has become a widely used measure of cattle environmental impact. This analysis of fifteen beef grazing systems in Uruguay quantifies the range of variation of carbon footprint, and the trade-offs with other relevant environmental variables, using a partial life cycle assessment (LCA) methodology. Using carbon footprint as the primary environmental indicator has several limitations: different metrics (GWP vs. GTP) may lead to different conclusions, carbon sequestration from soils may drastically affect the results, and systems with lower carbon footprint may have higher energy use, soil erosion, nutrient imbalance, pesticide ecotoxicity, and impact on biodiversity. A multidimensional assessment of sustainability of meat production is therefore needed to inform decision makers. There is great potential to improve grazing livestock systems productivity while reducing carbon footprint and other environmental impacts, and conserving biodiversity. Copyright © 2014 Elsevier Ltd. All rights reserved.

Cartographic services contract...for everything geographic

USGS Publications Warehouse

,

2003-01-01

The U.S. Geological Survey's (USGS) Cartographic Services Contract (CSC) is used to award work for photogrammetric and mapping services under the umbrella of Architect-Engineer (A&E) contracting. The A&E contract is broad in scope and can accommodate any activity related to standard, nonstandard, graphic, and digital cartographic products. Services provided may include, but are not limited to, photogrammetric mapping and aerotriangulation; orthophotography; thematic mapping (for example, land characterization); analog and digital imagery applications; geographic information systems development; surveying and control acquisition, including ground-based and airborne Global Positioning System; analog and digital image manipulation, analysis, and interpretation; raster and vector map digitizing; data manipulations (for example, transformations, conversions, generalization, integration, and conflation); primary and ancillary data acquisition (for example, aerial photography, satellite imagery, multispectral, multitemporal, and hyperspectral data); image scanning and processing; metadata production, revision, and creation; and production or revision of standard USGS products defined by formal and informal specification and standards, such as those for digital line graphs, digital elevation models, digital orthophoto quadrangles, and digital raster graphics.

Two-dimensional isobutyl acetate production pathways to improve carbon yield

PubMed Central

Tashiro, Yohei; Desai, Shuchi H.; Atsumi, Shota

2015-01-01

For an economically competitive biological process, achieving high carbon yield of a target chemical is crucial. In biochemical production, pyruvate and acetyl-CoA are primary building blocks. When sugar is used as the sole biosynthetic substrate, acetyl-CoA is commonly generated by pyruvate decarboxylation. However, pyruvate decarboxylation during acetyl-CoA formation limits the theoretical maximum carbon yield (TMCY) by releasing carbon, and in some cases also leads to redox imbalance. To avoid these problems, we describe here the construction of a metabolic pathway that simultaneously utilizes glucose and acetate. Acetate is utilized to produce acetyl-CoA without carbon loss or redox imbalance. We demonstrate the utility of this approach for isobutyl acetate (IBA) production, wherein IBA production with glucose and acetate achieves a higher carbon yield than with either sole carbon source. These results highlight the potential for this multiple carbon source approach to improve the TMCY and balance redox in biosynthetic pathways. PMID:26108471

Food waste quantification in primary production - The Nordic countries as a case study.

PubMed

Hartikainen, Hanna; Mogensen, Lisbeth; Svanes, Erik; Franke, Ulrika

2018-01-01

Our understanding of food waste in the food supply chain has increased, but very few studies have been published on food waste in primary production. The overall aims of this study were to quantify the total amount of food waste in primary production in Finland, Sweden, Norway and Denmark, and to create a framework for how to define and quantify food waste in primary production. The quantification of food waste was based on case studies conducted in the present study and estimates published in scientific literature. The chosen scope of the study was to quantify the amount of edible food (excluding inedible parts like peels and bones) produced for human consumption that did not end up as food. As a result, the quantification was different from the existing guidelines. One of the main differences is that food that ends up as animal feed is included in the present study, whereas this is not the case for the recently launched food waste definition of the FUSIONS project. To distinguish the 'food waste' definition of the present study from the existing definitions and to avoid confusion with established usage of the term, a new term 'side flow' (SF) was introduced as a synonym for food waste in primary production. A rough estimate of the total amount of food waste in primary production in Finland, Sweden, Norway and Denmark was made using SF and 'FUSIONS Food Waste' (FFW) definitions. The SFs in primary production in the four Nordic countries were an estimated 800,000 tonnes per year with an additional 100,000 tonnes per year from the rearing phase of animals. The 900,000 tonnes per year of SF corresponds to 3.7% of the total production of 24,000,000 tonnes per year of edible primary products. When using the FFW definition proposed by the FUSIONS project, the FFW amount was estimated at 330,000 tonnes per year, or 1% of the total production. Copyright © 2017 Elsevier Ltd. All rights reserved.

Consequences of buffelgrass pasture development for primary productivity, perennial plant richness, and vegetation structure in the drylands of Sonora, Mexico.

PubMed

Franklin, Kimberly; Molina-Freaner, Francisco

2010-12-01

In large parts of northern Mexico native plant communities are being converted to non-native buffelgrass (Pennisetum ciliare) pastures, and this conversion could fundamentally alter primary productivity and species richness. In Sonora, Mexico land conversion is occurring at a regional scale along a rainfall-driven gradient of primary productivity, across which native plant communities transition from desert scrub to thorn scrub. We used a paired sampling design to compare a satellite-derived index of primary productivity, richness of perennial plant species, and canopy-height profiles of native plant communities with buffelgrass pastures. We sampled species richness across a gradient of primary productivity in desert scrub and thorn scrub vegetation to examine the influence of site productivity on the outcomes of land conversion. We also examined the influence of pasture age on species richness of perennial plants. Index values of primary productivity were lower in buffelgrass pastures than in native vegetation, which suggests a reduction in primary productivity. Land conversion reduced species richness by approximately 50% at local and regional scales, reduced tree and shrub cover by 78%, and reduced canopy height. Land conversion disproportionately reduced shrub species richness, which reflects the common practice among Sonoran ranchers of conserving certain tree and cactus species. Site productivity did not affect the outcomes of land conversion. The age of a buffelgrass pasture was unrelated to species richness within the pasture, which suggests that passive recovery of species richness to preconversion levels is unlikely. Our findings demonstrate that land conversion can result in large losses of plant species richness at local and regional scales and in substantial changes to primary productivity and vegetation structure, which casts doubt on the feasibility of restoring native plant communities without active intervention on the part of land managers. © 2010 Society for Conservation Biology.

Do Offshore Wind Farms Influence Marine Primary Production?

NASA Astrophysics Data System (ADS)

Tweddle, J. F.; Murray, R. B. O.; Gubbins, M.; Scott, B. E.

2016-02-01

Primary producers (phytoplankton) form the basis of marine food-webs, supporting production of higher trophic levels, and act as a sink of CO2. We considered the impact of proposed large scale offshore wind farms in moderately deep waters (> 45 m) off the east coast of Scotland on rates of primary production. A 2 stage modelling process was used, employing state-of-the-art 3-D hydrographic models with the ability to capture flow at the spatial resolution of 10 m combined with 1-D vertical modelling using 7 years of local forcing data. Through influencing the strength of stratification via changes in current flow, large (100 m) modelled wind turbine foundations had a significant effect on primary producers, consistently reducing total annual primary production, although within the range of natural interannual variability. The percentage reduction was largest over submarine banks less than 54 m in depth, and was outside the range of natural interannual variability. Smaller (10 m) turbine foundations had no discernible effect on total annual primary production. The results indicate that smaller foundations should be favored as a mitigation measure, in terms of effects on primary production, and this type of analysis should be considered within sectoral planning and licensing processes for future renewable energy developments.

Benthic oxygen consumption on continental shelves off eastern Canada

NASA Astrophysics Data System (ADS)

Grant, Jonathan; Emerson, Craig W.; Hargrave, Barry T.; Shortle, Jeannette L.

1991-08-01

The consumption of phytoplankton production by the benthos is an important component of organic carbon budgets for continental shelves. Sediment texture is a major factor regulating benthic processes because fine sediment areas are sites of enhanced deposition from the water column, resulting in increased organic content, bacterial biomass and community metabolism. Although continental shelves at mid- to high latitudes consist primarily of coarse relict sediments ( PIPER, Continental Shelf Research, 11, 1013-1035), shelf regions of boreal and subarctic eastern Canada contain large areas of silt and clay sediments ( FADER, Continental Shelf Research, 11, 1123-1153). We collated estimates of benthic oxygen consumption in coarse (<20% silt-clay, <0.5% organic matter) and fine sediments (20% silt-clay, 0.5% organic matter) for northwest Atlantic continental shelves including new data for Georges Bank, the Scotian Shelf, the Grand Banks of Newfoundland and Labrador Shelf. Estimates were applied to the areal distribution of sediment type on these shelves to obtain a general relationship between sediment texture and benthic carbon consumption. Mean benthic oxygen demand was 2.7 times greater in fine sediment than in coarse sediment, when normalized to mean annual temperature. In terms of carbon equivalents, shelf regions with minimal fine sediment (Georges Bank, the Grand Banks of Newfoundland-northeast Newfoundland) consumed only 5-8% of annual primary production. Benthos of the Gulf of Maine (100% fine sediment) and the Scotian Shelf (35% fine sediment) utilized 16-19% of primary production. Although 32% of the Labrador Shelf area contained fine sediments, benthic consumption of pelagic production (8%) was apparently limited by low mean annual temperature (2°C). These results indicate that incorporation of sediment-specific oxygen uptake into shelf carbon budgets may increase estimates of benthic consumption by 50%. Furthermore, respiration and production by large macrofauna allow an even greater proportion of primary production to enter benthic pathways. Fine sediment areas (shelf basins or "depocenters") are postulated to be sites of enhanced biological activity which must be considered in the modelling of shelf carbon budgets and the role of the benthos in demersal fisheries.

Primary forest products industry and industrial roundwood production, Michigan, 1969.

Treesearch

James E. Blyth; Allen H. Boelter

1971-01-01

Michigan loggers cut 173.8 million cubic feet of industrial roundwood products in 1969. Ninety percent was pulpwood and saw logs. Production is shifting from softwoods to hardwoods. The number of active primary wood-using mills declined rapidly from 1954 to 1969, but production per mill has expanded.

Primary forest products industry and timber use, Iowa, 1972.

Treesearch

James E. Blyth; William A. Farris

1975-01-01

Discusses recent Iowa forest industry trends, and production of saw logs, veneer logs, pulpwood, and other roundwood products. Comments on outlook for Iowa forest industry and production and use of roundwood and primary wood-using plant wood and bark residue.

Changes in carbon allocation to aboveground versus belowground forest components is driven by a trade-off involving mycorrhizal fungi, not fine roots

NASA Astrophysics Data System (ADS)

Ouimette, A.; Ollinger, S. V.; Hobbie, E. A.; Lepine, L. C.; Stephens, R.; Rowe, R.; Vadeboncoeur, M. A.; Tumber-Davila, S. J.

2017-12-01

Species composition and resource availability exert a strong influence on the dynamics of carbon allocation among different forest ecosystem components. Recent work in temperate forests has highlighted a tradeoff between carbon allocation to aboveground woody tissues (access to light), and belowground to fine roots (access to soil nutrients). Although root-associated mycorrhizal fungi are crucial for N acquisition and can receive 20% or more of annual net primary production, most studies fail to explicitly include carbon allocation to mycorrhizal fungi. In part, this is due to the inherent difficulties in accurately quantifying fungal production. We took several approaches to quantify production of mycorrhizal fungi, including a carbon budget approach and isotopic techniques. Here we present data on patterns of carbon allocation to aboveground (wood and foliar production), and belowground components (production of fine roots and mycorrhizal fungi), across temperate forest stands spanning a range of nitrogen availability and species composition. We found that as the proportion of conifer species decreased, and stand nitrogen availability increased, both the absolute amount and the fraction of net primary production increased for foliage, aboveground wood, and fine roots ("a rising tide lifts all boats"). While allocation to plant pools increased, allocation to mycorrhizal fungi significantly decreased with decreasing conifer dominance and increasing soil nitrogen availability. We did not find a strong trade-off between carbon allocation to fine roots and aboveground wood or foliage. Instead, a negative relationship is seen between allocation to mycorrhizal fungi and other plant pools. Effort to estimate carbon allocation to mycorrhizal fungi is important for gaining a more complete understanding of how ecosystems respond to changes in growth-limiting resources.

Late Byzantine Mineral Soda High Alumina Glasses from Asia Minor: A New Primary Glass Production Group

PubMed Central

Schibille, Nadine

2011-01-01

The chemical characterisation of archaeological glass allows the discrimination between different glass groups and the identification of raw materials and technological traditions of their production. Several lines of evidence point towards the large-scale production of first millennium CE glass in a limited number of glass making factories from a mixture of Egyptian mineral soda and a locally available silica source. Fundamental changes in the manufacturing processes occurred from the eight/ninth century CE onwards, when Egyptian mineral soda was gradually replaced by soda-rich plant ash in Egypt as well as the Islamic Middle East. In order to elucidate the supply and consumption of glass during this transitional period, 31 glass samples from the assemblage found at Pergamon (Turkey) that date to the fourth to fourteenth centuries CE were analysed by electron microprobe analysis (EPMA) and by laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS). The statistical evaluation of the data revealed that the Byzantine glasses from Pergamon represent at least three different glass production technologies, one of which had not previously been recognised in the glass making traditions of the Mediterranean. While the chemical characteristics of the late antique and early medieval fragments confirm the current model of glass production and distribution at the time, the elemental make-up of the majority of the eighth- to fourteenth-century glasses from Pergamon indicate the existence of a late Byzantine glass type that is characterised by high alumina levels. Judging from the trace element patterns and elevated boron and lithium concentrations, these glasses were produced with a mineral soda different to the Egyptian natron from the Wadi Natrun, suggesting a possible regional Byzantine primary glass production in Asia Minor. PMID:21526144

Late Byzantine mineral soda high alumina glasses from Asia Minor: a new primary glass production group.

PubMed

Schibille, Nadine

2011-04-19

The chemical characterisation of archaeological glass allows the discrimination between different glass groups and the identification of raw materials and technological traditions of their production. Several lines of evidence point towards the large-scale production of first millennium CE glass in a limited number of glass making factories from a mixture of Egyptian mineral soda and a locally available silica source. Fundamental changes in the manufacturing processes occurred from the eight/ninth century CE onwards, when Egyptian mineral soda was gradually replaced by soda-rich plant ash in Egypt as well as the Islamic Middle East. In order to elucidate the supply and consumption of glass during this transitional period, 31 glass samples from the assemblage found at Pergamon (Turkey) that date to the fourth to fourteenth centuries CE were analysed by electron microprobe analysis (EPMA) and by laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS). The statistical evaluation of the data revealed that the Byzantine glasses from Pergamon represent at least three different glass production technologies, one of which had not previously been recognised in the glass making traditions of the Mediterranean. While the chemical characteristics of the late antique and early medieval fragments confirm the current model of glass production and distribution at the time, the elemental make-up of the majority of the eighth- to fourteenth-century glasses from Pergamon indicate the existence of a late Byzantine glass type that is characterised by high alumina levels. Judging from the trace element patterns and elevated boron and lithium concentrations, these glasses were produced with a mineral soda different to the Egyptian natron from the Wadi Natrun, suggesting a possible regional Byzantine primary glass production in Asia Minor.

Urban expansion brought stress to food security in China: Evidence from decreased cropland net primary productivity.

PubMed

He, Chunyang; Liu, Zhifeng; Xu, Min; Ma, Qun; Dou, Yinyin

2017-01-15

Cropland net primary productivity (CNPP) is a crucial indicator of grain productivity and food security. However, assessments of the impact of urban expansion on the CNPP in China have been inadequate owing to data limitations. In this paper, our objective was to assess the impact of urban expansion on the CNPP in China from 1992 to 2015 in a spatially explicit manner. We first obtained the CNPP before urban expansion between 1992 and 2015 in China using the Carnegie-Ames-Stanford Approach (CASA) model. We then assessed the impact of urban expansion on the CNPP from 1992 to 2015 at multiple scales (the whole country, agricultural zones, and urban expansion hotspots) by combining the CNPP before urban expansion with the urban land coverage time series extracted from multi-source remotely sensed data. We found that the total loss of the CNPP due to urban expansion from 1992 to 2015 was 13.77TgC, which accounts for 1.88% of the CNPP before urban expansion in China. This CNPP loss resulted in a 12.45-million-ton decrease in grain production in China, corresponding to a reduction in the mean annual grain self-sufficiency rate of 2%. Therefore, we concluded that rapid urban expansion from 1992 to 2015 caused stress to China's food security. We suggest that it is still vital for China to effectively protect cropland to improve the urbanization level to 60% by 2020. Copyright © 2016 Elsevier B.V. All rights reserved.

Chemosynthetic symbionts of marine invertebrate animals are capable of nitrogen fixation.

PubMed

Petersen, Jillian M; Kemper, Anna; Gruber-Vodicka, Harald; Cardini, Ulisse; van der Geest, Matthijs; Kleiner, Manuel; Bulgheresi, Silvia; Mußmann, Marc; Herbold, Craig; Seah, Brandon K B; Antony, Chakkiath Paul; Liu, Dan; Belitz, Alexandra; Weber, Miriam

2016-10-24

Chemosynthetic symbioses are partnerships between invertebrate animals and chemosynthetic bacteria. The latter are the primary producers, providing most of the organic carbon needed for the animal host's nutrition. We sequenced genomes of the chemosynthetic symbionts from the lucinid bivalve Loripes lucinalis and the stilbonematid nematode Laxus oneistus. The symbionts of both host species encoded nitrogen fixation genes. This is remarkable as no marine chemosynthetic symbiont was previously known to be capable of nitrogen fixation. We detected nitrogenase expression by the symbionts of lucinid clams at the transcriptomic and proteomic level. Mean stable nitrogen isotope values of Loripes lucinalis were within the range expected for fixed atmospheric nitrogen, further suggesting active nitrogen fixation by the symbionts. The ability to fix nitrogen may be widespread among chemosynthetic symbioses in oligotrophic habitats, where nitrogen availability often limits primary productivity.

Living with schizophrenia: Health-related quality of life among primary family caregivers.

PubMed

Hsiao, Chiu-Yueh; Lee, Chun-Te; Lu, Huei-Lan; Tsai, Yun-Fang

2017-12-01

To examine influencing factors of health-related quality of life in primary family caregivers of people with schizophrenia receiving inpatient psychiatric rehabilitation services. Families, particularly primary family caregivers, have become more important than ever in mental health care. Yet, research on health-related quality of life among primarily family caregivers is limited. A correlational study design was used. A convenience sample of 122 primary family caregivers participated in the study. Data were analysed with descriptive statistics, Pearson's product-moment correlation, t test, one-way analysis of variance and a hierarchical multiple regression analysis. Primary family caregivers who were parents, older, less educated, and had a lower monthly household income, increased affiliate stigma and decreased quality of family-centred care experienced poor health-related quality of life. Particularly, monthly household income, affiliate stigma and quality of family-centred care appeared to be the most critical determinants of health-related quality of life. Efforts to enhance satisfaction of life should focus on reducing affiliate stigma as well as increasing monthly household income and strengthening the quality of family-centred care. Findings may assist in the development of culturally integrated rehabilitation programmes to decrease affiliate stigma and increase family engagement as a means of promoting quality of life for primary family caregivers living with people who have schizophrenia. © 2017 John Wiley & Sons Ltd.

Including Memory Friction in Single- and Two-State Quantum Dynamics Simulations.

PubMed

Brown, Paul A; Messina, Michael

2016-03-03

We present a simple computational algorithm that allows for the inclusion of memory friction in a quantum dynamics simulation of a small, quantum, primary system coupled to many atoms in the surroundings. We show how including a memory friction operator, F̂, in the primary quantum system's Hamiltonian operator builds memory friction into the dynamics of the primary quantum system. We show that, in the harmonic, semi-classical limit, this friction operator causes the classical phase-space centers of a wavepacket to evolve exactly as if it were a classical particle experiencing memory friction. We also show that this friction operator can be used to include memory friction in the quantum dynamics of an anharmonic primary system. We then generalize the algorithm so that it can be used to treat a primary quantum system that is evolving, non-adiabatically on two coupled potential energy surfaces, i.e., a model that can be used to model H atom transfer, for example. We demonstrate this approach's computational ease and flexibility by showing numerical results for both harmonic and anharmonic primary quantum systems in the single surface case. Finally, we present numerical results for a model of non-adiabatic H atom transfer between a reactant and product state that includes memory friction on one or both of the non-adiabatic potential energy surfaces and uncover some interesting dynamical effects of non-memory friction on the H atom transfer process.

Can nitrogen fertilization aid restoration of mature tree productivity in degraded dryland riverine ecosystems?

USGS Publications Warehouse

Andersen, Douglas C.; Adair, Elizabeth Carol; Nelson, Sigfrid Mark; Binkley, Dan

2014-01-01

Restoration of riparian forest productivity lost as a consequence of flow regulation is a common management goal in dryland riverine ecosystems. In the northern hemisphere, dryland river floodplain trees often include one or another species of Populus, which are fast-growing, nutrient-demanding trees. Because the trees are phreatophytic in drylands, and have water needs met in whole or in part by a shallow water table, their productivity may be limited by nitrogen (N) availability, which commonly limits primary productivity in mesic environments. We added 20 g N m−2 in a 2-m radius around the base of mature Populus fremontii along each of a regulated and free-flowing river in semiarid northwest Colorado, USA (total n = 42) in order to test whether growth is constrained by low soil N. Twelve years after fertilization, we collected increment cores from these and matched unfertilized trees and compared radial growth ratios (growth in the 3-year post-fertilization period/growth in the 3-year pre-fertilization period) in paired t tests. We expected a higher mean ratio in the fertilized trees. No effect from fertilization was detected, nor was a trend evident on either river. An alternative test using analysis of covariance (ANCOVA) produced a similar result. Our results underscore the need for additional assessment of which and to what extent factors other than water control dryland riverine productivity. Positive confirmation of adequate soil nutrients at these and other dryland riparian sites would bolster the argument that flow management is necessary and sufficient to maximize productivity and enhance resilience in affected desert riverine forests.

Validating bifidobacterial species and subspecies identity in commercial probiotic products.

PubMed

Lewis, Zachery T; Shani, Guy; Masarweh, Chad F; Popovic, Mina; Frese, Steve A; Sela, David A; Underwood, Mark A; Mills, David A

2016-03-01

The ingestion of probiotics to attempt to improve health is increasingly common; however, quality control of some commercial products can be limited. Clinical practice is shifting toward the routine use of probiotics to aid in prevention of necrotizing enterocolitis in premature infants, and probiotic administration to term infants is increasingly common to treat colic and/or prevent atopic disease. Since bifidobacteria dominate the feces of healthy breast-fed infants, they are often included in infant-targeted probiotics. We evaluated 16 probiotic products to determine how well their label claims describe the species of detectable bifidobacteria in the product. Recently developed DNA-based methods were used as a primary means of identification, and were confirmed using culture-based techniques. We found that the contents of many bifidobacterial probiotic products differ from the ingredient list, sometimes at a subspecies level. Only 1 of the 16 probiotics perfectly matched its bifidobacterial label claims in all samples tested, and both pill-to-pill and lot-to-lot variation were observed. Given the known differences between various bifidobacterial species and subspecies in metabolic capacity and colonization abilities, the prevalence of misidentified bifidobacteria in these products is cause for concern for those involved in clinical trials and consumers of probiotic products.

Cosmogenic-nuclide production by primary cosmic-ray protons

NASA Technical Reports Server (NTRS)

Reedy, R. C.

1985-01-01

The production rates of cosmogenic nuclides were calculated for the primary protons in the galactic and solar cosmic rays. At 1 AU, the long-term average fluxes of solar protons usually produce many more atoms of cosmogenic nuclide than the primary protons in the galactic cosmic rays (GCR). Because the particle fluxes inside meteorites and other large objects in space include many secondary neutrons, the production rates and ratios inside large objects are often very different from those by just the primary GCR protons. It is possible to determine if a small object, was small in space or broken from a meteorite. Because heliospherical modulation and other interactions change the GCR particle spectrum, the production of cosmogenic nuclides by the GCR particles outside the heliosphere will be different from that by modulated GCR primaries.

Alaska's timber harvest and forest products industry, 2005

Treesearch

Jeff M. Halbrook; Todd A. Morgan; Jason P. Brandt; Charles E. Keegan; Thale Dillon; Tara M. Barrett

2009-01-01

This report traces the flow of timber harvested in Alaska during calendar year 2005, describes the composition and operations of the state's primary forest products industry, and quantifies volumes and uses of wood fiber. Historical wood products industry changes are discussed, as well as trends in timber harvest, production, and sales of primary wood products....

Primary forest products industry and timber use, Wisconsin, 1973.

Treesearch

James E. Blyth; Eugene F. Landt; James W. Whipple; Jerold T. Hahn

1976-01-01

Discusses recent Wisconsin forest industry trends; timber removals for industrial roundwood in 1973; production and receipts in 1973 of pulpwood, saw logs, veneer logs, and other industrial roundwood products. Shows trends in pulpwood and veneer log production and compares saw log production in 1967 and 1973. Discusses primary wood-using plant residue and its...

Primary forest products industry and timber use, Minnesota, 1973.

Treesearch

James E. Blyth; Steven Wilhelm; Jerold T. Hahn

1979-01-01

Discusses recent Minnesota forest industry trends; timber removals for industrial roundwood in 1973; production and receipts in 1973 of pulpwood, saw logs, and other industrial roundwood products. Shows trends in pulpwood and veneer log production and compares saw log production in 1960 and 1973. Discusses primary wood-using mill residue and its disposition.

Primary forest products industry and timber use, Michigan, 1972.

Treesearch

James E. Blyth; Allan H. Boelter; Carl W. Danielson

1975-01-01

Discusses recent Michigan forest industry trends; timber removals for industrial roundwood in 1972; production and receipts in 1972 of pulpwood, saw logs, veneer logs ,and other roundwood products. Shows trends in pulpwood and veneer-log production, and compares saw log production in 1969 and 1972. Discusses primary wood-using plant residue and its disposition.

Central San Francisco Bay suspended-sediment transport processes study and comparison of continuous and discrete measurements of suspended-solids concentrations

USGS Publications Warehouse

Schoellhamer, David H.

1994-01-01

Sediments are an important component of the San Francisco Bay estuarine system. Potentially toxic substances, such as metals and pesticides, adsorb to sediment particles. The sediments on the bottom of the Bay provide the habitat for benthic communities which can ingest these substances and introduce them into the food web. The bottom sediments are also a reservoir of nutrients. The transport and fate of suspended sediment is an important factor in determining the transport and fate of the constituents adsorbed on the sediment. Suspended sediments also limit light availability in the bay, which limits photosynthesis and primary production, and deposit in ports and shipping channels, which require dredging. Dredged materials are disposed in Central San Francisco Bay.

New Multicentury Evidence for Dispersal Limitation during Primary Succession.

PubMed

Makoto, K; Wilson, Scott D

2016-06-01

Primary succession is limited by both ecosystem development and plant dispersal, but the extent to which dispersal constrains succession over the long-term is unknown. We compared primary succession along two co-occurring arctic chronosequences with contrasting spatial scales: sorted circles that span a few meters and may have few dispersal constraints and glacial forelands that span several kilometers and may have greater dispersal constraints. Dispersal constraints slowed primary succession by centuries: plots were dominated by cryptogams after 20 years on circles but after 270 years on forelands; plots supported deciduous plants after 100 years on circles but after >400 years on forelands. Our study provides century-scale evidence suggesting that dispersal limitations constrain the rate of primary succession in glacial forelands.

Study of the impact of organic nitrate production on ozone production in a southeastern mixed forest environment using a 0-D photochemical model

NASA Astrophysics Data System (ADS)

Mcavey, K. M.; Groff, C. J.; Xiong, F.; Seeley, J. V.; Starn, T.; Feiner, P. A.; Zhang, L.; Brune, W. H.; Baumann, K.; Misztal, P. K.; Koss, A.; De Gouw, J. A.; Olson, K. F.; Goldstein, A. H.; Bertman, S. B.; Shepson, P. B.

2014-12-01

Organic nitrates (RONO2 + ROONO2) act as an important sink for both organic alkoxy and peroxy and NOx (NO+NO2) radicals, and thus their production can have a significant limiting impact on ozone production. However, there remains significant uncertainty on the formation yields and fates of organic nitrates in the atmosphere. This certainly applies to the biogenic volatile organic compounds (BVOCs), which can often be the dominant reaction partner for OH and thus precursors to the peroxy radicals that produce ozone. Observations of BVOCs and total isoprene and monoterpene nitrates were measured as part of the Southern Oxidant and Aerosol Study in the summer of 2013, at the SEARCH Centreville site in rural, central Alabama. A 0-D box model was constructed to observe the effect of individual and total organic nitrates on ozone production potential, to determine the relative importance of each species in organic nitrate formation. Here we examine the impact of yield uncertainty, and secondary oxidation reactions that might release NOx from the primary organic nitrates.

Asymmetric responses of primary productivity to altered precipitation simulated by ecosystem models across three long-term grassland sites

NASA Astrophysics Data System (ADS)

Wu, Donghai; Ciais, Philippe; Viovy, Nicolas; Knapp, Alan K.; Wilcox, Kevin; Bahn, Michael; Smith, Melinda D.; Vicca, Sara; Fatichi, Simone; Zscheischler, Jakob; He, Yue; Li, Xiangyi; Ito, Akihiko; Arneth, Almut; Harper, Anna; Ukkola, Anna; Paschalis, Athanasios; Poulter, Benjamin; Peng, Changhui; Ricciuto, Daniel; Reinthaler, David; Chen, Guangsheng; Tian, Hanqin; Genet, Hélène; Mao, Jiafu; Ingrisch, Johannes; Nabel, Julia E. S. M.; Pongratz, Julia; Boysen, Lena R.; Kautz, Markus; Schmitt, Michael; Meir, Patrick; Zhu, Qiuan; Hasibeder, Roland; Sippel, Sebastian; Dangal, Shree R. S.; Sitch, Stephen; Shi, Xiaoying; Wang, Yingping; Luo, Yiqi; Liu, Yongwen; Piao, Shilong

2018-06-01

Field measurements of aboveground net primary productivity (ANPP) in temperate grasslands suggest that both positive and negative asymmetric responses to changes in precipitation (P) may occur. Under normal range of precipitation variability, wet years typically result in ANPP gains being larger than ANPP declines in dry years (positive asymmetry), whereas increases in ANPP are lower in magnitude in extreme wet years compared to reductions during extreme drought (negative asymmetry). Whether the current generation of ecosystem models with a coupled carbon-water system in grasslands are capable of simulating these asymmetric ANPP responses is an unresolved question. In this study, we evaluated the simulated responses of temperate grassland primary productivity to scenarios of altered precipitation with 14 ecosystem models at three sites: Shortgrass steppe (SGS), Konza Prairie (KNZ) and Stubai Valley meadow (STU), spanning a rainfall gradient from dry to moist. We found that (1) the spatial slopes derived from modeled primary productivity and precipitation across sites were steeper than the temporal slopes obtained from inter-annual variations, which was consistent with empirical data; (2) the asymmetry of the responses of modeled primary productivity under normal inter-annual precipitation variability differed among models, and the mean of the model ensemble suggested a negative asymmetry across the three sites, which was contrary to empirical evidence based on filed observations; (3) the mean sensitivity of modeled productivity to rainfall suggested greater negative response with reduced precipitation than positive response to an increased precipitation under extreme conditions at the three sites; and (4) gross primary productivity (GPP), net primary productivity (NPP), aboveground NPP (ANPP) and belowground NPP (BNPP) all showed concave-down nonlinear responses to altered precipitation in all the models, but with different curvatures and mean values. Our results indicated that most models overestimate the negative drought effects and/or underestimate the positive effects of increased precipitation on primary productivity under normal climate conditions, highlighting the need for improving eco-hydrological processes in those models in the future.

CIRCULAR POLARIZATION OF PULSAR WIND NEBULAE AND THE COSMIC-RAY POSITRON EXCESS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Linden, Tim, E-mail: trlinden@uchicago.edu

2015-02-01

Recent observations by the PAMELA and AMS-02 telescopes have uncovered an anomalous rise in the positron fraction at energies above 10 GeV. One possible explanation for this excess is the production of primary electron/positron pairs through electromagnetic cascades in pulsar magnetospheres. This process results in a high multiplicity of electron/positron pairs within the wind-termination shock of pulsar wind nebulae (PWNe). A consequence of this scenario is that no circular polarization should be observed within PWNe, since the contributions from electrons and positrons exactly cancel. Here we note that current radio instruments are capable of setting meaningful limits on the circular polarizationmore » of synchrotron radiation in PWNe, which observationally test the model for pulsar production of the local positron excess. The observation of a PWN with detectable circular polarization would cast strong doubt on pulsar interpretations of the positron excess, while observations setting strong limits on the circular polarization of PWNe would lend credence to these models. Finally, we indicate which PWNe are likely to provide the best targets for observational tests of the AMS-02 excess.« less

The significance of microbial processes in hydrogeology and geochemistry

USGS Publications Warehouse

Chapelle, F.H.

2000-01-01

Microbial processes affect the chemical composition of groundwater and the hydraulic properties of aquifers in both contaminated and pristine groundwater systems. The patterns of water-chemistry changes that occur depend upon the relative abundance of electron donors and electron acceptors. In many pristine aquifers, where microbial metabolism is limited by the availability of electron donors (usually organic matter), dissolved inorganic carbon (DIC) accumulates slowly along aquifer flow paths and available electron acceptors are consumed sequentially in the order dissolved oxygen > nitrate > Fe(III) > sulfate > CO2 (methanogenesis). In aquifers contaminated by anthropogenic contaminants, an excess of available organic carbon often exists, and microbial metabolism is limited by the availability of electron acceptors. In addition to changes in groundwater chemistry, the solid matrix of the aquifer is affected by microbial processes. The production of carbon dioxide and organic acids can lead to increased mineral solubility, which can lead to the development of secondary porosity and permeability. Conversely, microbial production of carbonate, ferrous iron, and sulfide can result in the precipitation of secondary calcite or pyrite cements that reduce primary porosity and permeability in groundwater systems.

Analysis of 16 phthalic acid esters in food simulants from plastic food contact materials by LC-ESI-MS/MS.

PubMed

Li, Xiaojing; Xiong, Wenming; Lin, Hua; Zhuo, Liyang; Lv, Shuiyuan; Tang, Xi; Chen, Minshi; Zou, Zhexiang; Lin, Zhenyu; Qiu, Bin; Chen, Guonan

2013-02-01

An RP LC-ESI-MS/MS method for the determination of the migration of 16 primary phthalic acid esters from plastic samples has been developed using distilled water, 3% acetic acid, 10% alcohol, and olive oil as food simulants. Detection limits were 1.6-18.5 μg/kg in distilled water, 1.4-17.3 μg/kg in 3% acetic acid, 1.4-19.2 μg/kg in 10% alcohol, and 31.9-390.8 μg/kg in olive oil. The RSDs were in the range of 0.07-11.28%. The real plastic products inspection showed that only few analyzed samples were phthalates contaminated. Bis-2-ethylhexyl ester and dibutyl phthalate were the common items migrated from the plastic products into food and feeds, but the migration concentrations were far below the limits set by European Union (1.5 mg/kg for bis-2-ethylhexyl ester and 0.3 mg/kg for dibutyl phthalate). © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Pre-breeding for diversification of primary gene pool and genetic enhancement of grain legumes

PubMed Central

Sharma, Shivali; Upadhyaya, H. D.; Varshney, R. K.; Gowda, C. L. L.

2013-01-01

The narrow genetic base of cultivars coupled with low utilization of genetic resources are the major factors limiting grain legume production and productivity globally. Exploitation of new and diverse sources of variation is needed for the genetic enhancement of grain legumes. Wild relatives with enhanced levels of resistance/tolerance to multiple stresses provide important sources of genetic diversity for crop improvement. However, their exploitation for cultivar improvement is limited by cross-incompatibility barriers and linkage drags. Pre-breeding provides a unique opportunity, through the introgression of desirable genes from wild germplasm into genetic backgrounds readily used by the breeders with minimum linkage drag, to overcome this. Pre-breeding activities using promising landraces, wild relatives, and popular cultivars have been initiated at International Crops Research Institute for the Semi-Arid Tropics (ICRISAT) to develop new gene pools in chickpea, pigeonpea, and groundnut with a high frequency of useful genes, wider adaptability, and a broad genetic base. The availability of molecular markers will greatly assist in reducing linkage drags and increasing the efficiency of introgression in pre-breeding programs. PMID:23970889

Hydrologic and water-quality characteristics of Caño Boquerón, Cabo Rojo, and Puerto Mosquito, Isla de Vieques, Puerto Rico, July 2015–July 2016

USGS Publications Warehouse

Gómez-Fragoso, Julieta M.; Santiago-Sáez, José A.

2018-05-07

Coastal lagoons are common features of the Puerto Rico shoreline that provide habitat for commercial and recreational species and serve important roles in the nutrient cycle of the ecosystems. The U.S. Geological Survey, in cooperation with the Puerto Rico Environmental Quality Board, conducted a limnological study at Caño Boquerón in Cabo Rojo and at Puerto Mosquito on Isla de Vieques, Puerto Rico, to assess the principal mechanisms affecting the hydrology and water-quality characteristics of these coastal lagoons and provide baseline information to the regulatory agencies responsible for the management and conservation of these coastal waters and the preservation of their aquatic life.Field measurements and water samples were collected and processed during July 2015–July 2016 for analysis of physical, chemical, biological, and bacteriological characteristics. In addition, bathymetric surveys were made and sediment cores were collected in each lagoon to determine water volume and sediment deposition rate. Physicochemical properties assessed at Caño Boquerón indicated values were generally in compliance with Puerto Rico Environmental Quality Board standards; turbidity was occasionally slightly greater than the established standards, and dissolved oxygen concentration at bottom depths was lower than standards limits. Water transparency was evaluated through the Secchi disk method, and the average depth of disappearance was 1.0 meter (m) for Caño Boquerón and 1.9 m for Puerto Mosquito.Assessment of biological characteristics at both sites included primary productivity calculations as well as carbon production equivalents and monthly water sampling for bacteriological and nutrient analyses. For Caño Boquerón, gross plankton primary productivity averaged 3.38 grams of oxygen per cubic meter per day (gO2/m3-d); this value was computed as the sum of net phytoplankton primary productivity (0.74 gO2/m3-d) and plankton respiration (2.64 gO2/m3-d). Net community primary productivity averaged 1.44 gO2/m3-d, and the community respiration rate averaged 8.10 gO2/m3-d, which indicates that the biological community, aside from phytoplankton, acts as a net consumer rather than a net producer of biomass. In Puerto Mosquito, gross plankton primary productivity averaged 2.07 gO2/m3-d, of which 0.39 gO2/m3-d could be ascribed to net phytoplankton primary productivity, and 1.68 gO2/m3-d could be ascribed to plankton respiration. Diel studies conducted at Puerto Mosquito reflected an average net community primary productivity of 2.43 gO2/m3-d, and the average respiration rate was 6.72 gO2/m3-d.In a bathymetric survey conducted in August 2015, the water volume for the Caño Boquerón lagoon was calculated as 967,000 cubic meters (m3), and the water volume at Puerto Mosquito was calculated as 1,182,200 m3, with an average depth of 1.5 m for Caño Boquerón and 1.8 m for Puerto Mosquito. The daily seawater exchange for Caño Boquerón and Puerto Mosquito was 13 and 5 percent of their water volumes referenced to mean sea level, respectively. A total of 20 sediment samples were processed and analyzed for cesium-137 (137Cs) and lead-210 (210Pb) radioisotopes. Analyses indicated that the sediment deposition rate at Caño Boquerón ranged from 0.32 to 0.36 centimeter per year, based on age dating analysis of 137Cs and 210Pb data; in Puerto Mosquito, the sediment deposition rate ranged from 0.26 to 0.27 centimeter per year, based on 137Cs and 210Pb data.Bacteriological analyses at Caño Boquerón and Puerto Mosquito indicated that fecal coliform and enterococci concentrations were below Puerto Rico Environmental Quality Board standards during the study. The highest concentrations of fecal coliform (22 colonies per 100 milliliters) and enterococci (9 colonies per 100 milliliters) at Caño Boquerón occurred in July, which coincided with the busiest season of vacation rentals near the lagoon. Bacteria concentrations were generally lower in Puerto Mosquito than in Caño Boquerón; maximum concentrations of fecal coliform and enterococci bacteria were measured in November 2015. The potential sources of contamination for Puerto Mosquito are limited, because it is within a conservation area.

Predicting Species-Resolved Macronutrient Acquisition during Succession in a Model Phototrophic Biofilm Using an Integrated ‘Omics Approach

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lindemann, Stephen R.; Mobberley, Jennifer M.; Cole, Jessica K.

The principles governing acquisition and interspecies exchange of nutrients in microbial communities and how those exchanges impact community productivity are poorly understood. Here, we examine energy and macronutrient acquisition in unicyanobacterial consortia for which species-resolved genome information exists for all members, allowing us to use multi-omic approaches to predict species’ abilities to acquire resources and examine expression of resource-acquisition genes during succession. Metabolic reconstruction indicated that a majority of heterotrophic community members lacked the genes required to directly acquire the inorganic nutrients provided in culture medium, suggesting high metabolic interdependency. The sole primary producer in consortium UCC-O, cyanobacterium Phormidium sp.more » OSCR, displayed declining expression of energy harvest, carbon fixation, and nitrate and sulfate reduction proteins but sharply increasing phosphate transporter expression over 28 days. Most heterotrophic members likewise exhibited signs of phosphorus starvation during succession. Though similar in their responses to phosphorus limitation, heterotrophs displayed species-specific expression of nitrogen acquisition genes. These results suggest niche partitioning around nitrogen sources may structure the community when organisms directly compete for limited phosphate. Such niche complementarity around nitrogen sources may increase community diversity and productivity in phosphate-limited phototrophic communities.« less

Predicting Species-Resolved Macronutrient Acquisition during Succession in a Model Phototrophic Biofilm Using an Integrated ‘Omics Approach

DOE PAGES

Lindemann, Stephen R.; Mobberley, Jennifer M.; Cole, Jessica K.; ...

2017-06-13

The principles governing acquisition and interspecies exchange of nutrients in microbial communities and how those exchanges impact community productivity are poorly understood. Here, we examine energy and macronutrient acquisition in unicyanobacterial consortia for which species-resolved genome information exists for all members, allowing us to use multi-omic approaches to predict species’ abilities to acquire resources and examine expression of resource-acquisition genes during succession. Metabolic reconstruction indicated that a majority of heterotrophic community members lacked the genes required to directly acquire the inorganic nutrients provided in culture medium, suggesting high metabolic interdependency. The sole primary producer in consortium UCC-O, cyanobacterium Phormidium sp.more » OSCR, displayed declining expression of energy harvest, carbon fixation, and nitrate and sulfate reduction proteins but sharply increasing phosphate transporter expression over 28 days. Most heterotrophic members likewise exhibited signs of phosphorus starvation during succession. Though similar in their responses to phosphorus limitation, heterotrophs displayed species-specific expression of nitrogen acquisition genes. These results suggest niche partitioning around nitrogen sources may structure the community when organisms directly compete for limited phosphate. Such niche complementarity around nitrogen sources may increase community diversity and productivity in phosphate-limited phototrophic communities.« less