Sample records for longer detection window

  1. Emergence of two near-infrared windows for in vivo and intraoperative SERS.

    PubMed

    Lane, Lucas A; Xue, Ruiyang; Nie, Shuming

    2018-04-06

    Two clear windows in the near-infrared (NIR) spectrum are of considerable current interest for in vivo molecular imaging and spectroscopic detection. The main rationale is that near-infrared light can penetrate biological tissues such as skin and blood more efficiently than visible light because these tissues scatter and absorb less light at longer wavelengths. The first clear window, defined as light wavelengths between 650nm and 950nm, has been shown to be far superior for in vivo and intraoperative optical imaging than visible light. The second clear window, operating in the wavelength range of 1000-1700nm, has been reported to further improve detection sensitivity, spatial resolution, and tissue penetration because tissue photon scattering and background interference are further reduced at longer wavelengths. Here we discuss recent advances in developing biocompatible plasmonic nanoparticles for in vivo and intraoperative surface-enhanced Raman scattering (SERS) in both the first and second NIR windows. In particular, a new class of 'broad-band' plasmonic nanostructures is well suited for surface Raman enhancement across a broad range of wavelengths allowing a direct comparison of detection sensitivity and tissue penetration between the two NIR window. Also, optimized and encoded SERS nanoparticles are generally nontoxic and are much brighter than near-infrared quantum dots (QDs), raising new possibilities for ultrasensitive detection of microscopic tumors and image-guided precision surgery. Copyright © 2018 Elsevier Ltd. All rights reserved.

  2. Effects of a Longer Detection Window in VHF Time-of-Arrival Lightning Detection Systems

    NASA Astrophysics Data System (ADS)

    Murphy, M.; Holle, R.; Demetriades, N.

    2003-12-01

    Lightning detection systems that operate by measuring the times of arrival (TOA) of short bursts of radiation at VHF can produce huge volumes of data. The first automated system of this kind, the NASA Kennedy Space Center LDAR network, is capable of producing one detection every 100 usec from each of seven sensors (Lennon and Maier, 1991), where each detection consists of the time and amplitude of the highest-amplitude peak observed within the 100 usec window. More modern systems have been shown to produce very detailed information with one detection every 10 usec (Rison et al., 2001). Operating such systems in real time, however, can become expensive because of the large data communications rates required. One solution to this problem is to use a longer detection window, say 500 usec. In principle, this has little or no effect on the flash detection efficiency because each flash typically produces a very large number of these VHF bursts (known as sources). By simply taking the largest-amplitude peak from every 500-usec interval instead of every 100-usec interval, we should detect the largest 20{%} of the sources that would have been detected using the 100-usec window. However, questions remain about the exact effect of a longer detection window on the source detection efficiency with distance from the network, its effects on how well flashes are represented in space, and how well the reduced information represents the parent thunderstorm. The latter issue is relevant for automated location and tracking of thunderstorm cells using data from VHF TOA lightning detection networks, as well as for understanding relationships between lightning and severe weather. References Lennon, C.L. and L.M. Maier, Lightning mapping system. Proceedings, Intl. Aerospace and Ground Conf. on Lightning and Static Elec., Cocoa Beach, Fla., NASA Conf. Pub. 3106, vol. II, pp. 89-1 - 89-10, 1991. Rison, W., P. Krehbiel, R. Thomas, T. Hamlin, J. Harlin, High time resolution lightning mapping observations of a small thunderstorm during STEPS. Eos Trans. AGU, 82 (47), Fall Meet. Suppl., Abstract AE12A-83, 2001.

  3. Oral fluid cannabinoid concentrations following controlled smoked cannabis in chronic frequent and occasional smokers.

    PubMed

    Anizan, Sebastien; Milman, Garry; Desrosiers, Nathalie; Barnes, Allan J; Gorelick, David A; Huestis, Marilyn A

    2013-10-01

    Oral fluid (OF) is an alternative biological matrix for monitoring cannabis intake in drug testing, and drugged driving (DUID) programs, but OF cannabinoid test interpretation is challenging. Controlled cannabinoid administration studies provide a scientific database for interpreting cannabinoid OF tests. We compared differences in OF cannabinoid concentrations from 19 h before to 30 h after smoking a 6.8% THC cigarette in chronic frequent and occasional cannabis smokers. OF was collected with the Statsure Saliva Sampler™ OF device. 2D-GC-MS was used to quantify cannabinoids in 357 OF specimens; 65 had inadequate OF volume within 3 h after smoking. All OF specimens were THC-positive for up to 13.5 h after smoking, without significant differences between frequent and occasional smokers over 30 h. Cannabidiol (CBD) and cannabinol (CBN) had short median last detection times (2.5-4 h for CBD and 6-8 h for CBN) in both groups. THCCOOH was detected in 25 and 212 occasional and frequent smokers' OF samples, respectively. THCCOOH provided longer detection windows than THC in all frequent smokers. As THCCOOH is not present in cannabis smoke, its presence in OF minimizes the potential for false positive results from passive environmental smoke exposure, and can identify oral THC ingestion, while OF THC cannot. THC ≥ 1 μg/L, in addition to CBD ≥ 1 μg/L or CBN ≥ 1 μg/L suggested recent cannabis intake (≤13.5 h), important for DUID cases, whereas THC ≥ 1 μg/L or THC ≥ 2 μg/L cutoffs had longer detection windows (≥30 h), important for workplace testing. THCCOOH windows of detection for chronic, frequent cannabis smokers extended beyond 30 h, while they were shorter (0-24 h) for occasional cannabis smokers.

  4. Oral fluid cannabinoid concentrations following controlled smoked cannabis in chronic frequent and occasional smokers

    PubMed Central

    Anizan, Sebastien; Milman, Garry; Desrosiers, Nathalie; Barnes, Allan J.; Gorelick, David A.; Huestis, Marilyn A.

    2013-01-01

    Background Oral fluid (OF) is an alternative biological matrix for monitoring cannabis intake in drug testing, and drugged driving (DUID) programs, but OF cannabinoid test interpretation is challenging. Controlled cannabinoid administration studies provide a scientific database for interpreting cannabinoid OF tests. Methods We compared differences in OF cannabinoid concentrations from 19h before to 30h after smoking a 6.8% THC cigarette in chronic frequent and occasional cannabis smokers. OF was collected with the Statsure Saliva Sampler™ OF device. 2D-GC-MS was used to quantify cannabinoids in 357 OF specimens; 65 had inadequate OF volume within 3h after smoking. Results All OF specimens were THC-positive for up to 13.5h after smoking, without significant differences between frequent and occasional smokers over 30h. CBD and CBN had short median last detection times (2.5–4h for CBD and 6–8h for CBN) in both groups. THCCOOH was detected in 25 and 212 occasional and frequent smokers’ OF samples, respectively. THCCOOH provided longer detection windows than THC in all frequent smokers. As THCCOOH is not present in cannabis smoke, it’s presence in OF minimizes the potential for false positive results from passive environmental smoke exposure, and can identify oral THC ingestion, while OF THC cannot. THC≥1μg/L, in addition to CBD≥1μg/L or CBN≥1μg/L suggested recent cannabis intake (≤13.5h), important for DUID cases, whereas THC≥1μg/L or THC≥2μg/L cutoffs had longer detection windows (≥30h), important for workplace testing. THCCOOH windows of detection for chronic, frequent cannabis smokers extended beyond 30 h, while they were shorter (0–24h) for occasional cannabis smokers. PMID:23954944

  5. Localization of interictal epileptic spikes with MEG: optimization of an automated beamformer screening method (SAMepi) in a diverse epilepsy population

    PubMed Central

    Scott, Jonathan M.; Robinson, Stephen E.; Holroyd, Tom; Coppola, Richard; Sato, Susumu; Inati, Sara K.

    2016-01-01

    OBJECTIVE To describe and optimize an automated beamforming technique followed by identification of locations with excess kurtosis (g2) for efficient detection and localization of interictal spikes in medically refractory epilepsy patients. METHODS Synthetic Aperture Magnetometry with g2 averaged over a sliding time window (SAMepi) was performed in 7 focal epilepsy patients and 5 healthy volunteers. The effect of varied window lengths on detection of spiking activity was evaluated. RESULTS Sliding window lengths of 0.5–10 seconds performed similarly, with 0.5 and 1 second windows detecting spiking activity in one of the 3 virtual sensor locations with highest kurtosis. These locations were concordant with the region of eventual surgical resection in these 7 patients who remained seizure free at one year. Average g2 values increased with increasing sliding window length in all subjects. In healthy volunteers kurtosis values stabilized in datasets longer than two minutes. CONCLUSIONS SAMepi using g2 averaged over 1 second sliding time windows in datasets of at least 2 minutes duration reliably identified interictal spiking and the presumed seizure focus in these 7 patients. Screening the 5 locations with highest kurtosis values for spiking activity is an efficient and accurate technique for localizing interictal activity using MEG. SIGNIFICANCE SAMepi should be applied using the parameter values and procedure described for optimal detection and localization of interictal spikes. Use of this screening procedure could significantly improve the efficiency of MEG analysis if clinically validated. PMID:27760068

  6. Sensors and Clinical Mastitis—The Quest for the Perfect Alert

    PubMed Central

    Hogeveen, Henk; Kamphuis, Claudia; Steeneveld, Wilma; Mollenhorst, Herman

    2010-01-01

    When cows on dairy farms are milked with an automatic milking system or in high capacity milking parlors, clinical mastitis (CM) cannot be adequately detected without sensors. The objective of this paper is to describe the performance demands of sensor systems to detect CM and evaluats the current performance of these sensor systems. Several detection models based on different sensors were studied in the past. When evaluating these models, three factors are important: performance (in terms of sensitivity and specificity), the time window and the similarity of the study data with real farm data. A CM detection system should offer at least a sensitivity of 80% and a specificity of 99%. The time window should not be longer than 48 hours and study circumstances should be as similar to practical farm circumstances as possible. The study design should comprise more than one farm for data collection. Since 1992, 16 peer-reviewed papers have been published with a description and evaluation of CM detection models. There is a large variation in the use of sensors and algorithms. All this makes these results not very comparable. There is a also large difference in performance between the detection models and also a large variation in time windows used and little similarity between study data. Therefore, it is difficult to compare the overall performance of the different CM detection models. The sensitivity and specificity found in the different studies could, for a large part, be explained in differences in the used time window. None of the described studies satisfied the demands for CM detection models. PMID:22163637

  7. Sensors and clinical mastitis--the quest for the perfect alert.

    PubMed

    Hogeveen, Henk; Kamphuis, Claudia; Steeneveld, Wilma; Mollenhorst, Herman

    2010-01-01

    When cows on dairy farms are milked with an automatic milking system or in high capacity milking parlors, clinical mastitis (CM) cannot be adequately detected without sensors. The objective of this paper is to describe the performance demands of sensor systems to detect CM and evaluats the current performance of these sensor systems. Several detection models based on different sensors were studied in the past. When evaluating these models, three factors are important: performance (in terms of sensitivity and specificity), the time window and the similarity of the study data with real farm data. A CM detection system should offer at least a sensitivity of 80% and a specificity of 99%. The time window should not be longer than 48 hours and study circumstances should be as similar to practical farm circumstances as possible. The study design should comprise more than one farm for data collection. Since 1992, 16 peer-reviewed papers have been published with a description and evaluation of CM detection models. There is a large variation in the use of sensors and algorithms. All this makes these results not very comparable. There is a also large difference in performance between the detection models and also a large variation in time windows used and little similarity between study data. Therefore, it is difficult to compare the overall performance of the different CM detection models. The sensitivity and specificity found in the different studies could, for a large part, be explained in differences in the used time window. None of the described studies satisfied the demands for CM detection models.

  8. Second and third NIR optical windows for imaging of bone microfractures

    NASA Astrophysics Data System (ADS)

    Sordillo, Laura A.; Pu, Yang; Sordillo, Peter P.; Budansky, Yury; Alfano, R. R.

    2014-05-01

    Microfractures in bone, secondary to repetitive stress, particularly in the lower extremities, are an important problem for military recruits and for athletes. They also may occur in those with brittle bones, such as the elderly, or in patients taking bisphosphonates for osteoporosis. Microfractures can be early predictors of major bone fracture and may be as important as changes in bone density in predicting where and how likely a major fracture will occur. Unlike major bone fractures, microfractures can be difficult to detect by conventional methods. We explored a second NIR spectral window from 1,100 nm to 1,350 nm, and a third spectral window from 1,600 nm to 1,870 nm to image microfractures through tissue media. Due to a reduction in scattering at longer NIR wavelengths, employment of the second and third NIR windows may allow for deeper penetration into tissue and higher contrast images of microfractures underneath the skin.

  9. The application of IR detector with windowing technique in the small and dim target detection

    NASA Astrophysics Data System (ADS)

    Su, Xiaofeng; Chen, Fansheng; Dong, Yucui; Cui, Kun; Huang, Sijie

    2015-04-01

    The performance of small and dim IR target detection is mostly affected by the signal to noise ratio(SNR) and signal to clutter ratio(SCR), for the MWIR especially LWIR array detector, because of the background radiation and the optical system radiation, the SCR cannot be unlimited increased by using a longer integral time, so the frame rate of the detector was mainly limited by the data readout time especially in a large-scale infrared detector, in this paper a new MWIR array detector with windowing technique was used to do the experiment, which can get a faster frame rate around the target by using the windowing mode, so the redundant information could be ignore, and the background subtraction was used to remove the fixed pattern noise and adjust the dynamic range of the target, then a local NUC(non uniformity correction) technique was proposed to improve the SCR of the target, the advantage between local NUC and global NUC was analyzed in detail, finally the multi local window frame accumulation was adopted to enhance the target further, and the SNR of the target was improved. The experiment showed the SCR of the target can improved from 1.3 to 36 at 30 frames accumulation, which make the target detection and tracking become very easily by using the new method.

  10. Proper source-receiver distance to obtain surface wave group velocity profile for flaw detection inside a concrete plate-like structure

    NASA Astrophysics Data System (ADS)

    Cheng, Chia-Chi; Hsu, Keng-Tsang; Wang, Hong-Hua; Chiang, Chih-Hung

    2018-04-01

    A technique leads to rapid flaw detection for concrete plate-like structure is realized by obtaining the group velocity dispersion profile of the fundamental antisymmetric mode of the plate (A0 mode). The depth of a delaminating crack, honeycomb or depth of weak surface layer on top of the sound concrete can all be evaluated by the change of velocity in the dispersion profile of A0 mode at the wavelength about twice of the depth. The testing method involves obtaining the A0 group slowness spectrogram produced by single test with one receiver placed away from the source of impact. The image of the spectrogram is obtained by Short-Time Fourier Transfer (STFT) and enhanced by reassigned method. The choice of window length in STFT and the ratio between impactor-receiver distance and plate thickness, d/T, is essential as the dominant surface wave response may simply a non-dispersive Rayleigh wave or following the A0 or S0 (fundamental symmetric mode) modal dispersion curve. In this study, the axisymmetric finite element model of a plate subject to transient load was constructed. The nodal vertical velocity waveforms for various distances were analyzed using various STFT window lengths. The results show, for certain d/T ratio, S0 mode would be dominant when longer window is used. The best window lengths for a d/T ratio as well as the corresponding largest wavelength which follows the A0 theoretical dispersion curve or Rayleigh wave were summarized. The information allows people to determine the proper impactor-receiver distance and analyzing window to successfully detect the depth of flaws inside a plate.

  11. Extended Detection of Amphetamine and Methamphetamine in Oral Fluid.

    PubMed

    Andås, Hilde T; Enger, Asle; Øiestad, Åse Marit L; Vindenes, Vigdis; Christophersen, Asbjørg S; Huestis, Marilyn A; Øiestad, Elisabeth L

    2016-02-01

    Amphetamine and methamphetamine are popular drugs of abuse worldwide and are important components of drug monitoring programs. Windows of detection for amphetamine and methamphetamine in oral fluid after high doses have not been investigated. Repeated high-dose ingestions are likely to cause positive samples for extended periods. Common routes of administration of amphetamine/methamphetamine in Norway are oral intake or injection. The aim of this study was to investigate windows of detection for amphetamine and methamphetamine in oral fluid from drug addicts under sustained abstinence during detoxification. Twenty-five patients admitted to a closed detoxification unit were included in this study. Oral fluid samples were collected daily in the morning and evening, and urine every morning for 10 days. A blood sample was drawn during the first 5 days after admission if the patient consented. Oral fluid results were compared with urine results to determine whether a new ingestion occurred. Oral fluid was collected with the Intercept oral fluid collection device. In-house cutoff concentrations for amphetamine and methamphetamine were 6.8 and 7.5 mcg/L, respectively, in oral fluid, and 135 and 149 mcg/L, respectively, in urine. Amphetamines were detected in 11 oral fluid, 5 urine, and 2 blood specimens from 25 patients. Patients self-reported amphetamines intake of up to 0.5-2 g daily. Windows of detection for amphetamine and methamphetamine in oral fluid were up to 8 days, longer than in urine at the applied cutoff values. These data confirm that oral fluid is a viable alternative to urine for monitoring amphetamine abuse, and that these substances might be detected in oral fluid for at least 1 week after ingestion of high doses. Such long detection times were, as far as we are aware, never reported previously for oral fluid amphetamines.

  12. Near-infrared supercontinuum laser beam source in the second and third near-infrared optical windows used to image more deeply through thick tissue as compared with images from a lamp source

    NASA Astrophysics Data System (ADS)

    Sordillo, Laura A.; Lindwasser, Lukas; Budansky, Yury; Leproux, Philippe; Alfano, Robert R.

    2015-03-01

    With the use of longer near-infrared (NIR) wavelengths, image quality can be increased due to less scattering (described by the inverse wavelength power dependence 1/λn where n≥1) and minimal absorption from water molecules. Longer NIR windows, known as the second (1100 nm to 1350 nm) and third (1600 to 1870 nm) NIR windows are utilized to penetrate more deeply into tissue media and produce high-quality images. An NIR supercontinuum (SC) laser light source, with wavelengths in the second and third NIR optical windows to image tissue provides ballistic imaging of tissue. The SC ballistic beam can penetrate depths of up to 10 mm through tissue.

  13. Flame Detector

    NASA Technical Reports Server (NTRS)

    1990-01-01

    Scientific Instruments, Inc. has now developed a second generation, commercially available instrument to detect flames in hazardous environments, typically refineries, chemical plants and offshore drilling platforms. The Model 74000 detector incorporates a sensing circuit that detects UV radiation in a 100 degree conical field of view extending as far as 250 feet from the instrument. It operates in a bandwidth that makes it virtually 'blind' to solar radiation while affording extremely high sensitivity to ultraviolet flame detection. A 'windowing' technique accurately discriminates between background UV radiation and ultraviolet emitted from an actual flame, hence the user is assured of no false alarms. Model 7410CP is a combination controller and annunciator panel designed to monitor and control as many as 24 flame detectors. *Model 74000 is no longer being manufactured.

  14. Measuring temporal summation in visual detection with a single-photon source.

    PubMed

    Holmes, Rebecca; Victora, Michelle; Wang, Ranxiao Frances; Kwiat, Paul G

    2017-11-01

    Temporal summation is an important feature of the visual system which combines visual signals that arrive at different times. Previous research estimated complete summation to last for 100ms for stimuli judged "just detectable." We measured the full range of temporal summation for much weaker stimuli using a new paradigm and a novel light source, developed in the field of quantum optics for generating small numbers of photons with precise timing characteristics and reduced variance in photon number. Dark-adapted participants judged whether a light was presented to the left or right of their fixation in each trial. In Experiment 1, stimuli contained a stream of photons delivered at a constant rate while the duration was systematically varied. Accuracy should increase with duration as long as the later photons can be integrated with the proceeding ones into a single signal. The temporal integration window was estimated as the point that performance no longer improved, and was found to be 650ms on average. In Experiment 2, the duration of the visual stimuli was kept short (100ms or <30ms) while the number of photons was varied to explore the efficiency of summation over the integration window compared to Experiment 1. There was some indication that temporal summation remains efficient over the integration window, although there is variation between individuals. The relatively long integration window measured in this study may be relevant to studies of the absolute visual threshold, i.e., tests of single-photon vision, where "single" photons should be separated by greater than the integration window to avoid summation. Copyright © 2017 Elsevier Ltd. All rights reserved.

  15. A new method for producing automated seismic bulletins: Probabilistic event detection, association, and location

    DOE PAGES

    Draelos, Timothy J.; Ballard, Sanford; Young, Christopher J.; ...

    2015-10-01

    Given a set of observations within a specified time window, a fitness value is calculated at each grid node by summing station-specific conditional fitness values. Assuming each observation was generated by a refracted P wave, these values are proportional to the conditional probabilities that each observation was generated by a seismic event at the grid node. The node with highest fitness value is accepted as a hypothetical event location, subject to some minimal fitness value, and all arrivals within a longer time window consistent with that event are associated with it. During the association step, a variety of different phasesmore » are considered. In addition, once associated with an event, an arrival is removed from further consideration. While unassociated arrivals remain, the search for other events is repeated until none are identified.« less

  16. Right-to-left-shunt detected by c-TCD using the orbital window in comparison with temporal bone windows.

    PubMed

    Kobayashi, Kazuto; Kimura, Kazumi; Iguchi, Yasuyuki; Sakai, Kenichirou; Aoki, Junya; Iwanaga, Takeshi; Shibazaki, Kensaku

    2012-01-01

    There have been some reports on right-to-left shunt as a cause of cryptogenic stroke. Although contrast transcranial Doppler (c-TCD) can detect RLS, an insufficient temporal window has occasionally restricted its applicability. Thus, we compared the rates of detecting RLS among temporal windows for the middle cerebral arteries (MCAs) and the orbital window for the internal carotid artery (ICA) on c-TCD. We used c-TCD to detect RLS in patients with suspected ischemic stroke. We enrolled patients who had both sufficient bilateral temporal windows for MCAs and a right orbital window for ICA and performed c-TCD using all three windows simultaneously. We enrolled 106 consecutive patients and identified microembolic signals (MES) in 30 (28%) of them. Among these 30 patients, 15 had MES from all 3 windows. When these 30 patients were defined as being positive for RLS, the rates of detection were 67%, 73%, and 80% from the right temporal, left temporal, and right orbital windows, respectively (P= .795). The right orbital window as well as the temporal window for c-TCD could detect RLS. Insonation from the orbital window should be useful for patients who lack temporal windows. Copyright © 2010 by the American Society of Neuroimaging.

  17. Characterization of Raman Scattering in Solid Samples with Different Particle Sizes and Elucidation on the Trends of Particle Size-Dependent Intensity Variations in Relation to Changes in the Sizes of Laser Illumination and Detection Area.

    PubMed

    Duy, Pham K; Chun, Seulah; Chung, Hoeil

    2017-11-21

    We have systematically characterized Raman scatterings in solid samples with different particle sizes and investigated subsequent trends of particle size-induced intensity variations. For this purpose, both lactose powders and pellets composed of five different particle sizes were prepared. Uniquely in this study, three spectral acquisition schemes with different sizes of laser illuminations and detection windows were employed for the evaluation, since it was expected that the experimental configuration would be another factor potentially influencing the intensity of the lactose peak, along with the particle size itself. In both samples, the distribution of Raman photons became broader with the increase in particle size, as the mean free path of laser photons, the average photon travel distance between consecutive scattering locations, became longer under this situation. When the particle size was the same, the Raman photon distribution was narrower in the pellets since the individual particles were more densely packed in a given volume (the shorter mean free path). When the size of the detection window was small, the number of photons reaching the detector decreased as the photon distribution was larger. Meanwhile, a large-window detector was able to collect the widely distributed Raman photons more effectively; therefore, the trends of intensity change with the variation in particle size were dissimilar depending on the employed spectral acquisition schemes. Overall, the Monte Carlo simulation was effective at probing the photon distribution inside the samples and helped to support the experimental observations.

  18. Remote Dynamic Earthquake Triggering in Shale Gas Basins in Canada and Implications for Triggering Mechanisms

    NASA Astrophysics Data System (ADS)

    Harrington, Rebecca M.; Liu, Yajing; Wang, Bei; Kao, Honn; Yu, Hongyu

    2017-04-01

    Here we investigate the occurrence of remote dynamic triggering in three sedimentary basins in Canada where recent fluid injection activity is correlated with increasing numbers of earthquakes. In efforts to count as many small, local earthquakes as possible for the statistical test of triggering, we apply a multi-station matched-filter detection method to continuous waveforms to detect uncataloged local earthquakes in 10-day time windows surrounding triggering mainshocks occurring between 2013-2015 with an estimated local peak ground velocity exceeding 0.01 cm/s. We count the number of earthquakes in 24-hour bins and use a statistical p-value test to determine if the changes in seismicity levels after the mainshock waves have passed are statistically significant. The p-value tests show occurrences of triggering following transient stress perturbations of < 10 kPa at all three sites that suggest local faults may remain critically stressed over periods similar to the time frame of our study ( 2 years) or longer, potentially due to maintained high pore pressures in tight shale formations following injection. The time window over which seismicity rates change varies at each site, with more delayed triggering occurring at sites where production history is longer. The observations combined with new modeling results suggest that the poroelastic response of the medium may be the dominant factor influencing instantaneous triggering, particularly in low-permeability tight shales. At sites where production history is longer and permeabilities have been increased, both pore pressure diffusion and the poroelastic response of the medium may work together to promote both instantaneous and delayed triggering. Not only does the interplay of the poroelastic response of the medium and pore pressure diffusion have implications for triggering induced earthquakes near injection sites, but it may be a plausible explanation for observations of instantaneous and delayed earthquake triggering in general.

  19. Determining the optimal window length for pattern recognition-based myoelectric control: balancing the competing effects of classification error and controller delay.

    PubMed

    Smith, Lauren H; Hargrove, Levi J; Lock, Blair A; Kuiken, Todd A

    2011-04-01

    Pattern recognition-based control of myoelectric prostheses has shown great promise in research environments, but has not been optimized for use in a clinical setting. To explore the relationship between classification error, controller delay, and real-time controllability, 13 able-bodied subjects were trained to operate a virtual upper-limb prosthesis using pattern recognition of electromyogram (EMG) signals. Classification error and controller delay were varied by training different classifiers with a variety of analysis window lengths ranging from 50 to 550 ms and either two or four EMG input channels. Offline analysis showed that classification error decreased with longer window lengths (p < 0.01 ). Real-time controllability was evaluated with the target achievement control (TAC) test, which prompted users to maneuver the virtual prosthesis into various target postures. The results indicated that user performance improved with lower classification error (p < 0.01 ) and was reduced with longer controller delay (p < 0.01 ), as determined by the window length. Therefore, both of these effects should be considered when choosing a window length; it may be beneficial to increase the window length if this results in a reduced classification error, despite the corresponding increase in controller delay. For the system employed in this study, the optimal window length was found to be between 150 and 250 ms, which is within acceptable controller delays for conventional multistate amplitude controllers.

  20. Detection of Early Ischemic Changes in Noncontrast CT Head Improved with "Stroke Windows".

    PubMed

    Mainali, Shraddha; Wahba, Mervat; Elijovich, Lucas

    2014-01-01

    Introduction. Noncontrast head CT (NCCT) is the standard radiologic test for patients presenting with acute stroke. Early ischemic changes (EIC) are often overlooked on initial NCCT. We determine the sensitivity and specificity of improved EIC detection by a standardized method of image evaluation (Stroke Windows). Methods. We performed a retrospective chart review to identify patients with acute ischemic stroke who had NCCT at presentation. EIC was defined by the presence of hyperdense MCA/basilar artery sign; sulcal effacement; basal ganglia/subcortical hypodensity; and loss of cortical gray-white differentiation. NCCT was reviewed with standard window settings and with specialized Stroke Windows. Results. Fifty patients (42% females, 58% males) with a mean NIHSS of 13.4 were identified. EIC was detected in 9 patients with standard windows, while EIC was detected using Stroke Windows in 35 patients (18% versus 70%; P < 0.0001). Hyperdense MCA sign was the most commonly reported EIC; it was better detected with Stroke Windows (14% and 36%; P < 0.0198). Detection of the remaining EIC also improved with Stroke Windows (6% and 46%; P < 0.0001). Conclusions. Detection of EIC has important implications in diagnosis and treatment of acute ischemic stroke. Utilization of Stroke Windows significantly improved detection of EIC.

  1. Acute hepatitis B virus window-period blood donations detected by individual-donation nucleic acid testing: a report on the first two cases found and interdicted in Spain.

    PubMed

    González, Rocio; Echevarria, José Manuel; Avellón, Ana; Barea, Luisa; Castro, Emma

    2006-07-01

    Mathematical models predict that, in Spain, a significant number of blood units will be obtained during the window period of the hepatitis B virus (HBV) infection. Routine nucleic acid testing (NAT) on individual blood units may provide experimental data to evaluate such a theoretical risk. Between February and July 2005, a total of 34,631 individual units were screened for HBV DNA by a multiplex transcription-mediated amplification (TMA) test. Units that repeatedly reacted in the test, but did not react for HBV surface antigen (HBsAg), were submitted to additional testing by both molecular and conventional assays, and the donors were recalled for follow-up studies and the collection of clinical and epidemiologic data. Confirmatory testing and follow-up studies identified 2 blood units donated during the HBV infection window period (1/17,316 units studied). Sequencing of amplification products obtained by nested polymerase chain reaction (n-PCR) revealed two HBV strains from genotypes D/ayw3 and F/adw4q-, but did not identify HBsAg mutants. The HBV DNA concentration in the index donations was estimated to be below the n-PCR detection level (180 IU/mL), in both cases. One donor developed acute hepatitis 2 months after donating blood, but the other remained asymptomatic and displayed normal alanine aminotransferase levels at follow-up. The HBV infection window period is a real issue in the setting of Spanish blood transfusions. NAT of individual units by TMA would make a significant contribution to improving the safety of the blood supply in Spain. Additional studies involving a larger number of units and longer periods of time are required, however, to ascertain the true incidence of the problem in this country.

  2. Development and validation of an ultra-fast and sensitive microflow liquid chromatography-tandem mass spectrometry (MFLC-MS/MS) method for quantification of LSD and its metabolites in plasma and application to a controlled LSD administration study in humans.

    PubMed

    Steuer, Andrea E; Poetzsch, Michael; Stock, Lorena; Eisenbeiss, Lisa; Schmid, Yasmin; Liechti, Matthias E; Kraemer, Thomas

    2017-05-01

    Lysergic acid diethylamide (LSD) is a semi-synthetic hallucinogen that has gained popularity as a recreational drug and has been investigated as an adjunct to psychotherapy. Analysis of LSD represents a major challenge in forensic toxicology due to its instability, low drug concentrations, and short detection windows in biological samples. A new, fast, and sensitive microflow liquid chromatography (MFLC) tandem mass spectrometry method for the validated quantification of LSD, iso-LSD, 2-oxo 3-hydroxy-LSD (oxo-HO-LSD), and N-desmethyl-LSD (nor-LSD) was developed in plasma and applied to a controlled pharmacokinetic (PK) study in humans to test whether LSD metabolites would offer for longer detection windows. Five hundred microlitres of plasma were extracted by solid phase extraction. Analysis was performed on a Sciex Eksigent MFLC system coupled to a Sciex 5500 QTrap. The method was validated according to (inter)-national guidelines. MFLC allowed for separation of the mentioned analytes within 3 minutes and limits of quantification of 0.01 ng/mL. Validation criteria were fulfilled for all analytes. PK data could be calculated for LSD, iso-LSD, and oxo-HO-LSD in all participants. Additionally, hydroxy-LSD (HO-LSD) and HO-LSD glucuronide could be qualitatively detected and PK determined in 11 and 8 subjects, respectively. Nor-LSD was only sporadically detected. Elimination half-lives of iso-LSD (median 12 h) and LSD metabolites (median 9, 7.4, 12, and 11 h for oxo-HO-LSD, HO-LSD, HO-LSD-gluc, and nor-LSD, respectively) exceeded those of LSD (median 4.2 h). However, screening for metabolites to increase detection windows in plasma seems not to be constructive due to their very low concentrations. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

  3. Systematic search for wide periodic windows and bounds for the set of regular parameters for the quadratic map.

    PubMed

    Galias, Zbigniew

    2017-05-01

    An efficient method to find positions of periodic windows for the quadratic map f(x)=ax(1-x) and a heuristic algorithm to locate the majority of wide periodic windows are proposed. Accurate rigorous bounds of positions of all periodic windows with periods below 37 and the majority of wide periodic windows with longer periods are found. Based on these results, we prove that the measure of the set of regular parameters in the interval [3,4] is above 0.613960137. The properties of periodic windows are studied numerically. The results of the analysis are used to estimate that the true value of the measure of the set of regular parameters is close to 0.6139603.

  4. 2.5-month-old infants' reasoning about when objects should and should not be occluded.

    PubMed

    Aguiar, A; Baillargeon, R

    1999-09-01

    The present research examined 2.5-month-old infants' reasoning about occlusion events. Three experiments investigated infants' ability to predict whether an object should remain continuously hidden or become temporarily visible when passing behind an occluder with an opening in its midsection. In Experiment 1, the infants were habituated to a short toy mouse that moved back and forth behind a screen. Next, the infants saw two test events that were identical to the habituation event except that a portion of the screen's midsection was removed to create a large window. In one event (high-window event), the window extended from the screen's upper edge; the mouse was shorter than the bottom of the window and thus did not become visible when passing behind the screen. In the other event (low-window event), the window extended from the screen's lower edge; although the mouse was shorter than the top of the window and hence should have become fully visible when passing behind the screen, it never appeared in the window. The infants tended to look equally at the high- and low-window events, suggesting that they were not surprised when the mouse failed to appear in the low window. However, positive results were obtained in Experiment 2 when the low-window event was modified: a portion of the screen above the window was removed so that the left and right sections of the screen were no longer connected (two-screens event). The infants looked reliably longer at the two-screens than at the high-window event. Together, the results of Experiments 1 and 2 suggested that, at 2.5 months of age, infants possess only very limited expectations about when objects should and should not be occluded. Specifically, infants expect objects (1) to become visible when passing between occluders and (2) to remain hidden when passing behind occluders, irrespective of whether these have openings extending from their upper or lower edges. Experiment 3 provided support for this interpretation. The implications of these findings for models of the origins and development of infants' knowledge about occlusion events are discussed. Copyright 1999 Academic Press.

  5. Optical-domain subsampling for data efficient depth ranging in Fourier-domain optical coherence tomography

    PubMed Central

    Siddiqui, Meena; Vakoc, Benjamin J.

    2012-01-01

    Recent advances in optical coherence tomography (OCT) have led to higher-speed sources that support imaging over longer depth ranges. Limitations in the bandwidth of state-of-the-art acquisition electronics, however, prevent adoption of these advances into the clinical applications. Here, we introduce optical-domain subsampling as a method for imaging at high-speeds and over extended depth ranges but with a lower acquisition bandwidth than that required using conventional approaches. Optically subsampled laser sources utilize a discrete set of wavelengths to alias fringe signals along an extended depth range into a bandwidth limited frequency window. By detecting the complex fringe signals and under the assumption of a depth-constrained signal, optical-domain subsampling enables recovery of the depth-resolved scattering signal without overlapping artifacts from this bandwidth-limited window. We highlight key principles behind optical-domain subsampled imaging, and demonstrate this principle experimentally using a polygon-filter based swept-source laser that includes an intra-cavity Fabry-Perot (FP) etalon. PMID:23038343

  6. Calibration of the Total and Static Pressure Transducers in the DSTO Transonic Wind Tunnel

    DTIC Science & Technology

    2010-08-01

    handled by the ActiveX control MSCOMM32.OCX which is not part of the Microsoft Windows operating system. It is, however, included as part of the...implemented new measures to register ActiveX controls in its Windows suite of operating systems, which has made the above file obsolete and it could no...longer be used if the Windows operating system were updated. If this is the case, then the new version of ActiveX control files can be installed using

  7. Growth hormone doping in sports: a critical review of use and detection strategies.

    PubMed

    Baumann, Gerhard P

    2012-04-01

    GH is believed to be widely employed in sports as a performance-enhancing substance. Its use in athletic competition is banned by the World Anti-Doping Agency, and athletes are required to submit to testing for GH exposure. Detection of GH doping is challenging for several reasons including identity/similarity of exogenous to endogenous GH, short half-life, complex and fluctuating secretory dynamics of GH, and a very low urinary excretion rate. The detection test currently in use (GH isoform test) exploits the difference between recombinant GH (pure 22K-GH) and the heterogeneous nature of endogenous GH (several isoforms). Its main limitation is the short window of opportunity for detection (~12-24 h after the last GH dose). A second test to be implemented soon (the biomarker test) is based on stimulation of IGF-I and collagen III synthesis by GH. It has a longer window of opportunity (1-2 wk) but is less specific and presents a variety of technical challenges. GH doping in a larger sense also includes doping with GH secretagogues and IGF-I and its analogs. The scientific evidence for the ergogenicity of GH is weak, a fact that is not widely appreciated in athletic circles or by the general public. Also insufficiently appreciated is the risk of serious health consequences associated with high-dose, prolonged GH use. This review discusses the GH biology relevant to GH doping; the virtues and limitations of detection tests in blood, urine, and saliva; secretagogue efficacy; IGF-I doping; and information about the effectiveness of GH as a performance-enhancing agent.

  8. Serum Acetaminophen Protein Adduct Concentrations in Pediatric Emergency Department Patients.

    PubMed

    Heard, Kennon; Anderson, Victoria; Dart, Richard C; Kile, Deidre; Lavonas, Eric J; Green, Jody L

    2017-04-01

    Acetaminophen toxicity is a common cause of pediatric liver failure. The diagnosis may be limited by the short window of detection of acetaminophen in serum. Recently acetaminophen protein adducts (APAP-CYS) have been used as a biomarker with a longer duration of detection. The objective of this study was to describe the serum concentrations of APAP-CYS in pediatric patients with and without reported therapeutic acetaminophen exposure. A cross-sectional study of children age 1 to <12 years presenting to a pediatric emergency department. Subjects were stratified by recent acetaminophen use and had serum APAP-CYS measured using LC/MS. One hundred patients were enrolled. All of the patients whose caregivers denied acetaminophen exposure had nondetectable APAP-CYS. Fifty-two percent of subjects who were reported to have taken acetaminophen in the preceding 2 weeks had detectable serum APAP-CYS. The APAP-CYS concentrations were positively correlated with higher overall dose and more recent ingestion. APAP-CYS is detectable in the majority of children taking acetaminophen and not detected in the majority of children who are not exposed to acetaminophen.

  9. Scale up of large ALON® and spinel windows

    NASA Astrophysics Data System (ADS)

    Goldman, Lee M.; Kashalikar, Uday; Ramisetty, Mohan; Jha, Santosh; Sastri, Suri

    2017-05-01

    Aluminum Oxynitride (ALON® Transparent Ceramic) and Magnesia Aluminate Spinel (Spinel) combine broadband transparency with excellent mechanical properties. Their cubic structure means that they are transparent in their polycrystalline form, allowing them to be manufactured by conventional powder processing techniques. Surmet has scaled up its ALON® production capability to produce and deliver windows as large as 4.4 sq ft. We have also produced our first 6 sq ft window. We are in the process of producing 7 sq ft ALON® window blanks for armor applications; and scale up to even larger, high optical quality blanks for Recce window applications is underway. Surmet also produces spinel for customers that require superior transmission at the longer wavelengths in the mid wave infra-red (MWIR). Spinel windows have been limited to smaller sizes than have been achieved with ALON. To date the largest spinel window produced is 11x18-in, and windows 14x20-in size are currently in process. Surmet is now scaling up its spinel processing capability to produce high quality window blanks as large as 19x27-in for sensor applications.

  10. Short wavelength infrared optical windows for evaluation of benign and malignant tissues

    NASA Astrophysics Data System (ADS)

    Sordillo, Diana C.; Sordillo, Laura A.; Sordillo, Peter P.; Shi, Lingyan; Alfano, Robert R.

    2017-04-01

    There are three short wavelength infrared (SWIR) optical windows outside the conventionally used first near-infrared (NIR) window (650 to 950 nm). They occur in the 1000- to 2500-nm range and may be considered second, third, and fourth NIR windows. The second (1100 to 1350 nm) and third windows (1600 to 1870 nm) are now being explored through label-free linear and multiphoton imaging. The fourth window (2100 to 2350 nm) has been mostly ignored because of water absorption and the absence of sensitive detectors and ultrafast lasers. With the advent of new technology, use of window IV is now possible. Absorption and scattering properties of light through breast and prostate cancer, bone, lipids, and intralipid solutions at these windows were investigated. We found that breast and prostate cancer and bone have longer total attenuation lengths at NIR windows III and IV, whereas fatty tissues and intralipid have longest lengths at windows II and III. Since collagen is the major chromophore at 2100 and 2350 nm, window IV could be especially valuable in evaluating cancers and boney tissues, whereas windows II and III may be more useful for tissues with high lipid content. SWIR windows may be utilized as additional optical tools for the evaluation of collagen in tissues.

  11. Short wavelength infrared optical windows for evaluation of benign and malignant tissues.

    PubMed

    Sordillo, Diana C; Sordillo, Laura A; Sordillo, Peter P; Shi, Lingyan; Alfano, Robert R

    2017-04-01

    There are three short wavelength infrared (SWIR) optical windows outside the conventionally used first near-infrared (NIR) window (650 to 950 nm). They occur in the 1000- to 2500-nm range and may be considered second, third, and fourth NIR windows. The second (1100 to 1350 nm) and third windows (1600 to 1870 nm) are now being explored through label-free linear and multiphoton imaging. The fourth window (2100 to 2350 nm) has been mostly ignored because of water absorption and the absence of sensitive detectors and ultrafast lasers. With the advent of new technology, use of window IV is now possible. Absorption and scattering properties of light through breast and prostate cancer, bone, lipids, and intralipid solutions at these windows were investigated. We found that breast and prostate cancer and bone have longer total attenuation lengths at NIR windows III and IV, whereas fatty tissues and intralipid have longest lengths at windows II and III. Since collagen is the major chromophore at 2100 and 2350 nm, window IV could be especially valuable in evaluating cancers and boney tissues, whereas windows II and III may be more useful for tissues with high lipid content. SWIR windows may be utilized as additional optical tools for the evaluation of collagen in tissues.

  12. Dip-dependent variations in LFE duration during ETS events

    NASA Astrophysics Data System (ADS)

    Chestler, S.; Creager, K.; Ghosh, A.

    2015-12-01

    Using data from the Array of Arrays experiment, we create a new, more spatially complete catalog of LFEs beneath the Olympic Peninsula, WA. Using stacked waveforms produced by stacking 1-minute windows of data from each array over the slowness with the greatest power [Ghosh et al., 2012], we pick out peaks in tremor activity that are consistent over multiple arrays. These peaks are potential LFE detections. Fifteen-second windows of raw data centered on each peak are scanned through time. If the waveform repeats, the detection is used as a new LFE family. Template waveforms for each family are created by stacking all windows that correlate with the initial detection. During an ETS event, activity at a given point on the plate interface (i.e. the activity of an LFE family) typically lasts for 3.5 (downdip) to 5 days (updip). Activity generally begins with a flurry of LFEs lasting 8 hours (downdip) to 20 hours (updip) followed by many short bursts of activity separated by 5 hours or more. Updip families have more bursts (5-10) than downdip families (2-5 bursts). The later bursts often occur during times of encouraging tidal shear stress, while the initial flurries have no significant correlation with tides. While updip LFE families are more active during ETS events than downdip families, they seldom light up between ETS events, which only occur every 12-14 months. On the other hand, downdip LFE families are active much more frequently during the year; the most down-dip families exhibit activity every week or so. Because updip families are rarely active between ETS events, it is possible that little stress is released updip during inter-ETS time periods. Hence during ETS events more stress needs to be released updip than downdip, consistent with the longer-duration activity of updip LFE families.

  13. A Supervised Approach to Windowing Detection on Dynamic Networks

    DTIC Science & Technology

    2017-07-01

    A supervised approach to windowing detection on dynamic networks Benjamin Fish University of Illinois at Chicago 1200 W. Harrison St. Chicago...Using this framework, we introduce windowing algorithms that take a supervised approach : they leverage ground truth on training data to find a good...windowing of the test data. We compare the supervised approach to previous approaches and several baselines on real data. ACM Reference format: Benjamin

  14. Detection of License Plate using Sliding Window, Histogram of Oriented Gradient, and Support Vector Machines Method

    NASA Astrophysics Data System (ADS)

    Astawa, INGA; Gusti Ngurah Bagus Caturbawa, I.; Made Sajayasa, I.; Dwi Suta Atmaja, I. Made Ari

    2018-01-01

    The license plate recognition usually used as part of system such as parking system. License plate detection considered as the most important step in the license plate recognition system. We propose methods that can be used to detect the vehicle plate on mobile phone. In this paper, we used Sliding Window, Histogram of Oriented Gradient (HOG), and Support Vector Machines (SVM) method to license plate detection so it will increase the detection level even though the image is not in a good quality. The image proceed by Sliding Window method in order to find plate position. Feature extraction in every window movement had been done by HOG and SVM method. Good result had shown in this research, which is 96% of accuracy.

  15. Optimal pulse design for communication-oriented slow-light pulse detection.

    PubMed

    Stenner, Michael D; Neifeld, Mark A

    2008-01-21

    We present techniques for designing pulses for linear slow-light delay systems which are optimal in the sense that they maximize the signal-to-noise ratio (SNR) and signal-to-noise-plus-interference ratio (SNIR) of the detected pulse energy. Given a communication model in which input pulses are created in a finite temporal window and output pulse energy in measured in a temporally-offset output window, the SNIR-optimal pulses achieve typical improvements of 10 dB compared to traditional pulse shapes for a given output window offset. Alternatively, for fixed SNR or SNIR, window offset (detection delay) can be increased by 0.3 times the window width. This approach also invites a communication-based model for delay and signal fidelity.

  16. A longer vernal window: the role of winter coldness and snowpack in driving spring transitions and lags.

    PubMed

    Contosta, Alexandra R; Adolph, Alden; Burchsted, Denise; Burakowski, Elizabeth; Green, Mark; Guerra, David; Albert, Mary; Dibb, Jack; Martin, Mary; McDowell, William H; Routhier, Michael; Wake, Cameron; Whitaker, Rachel; Wollheim, Wilfred

    2017-04-01

    Climate change is altering the timing and duration of the vernal window, a period that marks the end of winter and the start of the growing season when rapid transitions in ecosystem energy, water, nutrient, and carbon dynamics take place. Research on this period typically captures only a portion of the ecosystem in transition and focuses largely on the dates by which the system wakes up. Previous work has not addressed lags between transitions that represent delays in energy, water, nutrient, and carbon flows. The objectives of this study were to establish the sequence of physical and biogeochemical transitions and lags during the vernal window period and to understand how climate change may alter them. We synthesized observations from a statewide sensor network in New Hampshire, USA, that concurrently monitored climate, snow, soils, and streams over a three-year period and supplemented these observations with climate reanalysis data, snow data assimilation model output, and satellite spectral data. We found that some of the transitions that occurred within the vernal window were sequential, with air temperatures warming prior to snow melt, which preceded forest canopy closure. Other transitions were simultaneous with one another and had zero-length lags, such as snowpack disappearance, rapid soil warming, and peak stream discharge. We modeled lags as a function of both winter coldness and snow depth, both of which are expected to decline with climate change. Warmer winters with less snow resulted in longer lags and a more protracted vernal window. This lengthening of individual lags and of the entire vernal window carries important consequences for the thermodynamics and biogeochemistry of ecosystems, both during the winter-to-spring transition and throughout the rest of the year. © 2016 The Authors Global Change Biology Published by John Wiley & Sons Ltd.

  17. Switchable Materials for Smart Windows.

    PubMed

    Wang, Yang; Runnerstrom, Evan L; Milliron, Delia J

    2016-06-07

    This article reviews the basic principles of and recent developments in electrochromic, photochromic, and thermochromic materials for applications in smart windows. Compared with current static windows, smart windows can dynamically modulate the transmittance of solar irradiation based on weather conditions and personal preferences, thus simultaneously improving building energy efficiency and indoor human comfort. Although some smart windows are commercially available, their widespread implementation has not yet been realized. Recent advances in nanostructured materials provide new opportunities for next-generation smart window technology owing to their unique structure-property relations. Nanomaterials can provide enhanced coloration efficiency, faster switching kinetics, and longer lifetime. In addition, their compatibility with solution processing enables low-cost and high-throughput fabrication. This review also discusses the importance of dual-band modulation of visible and near-infrared (NIR) light, as nearly 50% of solar energy lies in the NIR region. Some latest results show that solution-processable nanostructured systems can selectively modulate the NIR light without affecting the visible transmittance, thus reducing energy consumption by air conditioning, heating, and artificial lighting.

  18. Oral Fluid Cocaine and Benzoylecgonine Concentrations Following Controlled Intravenous Cocaine Administration

    PubMed Central

    Ellefsen, Kayla N.; Concheiro, Marta; Pirard, Sandrine; Gorelick, David A.; Huestis, Marilyn A.

    2016-01-01

    Limited oral fluid (OF) pharmacokinetic data collected with commercially available collection devices after controlled cocaine administration hinder OF result interpretations. Ten cocaine-using adults provided OF, collected with Oral-Eze® (OE) and StatSure Saliva Sampler™ (SS) devices, an hour prior to and up to 69 h after 25 mg intravenous (IV) cocaine administration. Cocaine and benzoylecgonine (BE) were quantified by a validated 2D-GC-MS method. Large inter-subject variability was observed. Cocaine was detected in OF in the first 0.17 h sample after IV administration, with much more rapid elimination than BE. OE median observed Cmax (range) was 932 (394–1,574) μg/L for cocaine and 248 (96.9–953) μg/L for BE. SS median (range) observed cocaine and BE Cmax trended lower at 732 (83.3–1,892) μg/L and 360 (77.2–836) μg/L, respectively. OE and SS cocaine OF detection times were 12.5 and 6.5 h and for BE 30.5 and 28.0 h, respectively at 1 μg/L. There were no significant pharmacokinetic differences between OE and SS OF collection devices, except cocaine half-life was significantly shorter in SS OF specimens. This difference could be attributed to differences in stabilizing buffers present in OF collection devices, which may affect cocaine stability in OF specimens, or decreased recovery from collection pads. Both OE and SS OF collection devices were effective in monitoring cocaine and metabolite concentrations with similar detection windows. Furthermore, we demonstrated that different confirmatory OF cutoffs can be selected to produce shorter or longer cocaine and metabolite detection windows to address specific needs of clinical and forensic drug testing programs. PMID:26851651

  19. Transmission in near-infrared optical windows for deep brain imaging.

    PubMed

    Shi, Lingyan; Sordillo, Laura A; Rodríguez-Contreras, Adrián; Alfano, Robert

    2016-01-01

    Near-infrared (NIR) radiation has been employed using one- and two-photon excitation of fluorescence imaging at wavelengths 650-950 nm (optical window I) for deep brain imaging; however, longer wavelengths in NIR have been overlooked due to a lack of suitable NIR-low band gap semiconductor imaging detectors and/or femtosecond laser sources. This research introduces three new optical windows in NIR and demonstrates their potential for deep brain tissue imaging. The transmittances are measured in rat brain tissue in the second (II, 1,100-1,350 nm), third (III, 1,600-1,870 nm), and fourth (IV, centered at 2,200 nm) NIR optical tissue windows. The relationship between transmission and tissue thickness is measured and compared with the theory. Due to a reduction in scattering and minimal absorption, window III is shown to be the best for deep brain imaging, and windows II and IV show similar but better potential for deep imaging than window I. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  20. Seeing Emotion with Your Ears: Emotional Prosody Implicitly Guides Visual Attention to Faces

    PubMed Central

    Rigoulot, Simon; Pell, Marc D.

    2012-01-01

    Interpersonal communication involves the processing of multimodal emotional cues, particularly facial expressions (visual modality) and emotional speech prosody (auditory modality) which can interact during information processing. Here, we investigated whether the implicit processing of emotional prosody systematically influences gaze behavior to facial expressions of emotion. We analyzed the eye movements of 31 participants as they scanned a visual array of four emotional faces portraying fear, anger, happiness, and neutrality, while listening to an emotionally-inflected pseudo-utterance (Someone migged the pazing) uttered in a congruent or incongruent tone. Participants heard the emotional utterance during the first 1250 milliseconds of a five-second visual array and then performed an immediate recall decision about the face they had just seen. The frequency and duration of first saccades and of total looks in three temporal windows ([0–1250 ms], [1250–2500 ms], [2500–5000 ms]) were analyzed according to the emotional content of faces and voices. Results showed that participants looked longer and more frequently at faces that matched the prosody in all three time windows (emotion congruency effect), although this effect was often emotion-specific (with greatest effects for fear). Effects of prosody on visual attention to faces persisted over time and could be detected long after the auditory information was no longer present. These data imply that emotional prosody is processed automatically during communication and that these cues play a critical role in how humans respond to related visual cues in the environment, such as facial expressions. PMID:22303454

  1. Conjugated polymer sensors built on pi-extended borasiloxane cages.

    PubMed

    Liu, Wenjun; Pink, Maren; Lee, Dongwhan

    2009-06-24

    An efficient 2 + 2 cyclocondensation with dihydroxysilane converted simple arylboronic acids to bifunctional borasiloxane cage molecules, which were subsequently electropolymerized to furnish air-stable thin films. The extended [p,pi]-conjugation that defines the rigid backbone of this new conjugated polymer (CP) motif gives rise to longer-wavelength UV-vis transitions upon oxidative doping, the spectral window and intensity of which can be modified by interaction with Lewis basic reagents. Notably, this boron-containing CP undergoes a rapid and reversible color change from green to orange upon exposure to volatile amine samples under ambient conditions. This direct naked-eye detection scheme can best be explained by invoking the reversible B-N dative bond formation that profoundly influences the p-pi* orbital overlap.

  2. Comparing on-road real-time simultaneous in-cabin and outdoor particulate and gaseous concentrations for a range of ventilation scenarios

    NASA Astrophysics Data System (ADS)

    Leavey, Anna; Reed, Nathan; Patel, Sameer; Bradley, Kevin; Kulkarni, Pramod; Biswas, Pratim

    2017-10-01

    Advanced automobile technology, developed infrastructure, and changing economic markets have resulted in increasing commute times. Traffic is a major source of harmful pollutants and consequently daily peak exposures tend to occur near roadways or while travelling on them. The objective of this study was to measure simultaneous real-time particulate matter (particle numbers, lung-deposited surface area, PM2.5, particle number size distributions) and CO concentrations outside and in-cabin of an on-road car during regular commutes to and from work. Data was collected for different ventilation parameters (windows open or closed, fan on, AC on), whilst travelling along different road-types with varying traffic densities. Multiple predictor variables were examined using linear mixed-effects models. Ambient pollutants (NOx, PM2.5, CO) and meteorological variables (wind speed, temperature, relative humidity, dew point) explained 5-44% of outdoor pollutant variability, while the time spent travelling behind a bus was statistically significant for PM2.5, lung-deposited SA, and CO (adj-R2 values = 0.12, 0.10, 0.13). The geometric mean diameter (GMD) for outdoor aerosol was 34 nm. Larger cabin GMDs were observed when windows were closed compared to open (b = 4.3, p-value = <0.01). When windows were open, cabin total aerosol concentrations tracked those outdoors. With windows closed, the pollutants took longer to enter the vehicle cabin, but also longer to exit it. Concentrations of pollutants in cabin were influenced by outdoor concentrations, ambient temperature, and the window/ventilation parameters. As expected, particle number concentrations were impacted the most by changes to window position/ventilation, and PM2.5 the least. Car drivers can expect their highest exposures when driving with windows open or the fan on, and their lowest exposures during windows closed or the AC on. Final linear mixed-effects models could explain between 88 and 97% of cabin pollutant concentration variability. An individual may control their commuting exposure by applying dynamic behavior modification to adapt to changing pollutant scenarios.

  3. Comparing on-road real-time simultaneous in-cabin and outdoor particulate and gaseous concentrations for a range of ventilation scenarios

    PubMed Central

    Leavey, Anna; Reed, Nathan; Patel, Sameer; Bradley, Kevin; Kulkarni, Pramod; Biswas, Pratim

    2017-01-01

    Advanced automobile technology, developed infrastructure, and changing economic markets have resulted in increasing commute times. Traffic is a major source of harmful pollutants and consequently daily peak exposures tend to occur near roadways or while traveling on them. The objective of this study was to measure simultaneous real-time particulate matter (particle numbers, lung-deposited surface area, PM2.5, particle number size distributions) and CO concentrations outside and in-cabin of an on-road car during regular commutes to and from work. Data was collected for different ventilation parameters (windows open or closed, fan on, AC on), whilst traveling along different road-types with varying traffic densities. Multiple predictor variables were examined using linear mixed-effects models. Ambient pollutants (NOx, PM2.5, CO) and meteorological variables (wind speed, temperature, relative humidity, dew point) explained 5–44% of outdoor pollutant variability, while the time spent travelling behind a bus was statistically significant for PM2.5, lung-deposited SA, and CO (adj-R2 values = 0.12, 0.10, 0.13). The geometric mean diameter (GMD) for outdoor aerosol was 34 nm. Larger cabin GMDs were observed when windows were closed compared to open (b = 4.3, p-value = <0.01). When windows were open, cabin total aerosol concentrations tracked those outdoors. With windows closed, the pollutants took longer to enter the vehicle cabin, but also longer to exit it. Concentrations of pollutants in cabin were influenced by outdoor concentrations, ambient temperature, and the window/ventilation parameters. As expected, particle number concentrations were impacted the most by changes to window position / ventilation, and PM2.5 the least. Car drivers can expect their highest exposures when driving with windows open or the fan on, and their lowest exposures during windows closed or the AC on. Final linear mixed-effects models could explain between 88–97% of cabin pollutant concentration variability. An individual may control their commuting exposure by applying dynamic behavior modification to adapt to changing pollutant scenarios. PMID:29284988

  4. Comparing on-road real-time simultaneous in-cabin and outdoor particulate and gaseous concentrations for a range of ventilation scenarios.

    PubMed

    Leavey, Anna; Reed, Nathan; Patel, Sameer; Bradley, Kevin; Kulkarni, Pramod; Biswas, Pratim

    2017-10-01

    Advanced automobile technology, developed infrastructure, and changing economic markets have resulted in increasing commute times. Traffic is a major source of harmful pollutants and consequently daily peak exposures tend to occur near roadways or while traveling on them. The objective of this study was to measure simultaneous real-time particulate matter (particle numbers, lung-deposited surface area, PM 2.5 , particle number size distributions) and CO concentrations outside and in-cabin of an on-road car during regular commutes to and from work. Data was collected for different ventilation parameters (windows open or closed, fan on, AC on), whilst traveling along different road-types with varying traffic densities. Multiple predictor variables were examined using linear mixed-effects models. Ambient pollutants (NO x , PM 2.5 , CO) and meteorological variables (wind speed, temperature, relative humidity, dew point) explained 5-44% of outdoor pollutant variability, while the time spent travelling behind a bus was statistically significant for PM 2.5, lung-deposited SA, and CO (adj-R 2 values = 0.12, 0.10, 0.13). The geometric mean diameter (GMD) for outdoor aerosol was 34 nm. Larger cabin GMDs were observed when windows were closed compared to open (b = 4.3, p-value = <0.01). When windows were open, cabin total aerosol concentrations tracked those outdoors. With windows closed, the pollutants took longer to enter the vehicle cabin, but also longer to exit it. Concentrations of pollutants in cabin were influenced by outdoor concentrations, ambient temperature, and the window/ventilation parameters. As expected, particle number concentrations were impacted the most by changes to window position / ventilation, and PM 2.5 the least. Car drivers can expect their highest exposures when driving with windows open or the fan on, and their lowest exposures during windows closed or the AC on. Final linear mixed-effects models could explain between 88-97% of cabin pollutant concentration variability. An individual may control their commuting exposure by applying dynamic behavior modification to adapt to changing pollutant scenarios.

  5. Tuning the emission of aqueous Cu:ZnSe quantum dots to yellow light window

    NASA Astrophysics Data System (ADS)

    Wang, Chunlei; Hu, Zhiyang; Xu, Shuhong; Wang, Yanbin; Zhao, Zengxia; Wang, Zhuyuan; Cui, Yiping

    2015-07-01

    Synthesis of internally doped Cu:ZnSe QDs in an aqueous solution still suffers from narrow tunable emissions from the blue to green light window. In this work, we extended the emission window of aqueous Cu:ZnSe QDs to the yellow light window. Our results show that high solution pH, multiple injections of Zn precursors, and nucleation doping strategy are three key factors for preparing yellow emitted Cu:ZnSe QDs. All these factors can depress the reactivity of CuSe nuclei and Zn monomers, promoting ZnSe growth outside CuSe nuclei rather than form ZnSe nuclei separately. With increased ZnSe QD size, the conduction band and nearby trap state energy levels shift to higher energy sites, causing Cu:ZnSe QDs to have a much longer emission.

  6. The origin of blue-green window and the propagation of radiation in ocean waters

    NASA Astrophysics Data System (ADS)

    Reghunath, A. T.; Venkataramanan, V.; Suviseshamuthu, D. Victor; Krishnamohan, R.; Prasad, B. Raghavendra

    1991-01-01

    A review of the present knowledge about the origin of blue-green window in the attenuation spectrum of ocean waters is presented. The various physical mechanisms which contribute to the formation of the window are dealt separately and discussed. The typical values of attenuation coefficient arising out of the various processes are compiled to obtain the total beam attenuation coefficient. These values are then compared with measured values of attenuation coefficient for ocean waters collected from Arabian sea and Bay of Bengal. The region of minimum attenuation in pure particle-free sea water is found to be at 450 to 500 nm. It is shown that in the presence of suspended particles and chlorophyll, the window shifts to longer wavelength side. Some suggestions for future work in this area are also given in the concluding section.

  7. Probing Single- to Multi-Cell Level Charge Transport in Geobacter sulfurreducens DL-1

    DTIC Science & Technology

    2013-11-08

    nanoelectrodes in which an array of nanoholes (200 400 nm2) precludes or single window (6 10 mm2) allows for direct microbe/electrode contacts (Supplementary...previous measurement with S. oneidensis MR-1 cells, which gave almost identical current output between window and nanohole electrodes30. At longer times, it...is interesting to note that the nanohole electrode was also able to yield a current, albeit at a much smaller magnitude, which could be attributed to

  8. Profiling of steroid metabolites after transdermal and oral administration of testosterone by ultra-high pressure liquid chromatography coupled to quadrupole time-of-flight mass spectrometry.

    PubMed

    Badoud, F; Boccard, J; Schweizer, C; Pralong, F; Saugy, M; Baume, N

    2013-11-01

    The screening of testosterone (T) misuse for doping control is based on the urinary steroid profile, including T, its precursors and metabolites. Modifications of individual levels and ratio between those metabolites are indicators of T misuse. In the context of screening analysis, the most discriminant criterion known to date is based on the T glucuronide (TG) to epitestosterone glucuronide (EG) ratio (TG/EG). Following the World Anti-Doping Agency (WADA) recommendations, there is suspicion of T misuse when the ratio reaches 4 or beyond. While this marker remains very sensitive and specific, it suffers from large inter-individual variability, with important influence of enzyme polymorphisms. Moreover, use of low dose or topical administration forms makes the screening of endogenous steroids difficult while the detection window no longer suits the doping habit. As reference limits are estimated on the basis of population studies, which encompass inter-individual and inter-ethnic variability, new strategies including individual threshold monitoring and alternative biomarkers were proposed to detect T misuse. The purpose of this study was to evaluate the potential of ultra-high pressure liquid chromatography (UHPLC) coupled with a new generation high resolution quadrupole time-of-flight mass spectrometer (QTOF-MS) to investigate the steroid metabolism after transdermal and oral T administration. An approach was developed to quantify 12 targeted urinary steroids as direct glucuro- and sulfo-conjugated metabolites, allowing the conservation of the phase II metabolism information, reflecting genetic and environmental influences. The UHPLC-QTOF-MS(E) platform was applied to clinical study samples from 19 healthy male volunteers, having different genotypes for the UGT2B17 enzyme responsible for the glucuroconjugation of T. Based on reference population ranges, none of the traditional markers of T misuse could detect doping after topical administration of T, while the detection window was short after oral TU ingestion. The detection ability of the 12 targeted steroids was thus evaluated by using individual thresholds following both transdermal and oral administration. Other relevant biomarkers and minor metabolites were studied for complementary information to the steroid profile, including sulfoconjugated analytes and hydroxy forms of glucuroconjugated metabolites. While sulfoconjugated steroids may provide helpful screening information for individuals with homozygotous UGT2B17 deletion, hydroxy-glucuroconjugated analytes could enhance the detection window of oral T undecanoate (TU) doping. Copyright © 2013 Elsevier Ltd. All rights reserved.

  9. America's Stonehenge, (A.S.), Its "Window into the Past," Jung's "Reincarnations," and Problems Like "A Wonderful Mind" Are Associated With Time-recurret Natural Phenomena Monitored By Native Americans Impacting Religous Zealotry.

    NASA Astrophysics Data System (ADS)

    Alexander, Kimbereley E.; McLeod, Roger D.

    2002-04-01

    Phenomena detected at A.S. in North Salem, N.H. are associated with: positive ionic charges, inclement weather, periodicities that are daily, weekly, earth-moon related, but not with the full moon, seasonal annual and longer cyclicities, exceedingly faint lotus-blossom-blue light "tubes" traveling along electromagnetic field (EMF) lines, incorrect beliefs about reincarnation, and a multitude of aspects of schizophrenia as popularized in the movie "A Wonderful Mind". EgyptAir Flight 990, 10/99, documented approximately 90 seconds of the copilot's repeated phrase "I rely on God." Spiritual Gnostic, Cathar-Amerindian mistaken "reincarnations" and other esoteric mystical visions and unions, teenagers or other psychologically bizarre behaviors and all of the above are related to detectable or documented time variations of the EMF; Amerindians say schizoid behavior, supernatural beings, or advanced ideas are "Manitou" aspects of the Great Spirit, our EMF!

  10. Object permanence in young infants: further evidence.

    PubMed

    Baillargeon, R; DeVos, J

    1991-12-01

    Recent evidence suggests that 4.5- and even 3.5-month-old infants realize that objects continue to exist when hidden. The goal of the present experiments was to obtain converging evidence of object permanence in young infants. Experiments were conducted using paradigms previously used to demonstrate object permanence in 5.5-month-old infants and 6.5-month-old infants. In one experiment, 3.5-month-old infants watched a short or a tall carrot slide along a track. The track's center was hidden by a screen with a large window in its upper half. The short carrot was shorter than the window's lower edge and so did not appear in the window when passing behind the screen; the tall carrot was taller than the window's lower edge and hence should have appeared in the window but did not. The infants looked reliably longer at the tall than at the short carrot event, suggesting that they (a) represented the existence, height, and trajectory of each carrot behind the screen and (b) expected the tall carrot to appear in the screen window and were surprised that it did not. Control trials supported this interpretation. In another experiment, 4.0-month-old infants saw a toy car roll along a track that was partly hidden by a screen. A large toy mouse was placed behind the screen, either on top or in back of the track. The female infants looked reliably longer when the mouse stood on top as opposed to in back of the track, suggesting that they (a) represented the existence and trajectory of the car behind the screen, (b) represented the existence and location of the mouse behind the screen, and (c) were surprised to see the car reappear from behind the screen when the mouse stood in its path. A second experiment supported this interpretation. The results of these experiments provide further evidence that infants aged 3.5 months and older are able to represent and to reason about hidden objects.

  11. Subsurface event detection and classification using Wireless Signal Networks.

    PubMed

    Yoon, Suk-Un; Ghazanfari, Ehsan; Cheng, Liang; Pamukcu, Sibel; Suleiman, Muhannad T

    2012-11-05

    Subsurface environment sensing and monitoring applications such as detection of water intrusion or a landslide, which could significantly change the physical properties of the host soil, can be accomplished using a novel concept, Wireless Signal Networks (WSiNs). The wireless signal networks take advantage of the variations of radio signal strength on the distributed underground sensor nodes of WSiNs to monitor and characterize the sensed area. To characterize subsurface environments for event detection and classification, this paper provides a detailed list and experimental data of soil properties on how radio propagation is affected by soil properties in subsurface communication environments. Experiments demonstrated that calibrated wireless signal strength variations can be used as indicators to sense changes in the subsurface environment. The concept of WSiNs for the subsurface event detection is evaluated with applications such as detection of water intrusion, relative density change, and relative motion using actual underground sensor nodes. To classify geo-events using the measured signal strength as a main indicator of geo-events, we propose a window-based minimum distance classifier based on Bayesian decision theory. The window-based classifier for wireless signal networks has two steps: event detection and event classification. With the event detection, the window-based classifier classifies geo-events on the event occurring regions that are called a classification window. The proposed window-based classification method is evaluated with a water leakage experiment in which the data has been measured in laboratory experiments. In these experiments, the proposed detection and classification method based on wireless signal network can detect and classify subsurface events.

  12. Subsurface Event Detection and Classification Using Wireless Signal Networks

    PubMed Central

    Yoon, Suk-Un; Ghazanfari, Ehsan; Cheng, Liang; Pamukcu, Sibel; Suleiman, Muhannad T.

    2012-01-01

    Subsurface environment sensing and monitoring applications such as detection of water intrusion or a landslide, which could significantly change the physical properties of the host soil, can be accomplished using a novel concept, Wireless Signal Networks (WSiNs). The wireless signal networks take advantage of the variations of radio signal strength on the distributed underground sensor nodes of WSiNs to monitor and characterize the sensed area. To characterize subsurface environments for event detection and classification, this paper provides a detailed list and experimental data of soil properties on how radio propagation is affected by soil properties in subsurface communication environments. Experiments demonstrated that calibrated wireless signal strength variations can be used as indicators to sense changes in the subsurface environment. The concept of WSiNs for the subsurface event detection is evaluated with applications such as detection of water intrusion, relative density change, and relative motion using actual underground sensor nodes. To classify geo-events using the measured signal strength as a main indicator of geo-events, we propose a window-based minimum distance classifier based on Bayesian decision theory. The window-based classifier for wireless signal networks has two steps: event detection and event classification. With the event detection, the window-based classifier classifies geo-events on the event occurring regions that are called a classification window. The proposed window-based classification method is evaluated with a water leakage experiment in which the data has been measured in laboratory experiments. In these experiments, the proposed detection and classification method based on wireless signal network can detect and classify subsurface events. PMID:23202191

  13. Signal detection on spontaneous reports of adverse events following immunisation: a comparison of the performance of a disproportionality-based algorithm and a time-to-onset-based algorithm

    PubMed Central

    van Holle, Lionel; Bauchau, Vincent

    2014-01-01

    Purpose Disproportionality methods measure how unexpected the observed number of adverse events is. Time-to-onset (TTO) methods measure how unexpected the TTO distribution of a vaccine-event pair is compared with what is expected from other vaccines and events. Our purpose is to compare the performance associated with each method. Methods For the disproportionality algorithms, we defined 336 combinations of stratification factors (sex, age, region and year) and threshold values of the multi-item gamma Poisson shrinker (MGPS). For the TTO algorithms, we defined 18 combinations of significance level and time windows. We used spontaneous reports of adverse events recorded for eight vaccines. The vaccine product labels were used as proxies for true safety signals. Algorithms were ranked according to their positive predictive value (PPV) for each vaccine separately; amedian rank was attributed to each algorithm across vaccines. Results The algorithm with the highest median rank was based on TTO with a significance level of 0.01 and a time window of 60 days after immunisation. It had an overall PPV 2.5 times higher than for the highest-ranked MGPS algorithm, 16th rank overall, which was fully stratified and had a threshold value of 0.8. A TTO algorithm with roughly the same sensitivity as the highest-ranked MGPS had better specificity but longer time-to-detection. Conclusions Within the scope of this study, the majority of the TTO algorithms presented a higher PPV than for any MGPS algorithm. Considering the complementarity of TTO and disproportionality methods, a signal detection strategy combining them merits further investigation. PMID:24038719

  14. Resource sharing on CSMA/CD networks in the presence of noise. M.S. Thesis

    NASA Technical Reports Server (NTRS)

    Dinschel, Duane Edward

    1987-01-01

    Resource sharing on carrier sense multiple access with collision detection (CSMA/CD) networks can be accomplished by using window-control algorithms for bus contention. The window-control algorithms are designed to grant permission to transmit to the station with the minimum contention parameter. Proper operation of the window-control algorithm requires that all stations sense the same state of the newtork in each contention slot. Noise causes the state of the network to appear as a collision. False collisions can cause the window-control algorithm to terminate without isolating any stations. A two-phase window-control protocol and approximate recurrence equation with noise as a parameter to improve the performance of the window-control algorithms in the presence of noise are developed. The results are compared through simulation, with the approximate recurrence equation yielding the best overall performance. Noise is even a bigger problem when it is not detected by all stations. In such cases it is possible for the window boundaries of the contending stations to become out of phase. Consequently, it is possible to isolate a station other than the one with the minimum contention parameter. To guarantee proper isolation of the minimum, a broadcast phase must be added after the termination of the algorithm. The protocol required to correct the window-control algorithm when noise is not detected by all stations is discussed.

  15. Coincidence detection in the medial superior olive: mechanistic implications of an analysis of input spiking patterns

    PubMed Central

    Franken, Tom P.; Bremen, Peter; Joris, Philip X.

    2014-01-01

    Coincidence detection by binaural neurons in the medial superior olive underlies sensitivity to interaural time difference (ITD) and interaural correlation (ρ). It is unclear whether this process is akin to a counting of individual coinciding spikes, or rather to a correlation of membrane potential waveforms resulting from converging inputs from each side. We analyzed spike trains of axons of the cat trapezoid body (TB) and auditory nerve (AN) in a binaural coincidence scheme. ITD was studied by delaying “ipsi-” vs. “contralateral” inputs; ρ was studied by using responses to different noises. We varied the number of inputs; the monaural and binaural threshold and the coincidence window duration. We examined physiological plausibility of output “spike trains” by comparing their rate and tuning to ITD and ρ to those of binaural cells. We found that multiple inputs are required to obtain a plausible output spike rate. In contrast to previous suggestions, monaural threshold almost invariably needed to exceed binaural threshold. Elevation of the binaural threshold to values larger than 2 spikes caused a drastic decrease in rate for a short coincidence window. Longer coincidence windows allowed a lower number of inputs and higher binaural thresholds, but decreased the depth of modulation. Compared to AN fibers, TB fibers allowed higher output spike rates for a low number of inputs, but also generated more monaural coincidences. We conclude that, within the parameter space explored, the temporal patterns of monaural fibers require convergence of multiple inputs to achieve physiological binaural spike rates; that monaural coincidences have to be suppressed relative to binaural ones; and that the neuron has to be sensitive to single binaural coincidences of spikes, for a number of excitatory inputs per side of 10 or less. These findings suggest that the fundamental operation in the mammalian binaural circuit is coincidence counting of single binaural input spikes. PMID:24822037

  16. Initial Steps Toward Next-Generation, Waveform-Based, Three-Dimensional Models and Metrics to Improve Nuclear Explosion Monitoring in the Middle East

    DTIC Science & Technology

    2008-09-30

    propagation effects by splitting apart the longer period surface waves from the shorter period, depth-sensitive Pnl waves. Problematic, or high-error... Pnl waves. Problematic, or high-error, stations and paths were further analyzed to identify systematic errors with unknown sensor responses and...frequency Pnl components and slower, longer period surface waves. All cut windows are fit simultaneously, allowing equal weighting of phases that may be

  17. Multi-window detection for P-wave in electrocardiograms based on bilateral accumulative area.

    PubMed

    Chen, Riqing; Huang, Yingsong; Wu, Jian

    2016-11-01

    P-wave detection is one of the most challenging aspects in electrocardiograms (ECGs) due to its low amplitude, low frequency, and variable waveforms. This work introduces a novel multi-window detection method for P-wave delineation based on the bilateral accumulative area. The bilateral accumulative area is calculated by summing the areas covered by the P-wave curve with left and right sliding windows. The onset and offset of a positive P-wave correspond to the local maxima of the area detector. The position drift and difference in area variation of local extreme points with different windows are used to systematically combine multi-window and 12-lead synchronous detection methods, which are used to screen the optimization boundary points from all extreme points of different window widths and adaptively match the P-wave location. The proposed method was validated with ECG signals from various databases, including the Standard CSE Database, T-Wave Alternans Challenge Database, PTB Diagnostic ECG Database, and the St. Petersburg Institute of Cardiological Technics 12-Lead Arrhythmia Database. The average sensitivity Se was 99.44% with a positive predictivity P+ of 99.37% for P-wave detection. Standard deviations of 3.7 and 4.3ms were achieved for the onset and offset of P-waves, respectively, which is in agreement with the accepted tolerances required by the CSE committee. Compared with well-known delineation methods, this method can achieve high sensitivity and positive predictability using a simple calculation process. The experiment results suggest that the bilateral accumulative area could be an effective detection tool for ECG signal analysis. Copyright © 2016 Elsevier Ltd. All rights reserved.

  18. Low-complexity image processing for real-time detection of neonatal clonic seizures.

    PubMed

    Ntonfo, Guy Mathurin Kouamou; Ferrari, Gianluigi; Raheli, Riccardo; Pisani, Francesco

    2012-05-01

    In this paper, we consider a novel low-complexity real-time image-processing-based approach to the detection of neonatal clonic seizures. Our approach is based on the extraction, from a video of a newborn, of an average luminance signal representative of the body movements. Since clonic seizures are characterized by periodic movements of parts of the body (e.g., the limbs), by evaluating the periodicity of the extracted average luminance signal it is possible to detect the presence of a clonic seizure. The periodicity is investigated, through a hybrid autocorrelation-Yin estimation technique, on a per-window basis, where a time window is defined as a sequence of consecutive video frames. While processing is first carried out on a single window basis, we extend our approach to interlaced windows. The performance of the proposed detection algorithm is investigated, in terms of sensitivity and specificity, through receiver operating characteristic curves, considering video recordings of newborns affected by neonatal seizures.

  19. The effect of length and starting year on trend analyses of temperatures in Spanish mainland (1951-2010). Seasonal analyses: Spring (III)

    NASA Astrophysics Data System (ADS)

    Salinas Solé, Celia; Peña Angulo, Dhais; Gonzalez Hidalgo, Jose Carlos; Brunetti, Michele

    2017-04-01

    In this poster we applied the moving window approach (see Poster I of this collection) to analyze trends of spring and its corresponding months (March, April, May) temperature mean values of maximum (Tmax) and minimum (Tmin) in Spanish mainland to detect the effects of length period and starting year. Monthly series belong to Monthly Temperature dataset of Spanish mainland (MOTEDAS). Database contains in its grid format of 5236 pixels of monthly series (10x10 km). The threshold used in spatial analyses considers 20% of land under significant trend (p<0.05). The most striking results are as follow: • Seasonal Tmax shows that global trend was positive and significant until the mid 80's with higher values than 75% from between 1954-2010 to 1979-2010, being reduced after to the north region. So, from 1985-2010 no significant trend have been detected. Monthly analyses show differences. March trend is not significant (<20% of area) since 1974-2010, while significant trend in April and May varies between 1961-2010/1979-2010 and 1965-2010/1980-2010 respectively, clearly located in northern midland and Mediterranean coastland. • Spring Tmin trend analyses is significantly (>20%) during all temporal windows, notwithstanding NW do not show global significant trend, and in the most recent temporal windows only affect significantly SE. Monthly analyses also differ. Not significant trend is detected in March from 1979-2010, and from 1985-2010 in May, being April the month in any temporal windows with more than 20% of land affected by significant trend. • Spatial differences are detected between windows (South-North in March, East-West in April-May. We can conclude Tmax trend varies accordingly temporal windows dramatically in spring and no significance has been detected in the recent decades. Northern areas and Mediterranean coastland seems to be the most affected. Monthy Tmax trend spatial analyses confirm the heterogeneity of diurnal temperatures; different spatial gradients in windows have been detected between months. Seasonal Tmin show a more global temporal pattern. Spatial gradients of significance between months have been detected, in some sense contraries to the observed in Tmax.

  20. [Prediction of round window visibility in cochlear implantation with temporal bone high resolution computed tomography].

    PubMed

    Sun, S P; Lu, W; Lei, Y B; Men, X M; Zuo, B; Ding, S G

    2017-08-07

    Objective: To discuss the prediction of round window(RW) visibility in cochlear implantation(CI) with temporal bone high resolution computed tomography(HRCT). Methods: From January 2013 to January 2017, 130 cases underwent both HRCT and CI in our hospital were analyzed. The distance from facial nerve to posterior canal wall(FWD), the angle between facial nerve and inner margin of round window(FRA), and the angle between facial nerve and tympanic anulus to inner margin of round window(FRAA) were detected at the level of round window on axial temporal bone HRCT. A line parallel to the posterior wall of ear canal was drawn from the anterior wall of facial nerve at the level of round window on axial temporal bone HRCT and its relationship with round window was detected (facial-round window line, FRL): type0-posterior to the round window, type1-between the round window, type2-anterior to the round window. Their(FWD, FRA, FRAA, FRL) relationships with intra-operative round window visibility were analyzed by SPSS 17.0 software. Results: FWD( F =18.76, P =0.00), FRA( F =34.57, P =0.00), FRAA ( F =14.24, P =0.00) could affect the intra-operative RW visibility significantly. RW could be exposed completely during CI when preoperative HRCT showing type0 FRL. RW might be partly exposed and not exposed when preoperative HRCT showing type1 and type2 FRL respectively. Conclusion: FWD, FRA, FRAA and FRL of temporal bone HRCT can predict intra-operative round window visibility effectively in CI surgery.

  1. Driving under the influence of cocaine: Quantitative determination of basic drugs in oral fluid obtained during roadside controls and a controlled study with cocaine users.

    PubMed

    Di Fazio, Vincent; Wille, Sarah M R; Toennes, Stefan W; van Wel, Janelle H P; Ramaekers, Johannes G; Samyn, Nele

    2018-03-10

    Using the Belgian Drugs and Driving procedure, 36% of the cocaine-positive oral fluid (OF) screening results were not confirmed in plasma. This study investigates the impact of the choice of screening devices and confirmation matrix on the detection of cocaine use. An ultra-performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS) method quantifying cocaine, benzoylecgonine (BZE), and other basic drugs in OF was developed and validated. This method monitored OF samples obtained either from a roadside (n = 12) or a double-blind controlled study with cocaine users (n = 10) who were given either a capsule containing 300 mg of cocaine-HCl or a placebo. The OF data were compared to plasma concentrations to obtain concentration-time profiles. In addition, the sensitivity and accuracy of the Drugwipe5S® was assessed. A significant difference between the OF volume collected at baseline/placebo (median 0.93 mL [range 0.43-1.92 mL]) or after cocaine-HCL intake (0.79 mL [0.30-1.21 mL]) was observed. The median OF/Plasma at the 3 collection time points were 10.7, 13.8, 6.7 for cocaine and 0.8, 1.7, 0.8 for BZE, respectively. The Drugwipe5S® detected cocaine use until at least 4 hours after intake. When applying the Belgian legal confirmation decision limit of 10 ng/mL in OF, an accuracy of 75%-98% was observed, depending on the study setting. Cocaine concentrations in OF were much higher and were detected longer as compared to plasma, when applying the same decision limit. From a toxicological viewpoint, the longer detection window with the higher sensitivity of Cocaine and BZE is beneficial to detect drivers in the crash/fatigue phase. Copyright © 2018 John Wiley & Sons, Ltd.

  2. Characterizing the nature of subpulse drifting in pulsars

    NASA Astrophysics Data System (ADS)

    Basu, Rahul; Mitra, Dipanjan

    2018-04-01

    We report a detailed study of subpulse drifting in four long-period pulsars. These pulsars were observed in the Meterwavelength Single-pulse Polarimetric Emission Survey and the presence of phase-modulated subpulse drifting was reported in each case. We carried out longer duration and more sensitive observations lasting 7000-12 000 periods in the frequency range 306-339 MHz. The drifting features were characterized in great detail, including the phase variations across the pulse window. For two pulsars, J0820-1350 and J1720-2933, the phases changed steadily across the pulse window. The pulsar J1034-3224 has five components. The leading component was very weak and was barely detectable in our single-pulse observations. The four trailing components showed subpulse drifting. The phase variations changed in alternate components with a reversal in the sign of the gradient. This phenomenon is known as bi-drifting. The pulsar J1555-3134 showed two distinct peak frequencies of comparable strengths in the fluctuation spectrum. The two peaks did not appear to be harmonically related and were most likely a result of different physical processes. Additionally, the long observations enabled us to explore the temporal variations of the drifting features. The subpulse drifting was largely constant with time but small fluctuations around a mean value were seen.

  3. Utility of adaptive control processing for the interpretation of digital mammograms.

    PubMed

    Jinnouchi, Mikako; Yabuuchi, Hidetake; Kubo, Makoto; Tokunaga, Eriko; Yamamoto, Hidetaka; Honda, Hiroshi

    2016-11-01

    Background Adaptive control processing for mammography (ACM) is a novel program that automatically sets up appropriate image-processing parameters for individual mammograms (MMGs) by analyzing the focal and whole breast histogram. Purpose To investigate whether ACM improves the image contrast of digital MMGs and whether it improves radiologists' diagnostic performance in reading of MMGs. Material and Methods One hundred normal cases for image quality assessment and another 100 cases (50 normal and 50 cancers) for observer performance assessment were enrolled. All mammograms were examined with and without ACM. Five radiologists assessed the intra- and extra-mammary contrast of 100 normal MMGs, and the mean scores of the intra- and extra-mammary contrast were compared between MMGs with and without ACM in both the dense and non-dense group. They classified 100 MMGs into BI-RADS categories 1-5, and were asked to rate the images on a scale of 0 to 100 for the likelihood of the presence of category 3-5 lesions in each breast. Detectability of breast cancer, reading time, and frequency of window adjustment were compared between MMGs with and without ACM. Results ACM improved the intra-mammary contrast in both the dense and non-dense group but degraded extra-mammary contrast in the dense group. There was no significant difference in detectability of breast cancer between MMGs with and without ACM. Frequency of window adjustment without ACM was significantly higher than that with ACM. Reading time without ACM was significantly longer than that with ACM. Conclusion ACM improves the image contrast of MMGs and shortens reading time.

  4. Expanded interleaved solid-state memory for a wide bandwidth transient waveform recorder

    NASA Technical Reports Server (NTRS)

    Thomas, R. M., Jr.

    1980-01-01

    An interleaved, solid state expanded memory for a 100 MHz bandwidth waveform recorder is described. The memory development resulted in a significant increase in the storage capacity of a commercially available recorder. The motivation for the memory expansion of the waveform recorder, which is used to support in-flight measurement of the electromagnetic characteristics of lightning discharges, was the need for a significantly longer data window than that provided by the commercially available unit. The expanded recorder provides a data window that is 128 times longer than the commercial unit, while maintaining the same time resolution, by increasing the storage capacity from 1024 to 131 072 data samples. The expanded unit operates at sample periods as small as 10 ns. Sampling once every 10 ns, the commercial unit records for about 10 microseconds before the memory is filled, whereas, the expanded unit records for about 1300 microseconds. A photo of the expanded waveform recorder is shown.

  5. Novel windowing technique realized in FPGA for radar system

    NASA Astrophysics Data System (ADS)

    Escamilla-Hernandez, E.; Kravchenko, V. F.; Ponomaryov, V. I.; Ikuo, Arai

    2006-02-01

    To improve the weak target detection ability in radar applications a pulse compression is usually used that in the case linear FM modulation can improve the SNR. One drawback in here is that it can add the range side-lobes in reflectivity measurements. Using weighting window processing in time domain it is possible to decrease significantly the side-lobe level (SLL) and resolve small or low power targets those are masked by powerful ones. There are usually used classical windows such as Hamming, Hanning, etc. in window processing. Additionally to classical ones in this paper we also use a novel class of windows based on atomic functions (AF) theory. For comparison of simulation and experimental results we applied the standard parameters, such as coefficient of amplification, maximum level of side-lobe, width of main lobe, etc. To implement the compression-windowing model on hardware level it has been employed FPGA. This work aims at demonstrating a reasonably flexible implementation of FM-linear signal, pulse compression and windowing employing FPGA's. Classical and novel AF window technique has been investigated to reduce the SLL taking into account the noise influence and increasing the detection ability of the small or weak targets in the imaging radar. Paper presents the experimental hardware results of windowing in pulse compression radar resolving several targets for rectangular, Hamming, Kaiser-Bessel, (see manuscript for formula) functions windows. The windows created by use the atomic functions offer sufficiently better decreasing of the SLL in case of noise presence and when we move away of the main lobe in comparison with classical windows.

  6. Dependence of Surface Contrast on Emission Angle in Cassini ISS 938-nm Images of Titan

    NASA Technical Reports Server (NTRS)

    Fussner, S.; McEwen, A.; Perry, J.; Turtle, E.; Dawson, D.; Porco, C.; West, R.

    2005-01-01

    Titan, the largest of Saturn s moons, is one of the most difficult solid surfaces in the Solar System to study. It is shrouded in a thick atmosphere with fine haze particles extending up to 500 km. [1] The atmosphere itself is rich in methane, which allows clear viewing of the surface only through narrow "windows" in the methane spectrum. Even in these methane windows, the haze absorbs and scatters light, blurring surface features and reducing the contrast of images. The haze optical depth is high at visible wavelengths, and decreases at longer (infrared) wavelengths. [2

  7. The Effect of reduced transmittance window tinting on drivers' ability to detect targets in their rear-view mirrors : final report.

    DOT National Transportation Integrated Search

    1996-01-01

    This study addressed the degree to which motor vehicle window tint films impede drivers' ability to detect targets in their vehicle's rear-view mirrors. Twenty-four subjects participated. Each sat in the driver's seat of one of four experimental vehi...

  8. Adaptive early detection ML/PDA estimator for LO targets with EO sensors

    NASA Astrophysics Data System (ADS)

    Chummun, Muhammad R.; Kirubarajan, Thiagalingam; Bar-Shalom, Yaakov

    2000-07-01

    The batch Maximum Likelihood Estimator, combined with Probabilistic Data (ML-PDA), has been shown to be effective in acquiring low observable (LO) - low SNR - non-maneuvering targets in the presence of heavy clutter. The use of signal strength or amplitude information (AI) in the ML-PDA estimator with AI in a sliding-window fashion, to detect high- speed targets in heavy clutter using electro-optical (EO) sensors. The initial time and the length of the sliding-window are adjusted adaptively according to the information content of the received measurements. A track validation scheme via hypothesis testing is developed to confirm the estimated track, that is, the presence of a target, in each window. The sliding-window ML-PDA approach, together with track validation, enables early detection by rejecting noninformative scans, target reacquisition in case of temporary target disappearance and the handling of targets with speeds evolving over time. The proposed algorithm is shown to detect the target, which is hidden in as many as 600 false alarms per scan, 10 frames earlier than the Multiple Hypothesis Tracking (MHT) algorithm.

  9. Analysis of oil-pipeline distribution of multiple products subject to delivery time-windows

    NASA Astrophysics Data System (ADS)

    Jittamai, Phongchai

    This dissertation defines the operational problems of, and develops solution methodologies for, a distribution of multiple products into oil pipeline subject to delivery time-windows constraints. A multiple-product oil pipeline is a pipeline system composing of pipes, pumps, valves and storage facilities used to transport different types of liquids. Typically, products delivered by pipelines are petroleum of different grades moving either from production facilities to refineries or from refineries to distributors. Time-windows, which are generally used in logistics and scheduling areas, are incorporated in this study. The distribution of multiple products into oil pipeline subject to delivery time-windows is modeled as multicommodity network flow structure and mathematically formulated. The main focus of this dissertation is the investigation of operating issues and problem complexity of single-source pipeline problems and also providing solution methodology to compute input schedule that yields minimum total time violation from due delivery time-windows. The problem is proved to be NP-complete. The heuristic approach, a reversed-flow algorithm, is developed based on pipeline flow reversibility to compute input schedule for the pipeline problem. This algorithm is implemented in no longer than O(T·E) time. This dissertation also extends the study to examine some operating attributes and problem complexity of multiple-source pipelines. The multiple-source pipeline problem is also NP-complete. A heuristic algorithm modified from the one used in single-source pipeline problems is introduced. This algorithm can also be implemented in no longer than O(T·E) time. Computational results are presented for both methodologies on randomly generated problem sets. The computational experience indicates that reversed-flow algorithms provide good solutions in comparison with the optimal solutions. Only 25% of the problems tested were more than 30% greater than optimal values and approximately 40% of the tested problems were solved optimally by the algorithms.

  10. Letter-sound processing deficits in children with developmental dyslexia: An ERP study.

    PubMed

    Moll, Kristina; Hasko, Sandra; Groth, Katharina; Bartling, Jürgen; Schulte-Körne, Gerd

    2016-04-01

    The time course during letter-sound processing was investigated in children with developmental dyslexia (DD) and typically developing (TD) children using electroencephalography. Thirty-eight children with DD and 25 TD children participated in a visual-auditory oddball paradigm. Event-related potentials (ERPs) elicited by standard and deviant stimuli in an early (100-190 ms) and late (560-750 ms) time window were analysed. In the early time window, ERPs elicited by the deviant stimulus were delayed and less left lateralized over fronto-temporal electrodes for children with DD compared to TD children. In the late time window, children with DD showed higher amplitudes extending more over right frontal electrodes. Longer latencies in the early time window and stronger right hemispheric activation in the late time window were associated with slower reading and naming speed. Additionally, stronger right hemispheric activation in the late time window correlated with poorer phonological awareness skills. Deficits in early stages of letter-sound processing influence later more explicit cognitive processes during letter-sound processing. Identifying the neurophysiological correlates of letter-sound processing and their relation to reading related skills provides insight into the degree of automaticity during letter-sound processing beyond behavioural measures of letter-sound-knowledge. Copyright © 2016 International Federation of Clinical Neurophysiology. Published by Elsevier Ireland Ltd. All rights reserved.

  11. Fast Human Detection for Intelligent Monitoring Using Surveillance Visible Sensors

    PubMed Central

    Ko, Byoung Chul; Jeong, Mira; Nam, JaeYeal

    2014-01-01

    Human detection using visible surveillance sensors is an important and challenging work for intruder detection and safety management. The biggest barrier of real-time human detection is the computational time required for dense image scaling and scanning windows extracted from an entire image. This paper proposes fast human detection by selecting optimal levels of image scale using each level's adaptive region-of-interest (ROI). To estimate the image-scaling level, we generate a Hough windows map (HWM) and select a few optimal image scales based on the strength of the HWM and the divide-and-conquer algorithm. Furthermore, adaptive ROIs are arranged per image scale to provide a different search area. We employ a cascade random forests classifier to separate candidate windows into human and nonhuman classes. The proposed algorithm has been successfully applied to real-world surveillance video sequences, and its detection accuracy and computational speed show a better performance than those of other related methods. PMID:25393782

  12. A metabolic profile for ‘Honeycrisp’ apple soggy breakdown, a chilling induced physiological disorder

    USDA-ARS?s Scientific Manuscript database

    ‘Honeycrisp’ is an economically important apple cultivar increasing rapidly in planted acreage in many apple growing regions. Long-term cold storage can enhance value by enabling a longer window of availability, but the cultivar is highly susceptible to chilling induced disorders. Soggy breakdown ...

  13. In situ studies of microbial inactivation during high pressure processing

    NASA Astrophysics Data System (ADS)

    Maldonado, Jose Antonio; Schaffner, Donald W.; Cuitiño, Alberto M.; Karwe, Mukund V.

    2016-01-01

    High pressure processing (HPP) has been shown to reduce microbial concentration in foods. The mechanisms of microbial inactivation by HPP have been associated with damage to cell membranes. The real-time response of bacteria to HPP was measured to elucidate the mechanisms of inactivation, which can aid in designing more effective processes. Different pressure cycling conditions were used to expose Enterobacter aerogenes cells to HPP. Propidium iodide (PI) was used as a probe, which fluoresces after penetrating cells with damaged membranes and binding with nucleic acids. A HPP vessel with sapphire windows was used for measuring fluorescence in situ. Membrane damage was detected during pressurization and hold time, but not during depressurization. The drop in fluorescence was larger than expected after pressure cycles at higher pressure and longer times. This indicated possible reversible disassociation of ribosomes resulting in additional binding of PI to exposed RNA under pressure and its release after depressurization.

  14. A New TCP Congestion Control Supporting RTT-Fairness

    NASA Astrophysics Data System (ADS)

    Ogura, Kazumine; Nemoto, Yohei; Su, Zhou; Katto, Jiro

    This paper focuses on RTT-fairness of multiple TCP flows over the Internet, and proposes a new TCP congestion control named “HRF (Hybrid RTT-Fair)-TCP”. Today, it is a serious problem that the flows having smaller RTT utilize more bandwidth than others when multiple flows having different RTT values compete in the same network. This means that a user with longer RTT may not be able to obtain sufficient bandwidth by the current methods. This RTT fairness issue has been discussed in many TCP papers. An example is CR (Constant Rate) algorithm, which achieves RTT-fairness by multiplying the square of RTT value in its window increment phase against TCP-Reno. However, the method halves its windows size same as TCP-Reno when a packet loss is detected. This makes worse its efficiency in certain network cases. On the other hand, recent proposed TCP versions essentially require throughput efficiency and TCP-friendliness with TCP-Reno. Therefore, we try to keep these advantages in our TCP design in addition to RTT-fairness. In this paper, we make intuitive analytical models in which we separate resource utilization processes into two cases: utilization of bottleneck link capacity and that of buffer space at the bottleneck link router. These models take into account three characteristic algorithms (Reno, Constant Rate, Constant Increase) in window increment phase where a sender receives an acknowledgement successfully. Their validity is proved by both simulations and implementations. From these analyses, we propose HRF-TCP which switches two modes according to observed RTT values and achieves RTT fairness. Experiments are carried out to validate the proposed method. Finally, HRF-TCP outperforms conventional methods in RTT-fairness, efficiency and friendliness with TCP-Reno.

  15. Constraints on melt content of off-axis magma lenses at the East Pacific Rise from analysis of 3-D seismic amplitude variation with angle of incidence

    NASA Astrophysics Data System (ADS)

    Aghaei, Omid; Nedimović, Mladen R.; Marjanović, Milena; Carbotte, Suzanne M.; Pablo Canales, J.; Carton, Hélène; Nikić, Nikola

    2017-06-01

    We use 3-D multichannel seismic data to form partial angle P wave stacks and apply amplitude variation with angle (AVA) crossplotting to assess melt content and melt distribution within two large midcrustal off-axis magma lenses (OAMLs) found along the East Pacific Rise from 9°37.5'N to 9°57'N. The signal envelope of the partial angle stacks suggests that both OAMLs are partially molten with higher average melt content and more uniform melt distribution in the southern OAML than in the northern OAML. For AVA crossplotting, the OAMLs are subdivided into seven 1 km2 analysis windows. The AVA crossplotting results indicate that the OAMLs contain a smaller amount of melt than the axial magma lens (AML). For both OAMLs, a higher melt fraction is detected within analysis windows located close to the ridge axis than within the most distant windows. The highest average melt concentration is interpreted for the central sections of the OAMLs. The overall low OAML melt content could be indicative of melt lost due to recent off-axis eruptions, drainage to the AML, or limited mantle melt supply. Based on the results of this and earlier bathymetric, morphological, geochemical, and geophysical investigations, we propose that the melt-poor OAML state is largely the result of limited melt supply from the underlying mantle source reservoir with smaller contribution attributed to melt leakage to the AML. We hypothesize that the investigated OAMLs have a longer period of melt replenishment, lower eruption recurrence rates, and lower eruption volumes than the AML, though some could be single intrusion events.

  16. Novel, near-infrared spectroscopic, label-free, techniques to assess bone abnormalities such as Paget's disease, osteoporosis and bone fractures

    NASA Astrophysics Data System (ADS)

    Sordillo, Diana C.; Sordillo, Laura A.; Shi, Lingyan; Budansky, Yury; Sordillo, Peter P.; Alfano, Robert R.

    2015-02-01

    Near- infrared (NIR) light with wavelengths from 650 nm to 950 nm (known as the first NIR window) has conventionally been used as a non-invasive technique that can reach deeper penetration depths through media than light at shorter wavelengths. Recently, several novel, NIR, label-free, techniques have been developed to assess Paget's disease of bone, osteoporosis and bone microfractures. We designed a Bone Optical Analyzer (BOA) which utilizes the first window to measure changes of Hb and HbO2. Paget's disease is marked by an increase in vascularization in bones, and this device can enable easy diagnosis and more frequent monitoring of the patient's condition, without exposing him to a high cumulative dose of radiation. We have also used inverse imaging algorithms to reconstruct 2D and 3D maps of the bone's structure. This device could be used to assess diseases such as osteoporosis. Using 800 nm femtosecond excitation with two-photon (2P) microscopy, we acquired 2PM images of the periosteum and spatial frequency spectra (based on emission of collagen) from the periosteal regions. This technique can provide information on the structure of the periosteum and can detect abnormalities which may be an indication of disease. Most recently, we showed that longer NIR wavelengths in the second and third NIR windows (1100 nm-1350 nm, 1600 nm-1870 nm), could be used to image bone microfractures. Use of NIR light could allow for repeated studies in patients with diseases such as Paget's and osteoporosis quickly and non-invasively, and could impact the current management for these diseases.

  17. UV exposure in cars.

    PubMed

    Moehrle, Matthias; Soballa, Martin; Korn, Manfred

    2003-08-01

    There is increasing knowledge about the hazards of solar and ultraviolet (UV) radiation to humans. Although people spend a significant time in cars, data on UV exposure during traveling are lacking. The aim of this study was to obtain basic information on personal UV exposure in cars. UV transmission of car glass samples, windscreen, side and back windows and sunroof, was determined. UV exposure of passengers was evaluated in seven German middle-class cars, fitted with three different types of car windows. UV doses were measured with open or closed windows/sunroof of Mercedes-Benz E 220 T, E 320, and S 500, and in an open convertible car (Mercedes-Benz CLK). Bacillus subtilis spore film dosimeters (Viospor) were attached to the front, vertex, cheeks, upper arms, forearms and thighs of 'adult' and 'child' dummies. UV wavelengths longer than >335 nm were transmitted through car windows, and UV irradiation >380 nm was transmitted through compound glass windscreens. There was some variation in the spectral transmission of side windows according to the type of glass. On the arms, UV exposure was 3-4% of ambient radiation when the car windows were shut, and 25-31% of ambient radiation when the windows were open. In the open convertible car, the relative personal doses reached 62% of ambient radiation. The car glass types examined offer substantial protection against short-wave UV radiation. Professional drivers should keep car windows closed on sunny days to reduce occupational UV exposure. In individuals with polymorphic light eruption, produced by long-wave UVA, additional protection by plastic films, clothes or sunscreens appears necessary.

  18. SWCD: a sliding window and self-regulated learning-based background updating method for change detection in videos

    NASA Astrophysics Data System (ADS)

    Işık, Şahin; Özkan, Kemal; Günal, Serkan; Gerek, Ömer Nezih

    2018-03-01

    Change detection with background subtraction process remains to be an unresolved issue and attracts research interest due to challenges encountered on static and dynamic scenes. The key challenge is about how to update dynamically changing backgrounds from frames with an adaptive and self-regulated feedback mechanism. In order to achieve this, we present an effective change detection algorithm for pixelwise changes. A sliding window approach combined with dynamic control of update parameters is introduced for updating background frames, which we called sliding window-based change detection. Comprehensive experiments on related test videos show that the integrated algorithm yields good objective and subjective performance by overcoming illumination variations, camera jitters, and intermittent object motions. It is argued that the obtained method makes a fair alternative in most types of foreground extraction scenarios; unlike case-specific methods, which normally fail for their nonconsidered scenarios.

  19. Shot boundary detection and label propagation for spatio-temporal video segmentation

    NASA Astrophysics Data System (ADS)

    Piramanayagam, Sankaranaryanan; Saber, Eli; Cahill, Nathan D.; Messinger, David

    2015-02-01

    This paper proposes a two stage algorithm for streaming video segmentation. In the first stage, shot boundaries are detected within a window of frames by comparing dissimilarity between 2-D segmentations of each frame. In the second stage, the 2-D segments are propagated across the window of frames in both spatial and temporal direction. The window is moved across the video to find all shot transitions and obtain spatio-temporal segments simultaneously. As opposed to techniques that operate on entire video, the proposed approach consumes significantly less memory and enables segmentation of lengthy videos. We tested our segmentation based shot detection method on the TRECVID 2007 video dataset and compared it with block-based technique. Cut detection results on the TRECVID 2007 dataset indicate that our algorithm has comparable results to the best of the block-based methods. The streaming video segmentation routine also achieves promising results on a challenging video segmentation benchmark database.

  20. The value of "liver windows" settings in the detection of small renal cell carcinomas on unenhanced computed tomography.

    PubMed

    Sahi, Kamal; Jackson, Stuart; Wiebe, Edward; Armstrong, Gavin; Winters, Sean; Moore, Ronald; Low, Gavin

    2014-02-01

    To assess if "liver window" settings improve the conspicuity of small renal cell carcinomas (RCC). Patients were analysed from our institution's pathology-confirmed RCC database that included the following: (1) stage T1a RCCs, (2) an unenhanced computed tomography (CT) abdomen performed ≤ 6 months before histologic diagnosis, and (3) age ≥ 17 years. Patients with multiple tumours, prior nephrectomy, von Hippel-Lindau disease, and polycystic kidney disease were excluded. The unenhanced CT was analysed, and the tumour locations were confirmed by using corresponding contrast-enhanced CT or magnetic resonance imaging studies. Representative single-slice axial, coronal, and sagittal unenhanced CT images were acquired in "soft tissue windows" (width, 400 Hounsfield unit (HU); level, 40 HU) and liver windows (width, 150 HU; level, 88 HU). In addition, single-slice axial, coronal, and sagittal unenhanced CT images of nontumourous renal tissue (obtained from the same cases) were acquired in soft tissue windows and liver windows. These data sets were randomized, unpaired, and were presented independently to 3 blinded radiologists for analysis. The presence or absence of suspicious findings for tumour was scored on a 5-point confidence scale. Eighty-three of 415 patients met the study criteria. Receiver operating characteristics (ROC) analysis, t test analysis, and kappa analysis were used. ROC analysis showed statistically superior diagnostic performance for liver windows compared with soft tissue windows (area under the curve of 0.923 vs 0.879; P = .0002). Kappa statistics showed "good" vs "moderate" agreement between readers for liver windows compared with soft tissue windows. Use of liver windows settings improves the detection of small RCCs on the unenhanced CT. Copyright © 2014 Canadian Association of Radiologists. Published by Elsevier Inc. All rights reserved.

  1. Prediction of CpG-island function: CpG clustering vs. sliding-window methods

    PubMed Central

    2010-01-01

    Background Unmethylated stretches of CpG dinucleotides (CpG islands) are an outstanding property of mammal genomes. Conventionally, these regions are detected by sliding window approaches using %G + C, CpG observed/expected ratio and length thresholds as main parameters. Recently, clustering methods directly detect clusters of CpG dinucleotides as a statistical property of the genome sequence. Results We compare sliding-window to clustering (i.e. CpGcluster) predictions by applying new ways to detect putative functionality of CpG islands. Analyzing the co-localization with several genomic regions as a function of window size vs. statistical significance (p-value), CpGcluster shows a higher overlap with promoter regions and highly conserved elements, at the same time showing less overlap with Alu retrotransposons. The major difference in the prediction was found for short islands (CpG islets), often exclusively predicted by CpGcluster. Many of these islets seem to be functional, as they are unmethylated, highly conserved and/or located within the promoter region. Finally, we show that window-based islands can spuriously overlap several, differentially regulated promoters as well as different methylation domains, which might indicate a wrong merge of several CpG islands into a single, very long island. The shorter CpGcluster islands seem to be much more specific when concerning the overlap with alternative transcription start sites or the detection of homogenous methylation domains. Conclusions The main difference between sliding-window approaches and clustering methods is the length of the predicted islands. Short islands, often differentially methylated, are almost exclusively predicted by CpGcluster. This suggests that CpGcluster may be the algorithm of choice to explore the function of these short, but putatively functional CpG islands. PMID:20500903

  2. Detection with Enhanced Energy Windowing Phase I Report

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bass, David A.; Enders, Alexander L.

    2016-12-01

    This document reviews the progress of Phase I of the Detection with Enhanced Energy Windowing (DEEW) project. The DEEW project is the implementation of software incorporating an algorithm which reviews data generated by radiation portal monitors and utilizes advanced and novel techniques for detecting radiological and fissile material while not alarming on Naturally Occurring Radioactive Material. Independent testing indicated that the Enhanced Energy Windowing algorithm showed promise at reducing the probability of alarm in the stream of commerce compared to existing algorithms and other developmental algorithms, while still maintaining adequate sensitivity to threats. This document contains a brief description ofmore » the project, instructions for setting up and running the applications, and guidance to help make reviewing the output files and source code easier.« less

  3. Concorde noise-induced building vibrations John F. Kennedy International Airport

    NASA Technical Reports Server (NTRS)

    Mayes, W. H.; Deloach, R.; Stephens, D. G.; Cawthorn, J. M.; Holmes, H. K.; Lewis, R. B.; Holliday, B. G.; Ward, D. W.

    1978-01-01

    The outdoor and indoor noise levels resulting from aircraft flyovers and certain nonaircraft events were recorded at six home sites along with the associated vibration levels in the walls, windows, and floors of these test homes. Limited subjective tests conducted to examine the human detection and annoyance thresholds for building vibration and rattle caused by aircraft noise showed that both vibration and rattle were detected subjectively in several houses for some operations of both the Concorde and subsonic aircraft. Preliminary results indicate that the relationship between window vibration and aircraft noise is: (1) linear, with vibration levels being accurately predicted from OASPL levels measured near the window; (2) consistent from flyover to flyover for a given aircraft type under approach conditions; (3) no different for Concorde than for other conventional jet transports (in the case of window vibrations induced under approach power conditions); and (4) relatively high levels of window vibration measured during Concorde operations are due more to higher OASPL levels than to unique Concorde source characteristics.

  4. The effect of natural ventilation strategy on indoor air quality in schools.

    PubMed

    Stabile, Luca; Dell'Isola, Marco; Russi, Aldo; Massimo, Angelamaria; Buonanno, Giorgio

    2017-10-01

    In order to reduce children's exposure to pollutants in classrooms a proper ventilation strategy need to be adopted. Such strategy is even more important in naturally ventilated schools where the air exchange rate is only based on the manual airing of classrooms. The present work aimed to evaluate the effect of the manual airing strategy on indoor air quality in Italian classrooms. For this aim, schools located in the Central Italy were investigated. Indoor air quality was studied in terms of CO 2 , particle number and PM concentrations and compared to corresponding outdoor levels. In particular two experimental analyses were performed: i) a comparison between heating and non heating season in different schools; ii) an evaluation of the effect of scheduled airing periods on the dilution of indoor-generated pollutants and the penetration of outdoor-generated ones. In particular, different airing procedures, i.e. different window opening periods (5 to 20min per hour) were imposed and controlled through contacts installed on classroom windows and doors. Results revealed that the airing strategy differently affect the several pollutants detected in indoors depending on their size, origin and dynamics. Longer airing periods may result in reduced indoor CO 2 concentrations and, similarly, other gaseous indoor-generated pollutants. Simultaneously, higher ultrafine particle (and other vehicular-related pollutants) levels in indoors were measured due to infiltration from outdoors. Finally, a negligible effect of the manual airing on PM levels in classroom was detected. Therefore, a simultaneous reduction in concentration levels for all the pollutant metrics in classrooms cannot be obtained just relying upon air permeability of the building envelope and manual airing of the classrooms. Copyright © 2017 Elsevier B.V. All rights reserved.

  5. Novel hermetic packaging methods for MOEMS

    NASA Astrophysics Data System (ADS)

    Stark, David

    2003-01-01

    Hermetic packaging of micro-optoelectromechanical systems (MOEMS) is an immature technology, lacking industry-consensus methods and standards. Off-the-shelf, catalog window assemblies are not yet available. Window assemblies are in general custom designed and manufactured for each new product, resulting in longer than acceptable cycle times, high procurement costs and questionable reliability. There are currently two dominant window-manufacturing methods wherein a metal frame is attached to glass, as well as a third, less-used method. The first method creates a glass-to-metal seal by heating the glass above its Tg to fuse it to the frame. The second method involves first metallizing the glass where it is to be attached to the frame, and then soldering the glass to the frame. The third method employs solder-glass to bond the glass to the frame. A novel alternative with superior features compared to the three previously described window-manufacturing methods is proposed. The new approach lends itself to a plurality of glass-to-metal attachment techniques. Benefits include lower temperature processing than two of the current methods and potentially more cost-effective manufacturing than all three of today"s attachment methods.

  6. Equilibrator: Modeling Chemical Equilibria with Excel

    ERIC Educational Resources Information Center

    Vander Griend, Douglas A.

    2011-01-01

    Equilibrator is a Microsoft Excel program for learning about chemical equilibria through modeling, similar in function to EQS4WIN, which is no longer supported and does not work well with newer Windows operating systems. Similar to EQS4WIN, Equilibrator allows the user to define a system with temperature, initial moles, and then either total…

  7. A Frequency-Domain Implementation of a Sliding-Window Traffic Sign Detector for Large Scale Panoramic Datasets

    NASA Astrophysics Data System (ADS)

    Creusen, I. M.; Hazelhoff, L.; De With, P. H. N.

    2013-10-01

    In large-scale automatic traffic sign surveying systems, the primary computational effort is concentrated at the traffic sign detection stage. This paper focuses on reducing the computational load of particularly the sliding window object detection algorithm which is employed for traffic sign detection. Sliding-window object detectors often use a linear SVM to classify the features in a window. In this case, the classification can be seen as a convolution of the feature maps with the SVM kernel. It is well known that convolution can be efficiently implemented in the frequency domain, for kernels larger than a certain size. We show that by careful reordering of sliding-window operations, most of the frequency-domain transformations can be eliminated, leading to a substantial increase in efficiency. Additionally, we suggest to use the overlap-add method to keep the memory use within reasonable bounds. This allows us to keep all the transformed kernels in memory, thereby eliminating even more domain transformations, and allows all scales in a multiscale pyramid to be processed using the same set of transformed kernels. For a typical sliding-window implementation, we have found that the detector execution performance improves with a factor of 5.3. As a bonus, many of the detector improvements from literature, e.g. chi-squared kernel approximations, sub-class splitting algorithms etc., can be more easily applied at a lower performance penalty because of an improved scalability.

  8. Sliding window prior data assisted compressed sensing for MRI tracking of lung tumors.

    PubMed

    Yip, Eugene; Yun, Jihyun; Wachowicz, Keith; Gabos, Zsolt; Rathee, Satyapal; Fallone, B G

    2017-01-01

    Hybrid magnetic resonance imaging and radiation therapy devices are capable of imaging in real-time to track intrafractional lung tumor motion during radiotherapy. Highly accelerated magnetic resonance (MR) imaging methods can potentially reduce system delay time and/or improves imaging spatial resolution, and provide flexibility in imaging parameters. Prior Data Assisted Compressed Sensing (PDACS) has previously been proposed as an acceleration method that combines the advantages of 2D compressed sensing and the KEYHOLE view-sharing technique. However, as PDACS relies on prior data acquired at the beginning of a dynamic imaging sequence, decline in image quality occurs for longer duration scans due to drifts in MR signal. Novel sliding window-based techniques for refreshing prior data are proposed as a solution to this problem. MR acceleration is performed by retrospective removal of data from the fully sampled sets. Six patients with lung tumors are scanned with a clinical 3 T MRI using a balanced steady-state free precession (bSSFP) sequence for 3 min at approximately 4 frames per second, for a total of 650 dynamics. A series of distinct pseudo-random patterns of partial k-space acquisition is generated such that, when combined with other dynamics within a sliding window of 100 dynamics, covers the entire k-space. The prior data in the sliding window are continuously refreshed to reduce the impact of MR signal drifts. We intended to demonstrate two different ways to utilize the sliding window data: a simple averaging method and a navigator-based method. These two sliding window methods are quantitatively compared against the original PDACS method using three metrics: artifact power, centroid displacement error, and Dice's coefficient. The study is repeated with pseudo 0.5 T images by adding complex, normally distributed noise with a standard deviation that reduces image SNR, relative to original 3 T images, by a factor of 6. Without sliding window implemented, PDACS-reconstructed dynamic datasets showed progressive increases in image artifact power as the 3 min scan progresses. With sliding windows implemented, this increase in artifact power is eliminated. Near the end of a 3 min scan at 3 T SNR and 5× acceleration, implementation of an averaging (navigator) sliding window method improves our metrics by the following ways: artifact power decreases from 0.065 without sliding window to 0.030 (0.031), centroid error decreases from 2.64 to 1.41 mm (1.28 mm), and Dice coefficient agreement increases from 0.860 to 0.912 (0.915). At pseudo 0.5 T SNR, the improvements in metrics are as follows: artifact power decreases from 0.110 without sliding window to 0.0897 (0.0985), centroid error decreases from 2.92 mm to 1.36 mm (1.32 mm), and Dice coefficient agreements increases from 0.851 to 0.894 (0.896). In this work we demonstrated the negative impact of slow changes in MR signal for longer duration PDACS dynamic scans, namely increases in image artifact power and reductions of tumor tracking accuracy. We have also demonstrated sliding window implementations (i.e., refreshing of prior data) of PDACS are effective solutions to this problem at both 3 T and simulated 0.5 T bSSFP images. © 2016 American Association of Physicists in Medicine.

  9. The design and hardware implementation of a low-power real-time seizure detection algorithm

    NASA Astrophysics Data System (ADS)

    Raghunathan, Shriram; Gupta, Sumeet K.; Ward, Matthew P.; Worth, Robert M.; Roy, Kaushik; Irazoqui, Pedro P.

    2009-10-01

    Epilepsy affects more than 1% of the world's population. Responsive neurostimulation is emerging as an alternative therapy for the 30% of the epileptic patient population that does not benefit from pharmacological treatment. Efficient seizure detection algorithms will enable closed-loop epilepsy prostheses by stimulating the epileptogenic focus within an early onset window. Critically, this is expected to reduce neuronal desensitization over time and lead to longer-term device efficacy. This work presents a novel event-based seizure detection algorithm along with a low-power digital circuit implementation. Hippocampal depth-electrode recordings from six kainate-treated rats are used to validate the algorithm and hardware performance in this preliminary study. The design process illustrates crucial trade-offs in translating mathematical models into hardware implementations and validates statistical optimizations made with empirical data analyses on results obtained using a real-time functioning hardware prototype. Using quantitatively predicted thresholds from the depth-electrode recordings, the auto-updating algorithm performs with an average sensitivity and selectivity of 95.3 ± 0.02% and 88.9 ± 0.01% (mean ± SEα = 0.05), respectively, on untrained data with a detection delay of 8.5 s [5.97, 11.04] from electrographic onset. The hardware implementation is shown feasible using CMOS circuits consuming under 350 nW of power from a 250 mV supply voltage from simulations on the MIT 180 nm SOI process.

  10. Salient object detection method based on multiple semantic features

    NASA Astrophysics Data System (ADS)

    Wang, Chunyang; Yu, Chunyan; Song, Meiping; Wang, Yulei

    2018-04-01

    The existing salient object detection model can only detect the approximate location of salient object, or highlight the background, to resolve the above problem, a salient object detection method was proposed based on image semantic features. First of all, three novel salient features were presented in this paper, including object edge density feature (EF), object semantic feature based on the convex hull (CF) and object lightness contrast feature (LF). Secondly, the multiple salient features were trained with random detection windows. Thirdly, Naive Bayesian model was used for combine these features for salient detection. The results on public datasets showed that our method performed well, the location of salient object can be fixed and the salient object can be accurately detected and marked by the specific window.

  11. Fault detection using a two-model test for changes in the parameters of an autoregressive time series

    NASA Technical Reports Server (NTRS)

    Scholtz, P.; Smyth, P.

    1992-01-01

    This article describes an investigation of a statistical hypothesis testing method for detecting changes in the characteristics of an observed time series. The work is motivated by the need for practical automated methods for on-line monitoring of Deep Space Network (DSN) equipment to detect failures and changes in behavior. In particular, on-line monitoring of the motor current in a DSN 34-m beam waveguide (BWG) antenna is used as an example. The algorithm is based on a measure of the information theoretic distance between two autoregressive models: one estimated with data from a dynamic reference window and one estimated with data from a sliding reference window. The Hinkley cumulative sum stopping rule is utilized to detect a change in the mean of this distance measure, corresponding to the detection of a change in the underlying process. The basic theory behind this two-model test is presented, and the problem of practical implementation is addressed, examining windowing methods, model estimation, and detection parameter assignment. Results from the five fault-transition simulations are presented to show the possible limitations of the detection method, and suggestions for future implementation are given.

  12. Delayed treatment with ADAMTS13 ameliorates cerebral ischemic injury without hemorrhagic complication.

    PubMed

    Nakano, Takafumi; Irie, Keiichi; Hayakawa, Kazuhide; Sano, Kazunori; Nakamura, Yoshihiko; Tanaka, Masayoshi; Yamashita, Yuta; Satho, Tomomitsu; Fujioka, Masayuki; Muroi, Carl; Matsuo, Koichi; Ishikura, Hiroyasu; Futagami, Kojiro; Mishima, Kenichi

    2015-10-22

    Tissue plasminogen activator (tPA) is the only approved therapy for acute ischemic stroke. However, delayed tPA treatment increases the risk of cerebral hemorrhage and can result in exacerbation of nerve injury. ADAMTS13, a von Willebrand factor (VWF) cleaving protease, has a protective effect against ischemic brain injury and may reduce bleeding risk by cleaving VWF. We examined whether ADAMTS13 has a longer therapeutic time window in ischemic stroke than tPA in mice subjected to middle cerebral artery occlusion (MCAO). ADAMTS13 (0.1mg/kg) or tPA (10mg/kg) was administered i.v., immediately after reperfusion of after 2-h or 4-h MCAO for comparison of the therapeutic time windows in ischemic stroke. Infarct volume, hemorrhagic volume, plasma high-mobility group box1 (HMGB1) levels and cerebral blood flow were measured 24h after MCAO. Both ADAMTS13 and tPA improved the infarct volume without hemorrhagic complications in 2-h MCAO mice. On the other hand, ADAMTS13 reduced the infarct volume and plasma HMGB1 levels, and improved cerebral blood flow without hemorrhagic complications in 4-h MCAO mice, but tPA was not effective and these animals showed massive intracerebral hemorrhage. These results indicated that ADAMTS13 has a longer therapeutic time window in ischemic stroke than tPA, and ADAMTS13 may be useful as a new therapeutic agent for ischemic stroke. Copyright © 2015 Elsevier B.V. All rights reserved.

  13. Thin-window high-efficiency position sensitive proportional counter for the vacuum flat crystal spectrometers on the Lawrence Livermore National Laboratory electron beam ion trap (abstract)

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Brown, G. V.; Beiersdorfer, P.; Goddard, R.

    2001-01-01

    We have mounted 1 {mu}m thick aluminized polyimide windows onto the position sensitive proportional counters employed by the wide-band flat crystal spectrometers at the Lawrence Livermore National Laboratory electron beam ion trap experiment. The aluminized polyimide, supported by thin wires across the short axis of the window, is used to isolate the detection chamber of the proportional counters, which operate at a pressure of 760 Torr, from the vacuum chamber of the spectrometer. The windows are modified versions of those developed for the proportional counters which were used during ground calibration of the Chandra X-ray Observatory. The transmission properties ofmore » these windows are, therefore, well known. The increased transmission efficiency of the polyimide windows relative to the 4 {mu}m thick polypropylene window material previously employed by our proportional counters has extended the useful range of the spectrometer from roughly 20 to 30 Aa at energies below the carbon edge, as well as increasing detection efficiency at wavelengths beyond the carbon edge. Using an octadecyl hydrogen maleate crystal with 2d=63.5Aa, we demonstrate the increased wavelength coverage by measuring the resonance, intercombination, and forbidden lines in helium-like NVII in two different density regimes. The thin polyimide windows have also increased the efficiency of the spectrometers entire wavelength range. To demonstrate the increased efficiency we compare the FeXVII spectrum in the 15--17 Aa band measured with the 1 {mu}m aluminized polyimide windows to the 4 {mu}m aluminized polypropylene windows. The comparison shows an average increase in efficiency of {approx}40%. The polyimide windows have a significantly lower leak rate than the polypropylene windows making it possible to achieve approximately an order of magnitude lower pressure in the spectrometer vacuum chamber which reduces the gas load on the trap region.« less

  14. Detection of anabolic and androgenic steroids and/or their esters in horse hair using ultra-high performance liquid chromatography-high resolution mass spectrometry.

    PubMed

    Kwok, Karen Y; Choi, Timmy L S; Kwok, Wai Him; Wong, Jenny K Y; Wan, Terence S M

    2017-04-14

    Anabolic and androgenic steroids (AASs) are a class of prohibited substances banned in horseracing at all times. The common approach for controlling the misuse of AASs in equine sports is by detecting the presence of AASs and/or their metabolites in urine and blood samples using gas chromatography-mass spectrometry (GC-MS) and liquid chromatography-mass spectrometry (LC-MS). This approach, however, often falls short as the duration of effect for many AASs are longer than their detection time in both urine and blood. As a result, there is a high risk that such AASs could escape detection in their official race-day samples although they may have been used during the long period of training. Hair analysis, on the other hand, can afford significantly longer detection windows. In addition, the identification of synthetic ester derivatives of AASs in hair, particularly for the endogenous ones, can provide unequivocal proof of their exogenous origin. This paper describes the development of a sensitive method (at sub to low parts-per-billion or ppb levels) for detecting 48 AASs and/or their esters in horse hair using ultra-high performance liquid chromatography-high resolution mass spectrometry (UHPLC-HRMS). Decontaminated horse hair was pulverised and subjected to in-situ liquid-liquid extraction in a mixture of hexane - ethyl acetate (7:3, v/v) and phosphate buffer (0.1M, pH 9.5), followed by additional clean-up using mixed-mode solid-phase extraction. The final extract was analysed using UHPLC-HRMS in the positive electrospray ionisation (ESI) mode with both full scan and parallel reaction monitoring (PRM). This method was validated for qualitative identification purposes. Validation data, including method specificity, method sensitivity, extraction recovery, method precision and matrix effect are presented. Method applicability was demonstrated by the successful detection and confirmation of testosterone propionate in a referee hair sample. To our knowledge, this was the first report of a comprehensive screening method for detecting as many as 48 AASs and/or their esters in horse hair. Moreover, retrospective analysis of non-targeted AASs and/or their esters was made feasible by re-examining the full scan UHPLC-HRMS data acquired. Copyright © 2017 Elsevier B.V. All rights reserved.

  15. OPTMAIN- A FORTRAN CODE FOR THE CALCULATION OF PROBE VOLUME GEOMETRY CHANGES IN A LASER ANEMOMETRY SYSTEM CAUSED BY WINDOW REFRACTION

    NASA Technical Reports Server (NTRS)

    Owen, A. K.

    1994-01-01

    The laser anemometer has provided the fluid dynamicist with a powerful tool for nonintrusively measuring fluid velocities. One of the more common types of laser anemometers, the laser fringe anemometer, divides a single laser beam into two parallel beams and then focuses them on a point in space called the "probe volume" (PV) where the fluid velocity is measured. Many applications using this method for measuring fluid velocities require the observation of fluids through a window. The passage of the laser beams through materials having different indices of refraction has the following effects: 1) the position of the probe volume will change; 2) the beams will uncross, i.e., no longer lie in the same plane at the probe volume location; and 3) for nonflat plate windows, the crossing angle of the two beams will change. OPTMAIN uses a ray tracing technique, which is not restricted to special cases, to study the changes in probe volume geometry and position due to refraction effects caused by both flat and general smooth windows. Input parameters are the indices of refraction on both sides of the window and of the window itself, the window shape, the assumed position of the probe volume and the actual position of the focusing lens relative to the window, the orientation of the plane which contains the laser beams, the beam crossing angle, and the laser beam wavelength. OPTMAIN is written in FORTRAN 77 for interactive execution. It has been implemented on a DEC VAX 11/780 under VMS 5.0 with a virtual memory requirement of 50K. OPTMAIN was developed in 1987.

  16. Fully automatic time-window selection using machine learning for global adjoint tomography

    NASA Astrophysics Data System (ADS)

    Chen, Y.; Hill, J.; Lei, W.; Lefebvre, M. P.; Bozdag, E.; Komatitsch, D.; Tromp, J.

    2017-12-01

    Selecting time windows from seismograms such that the synthetic measurements (from simulations) and measured observations are sufficiently close is indispensable in a global adjoint tomography framework. The increasing amount of seismic data collected everyday around the world demands "intelligent" algorithms for seismic window selection. While the traditional FLEXWIN algorithm can be "automatic" to some extent, it still requires both human input and human knowledge or experience, and thus is not deemed to be fully automatic. The goal of intelligent window selection is to automatically select windows based on a learnt engine that is built upon a huge number of existing windows generated through the adjoint tomography project. We have formulated the automatic window selection problem as a classification problem. All possible misfit calculation windows are classified as either usable or unusable. Given a large number of windows with a known selection mode (select or not select), we train a neural network to predict the selection mode of an arbitrary input window. Currently, the five features we extract from the windows are its cross-correlation value, cross-correlation time lag, amplitude ratio between observed and synthetic data, window length, and minimum STA/LTA value. More features can be included in the future. We use these features to characterize each window for training a multilayer perceptron neural network (MPNN). Training the MPNN is equivalent to solve a non-linear optimization problem. We use backward propagation to derive the gradient of the loss function with respect to the weighting matrices and bias vectors and use the mini-batch stochastic gradient method to iteratively optimize the MPNN. Numerical tests show that with a careful selection of the training data and a sufficient amount of training data, we are able to train a robust neural network that is capable of detecting the waveforms in an arbitrary earthquake data with negligible detection error compared to existing selection methods (e.g. FLEXWIN). We will introduce in detail the mathematical formulation of the window-selection-oriented MPNN and show very encouraging results when applying the new algorithm to real earthquake data.

  17. Reconsidering Return-to-Play Times: A Broader Perspective on Concussion Recovery

    PubMed Central

    D’Lauro, Christopher; Johnson, Brian R.; McGinty, Gerald; Allred, C. Dain; Campbell, Darren E.; Jackson, Jonathan C.

    2018-01-01

    Background: Return-to-play protocols describe stepwise, graduated recoveries for safe return from concussion; however, studies that comprehensively track return-to-play time are expensive to administer and heavily sampled from elite male contact-sport athletes. Purpose: To retrospectively assess probable recovery time for collegiate patients to return to play after concussion, especially for understudied populations, such as women and nonelite athletes. Study Design: Cohort study; Level of evidence, 3. Methods: Medical staff at a military academy logged a total of 512 concussion medical records over 38 months. Of these, 414 records included complete return-to-play protocols with return-to-play time, sex, athletic status, cause, and other data. Results: Overall mean return to play was 29.4 days. Sex and athletic status both affected return-to-play time. Men showed significantly shorter return to play than women, taking 24.7 days (SEM, 1.5 days) versus 35.5 days (SEM, 2.7 days) (P < .001). Intercollegiate athletes also reported quicker return-to-play times than nonintercollegiate athletes: 25.4 days (SEM, 2.6 days) versus 34.7 days (SEM, 1.6 days) (P = .002). These variables did not significantly interact. Conclusion: Mean recovery time across all groups (29.4 days) showed considerably longer return to play than the most commonly cited concussion recovery time window (7-10 days) for collegiate athletes. Understudied groups, such as women and nonelite athletes, demonstrated notably longer recovery times. The diversity of this sample population was associated with longer return-to-play times; it is unclear how other population-specific factors may have contributed. These inclusive return-to-play windows may indicate longer recovery times outside the population of elite athletes. PMID:29568786

  18. Automated Critical Test Findings Identification and Online Notification System Using Artificial Intelligence in Imaging.

    PubMed

    Prevedello, Luciano M; Erdal, Barbaros S; Ryu, John L; Little, Kevin J; Demirer, Mutlu; Qian, Songyue; White, Richard D

    2017-12-01

    Purpose To evaluate the performance of an artificial intelligence (AI) tool using a deep learning algorithm for detecting hemorrhage, mass effect, or hydrocephalus (HMH) at non-contrast material-enhanced head computed tomographic (CT) examinations and to determine algorithm performance for detection of suspected acute infarct (SAI). Materials and Methods This HIPAA-compliant retrospective study was completed after institutional review board approval. A training and validation dataset of noncontrast-enhanced head CT examinations that comprised 100 examinations of HMH, 22 of SAI, and 124 of noncritical findings was obtained resulting in 2583 representative images. Examinations were processed by using a convolutional neural network (deep learning) using two different window and level configurations (brain window and stroke window). AI algorithm performance was tested on a separate dataset containing 50 examinations with HMH findings, 15 with SAI findings, and 35 with noncritical findings. Results Final algorithm performance for HMH showed 90% (45 of 50) sensitivity (95% confidence interval [CI]: 78%, 97%) and 85% (68 of 80) specificity (95% CI: 76%, 92%), with area under the receiver operating characteristic curve (AUC) of 0.91 with the brain window. For SAI, the best performance was achieved with the stroke window showing 62% (13 of 21) sensitivity (95% CI: 38%, 82%) and 96% (27 of 28) specificity (95% CI: 82%, 100%), with AUC of 0.81. Conclusion AI using deep learning demonstrates promise for detecting critical findings at noncontrast-enhanced head CT. A dedicated algorithm was required to detect SAI. Detection of SAI showed lower sensitivity in comparison to detection of HMH, but showed reasonable performance. Findings support further investigation of the algorithm in a controlled and prospective clinical setting to determine whether it can independently screen noncontrast-enhanced head CT examinations and notify the interpreting radiologist of critical findings. © RSNA, 2017 Online supplemental material is available for this article.

  19. The wide window of face detection.

    PubMed

    Hershler, Orit; Golan, Tal; Bentin, Shlomo; Hochstein, Shaul

    2010-08-20

    Faces are detected more rapidly than other objects in visual scenes and search arrays, but the cause for this face advantage has been contested. In the present study, we found that under conditions of spatial uncertainty, faces were easier to detect than control targets (dog faces, clocks and cars) even in the absence of surrounding stimuli, making an explanation based only on low-level differences unlikely. This advantage improved with eccentricity in the visual field, enabling face detection in wider visual windows, and pointing to selective sparing of face detection at greater eccentricities. This face advantage might be due to perceptual factors favoring face detection. In addition, the relative face advantage is greater under flanked than non-flanked conditions, suggesting an additional, possibly attention-related benefit enabling face detection in groups of distracters.

  20. Holographic particle detection

    NASA Technical Reports Server (NTRS)

    Bowen, Theodore

    1988-01-01

    The feasibility was studied of developing a novel particle track detector based on the detection of 1p-1s emission radiation from electron bubbles in liquid helium. The principles, design, construction, and initial testing of the detection system have been described in previous reports. The main obstacle encountered was the construction of the liquid-helium tight infrared windows. Despite numerous efforts in testing and redesigning the windows, the problem of window leakage at low temperature persisted. Due to limited time and resources, attention was switched to investigating the possibility of using room-temperature liquid as the detection medium. A possible mechanism was the detection of de-excitation radiation emitted from localized electrons in common liquids where electrons exhibit low mobilities, as suggested in the previous report. The purity of the liquid is critical in this method as the dissolved impurities (such as oxygen), even in trace amounts, will act as scavengers of electrons. Another mechanism is discussed whereby the formation of the superoxide ions by electron scavenging behavior of dissolved oxygen is exploited to detect the track of ionizing particles. An experiment to measure the ionization current produced in a liquid by a pulsed X-ray beam in order to study propertiies of the ions is also reported.

  1. Novel Hyperspectral Anomaly Detection Methods Based on Unsupervised Nearest Regularized Subspace

    NASA Astrophysics Data System (ADS)

    Hou, Z.; Chen, Y.; Tan, K.; Du, P.

    2018-04-01

    Anomaly detection has been of great interest in hyperspectral imagery analysis. Most conventional anomaly detectors merely take advantage of spectral and spatial information within neighboring pixels. In this paper, two methods of Unsupervised Nearest Regularized Subspace-based with Outlier Removal Anomaly Detector (UNRSORAD) and Local Summation UNRSORAD (LSUNRSORAD) are proposed, which are based on the concept that each pixel in background can be approximately represented by its spatial neighborhoods, while anomalies cannot. Using a dual window, an approximation of each testing pixel is a representation of surrounding data via a linear combination. The existence of outliers in the dual window will affect detection accuracy. Proposed detectors remove outlier pixels that are significantly different from majority of pixels. In order to make full use of various local spatial distributions information with the neighboring pixels of the pixels under test, we take the local summation dual-window sliding strategy. The residual image is constituted by subtracting the predicted background from the original hyperspectral imagery, and anomalies can be detected in the residual image. Experimental results show that the proposed methods have greatly improved the detection accuracy compared with other traditional detection method.

  2. Impact of windows and daylight exposure on overall health and sleep quality of office workers: a case-control pilot study.

    PubMed

    Boubekri, Mohamed; Cheung, Ivy N; Reid, Kathryn J; Wang, Chia-Hui; Zee, Phyllis C

    2014-06-15

    This research examined the impact of daylight exposure on the health of office workers from the perspective of subjective well-being and sleep quality as well as actigraphy measures of light exposure, activity, and sleep-wake patterns. Participants (N = 49) included 27 workers working in windowless environments and 22 comparable workers in workplaces with significantly more daylight. Windowless environment is defined as one without any windows or one where workstations were far away from windows and without any exposure to daylight. Well-being of the office workers was measured by Short Form-36 (SF-36), while sleep quality was measured by Pittsburgh Sleep Quality Index (PSQI). In addition, a subset of participants (N = 21; 10 workers in windowless environments and 11 workers in workplaces with windows) had actigraphy recordings to measure light exposure, activity, and sleep-wake patterns. Workers in windowless environments reported poorer scores than their counterparts on two SF-36 dimensions--role limitation due to physical problems and vitality--as well as poorer overall sleep quality from the global PSQI score and the sleep disturbances component of the PSQI. Compared to the group without windows, workers with windows at the workplace had more light exposure during the workweek, a trend toward more physical activity, and longer sleep duration as measured by actigraphy. We suggest that architectural design of office environments should place more emphasis on sufficient daylight exposure of the workers in order to promote office workers' health and well-being.

  3. 76 FR 19278 - Airworthiness Directives; The Boeing Company Model 747-100, 747-100B, 747-100B SUD, 747-200B, 747...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-04-07

    ... are proposing this AD to detect and correct cracking in the fail-safe interlayer of certain No. 2 and... to detect and correct cracking in the fail-safe interlayer of certain No. 2 and No. 3 glass windows... cracking in the fail-safe interlayer of certain No. 2 and No. 3 glass windows, which could result in loss...

  4. Methods and systems for detection of ice formation on surfaces

    NASA Technical Reports Server (NTRS)

    Alfano, Robert R. (Inventor); Wang, Wubao (Inventor); Sztul, Henry (Inventor); Budansky, Yury (Inventor)

    2007-01-01

    A system for detecting ice formation on metal, painted metal and other material surfaces can include a transparent window having an exterior surface upon which ice can form; a light source and optics configured and arranged to illuminate the exterior surface of the window from behind the exterior surface; and a detector and optics configured and arranged to receive light backscattered by the exterior surface and any ice disposed on the exterior surface and determine the thickness of the ice layer. For example, the system can be used with aircraft by placing one or more windows in the wings of the aircraft. The system is used for a novel optical method for real-time on-board detection and warning of ice formation on surfaces of airplanes, unmanned aerial vehicles (UAVs), and other vehicles and stationary structures to improve their safety and operation.

  5. M13 phage-functionalized single-walled carbon nanotubes as nanoprobes for second near-infrared window fluorescence imaging of targeted tumors.

    PubMed

    Yi, Hyunjung; Ghosh, Debadyuti; Ham, Moon-Ho; Qi, Jifa; Barone, Paul W; Strano, Michael S; Belcher, Angela M

    2012-03-14

    Second near-infrared (NIR) window light (950-1400 nm) is attractive for in vivo fluorescence imaging due to its deep penetration depth in tissues and low tissue autofluorescence. Here we show genetically engineered multifunctional M13 phage can assemble fluorescent single-walled carbon nanotubes (SWNTs) and ligands for targeted fluorescence imaging of tumors. M13-SWNT probe is detectable in deep tissues even at a low dosage of 2 μg/mL and up to 2.5 cm in tissue-like phantoms. Moreover, targeted probes show specific and up to 4-fold improved uptake in prostate specific membrane antigen positive prostate tumors compared to control nontargeted probes. This M13 phage-based second NIR window fluorescence imaging probe has great potential for specific detection and therapy monitoring of hard-to-detect areas. © 2012 American Chemical Society

  6. M13 phage-functionalized single-walled carbon nanotubes as nanoprobes for second near-infrared window fluorescence imaging of targeted tumors

    PubMed Central

    HAM, MOON-HO; QI, JIFA; BARONE, PAUL W.; STRANO, MICHAEL S.; BELCHER, ANGELA M.

    2014-01-01

    Second near-infrared (NIR) window light (950-1,400 nm) is attractive for in vivo fluorescence imaging due to its deep penetration depth in tissues and low tissue autofluorescence. Here we show genetically engineered multifunctional M13 phage can assemble fluorescent single-walled carbon nanotubes (SWNTs) and ligands for targeted fluorescence imaging of tumors. M13-SWNT probe is detectable in deep tissues even at a low dosage of 2 μg/mL and up to 2.5 cm in tissue-like phantoms. Moreover, targeted probes show specific and up to four-fold improved uptake in prostate specific membrane antigen positive prostate tumors compared to control non-targeted probes. This M13 phage-based second NIR window fluorescence imaging probe has great potential for specific detection and therapy monitoring of hard-to-detect areas. PMID:22268625

  7. SU-E-T-350: Verification of Gating Performance of a New Elekta Gating Solution: Response Kit and Catalyst System

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Xie, X; Cao, D; Housley, D

    2014-06-01

    Purpose: In this work, we have tested the performance of new respiratory gating solutions for Elekta linacs. These solutions include the Response gating and the C-RAD Catalyst surface mapping system.Verification measurements have been performed for a series of clinical cases. We also examined the beam on latency of the system and its impact on delivery efficiency. Methods: To verify the benefits of tighter gating windows, a Quasar Respiratory Motion Platform was used. Its vertical-motion plate acted as a respiration surrogate and was tracked by the Catalyst system to generate gating signals. A MatriXX ion-chamber array was mounted on its longitudinal-movingmore » platform. Clinical plans are delivered to a stationary and moving Matrix array at 100%, 50% and 30% gating windows and gamma scores were calculated comparing moving delivery results to the stationary result. It is important to note that as one moves to tighter gating windows, the delivery efficiency will be impacted by the linac's beam-on latency. Using a specialized software package, we generated beam-on signals of lengths of 1000ms, 600ms, 450ms, 400ms, 350ms and 300ms. As the gating windows get tighter, one can expect to reach a point where the dose rate will fall to nearly zero, indicating that the gating window is close to beam-on latency. A clinically useful gating window needs to be significantly longer than the latency for the linac. Results: As expected, the use of tighter gating windows improved delivery accuracy. However, a lower limit of the gating window, largely defined by linac beam-on latency, exists at around 300ms. Conclusion: The Response gating kit, combined with the C-RAD Catalyst, provides an effective solution for respiratorygated treatment delivery. Careful patient selection, gating window design, even visual/audio coaching may be necessary to ensure both delivery quality and efficiency. This research project is funded by Elekta.« less

  8. Indocyanine green fluorescence in second near-infrared (NIR-II) window

    PubMed Central

    Bhavane, Rohan; Ghaghada, Ketan B.; Vasudevan, Sanjeev A.; Kaay, Alexander; Annapragada, Ananth

    2017-01-01

    Indocyanine green (ICG), a FDA approved near infrared (NIR) fluorescent agent, is used in the clinic for a variety of applications including lymphangiography, intra-operative lymph node identification, tumor imaging, superficial vascular imaging, and marking ischemic tissues. These applications operate in the so-called “NIR-I” window (700–900 nm). Recently, imaging in the “NIR-II” window (1000–1700 nm) has attracted attention since, at longer wavelengths, photon absorption, and scattering effects by tissue components are reduced, making it possible to image deeper into the underlying tissue. Agents for NIR-II imaging are, however, still in pre-clinical development. In this study, we investigated ICG as a NIR-II dye. The absorbance and NIR-II fluorescence emission of ICG were measured in different media (PBS, plasma and ethanol) for a range of ICG concentrations. In vitro and in vivo testing were performed using a custom-built spectral NIR assembly to facilitate simultaneous imaging in NIR-I and NIR-II window. In vitro studies using ICG were performed using capillary tubes (as a simulation of blood vessels) embedded in Intralipid solution and tissue phantoms to evaluate depth of tissue penetration in NIR-I and NIR-II window. In vivo imaging using ICG was performed in nude mice to evaluate vascular visualization in the hind limb in the NIR-I and II windows. Contrast-to-noise ratios (CNR) were calculated for comparison of image quality in NIR-I and NIR-II window. ICG exhibited significant fluorescence emission in the NIR-II window and this emission (similar to the absorption profile) is substantially affected by the environment of the ICG molecules. In vivo imaging further confirmed the utility of ICG as a fluorescent dye in the NIR-II domain, with the CNR values being ~2 times those in the NIR-I window. The availability of an FDA approved imaging agent could accelerate the clinical translation of NIR-II imaging technology. PMID:29121078

  9. A Window into Longer Lasting Batteries

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    None

    2016-11-29

    There’s a new tool in the push to engineer rechargeable batteries that last longer and charge more quickly. An X-ray microscopy technique recently developed at Berkeley Lab has given scientists the ability to image nanoscale changes inside lithium-ion battery particles as they charge and discharge. The real-time images provide a new way to learn how batteries work, and how to improve them. The method was developed at Berkeley Lab’s Advanced Light Source, a DOE Office of Science User Facility, by a team of researchers from the Department of Energy’s SLAC National Accelerator Laboratory, Berkeley Lab, Stanford University, and other institutions.

  10. GPS or travel diary: Comparing spatial and temporal characteristics of visits to fast food restaurants and supermarkets

    PubMed Central

    Vernez Moudon, Anne; Hurvitz, Philip M.; Aggarwal, Anju; Drewnowski, Adam

    2017-01-01

    To assess differences between GPS and self-reported measures of location, we examined visits to fast food restaurants and supermarkets using a spatiotemporal framework. Data came from 446 participants who responded to a survey, filled out travel diaries of places visited, and wore a GPS receiver for seven consecutive days. Provided by Public Health Seattle King County, addresses from food permit data were matched to King County tax assessor parcels in a GIS. A three-step process was used to verify travel-diary reported visits using GPS records: (1) GPS records were temporally matched if their timestamps were within the time window created by the arrival and departure times reported in the travel diary; (2) the temporally matched GPS records were then spatially matched if they were located in a food establishment parcel of the same type reported in the diary; (3) the travel diary visit was then GPS-sensed if the name of food establishment in the parcel matched the one reported in the travel diary. To account for errors in reporting arrival and departure times, GPS records were temporally matched to three time windows: the exact time, +/- 10 minutes, and +/- 30 minutes. One third of the participants reported 273 visits to fast food restaurants; 88% reported 1,102 visits to supermarkets. Of these, 77.3 percent of the fast food and 78.6 percent supermarket visits were GPS-sensed using the +/-10-minute time window. At this time window, the mean travel-diary reported fast food visit duration was 14.5 minutes (SD 20.2), 1.7 minutes longer than the GPS-sensed visit. For supermarkets, the reported visit duration was 23.7 minutes (SD 18.9), 3.4 minutes longer than the GPS-sensed visit. Travel diaries provide reasonably accurate information on the locations and brand names of fast food restaurants and supermarkets participants report visiting. PMID:28388619

  11. GPS or travel diary: Comparing spatial and temporal characteristics of visits to fast food restaurants and supermarkets.

    PubMed

    Scully, Jason Y; Vernez Moudon, Anne; Hurvitz, Philip M; Aggarwal, Anju; Drewnowski, Adam

    2017-01-01

    To assess differences between GPS and self-reported measures of location, we examined visits to fast food restaurants and supermarkets using a spatiotemporal framework. Data came from 446 participants who responded to a survey, filled out travel diaries of places visited, and wore a GPS receiver for seven consecutive days. Provided by Public Health Seattle King County, addresses from food permit data were matched to King County tax assessor parcels in a GIS. A three-step process was used to verify travel-diary reported visits using GPS records: (1) GPS records were temporally matched if their timestamps were within the time window created by the arrival and departure times reported in the travel diary; (2) the temporally matched GPS records were then spatially matched if they were located in a food establishment parcel of the same type reported in the diary; (3) the travel diary visit was then GPS-sensed if the name of food establishment in the parcel matched the one reported in the travel diary. To account for errors in reporting arrival and departure times, GPS records were temporally matched to three time windows: the exact time, +/- 10 minutes, and +/- 30 minutes. One third of the participants reported 273 visits to fast food restaurants; 88% reported 1,102 visits to supermarkets. Of these, 77.3 percent of the fast food and 78.6 percent supermarket visits were GPS-sensed using the +/-10-minute time window. At this time window, the mean travel-diary reported fast food visit duration was 14.5 minutes (SD 20.2), 1.7 minutes longer than the GPS-sensed visit. For supermarkets, the reported visit duration was 23.7 minutes (SD 18.9), 3.4 minutes longer than the GPS-sensed visit. Travel diaries provide reasonably accurate information on the locations and brand names of fast food restaurants and supermarkets participants report visiting.

  12. Real-time 3-D contrast-enhanced transcranial ultrasound and aberration correction.

    PubMed

    Ivancevich, Nikolas M; Pinton, Gianmarco F; Nicoletto, Heather A; Bennett, Ellen; Laskowitz, Daniel T; Smith, Stephen W

    2008-09-01

    Contrast-enhanced (CE) transcranial ultrasound (US) and reconstructed 3-D transcranial ultrasound have shown advantages over traditional methods in a variety of cerebrovascular diseases. We present the results from a novel ultrasound technique, namely real-time 3-D contrast-enhanced transcranial ultrasound. Using real-time 3-D (RT3D) ultrasound and microbubble contrast agent, we scanned 17 healthy volunteers via a single temporal window and nine via the suboccipital window and report our detection rates for the major cerebral vessels. In 71% of subjects, both of our observers identified the ipsilateral circle of Willis from the temporal window, and in 59% we imaged the entire circle of Willis. From the suboccipital window, both observers detected the entire vertebrobasilar circulation in 22% of subjects, and in 44%, the basilar artery. After performing phase aberration correction on one subject, we were able to increase the diagnostic value of the scan, detecting a vessel not present in the uncorrected scan. These preliminary results suggest that RT3D CE transcranial US and RT3D CE transcranial US with phase aberration correction have the potential to greatly impact the field of neurosonology.

  13. Real-Time 3D Contrast-Enhanced Transcranial Ultrasound and Aberration Correction

    PubMed Central

    Ivancevich, Nikolas M.; Pinton, Gianmarco F.; Nicoletto, Heather A.; Bennett, Ellen; Laskowitz, Daniel T.; Smith, Stephen W.

    2008-01-01

    Contrast-enhanced (CE) transcranial ultrasound (US) and reconstructed 3D transcranial ultrasound have shown advantages over traditional methods in a variety of cerebrovascular diseases. We present the results from a novel ultrasound technique, namely real-time 3D contrast-enhanced transcranial ultrasound. Using real-time 3D (RT3D) ultrasound and micro-bubble contrast agent, we scanned 17 healthy volunteers via a single temporal window and 9 via the sub-occipital window and report our detection rates for the major cerebral vessels. In 71% of subjects, both of our observers identified the ipsilateral circle of Willis from the temporal window, and in 59% we imaged the entire circle of Willis. From the sub-occipital window, both observers detected the entire vertebrobasilar circulation in 22% of subjects, and in 44% the basilar artery. After performing phase aberration correction on one subject, we were able to increase the diagnostic value of the scan, detecting a vessel not present in the uncorrected scan. These preliminary results suggest that RT3D CE transcranial US and RT3D CE transcranial US with phase aberration correction have the potential to greatly impact the field of neurosonology. PMID:18395321

  14. csaw: a Bioconductor package for differential binding analysis of ChIP-seq data using sliding windows

    PubMed Central

    Lun, Aaron T.L.; Smyth, Gordon K.

    2016-01-01

    Chromatin immunoprecipitation with massively parallel sequencing (ChIP-seq) is widely used to identify binding sites for a target protein in the genome. An important scientific application is to identify changes in protein binding between different treatment conditions, i.e. to detect differential binding. This can reveal potential mechanisms through which changes in binding may contribute to the treatment effect. The csaw package provides a framework for the de novo detection of differentially bound genomic regions. It uses a window-based strategy to summarize read counts across the genome. It exploits existing statistical software to test for significant differences in each window. Finally, it clusters windows into regions for output and controls the false discovery rate properly over all detected regions. The csaw package can handle arbitrarily complex experimental designs involving biological replicates. It can be applied to both transcription factor and histone mark datasets, and, more generally, to any type of sequencing data measuring genomic coverage. csaw performs favorably against existing methods for de novo DB analyses on both simulated and real data. csaw is implemented as a R software package and is freely available from the open-source Bioconductor project. PMID:26578583

  15. An Analysis of Peer-Reviewed Scores and Impact Factors with Different Citation Time Windows: A Case Study of 28 Ophthalmologic Journals

    PubMed Central

    Liu, Xue-Li; Gai, Shuang-Shuang; Zhang, Shi-Le; Wang, Pu

    2015-01-01

    Background An important attribute of the traditional impact factor was the controversial 2-year citation window. So far, several scholars have proposed using different citation time windows for evaluating journals. However, there is no confirmation whether a longer citation time window would be better. How did the journal evaluation effects of 3IF, 4IF, and 6IF comparing with 2IF and 5IF? In order to understand these questions, we made a comparative study of impact factors with different citation time windows with the peer-reviewed scores of ophthalmologic journals indexed by Science Citation Index Expanded (SCIE) database. Methods The peer-reviewed scores of 28 ophthalmologic journals were obtained through a self-designed survey questionnaire. Impact factors with different citation time windows (including 2IF, 3IF, 4IF, 5IF, and 6IF) of 28 ophthalmologic journals were computed and compared in accordance with each impact factor’s definition and formula, using the citation analysis function of the Web of Science (WoS) database. An analysis of the correlation between impact factors with different citation time windows and peer-reviewed scores was carried out. Results Although impact factor values with different citation time windows were different, there was a high level of correlation between them when it came to evaluating journals. In the current study, for ophthalmologic journals’ impact factors with different time windows in 2013, 3IF and 4IF seemed the ideal ranges for comparison, when assessed in relation to peer-reviewed scores. In addition, the 3-year and 4-year windows were quite consistent with the cited peak age of documents published by ophthalmologic journals. Research Limitations Our study is based on ophthalmology journals and we only analyze the impact factors with different citation time window in 2013, so it has yet to be ascertained whether other disciplines (especially those with a later cited peak) or other years would follow the same or similar patterns. Originality/ Value We designed the survey questionnaire ourselves, specifically to assess the real influence of journals. We used peer-reviewed scores to judge the journal evaluation effect of impact factors with different citation time windows. The main purpose of this study was to help researchers better understand the role of impact factors with different citation time windows in journal evaluation. PMID:26295157

  16. An Analysis of Peer-Reviewed Scores and Impact Factors with Different Citation Time Windows: A Case Study of 28 Ophthalmologic Journals.

    PubMed

    Liu, Xue-Li; Gai, Shuang-Shuang; Zhang, Shi-Le; Wang, Pu

    2015-01-01

    An important attribute of the traditional impact factor was the controversial 2-year citation window. So far, several scholars have proposed using different citation time windows for evaluating journals. However, there is no confirmation whether a longer citation time window would be better. How did the journal evaluation effects of 3IF, 4IF, and 6IF comparing with 2IF and 5IF? In order to understand these questions, we made a comparative study of impact factors with different citation time windows with the peer-reviewed scores of ophthalmologic journals indexed by Science Citation Index Expanded (SCIE) database. The peer-reviewed scores of 28 ophthalmologic journals were obtained through a self-designed survey questionnaire. Impact factors with different citation time windows (including 2IF, 3IF, 4IF, 5IF, and 6IF) of 28 ophthalmologic journals were computed and compared in accordance with each impact factor's definition and formula, using the citation analysis function of the Web of Science (WoS) database. An analysis of the correlation between impact factors with different citation time windows and peer-reviewed scores was carried out. Although impact factor values with different citation time windows were different, there was a high level of correlation between them when it came to evaluating journals. In the current study, for ophthalmologic journals' impact factors with different time windows in 2013, 3IF and 4IF seemed the ideal ranges for comparison, when assessed in relation to peer-reviewed scores. In addition, the 3-year and 4-year windows were quite consistent with the cited peak age of documents published by ophthalmologic journals. Our study is based on ophthalmology journals and we only analyze the impact factors with different citation time window in 2013, so it has yet to be ascertained whether other disciplines (especially those with a later cited peak) or other years would follow the same or similar patterns. We designed the survey questionnaire ourselves, specifically to assess the real influence of journals. We used peer-reviewed scores to judge the journal evaluation effect of impact factors with different citation time windows. The main purpose of this study was to help researchers better understand the role of impact factors with different citation time windows in journal evaluation.

  17. [Real-time detection and processing of medical signals under windows using Lcard analog interfaces].

    PubMed

    Kuz'min, A A; Belozerov, A E; Pronin, T V

    2008-01-01

    Multipurpose modular software for an analog interface based on Lcard 761 is considered. Algorithms for pipeline processing of medical signals under Windows with dynamic control of computational resources are suggested. The software consists of user-friendly completable modifiable modules. The module hierarchy is based on object-oriented heritage principles, which make it possible to construct various real-time systems for long-term detection, processing, and imaging of multichannel medical signals.

  18. Validation of Models Used to Inform Colorectal Cancer Screening Guidelines: Accuracy and Implications.

    PubMed

    Rutter, Carolyn M; Knudsen, Amy B; Marsh, Tracey L; Doria-Rose, V Paul; Johnson, Eric; Pabiniak, Chester; Kuntz, Karen M; van Ballegooijen, Marjolein; Zauber, Ann G; Lansdorp-Vogelaar, Iris

    2016-07-01

    Microsimulation models synthesize evidence about disease processes and interventions, providing a method for predicting long-term benefits and harms of prevention, screening, and treatment strategies. Because models often require assumptions about unobservable processes, assessing a model's predictive accuracy is important. We validated 3 colorectal cancer (CRC) microsimulation models against outcomes from the United Kingdom Flexible Sigmoidoscopy Screening (UKFSS) Trial, a randomized controlled trial that examined the effectiveness of one-time flexible sigmoidoscopy screening to reduce CRC mortality. The models incorporate different assumptions about the time from adenoma initiation to development of preclinical and symptomatic CRC. Analyses compare model predictions to study estimates across a range of outcomes to provide insight into the accuracy of model assumptions. All 3 models accurately predicted the relative reduction in CRC mortality 10 years after screening (predicted hazard ratios, with 95% percentile intervals: 0.56 [0.44, 0.71], 0.63 [0.51, 0.75], 0.68 [0.53, 0.83]; estimated with 95% confidence interval: 0.56 [0.45, 0.69]). Two models with longer average preclinical duration accurately predicted the relative reduction in 10-year CRC incidence. Two models with longer mean sojourn time accurately predicted the number of screen-detected cancers. All 3 models predicted too many proximal adenomas among patients referred to colonoscopy. Model accuracy can only be established through external validation. Analyses such as these are therefore essential for any decision model. Results supported the assumptions that the average time from adenoma initiation to development of preclinical cancer is long (up to 25 years), and mean sojourn time is close to 4 years, suggesting the window for early detection and intervention by screening is relatively long. Variation in dwell time remains uncertain and could have important clinical and policy implications. © The Author(s) 2016.

  19. Broad-spectrum photoprotection: the roles of tinted auto windows, sunscreens and browning agents in the diagnosis and treatment of photosensitivity.

    PubMed

    Johnson, J A; Fusaro, R M

    1992-01-01

    Since window glass absorbs sunlight below 320 nm, it provides a means of assessing sensitivity to longer wavelengths, i.e. UVA and visible radiation. Positive responses to the query of whether symptoms develop in the auto with the windows up must now be interpreted with regard to the possible presence of tinted plastic film on side and rear windows. These films block nearly all UVA radiation, as does the plastic interleaf of windshields. Thus, occupants of an auto equipped with plastic film receive photoprotection from UVB radiation and well into the UVA region. We define three classes of topical sunscreens: (1) conventional UVB screens, (2) broad-spectrum preparations containing a UVB screen and a UVA absorber and (3) browning agents such as dihydroxyacetone (DHA) that produce a skin coloration that absorbs in the low end of the visible region, with overlap into long-wavelength UVA. By considering responses of photosensitive persons in autos with tinted or untinted windows, coupled with efficacy of appropriate sunscreens, we produced an algorithm defining three photosensitivity subsets. Persons sensitive to long-wavelength UVA and/or visible radiation will benefit from tinted auto windows. In particular, patients with lupus erythematosus (LE) have actively promoted legislation allowing tinted windows. Support for their position is documented by recent reports of induction of lesions in LE patients by exposure to UVA and visible radiation. The brown color produced by DHA is a useful adjunct to the screening action of broad-spectrum sunscreens. Development of a durable color overnight allows application of the DHA preparation in the evening, thus eliminating possible interference with sunscreen use during the day.

  20. Impact of Windows and Daylight Exposure on Overall Health and Sleep Quality of Office Workers: A Case-Control Pilot Study

    PubMed Central

    Boubekri, Mohamed; Cheung, Ivy N.; Reid, Kathryn J.; Wang, Chia-Hui; Zee, Phyllis C.

    2014-01-01

    Study Objective: This research examined the impact of daylight exposure on the health of office workers from the perspective of subjective well-being and sleep quality as well as actigraphy measures of light exposure, activity, and sleep-wake patterns. Methods: Participants (N = 49) included 27 workers working in windowless environments and 22 comparable workers in workplaces with significantly more daylight. Windowless environment is defined as one without any windows or one where workstations were far away from windows and without any exposure to daylight. Well-being of the office workers was measured by Short Form-36 (SF-36), while sleep quality was measured by Pittsburgh Sleep Quality Index (PSQI). In addition, a subset of participants (N = 21; 10 workers in windowless environments and 11 workers in workplaces with windows) had actigraphy recordings to measure light exposure, activity, and sleep-wake patterns. Results: Workers in windowless environments reported poorer scores than their counterparts on two SF-36 dimensions—role limitation due to physical problems and vitality—as well as poorer overall sleep quality from the global PSQI score and the sleep disturbances component of the PSQI. Compared to the group without windows, workers with windows at the workplace had more light exposure during the workweek, a trend toward more physical activity, and longer sleep duration as measured by actigraphy. Conclusions: We suggest that architectural design of office environments should place more emphasis on sufficient daylight exposure of the workers in order to promote office workers' health and well-being. Citation: Boubekri M, Cheung IN, Reid KJ, Wang CH, Zee PC. Impact of windows and daylight exposure on overall health and sleep quality of office workers: a case-control pilot study. J Clin Sleep Med 2014;10(6):603-611. PMID:24932139

  1. Temporal integration at consecutive processing stages in the auditory pathway of the grasshopper.

    PubMed

    Wirtssohn, Sarah; Ronacher, Bernhard

    2015-04-01

    Temporal integration in the auditory system of locusts was quantified by presenting single clicks and click pairs while performing intracellular recordings. Auditory neurons were studied at three processing stages, which form a feed-forward network in the metathoracic ganglion. Receptor neurons and most first-order interneurons ("local neurons") encode the signal envelope, while second-order interneurons ("ascending neurons") tend to extract more complex, behaviorally relevant sound features. In different neuron types of the auditory pathway we found three response types: no significant temporal integration (some ascending neurons), leaky energy integration (receptor neurons and some local neurons), and facilitatory processes (some local and ascending neurons). The receptor neurons integrated input over very short time windows (<2 ms). Temporal integration on longer time scales was found at subsequent processing stages, indicative of within-neuron computations and network activity. These different strategies, realized at separate processing stages and in parallel neuronal pathways within one processing stage, could enable the grasshopper's auditory system to evaluate longer time windows and thus to implement temporal filters, while at the same time maintaining a high temporal resolution. Copyright © 2015 the American Physiological Society.

  2. Compensation for Blur Requires Increase in Field of View and Viewing Time

    PubMed Central

    Kwon, MiYoung; Liu, Rong; Chien, Lillian

    2016-01-01

    Spatial resolution is an important factor for human pattern recognition. In particular, low resolution (blur) is a defining characteristic of low vision. Here, we examined spatial (field of view) and temporal (stimulus duration) requirements for blurry object recognition. The spatial resolution of an image such as letter or face, was manipulated with a low-pass filter. In experiment 1, studying spatial requirement, observers viewed a fixed-size object through a window of varying sizes, which was repositioned until object identification (moving window paradigm). Field of view requirement, quantified as the number of “views” (window repositions) for correct recognition, was obtained for three blur levels, including no blur. In experiment 2, studying temporal requirement, we determined threshold viewing time, the stimulus duration yielding criterion recognition accuracy, at six blur levels, including no blur. For letter and face recognition, we found blur significantly increased the number of views, suggesting a larger field of view is required to recognize blurry objects. We also found blur significantly increased threshold viewing time, suggesting longer temporal integration is necessary to recognize blurry objects. The temporal integration reflects the tradeoff between stimulus intensity and time. While humans excel at recognizing blurry objects, our findings suggest compensating for blur requires increased field of view and viewing time. The need for larger spatial and longer temporal integration for recognizing blurry objects may further challenge object recognition in low vision. Thus, interactions between blur and field of view should be considered for developing low vision rehabilitation or assistive aids. PMID:27622710

  3. Method and apparatus for monitoring the flow of mercury in a system

    DOEpatents

    Grossman, Mark W.

    1987-01-01

    An apparatus and method for monitoring the flow of mercury in a system. The equipment enables the entrainment of the mercury in a carrier gas e.g., an inert gas, which passes as mercury vapor between a pair of optically transparent windows. The attenuation of the emission is indicative of the quantity of mercury (and its isotopes) in the system. A 253.7 nm light is shone through one of the windows and the unabsorbed light is detected through the other window. The absorption of the 253.7 nm light is thereby measured whereby the quantity of mercury passing between the windows can be determined. The apparatus includes an in-line sensor for measuring the quantity of mercury. It includes a conduit together with a pair of apertures disposed in a face to face relationship and arranged on opposite sides of the conduit. A pair of optically transparent windows are disposed upon a pair of viewing tubes. A portion of each of the tubes is disposed inside of the conduit and within each of the apertures. The two windows are disposed in a face to face relationship on the ends of the viewing tubes and the entire assembly is hermetically sealed from the atmosphere whereby when 253.7 nm ultraviolet light is shone through one of the windows and detected through the other, the quantity of mercury which is passing by can be continuously monitored due to absorption which is indicated by attenuation of the amplitude of the observed emission.

  4. Robotic Attention Processing And Its Application To Visual Guidance

    NASA Astrophysics Data System (ADS)

    Barth, Matthew; Inoue, Hirochika

    1988-03-01

    This paper describes a method of real-time visual attention processing for robots performing visual guidance. This robot attention processing is based on a novel vision processor, the multi-window vision system that was developed at the University of Tokyo. The multi-window vision system is unique in that it only processes visual information inside local area windows. These local area windows are quite flexible in their ability to move anywhere on the visual screen, change their size and shape, and alter their pixel sampling rate. By using these windows for specific attention tasks, it is possible to perform high speed attention processing. The primary attention skills of detecting motion, tracking an object, and interpreting an image are all performed at high speed on the multi-window vision system. A basic robotic attention scheme using the attention skills was developed. The attention skills involved detection and tracking of salient visual features. The tracking and motion information thus obtained was utilized in producing the response to the visual stimulus. The response of the attention scheme was quick enough to be applicable to the real-time vision processing tasks of playing a video 'pong' game, and later using an automobile driving simulator. By detecting the motion of a 'ball' on a video screen and then tracking the movement, the attention scheme was able to control a 'paddle' in order to keep the ball in play. The response was faster than that of a human's, allowing the attention scheme to play the video game at higher speeds. Further, in the application to the driving simulator, the attention scheme was able to control both direction and velocity of a simulated vehicle following a lead car. These two applications show the potential of local visual processing in its use for robotic attention processing.

  5. Was Mackenbach right? Towards a practical political science of redistribution and health inequalities.

    PubMed

    Schrecker, Ted

    2017-07-01

    In 2010, Mackenbach reflected on England's lack of success in reducing health inequalities between 1997 and 2010, asserting that "it is difficult to imagine a longer window of opportunity for tackling health inequalities"; asking "[i]f this did not work, what will?"; and concluding that reducing health inequalities was not politically feasible at least in that jurisdiction. Exploring the empirics of that observation offers a window into the politics of reducing health inequalities. For purposes of future comparative research, I outline three (not mutually exclusive) perspectives on political feasibility, identify their implications for a political science of health inequalities, and explore what they mean for advocacy in support of reducing those inequalities. Copyright © 2017 Elsevier Ltd. All rights reserved.

  6. Changes in seasonal streamflow extremes experienced in rivers of Northwestern South America (Colombia)

    NASA Astrophysics Data System (ADS)

    Pierini, J. O.; Restrepo, J. C.; Aguirre, J.; Bustamante, A. M.; Velásquez, G. J.

    2017-04-01

    A measure of the variability in seasonal extreme streamflow was estimated for the Colombian Caribbean coast, using monthly time series of freshwater discharge from ten watersheds. The aim was to detect modifications in the streamflow monthly distribution, seasonal trends, variance and extreme monthly values. A 20-year length time moving window, with 1-year successive shiftments, was applied to the monthly series to analyze the seasonal variability of streamflow. The seasonal-windowed data were statistically fitted through the Gamma distribution function. Scale and shape parameters were computed using the Maximum Likelihood Estimation (MLE) and the bootstrap method for 1000 resample. A trend analysis was performed for each windowed-serie, allowing to detect the window of maximum absolute values for trends. Significant temporal shifts in seasonal streamflow distribution and quantiles (QT), were obtained for different frequencies. Wet and dry extremes periods increased significantly in the last decades. Such increase did not occur simultaneously through the region. Some locations exhibited continuous increases only at minimum QT.

  7. Effects of Kapton Sample Cell Windows on the Detection Limit of Smectite: Implications for CheMin on the Mars Science Laboratory Mission

    NASA Technical Reports Server (NTRS)

    Achilles, C. N.; Ming, Douglas W.; Morris, R. V.; Blake, D. F.

    2012-01-01

    The CheMin instrument on the Mars Science Laboratory (MSL) rover Curiosity is an X-ray diffraction (XRD) and X-ray fluorescence (XRF) instrument capable of providing the mineralogical and chemical compositions of rocks and soils on the surface of Mars. CheMin uses a microfocus X-ray tube with a Co target, transmission geometry, and an energy-discriminating X-ray sensitive CCD to produce simultaneous 2-D XRD patterns and energy-dispersive X-ray histograms from powdered samples. CheMin has two different window materials used for sample cells -- Mylar and Kapton. Instrument details are provided elsewhere. Fe/Mg-smectite (e.g., nontronite) has been identified in Gale Crater, the MSL future landing site, by CRISM spectra. While large quantities of phyllosilicate minerals will be easily detected by CheMin, it is important to establish detection limits of such phases to understand capabilities and limitations of the instrument. A previous study indicated that the (001) peak of smectite at 15 Ang was detectable in a mixture of 1 wt.% smectite with olivine when Mylar is the window material for the sample cell. Complications arise when Kapton is the window material because Kapton itself also has a diffraction peak near 15 Ang (6.8 deg 2 Theta). This study presents results of mineral mixtures of smectite and olivine to determine smectite detection limits for Kapton sample cells. Because the intensity and position of the smectite (001) peak depends on the hydration state, we also analyzed mixtures with "hydrated" and "dehydrated"h smectite to examine the effects of hydration state on detection limits.

  8. Validation of vision-based obstacle detection algorithms for low-altitude helicopter flight

    NASA Technical Reports Server (NTRS)

    Suorsa, Raymond; Sridhar, Banavar

    1991-01-01

    A validation facility being used at the NASA Ames Research Center is described which is aimed at testing vision based obstacle detection and range estimation algorithms suitable for low level helicopter flight. The facility is capable of processing hundreds of frames of calibrated multicamera 6 degree-of-freedom motion image sequencies, generating calibrated multicamera laboratory images using convenient window-based software, and viewing range estimation results from different algorithms along with truth data using powerful window-based visualization software.

  9. State-of-the-art software for window energy-efficiency rating and labeling

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Arasteh, D.; Finlayson, E.; Huang, J.

    1998-07-01

    Measuring the thermal performance of windows in typical residential buildings is an expensive proposition. Not only is laboratory testing expensive, but each window manufacturer typically offers hundreds of individual products, each of which has different thermal performance properties. With over a thousand window manufacturers nationally, a testing-based rating system would be prohibitively expensive to the industry and to consumers. Beginning in the early 1990s, simulation software began to be used as part of a national program for rating window U-values. The rating program has since been expanded to include Solar Hear Gain Coefficients and is now being extended to annualmore » energy performance. This paper describes four software packages available to the public from Lawrence Berkeley National Laboratory (LBNL). These software packages are used to evaluate window thermal performance: RESFEN (for evaluating annual energy costs), WINDOW (for calculating a product`s thermal performance properties), THERM (a preprocessor for WINDOW that determines two-dimensional heat-transfer effects), and Optics (a preprocessor for WINDOW`s glass database). Software not only offers a less expensive means than testing to evaluate window performance, it can also be used during the design process to help manufacturers produce windows that will meet target specifications. In addition, software can show small improvements in window performance that might not be detected in actual testing because of large uncertainties in test procedures.« less

  10. Round window plugging in the treatment of superior semicircular canal dehiscence.

    PubMed

    Succar, Eric F; Manickam, Periakaruppan V; Wing, Sara; Walter, Jeffrey; Greene, Joseph S; Azeredo, William J

    2018-06-01

    Objectives were to describe the use of round window plugging for superior semicircular canal dehiscence syndrome and review further recommendations regarding the procedure based on our experience and to compare results with recent literature on round window plugging. Retrospective case series. Fourteen patients underwent round window plugging for superior semicircular canal dehiscence at our institution from 2012 to 2015. All patients underwent the same surgical procedure. Available pre- and postoperative data were reviewed. Fourteen patient charts were reviewed. Symptoms of autophony improved in nine of 14 (64%) patients. Symptoms of pressure-induced vertigo improved in seven of 12 (58%) patients. Hennebert's sign that was positive preoperatively only improved in one of six (17%) patients. A positive preoperative vestibular evoked myogenic potential improved in only one of six (17%) patients. Six of 13 (46%) patients had increased air conduction thresholds postoperatively. Round window plugging has been described as a less-invasive treatment for patients with superior semicircular canal dehiscence. Although the procedure did benefit some of our patients, successful outcomes were not predictable. Improvement in at least one objective finding was seen in only 21% of the patients studied. Hennebert's sign and vestibular evoked myogenic potentials that were positive preoperatively only improved in 17% of patients. At our institution, round window plugging is no longer considered a reasonable treatment option for most patients with superior semicircular canal dehiscence. We recommend that further study on this topic follow a standardized pre- and postoperative assessment. 4. Laryngoscope, 128:1445-1452, 2018. © 2017 The American Laryngological, Rhinological and Otological Society, Inc.

  11. Evaluation of markers out of the steroid profile for the screening of testosterone misuse. Part II: Intramuscular administration.

    PubMed

    Kotronoulas, Aristotelis; Gomez-Gómez, Àlex; Fabregat, Andreu; Segura, Jordi; Yang, Sheng; Xing, Yanyi; Moutian, Wu; Marcos, Josep; Joglar, Jesús; Ventura, Rosa; Pozo, Oscar J

    2018-05-01

    In the fight against doping, the introduction of alternative markers to the steroid profile can be considered as an effective approach to improve the screening capabilities for the detection of testosterone (T) misuse. The aim of this study was to evaluate the potential of several T metabolites (cysteinyl conjugated and glucuronoconjugated resistant to enzymatic hydrolysis) to detect both the transdermal and the intramuscular administration of T. In Part I of the study, we studied the potential of these metabolites for the detection of T transdermal administration. Results revealed that resistant glucuronides can be a suitable complement to the current steroid profile. In this, Part II, dedicated to the intramuscular administration, we studied the potential of cysteinyl conjugated, resistant glucuronoconjugated and 1-cyclopentenoylglycine (1-CPG) for the detection of a single intramuscular injection of T cypionate. Possible differences in the excretion profile of all markers were explored between individuals with low basal (n=6) and medium basal (n=6) values of the testosterone/epitestosterone ratio (T/E). The results showed that all tested markers presented low intra-individual stability in basal conditions. Despite this, all glucuronoconjugated markers and 1-CPG, but not the cysteinyl conjugated markers, provided detection windows that were similar or longer than those obtained by markers currently included in the steroid profile. Based on the results obtained from the 2 parts of this study and from previously reported data, the potential applicability and the limitations of including these markers in the steroid profile are discussed. Copyright © 2017 John Wiley & Sons, Ltd.

  12. Towards a portable Raman spectrometer using a concave grating and a time-gated CMOS SPAD.

    PubMed

    Li, Zhiyun; Deen, M Jamal

    2014-07-28

    A low-cost, compact Raman spectrometer suitable for the on-line water monitoring applications is explored. A custom-designed concave grating for wavelength selection was fabricated and tested. The detection of the Raman signal is accomplished with a time-gated single photon avalanche diode (TG-SPAD). A fixed gate window of 3.5ns is designed and applied to the TG-SPAD. The temporal resolution of the SPAD was ~60ps when tested with a 7ps, 532nm solid-state laser. To test the efficiency of the gating in fluorescence signal suppression, different detection windows (3ns-0.25ns) within the 3.5ns gate window are used to measure the Raman spectra of Rhodamine B. Strong Raman peaks are resolved with this low-cost system.

  13. Brain early infarct detection using gamma correction extreme-level eliminating with weighting distribution.

    PubMed

    Teh, V; Sim, K S; Wong, E K

    2016-11-01

    According to the statistic from World Health Organization (WHO), stroke is one of the major causes of death globally. Computed tomography (CT) scan is one of the main medical diagnosis system used for diagnosis of ischemic stroke. CT scan provides brain images in Digital Imaging and Communication in Medicine (DICOM) format. The presentation of CT brain images is mainly relied on the window setting (window center and window width), which converts an image from DICOM format into normal grayscale format. Nevertheless, the ordinary window parameter could not deliver a proper contrast on CT brain images for ischemic stroke detection. In this paper, a new proposed method namely gamma correction extreme-level eliminating with weighting distribution (GCELEWD) is implemented to improve the contrast on CT brain images. GCELEWD is capable of highlighting the hypodense region for diagnosis of ischemic stroke. The performance of this new proposed technique, GCELEWD, is compared with four of the existing contrast enhancement technique such as brightness preserving bi-histogram equalization (BBHE), dualistic sub-image histogram equalization (DSIHE), extreme-level eliminating histogram equalization (ELEHE), and adaptive gamma correction with weighting distribution (AGCWD). GCELEWD shows better visualization for ischemic stroke detection and higher values with image quality assessment (IQA) module. SCANNING 38:842-856, 2016. © 2016 Wiley Periodicals, Inc. © Wiley Periodicals, Inc.

  14. [Online endpoint detection algorithm for blending process of Chinese materia medica].

    PubMed

    Lin, Zhao-Zhou; Yang, Chan; Xu, Bing; Shi, Xin-Yuan; Zhang, Zhi-Qiang; Fu, Jing; Qiao, Yan-Jiang

    2017-03-01

    Blending process, which is an essential part of the pharmaceutical preparation, has a direct influence on the homogeneity and stability of solid dosage forms. With the official release of Guidance for Industry PAT, online process analysis techniques have been more and more reported in the applications in blending process, but the research on endpoint detection algorithm is still in the initial stage. By progressively increasing the window size of moving block standard deviation (MBSD), a novel endpoint detection algorithm was proposed to extend the plain MBSD from off-line scenario to online scenario and used to determine the endpoint in the blending process of Chinese medicine dispensing granules. By online learning of window size tuning, the status changes of the materials in blending process were reflected in the calculation of standard deviation in a real-time manner. The proposed method was separately tested in the blending processes of dextrin and three other extracts of traditional Chinese medicine. All of the results have shown that as compared with traditional MBSD method, the window size changes according to the proposed MBSD method (progressively increasing the window size) could more clearly reflect the status changes of the materials in blending process, so it is suitable for online application. Copyright© by the Chinese Pharmaceutical Association.

  15. Optical Observations of GEO Debris with Two Telescopes

    NASA Technical Reports Server (NTRS)

    Seitzer, P.; Abercromby, K.; Rodriguez, H.; Barker, E.

    2007-01-01

    For several years, the Michigan Orbital DEbris Survey Telescope (MODEST), the University of Michigan s 0.6/0.9-m Schmidt telescope on Cerro Tololo Inter-American Observatory in Chile has been used to survey the debris population at GEO in the visible regime. Magnitudes, positions, and angular rates are determined for GEO objects as they move across the telescope s field-of-view (FOV) during a 5-minute window. This short window of time is not long enough to determine a full six parameter orbit so usually a circular orbit is assumed. A longer arc of time is necessary to determine eccentricity and to look for changes in the orbit with time. MODEST can follow objects in real-time, but only at the price of stopping survey operations. A second telescope would allow for longer arcs of orbit to obtain the full six orbital parameters, as well as assess the changes over time. An additional benefit of having a second telescope is the capability of obtaining BVRI colors of the faint targets, aiding efforts to determine the material type of faint debris. For 14 nights in March 2007, two telescopes were used simultaneously to observe the GEO debris field. MODEST was used exclusively in survey mode. As objects were detected, they were handed off in near real-time to the Cerro Tololo 0.9-m telescope for follow-up observations. The goal was to determine orbits and colors for all objects fainter than R = 15th magnitude (corresponds to 1 meter in size assuming a 0.2 albedo) detected by MODEST. The hand-off process was completely functional during the final eight nights and follow-ups for objects from night-to-night were possible. The cutoff magnitude level of 15th was selected on the basis of an abrupt change in the observed angular rate distribution in the MODEST surveys. Objects brighter than 15th magnitude tend to lie on a well defined locus in the angular rate plane (and have orbits in the catalog), while fainter objects fill the plane almost uniformly. We need to determine full six-parameter orbits to investigate what causes this change in observed angular rates. Are these faint objects either the same population of high area-to-mass (A/M) objects on eccentric orbits as discovered by the ESA Space Debris Telescope (Schildknecht, et al. 2004), or are they just normal debris from breakups in GEO?

  16. Method and apparatus for monitoring the flow of mercury in a system

    DOEpatents

    Grossman, M.W.

    1987-12-15

    An apparatus and method for monitoring the flow of mercury in a system are disclosed. The equipment enables the entrainment of the mercury in a carrier gas e.g., an inert gas, which passes as mercury vapor between a pair of optically transparent windows. The attenuation of the emission is indicative of the quantity of mercury (and its isotopes) in the system. A 253.7 nm light is shone through one of the windows and the unabsorbed light is detected through the other window. The absorption of the 253.7 nm light is thereby measured whereby the quantity of mercury passing between the windows can be determined. The apparatus includes an in-line sensor for measuring the quantity of mercury. It includes a conduit together with a pair of apertures disposed in a face to face relationship and arranged on opposite sides of the conduit. A pair of optically transparent windows are disposed upon a pair of viewing tubes. A portion of each of the tubes is disposed inside of the conduit and within each of the apertures. The two windows are disposed in a face to face relationship on the ends of the viewing tubes and the entire assembly is hermetically sealed from the atmosphere whereby when 253.7 nm ultraviolet light is shone through one of the windows and detected through the other, the quantity of mercury which is passing by can be continuously monitored due to absorption which is indicated by attenuation of the amplitude of the observed emission. 4 figs.

  17. Variation in bird-window collision mortality and scavenging rates within an urban landscape

    EPA Science Inventory

    Annual avian mortality from collisions with windows and buildings is estimated to range from a million to a billion birds in the United States alone. However, estimates of mortality based on carcass counts suffer from bias due to imperfect detection and carcass scavenging. We stu...

  18. Endpoint in plasma etch process using new modified w-multivariate charts and windowed regression

    NASA Astrophysics Data System (ADS)

    Zakour, Sihem Ben; Taleb, Hassen

    2017-09-01

    Endpoint detection is very important undertaking on the side of getting a good understanding and figuring out if a plasma etching process is done in the right way, especially if the etched area is very small (0.1%). It truly is a crucial part of supplying repeatable effects in every single wafer. When the film being etched has been completely cleared, the endpoint is reached. To ensure the desired device performance on the produced integrated circuit, the high optical emission spectroscopy (OES) sensor is employed. The huge number of gathered wavelengths (profiles) is then analyzed and pre-processed using a new proposed simple algorithm named Spectra peak selection (SPS) to select the important wavelengths, then we employ wavelet analysis (WA) to enhance the performance of detection by suppressing noise and redundant information. The selected and treated OES wavelengths are then used in modified multivariate control charts (MEWMA and Hotelling) for three statistics (mean, SD and CV) and windowed polynomial regression for mean. The employ of three aforementioned statistics is motivated by controlling mean shift, variance shift and their ratio (CV) if both mean and SD are not stable. The control charts show their performance in detecting endpoint especially W-mean Hotelling chart and the worst result is given by CV statistic. As the best detection of endpoint is given by the W-Hotelling mean statistic, this statistic will be used to construct a windowed wavelet Hotelling polynomial regression. This latter can only identify the window containing endpoint phenomenon.

  19. Kepler Planet Detection Metrics: Window and One-Sigma Depth Functions for Data Release 25

    NASA Technical Reports Server (NTRS)

    Burke, Christopher J.; Catanzarite, Joseph

    2017-01-01

    This document describes the window and one-sigma depth functions relevant to the Transiting Planet Search (TPS) algorithm in the Kepler pipeline (Jenkins 2002; Jenkins et al. 2017). The window function specifies the fraction of unique orbital ephemeris epochs over which three transits are observable as a function of orbital period. In this context, the epoch and orbital period, together, comprise the ephemeris of an orbiting companion, and ephemerides with the same period are considered equivalent if their epochs differ by an integer multiple of the period. The one-sigma depth function specifies the depth of a signal (in ppm) for a given light curve that results in a one-sigma detection of a transit signature as a function of orbital period when averaged over all unique orbital ephemerides. These planet detection metrics quantify the ability of TPS to detect a transiting planet signature on a star-by-star basis. They are uniquely applicable to a specific Kepler data release, since they are dependent on the details of the light curves searched and the functionality of the TPS algorithm used to perform the search. This document describes the window and one-sigma depth functions relevant to Kepler Data Release 25 (DR25), where the data were processed (Thompson et al. 2016) and searched (Twicken et al. 2016) with the SOC 9.3 pipeline. In Section 4, we describe significant differences from those reported in Kepler Data Release 24 (Burke Seader 2016) and document our verification method.

  20. Mismatch negativity to acoustical illusion of beat: how and where the change detection takes place?

    PubMed

    Chakalov, Ivan; Paraskevopoulos, Evangelos; Wollbrink, Andreas; Pantev, Christo

    2014-10-15

    In case of binaural presentation of two tones with slightly different frequencies the structures of brainstem can no longer follow the interaural time differences (ITD) resulting in an illusionary perception of beat corresponding to frequency difference between the two prime tones. Hence, the beat-frequency does not exist in the prime tones presented to either ear. This study used binaural beats to explore the nature of acoustic deviance detection in humans by means of magnetoencephalography (MEG). Recent research suggests that the auditory change detection is a multistage process. To test this, we employed 26 Hz-binaural beats in a classical oddball paradigm. However, the prime tones (250 Hz and 276 Hz) were switched between the ears in the case of the deviant-beat. Consequently, when the deviant is presented, the cochleae and auditory nerves receive a "new afferent", although the standards and the deviants are heard identical (26 Hz-beats). This allowed us to explore the contribution of auditory periphery to change detection process, and furthermore, to evaluate its influence on beats-related auditory steady-state responses (ASSRs). LORETA-source current density estimates of the evoked fields in a typical mismatch negativity time-window (MMN) and the subsequent difference-ASSRs were determined and compared. The results revealed an MMN generated by a complex neural network including the right parietal lobe and the left middle frontal gyrus. Furthermore, difference-ASSR was generated in the paracentral gyrus. Additionally, psychophysical measures showed no perceptual difference between the standard- and deviant-beats when isolated by noise. These results suggest that the auditory periphery has an important contribution to novelty detection already at sub-cortical level. Overall, the present findings support the notion of hierarchically organized acoustic novelty detection system. Copyright © 2014 Elsevier Inc. All rights reserved.

  1. Improved scatterer property estimates from ultrasound backscatter for small gate lengths using a gate-edge correction factor

    NASA Astrophysics Data System (ADS)

    Oelze, Michael L.; O'Brien, William D.

    2004-11-01

    Backscattered rf signals used to construct conventional ultrasound B-mode images contain frequency-dependent information that can be examined through the backscattered power spectrum. The backscattered power spectrum is found by taking the magnitude squared of the Fourier transform of a gated time segment corresponding to a region in the scattering volume. When a time segment is gated, the edges of the gated regions change the frequency content of the backscattered power spectrum due to truncating of the waveform. Tapered windows, like the Hanning window, and longer gate lengths reduce the relative contribution of the gate-edge effects. A new gate-edge correction factor was developed that partially accounted for the edge effects. The gate-edge correction factor gave more accurate estimates of scatterer properties at small gate lengths compared to conventional windowing functions. The gate-edge correction factor gave estimates of scatterer properties within 5% of actual values at very small gate lengths (less than 5 spatial pulse lengths) in both simulations and from measurements on glass-bead phantoms. While the gate-edge correction factor gave higher accuracy of estimates at smaller gate lengths, the precision of estimates was not improved at small gate lengths over conventional windowing functions. .

  2. Developmental time windows for axon growth influence neuronal network topology.

    PubMed

    Lim, Sol; Kaiser, Marcus

    2015-04-01

    Early brain connectivity development consists of multiple stages: birth of neurons, their migration and the subsequent growth of axons and dendrites. Each stage occurs within a certain period of time depending on types of neurons and cortical layers. Forming synapses between neurons either by growing axons starting at similar times for all neurons (much-overlapped time windows) or at different time points (less-overlapped) may affect the topological and spatial properties of neuronal networks. Here, we explore the extreme cases of axon formation during early development, either starting at the same time for all neurons (parallel, i.e., maximally overlapped time windows) or occurring for each neuron separately one neuron after another (serial, i.e., no overlaps in time windows). For both cases, the number of potential and established synapses remained comparable. Topological and spatial properties, however, differed: Neurons that started axon growth early on in serial growth achieved higher out-degrees, higher local efficiency and longer axon lengths while neurons demonstrated more homogeneous connectivity patterns for parallel growth. Second, connection probability decreased more rapidly with distance between neurons for parallel growth than for serial growth. Third, bidirectional connections were more numerous for parallel growth. Finally, we tested our predictions with C. elegans data. Together, this indicates that time windows for axon growth influence the topological and spatial properties of neuronal networks opening up the possibility to a posteriori estimate developmental mechanisms based on network properties of a developed network.

  3. Experimental study on the crack detection with optimized spatial wavelet analysis and windowing

    NASA Astrophysics Data System (ADS)

    Ghanbari Mardasi, Amir; Wu, Nan; Wu, Christine

    2018-05-01

    In this paper, a high sensitive crack detection is experimentally realized and presented on a beam under certain deflection by optimizing spatial wavelet analysis. Due to the crack existence in the beam structure, a perturbation/slop singularity is induced in the deflection profile. Spatial wavelet transformation works as a magnifier to amplify the small perturbation signal at the crack location to detect and localize the damage. The profile of a deflected aluminum cantilever beam is obtained for both intact and cracked beams by a high resolution laser profile sensor. Gabor wavelet transformation is applied on the subtraction of intact and cracked data sets. To improve detection sensitivity, scale factor in spatial wavelet transformation and the transformation repeat times are optimized. Furthermore, to detect the possible crack close to the measurement boundaries, wavelet transformation edge effect, which induces large values of wavelet coefficient around the measurement boundaries, is efficiently reduced by introducing different windowing functions. The result shows that a small crack with depth of less than 10% of the beam height can be localized with a clear perturbation. Moreover, the perturbation caused by a crack at 0.85 mm away from one end of the measurement range, which is covered by wavelet transform edge effect, emerges by applying proper window functions.

  4. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Draelos, Timothy J.; Ballard, Sanford; Young, Christopher J.

    Given a set of observations within a specified time window, a fitness value is calculated at each grid node by summing station-specific conditional fitness values. Assuming each observation was generated by a refracted P wave, these values are proportional to the conditional probabilities that each observation was generated by a seismic event at the grid node. The node with highest fitness value is accepted as a hypothetical event location, subject to some minimal fitness value, and all arrivals within a longer time window consistent with that event are associated with it. During the association step, a variety of different phasesmore » are considered. In addition, once associated with an event, an arrival is removed from further consideration. While unassociated arrivals remain, the search for other events is repeated until none are identified.« less

  5. A simple multi-scale Gaussian smoothing-based strategy for automatic chromatographic peak extraction.

    PubMed

    Fu, Hai-Yan; Guo, Jun-Wei; Yu, Yong-Jie; Li, He-Dong; Cui, Hua-Peng; Liu, Ping-Ping; Wang, Bing; Wang, Sheng; Lu, Peng

    2016-06-24

    Peak detection is a critical step in chromatographic data analysis. In the present work, we developed a multi-scale Gaussian smoothing-based strategy for accurate peak extraction. The strategy consisted of three stages: background drift correction, peak detection, and peak filtration. Background drift correction was implemented using a moving window strategy. The new peak detection method is a variant of the system used by the well-known MassSpecWavelet, i.e., chromatographic peaks are found at local maximum values under various smoothing window scales. Therefore, peaks can be detected through the ridge lines of maximum values under these window scales, and signals that are monotonously increased/decreased around the peak position could be treated as part of the peak. Instrumental noise was estimated after peak elimination, and a peak filtration strategy was performed to remove peaks with signal-to-noise ratios smaller than 3. The performance of our method was evaluated using two complex datasets. These datasets include essential oil samples for quality control obtained from gas chromatography and tobacco plant samples for metabolic profiling analysis obtained from gas chromatography coupled with mass spectrometry. Results confirmed the reasonability of the developed method. Copyright © 2016 Elsevier B.V. All rights reserved.

  6. A probabilistic method for the estimation of residual risk in donated blood.

    PubMed

    Bish, Ebru K; Ragavan, Prasanna K; Bish, Douglas R; Slonim, Anthony D; Stramer, Susan L

    2014-10-01

    The residual risk (RR) of transfusion-transmitted infections, including the human immunodeficiency virus and hepatitis B and C viruses, is typically estimated by the incidence[Formula: see text]window period model, which relies on the following restrictive assumptions: Each screening test, with probability 1, (1) detects an infected unit outside of the test's window period; (2) fails to detect an infected unit within the window period; and (3) correctly identifies an infection-free unit. These assumptions need not hold in practice due to random or systemic errors and individual variations in the window period. We develop a probability model that accurately estimates the RR by relaxing these assumptions, and quantify their impact using a published cost-effectiveness study and also within an optimization model. These assumptions lead to inaccurate estimates in cost-effectiveness studies and to sub-optimal solutions in the optimization model. The testing solution generated by the optimization model translates into fewer expected infections without an increase in the testing cost. © The Author 2014. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  7. Windowed multitaper correlation analysis of multimodal brain monitoring parameters.

    PubMed

    Faltermeier, Rupert; Proescholdt, Martin A; Bele, Sylvia; Brawanski, Alexander

    2015-01-01

    Although multimodal monitoring sets the standard in daily practice of neurocritical care, problem-oriented analysis tools to interpret the huge amount of data are lacking. Recently a mathematical model was presented that simulates the cerebral perfusion and oxygen supply in case of a severe head trauma, predicting the appearance of distinct correlations between arterial blood pressure and intracranial pressure. In this study we present a set of mathematical tools that reliably detect the predicted correlations in data recorded at a neurocritical care unit. The time resolved correlations will be identified by a windowing technique combined with Fourier-based coherence calculations. The phasing of the data is detected by means of Hilbert phase difference within the above mentioned windows. A statistical testing method is introduced that allows tuning the parameters of the windowing method in such a way that a predefined accuracy is reached. With this method the data of fifteen patients were examined in which we found the predicted correlation in each patient. Additionally it could be shown that the occurrence of a distinct correlation parameter, called scp, represents a predictive value of high quality for the patients outcome.

  8. Houses need to breathe--right?

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sherman, Max H.

    2004-10-01

    Houses need to breathe, but we can no longer leave the important functions associated with ventilation to be met accidentally. A designed ventilation system must be considered as much a part of a home as its heating system. Windows are a key part of that system because they allow a quick increase in ventilation for unusual events, but neither they nor a leaky building shell can be counted on to provide minimum levels.

  9. Aggregation of Electric Current Consumption Features to Extract Maintenance KPIs

    NASA Astrophysics Data System (ADS)

    Simon, Victor; Johansson, Carl-Anders; Galar, Diego

    2017-09-01

    All electric powered machines offer the possibility of extracting information and calculating Key Performance Indicators (KPIs) from the electric current signal. Depending on the time window, sampling frequency and type of analysis, different indicators from the micro to macro level can be calculated for such aspects as maintenance, production, energy consumption etc. On the micro-level, the indicators are generally used for condition monitoring and diagnostics and are normally based on a short time window and a high sampling frequency. The macro indicators are normally based on a longer time window with a slower sampling frequency and are used as indicators for overall performance, cost or consumption. The indicators can be calculated directly from the current signal but can also be based on a combination of information from the current signal and operational data like rpm, position etc. One or several of those indicators can be used for prediction and prognostics of a machine's future behavior. This paper uses this technique to calculate indicators for maintenance and energy optimization in electric powered machines and fleets of machines, especially machine tools.

  10. Elimination of scattered gamma rays from injection sites using upper offset energy windows in sentinel lymph node scintigraphy.

    PubMed

    Yoneyama, Hiroto; Tsushima, Hiroyuki; Onoguchi, Masahisa; Konishi, Takahiro; Nakajima, Kenichi; Kinuya, Seigo

    2015-05-01

    The identification of sentinel lymph nodes (SLNs) near injection sites is difficult because of scattered gamma rays. The purpose of this study was to investigate the optimal energy windows for elimination of scattered gamma rays in order to improve the detection of SLNs. The clinical study group consisted of 56 female patients with breast cancer. While the energy was centred at 140 keV with a 20% window for Tc-99m, this energy window was divided into five subwindows with every 4% in planar imaging. Regions of interest were placed on SLNs and the background, and contrast was calculated using a standard equation. The confidence levels of interpretations were evaluated using a five-grade scale. The contrast provided by 145.6 keV±2% was the best, followed by 140 keV±2%, 151.2 keV±2%, 134.4 keV±2% and 128.8 keV±2% in that order. When 128.8 keV±2% and 134.4 keV±2% were eliminated from 140 keV±10% (145.6 keV±6%), the contrast of SLNs improved significantly. The confidence levels of interpretation and detection rate provided by the planar images with 140 keV±10% were 4.74±0.58 and 94.8%, respectively, and those provided by 145.6 keV±6% were 4.94±0.20 and 100%. Because lower energy windows contain many scattered gamma rays, upper offset energy windows, which exclude lower energy windows, improve the image contrast of SLNs near injection sites.

  11. Image-guided adaptive gating of lung cancer radiotherapy: a computer simulation study

    NASA Astrophysics Data System (ADS)

    Aristophanous, Michalis; Rottmann, Joerg; Park, Sang-June; Nishioka, Seiko; Shirato, Hiroki; Berbeco, Ross I.

    2010-08-01

    The purpose of this study is to investigate the effect that image-guided adaptation of the gating window during treatment could have on the residual tumor motion, by simulating different gated radiotherapy techniques. There are three separate components of this simulation: (1) the 'Hokkaido Data', which are previously measured 3D data of lung tumor motion tracks and the corresponding 1D respiratory signals obtained during the entire ungated radiotherapy treatments of eight patients, (2) the respiratory gating protocol at our institution and the imaging performed under that protocol and (3) the actual simulation in which the Hokkaido Data are used to select tumor position information that could have been collected based on the imaging performed under our gating protocol. We simulated treatments with a fixed gating window and a gating window that is updated during treatment. The patient data were divided into different fractions, each with continuous acquisitions longer than 2 min. In accordance to the imaging performed under our gating protocol, we assume that we have tumor position information for the first 15 s of treatment, obtained from kV fluoroscopy, and for the rest of the fractions the tumor position is only available during the beam-on time from MV imaging. The gating window was set according to the information obtained from the first 15 s such that the residual motion was less than 3 mm. For the fixed gating window technique the gate remained the same for the entire treatment, while for the adaptive technique the range of the tumor motion during beam-on time was measured and used to adapt the gating window to keep the residual motion below 3 mm. The algorithm used to adapt the gating window is described. The residual tumor motion inside the gating window was reduced on average by 24% for the patients with regular breathing patterns and the difference was statistically significant (p-value = 0.01). The magnitude of the residual tumor motion depended on the regularity of the breathing pattern suggesting that image-guided adaptive gating should be combined with breath coaching. The adaptive gating window technique was able to track the exhale position of the breathing cycle quite successfully. Out of a total of 53 fractions the duty cycle was greater than 20% for 42 fractions for the fixed gating window technique and for 39 fractions for the adaptive gating window technique. The results of this study suggest that real-time updating of the gating window can result in reliably low residual tumor motion and therefore can facilitate safe margin reduction.

  12. Multispectral near-IR reflectance imaging of simulated early occlusal lesions: Variation of lesion contrast with lesion depth and severity

    PubMed Central

    Simon, Jacob C.; Chan, Kenneth H.; Darling, Cynthia L.; Fried, Daniel

    2014-01-01

    Background and Objectives Early demineralization appears with high contrast at near-IR wavelengths due to a ten to twenty fold difference in the magnitude of light scattering between sound and demineralized enamel. Water absorption in the near-IR has a significant effect on the lesion contrast and the highest contrast has been measured in spectral regions with higher water absorption. The purpose of this study was to determine how the lesion contrast changes with lesion severity and depth for different spectral regions in the near-IR and compare that range of contrast with visible reflectance and fluorescence. Materials and Methods Forty-four human molars were used in this in vitro study. Teeth were painted with an acid-resistant varnish, leaving a 4×4 mm window on the occlusal surface of each tooth exposed for demineralization. Artificial lesions were produced in the unprotected windows after 12–48 hr exposure to a demineralizing solution at pH-4.5. Near-IR reflectance images were acquired over several near-IR spectral distributions, visible light reflectance, and fluorescence with 405-nm excitation and detection at wavelengths greater than 500-nm. Crossed polarizers were used for reflectance measurements to reduce interference from specular reflectance. Cross polarization optical coherence tomography (CP-OCT) was used to non-destructively assess the depth and severity of demineralization in each sample window. Matching two dimensional CP-OCT images of the lesion depth and integrated reflectivity were compared with the reflectance and fluorescence images to determine how accurately the variation in the lesion contrast represents the variation in the lesion severity. Results Artificial lesions appear more uniform on tooth surfaces exposed to an acid challenge at visible wavelengths than they do in the near-IR. Measurements of the lesion depth and severity using CP-OCT show that the lesion severity varies markedly across the sample windows and that the lesion contrast in the visible does not accurately reflect the large variation in the lesion severity. Reflectance measurements at certain near-IR wavelengths more accurately reflect variation in the depth and severity of the lesions. Conclusion The results of the study suggest that near-IR reflectance measurements at longer wavelengths coincident with higher water absorption are better suited for imaging early caries lesions. PMID:24375543

  13. SU-G-JeP1-15: Sliding Window Prior Data Assisted Compressed Sensing for MRI Lung Tumor Tracking

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Yip, E; Wachowicz, K; Rathee, S

    Purpose: Prior Data Assisted Compressed Sensing (PDACS) is a partial k-space acquisition and reconstruction method for mobile tumour (i.e. lung) tracking using on-line MRI in radiotherapy. PDACS partially relies on prior data acquired at the beginning of dynamic scans, and is therefore susceptible to artifacts in longer duration scan due to slow drifts in MR signal. A novel sliding window strategy is presented to mitigate this effect. Methods: MRI acceleration is simulated by retrospective removal of data from the fully sampled sets. Six lung cancer patients were scanned (clinical 3T MRI) using a balanced steady state free precession (bSSFP) sequencemore » for 3 minutes at approximately 4 frames per second, for a total of 650 dynamics. PDACS acceleration is achieved by undersampling of k-space in a single pseudo-random pattern. Reconstruction iteratively minimizes the total variations while constraining the images to satisfy both the currently acquired data and the prior data in missing k-space. Our novel sliding window technique (SW-PDACS), uses a series of distinct pseudo-random under-sampling patterns of partial k-space – with the prior data drawn from a sliding window of the most recent data available. Under-sampled data, simulating 2 – 5x acceleration are reconstructed using PDACS and SW-PDACS. Three quantitative metrics: artifact power, centroid error and Dice’s coefficient are computed for comparison. Results: Quantitively metric values from all 6 patients are averaged in 3 bins, each containing approximately one minute of dynamic data. For the first minute bin, PDACS and SW-PDACS give comparable results. Progressive decline in image quality metrics in bins 2 and 3 are observed for PDACS. No decline in image quality is observed for SW-PDACS. Conclusion: The novel approach presented (SW-PDACS) is a more robust for accelerating longer duration (>1 minute) dynamic MRI scans for tracking lung tumour motion using on-line MRI in radiotherapy. B.G. Fallone is a co-founder and CEO of MagnetTx Oncology Solutions (under discussions to license Alberta bi-planar linac MR for commercialization).« less

  14. climwin: An R Toolbox for Climate Window Analysis.

    PubMed

    Bailey, Liam D; van de Pol, Martijn

    2016-01-01

    When studying the impacts of climate change, there is a tendency to select climate data from a small set of arbitrary time periods or climate windows (e.g., spring temperature). However, these arbitrary windows may not encompass the strongest periods of climatic sensitivity and may lead to erroneous biological interpretations. Therefore, there is a need to consider a wider range of climate windows to better predict the impacts of future climate change. We introduce the R package climwin that provides a number of methods to test the effect of different climate windows on a chosen response variable and compare these windows to identify potential climate signals. climwin extracts the relevant data for each possible climate window and uses this data to fit a statistical model, the structure of which is chosen by the user. Models are then compared using an information criteria approach. This allows users to determine how well each window explains variation in the response variable and compare model support between windows. climwin also contains methods to detect type I and II errors, which are often a problem with this type of exploratory analysis. This article presents the statistical framework and technical details behind the climwin package and demonstrates the applicability of the method with a number of worked examples.

  15. Linear segmentation algorithm for detecting layer boundary with lidar.

    PubMed

    Mao, Feiyue; Gong, Wei; Logan, Timothy

    2013-11-04

    The automatic detection of aerosol- and cloud-layer boundary (base and top) is important in atmospheric lidar data processing, because the boundary information is not only useful for environment and climate studies, but can also be used as input for further data processing. Previous methods have demonstrated limitations in defining the base and top, window-size setting, and have neglected the in-layer attenuation. To overcome these limitations, we present a new layer detection scheme for up-looking lidars based on linear segmentation with a reasonable threshold setting, boundary selecting, and false positive removing strategies. Preliminary results from both real and simulated data show that this algorithm cannot only detect the layer-base as accurate as the simple multi-scale method, but can also detect the layer-top more accurately than that of the simple multi-scale method. Our algorithm can be directly applied to uncalibrated data without requiring any additional measurements or window size selections.

  16. Timing of favorable conditions, competition and fertility interact to govern recruitment of invasive Chinese tallow tree in stressful environments.

    PubMed

    Gabler, Christopher A; Siemann, Evan

    2013-01-01

    The rate of new exotic recruitment following removal of adult invaders (reinvasion pressure) influences restoration outcomes and costs but is highly variable and poorly understood. We hypothesize that broad variation in average reinvasion pressure of Triadica sebifera (Chinese tallow tree, a major invader) arises from differences among habitats in spatiotemporal availability of realized recruitment windows. These windows are periods of variable duration long enough to permit establishment given local environmental conditions. We tested this hypothesis via a greenhouse mesocosm experiment that quantified how the duration of favorable moisture conditions prior to flood or drought stress (window duration), competition and nutrient availability influenced Triadica success in high stress environments. Window duration influenced pre-stress seedling abundance and size, growth during stress and final abundance; it interacted with other factors to affect final biomass and germination during stress. Stress type and competition impacted final size and biomass, plus germination, mortality and changes in size during stress. Final abundance also depended on competition and the interaction of window duration, stress type and competition. Fertilization interacted with competition and stress to influence biomass and changes in height, respectively, but did not affect Triadica abundance. Overall, longer window durations promoted Triadica establishment, competition and drought (relative to flood) suppressed establishment, and fertilization had weak effects. Interactions among factors frequently produced different effects in specific contexts. Results support our 'outgrow the stress' hypothesis and show that temporal availability of abiotic windows and factors that influence growth rates govern Triadica recruitment in stressful environments. These findings suggest that native seed addition can effectively suppress superior competitors in stressful environments. We also describe environmental scenarios where specific management methods may be more or less effective. Our results enable better niche-based estimates of local reinvasion pressure, which can improve restoration efficacy and efficiency by informing site selection and optimal management.

  17. Timing of Favorable Conditions, Competition and Fertility Interact to Govern Recruitment of Invasive Chinese Tallow Tree in Stressful Environments

    PubMed Central

    Gabler, Christopher A.; Siemann, Evan

    2013-01-01

    The rate of new exotic recruitment following removal of adult invaders (reinvasion pressure) influences restoration outcomes and costs but is highly variable and poorly understood. We hypothesize that broad variation in average reinvasion pressure of Triadica sebifera (Chinese tallow tree, a major invader) arises from differences among habitats in spatiotemporal availability of realized recruitment windows. These windows are periods of variable duration long enough to permit establishment given local environmental conditions. We tested this hypothesis via a greenhouse mesocosm experiment that quantified how the duration of favorable moisture conditions prior to flood or drought stress (window duration), competition and nutrient availability influenced Triadica success in high stress environments. Window duration influenced pre-stress seedling abundance and size, growth during stress and final abundance; it interacted with other factors to affect final biomass and germination during stress. Stress type and competition impacted final size and biomass, plus germination, mortality and changes in size during stress. Final abundance also depended on competition and the interaction of window duration, stress type and competition. Fertilization interacted with competition and stress to influence biomass and changes in height, respectively, but did not affect Triadica abundance. Overall, longer window durations promoted Triadica establishment, competition and drought (relative to flood) suppressed establishment, and fertilization had weak effects. Interactions among factors frequently produced different effects in specific contexts. Results support our ‘outgrow the stress’ hypothesis and show that temporal availability of abiotic windows and factors that influence growth rates govern Triadica recruitment in stressful environments. These findings suggest that native seed addition can effectively suppress superior competitors in stressful environments. We also describe environmental scenarios where specific management methods may be more or less effective. Our results enable better niche-based estimates of local reinvasion pressure, which can improve restoration efficacy and efficiency by informing site selection and optimal management. PMID:23967212

  18. Shrinking windows of opportunity for oak seedling establishment in southern California mountains

    USGS Publications Warehouse

    Davis, Frank W.; Sweet, Lynn C.; Serra-Diaz, Josep M.; Franklin, Janet; McCullough, Ian M.; Flint, Alan L.; Flint, Lorraine E.; Dingman, John; Regan, Helen M.; Syphard, Alexandra D.; Hannah, Lee; Redmond, Kelly; Moritz, Max A.

    2016-01-01

    Seedling establishment is a critical step that may ultimately govern tree species’ distribution shifts under environmental change. Annual variation in the location of seed rain and microclimates results in transient “windows of opportunity” for tree seedling establishment across the landscape. These establishment windows vary at fine spatiotemporal scales that are not considered in most assessments of climate change impacts on tree species range dynamics and habitat displacement. We integrate field seedling establishment trials conducted in the southern Sierra Nevada and western Tehachapi Mountains of southern California with spatially downscaled grids of modeled water-year climatic water deficit (CWDwy) and mean August maximum daily temperature (Tmax) to map historical and projected future microclimates suitable for establishment windows of opportunity for Quercus douglasii, a dominant tree species of warm, dry foothill woodlands, and Q. kelloggii, a dominant of cooler, more mesic montane woodlands and forests. Based on quasi-binomial regression models, Q. douglasii seedling establishment is significantly associated with modeled CWDwy and to a lesser degree with modeled Tmax. Q. kelloggii seedling establishment is most strongly associated with Tmax and best predicted by a two-factor model including CWDwy and Tmax. Establishment niche models are applied to explore recruitment window dynamics in the western Tehachapi Mountains, where these species are currently widespread canopy dominants. Establishment windows are projected to decrease by 50–95%, shrinking locally to higher elevations and north-facing slopes by the end of this century depending on the species and climate scenario. These decreases in establishment windows suggest the potential for longer-term regional population declines of the species. While many additional processes regulate seedling establishment and growth, this study highlights the need to account for topoclimatic controls and interannual climatic variation when assessing how seedling establishment and colonization processes could be affected by climate change.

  19. Targeted Metabolomics Approach To Detect the Misuse of Steroidal Aromatase Inhibitors in Equine Sports by Biomarker Profiling.

    PubMed

    Chan, George Ho Man; Ho, Emmie Ngai Man; Leung, David Kwan Kon; Wong, Kin Sing; Wan, Terence See Ming

    2016-01-05

    The use of anabolic androgenic steroids (AAS) is prohibited in both human and equine sports. The conventional approach in doping control testing for AAS (as well as other prohibited substances) is accomplished by the direct detection of target AAS or their characteristic metabolites in biological samples using hyphenated techniques such as gas chromatography or liquid chromatography coupled with mass spectrometry. Such an approach, however, falls short when dealing with unknown designer steroids where reference materials and their pharmacokinetics are not available. In addition, AASs with fast elimination times render the direct detection approach ineffective as the detection window is short. A targeted metabolomics approach is a plausible alternative to the conventional direct detection approach for controlling the misuse of AAS in sports. Because the administration of AAS of the same class may trigger similar physiological responses or effects in the body, it may be possible to detect such administrations by monitoring changes in the endogenous steroidal expression profile. This study attempts to evaluate the viability of using the targeted metabolomics approach to detect the administration of steroidal aromatase inhibitors, namely androst-4-ene-3,6,17-trione (6-OXO) and androsta-1,4,6-triene-3,17-dione (ATD), in horses. Total (free and conjugated) urinary concentrations of 31 endogenous steroids were determined by gas chromatography-tandem mass spectrometry for a group of 2 resting and 2 in-training thoroughbred geldings treated with either 6-OXO or ATD. Similar data were also obtained from a control (untreated) group of in-training thoroughbred geldings (n = 28). Statistical processing and chemometric procedures using principle component analysis and orthogonal projection to latent structures-discriminant analysis (OPLS-DA) have highlighted 7 potential biomarkers that could be used to differentiate urine samples obtained from the control and the treated groups. On the basis of this targeted metabolomic approach, the administration of 6-OXO and ATD could be detected for much longer relative to that of the conventional direct detection approach.

  20. Doping control analysis of 121 prohibited substances in equine hair by liquid chromatography-tandem mass spectrometry.

    PubMed

    Wong, J K Y; Choi, T L S; Kwok, K Y; Lei, E N Y; Wan, T S M

    2018-06-01

    Equine hair is becoming an increasingly popular biological matrix for doping control of horse sports; one of the reasons for this is the significantly longer detection window hair can offer. Hair analysis opens up the opportunity for longitudinal monitoring of drug exposure which would otherwise not be possible with the more traditional and common biological matrices, such as urine and blood. As such, there is a need for more multi-target screening methods covering a broad range of prohibited substances in equine hair at the required sensitivities for equine doping control. This paper describes a sensitive ultra-high performance liquid chromatography - tandem mass spectrometry (UHPLC-MS/MS) method for the detection of 121 drugs and/or their metabolites in equine hair covering ten classes of prohibited substances with estimated limits of detection between 0.1 and 10 pg/mg. To our knowledge, this is the first report of a screening method in equine hair which can cover such a broad range and well over one hundred prohibited substances in a single analytical run. This method has been validated for its specificity, precision and extraction recovery. Applicability of this method has been demonstrated by: (i) the successful identification of clenbuterol, 2-(1-hydroxyethyl) promazine sulfoxide, acepromazine and tetrahydrozoline in genuine equine mane samples; as well as (ii) the detection of drugs from artificially incurred mane hair samples which have been prepared by soaking blank hair samples in solutions of drug targets. Copyright © 2018 Elsevier B.V. All rights reserved.

  1. Concorde noise-induced building vibrations: John F. Kennedy International Airport

    NASA Technical Reports Server (NTRS)

    Mayes, W. H.; Stephens, D. G.; Deloach, R.; Cawthorn, J. M.; Holmes, H. K.; Lewis, R. B.; Holliday, B. G.; Ward, D. W.; Miller, W. T.

    1978-01-01

    Outdoor and indoor noise levels resulting from aircraft flyovers and certain nonaircraft events were recorded at eight homesites and a school along with the associated vibration levels in the walls, windows, and floors at these test sites. Limited subjective tests were conducted to examine the human detection and annoyance thresholds for building vibration and rattle caused by aircraft noise. Both vibration and rattle were detected subjectively in several houses for some operations of both the Concorde and subsonic aircraft. Seated subjects more readily detected floor vibrations than wall or window vibrations. Aircraft noise generally caused more window vibrations than common nonaircraft events such as walking and closing doors. Nonaircraft events and aircraft flyovers resulted in comparable wall vibration levels, while floor vibrations were generally greater for nonaircraft events than for aircraft flyovers. The relationship between structural vibration and aircraft noise is linear, with vibration levels being accurately predicted from overall sound pressure levels (OASPL) measured near the structure. Relatively high levels of structural vibration measured during Concorde operations are due more to higher OASPL levels than to unique Concorde-source characteristics.

  2. The Impact of Changing Cloud Cover on the High Arctic's Primary Cooling-to-space Windows

    NASA Astrophysics Data System (ADS)

    Mariani, Zen; Rowe, Penny; Strong, Kimberly; Walden, Von; Drummond, James

    2014-05-01

    In the Arctic, most of the infrared energy emitted by the surface escapes to space in two atmospheric windows at 10 and 20 μm. As the Arctic warms, the 20 μm cooling-to-space window becomes increasingly opaque (or "closed"), trapping more surface infrared radiation in the atmosphere, with implications for the Arctic's radiative energy balance. Since 2006, the Canadian Network for the Detection of Atmospheric Change (CANDAC) has measured downwelling infrared radiance with an Atmospheric Emitted Radiance Interferometer (AERI) at the Polar Environment Atmospheric Research Laboratory (PEARL) at Eureka, Canada, providing the first long-term measurements of the 10 and 20 μm windows in the high Arctic. In this work, measurements of the distribution of downwelling 10 and 20 µm brightness temperatures at Eureka are separated based on cloud cover, providing a comparison to an existing climatology from the Southern Great Plains (SGP). Measurements of the downwelling radiance at both 10 and 20 μm exhibit strong seasonal variability as a result of changes in temperature and water vapour, in addition to variability with cloud cover. When separated by season, brightness temperatures in the 20 µm window are found to be independent of cloud thickness in the summertime, indicating that this window is closed in the summer. Radiance trends in three-month averages are positive and are significantly larger (factor > 5) than the trends detected at the SGP, indicating that changes in the downwelling radiance are accelerated in the high Arctic compared to lower latitudes. This statistically significant increase (> 5% / yr) in radiance at 10 μm occurs only when the 20 μm window is mostly transparent, or "open" (i.e., in all seasons except summer), and may have long-term consequences, particularly as warmer temperatures and increased water vapour "close" the dirty window for a prolonged period. These surface-based measurements of radiative forcing can be used to quantify changes in the high-Arctic energy budget and evaluate general circulation model simulations.

  3. 78 FR 70892 - Airworthiness Directives; ATR-GIE Avions de Transport Régional Airplanes

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-11-27

    .../water leak, which is an indication that structural components within the window have begun to... detect and correct air/water leakage of the cockpit forward side window, which could lead to rapid cabin... are considered as precursors of this kind of failure. Air or water leakages between the z-bar and the...

  4. Enticing arsonists with broken windows and social disorder

    Treesearch

    Douglas S. Thomas; David T. Butry; Jeffrey P. Prestemon

    2011-01-01

    In criminology, it is well understood that indicators of urban decay, such as abandoned buildings littered with broken windows, provide criminals with signals identifying neighborhoods with lower crime detection and apprehension rates than better maintained neighborhoods. Whether it is the resident population’s sense of apathy, lack of civic pride, or fear of...

  5. A windowing and mapping strategy for gear tooth fault detection of a planetary gearbox

    NASA Astrophysics Data System (ADS)

    Liang, Xihui; Zuo, Ming J.; Liu, Libin

    2016-12-01

    When there is a single cracked tooth in a planet gear, the cracked tooth is enmeshed for very short time duration in comparison to the total time of a full revolution of the planet gear. The fault symptom generated by the single cracked tooth may be very weak. This study aims to develop a windowing and mapping strategy to interpret the vibration signal of a planetary gear at the tooth level. The fault symptoms generated by a single cracked tooth of the planet gear of interest can be extracted. The health condition of the planet gear can be assessed by comparing the differences among the signals of all teeth of the planet gear. The proposed windowing and mapping strategy is tested with both simulated vibration signals and experimental vibration signals. The tooth signals can be successfully decomposed and a single tooth fault on a planet gear can be effectively detected.

  6. A sensitive assay for urinary cocaine metabolite benzoylecgonine shows more positive results and longer half‐lives than those using traditional cut‐offs

    PubMed Central

    Nickley, Joyce; Krock, Kevin

    2017-01-01

    Cocaine is a common drug of abuse. To detect its use, a screening detection concentration for the cocaine metabolite benzoylecgonine is commonly set at 150 ng/mL and its confirmatory cut‐off is set at 100 ng/mL. Studies have suggested that these cut‐offs may be set too high, allowing some patients with this substance abuse problem to be missed or improperly monitored. With the advent of liquid chromatography–tandem mass spectrometry (LC–MS/MS) technology it is possible to reliably detect and quantify lower concentrations of its metabolite benzoylecgonine as part of a larger drug panel. One purpose of the study was to establish if there was a significant increase in detection of cocaine use with a ten‐fold more sensitive cut‐off. A very sensitive dilute and shoot assay for benzoylecgonine was developed with a lower limit of quantitation of 5 ng/mL. Validation of the 5 ng/mL cut‐off was achieved by plotting all the positive cocaine observations as a frequency distribution on a logarithmic scale. The number of positive results with measurable concentrations below the typical industry 100 ng/mL cut‐off level but above the high sensitivity 5 ng/mL cut‐off level was observed to be 51.9% of the observed positives. The lower cut‐off also allowed a re‐evaluation of the window of detection after cessation of use. It was observed to be between 17 and 22 days. © 2016 Precision Diagnostics, LLC. Drug Testing and Analysis published by John Wiley & Sons, Ltd. PMID:28024167

  7. A sensitive assay for urinary cocaine metabolite benzoylecgonine shows more positive results and longer half-lives than those using traditional cut-offs.

    PubMed

    Nickley, Joyce; Pesce, Amadeo J; Krock, Kevin

    2017-08-01

    Cocaine is a common drug of abuse. To detect its use, a screening detection concentration for the cocaine metabolite benzoylecgonine is commonly set at 150 ng/mL and its confirmatory cut-off is set at 100 ng/mL. Studies have suggested that these cut-offs may be set too high, allowing some patients with this substance abuse problem to be missed or improperly monitored. With the advent of liquid chromatography-tandem mass spectrometry (LC-MS/MS) technology it is possible to reliably detect and quantify lower concentrations of its metabolite benzoylecgonine as part of a larger drug panel. One purpose of the study was to establish if there was a significant increase in detection of cocaine use with a ten-fold more sensitive cut-off. A very sensitive dilute and shoot assay for benzoylecgonine was developed with a lower limit of quantitation of 5 ng/mL. Validation of the 5 ng/mL cut-off was achieved by plotting all the positive cocaine observations as a frequency distribution on a logarithmic scale. The number of positive results with measurable concentrations below the typical industry 100 ng/mL cut-off level but above the high sensitivity 5 ng/mL cut-off level was observed to be 51.9% of the observed positives. The lower cut-off also allowed a re-evaluation of the window of detection after cessation of use. It was observed to be between 17 and 22 days. © 2016 Precision Diagnostics, LLC. Drug Testing and Analysis published by John Wiley & Sons, Ltd. © 2016 Precision Diagnostics, LLC. Drug Testing and Analysis published by John Wiley & Sons, Ltd.

  8. The second window ICG technique demonstrates a broad plateau period for near infrared fluorescence tumor contrast in glioblastoma

    PubMed Central

    Sheikh, Saad; Xia, Leilei; Pierce, John; Newton, Andrew; Predina, Jarrod; Cho, Steve; Nasrallah, MacLean; Singhal, Sunil; Dorsey, Jay; Lee, John Y. K.

    2017-01-01

    Introduction Fluorescence-guided surgery has emerged as a powerful tool to detect, localize and resect tumors in the operative setting. Our laboratory has pioneered a novel way to administer an FDA-approved near-infrared (NIR) contrast agent to help surgeons with this task. This technique, coined Second Window ICG, exploits the natural permeability of tumor vasculature and its poor clearance to deliver high doses of indocyanine green (ICG) to tumors. This technique differs substantially from established ICG video angiography techniques that visualize ICG within minutes of injection. We hypothesized that Second Window ICG can provide NIR optical contrast with good signal characteristics in intracranial brain tumors over a longer period of time than previously appreciated with ICG video angiography alone. We tested this hypothesis in an intracranial mouse glioblastoma model, and corroborated this in a human clinical trial. Methods Intracranial tumors were established in 20 mice using the U251-Luc-GFP cell line. Successful grafts were confirmed with bioluminescence. Intravenous tail vein injections of 5.0 mg/kg (high dose) or 2.5 mg/kg (low dose) ICG were performed. The Perkin Elmer IVIS Spectrum (closed field) was used to visualize NIR fluorescence signal at seven delayed time points following ICG injection. NIR signals were quantified using LivingImage software. Based on the success of our results, human subjects were recruited to a clinical trial and intravenously injected with high dose 5.0 mg/kg. Imaging was performed with the VisionSense Iridium (open field) during surgery one day after ICG injection. Results In the murine model, the NIR signal-to-background ratio (SBR) in gliomas peaks at one hour after infusion, then plateaus and remains strong and stable for at least 48 hours. Higher dose 5.0 mg/kg improves NIR signal as compared to lower dose at 2.5 mg/kg (SBR = 3.5 vs. 2.8; P = 0.0624). Although early (≤ 6 hrs) visualization of the Second Window ICG accumulation in gliomas is stronger than late (≥24 hrs) visualization (SBR = 3.94 vs. 2.32; p<0.05) there appears to be a long plateau period of stable ICG NIR signal accumulation within tumors in the murine model. We call this long plateau period the “Second Window” of ICG. In glioblastoma patients, the delayed visualization of intratumoral NIR signal was strong (SBR 7.50 ± 0.74), without any significant difference within the 19 to 30 hour visualization window (R2 = 0.019). Conclusion The Second Window ICG technique allows neurosurgeons to deliver NIR optical contrast agent to human glioblastoma patients, thus providing real-time tumor identification in the operating room. This nonspecific tumor accumulation of ICG within the tumor provides strong signal to background contrast, and is not significantly time dependent between 6 hours to 48 hours, providing a broad plateau for stable visualization. This finding suggests that optimal imaging of the “Second Window of ICG” may be within this plateau period, thus providing signal uniformity across subjects. PMID:28738091

  9. Measurement of Temporal Awareness in Air Traffic Control

    NASA Technical Reports Server (NTRS)

    Rantanen, E.M.

    2009-01-01

    Temporal awareness, or level 3 situation awareness, is critical to successful control of air traffic, yet the construct remains ill-defined and difficult to measure. This research sought evidence for air traffic controllers awareness of temporal characteristics of their tasks in data from a high-fidelity system evaluation simulation. Five teams of controllers worked on four scenarios with different traffic load. Several temporal parameters were defined for each task controllers performed during a simulation run and their actions on the tasks were timed relative to them. Controllers showed a strong tendency to prioritize tasks according to a first come, first served principle. This trend persisted as task load increased. Also evident was awareness of the urgency of tasks, as tasks with impending closing of a window of opportunity were performed before tasks that had longer time available before closing of the window.

  10. A de-noising algorithm based on wavelet threshold-exponential adaptive window width-fitting for ground electrical source airborne transient electromagnetic signal

    NASA Astrophysics Data System (ADS)

    Ji, Yanju; Li, Dongsheng; Yu, Mingmei; Wang, Yuan; Wu, Qiong; Lin, Jun

    2016-05-01

    The ground electrical source airborne transient electromagnetic system (GREATEM) on an unmanned aircraft enjoys considerable prospecting depth, lateral resolution and detection efficiency, etc. In recent years it has become an important technical means of rapid resources exploration. However, GREATEM data are extremely vulnerable to stationary white noise and non-stationary electromagnetic noise (sferics noise, aircraft engine noise and other human electromagnetic noises). These noises will cause degradation of the imaging quality for data interpretation. Based on the characteristics of the GREATEM data and major noises, we propose a de-noising algorithm utilizing wavelet threshold method and exponential adaptive window width-fitting. Firstly, the white noise is filtered in the measured data using the wavelet threshold method. Then, the data are segmented using data window whose step length is even logarithmic intervals. The data polluted by electromagnetic noise are identified within each window based on the discriminating principle of energy detection, and the attenuation characteristics of the data slope are extracted. Eventually, an exponential fitting algorithm is adopted to fit the attenuation curve of each window, and the data polluted by non-stationary electromagnetic noise are replaced with their fitting results. Thus the non-stationary electromagnetic noise can be effectively removed. The proposed algorithm is verified by the synthetic and real GREATEM signals. The results show that in GREATEM signal, stationary white noise and non-stationary electromagnetic noise can be effectively filtered using the wavelet threshold-exponential adaptive window width-fitting algorithm, which enhances the imaging quality.

  11. Asay window: A new spall diagnostic

    NASA Astrophysics Data System (ADS)

    McCluskey, Craig W.; Wilke, Mark D.; Anderson, William W.; Byers, Mark E.; Holtkamp, David B.; Rigg, Paulo A.; Furnish, Michael D.; Romero, Vincent T.

    2006-11-01

    By changing from the metallic foil of the Asay foil diagnostic, which can detect ejecta from a shocked surface, to a lithium fluoride (LiF) or polymethyl methacrylate (PMMA) window, it is possible to detect multiple spall layers and interlayer rubble. Past experiments to demonstrate this diagnostic have used high explosives (HEs) to shock metals to produce multiple spall layers. Because the exact characteristics of HE-induced spall layers cannot be predetermined, two issues exist in the quantitative interpretation of the data. First, to what level of fidelity is the Asay window method capable of providing quantitative information about spall layers, possibly separated by rubble, and second, contingent on the first, can an analytic technique be developed to convert the data to a meaningful description of spall from a given experiment? In this article, we address the first issue. A layered projectile fired from a gas gun was used to test the new diagnostic's accuracy and repeatability. We impacted a LiF or PMMA window viewed by a velocity interferometer system for any reflector (VISAR) probe with a projectile consisting of four thin stainless steel disks spaced apart 200μm with either vacuum or polyethylene. The window/surface interface velocity measured with a VISAR probe was compared with calculations. The good agreement observed between the adjusted calculation and the measured data indicates that, in principle and given enough prior information, it is possible to use the Asay window data to model a density distribution from spalled material with simple hydrodynamic models and only simple adjustments to nominal predictions.

  12. 17. The south wall of the dining room has an ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    17. The south wall of the dining room has an original wood wainscot similar to the one present on the north wall. However, in lieu of windows it appears to have been constructed with mirrors, which are no longer in place. The electrical boxes are nonoriginal elements. Simulated panel bevels are readily apparent in this view. Credit GADA/MRM. - Stroud Building, 31-33 North Central Avenue, Phoenix, Maricopa County, AZ

  13. Improved Statistical Fault Detection Technique and Application to Biological Phenomena Modeled by S-Systems.

    PubMed

    Mansouri, Majdi; Nounou, Mohamed N; Nounou, Hazem N

    2017-09-01

    In our previous work, we have demonstrated the effectiveness of the linear multiscale principal component analysis (PCA)-based moving window (MW)-generalized likelihood ratio test (GLRT) technique over the classical PCA and multiscale principal component analysis (MSPCA)-based GLRT methods. The developed fault detection algorithm provided optimal properties by maximizing the detection probability for a particular false alarm rate (FAR) with different values of windows, and however, most real systems are nonlinear, which make the linear PCA method not able to tackle the issue of non-linearity to a great extent. Thus, in this paper, first, we apply a nonlinear PCA to obtain an accurate principal component of a set of data and handle a wide range of nonlinearities using the kernel principal component analysis (KPCA) model. The KPCA is among the most popular nonlinear statistical methods. Second, we extend the MW-GLRT technique to one that utilizes exponential weights to residuals in the moving window (instead of equal weightage) as it might be able to further improve fault detection performance by reducing the FAR using exponentially weighed moving average (EWMA). The developed detection method, which is called EWMA-GLRT, provides improved properties, such as smaller missed detection and FARs and smaller average run length. The idea behind the developed EWMA-GLRT is to compute a new GLRT statistic that integrates current and previous data information in a decreasing exponential fashion giving more weight to the more recent data. This provides a more accurate estimation of the GLRT statistic and provides a stronger memory that will enable better decision making with respect to fault detection. Therefore, in this paper, a KPCA-based EWMA-GLRT method is developed and utilized in practice to improve fault detection in biological phenomena modeled by S-systems and to enhance monitoring process mean. The idea behind a KPCA-based EWMA-GLRT fault detection algorithm is to combine the advantages brought forward by the proposed EWMA-GLRT fault detection chart with the KPCA model. Thus, it is used to enhance fault detection of the Cad System in E. coli model through monitoring some of the key variables involved in this model such as enzymes, transport proteins, regulatory proteins, lysine, and cadaverine. The results demonstrate the effectiveness of the proposed KPCA-based EWMA-GLRT method over Q , GLRT, EWMA, Shewhart, and moving window-GLRT methods. The detection performance is assessed and evaluated in terms of FAR, missed detection rates, and average run length (ARL 1 ) values.

  14. Computed Tomography Window Blending: Feasibility in Thoracic Trauma.

    PubMed

    Mandell, Jacob C; Wortman, Jeremy R; Rocha, Tatiana C; Folio, Les R; Andriole, Katherine P; Khurana, Bharti

    2018-02-07

    This study aims to demonstrate the feasibility of processing computed tomography (CT) images with a custom window blending algorithm that combines soft-tissue, bone, and lung window settings into a single image; to compare the time for interpretation of chest CT for thoracic trauma with window blending and conventional window settings; and to assess diagnostic performance of both techniques. Adobe Photoshop was scripted to process axial DICOM images from retrospective contrast-enhanced chest CTs performed for trauma with a window-blending algorithm. Two emergency radiologists independently interpreted the axial images from 103 chest CTs with both blended and conventional windows. Interpretation time and diagnostic performance were compared with Wilcoxon signed-rank test and McNemar test, respectively. Agreement with Nexus CT Chest injury severity was assessed with the weighted kappa statistic. A total of 13,295 images were processed without error. Interpretation was faster with window blending, resulting in a 20.3% time saving (P < .001), with no difference in diagnostic performance, within the power of the study to detect a difference in sensitivity of 5% as determined by post hoc power analysis. The sensitivity of the window-blended cases was 82.7%, compared to 81.6% for conventional windows. The specificity of the window-blended cases was 93.1%, compared to 90.5% for conventional windows. All injuries of major clinical significance (per Nexus CT Chest criteria) were correctly identified in all reading sessions, and all negative cases were correctly classified. All readers demonstrated near-perfect agreement with injury severity classification with both window settings. In this pilot study utilizing retrospective data, window blending allows faster preliminary interpretation of axial chest CT performed for trauma, with no significant difference in diagnostic performance compared to conventional window settings. Future studies would be required to assess the utility of window blending in clinical practice. Copyright © 2018 The Association of University Radiologists. All rights reserved.

  15. Accounting for nonmonotonic precursor duration effects with gain reduction in the temporal window model.

    PubMed

    Roverud, Elin; Strickland, Elizabeth A

    2014-03-01

    The mechanisms of forward masking are not clearly understood. The temporal window model (TWM) proposes that masking occurs via a neural mechanism that integrates within a temporal window. The medial olivocochlear reflex (MOCR), a sound-evoked reflex that reduces cochlear amplifier gain, may also contribute to forward masking if the preceding sound reduces gain for the signal. Psychophysical evidence of gain reduction can be observed using a growth of masking (GOM) paradigm with an off-frequency forward masker and a precursor. The basilar membrane input/output (I/O) function is estimated from the GOM function, and the I/O function gain is reduced by the precursor. In this study, the effect of precursor duration on this gain reduction effect was examined for on- and off-frequency precursors. With on-frequency precursors, thresholds increased with increasing precursor duration, then decreased (rolled over) for longer durations. Thresholds with off-frequency precursors continued to increase with increasing precursor duration. These results are not consistent with solely neural masking, but may reflect gain reduction that selectively affects on-frequency stimuli. The TWM was modified to include history-dependent gain reduction to simulate the MOCR, called the temporal window model-gain reduction (TWM-GR). The TWM-GR predicted rollover and the differences with on- and off-frequency precursors whereas the TWM did not.

  16. Stimulation research on the measurement of the IRW pneumatic thermal radiation

    NASA Astrophysics Data System (ADS)

    Wei, Yifang; Liu, Xiaohua; Liu, Ming; Dong, Liquan; Zhao, Yuejin

    2018-01-01

    When an aircraft flies at a hypersonic speed within the atmosphere, the temperature of the infrared window (IRW) on the aircraft will rise rapidly due to the high-speed incoming flow will produce a severe aerodynamic heating to its optical detection window. The infrared (IR) radiation of the high-temperature gas and optical window will generate severe pneumatic thermal radiation effect upon the detection system, with the performance of the IR detector possibly being reduced or even destroyed. To evaluate the influence on the target imaging made by the IRW radiation, the experiment on the basis of building a simulating model is conducted by the means of ray tracing so that the accurate transmittance of the IRW can be observed under the different temperature. And then the radiation distribution of the thermal radiation on the detector generated by the IRW radiation noise and target signal can finally be obtained. This paper also records the different parameters in the detection system being set in the experiment, and analyzes the different influences brought by various factors to the Signal to Noise Ratio (SNR). It is also expected that it will provide a data reference to the following research of radiation noise suppression and design of IR detection system.

  17. Adaptive thresholding and dynamic windowing method for automatic centroid detection of digital Shack-Hartmann wavefront sensor.

    PubMed

    Yin, Xiaoming; Li, Xiang; Zhao, Liping; Fang, Zhongping

    2009-11-10

    A Shack-Hartmann wavefront sensor (SWHS) splits the incident wavefront into many subsections and transfers the distorted wavefront detection into the centroid measurement. The accuracy of the centroid measurement determines the accuracy of the SWHS. Many methods have been presented to improve the accuracy of the wavefront centroid measurement. However, most of these methods are discussed from the point of view of optics, based on the assumption that the spot intensity of the SHWS has a Gaussian distribution, which is not applicable to the digital SHWS. In this paper, we present a centroid measurement algorithm based on the adaptive thresholding and dynamic windowing method by utilizing image processing techniques for practical application of the digital SHWS in surface profile measurement. The method can detect the centroid of each focal spot precisely and robustly by eliminating the influence of various noises, such as diffraction of the digital SHWS, unevenness and instability of the light source, as well as deviation between the centroid of the focal spot and the center of the detection area. The experimental results demonstrate that the algorithm has better precision, repeatability, and stability compared with other commonly used centroid methods, such as the statistical averaging, thresholding, and windowing algorithms.

  18. Detection of glass particles on bone lesions using SEM-EDS.

    PubMed

    Montoriol, Romain; Guilbeau-Frugier, Céline; Chantalat, Elodie; Roumiguié, Mathieu; Delisle, Marie-Bernadette; Payré, Bruno; Telmon, Norbert; Savall, Frédéric

    2017-09-01

    The problem of identifying the wounding agent in forensic cases is recurrent. Moreover, when several tools are involved, distinguishing the origin of lesions can be difficult. Scanning electron microscopy (SEM)/energy dispersive X-ray analysis (EDS) equipment is increasingly available to the scientific and medical community, and some studies have reported its use in forensic anthropology. However, at our knowledge, no study has reported the use of SEM-EDS in forensic cases involving glass tools, whether in case reports or experiments. We performed an experimental study on human rib fragments, on which we manually created wounds using fragments of window and mirror glass. SEM-EDS was executed on samples without any further preparation on low vacuum mode, then on the same samples after defleshing them completely by boiling them. Window and mirror glass particles were detected on experimental wounds. Both had silica in their spectra, and the opaque side of the mirror contained titanium, allowing for their identification. Boiling and defleshing the bone samples involved a loss of information in terms of the number of wounds detected as positive for glass particles and in the number of glass particles detected, for both window and mirror glass. We suggest the analysis of wounds with suspected glass particles using low vacuum mode and with no defleshment by boiling.

  19. Structural Information Detection Based Filter for GF-3 SAR Images

    NASA Astrophysics Data System (ADS)

    Sun, Z.; Song, Y.

    2018-04-01

    GF-3 satellite with high resolution, large swath, multi-imaging mode, long service life and other characteristics, can achieve allweather and all day monitoring for global land and ocean. It has become the highest resolution satellite system in the world with the C-band multi-polarized synthetic aperture radar (SAR) satellite. However, due to the coherent imaging system, speckle appears in GF-3 SAR images, and it hinders the understanding and interpretation of images seriously. Therefore, the processing of SAR images has big challenges owing to the appearance of speckle. The high-resolution SAR images produced by the GF-3 satellite are rich in information and have obvious feature structures such as points, edges, lines and so on. The traditional filters such as Lee filter and Gamma MAP filter are not appropriate for the GF-3 SAR images since they ignore the structural information of images. In this paper, the structural information detection based filter is constructed, successively including the point target detection in the smallest window, the adaptive windowing method based on regional characteristics, and the most homogeneous sub-window selection. The despeckling experiments on GF-3 SAR images demonstrate that compared with the traditional filters, the proposed structural information detection based filter can well preserve the points, edges and lines as well as smooth the speckle more sufficiently.

  20. Hard x-ray focusing optics for concealed object detection

    NASA Astrophysics Data System (ADS)

    Jannson, Tomasz; Gertsenshteyn, Michael

    2006-05-01

    In this paper, we discuss hard x-ray optics, in general, and lobster-eye focusing optics, in particular, for concealed object detection, at longer distances. The longer distance (~50m) scenario is important for Improvised Explosives Detection (IED), "seeing through walls," "seeing objects under ground," and related applications.

  1. Design Study of an X-ray Crystal Spectrometer for the HANBIT Mirror Machine

    NASA Astrophysics Data System (ADS)

    Lee, S. G.; Hwang, S. M.; Bitter, M. L.

    1997-11-01

    X-ray crystal spectroscopy is expected to play a major role for the diagnostics of the reactor-like plasmas produced in future large tokamaks, such as KSTAR and ITER. However, it is also desirable to extend the observable spectral range to longer wavelengths (7-15 dotA), which is of interest for the diagnostics of plasmas with much lower electron densities (10^11-10^12 cm-3) and electron temperatures (100 - 200 eV) in other magnetic-confinement experiments, such as the HANBIT mirror machine. The construction of crystal spectrometers for this wavelength range and these plasma conditions is challenging because of the low X-ray emissivity and the fact that the low-energy X-rays are strongly attenuated by even very thin foils or windows. New types of detectors other than the presently used multi-wire proportional counters are therefore needed to obtain a high detection efficiency. In this paper, we present a design study for a vacuum spectrometer with a CCD array detector and detailed estimates of the instrument performance for the observation of spectra from O, Ne and Al ions.

  2. Windowed Multitaper Correlation Analysis of Multimodal Brain Monitoring Parameters

    PubMed Central

    Proescholdt, Martin A.; Bele, Sylvia; Brawanski, Alexander

    2015-01-01

    Although multimodal monitoring sets the standard in daily practice of neurocritical care, problem-oriented analysis tools to interpret the huge amount of data are lacking. Recently a mathematical model was presented that simulates the cerebral perfusion and oxygen supply in case of a severe head trauma, predicting the appearance of distinct correlations between arterial blood pressure and intracranial pressure. In this study we present a set of mathematical tools that reliably detect the predicted correlations in data recorded at a neurocritical care unit. The time resolved correlations will be identified by a windowing technique combined with Fourier-based coherence calculations. The phasing of the data is detected by means of Hilbert phase difference within the above mentioned windows. A statistical testing method is introduced that allows tuning the parameters of the windowing method in such a way that a predefined accuracy is reached. With this method the data of fifteen patients were examined in which we found the predicted correlation in each patient. Additionally it could be shown that the occurrence of a distinct correlation parameter, called scp, represents a predictive value of high quality for the patients outcome. PMID:25821507

  3. Deep tissue imaging of microfracture and non-displaced fracture of bone using the second and third near-infrared therapeutic windows

    NASA Astrophysics Data System (ADS)

    Sordillo, Laura A.; Pu, Yang; Sordillo, P. P.; Budansky, Yury; Alfano, Robert R.

    2014-03-01

    Near-infrared (NIR) light in the wavelengths of 700 nm to 2,000 nm has three NIR optical, or therapeutic, windows, which allow for deeper depth penetration in scattering tissue media. Microfractures secondary to repetitive stress, particularly in the lower extremities, are an important problem for military recruits and athletes. They also frequently occur in the elderly, or in patients taking bisphosphonates or denosumab. Microfractures can be early predictors of a major bone fracture. Using the second and third NIR therapeutic windows, we investigated the results from images of chicken bone and human tibial bone with microfractures and non-displaced fractures with and without overlying tissues of various thicknesses. Images of bone with microfractures and non-displaced fractures with tissue show scattering photons in the third NIR window with wavelengths between 1,650 nm and 1,870 nm are diminished and absorption is increased slightly from and second NIR windows. Results from images of fractured bones show the attenuation length of light through tissue in the third optical window to be larger than in the second therapeutic window. Use of these windows may aid in the detection of bone microfractures, and thus reduce the incidence of major bone fracture in susceptible groups.

  4. Technical Note: Display window setting: An important factor for detecting subtle but clinically relevant artifacts in daily CT quality control.

    PubMed

    Long, Zaiyang; Bruesewitz, Michael R; Sheedy, Emily N; Powell, Michele A; Kramer, Jacqualynn C; Supalla, Randall R; Colvin, Chance M; Bechel, Jessica R; Favazza, Christopher P; Kofler, James M; Leng, Shuai; McCollough, Cynthia H; Yu, Lifeng

    2016-12-01

    This study aimed to investigate the influence of display window setting on technologist performance detecting subtle but clinically relevant artifacts in daily computed tomography (CT) quality control (dQC) images. Fifty three sets of dQC images were retrospectively selected, including 30 sets without artifacts, and 23 with subtle but clinically relevant artifacts. They were randomized and shown to six CT technologists (two new and four experienced). Each technologist reviewed all images in each of two sessions, one with a display window width (WW) of 100 HU, which is currently recommended by the American College of Radiology, and the other with a narrow WW of 40 HU, both at a window level of 0 HU. For each case, technologists rated the presence of image artifacts based on a five point scale. The area under the receiver operating characteristic curve (AUC) was used to evaluate the artifact detection performance. At a WW of 100 HU, the AUC (95% confidence interval) was 0.658 (0.576, 0.740), 0.532 (0.429, 0.635), and 0.616 (0.543, 0.619) for the experienced, new, and all technologists, respectively. At a WW of 40 HU, the AUC was 0.768 (0.687, 0.850), 0.546 (0.433, 0.658), and 0.694 (0.619, 0.769), respectively. The performance significantly improved at WW of 40 HU for experienced technologists (p = 0.009) and for all technologists (p = 0.040). Use of a narrow display WW significantly improved technologists' performance in dQC for detecting subtle but clinically relevant artifacts as compared to that using a 100 HU display WW.

  5. A sealed titanium window proportional counter for the detection of .5-keV X rays.

    NASA Technical Reports Server (NTRS)

    Mcclintock, J. E.; Levine, A.; Rappaport, S.

    1972-01-01

    A sealed Ti window proportional counter sensitive to X radiation in the energy range 0.35-0.45 keV and above 1.5 keV is described. Measurements of the Ti mass absorption coefficients and a graphical summary of the literature values are presented. For a proportional counter with a 930 microgram/sq cm (2.1-micron) Ti window, the peak efficiency at 0.45 keV is found to lie between 4.6% and 7.1%. An application in X-ray astronomy involving a rocket observation of Sco X-1 is discussed.

  6. Improving the phase measurement by the apodization filter in the digital holography

    NASA Astrophysics Data System (ADS)

    Chang, Shifeng; Wang, Dayong; Wang, Yunxin; Zhao, Jie; Rong, Lu

    2012-11-01

    Due to the finite size of the hologram aperture in digital holography, high frequency intensity and phase fluctuations along the edges of the images, which reduce the precision of phase measurement. In this paper, the apodization filters are applied to improve the phase measurement in the digital holography. Firstly, the experimental setup of the lensless Fourier transform digital holography is built, where the sample is a standard phase grating with the grating constant of 300μm and the depth of 150nm. Then, apodization filters are applied to phase measurement of the sample with three kinds of the window functions: Tukey window, Hanning window and Blackman window, respectively. Finally, the results were compared to the detection data given by the commercial white-light interferometer. It is shown that aperture diffraction effects can be reduced by the digital apodization, and the phase measurement with the apodization is more accurate than in the unapodized case. Meanwhile, the Blackman window function produces better effect than the other two window functions in the measurement of the standard phase grating.

  7. Fast object detection algorithm based on HOG and CNN

    NASA Astrophysics Data System (ADS)

    Lu, Tongwei; Wang, Dandan; Zhang, Yanduo

    2018-04-01

    In the field of computer vision, object classification and object detection are widely used in many fields. The traditional object detection have two main problems:one is that sliding window of the regional selection strategy is high time complexity and have window redundancy. And the other one is that Robustness of the feature is not well. In order to solve those problems, Regional Proposal Network (RPN) is used to select candidate regions instead of selective search algorithm. Compared with traditional algorithms and selective search algorithms, RPN has higher efficiency and accuracy. We combine HOG feature and convolution neural network (CNN) to extract features. And we use SVM to classify. For TorontoNet, our algorithm's mAP is 1.6 percentage points higher. For OxfordNet, our algorithm's mAP is 1.3 percentage higher.

  8. The ability of endotoxin adsorption during a longer duration of direct hemoperfusion with a polymyxin B-immobilized fiber column in patients with septic shock.

    PubMed

    Shimizu, Tomoharu; Obata, Toru; Sonoda, Hiromichi; Akabori, Hiroya; Tabata, Takahisa; Eguchi, Yutaka; Endo, Yoshihiro; Tani, Tohru

    2013-12-01

    The patients' hemodynamic conditions of septic shock due to intra-abdominal infection were improved by the longer duration of direct hemoperfusion with a polymyxin B-immobilized fiber column (PMX), reducing plasma endotoxins measured by the novel endotoxin detection method, named endotoxin scattering photometry (ESP) method; however, turbidimetric method could not detect endotoxins. We also observed the reduction in the endotoxin after passing through column by ESP method even after the longer duration of PMX. ESP method may more sensitively detect endotoxins than the ordinary turbidimetric method. Moreover, we demonstrated the ability of endotoxin adsorption in spite of the longer duration of PMX. Copyright © 2013 Elsevier Ltd. All rights reserved.

  9. Gamma-ray blind beta particle probe

    DOEpatents

    Weisenberger, Andrew G.

    2001-01-01

    An intra-operative beta particle probe is provided by placing a suitable photomultiplier tube (PMT), micro channel plate (MCP) or other electron multiplier device within a vacuum housing equipped with: 1) an appropriate beta particle permeable window; and 2) electron detection circuitry. Beta particles emitted in the immediate vicinity of the probe window will be received by the electron multiplier device and amplified to produce a detectable signal. Such a device is useful as a gamma insensitive, intra-operative, beta particle probe in surgeries where the patient has been injected with a beta emitting radiopharmaceutical. The method of use of such a device is also described, as is a position sensitive such device.

  10. Time-localized wavelet multiple regression and correlation

    NASA Astrophysics Data System (ADS)

    Fernández-Macho, Javier

    2018-02-01

    This paper extends wavelet methodology to handle comovement dynamics of multivariate time series via moving weighted regression on wavelet coefficients. The concept of wavelet local multiple correlation is used to produce one single set of multiscale correlations along time, in contrast with the large number of wavelet correlation maps that need to be compared when using standard pairwise wavelet correlations with rolling windows. Also, the spectral properties of weight functions are investigated and it is argued that some common time windows, such as the usual rectangular rolling window, are not satisfactory on these grounds. The method is illustrated with a multiscale analysis of the comovements of Eurozone stock markets during this century. It is shown how the evolution of the correlation structure in these markets has been far from homogeneous both along time and across timescales featuring an acute divide across timescales at about the quarterly scale. At longer scales, evidence from the long-term correlation structure can be interpreted as stable perfect integration among Euro stock markets. On the other hand, at intramonth and intraweek scales, the short-term correlation structure has been clearly evolving along time, experiencing a sharp increase during financial crises which may be interpreted as evidence of financial 'contagion'.

  11. Infant-Directed Visual Prosody: Mothers’ Head Movements and Speech Acoustics

    PubMed Central

    Smith, Nicholas A.; Strader, Heather L.

    2014-01-01

    Acoustical changes in the prosody of mothers’ speech to infants are distinct and near universal. However, less is known about the visible properties mothers’ infant-directed (ID) speech, and their relation to speech acoustics. Mothers’ head movements were tracked as they interacted with their infants using ID speech, and compared to movements accompanying their adult-directed (AD) speech. Movement measures along three dimensions of head translation, and three axes of head rotation were calculated. Overall, more head movement was found for ID than AD speech, suggesting that mothers exaggerate their visual prosody in a manner analogous to the acoustical exaggerations in their speech. Regression analyses examined the relation between changing head position and changing acoustical pitch (F0) over time. Head movements and voice pitch were more strongly related in ID speech than in AD speech. When these relations were examined across time windows of different durations, stronger relations were observed for shorter time windows (< 5 sec). However, the particular form of these more local relations did not extend or generalize to longer time windows. This suggests that the multimodal correspondences in speech prosody are variable in form, and occur within limited time spans. PMID:25242907

  12. Studying Room Acoustics using a Monopole-Dipole Microphone Array

    NASA Technical Reports Server (NTRS)

    Begault, Durand R.; Abel, Jonathan S.; Gills, Stephen R. (Technical Monitor)

    1997-01-01

    The use of a soundfield microphone for examining the directional nature of a room impulse response was reported recently. By cross-correlating monopole and co-located dipole microphone signals aligned with left-right, up-down, and front-back axes, a sense of signal direction of arrival is revealed. The current study is concerned with the array's ability to detect individual reflections and directions of arrival, as a function of the cross-correlation window duration. If is window is too long, weak reflections are overlooked; if too short, spurious detections result. Guidelines are presented for setting the window width according to perceptual criteria. Formulas are presented describing the accuracy with which direction of arrival can be estimated as a function of room specifics and measurement noise. The direction of arrival of early reflections is more accurately determined than that of later reflections which are quieter and more numerous. The transition from a fairly directional sound field at the beginning of the room impulse response to a uni-directional diffuse field is examined. Finally, it is shown that measurements from additional dipole orientations can significantly improve the ability to detect reflections and estimate their directions of arrival.

  13. Multi-resolution analysis for region of interest extraction in thermographic nondestructive evaluation

    NASA Astrophysics Data System (ADS)

    Ortiz-Jaramillo, B.; Fandiño Toro, H. A.; Benitez-Restrepo, H. D.; Orjuela-Vargas, S. A.; Castellanos-Domínguez, G.; Philips, W.

    2012-03-01

    Infrared Non-Destructive Testing (INDT) is known as an effective and rapid method for nondestructive inspection. It can detect a broad range of near-surface structuring flaws in metallic and composite components. Those flaws are modeled as a smooth contour centered at peaks of stored thermal energy, termed Regions of Interest (ROI). Dedicated methodologies must detect the presence of those ROIs. In this paper, we present a methodology for ROI extraction in INDT tasks. The methodology deals with the difficulties due to the non-uniform heating. The non-uniform heating affects low spatial/frequencies and hinders the detection of relevant points in the image. In this paper, a methodology for ROI extraction in INDT using multi-resolution analysis is proposed, which is robust to ROI low contrast and non-uniform heating. The former methodology includes local correlation, Gaussian scale analysis and local edge detection. In this methodology local correlation between image and Gaussian window provides interest points related to ROIs. We use a Gaussian window because thermal behavior is well modeled by Gaussian smooth contours. Also, the Gaussian scale is used to analyze details in the image using multi-resolution analysis avoiding low contrast, non-uniform heating and selection of the Gaussian window size. Finally, local edge detection is used to provide a good estimation of the boundaries in the ROI. Thus, we provide a methodology for ROI extraction based on multi-resolution analysis that is better or equal compared with the other dedicate algorithms proposed in the state of art.

  14. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Prior, P; Timmins, R; Wells, R G

    Dual isotope SPECT allows simultaneous measurement of two different tracers in vivo. With In111 (emission energies of 171keV and 245keV) and Tc99m (140keV), quantification of Tc99m is degraded by cross talk from the In111 photons that scatter and are detected at an energy corresponding to Tc99m. TEW uses counts recorded in two narrow windows surrounding the Tc99m primary window to estimate scatter. Iterative TEW corrects for the bias introduced into the TEW estimate resulting from un-scattered counts detected in the scatter windows. The contamination in the scatter windows is iteratively estimated and subtracted as a fraction of the scatter-corrected primarymore » window counts. The iterative TEW approach was validated with a small-animal SPECT/CT camera using a 2.5mL plastic container holding thoroughly mixed Tc99m/In111 activity fractions of 0.15, 0.28, 0.52, 0.99, 2.47 and 6.90. Dose calibrator measurements were the gold standard. Uncorrected for scatter, the Tc99m activity was over-estimated by as much as 80%. Unmodified TEW underestimated the Tc99m activity by 13%. With iterative TEW corrections applied in projection space, the Tc99m activity was estimated within 5% of truth across all activity fractions above 0.15. This is an improvement over the non-iterative TEW, which could not sufficiently correct for scatter in the 0.15 and 0.28 phantoms.« less

  15. Implementation of the Algorithm for Congestion control in the Dynamic Circuit Network (DCN)

    NASA Astrophysics Data System (ADS)

    Nalamwar, H. S.; Ivanov, M. A.; Buddhawar, G. U.

    2017-01-01

    Transport Control Protocol (TCP) incast congestion happens when a number of senders work in parallel with the same server where the high bandwidth and low latency network problem occurs. For many data center network applications such as a search engine, heavy traffic is present on such a server. Incast congestion degrades the entire performance as packets are lost at a server side due to buffer overflow, and as a result, the response time becomes longer. In this work, we focus on TCP throughput, round-trip time (RTT), receive window and retransmission. Our method is based on the proactive adjust of the TCP receive window before the packet loss occurs. We aim to avoid the wastage of the bandwidth by adjusting its size as per the number of packets. To avoid the packet loss, the ICTCP algorithm has been implemented in the data center network (ToR).

  16. A performance comparison of nuclear electric and nuclear thermal propulsion for Mars cargo missions across the 15-17 year synodic cycle

    NASA Technical Reports Server (NTRS)

    Sponaugle, Steven J.; Davis, Steven F.; Everett, Shonn F.

    1992-01-01

    This paper examines the effects of the Earth-Mars synodic cycle on Mars cargo missions. Cargo vehicles that use nuclear thermal propulsion are compared with those that use nuclear electric propulsion. It will be shown that for low energy class cargo missions, nuclear electric systems exhibit far less variation in peak performance over the synodic cycle than comparable nuclear thermal systems. Performance is measured by the amount of usable mass delivered to Mars, as well as the initial mass requirements in nuclear safe orbit. Nuclear electric propulsion systems also have significantly longer injection window opportunities for a given 26 month synodic period, resulting in much greater mission design flexibility. Injection window opportunities over a 20 year period from 2010 to 2030 are examined. This covers a complete synodic cycle and shows its effects on performance for Mars cargo missions.

  17. Preventing the return of fear in humans using reconsolidation update mechanisms.

    PubMed

    Schiller, Daniela; Monfils, Marie-H; Raio, Candace M; Johnson, David C; Ledoux, Joseph E; Phelps, Elizabeth A

    2010-01-07

    Recent research on changing fears has examined targeting reconsolidation. During reconsolidation, stored information is rendered labile after being retrieved. Pharmacological manipulations at this stage result in an inability to retrieve the memories at later times, suggesting that they are erased or persistently inhibited. Unfortunately, the use of these pharmacological manipulations in humans can be problematic. Here we introduce a non-invasive technique to target the reconsolidation of fear memories in humans. We provide evidence that old fear memories can be updated with non-fearful information provided during the reconsolidation window. As a consequence, fear responses are no longer expressed, an effect that lasted at least a year and was selective only to reactivated memories without affecting others. These findings demonstrate the adaptive role of reconsolidation as a window of opportunity to rewrite emotional memories, and suggest a non-invasive technique that can be used safely in humans to prevent the return of fear.

  18. Extended volume coverage in helical cone-beam CT by using PI-line based BPF algorithm

    NASA Astrophysics Data System (ADS)

    Cho, Seungryong; Pan, Xiaochuan

    2007-03-01

    We compared data requirements of filtered-backprojection (FBP) and backprojection-filtration (BPF) algorithms based on PI-lines in helical cone-beam CT. Since the filtration process in FBP algorithm needs all the projection data of PI-lines for each view, the required detector size should be bigger than the size that can cover Tam-Danielsson (T-D) window to avoid data truncation. BPF algorithm, however, requires the projection data only within the T-D window, which means smaller detector size can be used to reconstruct the same image than that in FBP. In other words, a longer helical pitch can be obtained by using BPF algorithm without any truncation artifacts when a fixed detector size is given. The purpose of the work is to demonstrate numerically that extended volume coverage in helical cone-beam CT by using PI-line-based BPF algorithm can be achieved.

  19. Real-Time Detection of Dust Devils from Pressure Readings

    NASA Technical Reports Server (NTRS)

    Wagstaff, Kiri

    2009-01-01

    A method for real-time detection of dust devils at a given location is based on identifying the abrupt, temporary decreases in atmospheric pressure that are characteristic of dust devils as they travel through that location. The method was conceived for use in a study of dust devils on the Martian surface, where bandwidth limitations encourage the transmission of only those blocks of data that are most likely to contain information about features of interest, such as dust devils. The method, which is a form of intelligent data compression, could readily be adapted to use for the same purpose in scientific investigation of dust devils on Earth. In this method, the readings of an atmospheric- pressure sensor are repeatedly digitized, recorded, and processed by an algorithm that looks for extreme deviations from a continually updated model of the current pressure environment. The question in formulating the algorithm is how to model current normal observations and what minimum magnitude deviation can be considered sufficiently anomalous as to indicate the presence of a dust devil. There is no single, simple answer to this question: any answer necessarily entails a compromise between false detections and misses. For the original Mars application, the answer was sought through analysis of sliding time windows of digitized pressure readings. Windows of 5-, 10-, and 15-minute durations were considered. The windows were advanced in increments of 30 seconds. Increments of other sizes can also be used, but computational cost increases as the increment decreases and analysis is performed more frequently. Pressure models were defined using a polynomial fit to the data within the windows. For example, the figure depicts pressure readings from a 10-minute window wherein the model was defined by a third-degree polynomial fit to the readings and dust devils were identified as negative deviations larger than both 3 standard deviations (from the mean) and 0.05 mbar in magnitude. An algorithm embodying the detection scheme of this example was found to yield a miss rate of just 8 percent and a false-detection rate of 57 percent when evaluated on historical pressure-sensor data collected by the Mars Pathfinder lander. Since dust devils occur infrequently over the course of a mission, prioritizing observations that contain successful detections could greatly conserve bandwidth allocated to a given mission. This technique can be used on future Mars landers and rovers, such as Mars Phoenix and the Mars Science Laboratory.

  20. An investigation into the magnitude of the current window and perception of transcutaneous electrical nerve stimulation (TENS) sensation at various frequencies and body sites in healthy human participants.

    PubMed

    Hughes, Nicola; Bennett, Michael I; Johnson, Mark I

    2013-02-01

    Strong nonpainful transcutaneous electrical nerve stimulation (TENS) is prerequisite to a successful analgesic outcome although the ease with which this sensation is achieved is likely to depend on the magnitude of current amplitude (mA) between sensory detection threshold (SDT) and pain threshold, that is, the current window. To measure the current window and participant's perception of the comfort of the TENS sensation at different body sites. A repeated measure cross-over study was conducted using 30 healthy adult volunteers. Current amplitudes (mA) of TENS [2 pulses per second (pps); 30 pps; 80 pps] at SDT, pain threshold, and strong nonpainful intensities were measured at the tibia (bone), knee joint (connective tissue), lower back [paraspinal (skeletal) muscle], volar surface of forearm (nerve) and waist (fat). The amplitude to achieve a strong nonpainful intensity was represented as a percentage of the current window. Data were analyzed using repeated measures analysis of variance. Effects were detected for body site and frequency for SDT (P<0.001, P=0.018, respectively), current window (P<0.001, P<0.001, respectively), and strong nonpainful TENS as a percentage of the current window (P=0.002, P<0.001, respectively). The current window was larger for the knee joint compared with tibia (difference [95% confidence interval]=12.76 mA [4.25, 21.28]; P=0.001) and forearm (10.33 mA [2.62, 18.40]; P=0.006), and for the lower back compared with tibia (12.10 mA [1.65, 22.52]; P=0.015) and forearm (9.65 mA [1.06, 18.24]; P=0.019). The current window was larger for 2 pps compared with 30 pps (P<0.001) and 80 pps (P<0.001). Participants rated strong nonpainful TENS as most comfortable at the lower back (P<0.001) and least comfortable at the tibia and forearm (P<0.001). TENS is most comfortable and easiest to titrate to a strong nonpainful intensity when applied over areas of muscle and soft tissue.

  1. Using exposure windows to explore an elusive biomarker: blood manganese.

    PubMed

    Baker, Marissa G; Stover, Bert; Simpson, Christopher D; Sheppard, Lianne; Seixas, Noah S

    2016-05-01

    We sought to understand the time course between exposure to manganese (Mn) and uptake into the blood, to allow a more meaningful interpretation of exposure biomarker data, and to determine the utility of blood as a biomarker of Mn exposure. Welder trainees were monitored over the course of a five-quarter training program. Each quarter, trainees gave eight blood samples and had personal air monitoring four times. A mixed model was fit to obtain estimates of airborne exposure by welding type (fixed effect), adjusted for subject (random effect). Considering weekends and days absent as zero exposure, estimated exposures were summed over various exposure windows and related to measured blood manganese (MnB) using a mixed model. A relationship consistent with zero was found between MnB and modeled 1 or 7 days of exposure. After 30 days of preceding exposure, a 1 mg-days/m(3) increase in air Mn is associated with a 0.57 ng/mL increase in MnB (95% CI -0.04, 1.19). Considering a 90-day exposure window and a cumulative exposure window, a 1 mg-days/m(3) increase in air Mn is associated with a 0.26 (95% CI 0.005, 0.51) and 0.09 (95% CI 0.006, 0.17) ng/mL increase in MnB, respectively. From this analysis, MnB may begin to act as a biomarker of Mn exposure over longer time periods, or at higher levels of exposure. This novel study design allowed investigation of how MnB relates to different time windows of exposure, representing the most robust Mn exposure assessment in the biomarker literature.

  2. Factors influencing the efficacy of round window dexamethasone protection of residual hearing post-cochlear implant surgery.

    PubMed

    Chang, Andrew; Eastwood, Hayden; Sly, David; James, David; Richardson, Rachael; O'Leary, Stephen

    2009-09-01

    To protect hearing in an experimental model of cochlear implantation by the application of dexamethasone to the round window prior to surgery. The present study examined the dosage and timing relationships required to optimise the hearing protection. Dexamethasone or saline (control) was absorbed into a pledget of the carboxymethylcellulose and hyaluronic acid and applied to the round window of the guinea pig prior to cochlear implantation. The treatment groups were 2% w/v dexamethasone for 30, 60 and 120min; 20% dexamethasone applied for 30min. Auditory sensitivity was determined pre-operatively, and at 1 week after surgery, with pure-tone auditory brainstem response audiometry (2-32kHz). Cochlear implantation was performed via a cochleostomy drilled into the basal turn of the cochlea, into which a miniature cochlear implant dummy electrode was inserted using soft-surgery techniques. ABR thresholds were elevated after cochlear implantation, maximally at 32kHz and to a lesser extent at lower frequencies. Thresholds were less elevated after dexamethasone treatment, and the hearing protection improved when 2% dexamethasone was applied to the round window for longer periods of time prior to implantation. The time that dexamethasone need be applied to achieve hearing protection could be reduced by increasing the concentration of steroid, with a 20% application for 30min achieving similar levels of protection to a 60min application of 2% dexamethasone. Hearing protection is improved by increasing the time that dexamethasone is applied to the round window prior to cochlear implantation, and the waiting time can be reduced by increasing the steroid concentration. These results suggest that the diffusion dexamethasone through the cochlea is the prime determinant of the extent of hearing protection.

  3. Evaluation of sliding window correlation performance for characterizing dynamic functional connectivity and brain states

    PubMed Central

    Shakil, Sadia; Lee, Chin-Hui; Keilholz, Shella Dawn

    2016-01-01

    A promising recent development in the study of brain function is the dynamic analysis of resting-state functional MRI scans, which can enhance understanding of normal cognition and alterations that result from brain disorders. One widely used method of capturing the dynamics of functional connectivity is sliding window correlation (SWC). However, in the absence of a “gold standard” for comparison, evaluating the performance of the SWC in typical resting-state data is challenging. This study uses simulated networks (SNs) with known transitions to examine the effects of parameters such as window length, window offset, window type, noise, filtering, and sampling rate on the SWC performance. The SWC time course was calculated for all node pairs of each SN and then clustered using the k-means algorithm to determine how resulting brain states match known configurations and transitions in the SNs. The outcomes show that the detection of state transitions and durations in the SWC is most strongly influenced by the window length and offset, followed by noise and filtering parameters. The effect of the image sampling rate was relatively insignificant. Tapered windows provide less sensitivity to state transitions than rectangular windows, which could be the result of the sharp transitions in the SNs. Overall, the SWC gave poor estimates of correlation for each brain state. Clustering based on the SWC time course did not reliably reflect the underlying state transitions unless the window length was comparable to the state duration, highlighting the need for new adaptive window analysis techniques. PMID:26952197

  4. Ionospheric gravity wave measurements with the USU dynasonde

    NASA Technical Reports Server (NTRS)

    Berkey, Frank T.; Deng, Jun Yuan

    1992-01-01

    A method for the measurement of ionospheric Gravity Wave (GW) using the USU Dynasonde is outlined. This method consists of a series of individual procedures, which includes functions for data acquisition, adaptive scaling, polarization discrimination, interpolation and extrapolation, digital filtering, windowing, spectrum analysis, GW detection, and graphics display. Concepts of system theory are applied to treat the ionosphere as a system. An adaptive ionogram scaling method was developed for automatically extracting ionogram echo traces from noisy raw sounding data. The method uses the well known Least Mean Square (LMS) algorithm to form a stochastic optimal estimate of the echo trace which is then used to control a moving window. The window tracks the echo trace, simultaneously eliminating the noise and interference. Experimental results show that the proposed method functions as designed. Case studies which extract GW from ionosonde measurements were carried out using the techniques described. Geophysically significant events were detected and the resultant processed results are illustrated graphically. This method was also developed for real time implementation in mind.

  5. Modified skin window technique for the extended characterisation of acute inflammation in humans

    PubMed Central

    Marks, D. J. B.; Radulovic, M.; McCartney, S.; Bloom, S.; Segal, A. W.

    2009-01-01

    Objective To modify the skin window technique for extended analysis of acute inflammatory responses in humans, and demonstrate its applicability for investigating disease. Subjects 15 healthy subjects and 5 Crohn’s patients. Treatment Skin windows, created by dermal abrasion, were overlaid for various durations with filter papers saturated in saline, 100 ng/ml muramyl dipeptide (MDP) or 10 μg/ml interleukin-8 (IL-8). Methods Exuded leukocytes were analyzed by microscopy, immunoblot, DNA-bound transcription factor arrays and RT-PCR. Inflammatory mediators were quantified by ELISA. Results Infiltrating leukocytes were predominantly neutrophils. Numerous secreted mediators were detectable. MDP and IL-8 enhanced responses. Many signalling proteins were phosphorylated with differential patterns in Crohn’s patients, notably PKC α/β hyperphosphorylation (11.3 ± 3.1 vs 1.2 ± 0.9 units, P < 0.02). Activities of 44 transcription factors were detectable, and sufficient RNA isolated for expression analysis of over 400 genes. Conclusions The modifications enable broad characterisation of inflammatory responses and administration of exogenous immunomodulators. PMID:17522815

  6. Detection of metabolites of lysergic acid diethylamide (LSD) in human urine specimens: 2-oxo-3-hydroxy-LSD, a prevalent metabolite of LSD.

    PubMed

    Poch, G K; Klette, K L; Hallare, D A; Manglicmot, M G; Czarny, R J; McWhorter, L K; Anderson, C J

    1999-03-05

    Seventy-four urine specimens previously found to contain lysergic acid diethylamide (LSD) by gas chromatography-mass spectrometry (GC-MS) were analyzed by a new procedure for the LSD metabolite 2-oxo-3-hydroxy-LSD (O-H-LSD) using a Finnigan LC-MS-MS system. This procedure proved to be less complex, shorter to perform and provides cleaner chromatographic characteristics than the method currently utilized by the Navy Drug Screening Laboratories for the extraction of LSD from urine by GC-MS. All of the specimens used in the study screened positive for LSD by radioimmunoassay (Roche Abuscreen). Analysis by GC-MS revealed detectable amounts of LSD in all of the specimens. In addition, isolysergic diethylamide (iso-LSD), a byproduct of LSD synthesis, was quantitated in 64 of the specimens. Utilizing the new LC-MS-MS method, low levels of N-desmethyl-LSD (nor-LSD), another identified LSD metabolite, were detected in some of the specimens. However, all 74 specimens contained O-H-LSD at significantly higher concentrations than LSD, iso-LSD, or nor-LSD alone. The O-H-LSD concentration ranged from 732 to 112 831 pg/ml (mean, 16340 pg/ml) by quantification with an internal standard. The ratio of O-H-LSD to LSD ranged from 1.1 to 778.1 (mean, 42.9). The presence of O-H-LSD at substantially higher concentrations than LSD suggests that the analysis for O-H-LSD as the target analyte by employing LC-MS-MS will provide a much longer window of detection for the use of LSD than the analysis of the parent compound, LSD.

  7. Windows Instant Messaging App Forensics: Facebook and Skype as Case Studies

    PubMed Central

    Yang, Teing Yee; Dehghantanha, Ali; Choo, Kim-Kwang Raymond; Muda, Zaiton

    2016-01-01

    Instant messaging (IM) has changed the way people communicate with each other. However, the interactive and instant nature of these applications (apps) made them an attractive choice for malicious cyber activities such as phishing. The forensic examination of IM apps for modern Windows 8.1 (or later) has been largely unexplored, as the platform is relatively new. In this paper, we seek to determine the data remnants from the use of two popular Windows Store application software for instant messaging, namely Facebook and Skype on a Windows 8.1 client machine. This research contributes to an in-depth understanding of the types of terrestrial artefacts that are likely to remain after the use of instant messaging services and application software on a contemporary Windows operating system. Potential artefacts detected during the research include data relating to the installation or uninstallation of the instant messaging application software, log-in and log-off information, contact lists, conversations, and transferred files. PMID:26982207

  8. Windows Instant Messaging App Forensics: Facebook and Skype as Case Studies.

    PubMed

    Yang, Teing Yee; Dehghantanha, Ali; Choo, Kim-Kwang Raymond; Muda, Zaiton

    2016-01-01

    Instant messaging (IM) has changed the way people communicate with each other. However, the interactive and instant nature of these applications (apps) made them an attractive choice for malicious cyber activities such as phishing. The forensic examination of IM apps for modern Windows 8.1 (or later) has been largely unexplored, as the platform is relatively new. In this paper, we seek to determine the data remnants from the use of two popular Windows Store application software for instant messaging, namely Facebook and Skype on a Windows 8.1 client machine. This research contributes to an in-depth understanding of the types of terrestrial artefacts that are likely to remain after the use of instant messaging services and application software on a contemporary Windows operating system. Potential artefacts detected during the research include data relating to the installation or uninstallation of the instant messaging application software, log-in and log-off information, contact lists, conversations, and transferred files.

  9. Performance of the round window soft coupler for the backward stimulation of the cochlea in a temporal bone model.

    PubMed

    Gostian, Antoniu-Oreste; Schwarz, David; Mandt, Philipp; Anagiotos, Andreas; Ortmann, Magdalene; Pazen, David; Beutner, Dirk; Hüttenbrink, Karl-Bernd

    2016-11-01

    The round window vibroplasty is a feasible option for the treatment of conductive, sensorineural and mixed hearing loss. Although clinical data suggest a satisfying clinical outcome with various coupling methods, the most efficient coupling technique of the floating mass transducer to the round window is still a matter of debate. For this, a soft silicone-made coupler has been developed recently that aims to ease and optimize the stimulation of the round window membrane of this middle ear implant. We performed a temporal bone study evaluating the performance of the soft coupler compared to the coupling with individually shaped cartilage, perichondrium and the titanium round window coupler with loads up to 20 mN at the unaltered and fully exposed round window niche. The stimulation of the cochlea was measured by the volume velocities of the stapes footplate detected by a laser Doppler vibrometer. The coupling method was computed as significant factor with cartilage and perichondrium allowing for the highest volume velocities followed by the soft and titanium coupler. Exposure of the round window niche allowed for higher volume velocities while the applied load did not significantly affect the results. The soft coupler allows for a good contact to the round window membrane and an effective backward stimulation of the cochlea. Clinical data are mandatory to evaluate performance of this novel coupling method in vivo.

  10. Vacuum system for the SAMURAI spectrometer

    NASA Astrophysics Data System (ADS)

    Shimizu, Y.; Otsu, H.; Kobayashi, T.; Kubo, T.; Motobayashi, T.; Sato, H.; Yoneda, K.

    2013-12-01

    The first commissioning experiment of the SAMURAI spectrometer and its beam line was performed in March, 2012. The vacuum system for the SAMURAI spectrometer includes its beam line and the SAMURAI vacuum chamber with the windows for detecting neutrons and charged particles. The window for neutrons was made of stainless steel with a thickness of 3 mm and was designed with a shape of partial cylinder to support itself against the atmospheric pressure. The window for charged particles was of the combination of Kevlar and Mylar with the thickness of 280 and 75 μm, respectively. The pressure in the vacuum system was at a few Pa throughout the commissioning experiment.

  11. The Longterm Centimeter-band Total Flux and Linear Polarization Properties of the Pearson-Readhead Survey Sources

    NASA Astrophysics Data System (ADS)

    Aller, M. F.; Aller, H. D.; Hughes, P. A.

    2001-12-01

    Using centimeter-band total flux and linear polarization observations of the Pearson-Readhead sample sources systematically obtained with the UMRAO 26-m radio telescope during the past 16 years, we identify the range of variability properties and their temporal changes as functions of both optical and radio morphological classification. We find that our earlier statistical analysis, based on a time window of 6.4 years, did not delineate the full amplitude range of the total flux variability; further, several galaxies exhibit longterm, systematic changes or rather infrequent outbursts requiring long term observations for detection. Using radio classification as a delineator, we confirm, and find additional evidence, that significant changes in flux density can occur in steep spectrum and lobe-dominated objects as well as in compact, flat-spectrum objects. We find that statistically the time-averaged total flux density spectra steepen when longer time windows are included, which we attribute to a selection effect in the source sample. We have identified preferred orientations of the electric vector of the polarized emission (EVPA) in an unbiased manner in several sources, including several QSOs which have exhibited large variations in total flux while maintaining stable EVPAs, and compared these with orientations of the flow direction indicated by VLB morphology. We have looked for systematic, monotonic changes in EVPA which might be expected in the emission from a precessing jet, but none were identified. A Scargle periodogram analysis found no strong evidence for periodicity in any of the sample sources. We thank the NSF for grants AST-8815678, AST-9120224, AST-9421979, and AST-9900723 which provided partial support for this research. The operation of the 26-meter telescope is supported by the University of Michigan Department of Astronomy.

  12. Transparency of 2μ m window of Titan's atmosphere

    NASA Astrophysics Data System (ADS)

    Rannou, P.; Seignovert, B.; Le Mouélic, S.; Maltagliati, L.; Rey, M.; Sotin, C.

    2018-02-01

    Titan's atmosphere is optically thick and hides the surface and the lower layers from the view at almost all wavelengths. However, because gaseous absorptions are spectrally selective, some narrow spectral intervals are relatively transparent and allow to probe the surface. To use these intervals (called windows) a good knowledge of atmospheric absorption is necessary. Once gas spectroscopic linelists are well established, the absorption inside windows depends on the way the far wings of the methane absorption lines are cut-off. We know that the intensity in all the windows can be explained with the same cut-off parameters, except for the window at 2 μm. This discrepancy is generally treated with a workaround which consists in using a different cut-off description for this specific window. This window is relatively transparent and surface may have specific spectral signatures that could be detected. Thus, a good knowledge of atmosphere opacities is essential and our scope is to better understand what causes the difference between the 2 μm window and the other windows. In this work, we used scattered light at the limb and transmissions in occultation observed with VIMS (Visual Infrared Mapping Spectrometer) onboard Cassini, around the 2 μm window. Data shows an absorption feature that participates to the shape of this window. Our atmospheric model fits well the VIMS data at 2 μm with the same cut-off than for the other windows, provided an additional absorption is introduced in the middle of the window around ≃ 2.065 μm. It explains well the discrepency between the cut-off used at 2 μm, and we show that a gas with a fairly constant mixing ratio, possibly ethane, may be the cause of this absorption. Finally, we studied the impact of this absorption on the retrieval of the surface reflectivity and found that it is significant.

  13. Bond-selective imaging of deep tissue through the optical window between 1600 and 1850 nm.

    PubMed

    Wang, Pu; Wang, Han-Wei; Sturek, Michael; Cheng, Ji-Xin

    2012-01-01

    We report the employment of an optical window between 1600 nm and 1850 nm for bond-selective deep tissue imaging through harmonic vibrational excitation and acoustic detection of resultant pressure waves. In this window where a local minimum of water absorption resides, we found a 5 times enhancement of photoacoustic signal by first overtone excitation of the methylene group CH(2) at 1730 nm, compared to the second overtone excitation at 1210 nm. The enhancement allows 3D mapping of intramuscular fat with improved contrast and of lipid deposition inside an atherosclerotic artery wall in the presence of blood. Moreover, lipid and protein are differentiated based on the first overtone absorption profiles of CH(2) and methyl group CH(3) in this window. Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  14. Morphological Characteristics of Round Window Niche in Congenital Aural Atresia and Stenosis Patients.

    PubMed

    Chen, Keguang; Lyu, Huiying; Xie, Youzhou; Yang, Lin; Zhang, Tianyu; Dai, Peidong

    2015-01-01

    The aim of this study was to measure the round window niche (RWN) among congenital aural atresia (CAA), congenital aural stenosis (CAS) and control groups and to analyze whether differences exist between them. Computed tomography images of 10 normal subjects (20 ears), 27 CAS patients (30 ears) and 25 CAA patients (30 ears) were analyzed. We measured RWN on the basis of 3-dimensional reconstruction. The anterior wall length and the depth of RWN were smaller in control group than those in the CAS group; furthermore, the anterior wall length and the depth of RWN in CAS group were smaller than those in CAA group (P < 0.05). The posterior wall length of RWN was found smaller in the control group than that in both hCAS and CAA groups (P < 0.05). The superior and inferior wall lengths of RWN were found smaller in control group than those in the CAA group (P < 0.05). There were no statistically significant differences in the sizes of the round window membrane and niche opening or the angle between the plane of the RWN opening and the round window membrane plane among all groups. The RWN walls lengths and its depth tended to be longer with the aggravation of the aural malformations. Our calculation results may provide some information for a better design and a safer implantation of the floating mass transducer in the area of RWN.

  15. Small-window parametric imaging based on information entropy for ultrasound tissue characterization

    PubMed Central

    Tsui, Po-Hsiang; Chen, Chin-Kuo; Kuo, Wen-Hung; Chang, King-Jen; Fang, Jui; Ma, Hsiang-Yang; Chou, Dean

    2017-01-01

    Constructing ultrasound statistical parametric images by using a sliding window is a widely adopted strategy for characterizing tissues. Deficiency in spatial resolution, the appearance of boundary artifacts, and the prerequisite data distribution limit the practicability of statistical parametric imaging. In this study, small-window entropy parametric imaging was proposed to overcome the above problems. Simulations and measurements of phantoms were executed to acquire backscattered radiofrequency (RF) signals, which were processed to explore the feasibility of small-window entropy imaging in detecting scatterer properties. To validate the ability of entropy imaging in tissue characterization, measurements of benign and malignant breast tumors were conducted (n = 63) to compare performances of conventional statistical parametric (based on Nakagami distribution) and entropy imaging by the receiver operating characteristic (ROC) curve analysis. The simulation and phantom results revealed that entropy images constructed using a small sliding window (side length = 1 pulse length) adequately describe changes in scatterer properties. The area under the ROC for using small-window entropy imaging to classify tumors was 0.89, which was higher than 0.79 obtained using statistical parametric imaging. In particular, boundary artifacts were largely suppressed in the proposed imaging technique. Entropy enables using a small window for implementing ultrasound parametric imaging. PMID:28106118

  16. Small-window parametric imaging based on information entropy for ultrasound tissue characterization

    NASA Astrophysics Data System (ADS)

    Tsui, Po-Hsiang; Chen, Chin-Kuo; Kuo, Wen-Hung; Chang, King-Jen; Fang, Jui; Ma, Hsiang-Yang; Chou, Dean

    2017-01-01

    Constructing ultrasound statistical parametric images by using a sliding window is a widely adopted strategy for characterizing tissues. Deficiency in spatial resolution, the appearance of boundary artifacts, and the prerequisite data distribution limit the practicability of statistical parametric imaging. In this study, small-window entropy parametric imaging was proposed to overcome the above problems. Simulations and measurements of phantoms were executed to acquire backscattered radiofrequency (RF) signals, which were processed to explore the feasibility of small-window entropy imaging in detecting scatterer properties. To validate the ability of entropy imaging in tissue characterization, measurements of benign and malignant breast tumors were conducted (n = 63) to compare performances of conventional statistical parametric (based on Nakagami distribution) and entropy imaging by the receiver operating characteristic (ROC) curve analysis. The simulation and phantom results revealed that entropy images constructed using a small sliding window (side length = 1 pulse length) adequately describe changes in scatterer properties. The area under the ROC for using small-window entropy imaging to classify tumors was 0.89, which was higher than 0.79 obtained using statistical parametric imaging. In particular, boundary artifacts were largely suppressed in the proposed imaging technique. Entropy enables using a small window for implementing ultrasound parametric imaging.

  17. Windows of sensitivity to toxic chemicals in the motor effects development.

    PubMed

    Ingber, Susan Z; Pohl, Hana R

    2016-02-01

    Many chemicals currently used are known to elicit nervous system effects. In addition, approximately 2000 new chemicals introduced annually have not yet undergone neurotoxicity testing. This review concentrated on motor development effects associated with exposure to environmental neurotoxicants to help identify critical windows of exposure and begin to assess data needs based on a subset of chemicals thoroughly reviewed by the Agency for Toxic Substances and Disease Registry (ATSDR) in Toxicological Profiles and Addenda. Multiple windows of sensitivity were identified that differed based on the maturity level of the neurological system at the time of exposure, as well as dose and exposure duration. Similar but distinct windows were found for both motor activity (GD 8-17 [rats], GD 12-14 and PND 3-10 [mice]) and motor function performance (insufficient data for rats, GD 12-17 [mice]). Identifying specific windows of sensitivity in animal studies was hampered by study designs oriented towards detection of neurotoxicity that occurred at any time throughout the developmental process. In conclusion, while this investigation identified some critical exposure windows for motor development effects, it demonstrates a need for more acute duration exposure studies based on neurodevelopmental windows, particularly during the exposure periods identified in this review. Published by Elsevier Inc.

  18. Windows of sensitivity to toxic chemicals in the motor effects development✩

    PubMed Central

    Ingber, Susan Z.; Pohl, Hana R.

    2017-01-01

    Many chemicals currently used are known to elicit nervous system effects. In addition, approximately 2000 new chemicals introduced annually have not yet undergone neurotoxicity testing. This review concentrated on motor development effects associated with exposure to environmental neurotoxicants to help identify critical windows of exposure and begin to assess data needs based on a subset of chemicals thoroughly reviewed by the Agency for Toxic Substances and Disease Registry (ATSDR) in Toxicological Profiles and Addenda. Multiple windows of sensitivity were identified that differed based on the maturity level of the neurological system at the time of exposure, as well as dose and exposure duration. Similar but distinct windows were found for both motor activity (GD 8–17 [rats], GD 12–14 and PND 3–10 [mice]) and motor function performance (insufficient data for rats, GD 12–17 [mice]). Identifying specific windows of sensitivity in animal studies was hampered by study designs oriented towards detection of neurotoxicity that occurred at any time throughout the developmental process. In conclusion, while this investigation identified some critical exposure windows for motor development effects, it demonstrates a need for more acute duration exposure studies based on neurodevelopmental windows, particularly during the exposure periods identified in this review. PMID:26686904

  19. Probing the Time Scale of FPOP (Fast Photochemical Oxidation of Proteins): Radical Reactions Extend Over Tens of Milliseconds

    NASA Astrophysics Data System (ADS)

    Vahidi, Siavash; Konermann, Lars

    2016-07-01

    Hydroxyl radical (ṡOH) labeling with mass spectrometry detection reports on protein conformations and interactions. Fast photochemical oxidation of proteins (FPOP) involves ṡOH production via H2O2 photolysis by UV laser pulses inside a flow tube. The experiments are conducted in the presence of a scavenger (usually glutamine) that shortens the ṡOH lifetime. The literature claims that FPOP takes place within 1 μs. This ultrafast time scale implies that FPOP should be immune to labeling-induced artifacts that may be encountered with other techniques. Surprisingly, the FPOP time scale has never been validated in direct kinetic measurements. Here we employ flash photolysis for probing oxidation processes under typical FPOP conditions. Bleaching of the reporter dye cyanine-5 (Cy5) served as readout of the time-dependent radical milieu. Surprisingly, Cy5 oxidation extends over tens of milliseconds. This time range is four orders of magnitude longer than expected from the FPOP literature. We demonstrate that the glutamine scavenger generates metastable secondary radicals in the FPOP solution, and that these radicals lengthen the time frame of Cy5 oxidation. Cy5 and similar dyes are widely used for monitoring the radical dose experienced by proteins in solution. The measured Cy5 kinetics thus strongly suggest that protein oxidation in FPOP extends over a much longer time window than previously thought (i.e., many milliseconds instead of one microsecond). The optical approach developed here should be suitable for assessing the performance of future FPOP-like techniques with improved temporal labeling characteristics.

  20. Nonlinear Recurrent Dynamics and Long-Term Nonstationarities in EEG Alpha Cortical Activity: Implications for Choosing Adequate Segment Length in Nonlinear EEG Analyses.

    PubMed

    Cerquera, Alexander; Vollebregt, Madelon A; Arns, Martijn

    2018-03-01

    Nonlinear analysis of EEG recordings allows detection of characteristics that would probably be neglected by linear methods. This study aimed to determine a suitable epoch length for nonlinear analysis of EEG data based on its recurrence rate in EEG alpha activity (electrodes Fz, Oz, and Pz) from 28 healthy and 64 major depressive disorder subjects. Two nonlinear metrics, Lempel-Ziv complexity and scaling index, were applied in sliding windows of 20 seconds shifted every 1 second and in nonoverlapping windows of 1 minute. In addition, linear spectral analysis was carried out for comparison with the nonlinear results. The analysis with sliding windows showed that the cortical dynamics underlying alpha activity had a recurrence period of around 40 seconds in both groups. In the analysis with nonoverlapping windows, long-term nonstationarities entailed changes over time in the nonlinear dynamics that became significantly different between epochs across time, which was not detected with the linear spectral analysis. Findings suggest that epoch lengths shorter than 40 seconds neglect information in EEG nonlinear studies. In turn, linear analysis did not detect characteristics from long-term nonstationarities in EEG alpha waves of control subjects and patients with major depressive disorder patients. We recommend that application of nonlinear metrics in EEG time series, particularly of alpha activity, should be carried out with epochs around 60 seconds. In addition, this study aimed to demonstrate that long-term nonlinearities are inherent to the cortical brain dynamics regardless of the presence or absence of a mental disorder.

  1. Autopiquer - a Robust and Reliable Peak Detection Algorithm for Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Kilgour, David P. A.; Hughes, Sam; Kilgour, Samantha L.; Mackay, C. Logan; Palmblad, Magnus; Tran, Bao Quoc; Goo, Young Ah; Ernst, Robert K.; Clarke, David J.; Goodlett, David R.

    2017-02-01

    We present a simple algorithm for robust and unsupervised peak detection by determining a noise threshold in isotopically resolved mass spectrometry data. Solving this problem will greatly reduce the subjective and time-consuming manual picking of mass spectral peaks and so will prove beneficial in many research applications. The Autopiquer approach uses autocorrelation to test for the presence of (isotopic) structure in overlapping windows across the spectrum. Within each window, a noise threshold is optimized to remove the most unstructured data, whilst keeping as much of the (isotopic) structure as possible. This algorithm has been successfully demonstrated for both peak detection and spectral compression on data from many different classes of mass spectrometer and for different sample types, and this approach should also be extendible to other types of data that contain regularly spaced discrete peaks.

  2. Autopiquer - a Robust and Reliable Peak Detection Algorithm for Mass Spectrometry.

    PubMed

    Kilgour, David P A; Hughes, Sam; Kilgour, Samantha L; Mackay, C Logan; Palmblad, Magnus; Tran, Bao Quoc; Goo, Young Ah; Ernst, Robert K; Clarke, David J; Goodlett, David R

    2017-02-01

    We present a simple algorithm for robust and unsupervised peak detection by determining a noise threshold in isotopically resolved mass spectrometry data. Solving this problem will greatly reduce the subjective and time-consuming manual picking of mass spectral peaks and so will prove beneficial in many research applications. The Autopiquer approach uses autocorrelation to test for the presence of (isotopic) structure in overlapping windows across the spectrum. Within each window, a noise threshold is optimized to remove the most unstructured data, whilst keeping as much of the (isotopic) structure as possible. This algorithm has been successfully demonstrated for both peak detection and spectral compression on data from many different classes of mass spectrometer and for different sample types, and this approach should also be extendible to other types of data that contain regularly spaced discrete peaks. Graphical Abstract ᅟ.

  3. Too Little, Too Late: How the Tidal Evolution of Hot Jupiters Affects Transit Surveys of Clusters

    NASA Technical Reports Server (NTRS)

    Debes, John H.; Jackson, Brian

    2010-01-01

    The tidal evolution of hot Jupiters may change the efficiency of transit surveys of stellar clusters. The orbital decay that hot Jupiters suffer may result in their destruction, leaving fewer transiting planets in older clusters. We calculate the impact tidal evolution has for different assumed stellar populations, including that of 47 Tuc, a globular cluster that was the focus of an intense HST search for transits. We find that in older clusters one expects to detect fewer transiting planets by a factor of two for surveys sensitive to Jupiter-like planets in orbits out to 0.5 AU, and up to a factor of 25 for surveys sensitive to Jupiter-like planets in orbits out to 0.08 AU. Additionally, tidal evolution affects the distribution of transiting planets as a function of semi-major axis, producing larger orbital period gaps for transiting planets as the age of the cluster increases. Tidal evolution can explain the lack of detected exoplanets in 47 Tuc without invoking other mechanisms. Four open clusters residing within the Kepler fields of view have ages that span 0.4-8 Gyr-if Kepler can observe a significant number of planets in these clusters, it will provide key tests for our tidal evolution hypothesis. Finally, our results suggest that observers wishing to discover transiting planets in clusters must have sufficient accuracy to detect lower mass planets, search larger numbers of cluster members, or have longer observation windows to be confident that a significant number of transits will occur for a population of stars.

  4. On the relationship between instantaneous phase synchrony and correlation-based sliding windows for time-resolved fMRI connectivity analysis.

    PubMed

    Pedersen, Mangor; Omidvarnia, Amir; Zalesky, Andrew; Jackson, Graeme D

    2018-06-08

    Correlation-based sliding window analysis (CSWA) is the most commonly used method to estimate time-resolved functional MRI (fMRI) connectivity. However, instantaneous phase synchrony analysis (IPSA) is gaining popularity mainly because it offers single time-point resolution of time-resolved fMRI connectivity. We aim to provide a systematic comparison between these two approaches, on both temporal and topological levels. For this purpose, we used resting-state fMRI data from two separate cohorts with different temporal resolutions (45 healthy subjects from Human Connectome Project fMRI data with repetition time of 0.72 s and 25 healthy subjects from a separate validation fMRI dataset with a repetition time of 3 s). For time-resolved functional connectivity analysis, we calculated tapered CSWA over a wide range of different window lengths that were temporally and topologically compared to IPSA. We found a strong association in connectivity dynamics between IPSA and CSWA when considering the absolute values of CSWA. The association between CSWA and IPSA was stronger for a window length of ∼20 s (shorter than filtered fMRI wavelength) than ∼100 s (longer than filtered fMRI wavelength), irrespective of the sampling rate of the underlying fMRI data. Narrow-band filtering of fMRI data (0.03-0.07 Hz) yielded a stronger relationship between IPSA and CSWA than wider-band (0.01-0.1 Hz). On a topological level, time-averaged IPSA and CSWA nodes were non-linearly correlated for both short (∼20 s) and long (∼100 s) windows, mainly because nodes with strong negative correlations (CSWA) displayed high phase synchrony (IPSA). IPSA and CSWA were anatomically similar in the default mode network, sensory cortex, insula and cerebellum. Our results suggest that IPSA and CSWA provide comparable characterizations of time-resolved fMRI connectivity for appropriately chosen window lengths. Although IPSA requires narrow-band fMRI filtering, we recommend the use of IPSA given that it does not mandate a (semi-)arbitrary choice of window length and window overlap. A code for calculating IPSA is provided. Copyright © 2018. Published by Elsevier Inc.

  5. Series length used during trend analysis affects sensitivity to changes in progression rate in the ocular hypertension treatment study.

    PubMed

    Gardiner, Stuart K; Demirel, Shaban; De Moraes, Carlos Gustavo; Liebmann, Jeffrey M; Cioffi, George A; Ritch, Robert; Gordon, Mae O; Kass, Michael A

    2013-02-15

    Trend analysis techniques to detect glaucomatous progression typically assume a constant rate of change. This study uses data from the Ocular Hypertension Treatment Study to assess whether this assumption decreases sensitivity to changes in progression rate, by including earlier periods of stability. Series of visual fields (mean 24 per eye) completed at 6-month intervals from participants randomized initially to observation were split into subseries before and after the initiation of treatment (the "split-point"). The mean deviation rate of change (MDR) was derived using these entire subseries, and using only the window length (W) tests nearest the split-point, for different window lengths of W tests. A generalized estimating equation model was used to detect changes in MDR occurring at the split-point. Using shortened subseries with W = 7 tests, the MDR slowed by 0.142 dB/y upon initiation of treatment (P < 0.001), and the proportion of eyes showing "rapid deterioration" (MDR <-0.5 dB/y with P < 5%) decreased from 11.8% to 6.5% (P < 0.001). Using the entire sequence, no significant change in MDR was detected (P = 0.796), and there was no change in the proportion of eyes progressing (P = 0.084). Window lengths 6 ≤ W ≤ 9 produced similar benefits. Event analysis revealed a beneficial treatment effect in this dataset. This effect was not detected by linear trend analysis applied to entire series, but was detected when using shorter subseries of length between six and nine fields. Using linear trend analysis on the entire field sequence may not be optimal for detecting and monitoring progression. Nonlinear analyses may be needed for long series of fields. (ClinicalTrials.gov number, NCT00000125.).

  6. Hierarchical structure of the energy landscape of proteins revisited by time series analysis. I. Mimicking protein dynamics in different time scales

    NASA Astrophysics Data System (ADS)

    Alakent, Burak; Camurdan, Mehmet C.; Doruker, Pemra

    2005-10-01

    Time series models, which are constructed from the projections of the molecular-dynamics (MD) runs on principal components (modes), are used to mimic the dynamics of two proteins: tendamistat and immunity protein of colicin E7 (ImmE7). Four independent MD runs of tendamistat and three independent runs of ImmE7 protein in vacuum are used to investigate the energy landscapes of these proteins. It is found that mean-square displacements of residues along the modes in different time scales can be mimicked by time series models, which are utilized in dividing protein dynamics into different regimes with respect to the dominating motion type. The first two regimes constitute the dominance of intraminimum motions during the first 5ps and the random walk motion in a hierarchically higher-level energy minimum, which comprise the initial time period of the trajectories up to 20-40ps for tendamistat and 80-120ps for ImmE7. These are also the time ranges within which the linear nonstationary time series are completely satisfactory in explaining protein dynamics. Encountering energy barriers enclosing higher-level energy minima constrains the random walk motion of the proteins, and pseudorelaxation processes at different levels of minima are detected in tendamistat, depending on the sampling window size. Correlation (relaxation) times of 30-40ps and 150-200ps are detected for two energy envelopes of successive levels for tendamistat, which gives an overall idea about the hierarchical structure of the energy landscape. However, it should be stressed that correlation times of the modes are highly variable with respect to conformational subspaces and sampling window sizes, indicating the absence of an actual relaxation. The random-walk step sizes and the time length of the second regime are used to illuminate an important difference between the dynamics of the two proteins, which cannot be clarified by the investigation of relaxation times alone: ImmE7 has lower-energy barriers enclosing the higher-level energy minimum, preventing the protein to relax and letting it move in a random-walk fashion for a longer period of time.

  7. Steganography anomaly detection using simple one-class classification

    NASA Astrophysics Data System (ADS)

    Rodriguez, Benjamin M.; Peterson, Gilbert L.; Agaian, Sos S.

    2007-04-01

    There are several security issues tied to multimedia when implementing the various applications in the cellular phone and wireless industry. One primary concern is the potential ease of implementing a steganography system. Traditionally, the only mechanism to embed information into a media file has been with a desktop computer. However, as the cellular phone and wireless industry matures, it becomes much simpler for the same techniques to be performed using a cell phone. In this paper, two methods are compared that classify cell phone images as either an anomaly or clean, where a clean image is one in which no alterations have been made and an anomalous image is one in which information has been hidden within the image. An image in which information has been hidden is known as a stego image. The main concern in detecting steganographic content with machine learning using cell phone images is in training specific embedding procedures to determine if the method has been used to generate a stego image. This leads to a possible flaw in the system when the learned model of stego is faced with a new stego method which doesn't match the existing model. The proposed solution to this problem is to develop systems that detect steganography as anomalies, making the embedding method irrelevant in detection. Two applicable classification methods for solving the anomaly detection of steganographic content problem are single class support vector machines (SVM) and Parzen-window. Empirical comparison of the two approaches shows that Parzen-window outperforms the single class SVM most likely due to the fact that Parzen-window generalizes less.

  8. Simulation of a Real-Time Brain Computer Interface for Detecting a Self-Paced Hitting Task.

    PubMed

    Hammad, Sofyan H; Kamavuako, Ernest N; Farina, Dario; Jensen, Winnie

    2016-12-01

    An invasive brain-computer interface (BCI) is a promising neurorehabilitation device for severely disabled patients. Although some systems have been shown to work well in restricted laboratory settings, their utility must be tested in less controlled, real-time environments. Our objective was to investigate whether a specific motor task could be reliably detected from multiunit intracortical signals from freely moving animals in a simulated, real-time setting. Intracortical signals were first obtained from electrodes placed in the primary motor cortex of four rats that were trained to hit a retractable paddle (defined as a "Hit"). In the simulated real-time setting, the signal-to-noise-ratio was first increased by wavelet denoising. Action potentials were detected, and features were extracted (spike count, mean absolute values, entropy, and combination of these features) within pre-defined time windows (200 ms, 300 ms, and 400 ms) to classify the occurrence of a "Hit." We found higher detection accuracy of a "Hit" (73.1%, 73.4%, and 67.9% for the three window sizes, respectively) when the decision was made based on a combination of features rather than on a single feature. However, the duration of the window length was not statistically significant (p = 0.5). Our results showed the feasibility of detecting a motor task in real time in a less restricted environment compared to environments commonly applied within invasive BCI research, and they showed the feasibility of using information extracted from multiunit recordings, thereby avoiding the time-consuming and complex task of extracting and sorting single units. © 2016 International Neuromodulation Society.

  9. Automated Weight-Window Generation for Threat Detection Applications Using ADVANTG

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mosher, Scott W; Miller, Thomas Martin; Evans, Thomas M

    2009-01-01

    Deterministic transport codes have been used for some time to generate weight-window parameters that can improve the efficiency of Monte Carlo simulations. As the use of this hybrid computational technique is becoming more widespread, the scope of applications in which it is being applied is expanding. An active source of new applications is the field of homeland security--particularly the detection of nuclear material threats. For these problems, automated hybrid methods offer an efficient alternative to trial-and-error variance reduction techniques (e.g., geometry splitting or the stochastic weight window generator). The ADVANTG code has been developed to automate the generation of weight-windowmore » parameters for MCNP using the Consistent Adjoint Driven Importance Sampling method and employs the TORT or Denovo 3-D discrete ordinates codes to generate importance maps. In this paper, we describe the application of ADVANTG to a set of threat-detection simulations. We present numerical results for an 'active-interrogation' problem in which a standard cargo container is irradiated by a deuterium-tritium fusion neutron generator. We also present results for two passive detection problems in which a cargo container holding a shielded neutron or gamma source is placed near a portal monitor. For the passive detection problems, ADVANTG obtains an O(10{sup 4}) speedup and, for a detailed gamma spectrum tally, an average O(10{sup 2}) speedup relative to implicit-capture-only simulations, including the deterministic calculation time. For the active-interrogation problem, an O(10{sup 4}) speedup is obtained when compared to a simulation with angular source biasing and crude geometry splitting.« less

  10. Early Detection of Heart Failure Using Electronic Health Records: Practical Implications for Time Before Diagnosis, Data Diversity, Data Quantity, and Data Density.

    PubMed

    Ng, Kenney; Steinhubl, Steven R; deFilippi, Christopher; Dey, Sanjoy; Stewart, Walter F

    2016-11-01

    Using electronic health records data to predict events and onset of diseases is increasingly common. Relatively little is known, although, about the tradeoffs between data requirements and model utility. We examined the performance of machine learning models trained to detect prediagnostic heart failure in primary care patients using longitudinal electronic health records data. Model performance was assessed in relation to data requirements defined by the prediction window length (time before clinical diagnosis), the observation window length (duration of observation before prediction window), the number of different data domains (data diversity), the number of patient records in the training data set (data quantity), and the density of patient encounters (data density). A total of 1684 incident heart failure cases and 13 525 sex, age-category, and clinic matched controls were used for modeling. Model performance improved as (1) the prediction window length decreases, especially when <2 years; (2) the observation window length increases but then levels off after 2 years; (3) the training data set size increases but then levels off after 4000 patients; (4) more diverse data types are used, but, in order, the combination of diagnosis, medication order, and hospitalization data was most important; and (5) data were confined to patients who had ≥10 phone or face-to-face encounters in 2 years. These empirical findings suggest possible guidelines for the minimum amount and type of data needed to train effective disease onset predictive models using longitudinal electronic health records data. © 2016 American Heart Association, Inc.

  11. Windows NT Attacks for the Evaluation of Intrusion Detection Systems

    DTIC Science & Technology

    2000-06-01

    their passwords never expire. Their privileges allow telnet access and FTP access to the system, but do not allow local logins . Each user can...default: • Administrator: This root account allows remote and local logins and full control of system software. • Guest: This default account, setup by...realizing that the Netbus server was installed. The attack also edits the Windows NT Registry so the Netbus server restarts at every login . This

  12. The atypical excretion profile of meldonium: Comparison of urinary detection windows after single- and multiple-dose application in healthy volunteers.

    PubMed

    Görgens, Christian; Guddat, Sven; Bosse, Christina; Geyer, Hans; Pop, Valentin; Schänzer, Wilhelm; Thevis, Mario

    2017-05-10

    Following a one-year monitoring program providing unequivocal analytical evidence for a high prevalence in international elite sports, meldonium has been included in the World Anti-Doping Agency's (WADA) list of prohibited substances that came into effect on 1 January 2016. Despite of the polar and hydrophilic nature of the molecule, an unusual long detection window was observed in pilot elimination studies. Consequently, in the present study, urinary excretion profiles after single-dose (5 volunteers, 1×500mg) and multiple-dose oral application (5 volunteers; 2×500mg/day for 6days) were determined in order to facilitate the result management concerning meldonium findings in doping controls. Particularly the option to differentiate between recent use and tapering concentrations was studied. Urinary meldonium concentrations were determined using an analytical approach based on hydrophilic interaction liquid chromatography and high resolution tandem mass spectrometry. The study corroborates the hypothesis of a non-linear, dose-depended and biphasic excretion profile after oral application of meldonium and demonstrates that urinary detection windows are of considerable extent with up to 65 and 117days (concentrations>LOQ of 10ng/mL) following single- and multiple-dose applications, respectively. Copyright © 2017 Elsevier B.V. All rights reserved.

  13. Automatic Multi-sensor Data Quality Checking and Event Detection for Environmental Sensing

    NASA Astrophysics Data System (ADS)

    LIU, Q.; Zhang, Y.; Zhao, Y.; Gao, D.; Gallaher, D. W.; Lv, Q.; Shang, L.

    2017-12-01

    With the advances in sensing technologies, large-scale environmental sensing infrastructures are pervasively deployed to continuously collect data for various research and application fields, such as air quality study and weather condition monitoring. In such infrastructures, many sensor nodes are distributed in a specific area and each individual sensor node is capable of measuring several parameters (e.g., humidity, temperature, and pressure), providing massive data for natural event detection and analysis. However, due to the dynamics of the ambient environment, sensor data can be contaminated by errors or noise. Thus, data quality is still a primary concern for scientists before drawing any reliable scientific conclusions. To help researchers identify potential data quality issues and detect meaningful natural events, this work proposes a novel algorithm to automatically identify and rank anomalous time windows from multiple sensor data streams. More specifically, (1) the algorithm adaptively learns the characteristics of normal evolving time series and (2) models the spatial-temporal relationship among multiple sensor nodes to infer the anomaly likelihood of a time series window for a particular parameter in a sensor node. Case studies using different data sets are presented and the experimental results demonstrate that the proposed algorithm can effectively identify anomalous time windows, which may resulted from data quality issues and natural events.

  14. Sensitive determination of sulfonamides in environmental water by capillary electrophoresis coupled with both silvering detection window and in-capillary optical fiber light-emitting diode-induced fluorescence detector.

    PubMed

    Ji, Hongyun; Wu, Yu; Duan, Zhijuan; Yang, Feng; Yuan, Hongyan; Xiao, Dan

    2017-02-01

    A new detector, silvering detection window and in-capillary optical fiber light-emitting diode-induced fluorescence detector (SDW-ICOF-LED-IFD), is introduced for capillary electrophoresis (CE). The strategy of the work was that half surface of the detection window was coated with silver mirror, which could reflect the undetected fluorescence to the photomultiplier tube to be detected, consequently enhancing the detection sensitivity. Sulfonamides (SAs) are important antibiotics that achieved great applications in many fields. However, they pose a serious threat on the environment and human health when they enter into the environment. The SDW-ICOF-LED-IFD-CE system was used to determine fluorescein isothiocyanate (FITC)-labeled sulfadoxine (SDM), sulfaguanidine (SGD) and sulfamonomethoxine sodium (SMM-Na) in environmental water. The detection results obtained by the SDW-ICOF-LED-IFD-CE system were compared to those acquired by the CE with in-capillary optical fiber light-emitting diode-induced fluorescence detection (ICOF-LED-IFD-CE). The limits of detection (LODs) of SDW-ICOF-LED-IFD-CE and ICOF-LED-IFD-CE were 1.0-2.0 nM and 2.5-7.7 nM (S/N = 3), respectively. The intraday (n = 6) and interday (n = 6) precision of migration time and corresponding peak area for both types of CE were all less than 0.86% and 3.68%, respectively. The accuracy of the proposed method was judged by employing standard addition method, and recoveries obtained were in the range of 92.5-102.9%. The results indicated that the sensitivity of the SDW-ICOF-LED-IFD-CE system was improved, and that its reproducibility and accuracy were satisfactory. It was successfully applied to analyze SAs in environmental water. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  15. Polyphase-discrete Fourier transform spectrum analysis for the Search for Extraterrestrial Intelligence sky survey

    NASA Technical Reports Server (NTRS)

    Zimmerman, G. A.; Gulkis, S.

    1991-01-01

    The sensitivity of a matched filter-detection system to a finite-duration continuous wave (CW) tone is compared with the sensitivities of a windowed discrete Fourier transform (DFT) system and an ideal bandpass filter-bank system. These comparisons are made in the context of the NASA Search for Extraterrestrial Intelligence (SETI) microwave observing project (MOP) sky survey. A review of the theory of polyphase-DFT filter banks and its relationship to the well-known windowed-DFT process is presented. The polyphase-DFT system approximates the ideal bandpass filter bank by using as few as eight filter taps per polyphase branch. An improvement in sensitivity of approx. 3 dB over a windowed-DFT system can be obtained by using the polyphase-DFT approach. Sidelobe rejection of the polyphase-DFT system is vastly superior to the windowed-DFT system, thereby improving its performance in the presence of radio frequency interference (RFI).

  16. Measurement of the noise power spectrum in digital x-ray detectors

    NASA Astrophysics Data System (ADS)

    Aufrichtig, Richard; Su, Yu; Cheng, Yu; Granfors, Paul R.

    2001-06-01

    The noise power spectrum, NPS, is a key imaging property of a detector and one of the principle quantities needed to compute the detective quantum efficiency. NPS is measured by computing the Fourier transform of flat field images. Different measurement methods are investigated and evaluated with images obtained from an amorphous silicon flat panel x-ray imaging detector. First, the influence of fixed pattern structures is minimized by appropriate background corrections. For a given data set the effect of using different types of windowing functions is studied. Also different window sizes and amounts of overlap between windows are evaluated and compared to theoretical predictions. Results indicate that measurement error is minimized when applying overlapping Hanning windows on the raw data. Finally it is shown that radial averaging is a useful method of reducing the two-dimensional noise power spectrum to one dimension.

  17. Large-scale building scenes reconstruction from close-range images based on line and plane feature

    NASA Astrophysics Data System (ADS)

    Ding, Yi; Zhang, Jianqing

    2007-11-01

    Automatic generate 3D models of buildings and other man-made structures from images has become a topic of increasing importance, those models may be in applications such as virtual reality, entertainment industry and urban planning. In this paper we address the main problems and available solution for the generation of 3D models from terrestrial images. We first generate a coarse planar model of the principal scene planes and then reconstruct windows to refine the building models. There are several points of novelty: first we reconstruct the coarse wire frame model use the line segments matching with epipolar geometry constraint; Secondly, we detect the position of all windows in the image and reconstruct the windows by established corner points correspondences between images, then add the windows to the coarse model to refine the building models. The strategy is illustrated on image triple of college building.

  18. Oscillatory integration windows in neurons

    PubMed Central

    Gupta, Nitin; Singh, Swikriti Saran; Stopfer, Mark

    2016-01-01

    Oscillatory synchrony among neurons occurs in many species and brain areas, and has been proposed to help neural circuits process information. One hypothesis states that oscillatory input creates cyclic integration windows: specific times in each oscillatory cycle when postsynaptic neurons become especially responsive to inputs. With paired local field potential (LFP) and intracellular recordings and controlled stimulus manipulations we directly test this idea in the locust olfactory system. We find that inputs arriving in Kenyon cells (KCs) sum most effectively in a preferred window of the oscillation cycle. With a computational model, we show that the non-uniform structure of noise in the membrane potential helps mediate this process. Further experiments performed in vivo demonstrate that integration windows can form in the absence of inhibition and at a broad range of oscillation frequencies. Our results reveal how a fundamental coincidence-detection mechanism in a neural circuit functions to decode temporally organized spiking. PMID:27976720

  19. Using Signal Detection Theory and Time Window-based Human-In-The-Loop simulation as a tool for assessing the effectiveness of different qualitative shapes in continuous monitoring tasks.

    PubMed

    Kim, Jung Hyup; Rothrock, Ling; Laberge, Jason

    2014-05-01

    This paper provides a case study of Signal Detection Theory (SDT) as applied to a continuous monitoring dual-task environment. Specifically, SDT was used to evaluate the independent contributions of sensitivity and bias to different qualitative gauges used in process control. To assess detection performance in monitoring the gauges, we developed a Time Window-based Human-In-The-Loop (TWHITL) simulation bed. Through this test bed, we were able to generate a display similar to those monitored by console operators in oil and gas refinery plants. By using SDT and TWHITL, we evaluated the sensitivity, operator bias, and response time of flow, level, pressure, and temperature gauge shapes developed by Abnormal Situation Management(®) (ASM(®)) Consortium (www.asmconsortium.org). Our findings suggest that display density influences the effectiveness of participants in detecting abnormal shapes. Furthermore, results suggest that some shapes elicit better detection performance than others. Copyright © 2013 Elsevier Ltd and The Ergonomics Society. All rights reserved.

  20. Do territorial butterflies show a macroecological fighting pattern in response to environmental stability?

    PubMed

    Peixoto, Paulo Enrique Cardoso; Medina, Anderson Matos; Mendoza-Cuenca, Luis

    2014-11-01

    The territorial defense of mating sites by males should be favored when female monopolization is possible. Such monopolization should occur in species in which females emerge asynchronously, since males may have time to copulate with one female before the arrival of other. However, regions with smaller reproductive windows should promote higher synchronicity of female emergence, generating a predictable macroecological pattern associated to the rewards from territorial defense. In this study we evaluated the hypothesis that territorial male butterflies should invest more in fighting in species that occur in areas with stable climatic conditions that should present longer reproductive windows. We compiled studies reporting mean butterfly fighting times, mean trait differences among winners and losers and local Köppen climatic classification (a surrogate for climatic stability). We found that males from butterfly species located in areas with stable climatic conditions fight for longer times. However, although winners were stronger than intruders only in areas with intermediate climatic conditions, there was a marked variation among winner-loser comparisons in species in areas with stable climatic conditions. We conclude that males from butterfly species that occur in areas with stable climatic regimes invest more in fighting due to the higher payoffs accrued with territorial defense, but that such investment does not change the effect of trait asymmetries in settling territorial conflicts. This article is part of a Special Issue entitled: Special Issue:Neotropical Behaviour. Copyright © 2014 Elsevier B.V. All rights reserved.

  1. Using scan statistics for congenital anomalies surveillance: the EUROCAT methodology.

    PubMed

    Teljeur, Conor; Kelly, Alan; Loane, Maria; Densem, James; Dolk, Helen

    2015-11-01

    Scan statistics have been used extensively to identify temporal clusters of health events. We describe the temporal cluster detection methodology adopted by the EUROCAT (European Surveillance of Congenital Anomalies) monitoring system. Since 2001, EUROCAT has implemented variable window width scan statistic for detecting unusual temporal aggregations of congenital anomaly cases. The scan windows are based on numbers of cases rather than being defined by time. The methodology is imbedded in the EUROCAT Central Database for annual application to centrally held registry data. The methodology was incrementally adapted to improve the utility and to address statistical issues. Simulation exercises were used to determine the power of the methodology to identify periods of raised risk (of 1-18 months). In order to operationalize the scan methodology, a number of adaptations were needed, including: estimating date of conception as unit of time; deciding the maximum length (in time) and recency of clusters of interest; reporting of multiple and overlapping significant clusters; replacing the Monte Carlo simulation with a lookup table to reduce computation time; and placing a threshold on underlying population change and estimating the false positive rate by simulation. Exploration of power found that raised risk periods lasting 1 month are unlikely to be detected except when the relative risk and case counts are high. The variable window width scan statistic is a useful tool for the surveillance of congenital anomalies. Numerous adaptations have improved the utility of the original methodology in the context of temporal cluster detection in congenital anomalies.

  2. The method for detecting small lesions in medical image based on sliding window

    NASA Astrophysics Data System (ADS)

    Han, Guilai; Jiao, Yuan

    2016-10-01

    At present, the research on computer-aided diagnosis includes the sample image segmentation, extracting visual features, generating the classification model by learning, and according to the model generated to classify and judge the inspected images. However, this method has a large scale of calculation and speed is slow. And because medical images are usually low contrast, when the traditional image segmentation method is applied to the medical image, there is a complete failure. As soon as possible to find the region of interest, improve detection speed, this topic attempts to introduce the current popular visual attention model into small lesions detection. However, Itti model is mainly for natural images. But the effect is not ideal when it is used to medical images which usually are gray images. Especially in the early stages of some cancers, the focus of a disease in the whole image is not the most significant region and sometimes is very difficult to be found. But these lesions are prominent in the local areas. This paper proposes a visual attention mechanism based on sliding window, and use sliding window to calculate the significance of a local area. Combined with the characteristics of the lesion, select the features of gray, entropy, corner and edge to generate a saliency map. Then the significant region is segmented and distinguished. This method reduces the difficulty of image segmentation, and improves the detection accuracy of small lesions, and it has great significance to early discovery, early diagnosis and treatment of cancers.

  3. The effect of length and starting year on trend analyses of temperatures in Spanish mainland (1951-2010). Seasonal analyses: Autumn (V)

    NASA Astrophysics Data System (ADS)

    Salinas Solé, Celia; Peña Angulo, Dhais; Gonzalez HIgaldo, Jose Carlos; Brunetti, MIchele

    2017-04-01

    In this poster we applied the moving window approach (see Poster I of this collection) to analyze trends of autumn and its corresponding months (September, October, November) temperature mean values of maximum (Tmax) and minimum (Tmin) in Spanish mainland to detect the effects of length period and starting year. Monthly series belong to Monthly Temperature dataset of Spanish mainland (MOTEDAS). Database contains in its grid format of 5236 pixels of monthly series (10x10 km). The threshold used in spatial analyses considers 20% of land under significant trend (p<0.05). The most striking results are as follow: • Seasonal trend analyses of Autumn Tmax show no significance at any temporal Windows. Trends of Tmin are significant in more than 20% of land until 1974-2010. The area affected in Tmin progressively increase from SE to NW. • Monthly trend analyses not detect any significance in Tmax, while in Tmin, particularly in October, an extended area is detected in temporal windows in between 1951-2010 to 1978-2010, but clearly concentrated in the starting years of initial 70´s. Spatial pattern of areas affected significantly seems to be from SE to NW for October, and South-North in September. To conclude autumn trend analyses of Tmax and Tmin in Spanish mainland only detect significant trend in Tmin, mostly located in the 70´s and extending from SE to central areas of study area.

  4. Infrared small target detection based on multiscale center-surround contrast measure

    NASA Astrophysics Data System (ADS)

    Fu, Hao; Long, Yunli; Zhu, Ran; An, Wei

    2018-04-01

    Infrared(IR) small target detection plays a critical role in the Infrared Search And Track (IRST) system. Although it has been studied for years, there are some difficulties remained to the clutter environment. According to the principle of human discrimination of small targets from a natural scene that there is a signature of discontinuity between the object and its neighboring regions, we develop an efficient method for infrared small target detection called multiscale centersurround contrast measure (MCSCM). First, to determine the maximum neighboring window size, an entropy-based window selection technique is used. Then, we construct a novel multiscale center-surround contrast measure to calculate the saliency map. Compared with the original image, the MCSCM map has less background clutters and noise residual. Subsequently, a simple threshold is used to segment the target. Experimental results show our method achieves better performance.

  5. Dynamic detection of window starting positions and its implementation within an activity recognition framework.

    PubMed

    Ni, Qin; Patterson, Timothy; Cleland, Ian; Nugent, Chris

    2016-08-01

    Activity recognition is an intrinsic component of many pervasive computing and ambient intelligent solutions. This has been facilitated by an explosion of technological developments in the area of wireless sensor network, wearable and mobile computing. Yet, delivering robust activity recognition, which could be deployed at scale in a real world environment, still remains an active research challenge. Much of the existing literature to date has focused on applying machine learning techniques to pre-segmented data collected in controlled laboratory environments. Whilst this approach can provide valuable ground truth information from which to build recognition models, these techniques often do not function well when implemented in near real time applications. This paper presents the application of a multivariate online change detection algorithm to dynamically detect the starting position of windows for the purposes of activity recognition. Copyright © 2016 Elsevier Inc. All rights reserved.

  6. Locality-constrained anomaly detection for hyperspectral imagery

    NASA Astrophysics Data System (ADS)

    Liu, Jiabin; Li, Wei; Du, Qian; Liu, Kui

    2015-12-01

    Detecting a target with low-occurrence-probability from unknown background in a hyperspectral image, namely anomaly detection, is of practical significance. Reed-Xiaoli (RX) algorithm is considered as a classic anomaly detector, which calculates the Mahalanobis distance between local background and the pixel under test. Local RX, as an adaptive RX detector, employs a dual-window strategy to consider pixels within the frame between inner and outer windows as local background. However, the detector is sensitive if such a local region contains anomalous pixels (i.e., outliers). In this paper, a locality-constrained anomaly detector is proposed to remove outliers in the local background region before employing the RX algorithm. Specifically, a local linear representation is designed to exploit the internal relationship between linearly correlated pixels in the local background region and the pixel under test and its neighbors. Experimental results demonstrate that the proposed detector improves the original local RX algorithm.

  7. Research on Vehicle Temperature Regulation System Based on Air Convection Principle

    NASA Astrophysics Data System (ADS)

    Zhuge, Muzi; Li, Xiang; Liang, Caifeng

    2018-03-01

    The long time parking outdoors in the summer will lead to too high temperature in the car, and the harmful gas produced by the vehicle engine will stay in the confined space for a long time during the parking process, which will do great harm to the human body. If the air conditioning system is turned on before driving, the cooling rate is slow and the battery loss is large. To solve the above problems, we designed a temperature adjusting system based on the principle of air convection. We can choose the automatic mode or manual mode to achieve control of a convection window. In the automatic mode, the system will automatically detect the environmental temperature, through the sensor to complete the detection, and the signal is transmitted to the microcontroller to control the window open or close, in manual mode, the remote control of the window can be realized by Bluetooth. Therefore, the system has important practical significance to effectively regulate temperature, prolong battery life, and improve the safety and comfort of traffic vehicles.

  8. Detecting Hardware-assisted Hypervisor Rootkits within Nested Virtualized Environments

    DTIC Science & Technology

    2012-06-14

    least the minimum required for the guest OS and click “Next”. For 64-bit Windows 7 the minimum required is 2048 MB (Figure 66). Figure 66. Memory...prompted for Memory, allocate at least the minimum required for the guest OS, for 64-bit Windows 7 the minimum required is 2048 MB (Figure 79...130 21. Within the virtual disk creation wizard, select VDI for the file type (Figure 81). Figure 81. Select File Type 22. Select Dynamically

  9. Mid-infrared laser filaments in the atmosphere

    PubMed Central

    Mitrofanov, A. V.; Voronin, A. A.; Sidorov-Biryukov, D. A.; Pugžlys, A.; Stepanov, E. A.; Andriukaitis, G.; Flöry, T.; Ališauskas, S.; Fedotov, A. B.; Baltuška, A.; Zheltikov, A. M.

    2015-01-01

    Filamentation of ultrashort laser pulses in the atmosphere offers unique opportunities for long-range transmission of high-power laser radiation and standoff detection. With the critical power of self-focusing scaling as the laser wavelength squared, the quest for longer-wavelength drivers, which would radically increase the peak power and, hence, the laser energy in a single filament, has been ongoing over two decades, during which time the available laser sources limited filamentation experiments in the atmosphere to the near-infrared and visible ranges. Here, we demonstrate filamentation of ultrashort mid-infrared pulses in the atmosphere for the first time. We show that, with the spectrum of a femtosecond laser driver centered at 3.9 μm, right at the edge of the atmospheric transmission window, radiation energies above 20 mJ and peak powers in excess of 200 GW can be transmitted through the atmosphere in a single filament. Our studies reveal unique properties of mid-infrared filaments, where the generation of powerful mid-infrared supercontinuum is accompanied by unusual scenarios of optical harmonic generation, giving rise to remarkably broad radiation spectra, stretching from the visible to the mid-infrared. PMID:25687621

  10. Rhythm-based heartbeat duration normalization for atrial fibrillation detection.

    PubMed

    Islam, Md Saiful; Ammour, Nassim; Alajlan, Naif; Aboalsamh, Hatim

    2016-05-01

    Screening of atrial fibrillation (AF) for high-risk patients including all patients aged 65 years and older is important for prevention of risk of stroke. Different technologies such as modified blood pressure monitor, single lead ECG-based finger-probe, and smart phone using plethysmogram signal have been emerging for this purpose. All these technologies use irregularity of heartbeat duration as a feature for AF detection. We have investigated a normalization method of heartbeat duration for improved AF detection. AF is an arrhythmia in which heartbeat duration generally becomes irregularly irregular. From a window of heartbeat duration, we estimate the possible rhythm of the majority of heartbeats and normalize duration of all heartbeats in the window based on the rhythm so that we can measure the irregularity of heartbeats for both AF and non-AF rhythms in the same scale. Irregularity is measured by the entropy of distribution of the normalized duration. Then we classify a window of heartbeats as AF or non-AF by thresholding the measured irregularity. The effect of this normalization is evaluated by comparing AF detection performances using duration with the normalization, without normalization, and with other existing normalizations. Sensitivity and specificity of AF detection using normalized heartbeat duration were tested on two landmark databases available online and compared with results of other methods (with/without normalization) by receiver operating characteristic (ROC) curves. ROC analysis showed that the normalization was able to improve the performance of AF detection and it was consistent for a wide range of sensitivity and specificity for use of different thresholds. Detection accuracy was also computed for equal rates of sensitivity and specificity for different methods. Using normalized heartbeat duration, we obtained 96.38% accuracy which is more than 4% improvement compared to AF detection without normalization. The proposed normalization method was found useful for improving performance and robustness of AF detection. Incorporation of this method in a screening device could be crucial to reduce the risk of AF-related stroke. In general, the incorporation of the rhythm-based normalization in an AF detection method seems important for developing a robust AF screening device. Copyright © 2016 Elsevier Ltd. All rights reserved.

  11. Assimilation of total lightning data using the three-dimensional variational method at convection-allowing resolution

    NASA Astrophysics Data System (ADS)

    Zhang, Rong; Zhang, Yijun; Xu, Liangtao; Zheng, Dong; Yao, Wen

    2017-08-01

    A large number of observational analyses have shown that lightning data can be used to indicate areas of deep convection. It is important to assimilate observed lightning data into numerical models, so that more small-scale information can be incorporated to improve the quality of the initial condition and the subsequent forecasts. In this study, the empirical relationship between flash rate, water vapor mixing ratio, and graupel mixing ratio was used to adjust the model relative humidity, which was then assimilated by using the three-dimensional variational data assimilation system of the Weather Research and Forecasting model in cycling mode at 10-min intervals. To find the appropriate assimilation time-window length that yielded significant improvement in both the initial conditions and subsequent forecasts, four experiments with different assimilation time-window lengths were conducted for a squall line case that occurred on 10 July 2007 in North China. It was found that 60 min was the appropriate assimilation time-window length for this case, and longer assimilation window length was unnecessary since no further improvement was present. Forecasts of 1-h accumulated precipitation during the assimilation period and the subsequent 3-h accumulated precipitation were significantly improved compared with the control experiment without lightning data assimilation. The simulated reflectivity was optimal after 30 min of the forecast, it remained optimal during the following 42 min, and the positive effect from lightning data assimilation began to diminish after 72 min of the forecast. Overall, the improvement from lightning data assimilation can be maintained for about 3 h.

  12. Thermal/structural/optical integrated design for optical sensor mounted on unmanned aerial vehicle

    NASA Astrophysics Data System (ADS)

    Zhang, Gaopeng; Yang, Hongtao; Mei, Chao; Wu, Dengshan; Shi, Kui

    2016-01-01

    With the rapid development of science and technology and the promotion of many local wars in the world, altitude optical sensor mounted on unmanned aerial vehicle is more widely applied in the airborne remote sensing, measurement and detection. In order to obtain high quality image of the aero optical remote sensor, it is important to analysis its thermal-optical performance on the condition of high speed and high altitude. Especially for the key imaging assembly, such as optical window, the temperature variation and temperature gradient can result in defocus and aberrations in optical system, which will lead to the poor quality image. In order to improve the optical performance of a high speed aerial camera optical window, the thermal/structural/optical integrated design method is developed. Firstly, the flight environment of optical window is analyzed. Based on the theory of aerodynamics and heat transfer, the convection heat transfer coefficient is calculated. The temperature distributing of optical window is simulated by the finite element analysis software. The maximum difference in temperature of the inside and outside of optical window is obtained. Then the deformation of optical window under the boundary condition of the maximum difference in temperature is calculated. The optical window surface deformation is fitted in Zernike polynomial as the interface, the calculated Zernike fitting coefficients is brought in and analyzed by CodeV Optical Software. At last, the transfer function diagrams of the optical system on temperature field are comparatively analyzed. By comparing and analyzing the result, it can be obtained that the optical path difference caused by thermal deformation of the optical window is 138.2 nm, which is under PV ≤1 4λ . The above study can be used as an important reference for other optical window designs.

  13. Downsampling Photodetector Array with Windowing

    NASA Technical Reports Server (NTRS)

    Patawaran, Ferze D.; Farr, William H.; Nguyen, Danh H.; Quirk, Kevin J.; Sahasrabudhe, Adit

    2012-01-01

    In a photon counting detector array, each pixel in the array produces an electrical pulse when an incident photon on that pixel is detected. Detection and demodulation of an optical communication signal that modulated the intensity of the optical signal requires counting the number of photon arrivals over a given interval. As the size of photon counting photodetector arrays increases, parallel processing of all the pixels exceeds the resources available in current application-specific integrated circuit (ASIC) and gate array (GA) technology; the desire for a high fill factor in avalanche photodiode (APD) detector arrays also precludes this. Through the use of downsampling and windowing portions of the detector array, the processing is distributed between the ASIC and GA. This allows demodulation of the optical communication signal incident on a large photon counting detector array, as well as providing architecture amenable to algorithmic changes. The detector array readout ASIC functions as a parallel-to-serial converter, serializing the photodetector array output for subsequent processing. Additional downsampling functionality for each pixel is added to this ASIC. Due to the large number of pixels in the array, the readout time of the entire photodetector is greater than the time between photon arrivals; therefore, a downsampling pre-processing step is done in order to increase the time allowed for the readout to occur. Each pixel drives a small counter that is incremented at every detected photon arrival or, equivalently, the charge in a storage capacitor is incremented. At the end of a user-configurable counting period (calculated independently from the ASIC), the counters are sampled and cleared. This downsampled photon count information is then sent one counter word at a time to the GA. For a large array, processing even the downsampled pixel counts exceeds the capabilities of the GA. Windowing of the array, whereby several subsets of pixels are designated for processing, is used to further reduce the computational requirements. The grouping of the designated pixel frame as the photon count information is sent one word at a time to the GA, the aggregation of the pixels in a window can be achieved by selecting only the designated pixel counts from the serial stream of photon counts, thereby obviating the need to store the entire frame of pixel count in the gate array. The pixel count se quence from each window can then be processed, forming lower-rate pixel statistics for each window. By having this processing occur in the GA rather than in the ASIC, future changes to the processing algorithm can be readily implemented. The high-bandwidth requirements of a photon counting array combined with the properties of the optical modulation being detected by the array present a unique problem that has not been addressed by current CCD or CMOS sensor array solutions.

  14. Cross-modal integration of polyphonic characters in Chinese audio-visual sentences: a MVPA study based on functional connectivity.

    PubMed

    Zhang, Zhengyi; Zhang, Gaoyan; Zhang, Yuanyuan; Liu, Hong; Xu, Junhai; Liu, Baolin

    2017-12-01

    This study aimed to investigate the functional connectivity in the brain during the cross-modal integration of polyphonic characters in Chinese audio-visual sentences. The visual sentences were all semantically reasonable and the audible pronunciations of the polyphonic characters in corresponding sentences contexts varied in four conditions. To measure the functional connectivity, correlation, coherence and phase synchronization index (PSI) were used, and then multivariate pattern analysis was performed to detect the consensus functional connectivity patterns. These analyses were confined in the time windows of three event-related potential components of P200, N400 and late positive shift (LPS) to investigate the dynamic changes of the connectivity patterns at different cognitive stages. We found that when differentiating the polyphonic characters with abnormal pronunciations from that with the appreciate ones in audio-visual sentences, significant classification results were obtained based on the coherence in the time window of the P200 component, the correlation in the time window of the N400 component and the coherence and PSI in the time window the LPS component. Moreover, the spatial distributions in these time windows were also different, with the recruitment of frontal sites in the time window of the P200 component, the frontal-central-parietal regions in the time window of the N400 component and the central-parietal sites in the time window of the LPS component. These findings demonstrate that the functional interaction mechanisms are different at different stages of audio-visual integration of polyphonic characters.

  15. Stability of Stellar Periods in the Hyades and Taurus

    NASA Astrophysics Data System (ADS)

    Rebull, Luisa M.; Stauffer, John R.; K2 Clusters Team

    2018-06-01

    K2 has opened to us the study of high-precision light curves from which we can derive stellar rotation periods. We have presented period distributions for the Pleiades, Praesepe, Upper Sco and Rho Oph. But, how stable are the periods we are deriving from them? Early ground-based work in Orion (Rebull 2001) suggested that, for the youngest stars, about half the stars had sufficiently different spot distributions in two consecutive years such that periods could not be recovered in the second year. However, now that we have K2, precision and diurnal windowing functions are no longer really much of a concern. For a handful of stars in Hyades and Taurus, the K2 spacecraft monitored them for two non-consecutive 70d windows (campaigns 4, 2015 Feb and 13, 2017 Mar). In this poster, we examine whether or not the light curves are similar in the two epochs, and how accurately the same period can be recovered.

  16. The trading time risks of stock investment in stock price drop

    NASA Astrophysics Data System (ADS)

    Li, Jiang-Cheng; Tang, Nian-Sheng; Mei, Dong-Cheng; Li, Yun-Xian; Zhang, Wan

    2016-11-01

    This article investigates the trading time risk (TTR) of stock investment in the case of stock price drop of Dow Jones Industrial Average (ˆDJI) and Hushen300 data (CSI300), respectively. The escape time of stock price from the maximum to minimum in a data window length (DWL) is employed to measure the absolute TTR, the ratio of the escape time to data window length is defined as the relative TTR. Empirical probability density functions of the absolute and relative TTRs for the ˆDJI and CSI300 data evidence that (i) whenever the DWL increases, the absolute TTR increases, the relative TTR decreases otherwise; (ii) there is the monotonicity (or non-monotonicity) for the stability of the absolute (or relative) TTR; (iii) there is a peak distribution for shorter trading days and a two-peak distribution for longer trading days for the PDF of ratio; (iv) the trading days play an opposite role on the absolute (or relative) TTR and its stability between ˆDJI and CSI300 data.

  17. Epi info - present and future.

    PubMed

    Su, Y; Yoon, S S

    2003-01-01

    Epi Info is a suite of public domain computer programs for public health professionals developed by the Centers for Disease Control and Prevention (CDC). Epi Info is used for rapid questionnaire design, data entry and validation, data analysis including mapping and graphing, and creation of reports. Epi Info was originally created in 1985 using Turbo Pascal. In 1998, the last version of Epi Info for DOS, version 6, was released. Epi Info for DOS is currently supported by CDC but is no longer updated. The current version, Epi Info 2002, is Windows-based software developed using Microsoft Visual Basic. Approximately 300,000 downloads of Epi Info software occurred in 2002 from approximately 130 countries. These numbers make Epi Info probably one of the most widely distributed and used public domain programs in the world. The DOS version of Epi Info was translated into 13 languages, and efforts are underway to translate the Windows version into other major languages. Versions already exist for Spanish, French, Portuguese, Chinese, Japanese, and Arabic.

  18. Ambient-Pressure X-ray Photoelectron Spectroscopy to Characterize the Solid/Liquid Interface: Probing the Electrochemical Double Layer

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Favaro, Marco; Liu, Zhi; Crumlin, Ethan J.

    Ambient-pressure X-ray photoelectron spectroscopy (APXPS) has contributed greatly to a wide range of research fields, including environmental science, catalysis, and electrochemistry, to name a few. The use of this technique at synchrotron facilities primarily focused on probing the solid/gas interface; however, it quickly advanced to the probing of liquid/vapor interfaces and solid/liquid interfaces through an X-ray-transparent window. Most recently, combining APXPS with “Tender” X-rays (~2.5 keV to 8 keV) on beamline 9.3.1 at the Advanced Light Source in Lawrence Berkeley National Laboratory (which can generate photoelectrons with much longer inelastic mean free paths) has enabled us to probe the solid/liquidmore » interface without needing a window. This innovation allows us to probe interfacial chemistries of electrochemically controlled solid/liquid interfaces undergoing charge transfer reactions. Lastly, these advancements have transitioned APXPS from a traditional surface science tool to an essential interface science technique.« less

  19. Implicit co-activation of American Sign Language in deaf readers: An ERP study.

    PubMed

    Meade, Gabriela; Midgley, Katherine J; Sevcikova Sehyr, Zed; Holcomb, Phillip J; Emmorey, Karen

    2017-07-01

    In an implicit phonological priming paradigm, deaf bimodal bilinguals made semantic relatedness decisions for pairs of English words. Half of the semantically unrelated pairs had phonologically related translations in American Sign Language (ASL). As in previous studies with unimodal bilinguals, targets in pairs with phonologically related translations elicited smaller negativities than targets in pairs with phonologically unrelated translations within the N400 window. This suggests that the same lexicosemantic mechanism underlies implicit co-activation of a non-target language, irrespective of language modality. In contrast to unimodal bilingual studies that find no behavioral effects, we observed phonological interference, indicating that bimodal bilinguals may not suppress the non-target language as robustly. Further, there was a subset of bilinguals who were aware of the ASL manipulation (determined by debrief), and they exhibited an effect of ASL phonology in a later time window (700-900ms). Overall, these results indicate modality-independent language co-activation that persists longer for bimodal bilinguals. Copyright © 2017 Elsevier Inc. All rights reserved.

  20. Measurement of Vehicle Air Conditioning Pull-Down Period

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Thomas, John F.; Huff, Shean P.; Moore, Larry G.

    2016-08-01

    Air conditioner usage was characterized for high heat-load summer conditions during short driving trips using a 2009 Ford Explorer and a 2009 Toyota Corolla. Vehicles were parked in the sun with windows closed to allow the cabin to become hot. Experiments were conducted by entering the instrumented vehicles in this heated condition and driving on-road with the windows up and the air conditioning set to maximum cooling, maximum fan speed and the air flow setting to recirculate cabin air rather than pull in outside humid air. The main purpose was to determine the length of time the air conditioner systemmore » would remain at or very near maximum cooling power under these severe-duty conditions. Because of the variable and somewhat uncontrolled nature of the experiments, they serve only to show that for short vehicle trips, air conditioning can remain near or at full cooling capacity for 10-minutes or significantly longer and the cabin may be uncomfortably warm during much of this time.« less

  1. Optimization of confocal laser induced fluorescence for long focal length applications

    NASA Astrophysics Data System (ADS)

    Jemiolo, Andrew J.; Henriquez, Miguel F.; Thompson, Derek S.; Scime, Earl E.

    2017-10-01

    Laser induced fluorescence (LIF) is a non-perturbative diagnostic for measuring ion and neutral particle velocities and temperatures in a plasma. The conventional method for single-photon LIF requires intersecting optical paths for light injection and collection. The multiple vacuum windows needed for such measurements are unavailable in many plasma experiments. Confocal LIF eliminates the need for perpendicular intersecting optical paths by using concentric injection and collection paths through a single window. One of the main challenges with using confocal LIF is achieving high resolution measurements at the longer focal lengths needed for many plasma experiments. We present confocal LIF measurements in HELIX, a helicon plasma experiment at West Virginia University, demonstrating spatial resolution dependence on focal length and spatial filtering. By combining aberration mitigating optics with spatial filtering, our results show high resolution measurements at focal lengths of 0.5 m, long enough to access the interiors of many laboratory plasma experiments. This work was supported by U.S. National Science Foundation Grant No. PHY-1360278.

  2. Mechanical diagnosis of human erythrocytes by ultra-high speed manipulation unraveled critical time window for global cytoskeletal remodeling

    NASA Astrophysics Data System (ADS)

    Ito, Hiroaki; Murakami, Ryo; Sakuma, Shinya; Tsai, Chia-Hung Dylan; Gutsmann, Thomas; Brandenburg, Klaus; Pöschl, Johannes M. B.; Arai, Fumihito; Kaneko, Makoto; Tanaka, Motomu

    2017-02-01

    Large deformability of erythrocytes in microvasculature is a prerequisite to realize smooth circulation. We develop a novel tool for the three-step “Catch-Load-Launch” manipulation of a human erythrocyte based on an ultra-high speed position control by a microfluidic “robotic pump”. Quantification of the erythrocyte shape recovery as a function of loading time uncovered the critical time window for the transition between fast and slow recoveries. The comparison with erythrocytes under depletion of adenosine triphosphate revealed that the cytoskeletal remodeling over a whole cell occurs in 3 orders of magnitude longer timescale than the local dissociation-reassociation of a single spectrin node. Finally, we modeled septic conditions by incubating erythrocytes with endotoxin, and found that the exposure to endotoxin results in a significant delay in the characteristic transition time for cytoskeletal remodeling. The high speed manipulation of erythrocytes with a robotic pump technique allows for high throughput mechanical diagnosis of blood-related diseases.

  3. Ambient-Pressure X-ray Photoelectron Spectroscopy to Characterize the Solid/Liquid Interface: Probing the Electrochemical Double Layer

    DOE PAGES

    Favaro, Marco; Liu, Zhi; Crumlin, Ethan J.

    2017-03-31

    Ambient-pressure X-ray photoelectron spectroscopy (APXPS) has contributed greatly to a wide range of research fields, including environmental science, catalysis, and electrochemistry, to name a few. The use of this technique at synchrotron facilities primarily focused on probing the solid/gas interface; however, it quickly advanced to the probing of liquid/vapor interfaces and solid/liquid interfaces through an X-ray-transparent window. Most recently, combining APXPS with “Tender” X-rays (~2.5 keV to 8 keV) on beamline 9.3.1 at the Advanced Light Source in Lawrence Berkeley National Laboratory (which can generate photoelectrons with much longer inelastic mean free paths) has enabled us to probe the solid/liquidmore » interface without needing a window. This innovation allows us to probe interfacial chemistries of electrochemically controlled solid/liquid interfaces undergoing charge transfer reactions. Lastly, these advancements have transitioned APXPS from a traditional surface science tool to an essential interface science technique.« less

  4. Phenology-based, remote sensing of post-burn disturbance windows in rangelands

    USGS Publications Warehouse

    Sankeya, Joel B.; Wallace, Cynthia S.A.; Ravi, Sujith

    2013-01-01

    Wildland fire activity has increased in many parts of the world in recent decades. Ecological disturbance by fire can accelerate ecosystem degradation processes such as erosion due to combustion of vegetation that otherwise provides protective cover to the soil surface. This study employed a novel ecological indicator based on remote sensing of vegetation greenness dynamics (phenology) to estimate variability in the window of time between fire and the reemergence of green vegetation. The indicator was applied as a proxy for short-term, post-fire disturbance windows in rangelands; where a disturbance window is defined as the time required for an ecological or geomorphic process that is altered to return to pre-disturbance levels. We examined variability in the indicator determined for time series of MODIS and AVHRR NDVI remote sensing data for a database of ∼100 historical wildland fires, with associated post-fire reseeding treatments, that burned 1990–2003 in cold desert shrub steppe of the Great Basin and Columbia Plateau of the western USA. The indicator-based estimates of disturbance window length were examined relative to the day of the year that fires burned and seeding treatments to consider effects of contemporary variability in fire regime and management activities in this environment. A key finding was that contemporary changes of increased length of the annual fire season could have indirect effects on ecosystem degradation, as early season fires appeared to result in longer time that soils remained relatively bare of the protective cover of vegetation after fires. Also important was that reemergence of vegetation did not occur more quickly after fire in sites treated with post-fire seeding, which is a strategy commonly employed to accelerate post-fire vegetation recovery and stabilize soil. Future work with the indicator could examine other ecological factors that are dynamic in space and time following disturbance – such as nutrient cycling, carbon storage, microbial community composition, or soil hydrology – as a function of disturbance windows, possibly using simulation modeling and historical wildfire information.

  5. Freezing of Gait Detection in Parkinson's Disease: A Subject-Independent Detector Using Anomaly Scores.

    PubMed

    Pham, Thuy T; Moore, Steven T; Lewis, Simon John Geoffrey; Nguyen, Diep N; Dutkiewicz, Eryk; Fuglevand, Andrew J; McEwan, Alistair L; Leong, Philip H W

    2017-11-01

    Freezing of gait (FoG) is common in Parkinsonian gait and strongly relates to falls. Current clinical FoG assessments are patients' self-report diaries and experts' manual video analysis. Both are subjective and yield moderate reliability. Existing detection algorithms have been predominantly designed in subject-dependent settings. In this paper, we aim to develop an automated FoG detector for subject independent. After extracting highly relevant features, we apply anomaly detection techniques to detect FoG events. Specifically, feature selection is performed using correlation and clusterability metrics. From a list of 244 feature candidates, 36 candidates were selected using saliency and robustness criteria. We develop an anomaly score detector with adaptive thresholding to identify FoG events. Then, using accuracy metrics, we reduce the feature list to seven candidates. Our novel multichannel freezing index was the most selective across all window sizes, achieving sensitivity (specificity) of (). On the other hand, freezing index from the vertical axis was the best choice for a single input, achieving sensitivity (specificity) of () for ankle and () for back sensors. Our subject-independent method is not only significantly more accurate than those previously reported, but also uses a much smaller window (e.g., versus ) and/or lower tolerance (e.g., versus ).Freezing of gait (FoG) is common in Parkinsonian gait and strongly relates to falls. Current clinical FoG assessments are patients' self-report diaries and experts' manual video analysis. Both are subjective and yield moderate reliability. Existing detection algorithms have been predominantly designed in subject-dependent settings. In this paper, we aim to develop an automated FoG detector for subject independent. After extracting highly relevant features, we apply anomaly detection techniques to detect FoG events. Specifically, feature selection is performed using correlation and clusterability metrics. From a list of 244 feature candidates, 36 candidates were selected using saliency and robustness criteria. We develop an anomaly score detector with adaptive thresholding to identify FoG events. Then, using accuracy metrics, we reduce the feature list to seven candidates. Our novel multichannel freezing index was the most selective across all window sizes, achieving sensitivity (specificity) of (). On the other hand, freezing index from the vertical axis was the best choice for a single input, achieving sensitivity (specificity) of () for ankle and () for back sensors. Our subject-independent method is not only significantly more accurate than those previously reported, but also uses a much smaller window (e.g., versus ) and/or lower tolerance (e.g., versus ).

  6. Integral window/photon beam position monitor and beam flux detectors for x-ray beams

    DOEpatents

    Shu, Deming; Kuzay, Tuncer M.

    1995-01-01

    A monitor/detector assembly in a synchrotron for either monitoring the position of a photon beam or detecting beam flux may additionally function as a vacuum barrier between the front end and downstream segment of the beamline in the synchrotron. A base flange of the monitor/detector assembly is formed of oxygen free copper with a central opening covered by a window foil that is fused thereon. The window foil is made of man-made materials, such as chemical vapor deposition diamond or cubic boron nitrate and in certain configurations includes a central opening through which the beams are transmitted. Sensors of low atomic number materials, such as aluminum or beryllium, are laid on the window foil. The configuration of the sensors on the window foil may be varied depending on the function to be performed. A contact plate of insulating material, such as aluminum oxide, is secured to the base flange and is thereby clamped against the sensor on the window foil. The sensor is coupled to external electronic signal processing devices via a gold or silver lead printed onto the contact plate and a copper post screw or alternatively via a copper screw and a copper spring that can be inserted through the contact plate and coupled to the sensors. In an alternate embodiment of the monitor/detector assembly, the sensors are sandwiched between the window foil of chemical vapor deposition diamond or cubic boron nitrate and a front foil made of similar material.

  7. Ultrasound window-modulated compounding Nakagami imaging: Resolution improvement and computational acceleration for liver characterization.

    PubMed

    Ma, Hsiang-Yang; Lin, Ying-Hsiu; Wang, Chiao-Yin; Chen, Chiung-Nien; Ho, Ming-Chih; Tsui, Po-Hsiang

    2016-08-01

    Ultrasound Nakagami imaging is an attractive method for visualizing changes in envelope statistics. Window-modulated compounding (WMC) Nakagami imaging was reported to improve image smoothness. The sliding window technique is typically used for constructing ultrasound parametric and Nakagami images. Using a large window overlap ratio may improve the WMC Nakagami image resolution but reduces computational efficiency. Therefore, the objectives of this study include: (i) exploring the effects of the window overlap ratio on the resolution and smoothness of WMC Nakagami images; (ii) proposing a fast algorithm that is based on the convolution operator (FACO) to accelerate WMC Nakagami imaging. Computer simulations and preliminary clinical tests on liver fibrosis samples (n=48) were performed to validate the FACO-based WMC Nakagami imaging. The results demonstrated that the width of the autocorrelation function and the parameter distribution of the WMC Nakagami image reduce with the increase in the window overlap ratio. One-pixel shifting (i.e., sliding the window on the image data in steps of one pixel for parametric imaging) as the maximum overlap ratio significantly improves the WMC Nakagami image quality. Concurrently, the proposed FACO method combined with a computational platform that optimizes the matrix computation can accelerate WMC Nakagami imaging, allowing the detection of liver fibrosis-induced changes in envelope statistics. FACO-accelerated WMC Nakagami imaging is a new-generation Nakagami imaging technique with an improved image quality and fast computation. Copyright © 2016 Elsevier B.V. All rights reserved.

  8. Windowing technique in FM radar realized by FPGA for better target resolution

    NASA Astrophysics Data System (ADS)

    Ponomaryov, Volodymyr I.; Escamilla-Hernandez, Enrique; Kravchenko, Victor F.

    2006-09-01

    Remote sensing systems, such as SAR usually apply FM signals to resolve nearly placed targets (objects) and improve SNR. Main drawbacks in the pulse compression of FM radar signal that it can add the range side-lobes in reflectivity measurements. Using weighting window processing in time domain it is possible to decrease significantly the side-lobe level (SLL) of output radar signal that permits to resolve small or low power targets those are masked by powerful ones. There are usually used classical windows such as Hamming, Hanning, Blackman-Harris, Kaiser-Bessel, Dolph-Chebyshev, Gauss, etc. in window processing. Additionally to classical ones in here we also use a novel class of windows based on atomic functions (AF) theory. For comparison of simulation and experimental results we applied the standard parameters, such as coefficient of amplification, maximum level of side-lobe, width of main lobe, etc. In this paper we also proposed to implement the compression-windowing model on a hardware level employing Field Programmable Gate Array (FPGA) that offers some benefits like instantaneous implementation, dynamic reconfiguration, design, and field programmability. It has been investigated the pulse compression design on FPGA applying classical and novel window technique to reduce the SLL in absence and presence of noise. The paper presents simulated and experimental examples of detection of small or nearly placed targets in the imaging radar. Paper also presents the experimental hardware results of windowing in FM radar demonstrating resolution of the several targets for classical rectangular, Hamming, Kaiser-Bessel, and some novel ones: Up(x), fup 4(x)•D 3(x), fup 6(x)•G 3(x), etc. It is possible to conclude that windows created on base of the AFs offer better decreasing of the SLL in cases of presence or absence of noise and when we move away of the main lobe in comparison with classical windows.

  9. Parvovirus Infection Is Associated With Myocarditis and Myocardial Fibrosis in Young Dogs.

    PubMed

    Ford, Jordan; McEndaffer, Laura; Renshaw, Randall; Molesan, Alex; Kelly, Kathleen

    2017-11-01

    Perinatal parvoviral infection causes necrotizing myocarditis in puppies, which results in acute high mortality or progressive cardiac injury. While widespread vaccination has dramatically curtailed the epidemic of canine parvoviral myocarditis, we hypothesized that canine parvovirus 2 (CPV-2) myocardial infection is an underrecognized cause of myocarditis, cardiac damage, and/or repair by fibrosis in young dogs. In this retrospective study, DNA was extracted from formalin-fixed, paraffin-embedded tissues from 40 cases and 41 control dogs under 2 years of age from 2007 to 2015. Cases had a diagnosis of myocardial necrosis, inflammation, or fibrosis, while age-matched controls lacked myocardial lesions. Conventional polymerase chain reaction (PCR) and sequencing targeting the VP1 to VP2 region detected CPV-2 in 12 of 40 cases (30%; 95% confidence interval [CI], 18%-45%) and 2 of 41 controls (5%; 95% CI, 0.1%-16%). Detection of CPV-2 DNA in the myocardium was significantly associated with myocardial lesions ( P = .003). Reverse transcription quantitative PCR amplifying VP2 identified viral messenger RNA in 12 of 12 PCR-positive cases and 2 of 2 controls. PCR results were confirmed by in situ hybridization, which identified parvoviral DNA in cardiomyocytes and occasionally macrophages of juvenile and young adult dogs (median age 61 days). Myocardial CPV-2 was identified in juveniles with minimal myocarditis and CPV-2 enteritis, which may indicate a longer window of cardiac susceptibility to myocarditis than previously reported. CPV-2 was also detected in dogs with severe myocardial fibrosis with in situ hybridization signal localized to cardiomyocytes, suggesting prior myocardial damage by CPV-2. Despite the frequency of vaccination, these findings suggest that CPV-2 remains an important cause of myocardial damage in dogs.

  10. Escaping blood-fed malaria mosquitoes minimize tactile detection without compromising on take-off speed.

    PubMed

    Muijres, F T; Chang, S W; van Veen, W G; Spitzen, J; Biemans, B T; Koehl, M A R; Dudley, R

    2017-10-15

    To escape after taking a blood meal, a mosquito must exert forces sufficiently high to take off when carrying a load roughly equal to its body weight, while simultaneously avoiding detection by minimizing tactile signals exerted on the host's skin. We studied this trade-off between escape speed and stealth in the malaria mosquito Anopheles coluzzii using 3D motion analysis of high-speed stereoscopic videos of mosquito take-offs and aerodynamic modeling. We found that during the push-off phase, mosquitoes enhanced take-off speed using aerodynamic forces generated by the beating wings in addition to leg-based push-off forces, whereby wing forces contributed 61% of the total push-off force. Exchanging leg-derived push-off forces for wing-derived aerodynamic forces allows the animal to reduce peak force production on the host's skin. By slowly extending their long legs throughout the push-off, mosquitoes spread push-off forces over a longer time window than insects with short legs, thereby further reducing peak leg forces. Using this specialized take-off behavior, mosquitoes are capable of reaching take-off speeds comparable to those of similarly sized fruit flies, but with weight-normalized peak leg forces that were only 27% of those of the fruit flies. By limiting peak leg forces, mosquitoes possibly reduce the chance of being detected by the host. The resulting combination of high take-off speed and low tactile signals on the host might help increase the mosquito's success in escaping from blood-hosts, which consequently also increases the chance of transmitting vector-borne diseases, such as malaria, to future hosts. © 2017. Published by The Company of Biologists Ltd.

  11. Evolution of the f-mode instability in neutron stars and gravitational wave detectability

    NASA Astrophysics Data System (ADS)

    Passamonti, A.; Gaertig, E.; Kokkotas, K. D.; Doneva, D.

    2013-04-01

    We study the dynamical evolution of the gravitational-wave driven instability of the f mode in rapidly rotating relativistic stars. With an approach based on linear perturbation theory we describe the evolution of the mode amplitude and follow the trajectory of a newborn neutron star through its instability window. The influence on the f-mode instability of the magnetic field and the presence of an unstable r mode is also considered. Two different configurations are studied in more detail, an N=1 polytrope with a typical mass and radius and a more massive polytropic N=0.62 model with gravitational mass M=1.98M⊙. We study several evolutions with different initial rotation rates and temperature and determine the gravitational waves radiated during the instability. In more massive models, an unstable f mode with a saturation energy of about 10-6M⊙c2 may generate a gravitational wave signal which can be detected by the Advanced LIGO/Virgo detector from the Virgo cluster. The magnetic field affects the evolution and then the detectability of the gravitational radiation when its strength is higher than 1012G, while the effects of an unstable r mode become dominant when this mode reaches the maximum saturation value allowed by nonlinear mode couplings. However, the relative saturation amplitude of the f and r modes must be known more accurately in order to provide a definitive answer to this issue. From the thermal evolution we find also that the heat generated by shear viscosity during the saturation phase completely balances the neutrinos’ cooling and prevents the star from entering the regime of mutual friction. The evolution time of the instability is therefore longer and the star loses significantly larger amounts of angular momentum via gravitational waves.

  12. E/N effects on K0 values revealed by high precision measurements under low field conditions

    NASA Astrophysics Data System (ADS)

    Hauck, Brian C.; Siems, William F.; Harden, Charles S.; McHugh, Vincent M.; Hill, Herbert H.

    2016-07-01

    Ion mobility spectrometry (IMS) is used to detect chemical warfare agents, explosives, and narcotics. While IMS has a low rate of false positives, their occurrence causes the loss of time and money as the alarm is verified. Because numerous variables affect the reduced mobility (K0) of an ion, wide detection windows are required in order to ensure a low false negative response rate. Wide detection windows, however, reduce response selectivity, and interferents with similar K0 values may be mistaken for targeted compounds and trigger a false positive alarm. Detection windows could be narrowed if reference K0 values were accurately known for specific instrumental conditions. Unfortunately, there is a lack of confidence in the literature values due to discrepancies in the reported K0 values and their lack of reported error. This creates the need for the accurate control and measurement of each variable affecting ion mobility, as well as for a central accurate IMS database for reference and calibration. A new ion mobility spectrometer has been built that reduces the error of measurements affecting K0 by an order of magnitude less than ±0.2%. Precise measurements of ±0.002 cm2 V-1 s-1 or better have been produced and, as a result, an unexpected relationship between K0 and the electric field to number density ratio (E/N) has been discovered in which the K0 values of ions decreased as a function of E/N along a second degree polynomial trend line towards an apparent asymptote at approximately 4 Td.

  13. Brominated flame retardants in the indoor environment - Comparative study of indoor contamination from three countries.

    PubMed

    Venier, Marta; Audy, Ondřej; Vojta, Šimon; Bečanová, Jitka; Romanak, Kevin; Melymuk, Lisa; Krátká, Martina; Kukučka, Petr; Okeme, Joseph; Saini, Amandeep; Diamond, Miriam L; Klánová, Jana

    2016-09-01

    Concentrations of more than 20 brominated flame retardants (FRs), including polybrominated diphenyl ethers (PBDEs) and emerging FRs, were measured in air, dust and window wipes from 63 homes in Canada, the Czech Republic and the United States in the spring and summer of 2013. Among the PBDEs, the highest concentrations were generally BDE-209 in all three matrices, followed by Penta-BDEs. Among alternative FRs, EHTBB and BEHTBP were detected at the highest concentrations. DBDPE was also a major alternative FR detected in dust and air. Bromobenzenes were detected at lower levels than PBDEs and other alternative FRs; among the bromobenzenes, HBB and PBEB were the most abundant compounds. In general, FR levels were highest in the US and lowest in the Czech Republic - a geographic trend that reflects the flame retardants' market. No statistically significant differences were detected between bedroom and living room FR concentrations in the same house (n=10), suggesting that sources of FRs are widespread indoors and mixing between rooms. The concentrations of FRs in air, dust, and window film were significantly correlated, especially for PBDEs. We found a significant relationship between the concentrations in dust and window film and in the gas phase for FRs with log KOA values <14, suggesting that equilibrium was reached for these but not compounds with log KOA values >14. This hypothesis was confirmed by a large discrepancy between values predicted using a partitioning model and the measured values for FRs with log KOA values >14. Copyright © 2016 Elsevier Ltd. All rights reserved.

  14. Magnetic biosensor using a high transition temperature SQUID

    NASA Astrophysics Data System (ADS)

    Grossman, Helene Lila

    A high transition temperature (Tc) Superconducting QUantum Interference Device (SQUID) is used to detect magnetically-labeled microorganisms. The targets are identified and quantified by means of magnetic relaxation measurements, with no need for unbound magnetic labels to be washed away. The binding rate between antibody-linked magnetic particles and targets can be measured with this technique. Installed in a "SQUID microscope," a YBa2Cu 3O7-delta SQUID is mounted on a sapphire rod thermally linked to a liquid nitrogen can; these components are enclosed in a fiberglass vacuum chamber. A thin window separates the vacuum chamber from the sample, which is at room temperature and atmospheric pressure. In one mode of the experiment, targets are immobilized on a substrate and immersed a suspension of ˜50 nm diameter superparamagnetic particles, coated with antibodies. A pulsed magnetic field aligns the magnetic dipole moments, and the SQUID measures the magnetic relaxation signal each time the field is turned off. Unbound particles relax within ˜50 mus by Brownian rotation, too fast for the SQUID system to measure. In contrast, particles bound to targets have their Brownian motion inhibited. These particles relax in ˜1 s by rotation of the internal dipole moment, and this Neel relaxation process is detected by the SQUID. This assay is demonstrated with a model system of liposomes carrying the FLAG epitope; the detection limit is (2.7 +/- 0.2) x 105 particles. The replacement of the SQUID with a gradiometer improves the detection limit to (7.0 +/- 0.7) x 103 particles. In an alternate mode of the experiment, freely suspended targets (larger than ˜1 mum diameter) are detected. Since the Brownian relaxation time of the targets is longer than the measurement time, particles bound to targets are effectively immobilized and exhibit Neel relaxation. Listeria monocytogenes are detected using this method; the sensitivity is (1.1 +/- 0.2) x 105 bacteria in 20 muL. For a 1 nL sample volume, the detection limit is expected to be 230 +/- 40 bacteria. Time-resolved measurements, which yield the binding rate between particles and bacteria, are reported. Also, potential improvements to the system and possible applications are discussed.

  15. Detection and characterization of pulses in broadband seismometers

    USGS Publications Warehouse

    Wilson, David; Ringler, Adam; Hutt, Charles R.

    2017-01-01

    Pulsing - caused either by mechanical or electrical glitches, or by microtilt local to a seismometer - can significantly compromise the long‐period noise performance of broadband seismometers. High‐fidelity long‐period recordings are needed for accurate calculation of quantities such as moment tensors, fault‐slip models, and normal‐mode measurements. Such pulses have long been recognized in accelerometers, and methods have been developed to correct these acceleration steps, but considerable work remains to be done in order to detect and correct similar pulses in broadband seismic data. We present a method for detecting and characterizing the pulses using data from a range of broadband sensor types installed in the Global Seismographic Network. The technique relies on accurate instrument response removal and employs a moving‐window approach looking for acceleration baseline shifts. We find that pulses are present at varying levels in all sensor types studied. Pulse‐detection results compared with average daily station noise values are consistent with predicted noise levels of acceleration steps. This indicates that we can calculate maximum pulse amplitude allowed per time window that would be acceptable without compromising long‐period data analysis.

  16. Detection of Splice Sites Using Support Vector Machine

    NASA Astrophysics Data System (ADS)

    Varadwaj, Pritish; Purohit, Neetesh; Arora, Bhumika

    Automatic identification and annotation of exon and intron region of gene, from DNA sequences has been an important research area in field of computational biology. Several approaches viz. Hidden Markov Model (HMM), Artificial Intelligence (AI) based machine learning and Digital Signal Processing (DSP) techniques have extensively and independently been used by various researchers to cater this challenging task. In this work, we propose a Support Vector Machine based kernel learning approach for detection of splice sites (the exon-intron boundary) in a gene. Electron-Ion Interaction Potential (EIIP) values of nucleotides have been used for mapping character sequences to corresponding numeric sequences. Radial Basis Function (RBF) SVM kernel is trained using EIIP numeric sequences. Furthermore this was tested on test gene dataset for detection of splice site by window (of 12 residues) shifting. Optimum values of window size, various important parameters of SVM kernel have been optimized for a better accuracy. Receiver Operating Characteristic (ROC) curves have been utilized for displaying the sensitivity rate of the classifier and results showed 94.82% accuracy for splice site detection on test dataset.

  17. Statistical quality assessment criteria for a linear mixing model with elliptical t-distribution errors

    NASA Astrophysics Data System (ADS)

    Manolakis, Dimitris G.

    2004-10-01

    The linear mixing model is widely used in hyperspectral imaging applications to model the reflectance spectra of mixed pixels in the SWIR atmospheric window or the radiance spectra of plume gases in the LWIR atmospheric window. In both cases it is important to detect the presence of materials or gases and then estimate their amount, if they are present. The detection and estimation algorithms available for these tasks are related but they are not identical. The objective of this paper is to theoretically investigate how the heavy tails observed in hyperspectral background data affect the quality of abundance estimates and how the F-test, used for endmember selection, is robust to the presence of heavy tails when the model fits the data.

  18. Cochlin-tomoprotein (CTP) detection test identified perilymph leakage preoperatively in revision stapes surgery.

    PubMed

    Kataoka, Yuko; Ikezono, Tetsuo; Fukushima, Kunihiro; Yuen, Koji; Maeda, Yukihide; Sugaya, Akiko; Nishizaki, Kazunori

    2013-08-01

    Perilymphatic fistula (PLF) is defined as an abnormal leakage between perilymph from the labyrinth to the middle ear. Symptoms include hearing loss, tinnitus, and vertigo. The standard mode of PLF detection is intraoperative visualization of perilymph leakage and fistula, which ostensibly confirms the existence of PLF. Other possible methods of diagnosis include confirmation of pneumolabyrinth via diagnostic imaging. Recently, a cochlin-tomoprotein (CTP) detection test has been developed that allows definitive diagnosis of PLF-related hearing loss. We report the case of a 45-year-old man who presented with right-sided tinnitus, hearing loss, and dizziness 30 years after stapes surgery. Middle ear lavage was performed after myringotomy. A preoperative diagnosis of PLF was reached using the CTP detection test. Intraoperative observations included a necrotic long process of the incus, displaced wire piston, and fibrous tissue in the oval window. Perilymph leakage was not evident. The oval window was closed with fascia, and vertigo disappeared within 2 weeks postoperatively. When PLF is suspected after stapes surgery, the CTP detection test can be a useful, highly sensitive, and less invasive method for preoperative diagnosis. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

  19. Diagnosing and ranking retinopathy disease level using diabetic fundus image recuperation approach.

    PubMed

    Somasundaram, K; Rajendran, P Alli

    2015-01-01

    Retinal fundus images are widely used in diagnosing different types of eye diseases. The existing methods such as Feature Based Macular Edema Detection (FMED) and Optimally Adjusted Morphological Operator (OAMO) effectively detected the presence of exudation in fundus images and identified the true positive ratio of exudates detection, respectively. These mechanically detected exudates did not include more detailed feature selection technique to the system for detection of diabetic retinopathy. To categorize the exudates, Diabetic Fundus Image Recuperation (DFIR) method based on sliding window approach is developed in this work to select the features of optic cup in digital retinal fundus images. The DFIR feature selection uses collection of sliding windows with varying range to obtain the features based on the histogram value using Group Sparsity Nonoverlapping Function. Using support vector model in the second phase, the DFIR method based on Spiral Basis Function effectively ranks the diabetic retinopathy disease level. The ranking of disease level on each candidate set provides a much promising result for developing practically automated and assisted diabetic retinopathy diagnosis system. Experimental work on digital fundus images using the DFIR method performs research on the factors such as sensitivity, ranking efficiency, and feature selection time.

  20. Diagnosing and Ranking Retinopathy Disease Level Using Diabetic Fundus Image Recuperation Approach

    PubMed Central

    Somasundaram, K.; Alli Rajendran, P.

    2015-01-01

    Retinal fundus images are widely used in diagnosing different types of eye diseases. The existing methods such as Feature Based Macular Edema Detection (FMED) and Optimally Adjusted Morphological Operator (OAMO) effectively detected the presence of exudation in fundus images and identified the true positive ratio of exudates detection, respectively. These mechanically detected exudates did not include more detailed feature selection technique to the system for detection of diabetic retinopathy. To categorize the exudates, Diabetic Fundus Image Recuperation (DFIR) method based on sliding window approach is developed in this work to select the features of optic cup in digital retinal fundus images. The DFIR feature selection uses collection of sliding windows with varying range to obtain the features based on the histogram value using Group Sparsity Nonoverlapping Function. Using support vector model in the second phase, the DFIR method based on Spiral Basis Function effectively ranks the diabetic retinopathy disease level. The ranking of disease level on each candidate set provides a much promising result for developing practically automated and assisted diabetic retinopathy diagnosis system. Experimental work on digital fundus images using the DFIR method performs research on the factors such as sensitivity, ranking efficiency, and feature selection time. PMID:25945362

  1. The use of computational inspection to identify process window limiting hotspots and predict sub-15nm defects with high capture rate

    NASA Astrophysics Data System (ADS)

    Ham, Boo-Hyun; Kim, Il-Hwan; Park, Sung-Sik; Yeo, Sun-Young; Kim, Sang-Jin; Park, Dong-Woon; Park, Joon-Soo; Ryu, Chang-Hoon; Son, Bo-Kyeong; Hwang, Kyung-Bae; Shin, Jae-Min; Shin, Jangho; Park, Ki-Yeop; Park, Sean; Liu, Lei; Tien, Ming-Chun; Nachtwein, Angelique; Jochemsen, Marinus; Yan, Philip; Hu, Vincent; Jones, Christopher

    2017-03-01

    As critical dimensions for advanced two dimensional (2D) DUV patterning continue to shrink, the exact process window becomes increasingly difficult to determine. The defect size criteria shrink with the patterning critical dimensions and are well below the resolution of current optical inspection tools. As a result, it is more challenging for traditional bright field inspection tools to accurately discover the hotspots that define the process window. In this study, we use a novel computational inspection method to identify the depth-of-focus limiting features of a 10 nm node mask with 2D metal structures (single exposure) and compare the results to those obtained with a traditional process windows qualification (PWQ) method based on utilizing a focus modulated wafer and bright field inspection (BFI) to detect hotspot defects. The method is extended to litho-etch litho-etch (LELE) on a different test vehicle to show that overlay related bridging hotspots also can be identified.

  2. The risk of a second diagnostic window with 4th generation HIV assays: Two cases.

    PubMed

    Niederhauser, C; Ströhle, A; Stolz, M; Müller, F; Tinguely, C

    2009-08-01

    Despite the improved sensitivity of the 4th generation combined antigen/antibody HIV assays, detection of HIV in the early phase of an infection may still be ineffective. Description of two cases that highlight the existence of the "second diagnostic window phase" observed with commonly used sensitive 4th generation HIV assays. Samples were screened with different 4th generation HIV assays. HIV infection was confirmed with an HIV I/II antibody assay, a HIV-1 p24 antigen assay, the INNO-LIA HIV I/II Score Line immunoassay and HIV-1 PCR. In both investigated cases, the limitations of the 4th generation HIV assays within the second diagnostic window were apparent. The overall sensitivity of the commercial 4th generation HIV assays is currently higher than the 3rd generation HIV assays. Nevertheless, the rare occurrence of a second diagnostic window with 4th generation HIV assays strongly suggests that the following up testing algorithms need to be adjusted accordingly.

  3. One-shot phase-shifting phase-grating interferometry with modulation of polarization: case of four interferograms.

    PubMed

    Rodriguez-Zurita, Gustavo; Meneses-Fabian, Cruz; Toto-Arellano, Noel-Ivan; Vázquez-Castillo, José F; Robledo-Sánchez, Carlos

    2008-05-26

    An experimental setup for optical phase extraction from 2-D interferograms using a one-shot phase-shifting technique able to achieve four interferograms with 90 degrees phase shifts in between is presented. The system uses a common-path interferometer consisting of two windows in the input plane and a phase grating in Fourier plane as its pupil. Each window has a birefringent wave plate attached in order to achieve nearly circular polarization of opposite rotations one respect to the other after being illuminated with a 45 degrees linear polarized beam. In the output, interference of the fields associated with replicated windows (diffraction orders) is achieved by a proper choice of the windows spacing with respect to the grating period. The phase shifts to achieve four interferograms simultaneously to perform phase-shifting interferometry can be obtained by placing linear polarizers on each diffraction orders before detection at an appropriate angle. Some experimental results are shown.

  4. Local concurrent error detection and correction in data structures using virtual backpointers

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Li, C.C.J.; Chen, P.P.; Fuchs, W.K.

    1989-11-01

    A new technique, based on virtual backpointers, is presented in this paper for local concurrent error detection and correction in linked data structures. Two new data structures utilizing virtual backpointers, the Virtual Double-Linked List and the B-Tree and Virtual Backpointers, are described. For these structures, double errors within a fixed-size checking window can be detected in constant time and single errors detected during forward moves can be corrected in constant time.

  5. Human anti-HIV IgM detection by the OraQuick ADVANCE® Rapid HIV 1/2 Antibody Test.

    PubMed

    Guillon, Geraldine; Yearwood, Graham; Snipes, Casey; Boschi, Daniel; Reed, Michael R

    2018-01-01

    The Centers for Disease Control and Prevention (CDC) and many public health jurisdictions continue to advocate for the most sensitive rapid HIV test that is available. Currently, the recommendation is to utilize tests that can detect HIV infection biomarkers within 30 days of infection, when initial immune responses are mounted. The infected patient's IgM response is often used to detect acute infection within a 20-25 days window after infection. This requirement applies to lab-based testing with automated analyzers and rapid, point of care (POC) testing used for screening in a non-clinical setting. A recent study has demonstrated that POC tests using a Protein A-based detection system can detect samples with predominantly HIV-1 IgM reactivity (Moshgabadi et al., 2015). The OraQuick ADVANCE ® Rapid HIV-1/2 Antibody Test (OraQuick ADVANCE ®) also uses Protein A as the detection protein in the antibody-binding colloidal gold conjugate, so it is expected that the OraQuick ADVANCE ® Test will also detect samples with predominantly IgM reactivity. This report definitively demonstrates that the OraQuick ADVANCE ® Test can detect IgM antibodies during an acute infection window period of approximately 20-25 days after infection, and is therefore suitable for use in testing environments requiring adherence to current CDC recommendations.

  6. High-Reliability Waveguide Vacuum/Pressure Window

    NASA Technical Reports Server (NTRS)

    Britcliffe, Michael J.; Hanson, Theodore R.; Long, Ezra M.; Montanez, Steven

    2013-01-01

    The NASA Deep Space Network (DSN) uses commercial waveguide windows on the output waveguide of Ka-band (32 GHz) low-noise amplifiers. Mechanical failure of these windows resulted in an unacceptable loss in tracking time. To address this issue, a new Ka-band WR-28 waveguide window has been designed, fabricated, and tested. The window uses a slab of low-loss, low-dielectric constant foam that is bonded into a 1/2-wave-thick waveguide/flange. The foam is a commercially available, rigid, closed-cell polymethacrylimide. It has excellent electrical properties with a dielectric constant of 1.04, and a loss tangent of 0.01. It is relatively strong with a tensile strength of 1 MPa. The material is virtually impermeable to helium. The finished window exhibits a leak rate of less than 3x10(exp -3)cu cm/s with helium. The material is also chemically resistant and can be cleaned with acetone. The window is constructed by fabricating a window body by brazing a short length of WR-28 copper waveguide into a standard rectangular flange, and machining the resulting part to a thickness of 4.6 mm. The foam is machined to a rectangular shape with a dimension of 7.06x3.53 mm. The foam is bonded into the body with a two-part epoxy. After curing, the excess glue and foam are knife-trimmed by hand. The finished window has a loss of less than 0.08 dB (2%) and a return loss of greater than 25 dB at 32 GHz. This meets the requirements for the DSN application. The window is usable for most applications over the entire 26-to-40-GHz waveguide band. The window return loss can be tuned to a required frequency by var y in g the thickness of the window slightly. Most standard waveguide windows use a thin membrane of material bonded into a recess in a waveguide flange, or sandwiched between two flanges with a polymer seal. Designs using the recessed window are prone to mechanical failure over time due to constraints on the dimensions of the recess that allow the bond to fail. Designs using the sandwich method are often permeable to helium, which prohibits the use of helium leak detection. At the time of this reporting, 40 windows have been produced. Twelve are in operation with a combined operating time of over 30,000 hours without a failure.

  7. Measurement Variability of Vertical Scanning Interferometry Tool Used for Orbiter Window Defect Assessment

    NASA Technical Reports Server (NTRS)

    Padula, Santo, II

    2009-01-01

    The ability to sufficiently measure orbiter window defects to allow for window recertification has been an ongoing challenge for the orbiter vehicle program. The recent Columbia accident has forced even tighter constraints on the criteria that must be met in order to recertify windows for flight. As a result, new techniques are being investigated to improve the reliability, accuracy and resolution of the defect detection process. The methodology devised in this work, which is based on the utilization of a vertical scanning interferometric (VSI) tool, shows great promise for meeting the ever increasing requirements for defect detection. This methodology has the potential of a 10-100 fold greater resolution of the true defect depth than can be obtained from the currently employed micrometer based methodology. An added benefit is that it also produces a digital elevation map of the defect, thereby providing information about the defect morphology which can be utilized to ascertain the type of debris that induced the damage. However, in order to successfully implement such a tool, a greater understanding of the resolution capability and measurement repeatability must be obtained. This work focused on assessing the variability of the VSI-based measurement methodology and revealed that the VSI measurement tool was more repeatable and more precise than the current micrometer based approach, even in situations where operator variation could affect the measurement. The analysis also showed that the VSI technique was relatively insensitive to the hardware and software settings employed, making the technique extremely robust and desirable

  8. A randomized approach to speed up the analysis of large-scale read-count data in the application of CNV detection.

    PubMed

    Wang, WeiBo; Sun, Wei; Wang, Wei; Szatkiewicz, Jin

    2018-03-01

    The application of high-throughput sequencing in a broad range of quantitative genomic assays (e.g., DNA-seq, ChIP-seq) has created a high demand for the analysis of large-scale read-count data. Typically, the genome is divided into tiling windows and windowed read-count data is generated for the entire genome from which genomic signals are detected (e.g. copy number changes in DNA-seq, enrichment peaks in ChIP-seq). For accurate analysis of read-count data, many state-of-the-art statistical methods use generalized linear models (GLM) coupled with the negative-binomial (NB) distribution by leveraging its ability for simultaneous bias correction and signal detection. However, although statistically powerful, the GLM+NB method has a quadratic computational complexity and therefore suffers from slow running time when applied to large-scale windowed read-count data. In this study, we aimed to speed up substantially the GLM+NB method by using a randomized algorithm and we demonstrate here the utility of our approach in the application of detecting copy number variants (CNVs) using a real example. We propose an efficient estimator, the randomized GLM+NB coefficients estimator (RGE), for speeding up the GLM+NB method. RGE samples the read-count data and solves the estimation problem on a smaller scale. We first theoretically validated the consistency and the variance properties of RGE. We then applied RGE to GENSENG, a GLM+NB based method for detecting CNVs. We named the resulting method as "R-GENSENG". Based on extensive evaluation using both simulated and empirical data, we concluded that R-GENSENG is ten times faster than the original GENSENG while maintaining GENSENG's accuracy in CNV detection. Our results suggest that RGE strategy developed here could be applied to other GLM+NB based read-count analyses, i.e. ChIP-seq data analysis, to substantially improve their computational efficiency while preserving the analytic power.

  9. Linking Resilience and Transformation as Micro- and Macro Adaptation

    NASA Astrophysics Data System (ADS)

    Friedman, E.; Breitzer, R.; Solecki, W. D.

    2017-12-01

    The concept of resiliency within climate adaptation planning and practice is widespread, but in some ways it has begun to suffer from its own success. While resiliency provides a valuable frame for understanding the conditions and opportunities for localized responses to increasing climate risks, the concept's ubiquitous use leads to it being applied to often conflicting policy agendas, which can mask or limit the capacity to connect efforts focused on near term risk to longer term and emergent climate threats in communities. These challenges are particularly evident in the context of extreme events and in the post extreme event policy windows. To overcome these issues and take advantage of the post-event policy window, the NOAA RISA Climate Change Risk in the Urban Northeast (CCRUN) project has been developing two specific, "boutique", policy tools. These include the PELT (Post-event learning toolkit) and MART (Macro-adaptation Resilience toolkit) toolkits. Embedded in these toolkits are two approaches to small scale strategies often associated with near term action (i.e., micro-adaptation) and large scale strategies associated with broad longer term needs (i.e., macro-adaptation). In this paper, these two approaches - micro and macro adaptation - are theoretically defined and presented in practice through the beta-testing of the PELT and MART toolkits. Most importantly, we illustrate how the theoretical links between resiliency and transformation can be operationalized through the use of these approaches, and how these approaches can be implemented in everyday risk management practice. We present our work through selected case studies in the Northeast US region, specifically in Jamaica Bay, New York, and Eastwick neighborhood in Philadelphia.

  10. A Solar Reflectance Method for Retrieving Cloud Optical Thickness and Droplet Size Over Snow and Ice Surfaces

    NASA Technical Reports Server (NTRS)

    Platnick, S.; Li, J. Y.; King, M. D.; Gerber, H.; Hobbs, P. V.

    1999-01-01

    Cloud optical thickness and effective radius retrievals from solar reflectance measurements are traditionally implemented using a combination of spectral channels that are absorbing and non-absorbing for water particles. Reflectances in non-absorbing channels (e.g., 0.67, 0.86, 1.2 micron spectral window bands) are largely dependent on cloud optical thickness, while longer wavelength absorbing channels (1.6, 2. 1, and 3.7 micron window bands) provide cloud particle size information. Cloud retrievals over ice and snow surfaces present serious difficulties. At the shorter wavelengths, ice is bright and highly variable, both characteristics acting to significantly increase cloud retrieval uncertainty. In contrast, reflectances at the longer wavelengths are relatively small and may be comparable to that of dark open water. A modification to the traditional cloud retrieval technique is devised. The new algorithm uses only a combination of absorbing spectral channels for which the snow/ice albedo is relatively small. Using this approach, retrievals have been made with the MODIS Airborne Simulator (MAS) imager flown aboard the NASA ER-2 from May - June 1998 during the Arctic FIRE-ACE field deployment. Data from several coordinated ER-2 and University of Washington CV-580 in situ aircraft observations of liquid water stratus clouds are examined. MAS retrievals of optical thickness, droplet effective radius, and liquid water path are shown to be in good agreement with the in situ measurements. The initial success of the technique has implications for future operational satellite cloud retrieval algorithms in polar and wintertime regions.

  11. Daily rainfall forecasting for one year in a single run using Singular Spectrum Analysis

    NASA Astrophysics Data System (ADS)

    Unnikrishnan, Poornima; Jothiprakash, V.

    2018-06-01

    Effective modelling and prediction of smaller time step rainfall is reported to be very difficult owing to its highly erratic nature. Accurate forecast of daily rainfall for longer duration (multi time step) may be exceptionally helpful in the efficient planning and management of water resources systems. Identification of inherent patterns in a rainfall time series is also important for an effective water resources planning and management system. In the present study, Singular Spectrum Analysis (SSA) is utilized to forecast the daily rainfall time series pertaining to Koyna watershed in Maharashtra, India, for 365 days after extracting various components of the rainfall time series such as trend, periodic component, noise and cyclic component. In order to forecast the time series for longer time step (365 days-one window length), the signal and noise components of the time series are forecasted separately and then added together. The results of the study show that the method of SSA could extract the various components of the time series effectively and could also forecast the daily rainfall time series for longer duration such as one year in a single run with reasonable accuracy.

  12. Online Detection of Broken Rotor Bar Fault in Induction Motors by Combining Estimation of Signal Parameters via Min-norm Algorithm and Least Square Method

    NASA Astrophysics Data System (ADS)

    Wang, Pan-Pan; Yu, Qiang; Hu, Yong-Jun; Miao, Chang-Xin

    2017-11-01

    Current research in broken rotor bar (BRB) fault detection in induction motors is primarily focused on a high-frequency resolution analysis of the stator current. Compared with a discrete Fourier transformation, the parametric spectrum estimation technique has a higher frequency accuracy and resolution. However, the existing detection methods based on parametric spectrum estimation cannot realize online detection, owing to the large computational cost. To improve the efficiency of BRB fault detection, a new detection method based on the min-norm algorithm and least square estimation is proposed in this paper. First, the stator current is filtered using a band-pass filter and divided into short overlapped data windows. The min-norm algorithm is then applied to determine the frequencies of the fundamental and fault characteristic components with each overlapped data window. Next, based on the frequency values obtained, a model of the fault current signal is constructed. Subsequently, a linear least squares problem solved through singular value decomposition is designed to estimate the amplitudes and phases of the related components. Finally, the proposed method is applied to a simulated current and an actual motor, the results of which indicate that, not only parametric spectrum estimation technique.

  13. Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows.

    PubMed

    Excoffier, Laurent; Lischer, Heidi E L

    2010-05-01

    We present here a new version of the Arlequin program available under three different forms: a Windows graphical version (Winarl35), a console version of Arlequin (arlecore), and a specific console version to compute summary statistics (arlsumstat). The command-line versions run under both Linux and Windows. The main innovations of the new version include enhanced outputs in XML format, the possibility to embed graphics displaying computation results directly into output files, and the implementation of a new method to detect loci under selection from genome scans. Command-line versions are designed to handle large series of files, and arlsumstat can be used to generate summary statistics from simulated data sets within an Approximate Bayesian Computation framework. © 2010 Blackwell Publishing Ltd.

  14. Surface Transient Binding-Based Fluorescence Correlation Spectroscopy (STB-FCS), a Simple and Easy-to-Implement Method to Extend the Upper Limit of the Time Window to Seconds.

    PubMed

    Peng, Sijia; Wang, Wenjuan; Chen, Chunlai

    2018-05-10

    Fluorescence correlation spectroscopy is a powerful single-molecule tool that is able to capture kinetic processes occurring at the nanosecond time scale. However, the upper limit of its time window is restricted by the dwell time of the molecule of interest in the confocal detection volume, which is usually around submilliseconds for a freely diffusing biomolecule. Here, we present a simple and easy-to-implement method, named surface transient binding-based fluorescence correlation spectroscopy (STB-FCS), which extends the upper limit of the time window to seconds. We further demonstrated that STB-FCS enables capture of both intramolecular and intermolecular kinetic processes whose time scales cross several orders of magnitude.

  15. A modified TEW approach to scatter correction for In-111 and Tc-99m dual-isotope small-animal SPECT.

    PubMed

    Prior, Paul; Timmins, Rachel; Petryk, Julia; Strydhorst, Jared; Duan, Yin; Wei, Lihui; Glenn Wells, R

    2016-10-01

    In dual-isotope (Tc-99m/In-111) small-animal single-photon emission computed tomography (SPECT), quantitative accuracy of Tc-99m activity measurements is degraded due to the detection of Compton-scattered photons in the Tc-99m photopeak window, which originate from the In-111 emissions (cross talk) and from the Tc-99m emission (self-scatter). The standard triple-energy window (TEW) estimates the total scatter (self-scatter and cross talk) using one scatter window on either side of the Tc-99m photopeak window, but the estimate is biased due to the presence of unscattered photons in the scatter windows. The authors present a modified TEW method to correct for total scatter that compensates for this bias and evaluate the method in phantoms and in vivo. The number of unscattered Tc-99m and In-111 photons present in each scatter-window projection is estimated based on the number of photons detected in the photopeak of each isotope, using the isotope-dependent energy resolution of the detector. The camera-head-specific energy resolutions for the 140 keV Tc-99m and 171 keV In-111 emissions were determined experimentally by separately sampling the energy spectra of each isotope. Each sampled spectrum was fit with a Linear + Gaussian function. The fitted Gaussian functions were integrated across each energy window to determine the proportion of unscattered photons from each emission detected in the scatter windows. The method was first tested and compared to the standard TEW in phantoms containing Tc-99m:In-111 activity ratios between 0.15 and 6.90. True activities were determined using a dose calibrator, and SPECT activities were estimated from CT-attenuation-corrected images with and without scatter-correction. The method was then tested in vivo in six rats using In-111-liposome and Tc-99m-tetrofosmin to generate cross talk in the area of the myocardium. The myocardium was manually segmented using the SPECT and CT images, and partial-volume correction was performed using a template-based approach. The rat heart was counted in a well-counter to determine the true activity. In the phantoms without correction for Compton-scatter, Tc-99m activity quantification errors as high as 85% were observed. The standard TEW method quantified Tc-99m activity with an average accuracy of -9.0% ± 0.7%, while the modified TEW was accurate within 5% of truth in phantoms with Tc-99m:In-111 activity ratios ≥0.52. Without scatter-correction, In-111 activity was quantified with an average accuracy of 4.1%, and there was no dependence of accuracy on the activity ratio. In rat myocardia, uncorrected images were overestimated by an average of 23% ± 5%, and the standard TEW had an accuracy of -13.8% ± 1.6%, while the modified TEW yielded an accuracy of -4.0% ± 1.6%. Cross talk and self-scatter were shown to produce quantification errors in phantoms as well as in vivo. The standard TEW provided inaccurate results due to the inclusion of unscattered photons in the scatter windows. The modified TEW improved the scatter estimate and reduced the quantification errors in phantoms and in vivo.

  16. Development of an EMCCD for LIDAR applications

    NASA Astrophysics Data System (ADS)

    De Monte, B.; Bell, R. T.

    2017-11-01

    A novel detector, incorporating e2v's EMCCD (L3VisionTM) [1] technology for use in LIDAR (Light Detection And Ranging) applications has been designed, manufactured and characterised. The most critical performance aspect was the requirement to collect charge from a 120μm square detection area for a 667ns temporal sampling window, with low crosstalk between successive samples, followed by signal readout with sub-electron effective noise. Additional requirements included low dark signal, high quantum efficiency at the 355nm laser wavelength and the ability to handle bright laser echoes, without corruption of the much fainter useful signals. The detector architecture used high speed charge binning to combine signal from each sampling window into a single charge packet. This was then passed through a multiplication register (EMCCD) operating with a typical gain of 100X to a conventional charge detection circuit. The detector achieved a typical quantum efficiency of 80% and a total noise in darkness of < 0.5 electrons rms. Development of the detector was supported by ESA.

  17. Weak signal detection: A discrete window of opportunity for achieving 'Vision 90:90:90'?

    PubMed

    Burman, Christopher J; Aphane, Marota; Delobelle, Peter

    2016-01-01

    UNAIDS' Vision 90:90:90 is a call to 'end AIDS'. Developing predictive foresight of the unpredictable changes that this journey will entail could contribute to the ambition of 'ending AIDS'. There are few opportunities for managing unpredictable changes. We introduce 'weak signal detection' as a potential opportunity to fill this void. Combining futures and complexity theory, we reflect on two pilot case studies that involved the Archetype Extraction technique and the SenseMaker(®) Collector(™) tool. Both the piloted techniques have the potentials to surface weak signals--but there is room for improvement. A management response to a complex weak signal requires pattern management, rather than an exclusive focus on behaviour management. Weak signal detection is a window of opportunity to improve resilience to unpredictable changes in the HIV/AIDS landscape that can both reduce the risk that emerges from the changes and increase the visibility of opportunities to exploit the unpredictable changes that could contribute to 'ending AIDS'.

  18. Accumulating pyramid spatial-spectral collaborative coding divergence for hyperspectral anomaly detection

    NASA Astrophysics Data System (ADS)

    Sun, Hao; Zou, Huanxin; Zhou, Shilin

    2016-03-01

    Detection of anomalous targets of various sizes in hyperspectral data has received a lot of attention in reconnaissance and surveillance applications. Many anomaly detectors have been proposed in literature. However, current methods are susceptible to anomalies in the processing window range and often make critical assumptions about the distribution of the background data. Motivated by the fact that anomaly pixels are often distinctive from their local background, in this letter, we proposed a novel hyperspectral anomaly detection framework for real-time remote sensing applications. The proposed framework consists of four major components, sparse feature learning, pyramid grid window selection, joint spatial-spectral collaborative coding and multi-level divergence fusion. It exploits the collaborative representation difference in the feature space to locate potential anomalies and is totally unsupervised without any prior assumptions. Experimental results on airborne recorded hyperspectral data demonstrate that the proposed methods adaptive to anomalies in a large range of sizes and is well suited for parallel processing.

  19. Evaluating efficiency and statistical power of self-controlled case series and self-controlled risk interval designs in vaccine safety.

    PubMed

    Li, Rongxia; Stewart, Brock; Weintraub, Eric

    2016-01-01

    The self-controlled case series (SCCS) and self-controlled risk interval (SCRI) designs have recently become widely used in the field of post-licensure vaccine safety monitoring to detect potential elevated risks of adverse events following vaccinations. The SCRI design can be viewed as a subset of the SCCS method in that a reduced comparison time window is used for the analysis. Compared to the SCCS method, the SCRI design has less statistical power due to fewer events occurring in the shorter control interval. In this study, we derived the asymptotic relative efficiency (ARE) between these two methods to quantify this loss in power in the SCRI design. The equation is formulated as [Formula: see text] (a: control window-length ratio between SCRI and SCCS designs; b: ratio of risk window length and control window length in the SCCS design; and [Formula: see text]: relative risk of exposed window to control window). According to this equation, the relative efficiency declines as the ratio of control-period length between SCRI and SCCS methods decreases, or with an increase in the relative risk [Formula: see text]. We provide an example utilizing data from the Vaccine Safety Datalink (VSD) to study the potential elevated risk of febrile seizure following seasonal influenza vaccine in the 2010-2011 season.

  20. Phthalate Esters in Indoor Window Films in a Northeastern Chinese Urban Center: Film Growth and Implications for Human Exposure.

    PubMed

    Huo, Chun-Yan; Liu, Li-Yan; Zhang, Zi-Feng; Ma, Wan-Li; Song, Wei-Wei; Li, Hai-Ling; Li, Wen-Long; Kannan, Kurunthachalam; Wu, Yong-Kai; Han, Ya-Meng; Peng, Zhi-Xiang; Li, Yi-Fan

    2016-07-19

    Indoor window film samples were collected in buildings during 2014-2015 for the determination of six phthalate diesters (PAEs). Linear regression analysis suggested that the film mass was positively and significantly correlated with the duration of film growth (from 7 to 77 days). PAEs were detected in all window film samples (n = 64). For all the samples with growth days ranged from 7 to 77 days, the median concentrations of total six PAEs (∑6PAEs) in winter and summer window film samples were 9900 ng/m(2) film (2000 μg/g film) and 4700 ng/m(2) film (650 μg/g film), respectively. Among PAEs analyzed, di-2-ethyl-hexyl phthalate (DEHP) was the major compound (71 ± 9.7%), followed by di-n-butyl phthalate (DBP; 20 ± 7.4%) and diisobutyl phthalate (DiBP; 5.1 ± 2.2%). Positive correlations among PAEs suggested their common sources in the window film samples. Room temperature and relative humidity were negatively and significantly correlated with PAEs concentations (in ng/m(2)). Poor ventilation in cold winter in Noreastern China significantly influenced the concentrations of PAEs in window film which suggested higher inhalation exposure dose in winter. The median hazard quotient (HQ) values from PAEs exposure were below 1, suggesting that the intake of PAEs via three exposure pathways was considered as acceptable.

  1. Dual-window dual-bandwidth spectroscopic optical coherence tomography metric for qualitative scatterer size differentiation in tissues.

    PubMed

    Tay, Benjamin Chia-Meng; Chow, Tzu-Hao; Ng, Beng-Koon; Loh, Thomas Kwok-Seng

    2012-09-01

    This study investigates the autocorrelation bandwidths of dual-window (DW) optical coherence tomography (OCT) k-space scattering profile of different-sized microspheres and their correlation to scatterer size. A dual-bandwidth spectroscopic metric defined as the ratio of the 10% to 90% autocorrelation bandwidths is found to change monotonically with microsphere size and gives the best contrast enhancement for scatterer size differentiation in the resulting spectroscopic image. A simulation model supports the experimental results and revealed a tradeoff between the smallest detectable scatterer size and the maximum scatterer size in the linear range of the dual-window dual-bandwidth (DWDB) metric, which depends on the choice of the light source optical bandwidth. Spectroscopic OCT (SOCT) images of microspheres and tonsil tissue samples based on the proposed DWDB metric showed clear differentiation between different-sized scatterers as compared to those derived from conventional short-time Fourier transform metrics. The DWDB metric significantly improves the contrast in SOCT imaging and can aid the visualization and identification of dissimilar scatterer size in a sample. Potential applications include the early detection of cell nuclear changes in tissue carcinogenesis, the monitoring of healing tendons, and cell proliferation in tissue scaffolds.

  2. Video Diagnostic for W7-X Stellarator

    NASA Astrophysics Data System (ADS)

    Sárközi, J.; Grosser, K.; Kocsis, G.; König, R.; Neuner, U.; Molnár, Á.; Petravich, G.; Por, G.; Porempovics, G.; Récsei, S.; Szabó, V.; Szappanos, A.; Zoletnik, S.

    2008-03-01

    The video diagnostics for W7-X—which is under development—is devoted to observe plasma and frrst wall elements during operation, to warn in case of hot spots and dangerous heat load and to give information about the plasma size, position, edge structure, the geometry and location of magnetic islands and distribution of impurities. The video diagnostics will be mounted on the tangential AEQ-ports of the torus that are not straight and have about 2m length and a typical diameter of 0.1m which makes its realization more difficult. The geometry of the 10 tangential views of the AEQ-ports allows giving an almost complete overview of the vessel interior making this diagnostic indispensable for the machine operation. Different concepts of the diagnostics were investigated and finally the following design was selected. As a large heat load is expected on the optical window located at the plasma-facing end of the AEQ-port, the port window is protected by a cooled pinhole. An uncooled shutter located behind the pinhole can be closed to prevent window contamination during vessel conditioning discharges (glow discharge cleaning) and from inter-pulse deposition of soft a-C:H layers. The imaging optics and the detection sensor are located behind the port window in the port tube, which will be under atmospheric pressure. To detect the visible radiation distribution a new camera system called Event Detection Intelligent Camera (EDICAM) is under development. The system is divided into three major separated components. The Sensor Module contains only the selected CMOS sensor, the analog digital converters and the minimal electronics necessary for the communication with the subsequent camera system module called Image Processing and Control Unit (IPCU). Its simple structure makes the Sensor Module suitable to operate despite being exposed to ionizing (neutron, γ-) radiation. The IPCU, which can be located far from the Sensor Module and therefore far from the plasma, is designed to perform real time evaluation of the images detecting predefined events, managing the sensor read-out and the input triggers and producing the output triggers generated by the detected events. The IPCU can also be used to reduce the amount of the stored data. A Standard 10 Gigabit Ethernet fiber optics connection connects the IPCU module to the PC with GigEVision communication protocol.

  3. Flexion-rotation manoeuvre increases dimension of the acoustic target window for paramedian thoracic epidural access.

    PubMed

    Ramsay, N; Walker, J; Tang, R; Vaghadia, H; Sawka, A

    2014-03-01

    The posterior longitudinal ligament (PLL) has been found to be a reliable measure of the acoustic target window for lumbar spinal anaesthesia and a predictive tool for difficult spinals. Currently, there is limited information on the PLL in the thoracic spine and its potential use for optimizing the acoustic target window during thoracic epidural placement. This study examined the effects of changes in body position on the length of the PLL as a measure of the acoustic target window for paramedian thoracic epidural access. We performed thoracic ultrasonography on 30 adult volunteers to measure the length of the PLL at the T9/10 interspace, in five different positions: P1, neutral; P2, thoracic and lumbar flexion; P3, as in position 2 with dorsal table tilt to 10°; P4, as in position 2 with 45° rightward shoulder rotation; and P5, as in position 2 with 45° leftward shoulder rotation. The mean (sd) PLL length increased significantly from 9.9 (3.9) mm in P1 to 11.7 (3.4) mm in P2, 12.9 (3.1) mm in P3, and 13.8 (4.0) mm in P4 (P<0.01, <0.01, and <0.01, respectively). The mean PLL length in P3 and P4 was also significantly longer compared with P2 (P<0.01 and 0.01, respectively). In volunteers, flexion with 10° dorsal table tilt and flexion with right rotation significantly increased the length of the ipsilateral PLL, compared with the standard flexed sitting position, as visualized by paramedian ultrasonography at the level of T9/10.

  4. Impact of smoking on in-vehicle fine particle exposure during driving

    NASA Astrophysics Data System (ADS)

    Sohn, Hongji; Lee, Kiyoung

    2010-09-01

    Indoor smoking ban in public places can reduce secondhand smoke (SHS) exposure. However, smoking in cars and homes has continued. The purpose of this study was to assess particulate matter less than 2.5 μm (PM 2.5) concentration in moving cars with different window opening conditions. The PM 2.5 level was measured by an aerosol spectrometer inside and outside moving cars simultaneously, along with ultrafine particle (UFP) number concentration, speed, temperature and humidity inside cars. Two sport utility vehicles were used. Three different ventilation conditions were evaluated by up to 20 repeated experiments. In the pre-smoking phase, average in-vehicle PM 2.5 concentrations were 16-17 μg m -3. Regardless of different window opening conditions, the PM 2.5 levels promptly increased when smoking occurred and decreased after cigarette was extinguished. Although only a single cigarette was smoked, the average PM 2.5 levels were 506-1307 μg m -3 with different window opening conditions. When smoking was ceased, the average PM 2.5 levels for 15 min were several times higher than the US National Ambient Air Quality Standard of 35 μg m -3. It took longer than 10 min to reach the level of the pre-smoking phase. Although UFP levels had a similar temporal profile of PM 2.5, the increased levels during the smoking phase were relatively small. This study demonstrated that the SHS exposure in cars with just a single cigarette being smoked could exceed the US EPA NAAQS under realistic window opening conditions. Therefore, the findings support the need for public education against smoking in cars and advocacy for a smoke-free car policy.

  5. Motivated attention to cocaine and emotional cues in abstinent and current cocaine users--an ERP study.

    PubMed

    Dunning, Jonathan P; Parvaz, Muhammad A; Hajcak, Greg; Maloney, Thomas; Alia-Klein, Nelly; Woicik, Patricia A; Telang, Frank; Wang, Gene-Jack; Volkow, Nora D; Goldstein, Rita Z

    2011-05-01

    Event-related potentials (ERPs) are a direct measure of neural activity and are ideally suited to study the time-course of attentional engagement with emotional and drug-related stimuli in addiction. In particular, the late positive potential (LPP) appears to be enhanced following cocaine-related compared with neutral stimuli in human participants with cocaine use disorders (CUD). However, previous studies have not directly compared cocaine-related with emotional stimuli while examining potential differences between abstinent and current cocaine users. The present study examined ERPs in 55 CUD (27 abstinent and 28 current users) and 29 matched healthy controls while they passively viewed pleasant, unpleasant, neutral and cocaine-related pictures. To examine the time-course of attention to these stimuli, we analysed both an early and later window in the LPP as well as the early posterior negativity (EPN), established in assessing motivated attention. Cocaine pictures elicited increased electrocortical measures of motivated attention in ways similar to affectively pleasant and unpleasant pictures in all CUD, an effect that was no longer discernible during the late LPP window for the current users. This group also exhibited deficient processing of the other emotional stimuli (early LPP window - pleasant pictures; late LPP window - pleasant and unpleasant pictures). Results were unique to the LPP and not EPN. Taken together, results support a relatively early attention bias to cocaine stimuli in cocaine-addicted individuals, further suggesting that recent cocaine use decreases such attention bias during later stages of processing but at the expense of deficient processing of other emotional stimuli. European Journal of Neuroscience © 2011 Federation of European Neuroscience Societies and Blackwell Publishing Ltd. No claim to original US government works.

  6. A Hybrid Approach for CpG Island Detection in the Human Genome.

    PubMed

    Yang, Cheng-Hong; Lin, Yu-Da; Chiang, Yi-Cheng; Chuang, Li-Yeh

    2016-01-01

    CpG islands have been demonstrated to influence local chromatin structures and simplify the regulation of gene activity. However, the accurate and rapid determination of CpG islands for whole DNA sequences remains experimentally and computationally challenging. A novel procedure is proposed to detect CpG islands by combining clustering technology with the sliding-window method (PSO-based). Clustering technology is used to detect the locations of all possible CpG islands and process the data, thus effectively obviating the need for the extensive and unnecessary processing of DNA fragments, and thus improving the efficiency of sliding-window based particle swarm optimization (PSO) search. This proposed approach, named ClusterPSO, provides versatile and highly-sensitive detection of CpG islands in the human genome. In addition, the detection efficiency of ClusterPSO is compared with eight CpG island detection methods in the human genome. Comparison of the detection efficiency for the CpG islands in human genome, including sensitivity, specificity, accuracy, performance coefficient (PC), and correlation coefficient (CC), ClusterPSO revealed superior detection ability among all of the test methods. Moreover, the combination of clustering technology and PSO method can successfully overcome their respective drawbacks while maintaining their advantages. Thus, clustering technology could be hybridized with the optimization algorithm method to optimize CpG island detection. The prediction accuracy of ClusterPSO was quite high, indicating the combination of CpGcluster and PSO has several advantages over CpGcluster and PSO alone. In addition, ClusterPSO significantly reduced implementation time.

  7. Rootkit Detection Using a Cross-View Clean Boot Method

    DTIC Science & Technology

    2013-03-01

    FindNextFile: [2] Kernel32.dll 4. SSDTHooks r -- ... CALL NtQueryDirectoryFile 5. Code Patch ing - 6. Layered Driver 4 NtQueryDirectoryFile : 7...NTFS Driver 0 Volume Manger Disk Driver [2] I. Disk Driver r ! J IAT hooks take advantage of function calls in applications [13]. When an...f36e923898161fa7be50810288e2f48a 61 Appendix D: Windows Source Code Windows Batch File @echo o f f py thon walk . py pause shutdown − r − t 0 Walk.py in

  8. Window Area and Development Drive Spatial Variation in Bird-Window Collisions in an Urban Landscape

    PubMed Central

    Hager, Stephen B.; Cosentino, Bradley J.; McKay, Kelly J.; Monson, Cathleen; Zuurdeeg, Walt; Blevins, Brian

    2013-01-01

    Collisions with windows are an important human-related threat to birds in urban landscapes. However, the proximate drivers of collisions are not well understood, and no study has examined spatial variation in mortality in an urban setting. We hypothesized that the number of fatalities at buildings varies with window area and habitat features that influence avian community structure. In 2010 we documented bird-window collisions (BWCs) and characterized avian community structure at 20 buildings in an urban landscape in northwestern Illinois, USA. For each building and season, we conducted 21 daily surveys for carcasses and nine point count surveys to estimate relative abundance, richness, and diversity. Our sampling design was informed by experimentally estimated carcass persistence times and detection probabilities. We used linear and generalized linear mixed models to evaluate how habitat features influenced community structure and how mortality was affected by window area and factors that correlated with community structure. The most-supported model was consistent for all community indices and included effects of season, development, and distance to vegetated lots. BWCs were related positively to window area and negatively to development. We documented mortalities for 16/72 (22%) species (34 total carcasses) recorded at buildings, and BWCs were greater for juveniles than adults. Based on the most-supported model of BWCs, the median number of annual predicted fatalities at study buildings was 3 (range = 0–52). These results suggest that patchily distributed environmental resources and levels of window area in buildings create spatial variation in BWCs within and among urban areas. Current mortality estimates place little emphasis on spatial variation, which precludes a fundamental understanding of the issue. To focus conservation efforts, we illustrate how knowledge of the structural and environmental factors that influence bird-window collisions can be used to predict fatalities in the broader landscape. PMID:23326420

  9. Window area and development drive spatial variation in bird-window collisions in an urban landscape.

    PubMed

    Hager, Stephen B; Cosentino, Bradley J; McKay, Kelly J; Monson, Cathleen; Zuurdeeg, Walt; Blevins, Brian

    2013-01-01

    Collisions with windows are an important human-related threat to birds in urban landscapes. However, the proximate drivers of collisions are not well understood, and no study has examined spatial variation in mortality in an urban setting. We hypothesized that the number of fatalities at buildings varies with window area and habitat features that influence avian community structure. In 2010 we documented bird-window collisions (BWCs) and characterized avian community structure at 20 buildings in an urban landscape in northwestern Illinois, USA. For each building and season, we conducted 21 daily surveys for carcasses and nine point count surveys to estimate relative abundance, richness, and diversity. Our sampling design was informed by experimentally estimated carcass persistence times and detection probabilities. We used linear and generalized linear mixed models to evaluate how habitat features influenced community structure and how mortality was affected by window area and factors that correlated with community structure. The most-supported model was consistent for all community indices and included effects of season, development, and distance to vegetated lots. BWCs were related positively to window area and negatively to development. We documented mortalities for 16/72 (22%) species (34 total carcasses) recorded at buildings, and BWCs were greater for juveniles than adults. Based on the most-supported model of BWCs, the median number of annual predicted fatalities at study buildings was 3 (range = 0-52). These results suggest that patchily distributed environmental resources and levels of window area in buildings create spatial variation in BWCs within and among urban areas. Current mortality estimates place little emphasis on spatial variation, which precludes a fundamental understanding of the issue. To focus conservation efforts, we illustrate how knowledge of the structural and environmental factors that influence bird-window collisions can be used to predict fatalities in the broader landscape.

  10. EXTRAGALACTIC MILLIMETER-WAVE SOURCES IN SOUTH POLE TELESCOPE SURVEY DATA: SOURCE COUNTS, CATALOG, AND STATISTICS FOR AN 87 SQUARE-DEGREE FIELD

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Vieira, J. D.; Crawford, T. M.; Switzer, E. R.

    2010-08-10

    We report the results of an 87 deg{sup 2} point-source survey centered at R.A. 5{sup h}30{sup m}, decl. -55{sup 0} taken with the South Pole Telescope at 1.4 and 2.0 mm wavelengths with arcminute resolution and milli-Jansky depth. Based on the ratio of flux in the two bands, we separate the detected sources into two populations, one consistent with synchrotron emission from active galactic nuclei and the other consistent with thermal emission from dust. We present source counts for each population from 11 to 640 mJy at 1.4 mm and from 4.4 to 800 mJy at 2.0 mm. The 2.0more » mm counts are dominated by synchrotron-dominated sources across our reported flux range; the 1.4 mm counts are dominated by synchrotron-dominated sources above {approx}15 mJy and by dust-dominated sources below that flux level. We detect 141 synchrotron-dominated sources and 47 dust-dominated sources at signal-to-noise ratio S/N >4.5 in at least one band. All of the most significantly detected members of the synchrotron-dominated population are associated with sources in previously published radio catalogs. Some of the dust-dominated sources are associated with nearby (z << 1) galaxies whose dust emission is also detected by the Infrared Astronomy Satellite. However, most of the bright, dust-dominated sources have no counterparts in any existing catalogs. We argue that these sources represent the rarest and brightest members of the population commonly referred to as submillimeter galaxies (SMGs). Because these sources are selected at longer wavelengths than in typical SMG surveys, they are expected to have a higher mean redshift distribution and may provide a new window on galaxy formation in the early universe.« less

  11. Compound windows of the Hénon-map

    NASA Astrophysics Data System (ADS)

    Lorenz, Edward N.

    2008-08-01

    For the two-parameter second-order Hénon map, the shapes and locations of the periodic windows-continua of parameter values for which solutions x0,x1,… can be stably periodic, embedded in larger regions where chaotic solutions or solutions of other periods prevail-are found by a random searching procedure and displayed graphically. Many windows have a typical shape, consisting of a central “body” from which four narrow “antennae” extend. Such windows, to be called compound windows, are often arranged in bands, to be called window streets, that are made up largely of small detected but poorly resolved compound windows. For each fundamental subwindow-the portion of a window where a fundamental period prevails-a stability measure U is introduced; where the solution is stable, |U|<1. Curves of constant U are found by numerical integration. Along one line in parameter space the Hénon-map reduces to the one-parameter first-order logistic map, and two antennae from each compound window intersect this line. The curves where U=1 and U=-1 that bound either antenna are close together within these intersections, but, as either curve with U=-1 leaves the line, it diverges from the curve where U=1, crosses the other curve where U=-1, and nears the other curve where U=1, forming another antenna. The region bounded by the numerically determined curves coincides with the subwindow as found by random searching. A fourth-degree equation for an idealized curve of constant U is established. Points in parameter space producing periodic solutions where x0=xm=0, for given values of m, are found to lie on Cantor sets of curves that closely fit the window streets. Points producing solutions where x0=xm=0 and satisfying a third condition, approximating the condition that xn be bounded as n→-∞, lie on curves, to be called street curves of order m, that approximate individual members of the Cantor set and individual window streets. Compound windows of period m+m‧ tend to occur near the intersections of street curves of orders m and m‧. Some exceptions to what appear to be fairly general results are noted. The exceptions render it difficult to establish general theorems.

  12. Lidar point density analysis: implications for identifying water bodies

    USGS Publications Warehouse

    Worstell, Bruce B.; Poppenga, Sandra K.; Evans, Gayla A.; Prince, Sandra

    2014-01-01

    Most airborne topographic light detection and ranging (lidar) systems operate within the near-infrared spectrum. Laser pulses from these systems frequently are absorbed by water and therefore do not generate reflected returns on water bodies in the resulting void regions within the lidar point cloud. Thus, an analysis of lidar voids has implications for identifying water bodies. Data analysis techniques to detect reduced lidar return densities were evaluated for test sites in Blackhawk County, Iowa, and Beltrami County, Minnesota, to delineate contiguous areas that have few or no lidar returns. Results from this study indicated a 5-meter radius moving window with fewer than 23 returns (28 percent of the moving window) was sufficient for delineating void regions. Techniques to provide elevation values for void regions to flatten water features and to force channel flow in the downstream direction also are presented.

  13. Translucent windows: how uncertainty in competitive interactions impacts detection of community pattern.

    PubMed

    D'Andrea, Rafael; Ostling, Annette; O'Dwyer, James P

    2018-06-01

    Traits can provide a window into the mechanisms that maintain coexistence among competing species. Recent theory suggests that competitive interactions will lead to groups, or clusters, of species with similar traits. However, theoretical predictions typically assume complete knowledge of the map between competition and measured traits. These assumptions limit the plausible application of these patterns for inferring competitive interactions in nature. Here, we relax these restrictions and find that the clustering pattern is robust to contributions of unknown or unobserved niche axes. However, it may not be visible unless measured traits are close proxies for niche strategies. We conclude that patterns along single niche axes may reveal properties of interspecific competition in nature, but detecting these patterns requires natural history expertise firmly tying traits to niches. © 2018 John Wiley & Sons Ltd/CNRS.

  14. Detection and display of acoustic window for guiding and training cardiac ultrasound users

    NASA Astrophysics Data System (ADS)

    Huang, Sheng-Wen; Radulescu, Emil; Wang, Shougang; Thiele, Karl; Prater, David; Maxwell, Douglas; Rafter, Patrick; Dupuy, Clement; Drysdale, Jeremy; Erkamp, Ramon

    2014-03-01

    Successful ultrasound data collection strongly relies on the skills of the operator. Among different scans, echocardiography is especially challenging as the heart is surrounded by ribs and lung tissue. Less experienced users might acquire compromised images because of suboptimal hand-eye coordination and less awareness of artifacts. Clearly, there is a need for a tool that can guide and train less experienced users to position the probe optimally. We propose to help users with hand-eye coordination by displaying lines overlaid on B-mode images. The lines indicate the edges of blockages (e.g., ribs) and are updated in real time according to movement of the probe relative to the blockages. They provide information about how probe positioning can be improved. To distinguish between blockage and acoustic window, we use coherence, an indicator of channel data similarity after applying focusing delays. Specialized beamforming was developed to estimate coherence. Image processing is applied to coherence maps to detect unblocked beams and the angle of the lines for display. We built a demonstrator based on a Philips iE33 scanner, from which beamsummed RF data and video output are transferred to a workstation for processing. The detected lines are overlaid on B-mode images and fed back to the scanner display to provide users real-time guidance. Using such information in addition to B-mode images, users will be able to quickly find a suitable acoustic window for optimal image quality, and improve their skill.

  15. Adaptive Texture Synthesis for Large Scale City Modeling

    NASA Astrophysics Data System (ADS)

    Despine, G.; Colleu, T.

    2015-02-01

    Large scale city models textured with aerial images are well suited for bird-eye navigation but generally the image resolution does not allow pedestrian navigation. One solution to face this problem is to use high resolution terrestrial photos but it requires huge amount of manual work to remove occlusions. Another solution is to synthesize generic textures with a set of procedural rules and elementary patterns like bricks, roof tiles, doors and windows. This solution may give realistic textures but with no correlation to the ground truth. Instead of using pure procedural modelling we present a method to extract information from aerial images and adapt the texture synthesis to each building. We describe a workflow allowing the user to drive the information extraction and to select the appropriate texture patterns. We also emphasize the importance to organize the knowledge about elementary pattern in a texture catalogue allowing attaching physical information, semantic attributes and to execute selection requests. Roofs are processed according to the detected building material. Façades are first described in terms of principal colours, then opening positions are detected and some window features are computed. These features allow selecting the most appropriate patterns from the texture catalogue. We experimented this workflow on two samples with 20 cm and 5 cm resolution images. The roof texture synthesis and opening detection were successfully conducted on hundreds of buildings. The window characterization is still sensitive to the distortions inherent to the projection of aerial images onto the facades.

  16. A comparison of climatological observing windows and their impact on detecting daily temperature extrema

    NASA Astrophysics Data System (ADS)

    Žaknić-Ćatović, Ana; Gough, William A.

    2018-04-01

    Climatological observing window (COW) is defined as a time frame over which continuous or extreme air temperature measurements are collected. A 24-h time interval, ending at 00UTC or shifted to end at 06UTC, has been associated with difficulties in characterizing daily temperature extrema. A fixed 24-h COW used to obtain the temperature minima leads to potential misidentification due to fragmentation of "nighttime" into two subsequent nighttime periods due to the time discretization interval. The correct identification of air temperature extrema is achievable using a COW that identifies daily minimum over a single nighttime period and maximum over a single daytime period, as determined by sunrise and sunset. Due to a common absence of hourly air temperature observations, the accuracy of the mean temperature estimation is dependent on the accuracy of determination of diurnal air temperature extrema. Qualitative and quantitative criteria were used to examine the impact of the COW on detecting daily air temperature extrema. The timing of the 24-h observing window occasionally affects the determination of daily extrema through a mischaracterization of the diurnal minima and by extension can lead to errors in determining daily mean temperature. Hourly air temperature data for the time period from year 1987 to 2014, obtained from Toronto Buttonville Municipal Airport weather station, were used in analysis of COW impacts on detection of daily temperature extrema and calculation of annual temperature averages based on such extrema.

  17. Waveform Fingerprinting for Efficient Seismic Signal Detection

    NASA Astrophysics Data System (ADS)

    Yoon, C. E.; OReilly, O. J.; Beroza, G. C.

    2013-12-01

    Cross-correlating an earthquake waveform template with continuous waveform data has proven a powerful approach for detecting events missing from earthquake catalogs. If templates do not exist, it is possible to divide the waveform data into short overlapping time windows, then identify window pairs with similar waveforms. Applying these approaches to earthquake monitoring in seismic networks has tremendous potential to improve the completeness of earthquake catalogs, but because effort scales quadratically with time, it rapidly becomes computationally infeasible. We develop a fingerprinting technique to identify similar waveforms, using only a few compact features of the original data. The concept is similar to human fingerprints, which utilize key diagnostic features to identify people uniquely. Analogous audio-fingerprinting approaches have accurately and efficiently found similar audio clips within large databases; example applications include identifying songs and finding copyrighted content within YouTube videos. In order to fingerprint waveforms, we compute a spectrogram of the time series, and segment it into multiple overlapping windows (spectral images). For each spectral image, we apply a wavelet transform, and retain only the sign of the maximum magnitude wavelet coefficients. This procedure retains just the large-scale structure of the data, providing both robustness to noise and significant dimensionality reduction. Each fingerprint is a high-dimensional, sparse, binary data object that can be stored in a database without significant storage costs. Similar fingerprints within the database are efficiently searched using locality-sensitive hashing. We test this technique on waveform data from the Northern California Seismic Network that contains events not detected in the catalog. We show that this algorithm successfully identifies similar waveforms and detects uncataloged low magnitude events in addition to cataloged events, while running to completion faster than a comparison waveform autocorrelation code.

  18. Infrared Radiation Filament And Metnod Of Manufacture

    DOEpatents

    Johnson, Edward A.

    1998-11-17

    An improved IR radiation source is provided by the invention. A radiation filament has a textured surface produced by seeded ion bombardment of a metal foil which is cut to a serpentine shape and mounted in a windowed housing. Specific ion bombardment texturing techniques tune the surface to maximize emissions in the desired wavelength range and to limit emissions outside that narrow range, particularly at longer wavelengths. A combination of filament surface texture, thickness, material, shape and power circuit feedback control produce wavelength controlled and efficient radiation at much lower power requirements than devices of the prior art.

  19. Design and fabrication of a window for the gas Cherenkov detector 3

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Fatherley, V. E., E-mail: vef@lanl.gov; Bingham, D. A.; Cartelli, M. D.

    2016-11-15

    The gas Cherenkov detector 3 was designed at Los Alamos National Laboratory for use in inertial confinement fusion experiments at both the Omega Laser Facility and the National Ignition Facility. This instrument uses a low-Z gamma-to-electron convertor plate and high pressure gas to convert MeV gammas into UV/visible Cherenkov photons for fast optical detection. This is a follow-on diagnostic from previous versions, with two notable differences: the pressure of the gas is four times higher, and it allows the use of fluorinated gas, requiring metal seals. These changes force significant changes in the window component, having a unique set ofmore » requirements and footprint limitations. The selected solution for this component, a sapphire window brazed into a stainless steel flange housing, is described.« less

  20. Design and fabrication of a window for the Gas Cherenkov Detector 3

    DOE PAGES

    Fatherley, Valerie E.; Bingham, David A.; Cartelli, Myles Derrick; ...

    2016-08-23

    The gas Cherenkov detector 3 was designed at Los Alamos National Laboratory for use in inertial confinement fusion experiments at both the Omega Laser Facility and the National Ignition Facility. This instrument uses a low-Z gamma-to-electron convertor plate and high pressure gas to convert MeV gammas into UV/visible Cherenkov photons for fast optical detection. This is a follow-on diagnostic from previous versions, with two notable differences: the pressure of the gas is four times higher, and it allows the use of fluorinated gas, requiring metal seals. These changes force significant changes in the window component, having a unique set ofmore » requirements and footprint limitations. Finally, the selected solution for this component, a sapphire window brazed into a stainless steel flange housing, is described.« less

  1. Novel high-pressure windows made of glass-like carbon for x-ray analysis.

    PubMed

    Testemale, Denis; Prat, Alain; Lahera, Eric; Hazemann, Jean-Louis

    2016-07-01

    Original high-pressure glass-like carbon windows developed for x-ray spectroscopy applications are presented. The scientific and technological background of this new technical development is exposed, in particular the limitations of our existing beryllium windows in the context of x-ray absorption spectroscopy (XAS) measurements of solutions with very low solute concentrations at hydrothermal conditions (0.1-200 MPa, 30-600 °C). The benefits of glass-like carbon are exposed, notably its non-crystalline character, the absence of impurities which has been verified by micro-fluorescence laboratory measurements, and its non-toxicity which makes its machining safer. Finite elements mechanical calculations and experimental pressure tests were conducted to determine the pressure limits of windows with two different geometries: cylindrical (thickness 0.5 mm) and inversed-dome shape (thickness 0.5 mm at the tip of the dome). The former break at 150 MPa and the latter show no sign of rupture at 400 MPa. Recent XAS measurements conducted with the new dome shaped windows are presented to show the advantages of the design that allow for the detection of very low concentrations in the transmission mode (down to 30 ppm) and the acquisition of fluorescence XAS spectra in diluted solutions at high pressure. Eventually the perspectives of this original development are discussed.

  2. LIGO and the opening of a unique observational window on the universe.

    PubMed

    Kalogera, Vassiliki; Lazzarini, Albert

    2017-03-21

    A unique window on the universe opened on September 14, 2015, with direct detection of gravitational waves by the Advanced Laser Interferometer Gravitational-Wave Observatory (LIGO) detectors. This event culminated a half-century effort around the globe to develop terrestrial detectors of adequate sensitivity to achieve this goal. It also happened appropriately only a few months before the centennial of Einstein's final paper introducing the general theory of relativity. This detection provided the surprising discovery of a coalescing pair of "heavy" black holes (more massive than [Formula: see text] M[Formula: see text]) leading to the formation of a spinning [Formula: see text]62 solar mass black hole. One more binary black-hole detection and a significant candidate event demonstrated that a population of such merging binaries is formed in nature with a broad mass spectrum. This unique observational sample has already provided concrete measurements on the coalescence rates and has allowed us to test the theory of general relativity in the strong-field regime. As this nascent field of gravitational-wave astrophysics is emerging we are looking forward to the detection of binary mergers involving neutron stars and their electromagnetic counterparts, as well as continuous-wave sources, supernovae, a stochastic confusion background of compact-object mergers, known sources detected in unexpected ways, and completely unknown sources.

  3. LIGO and the opening of a unique observational window on the universe

    PubMed Central

    Kalogera, Vassiliki; Lazzarini, Albert

    2017-01-01

    A unique window on the universe opened on September 14, 2015, with direct detection of gravitational waves by the Advanced Laser Interferometer Gravitational-Wave Observatory (LIGO) detectors. This event culminated a half-century effort around the globe to develop terrestrial detectors of adequate sensitivity to achieve this goal. It also happened appropriately only a few months before the centennial of Einstein’s final paper introducing the general theory of relativity. This detection provided the surprising discovery of a coalescing pair of “heavy” black holes (more massive than ≃25 M๏) leading to the formation of a spinning ≃62 solar mass black hole. One more binary black-hole detection and a significant candidate event demonstrated that a population of such merging binaries is formed in nature with a broad mass spectrum. This unique observational sample has already provided concrete measurements on the coalescence rates and has allowed us to test the theory of general relativity in the strong-field regime. As this nascent field of gravitational-wave astrophysics is emerging we are looking forward to the detection of binary mergers involving neutron stars and their electromagnetic counterparts, as well as continuous-wave sources, supernovae, a stochastic confusion background of compact-object mergers, known sources detected in unexpected ways, and completely unknown sources. PMID:28283663

  4. Window flaw detection by backscatter lighting

    NASA Technical Reports Server (NTRS)

    Crockett, L. K.; Minton, F. R.

    1978-01-01

    Portable fiber-optic probe detects tiny flaws in transparent materials. Probe transmits light through surface to illuminate interior of material by backscattering off its edges. Light-sensitive contact paper records scratch pattern. Technique can be used for rapid visual checks. Flexible fiber optics are safely used in explosive or flammable areas; they present no hazard of breakage or contamination in controlled environments.

  5. First results of ground-based LWIR hyperspectral imaging remote gas detection

    NASA Astrophysics Data System (ADS)

    Zheng, Wei-jian; Lei, Zheng-gang; Yu, Chun-chao; Wang, Hai-yang; Fu, Yan-peng; Liao, Ning-fang; Su, Jun-hong

    2014-11-01

    The new progress of ground-based long-wave infrared remote sensing is presented. The LWIR hyperspectral imaging by using the windowing spatial and temporal modulation Fourier spectroscopy, and the results of outdoor ether gas detection, verify the features of LWIR hyperspectral imaging remote sensing and technical approach. It provides a new technical means for ground-based gas remote sensing.

  6. Strong copper(II) species in estuarine and sea waters investigated by a method with high detection window.

    PubMed

    Alberti, Giancarla; Biesuz, Raffaela; D'Agostino, Girolamo; Scarponi, Giuseppe; Pesavento, Maria

    2007-02-15

    The distribution of copper(II) in species of different stability in some estuarine and sea water samples (Adriatic Sea) was investigated by a method based on the sorption of the metal ion on a strongly sorbing resin, Chelex 100, whose sorbing properties have been previously characterized. From them, it is possible to predict very high values of detection windows at the considered conditions, for example side reaction coefficient as high as 10(10) at pH 7.5. Strong copper(II) species in equilibrium with Chelex 100 were detected, at concentration 2-20nM, with a reaction coefficient approximately 10(10.6) at pH 7.45 in sea water, strictly depending on the acidity. They represent 50-70% of the total metal ion and are the strongest copper(II) complexes found in sea water. Weak complexes too were detected in all the samples, with reaction coefficient lower than ca. 10(9) at the same pH. The method applied, named resin titration (RT), was described in a previous investigation, and is here modified in order to be carried out on oceanographic boat during a cruise in the Adriatic Sea.

  7. Development of a Near-Ir Cavity Enhanced Absorption Spectrometer for the Detection of Atmospheric Oxidation Products and Organoamines

    NASA Astrophysics Data System (ADS)

    Eddingsaas, Nathan C.; Jewell, Breanna; Thurnherr, Emily

    2014-06-01

    An estimated 10,000 to 100,000 different compounds have been measured in the atmosphere, each one undergoes many oxidation reactions that may or may not degrade air quality. To date, the fate of even some of the most abundant hydrocarbons in the atmosphere is poorly understood. One difficulty is the detection of atmospheric oxidation products that are very labile and decompose during analysis. To study labile species under atmospheric conditions, a highly sensitive, non-destructive technique is needed. Here we describe a near-IR incoherent broadband cavity enhanced absorption spectroscopy (IBBCEAS) setup that we are developing to meet this end. We have chosen to utilize the near-IR, where vibrational overtone absorptions are observed, due to the clean spectral windows and better spectral separation of absorption features. In one spectral window we can simultaneously and continuously monitor the composition of alcohols, hydroperoxides, and carboxylic acids in an air mass. In addition, we have used our CEAS setup to detect organoamines. The long effective path length of CEAS allows for low detection limits, even of the overtone absorption features, at ppb and ppt levels.

  8. Stereo matching using census cost over cross window and segmentation-based disparity refinement

    NASA Astrophysics Data System (ADS)

    Li, Qingwu; Ni, Jinyan; Ma, Yunpeng; Xu, Jinxin

    2018-03-01

    Stereo matching is a vital requirement for many applications, such as three-dimensional (3-D) reconstruction, robot navigation, object detection, and industrial measurement. To improve the practicability of stereo matching, a method using census cost over cross window and segmentation-based disparity refinement is proposed. First, a cross window is obtained using distance difference and intensity similarity in binocular images. Census cost over the cross window and color cost are combined as the matching cost, which is aggregated by the guided filter. Then, winner-takes-all strategy is used to calculate the initial disparities. Second, a graph-based segmentation method is combined with color and edge information to achieve moderate under-segmentation. The segmented regions are classified into reliable regions and unreliable regions by consistency checking. Finally, the two regions are optimized by plane fitting and propagation, respectively, to match the ambiguous pixels. The experimental results are on Middlebury Stereo Datasets, which show that the proposed method has good performance in occluded and discontinuous regions, and it obtains smoother disparity maps with a lower average matching error rate compared with other algorithms.

  9. Assessment and forensic application of laser-induced breakdown spectroscopy (LIBS) for the discrimination of Australian window glass.

    PubMed

    El-Deftar, Moteaa M; Speers, Naomi; Eggins, Stephen; Foster, Simon; Robertson, James; Lennard, Chris

    2014-08-01

    A commercially available laser-induced breakdown spectroscopy (LIBS) instrument was evaluated for the determination of elemental composition of twenty Australian window glass samples, consisting of 14 laminated samples and 6 non-laminated samples (or not otherwise specified) collected from broken windows at crime scenes. In this study, the LIBS figures of merit were assessed in terms of accuracy, limits of detection and precision using three standard reference materials (NIST 610, 612, and 1831). The discrimination potential of LIBS was compared to that obtained using laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS), X-ray microfluorescence spectroscopy (μXRF) and scanning electron microscopy energy dispersive X-ray spectrometry (SEM-EDX) for the analysis of architectural window glass samples collected from crime scenes in the Canberra region, Australia. Pairwise comparisons were performed using a three-sigma rule, two-way ANOVA and Tukey's HSD test at 95% confidence limit in order to investigate the discrimination power for window glass analysis. The results show that the elemental analysis of glass by LIBS provides a discrimination power greater than 97% (>98% when combined with refractive index data), which was comparable to the discrimination powers obtained by LA-ICP-MS and μXRF. These results indicate that LIBS is a feasible alternative to the more expensive LA-ICP-MS and μXRF options for the routine forensic analysis of window glass samples. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

  10. Hard X-Ray Burst Detected From Caltech Plasma Jet Experiment Magnetic Reconnection Event

    NASA Astrophysics Data System (ADS)

    Marshall, Ryan S.; Bellan, Paul M.

    2016-10-01

    In the Caltech plasma jet experiment a 100 kA MHD driven jet becomes kink unstable leading to a Rayleigh-Taylor instability that quickly causes a magnetic reconnection event. Movies show that the Rayleigh-Taylor instability is simultaneous with voltage spikes across the electrodes that provide the current that drives the jet. Hard x-rays between 4 keV and 9 keV have now been observed using an x-ray scintillator detector mounted just outside of a kapton window on the vacuum chamber. Preliminary results indicate that the timing of the x-ray burst coincides with a voltage spike on the electrodes occurring in association with the Rayleigh-Taylor event. The x-ray signal accompanies the voltage spike and Rayleigh-Taylor event in approximately 50% of the shots. A possible explanation for why the x-ray signal is sometimes missing is that the magnetic reconnection event may be localized to a specific region of the plasma outside the line of sight of the scintillator. The x-ray signal has also been seen accompanying the voltage spike when no Rayleigh-Taylor is observed. This may be due to the interframe timing on the camera being longer than the very short duration of the Rayleigh-Taylor instability.

  11. Secure smart grid communications and information integration based on digital watermarking in wireless sensor networks

    NASA Astrophysics Data System (ADS)

    Yan, Xin; Zhang, Ling; Wu, Yang; Luo, Youlong; Zhang, Xiaoxing

    2017-02-01

    As more and more wireless sensor nodes and networks are employed to acquire and transmit the state information of power equipment in smart grid, we are in urgent need of some viable security solutions to ensure secure smart grid communications. Conventional information security solutions, such as encryption/decryption, digital signature and so forth, are not applicable to wireless sensor networks in smart grid any longer, where bulk messages need to be exchanged continuously. The reason is that these cryptographic solutions will account for a large portion of the extremely limited resources on sensor nodes. In this article, a security solution based on digital watermarking is adopted to achieve the secure communications for wireless sensor networks in smart grid by data and entity authentications at a low cost of operation. Our solution consists of a secure framework of digital watermarking, and two digital watermarking algorithms based on alternating electric current and time window, respectively. Both watermarking algorithms are composed of watermark generation, embedding and detection. The simulation experiments are provided to verify the correctness and practicability of our watermarking algorithms. Additionally, a new cloud-based architecture for the information integration of smart grid is proposed on the basis of our security solutions.

  12. A novel, long-lived, and highly engraftable immunodeficient mouse model of mucopolysaccharidosis type I.

    PubMed

    Mendez, Daniel C; Stover, Alexander E; Rangel, Anthony D; Brick, David J; Nethercott, Hubert E; Torres, Marissa A; Khalid, Omar; Wong, Andrew Ms; Cooper, Jonathan D; Jester, James V; Monuki, Edwin S; McGuire, Cian; Le, Steven Q; Kan, Shih-Hsin; Dickson, Patricia I; Schwartz, Philip H

    2015-01-01

    Mucopolysaccharidosis type I (MPS I) is an inherited α-L-iduronidase (IDUA, I) deficiency in which glycosaminoglycan (GAG) accumulation causes progressive multisystem organ dysfunction, neurological impairment, and death. Current MPS I mouse models, based on a NOD/SCID (NS) background, are short-lived, providing a very narrow window to assess the long-term efficacy of therapeutic interventions. They also develop thymic lymphomas, making the assessment of potential tumorigenicity of human stem cell transplantation problematic. We therefore developed a new MPS I model based on a NOD/SCID/Il2rγ (NSG) background. This model lives longer than 1 year and is tumor-free during that time. NSG MPS I (NSGI) mice exhibit the typical phenotypic features of MPS I including coarsened fur and facial features, reduced/abnormal gait, kyphosis, and corneal clouding. IDUA is undetectable in all tissues examined while GAG levels are dramatically higher in most tissues. NSGI brain shows a significant inflammatory response and prominent gliosis. Neurological MPS I manifestations are evidenced by impaired performance in behavioral tests. Human neural and hematopoietic stem cells were found to readily engraft, with human cells detectable for at least 1 year posttransplantation. This new MPS I model is thus suitable for preclinical testing of novel pluripotent stem cell-based therapy approaches.

  13. A novel, long-lived, and highly engraftable immunodeficient mouse model of mucopolysaccharidosis type I

    PubMed Central

    Mendez, Daniel C; Stover, Alexander E; Rangel, Anthony D; Brick, David J; Nethercott, Hubert E; Torres, Marissa A; Khalid, Omar; Wong, Andrew MS; Cooper, Jonathan D; Jester, James V; Monuki, Edwin S; McGuire, Cian; Le, Steven Q; Kan, Shih-hsin; Dickson, Patricia I; Schwartz, Philip H

    2015-01-01

    Mucopolysaccharidosis type I (MPS I) is an inherited α-L-iduronidase (IDUA, I) deficiency in which glycosaminoglycan (GAG) accumulation causes progressive multisystem organ dysfunction, neurological impairment, and death. Current MPS I mouse models, based on a NOD/SCID (NS) background, are short-lived, providing a very narrow window to assess the long-term efficacy of therapeutic interventions. They also develop thymic lymphomas, making the assessment of potential tumorigenicity of human stem cell transplantation problematic. We therefore developed a new MPS I model based on a NOD/SCID/Il2rγ (NSG) background. This model lives longer than 1 year and is tumor-free during that time. NSG MPS I (NSGI) mice exhibit the typical phenotypic features of MPS I including coarsened fur and facial features, reduced/abnormal gait, kyphosis, and corneal clouding. IDUA is undetectable in all tissues examined while GAG levels are dramatically higher in most tissues. NSGI brain shows a significant inflammatory response and prominent gliosis. Neurological MPS I manifestations are evidenced by impaired performance in behavioral tests. Human neural and hematopoietic stem cells were found to readily engraft, with human cells detectable for at least 1 year posttransplantation. This new MPS I model is thus suitable for preclinical testing of novel pluripotent stem cell-based therapy approaches. PMID:26052536

  14. Time course of affective bias in visual attention: convergent evidence from steady-state visual evoked potentials and behavioral data.

    PubMed

    Hindi Attar, Catherine; Andersen, Søren K; Müller, Matthias M

    2010-12-01

    Selective attention to a primary task can be biased by the occurrence of emotional distractors that involuntary attract attention due to their intrinsic stimulus significance. What is largely unknown is the time course and magnitude of competitive interactions between a to-be-attended foreground task and emotional distractors. We used pleasant, unpleasant and neutral pictures from the International Affective Picture System (IAPS) that were either presented in intact or phase-scrambled form. Pictures were superimposed by a flickering display of moving random dots, which constituted the primary task and enabled us to record steady-state visual evoked potentials (SSVEPs) as a continuous measure of attentional resource allocation directed to the task. Subjects were required to attend to the dots and to detect short intervals of coherent motion while ignoring the background pictures. We found that pleasant and unpleasant relative to neutral pictures more strongly influenced task-related processing as reflected in a significant decrease in SSVEP amplitudes and target detection rates, both covering a time window of several hundred milliseconds. Strikingly, the effect of semantic relative to phase-scrambled pictures on task-related activity was much larger, emerged earlier and lasted longer in time compared to the specific effect of emotion. The observed differences in size and duration of time courses of semantic and emotional picture processing strengthen the assumption of separate functional mechanisms for both processes rather than a general boosting of neural activity in favor of emotional stimulus processing. Copyright © 2010 Elsevier Inc. All rights reserved.

  15. Clinical recommendation for treatment planning of sinus augmentation procedures by using presurgical CAT scan images: a preliminary report.

    PubMed

    Kutkut, Ahmad M; Andreana, Sebastiano; Kim, Hyeong-Ll; Monaco, Edward

    2011-12-01

    To propose a clinical recommendation based on anatomy of maxillary sinus before sinus augmentation procedure using presurgical computerized axial tomography (CAT) scan images. CAT scan images were randomly selected from previous completed implant cases. Proposed area for the lateral window osteotomy was outlined on the panorex image of the CAT scan. Sagittal section on the CAT scan that was in the center of the outlined window was selected for sinus measurement analysis. On CAT scan, 2 lines were drawn to measure the dimensions of sinus. One line measured the horizontal width and the other line measured the vertical height. Based on the measurement data, a classification of the maxillary sinus anatomy was proposed. Narrow sinus cavity indicates favorable type anatomy in terms of bone regeneration healing and wide sinus cavity as less favorable anatomy for patient treatment planning. A narrow sinus and greater exposure to the blood supply should require shorter healing times after grafting. Conversely, wider sinus cavities and less exposure to the blood supply would require a longer healing time before implant placement.

  16. Extended design window of resonant plasma-wave transistor for terahertz emitter by considering degenerate carrier velocity model with Fermi-Dirac distribution

    NASA Astrophysics Data System (ADS)

    Park, Jong Yul; Kim, Sung-Ho; Rok Kim, Kyung

    2015-06-01

    In this work, we propose extended design window which is helpful to judge whether the plasma-wave transistor (PWT) operates as a resonant terahertz (THz) electromagnetic (EM) wave emitter. When metal-oxide-semiconductor field-effect transistor (MOSFET) is on strong inversion which is believed to be an operation regime of PWT THz emitter, Boltzmann statistics is no longer valid and degenerate Fermi-Dirac distribution should be considered. Based on degenerate carrier velocity model, we report the increased maximum channel length (Lmax) to 17 nm for strained silicon (s-Si) PWT with assuming μ = 500 cm2·V-1·s-1. As mobility is enhanced, it is possible to observe two emission spectrums [fundamental (N = 1) and third (N = 3) harmonics] in a specific operation range. Theoretically, increment of Lmax for enhanced μ is limited to near 35 nm by the Pauli’s principle in the case of s-Si PWT. This theoretical value of Lmax should be compromised by considering actual PWT operation voltage for gate oxide breakdown.

  17. Organic transistor memory with a charge storage molecular double-floating-gate monolayer.

    PubMed

    Tseng, Chiao-Wei; Huang, Ding-Chi; Tao, Yu-Tai

    2015-05-13

    A flexible, low-voltage, and nonvolatile memory device was fabricated by implanting a functional monolayer on an aluminum oxide dielectric surface in a pentacene-based organic transistor. The monolayer-forming molecule contains a phosphonic acid group as the anchoring moiety and a charge-trapping core group flanked between two alkyl chain spacers as the charge trapping site. The memory characteristics strongly depend on the monolayer used due to the localized charge-trapping capability for different core groups, including the diacetylenic (DA) unit as the hole carrier trap, the naphthalenetetracarboxyldiimide (ND) unit as the electron carrier trap, and the one with both DA and ND units present, respectively. The device with the monolayer carrying both DA and ND groups has a larger memory window than that for the one containing DA only and a longer retention time than that for the one containing DA or ND only, giving a memory window of 1.4 V and a retention time around 10(9) s. This device with hybrid organic monolayer/inorganic dielectrics also exhibited rather stable device characteristics upon bending of the polymeric substrate.

  18. Critical evaluation of round window membrane sealing in the treatment of idiopathic sudden unilateral hearing loss.

    PubMed

    Hoch, Stephan; Vomhof, Thomas; Teymoortash, Afshin

    2015-03-01

    Rupture of the round window membrane with consecutive development of a perilymphatic fistula (PLF) is still a matter of controversial debate in the pathogenesis of idiopathic sudden sensorineural hearing loss (SSHL). Until now no consensus exists about whether these patients benefit from performing an exploratory tympanotomy with sealing of the round window. The aim of the present study was to analyze critically the effectiveness of sealing the round window membrane in patients with SSHL. The clinical data of 51 patients with SSHL and a mean hearing decline of at least 60 dB over 5 frequencies who were treated with tympanotomy and sealing of the round window membrane were retrospectively analyzed. The results have been compared to the current state of the literature. Intraoperatively a round window membrane rupture or fluid leak was observed in none of the patients. After performing tympanotomy the mean improvement of hearing level was 32.7 dB. Twenty of 51 examined patients (39.2%) showed a mean improvement of the hearing level of more than 30 dB and a complete remission could be detected in 12 patients (23.5%). Reviewing the literature revealed no standard guidelines for definition or treatment of SSHL as well as for evaluation of hearing loss and its recovery. The results of the present study and the literature should be discussed critically. It is unclear whether tympanotomy and sealing of the round window membrane may be a meaningful treatment for SSHL. Therefore this procedure should be discussed as a therapeutic option only in selected patients with sudden deafness or profound hearing loss in which PLF is strongly suspicious or conservative treatment failed.

  19. Detection Times of Diazepam, Clonazepam, and Alprazolam in Oral Fluid Collected From Patients Admitted to Detoxification, After High and Repeated Drug Intake.

    PubMed

    Nordal, Kristin; Øiestad, Elisabeth L; Enger, Asle; Christophersen, Asbjorg S; Vindenes, Vigdis

    2015-08-01

    Clonazepam, diazepam, and alprazolam are benzodiazepines with sedative, anticonvulsant, and anxiolytic effects, but their prevalence in drug abuse and drug overdoses has long been recognized. When detection times for psychoactive drugs in oral fluid are reported, they are most often based on therapeutic doses administered in clinical studies. Repeated ingestions of high doses, as seen after drug abuse, are however likely to cause positive samples for extended time periods. Findings of drugs of abuse in oral fluid collected from imprisoned persons might lead to negative sanctions, and the knowledge of detection times of these drugs is thus important to ensure correct interpretation. The aim of this study was to investigate the time window of detection for diazepam, clonazepam, and alprazolam in oral fluid from drug addicts admitted to detoxification. Twenty-five patients with a history of heavy drug abuse admitted to a detoxification ward were included. Oral fluid was collected daily in the morning and the evening and urine samples every morning for 10 days, using the Intercept device. Whole blood samples were collected if the patient accepted. The cutoff levels in oral fluid were 1.3 ng/mL for diazepam, N-desmethyldiazepam, and 7-aminoclonazepam and 1 ng/mL for clonazepam and alprazolam. In urine, the cutoff levels for quantifications were 30 ng/mL for alprazolam, alpha-OH-alprazolam, and 7-aminoclonazepam, 135 ng/mL for N-desmethyldizepam, and 150 ng/mL for 3-OH-diazepam and for all the compounds, the cutoff for the screening analyses were 200 ng/mL. The maximum detection times for diazepam and N-desmethyldiazepam in oral fluid were 7 and 9 days, respectively. For clonazepam and 7-aminoclonazepam, the maximum detection times in oral fluid were 5 and 6 days, respectively. The maximum detection time for alprazolam in oral fluid was 2.5 days. New ingestions were not suspected in any of the cases, because the corresponding concentrations in urine were decreasing. Results from blood samples revealed that high doses of benzodiazepines had been ingested before admission, and explains the longer detection times in oral fluids than reported previously after intake of therapeutic doses of these drugs. This study has shown that oral fluid might be a viable alternative medium to urine when the abuse of benzodiazepines is suspected.

  20. Detection of clinical mastitis with sensor data from automatic milking systems is improved by using decision-tree induction.

    PubMed

    Kamphuis, C; Mollenhorst, H; Heesterbeek, J A P; Hogeveen, H

    2010-08-01

    The objective was to develop and validate a clinical mastitis (CM) detection model by means of decision-tree induction. For farmers milking with an automatic milking system (AMS), it is desirable that the detection model has a high level of sensitivity (Se), especially for more severe cases of CM, at a very high specificity (Sp). In addition, an alert for CM should be generated preferably at the quarter milking (QM) at which the CM infection is visible for the first time. Data were collected from 9 Dutch dairy herds milking automatically during a 2.5-yr period. Data included sensor data (electrical conductivity, color, and yield) at the QM level and visual observations of quarters with CM recorded by the farmers. Visual observations of quarters with CM were combined with sensor data of the most recent automatic milking recorded for that same quarter, within a 24-h time window before the visual assessment time. Sensor data of 3.5 million QM were collected, of which 348 QM were combined with a CM observation. Data were divided into a training set, including two-thirds of all data, and a test set. Cows in the training set were not included in the test set and vice versa. A decision-tree model was trained using only clear examples of healthy (n=24,717) or diseased (n=243) QM. The model was tested on 105 QM with CM and a random sample of 50,000 QM without CM. While keeping the Se at a level comparable to that of models currently used by AMS, the decision-tree model was able to decrease the number of false-positive alerts by more than 50%. At an Sp of 99%, 40% of the CM cases were detected. Sixty-four percent of the severe CM cases were detected and only 12.5% of the CM that were scored as watery milk. The Se increased considerably from 40% to 66.7% when the time window increased from less than 24h before the CM observation, to a time window from 24h before to 24h after the CM observation. Even at very wide time windows, however, it was impossible to reach an Se of 100%. This indicates the inability to detect all CM cases based on sensor data alone. Sensitivity levels varied largely when the decision tree was validated per herd. This trend was confirmed when decision trees were trained using data from 8 herds and tested on data from the ninth herd. This indicates that when using the decision tree as a generic CM detection model in practice, some herds will continue having difficulties in detecting CM using mastitis alert lists, whereas others will perform well. Copyright (c) 2010 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

  1. Solar Neutrino flare detection in Hyperkamiokande and SK

    NASA Astrophysics Data System (ADS)

    Fargion, Daniele

    2016-07-01

    The possible buid and near activity of a Megaton neutrino detection in HyperKamiokande and the older SK implementation by Gadolinium liqid might open to future detection of largest solar flare (pion trace at tens MeV) electron neutrino and antineutrino. The multiwave detection of X-gamma and neutrino event might offer a deep view of such solar acelleration and of neutrino flavor mix along its flight. The possoble near future discover of such events will open a third neutrino astronomy windows after rarest SN 1987A and persistent Solar nuclear signals.

  2. Physics process level discrimination of detections for GATE: assessment of contamination in SPECT and spurious activity in PET.

    PubMed

    De Beenhouwer, Jan; Staelens, Steven; Vandenberghe, Stefaan; Verhaeghe, Jeroen; Van Holen, Roel; Rault, Erwann; Lemahieu, Ignace

    2009-04-01

    The GEANT4 application for tomographic emission (GATE) is one of the most detailed Monte Carlo simulation tools for SPECT and PET. It allows for realistic phantoms, complex decay schemes, and a large variety of detector geometries. However, only a fraction of the information in each particle history is available for postprocessing. In order to extend the analysis capabilities of GATE, a flexible framework was developed. This framework allows all detected events to be subdivided according to their type: In PET, true coincidences from others, and in SPECT, geometrically collimated photons from others. The framework of the authors can be applied to any isotope, phantom, and detector geometry available in GATE. It is designed to enhance the usability of GATE for the study of contamination and for the investigation of the properties of current and future prototype detectors. The authors apply the framework to a case study of Bexxar, first assuming labeling with 124I, then with 131I. It is shown that with 124I PET, results with an optimized window improve upon those with the standard window but achieve less than half of the ideal improvement. Nevertheless, 124I PET shows improved resolution compared to 131I SPECT with triple-energy-window scatter correction.

  3. Cell segmentation in histopathological images with deep learning algorithms by utilizing spatial relationships.

    PubMed

    Hatipoglu, Nuh; Bilgin, Gokhan

    2017-10-01

    In many computerized methods for cell detection, segmentation, and classification in digital histopathology that have recently emerged, the task of cell segmentation remains a chief problem for image processing in designing computer-aided diagnosis (CAD) systems. In research and diagnostic studies on cancer, pathologists can use CAD systems as second readers to analyze high-resolution histopathological images. Since cell detection and segmentation are critical for cancer grade assessments, cellular and extracellular structures should primarily be extracted from histopathological images. In response, we sought to identify a useful cell segmentation approach with histopathological images that uses not only prominent deep learning algorithms (i.e., convolutional neural networks, stacked autoencoders, and deep belief networks), but also spatial relationships, information of which is critical for achieving better cell segmentation results. To that end, we collected cellular and extracellular samples from histopathological images by windowing in small patches with various sizes. In experiments, the segmentation accuracies of the methods used improved as the window sizes increased due to the addition of local spatial and contextual information. Once we compared the effects of training sample size and influence of window size, results revealed that the deep learning algorithms, especially convolutional neural networks and partly stacked autoencoders, performed better than conventional methods in cell segmentation.

  4. The short time Fourier transform and local signals

    NASA Astrophysics Data System (ADS)

    Okumura, Shuhei

    In this thesis, I examine the theoretical properties of the short time discrete Fourier transform (STFT). The STFT is obtained by applying the Fourier transform by a fixed-sized, moving window to input series. We move the window by one time point at a time, so we have overlapping windows. I present several theoretical properties of the STFT, applied to various types of complex-valued, univariate time series inputs, and their outputs in closed forms. In particular, just like the discrete Fourier transform, the STFT's modulus time series takes large positive values when the input is a periodic signal. One main point is that a white noise time series input results in the STFT output being a complex-valued stationary time series and we can derive the time and time-frequency dependency structure such as the cross-covariance functions. Our primary focus is the detection of local periodic signals. I present a method to detect local signals by computing the probability that the squared modulus STFT time series has consecutive large values exceeding some threshold after one exceeding observation following one observation less than the threshold. We discuss a method to reduce the computation of such probabilities by the Box-Cox transformation and the delta method, and show that it works well in comparison to the Monte Carlo simulation method.

  5. g-PRIME: A Free, Windows Based Data Acquisition and Event Analysis Software Package for Physiology in Classrooms and Research Labs.

    PubMed

    Lott, Gus K; Johnson, Bruce R; Bonow, Robert H; Land, Bruce R; Hoy, Ronald R

    2009-01-01

    We present g-PRIME, a software based tool for physiology data acquisition, analysis, and stimulus generation in education and research. This software was developed in an undergraduate neurophysiology course and strongly influenced by instructor and student feedback. g-PRIME is a free, stand-alone, windows application coded and "compiled" in Matlab (does not require a Matlab license). g-PRIME supports many data acquisition interfaces from the PC sound card to expensive high throughput calibrated equipment. The program is designed as a software oscilloscope with standard trigger modes, multi-channel visualization controls, and data logging features. Extensive analysis options allow real time and offline filtering of signals, multi-parameter threshold-and-window based event detection, and two-dimensional display of a variety of parameters including event time, energy density, maximum FFT frequency component, max/min amplitudes, and inter-event rate and intervals. The software also correlates detected events with another simultaneously acquired source (event triggered average) in real time or offline. g-PRIME supports parameter histogram production and a variety of elegant publication quality graphics outputs. A major goal of this software is to merge powerful engineering acquisition and analysis tools with a biological approach to studies of nervous system function.

  6. Preparing ZEUS-2 for Observing Run at the APEX Telescope

    NASA Astrophysics Data System (ADS)

    Dahlin, Patrick; Vishwas, Amit; Nikola, Thomas; Stacey, Gordon J.

    2017-01-01

    ZEUS-2 is a direct detection grating spectrometer that was designed to maximize sensitivity for the detection of the far-infrared fine-structure lines from distant star forming galaxies as they are redshifted into the short submillimeter windows. ZEUS-2 employs two NIST TES bolometer arrays as its detector: one tuned to 400 μm and the other that consists of two sub-arrays, one tuned to 215 μm and the other tuned to 645 μm. Therefore, by placing bandpass filters directly above the detector ZEUS-2 can address four telluric windows (200 μm, 350 μm, 450 μm, and 650 μm) simultaneously on extended objects, and two windows (200 and 650 μm, or 350 and 450 μm) simultaneously on point sources. ZEUS-2 has now been deployed four times on the APEX telescope in Chile and demonstrated background limited performance both at 350 and 450 μm. As part of my NSF REU experience at Cornell in the summer of 2016, I helped with testing of ZEUS-2 in the lab and improving components for its use on the telescope. This poster will cover the principles of the ZEUS-2 instrument and some of the recent scientific results.

  7. Swift J1658.2-4242: Possible pulsar periodicity detected

    NASA Astrophysics Data System (ADS)

    Kennea, J. A.

    2018-02-01

    We report on analysis of all the current Windowed Timing mode data taken on the newly discovered Galactic Transient, Swift J1658.2-4242 (GCN #22416, GCN #22417, GCN #22419, ATEL #11310, ATEL #11306, ATEL #11307).

  8. A Design of Finite Memory Residual Generation Filter for Sensor Fault Detection

    NASA Astrophysics Data System (ADS)

    Kim, Pyung Soo

    2017-04-01

    In the current paper, a residual generation filter with finite memory structure is proposed for sensor fault detection. The proposed finite memory residual generation filter provides the residual by real-time filtering of fault vector using only the most recent finite measurements and inputs on the window. It is shown that the residual given by the proposed residual generation filter provides the exact fault for noisefree systems. The proposed residual generation filter is specified to the digital filter structure for the amenability to hardware implementation. Finally, to illustrate the capability of the proposed residual generation filter, extensive simulations are performed for the discretized DC motor system with two types of sensor faults, incipient soft bias-type fault and abrupt bias-type fault. In particular, according to diverse noise levels and windows lengths, meaningful simulation results are given for the abrupt bias-type fault.

  9. The Effect of Life History on Retroviral Genome Invasions

    PubMed Central

    Kanda, Ravinder K.; Coulson, Tim

    2015-01-01

    Endogenous retroviruses (ERV), or the remnants of past retroviral infections that are no longer active, are found in the genomes of most vertebrates, typically constituting approximately 10% of the genome. In some vertebrates, particularly in shorter-lived species like rodents, it is not unusual to find active endogenous retroviruses. In longer-lived species, including humans where substantial effort has been invested in searching for active ERVs, it is unusual to find them; to date none have been found in humans. Presumably the chance of detecting an active ERV infection is a function of the length of an ERV epidemic. Intuitively, given that ERVs or signatures of past ERV infections are passed from parents to offspring, we might expect to detect more active ERVs in species with longer generation times, as it should take more years for an infection to run its course in longer than in shorter lived species. This means the observation of more active ERV infections in shorter compared to longer-lived species is paradoxical. We explore this paradox using a modeling approach to investigate factors that influence ERV epidemic length. Our simple epidemiological model may explain why we find evidence of active ERV infections in shorter rather than longer-lived species. PMID:25692467

  10. Non-specific monitoring to resolve intermittent pollutant problems associated with wastewater treatment and potable supply.

    PubMed

    Stuetz, R M

    2004-01-01

    An online monitoring system based on an array of non-specific sensors was used for the detection of chemical pollutants in wastewater and water. By superimposing sensor profiles for defined sampling window, the identification of data points outside these normal sensor response patterns was used to represent potential pollution episodes or other abnormalities within the process stream. Principle component analysis supported the detection of outliers or rapid changes in the sensor responses as an indicator of chemical pollutants. A model based on the comparison of sensor relative responses to a moving average for a defined sample window was tested for detecting and identifying sudden changes in the online data over a 6-month period. These results show the technical advantages of using a non-specific based monitoring system that can respond to a range of chemical species, due to broad selectivity of the sensor compositions. The findings demonstrate how this non-invasive technique could be further developed to provide early warning systems for application at the inlet of wastewater treatment plants.

  11. Car glass microphones using piezoelectric transducers for external alarm detection and localization

    NASA Astrophysics Data System (ADS)

    Bolzmacher, Christian; Le Guelvouit, Valentin

    2015-05-01

    This work describes the potential use of car windows as a long range acoustic sensing device for external alarm signals. The goal is to detect and localize siren signals (e.g. ambulances and police cars) and to alert presbycusic drivers of its presence by visual and acoustic feedback in order to improve individual mobility and increase the sense of security. The glass panes of a Renault Zoé operating as an acoustic antenna have been equipped with large 50 mm outer diameter piezoceramic rings, hidden in the lower part of the door structure and the lower part of the windshield and the rear window. The response of the glass to quasi-static signals and sweep excitation has been recorded. In general, the glass pane is acting as a high pass filter due to its inherent stiffness and provides only little damping. This effect is compensated by using a charge amplifier electronic circuit. The detection capability up to 120 m as well as a dynamic test where the car is moving towards the sound source is reported.

  12. Breast cancer mitosis detection in histopathological images with spatial feature extraction

    NASA Astrophysics Data System (ADS)

    Albayrak, Abdülkadir; Bilgin, Gökhan

    2013-12-01

    In this work, cellular mitosis detection in histopathological images has been investigated. Mitosis detection is very expensive and time consuming process. Development of digital imaging in pathology has enabled reasonable and effective solution to this problem. Segmentation of digital images provides easier analysis of cell structures in histopathological data. To differentiate normal and mitotic cells in histopathological images, feature extraction step is very crucial step for the system accuracy. A mitotic cell has more distinctive textural dissimilarities than the other normal cells. Hence, it is important to incorporate spatial information in feature extraction or in post-processing steps. As a main part of this study, Haralick texture descriptor has been proposed with different spatial window sizes in RGB and La*b* color spaces. So, spatial dependencies of normal and mitotic cellular pixels can be evaluated within different pixel neighborhoods. Extracted features are compared with various sample sizes by Support Vector Machines using k-fold cross validation method. According to the represented results, it has been shown that separation accuracy on mitotic and non-mitotic cellular pixels gets better with the increasing size of spatial window.

  13. Development of an EMCCD for lidar applications

    NASA Astrophysics Data System (ADS)

    De Monte, B.; Bell, R. T.

    2017-11-01

    A novel detector, incorporating e2v's L3 CCD (L3Vision™) [1] technology for use in LIDAR (Light Detection And Ranging) applications has been designed, manufactured and characterised. The most critical performance aspect was the requirement to collect charge from a 120μm square detection area for a 667ns temporal sampling window, with low crosstalk between successive samples, followed by signal readout with sub-electron effective noise. Additional requirements included low dark signal, high quantum efficiency at the 355nm laser wavelength and the ability to handle bright laser echoes, without corruption of the much fainter useful signals. The detector architecture used high speed charge binning to combine signal from each sampling window into a single charge packet. This was then passed through a multiplication register (Electron Multiplying Charge Coupled Device) operating with a typical gain of 100X to a conventional charge detection circuit. The detector achieved a typical quantum efficiency of 80% and a total noise in darkness of < 0.5 electrons rms. Development of the detector was supported by ESA (European Space Agency).

  14. Artificial Intelligence Methods Applied to Parameter Detection of Atrial Fibrillation

    NASA Astrophysics Data System (ADS)

    Arotaritei, D.; Rotariu, C.

    2015-09-01

    In this paper we present a novel method to develop an atrial fibrillation (AF) based on statistical descriptors and hybrid neuro-fuzzy and crisp system. The inference of system produce rules of type if-then-else that care extracted to construct a binary decision system: normal of atrial fibrillation. We use TPR (Turning Point Ratio), SE (Shannon Entropy) and RMSSD (Root Mean Square of Successive Differences) along with a new descriptor, Teager- Kaiser energy, in order to improve the accuracy of detection. The descriptors are calculated over a sliding window that produce very large number of vectors (massive dataset) used by classifier. The length of window is a crisp descriptor meanwhile the rest of descriptors are interval-valued type. The parameters of hybrid system are adapted using Genetic Algorithm (GA) algorithm with fitness single objective target: highest values for sensibility and sensitivity. The rules are extracted and they are part of the decision system. The proposed method was tested using the Physionet MIT-BIH Atrial Fibrillation Database and the experimental results revealed a good accuracy of AF detection in terms of sensitivity and specificity (above 90%).

  15. Sensitivity and Specificity of Emergency Physicians and Trainees for Identifying Internally Concealed Drug Packages on Abdominal Computed Tomography Scan: Do Lung Windows Improve Accuracy?

    PubMed

    Asha, Stephen Edward; Cooke, Andrew

    2015-09-01

    Suspected body packers may be brought to emergency departments (EDs) close to international airports for abdominal computed tomography (CT) scanning. Senior emergency clinicians may be asked to interpret these CT scans. Missing concealed drug packages have important clinical and forensic implications. The accuracy of emergency clinician interpretation of abdominal CT scans for concealed drugs is not known. Limited evidence suggests that accuracy for identification of concealed packages can be increased by viewing CT images on "lung window" settings. To determine the accuracy of senior emergency clinicians in interpreting abdominal CT scans for concealed drugs, and to determine if this accuracy was improved by viewing scans on both abdominal and lung window settings. Emergency clinicians blinded to all patient identifiers and the radiology report interpreted CT scans of suspected body packers using standard abdominal window settings and then with the addition of lung window settings. The reference standard was the radiologist's report. Fifty-five emergency clinicians reported 235 CT scans. The sensitivity, specificity, and accuracy of interpretation using abdominal windows was 89.9% (95% confidence interval [CI] 83.0-94.7), 81.9% (95% CI 73.7-88.4), and 86.0% (95% CI 81.5-90.4), respectively, and with both window settings was 94.1% (95% CI 88.3-97.6), 76.7% (95% CI 68.0-84.1), 85.5% (95% CI 81.0-90.0), respectively. Diagnostic accuracy was similar regardless of the clinician's experience. Interrater reliability was moderate (kappa 0.46). The accuracy of interpretation of abdominal CT scans performed for the purpose of detecting concealed drug packages by emergency clinicians is not high enough to safely discharge these patients from the ED. The use of lung windows improved sensitivity, but at the expense of specificity. Crown Copyright © 2015. Published by Elsevier Inc. All rights reserved.

  16. Testing a simplified method for measuring velocity integration in saccades using a manipulation of target contrast.

    PubMed

    Etchells, Peter J; Benton, Christopher P; Ludwig, Casimir J H; Gilchrist, Iain D

    2011-01-01

    A growing number of studies in vision research employ analyses of how perturbations in visual stimuli influence behavior on single trials. Recently, we have developed a method along such lines to assess the time course over which object velocity information is extracted on a trial-by-trial basis in order to produce an accurate intercepting saccade to a moving target. Here, we present a simplified version of this methodology, and use it to investigate how changes in stimulus contrast affect the temporal velocity integration window used when generating saccades to moving targets. Observers generated saccades to one of two moving targets which were presented at high (80%) or low (7.5%) contrast. In 50% of trials, target velocity stepped up or down after a variable interval after the saccadic go signal. The extent to which the saccade endpoint can be accounted for as a weighted combination of the pre- or post-step velocities allows for identification of the temporal velocity integration window. Our results show that the temporal integration window takes longer to peak in the low when compared to high contrast condition. By enabling the assessment of how information such as changes in velocity can be used in the programming of a saccadic eye movement on single trials, this study describes and tests a novel methodology with which to look at the internal processing mechanisms that transform sensory visual inputs into oculomotor outputs.

  17. Radiological Study of the Carotid-Clival Window and Its Application in Endoscopic Endonasal Expanded Approaches.

    PubMed

    Pérez de San Román-Mena, Laila; Simal-Julián, Juan Antonio; Miranda-Lloret, Pablo; Sanromán-Álvarez, Pablo; Botella-Asunción, Carlos

    2017-08-01

    The surgical approach to the petrous apex (PA) and petroclival junction (PCJ) remains a challenge. The carotid-clival window (CCW) represents the widest window available to approach the PCJ from a mediolateral endoscopic route. Here we define the CCW radiologically in nonpathological conditions, to establish the anatomic variability of the PCJ, relate this variability to pneumatization patterns, and evaluate some technical concerns conditioned by the CCW. This was an analytical study of 10 multislice computed tomography scans from patients without SB pathology. Bilateral measures were taken at the roof and floor levels of the lacerum canal (LC) and its posterior projection over the PCJ (segments DE and QR). All measures were compared across different pneumatization patterns. The DE and QR lengths were found to be the most important measures affecting the width of the CCW. Wide variability was observed, with a mean DE length of 8.52 mm (range, 2.4-12.8 mm) at the LC floor level and a mean QR length of 9.11 mm (range, 4.3-13.1 mm) at the LC roof level. The presence of retrocarotid pneumatization was statistically significantly associated with longer DE and QR segments. No differences were found among other pneumatization patterns. The CCW varies widely among individuals. The presence of pneumatization behind the paraclival carotid represents an advantageous characteristic when planning an endoscopic approach to the PCJ. Copyright © 2017 Elsevier Inc. All rights reserved.

  18. Does apparent size capture attention in visual search? Evidence from the Muller-Lyer illusion.

    PubMed

    Proulx, Michael J; Green, Monique

    2011-11-23

    Is perceived size a crucial factor for the bottom-up guidance of attention? Here, a visual search experiment was used to examine whether an irrelevantly longer object can capture attention when participants were to detect a vertical target item. The longer object was created by an apparent size manipulation, the Müller-Lyer illusion; however, all objects contained the same number of pixels. The vertical target was detected more efficiently when it was also perceived as the longer item that was defined by apparent size. Further analysis revealed that the longer Müller-Lyer object received a greater degree of attentional priority than published results for other features such as retinal size, luminance contrast, and the abrupt onset of a new object. The present experiment has demonstrated for the first time that apparent size can capture attention and, thus, provide bottom-up guidance on the basis of perceived salience.

  19. Real-time person detection in low-resolution thermal infrared imagery with MSER and CNNs

    NASA Astrophysics Data System (ADS)

    Herrmann, Christian; Müller, Thomas; Willersinn, Dieter; Beyerer, Jürgen

    2016-10-01

    In many camera-based systems, person detection and localization is an important step for safety and security applications such as search and rescue, reconnaissance, surveillance, or driver assistance. Long-wave infrared (LWIR) imagery promises to simplify this task because it is less affected by background clutter or illumination changes. In contrast to a lot of related work, we make no assumptions about any movement of persons or the camera, i.e. persons may stand still and the camera may move or any combination thereof. Furthermore, persons may appear arbitrarily in near or far distances to the camera leading to low-resolution persons in far distances. To address this task, we propose a two-stage system, including a proposal generation method and a classifier to verify, if the detected proposals really are persons. In contradiction to use all possible proposals as with sliding window approaches, we apply Maximally Stable Extremal Regions (MSER) and classify the detected proposals afterwards with a Convolutional Neural Network (CNN). The MSER algorithm acts as a hot spot detector when applied to LWIR imagery. Because the body temperature of persons is usually higher than the background, they appear as hot spots in the image. However, the MSER algorithm is unable to distinguish between different kinds of hot spots. Thus, all further LWIR sources such as windows, animals or vehicles will be detected, too. Still by applying MSER, the number of proposals is reduced significantly in comparison to a sliding window approach which allows employing the high discriminative capabilities of deep neural networks classifiers that were recently shown in several applications such as face recognition or image content classification. We suggest using a CNN as classifier for the detected hot spots and train it to discriminate between person hot spots and all further hot spots. We specifically design a CNN that is suitable for the low-resolution person hot spots that are common with LWIR imagery applications and is capable of fast classification. Evaluation on several different LWIR person detection datasets shows an error rate reduction of up to 80 percent compared to previous approaches consisting of MSER, local image descriptors and a standard classifier such as an SVM or boosted decision trees. Further time measurements show that the proposed processing chain is capable of real-time person detection in LWIR camera streams.

  20. Large Area Flat Panel Imaging Detectors for Astronomy and Night Time Sensing

    NASA Astrophysics Data System (ADS)

    Siegmund, O.; McPhate, J.; Frisch, H.; Elam, J.; Mane, A.; Wagner, R.; Varner, G.

    2013-09-01

    Sealed tube photo-sensing detectors for optical/IR detection have applications in astronomy, nighttime remote reconnaissance, and airborne/space situational awareness. The potential development of large area photon counting, imaging, timing detectors has significance for these applications and a number of other areas (High energy particle detection (RICH), biological single-molecule fluorescence lifetime imaging microscopy, neutron imaging, time of flight mass spectroscopy, diffraction imaging). We will present details of progress towards the development of a 20 cm sealed tube optical detector with nanoengineered microchannel plates for photon counting, imaging and sub-ns event time stamping. In the operational scheme of the photodetector incoming light passes through an entrance window and interacts with a semitransparent photocathode on the inside of the window. The photoelectrons emitted are accelerated across a proximity gap and are detected by an MCP pair. The pair of novel borosilicate substrate MCPs are functionalized by atomic layer deposition (ALD), and amplify the signal and the resulting electron cloud is detected by a conductive strip line anode for determination of the event positions and the time of arrival. The physical package is ~ 25 x 25 cm but only 1.5 cm thick. Development of such a device in a square 20 cm format presents challenges: hermetic sealing to a large entrance window, a 20 cm semitransparent photocathode with good efficiency and uniformity, 20 cm MCPs with reasonable cost and performance, robust construction to preserve high vacuum and withstand an atmosphere pressure differential. We will discuss the schemes developed to address these issues and present the results for the first test devices. The novel microchannel plates employing borosilicate micro-capillary arrays provide many performance characteristics typical of conventional MCPs, but have been made in sizes up to 20 cm, have low intrinsic background (0.08 events cm2 s-1) and have very stable gain behavior over > 7 C cm2 of charge extracted. They are high temperature compatible and have minimal outgassing, which shortens and simplifies the sealed tube production process and should improve overall lifetimes. Bialkali (NaKSb) semitransparent photocathodes with > 20% quantum efficiency have also been made on 20 cm borosilicate windows compatible with the window seals for the large sealed tube device. The photocathodes have good response uniformity and have been stable for > 5 months in testing. Tests with a 20 cm detector with a cross delay line readout have achieved ~50µm FWHM imaging with single photon sub-ns timing and MHz event rates, and tests with a 10 x 10cm detector with cross strip readout has achieved ~20µm FWHM imaging with >4 MHz event rates with ~10% deadtime. We will discuss the details and implications of these novel detector implementations and their potential applications.

  1. Comparison of Outcomes of Pericardiocentesis Versus Surgical Pericardial Window in Patients Requiring Drainage of Pericardial Effusions.

    PubMed

    Horr, Samuel E; Mentias, Amgad; Houghtaling, Penny L; Toth, Andrew J; Blackstone, Eugene H; Johnston, Douglas R; Klein, Allan L

    2017-09-01

    Comparative outcomes of patients undergoing pericardiocentesis or pericardial window are limited. Development of pericardial effusion after cardiac surgery is common but no data exist to guide best management. Procedural billing codes and Cleveland Clinic surgical registries were used to identify 1,281 patients who underwent either pericardiocentesis or surgical pericardial window between January 2000 and December 2012. The 656 patients undergoing an intervention for a pericardial effusion secondary to cardiac surgery were also compared. Propensity scoring was used to identify well-matched patients in each group. In the overall cohort, in-hospital mortality was similar between the group undergoing pericardiocentesis and surgical drainage (5.3% vs 4.4%, p = 0.49). Similar outcomes were found in the propensity-matched group (4.9% vs 6.1%, p = 0.55). Re-accumulation was more common after pericardiocentesis (24% vs 10%, p <0.0001) and remained in the matched cohorts (23% vs 9%, p <0.0001). The secondary outcome of hemodynamic instability after the procedure was more common in the pericardial window group in both the unmatched (5.2% vs 2.9%, p = 0.036) and matched cohorts (6.1% vs 2.0%, p = 0.022). In the subgroup of patients with a pericardial effusion secondary to cardiac surgery, there was a lower mortality after pericardiocentesis in the unmatched group (1.5% vs 4.6%, p = 0.024); however, after adjustment, this difference in mortality was no longer present (2.6% vs 4.5%, p = 0.36). In conclusion, both pericardiocentesis and surgical pericardial window are safe and effective treatment strategies for the patient with a pericardial effusion. In our study there were no significant differences in mortality in patients undergoing either procedure. Observed differences in outcomes with regard to recurrence rates, hemodynamic instability, and in those with postcardiac surgery effusions may help to guide the clinician in management of the patient requiring therapeutic or diagnostic drainage of a pericardial effusion. Copyright © 2017 Elsevier Inc. All rights reserved.

  2. Improvements to the modal holographic wavefront sensor.

    PubMed

    Kong, Fanpeng; Lambert, Andrew

    2016-05-01

    The Zernike coefficients of a light wavefront can be calculated directly by intensity ratios of pairs of spots in the reconstructed image plane of a holographic wavefront sensor (HWFS). However, the response curve of the HWFS heavily depends on the position and size of the detector for each spot and the distortions introduced by other aberrations. In this paper, we propose a method to measure the intensity of each spot by setting a threshold to select effective pixels and using the weighted average intensity within a selected window. Compared with using the integral intensity over a small window for each spot, we show through a numerical simulation that the proposed method reduces the dependency of the HWFS's response curve on the selection of the detector window. We also recorded a HWFS on a holographic plate using a blue laser and demonstrated its capability to detect the strength of encoded Zernike terms in an aberrated beam.

  3. Time-resolved two-window measurement of Wigner functions for coherent backscatter from a turbid medium

    NASA Astrophysics Data System (ADS)

    Reil, Frank; Thomas, John E.

    2002-05-01

    For the first time we are able to observe the time-resolved Wigner function of enhanced backscatter from a random medium using a novel two-window technique. This technique enables us to directly verify the phase-conjugating properties of random media. An incident divergent beam displays a convergent enhanced backscatter cone. We measure the joint position and momentum (x, p) distributions of the light field as a function of propagation time in the medium. The two-window technique allows us to independently control the resolutions for position and momentum, thereby surpassing the uncertainty limit associated with Fourier transform pairs. By using a low-coherence light source in a heterodyne detection scheme, we observe enhanced backscattering resolved by path length in the random medium, providing information about the evolution of optical coherence as a function of penetration depth in the random medium.

  4. Blurred image restoration using knife-edge function and optimal window Wiener filtering.

    PubMed

    Wang, Min; Zhou, Shudao; Yan, Wei

    2018-01-01

    Motion blur in images is usually modeled as the convolution of a point spread function (PSF) and the original image represented as pixel intensities. The knife-edge function can be used to model various types of motion-blurs, and hence it allows for the construction of a PSF and accurate estimation of the degradation function without knowledge of the specific degradation model. This paper addresses the problem of image restoration using a knife-edge function and optimal window Wiener filtering. In the proposed method, we first calculate the motion-blur parameters and construct the optimal window. Then, we use the detected knife-edge function to obtain the system degradation function. Finally, we perform Wiener filtering to obtain the restored image. Experiments show that the restored image has improved resolution and contrast parameters with clear details and no discernible ringing effects.

  5. Blurred image restoration using knife-edge function and optimal window Wiener filtering

    PubMed Central

    Zhou, Shudao; Yan, Wei

    2018-01-01

    Motion blur in images is usually modeled as the convolution of a point spread function (PSF) and the original image represented as pixel intensities. The knife-edge function can be used to model various types of motion-blurs, and hence it allows for the construction of a PSF and accurate estimation of the degradation function without knowledge of the specific degradation model. This paper addresses the problem of image restoration using a knife-edge function and optimal window Wiener filtering. In the proposed method, we first calculate the motion-blur parameters and construct the optimal window. Then, we use the detected knife-edge function to obtain the system degradation function. Finally, we perform Wiener filtering to obtain the restored image. Experiments show that the restored image has improved resolution and contrast parameters with clear details and no discernible ringing effects. PMID:29377950

  6. Evaluating the effect of aging on interference resolution with time-varying complex networks analysis

    PubMed Central

    Ariza, Pedro; Solesio-Jofre, Elena; Martínez, Johann H.; Pineda-Pardo, José A.; Niso, Guiomar; Maestú, Fernando; Buldú, Javier M.

    2015-01-01

    In this study we used graph theory analysis to investigate age-related reorganization of functional networks during the active maintenance of information that is interrupted by external interference. Additionally, we sought to investigate network differences before and after averaging network parameters between both maintenance and interference windows. We compared young and older adults by measuring their magnetoencephalographic recordings during an interference-based working memory task restricted to successful recognitions. Data analysis focused on the topology/temporal evolution of functional networks during both the maintenance and interference windows. We observed that: (a) Older adults require higher synchronization between cortical brain sites in order to achieve a successful recognition, (b) The main differences between age groups arise during the interference window, (c) Older adults show reduced ability to reorganize network topology when interference is introduced, and (d) Averaging network parameters leads to a loss of sensitivity to detect age differences. PMID:26029079

  7. Fast Color Grouping and Slow Color Inhibition: Evidence for Distinct Temporal Windows for Separate Processes in Preview Search

    ERIC Educational Resources Information Center

    Braithwaite, Jason J.; Humphreys, Glyn W.; Hulleman, Johan; Watson, Derrick G.

    2007-01-01

    The authors report 4 experiments that examined color grouping and negative carryover effects in preview search via a probe detection task (J. J. Braithwaite, G. W. Humphreys, & J. Hodsoll, 2003). In Experiment 1, there was evidence of a negative color carryover from the preview to new items, using both search and probe detection measures. There…

  8. Using electrolyte leakage tests to determine lifting windows and detect tissue damage

    Treesearch

    Richard W. Tinus

    2002-01-01

    Physiological testing is rapidly coming into use as a means to determine the condition of nursery stock and predict how it will respond to treatment or use. One such test, the electrolyte leakage test, can be used to measure cold hardiness and detect tissue damage. The principle of this test is that when cell membranes are damaged, electrolytes leak out into the water...

  9. Evaluation of various energy windows at different radionuclides for scatter and attenuation correction in nuclear medicine.

    PubMed

    Asgari, Afrouz; Ashoor, Mansour; Sohrabpour, Mostafa; Shokrani, Parvaneh; Rezaei, Ali

    2015-05-01

    Improving signal to noise ratio (SNR) and qualified images by the various methods is very important for detecting the abnormalities at the body organs. Scatter and attenuation of photons by the organs lead to errors in radiopharmaceutical estimation as well as degradation of images. The choice of suitable energy window and the radionuclide have a key role in nuclear medicine which appearing the lowest scatter fraction as well as having a nearly constant linear attenuation coefficient as a function of phantom thickness. The energy windows of symmetrical window (SW), asymmetric window (ASW), high window (WH) and low window (WL) using Tc-99m and Sm-153 radionuclide with solid water slab phantom (RW3) and Teflon bone phantoms have been compared, and Matlab software and Monte Carlo N-Particle (MCNP4C) code were modified to simulate these methods and obtaining the amounts of FWHM and full width at tenth maximum (FWTM) using line spread functions (LSFs). The experimental data were obtained from the Orbiter Scintron gamma camera. Based on the results of the simulation as well as experimental work, the performance of WH and ASW display of the results, lowest scatter fraction as well as constant linear attenuation coefficient as a function of phantom thickness. WH and ASW were optimal windows in nuclear medicine imaging for Tc-99m in RW3 phantom and Sm-153 in Teflon bone phantom. Attenuation correction was done for WH and ASW optimal windows and for these radionuclides using filtered back projection algorithm. Results of simulation and experimental show that very good agreement between the set of experimental with simulation as well as theoretical values with simulation data were obtained which was nominally less than 7.07 % for Tc-99m and less than 8.00 % for Sm-153. Corrected counts were not affected by the thickness of scattering material. The Simulated results of Line Spread Function (LSF) for Sm-153 and Tc-99m in phantom based on four windows and TEW method were indicated that the FWHM and FWTM values were approximately the same in TEW method and WH and ASW, but the sensitivity at the optimal window was more than that of the other one. The suitable determination of energy window width on the energy spectra can be useful in optimal design to improve efficiency and contrast. It is found that the WH is preferred to the ASW and the ASW is preferred to the SW.

  10. Ground and satellite-based remote sensing of mineral dust using AERI spectra and MODIS thermal infrared window brightness temperatures

    NASA Astrophysics Data System (ADS)

    Hansell, Richard Allen, Jr.

    The radiative effects of dust aerosol on our climate system have yet to be fully understood and remain a topic of contemporary research. To investigate these effects, detection/retrieval methods for dust events over major dust outbreak and transport areas have been developed using satellite and ground-based approaches. To this end, both the shortwave and longwave surface radiative forcing of dust aerosol were investigated. The ground-based remote sensing approach uses the Atmospheric Emitted Radiance Interferometer brightness temperature spectra to detect mineral dust events and to retrieve their properties. Taking advantage of the high spectral resolution of the AERI instrument, absorptive differences in prescribed thermal IR window sub-band channels were exploited to differentiate dust from cirrus clouds. AERI data collected during the UAE2 at Al-Ain UAE was employed for dust retrieval. Assuming a specified dust composition model a priori and using the light scattering programs of T-matrix and the finite difference time domain methods for oblate spheroids and hexagonal plates, respectively, dust optical depths have been retrieved and compared to those inferred from a collocated and coincident AERONET sun-photometer dataset. The retrieved optical depths were then used to determine the dust longwave surface forcing during the UAE2. Likewise, dust shortwave surface forcing is investigated employing a differential technique from previous field studies. The satellite-based approach uses MODIS thermal infrared brightness temperature window data for the simultaneous detection/separation of mineral dust and cirrus clouds. Based on the spectral variability of dust emissivity at the 3.75, 8.6, 11 and 12 mum wavelengths, the D*-parameter, BTD-slope and BTD3-11 tests are combined to identify dust and cirrus. MODIS data for the three dust-laden scenes have been analyzed to demonstrate the effectiveness of this detection/separation method. Detected daytime dust and cloud coverage for the Persian Gulf case compare reasonably well to those from the "Deep Blue" algorithm developed at NASA-GSFC. The nighttime dust/cloud detection for the cases surrounding Cape Verde and Niger, West Africa has been validated by comparing to coincident and collocated ground-based micro-pulse lidar measurements.

  11. Experimental analysis of oligonucleotide microarray design criteria to detect deletions by comparative genomic hybridization.

    PubMed

    Flibotte, Stephane; Moerman, Donald G

    2008-10-21

    Microarray comparative genomic hybridization (CGH) is currently one of the most powerful techniques to measure DNA copy number in large genomes. In humans, microarray CGH is widely used to assess copy number variants in healthy individuals and copy number aberrations associated with various diseases, syndromes and disease susceptibility. In model organisms such as Caenorhabditis elegans (C. elegans) the technique has been applied to detect mutations, primarily deletions, in strains of interest. Although various constraints on oligonucleotide properties have been suggested to minimize non-specific hybridization and improve the data quality, there have been few experimental validations for CGH experiments. For genomic regions where strict design filters would limit the coverage it would also be useful to quantify the expected loss in data quality associated with relaxed design criteria. We have quantified the effects of filtering various oligonucleotide properties by measuring the resolving power for detecting deletions in the human and C. elegans genomes using NimbleGen microarrays. Approximately twice as many oligonucleotides are typically required to be affected by a deletion in human DNA samples in order to achieve the same statistical confidence as one would observe for a deletion in C. elegans. Surprisingly, the ability to detect deletions strongly depends on the oligonucleotide 15-mer count, which is defined as the sum of the genomic frequency of all the constituent 15-mers within the oligonucleotide. A similarity level above 80% to non-target sequences over the length of the probe produces significant cross-hybridization. We recommend the use of a fairly large melting temperature window of up to 10 degrees C, the elimination of repeat sequences, the elimination of homopolymers longer than 5 nucleotides, and a threshold of -1 kcal/mol on the oligonucleotide self-folding energy. We observed very little difference in data quality when varying the oligonucleotide length between 50 and 70, and even when using an isothermal design strategy. We have determined experimentally the effects of varying several key oligonucleotide microarray design criteria for detection of deletions in C. elegans and humans with NimbleGen's CGH technology. Our oligonucleotide design recommendations should be applicable for CGH analysis in most species.

  12. Early Detection of Human Focal Seizures Based on Cortical Multiunit Activity

    PubMed Central

    Park, Yun S.; Hochberg, Leigh R.; Eskandar, Emad N.; Cash, Sydney S.; Truccolo, Wilson

    2014-01-01

    Approximately 50 million people in the world suffer from epileptic seizures. Reliable early seizure detection could bring significantly beneficial therapeutic alternatives. In recent decades, most approaches have relied on scalp EEG and intracranial EEG signals, but practical early detection for closed-loop seizure control remains challenging. In this study, we present preliminary analyses of an early detection approach based on intracortical neuronal multiunit activity (MUA) recorded from a 96-microelectrode array (MEA). The approach consists of (1) MUA detection from broadband field potentials recorded at 30 kHz by the MEA; (2) MUA feature extraction; (3) cost-sensitive support vector machine classification of ictal and interictal samples; and (4) Kalman-filtering postprocessing. MUA was here defined as the number of threshold crossing (spike counts) applied to the 300 Hz – 6 kHz bandpass filtered local field potentials in 0.1 sec time windows. MUA features explored in this study included the mean, variance, and Fano-factor, computed across the MEA channels. In addition, we used the leading eigenvalues of MUA spatial and temporal correlation matrices computed in 1-sec moving time windows. We assessed the seizure detection approach on out-of-sample data from one-participant recordings with six seizure events and 4.73-hour interictal data. The proposed MUA-based detection approach yielded a 100% sensitivity (6/6) and no false positives, and a latency of 4.17 ± 2.27 sec (mean ± SD) with respect to ECoG-identified seizure onsets. These preliminary results indicate intracortical MUA may be a useful signal for early detection of human epileptic seizures. PMID:25571313

  13. Near real-time vaccine safety surveillance with partially accrued data.

    PubMed

    Greene, Sharon K; Kulldorff, Martin; Yin, Ruihua; Yih, W Katherine; Lieu, Tracy A; Weintraub, Eric S; Lee, Grace M

    2011-06-01

    The Vaccine Safety Datalink (VSD) Project conducts near real-time vaccine safety surveillance using sequential analytic methods. Timely surveillance is critical in identifying potential safety problems and preventing additional exposure before most vaccines are administered. For vaccines that are administered during a short period, such as influenza vaccines, timeliness can be improved by undertaking analyses while risk windows following vaccination are ongoing and by accommodating predictable and unpredictable data accrual delays. We describe practical solutions to these challenges, which were adopted by the VSD Project during pandemic and seasonal influenza vaccine safety surveillance in 2009/2010. Adjustments were made to two sequential analytic approaches. The Poisson-based approach compared the number of pre-defined adverse events observed following vaccination with the number expected using historical data. The expected number was adjusted for the proportion of the risk window elapsed and the proportion of inpatient data estimated to have accrued. The binomial-based approach used a self-controlled design, comparing the observed numbers of events in risk versus comparison windows. Events were included in analysis only if they occurred during a week that had already passed for both windows. Analyzing data before risk windows fully elapsed improved the timeliness of safety surveillance. Adjustments for data accrual lags were tailored to each data source and avoided biasing analyses away from detecting a potential safety problem, particularly early during surveillance. The timeliness of vaccine and drug safety surveillance can be improved by properly accounting for partially elapsed windows and data accrual delays. Copyright © 2011 John Wiley & Sons, Ltd.

  14. Liquid chromatography, in combination with a quadrupole time-of-flight instrument (LC QTOF), with sequential window acquisition of all theoretical fragment-ion spectra (SWATH) acquisition: systematic studies on its use for screenings in clinical and forensic toxicology and comparison with information-dependent acquisition (IDA).

    PubMed

    Roemmelt, Andreas T; Steuer, Andrea E; Poetzsch, Michael; Kraemer, Thomas

    2014-12-02

    Forensic and clinical toxicological screening procedures are employing liquid chromatography-tandem mass spectrometry (LC-MS/MS) techniques with information-dependent acquisition (IDA) approaches more and more often. It is known that the complexity of a sample and the IDA settings might prevent important compounds from being triggered. Therefore, data-independent acquisition (DIA) methods should be more suitable for systematic toxicological analysis (STA). The DIA method sequential window acquisition of all theoretical fragment-ion spectra (SWATH), which uses Q1 windows of 20-35 Da for data-independent fragmentation, was systematically investigated for its suitability for STA. Quality of SWATH-generated mass spectra were evaluated with regard to mass error, relative abundance of the fragments, and library hits. With the Q1 window set to 20-25 Da, several precursors pass Q1 at the same time and are fragmented, thus impairing the library search algorithms to a different extent: forward fit was less affected than reverse fit and purity fit. Mass error was not affected. The relative abundance of the fragments was concentration dependent for some analytes and was influenced by cofragmentation, especially of deuterated analogues. Also, the detection rate of IDA compared to SWATH was investigated in a forced coelution experiment (up to 20 analytes coeluting). Even using several different IDA settings, it was observed that IDA failed to trigger relevant compounds. Screening results of 382 authentic forensic cases revealed that SWATH's detection rate was superior to IDA, which failed to trigger ∼10% of the analytes.

  15. Novel high-pressure windows made of glass-like carbon for x-ray analysis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Testemale, Denis; Prat, Alain; Lahera, Eric

    Original high-pressure glass-like carbon windows developed for x-ray spectroscopy applications are presented. The scientific and technological background of this new technical development is exposed, in particular the limitations of our existing beryllium windows in the context of x-ray absorption spectroscopy (XAS) measurements of solutions with very low solute concentrations at hydrothermal conditions (0.1-200 MPa, 30-600 °C). The benefits of glass-like carbon are exposed, notably its non-crystalline character, the absence of impurities which has been verified by micro-fluorescence laboratory measurements, and its non-toxicity which makes its machining safer. Finite elements mechanical calculations and experimental pressure tests were conducted to determine the pressuremore » limits of windows with two different geometries: cylindrical (thickness 0.5 mm) and inversed-dome shape (thickness 0.5 mm at the tip of the dome). The former break at 150 MPa and the latter show no sign of rupture at 400 MPa. Recent XAS measurements conducted with the new dome shaped windows are presented to show the advantages of the design that allow for the detection of very low concentrations in the transmission mode (down to 30 ppm) and the acquisition of fluorescence XAS spectra in diluted solutions at high pressure. Eventually the perspectives of this original development are discussed.« less

  16. Concussion-Mild Traumatic Brain Injury: Recoverable Injury with Potential for Serious Sequelae.

    PubMed

    Kamins, Joshua; Giza, Christopher C

    2016-10-01

    Concussion is increasingly recognized as a major public health issue. Most patients will return to baseline and experience full recovery, although a subset experiences persistent symptoms. Newer animal models and imaging studies are beginning to demonstrate that metabolic and neurovascular resolution may actually take longer than symptomatic recovery. Repeat traumatic brain injury within the metabolic window of dysfunction may result in worsened symptoms and prolonged recovery. The true risk for second impact syndrome appears to be small, and development of cerebral edema after a mild impact may be related to genetic risks rather than serial impacts. Published by Elsevier Inc.

  17. Laceration and Ejection Dangers of Automotive Glass, and the Weak Standards Involved. The Strain Fracture Test.

    PubMed Central

    Clark, Carl C.; Yudenfriend, Herbert; Redner, Alex S.

    2000-01-01

    Glazing types are historically described, with the laceration injuries and ejection deaths associated with present glazing. Sixty tempered glass windows manufactured at nominally four temper levels were tested for uncracked fracture fragment size and weight and length by the American and European standards, which fracture the glass without strain, and our preliminary strain fracture test, which produces longer uncracked fragments and heavier clusters of fragments. Our study relates the results by the three methods to the temper measurements using birefringence, with a discussion of alternate safer glazing and the inadequacy of present standards for reducing laceration and ejection dangers. PMID:11558078

  18. An Event-Triggered Machine Learning Approach for Accelerometer-Based Fall Detection.

    PubMed

    Putra, I Putu Edy Suardiyana; Brusey, James; Gaura, Elena; Vesilo, Rein

    2017-12-22

    The fixed-size non-overlapping sliding window (FNSW) and fixed-size overlapping sliding window (FOSW) approaches are the most commonly used data-segmentation techniques in machine learning-based fall detection using accelerometer sensors. However, these techniques do not segment by fall stages (pre-impact, impact, and post-impact) and thus useful information is lost, which may reduce the detection rate of the classifier. Aligning the segment with the fall stage is difficult, as the segment size varies. We propose an event-triggered machine learning (EvenT-ML) approach that aligns each fall stage so that the characteristic features of the fall stages are more easily recognized. To evaluate our approach, two publicly accessible datasets were used. Classification and regression tree (CART), k -nearest neighbor ( k -NN), logistic regression (LR), and the support vector machine (SVM) were used to train the classifiers. EvenT-ML gives classifier F-scores of 98% for a chest-worn sensor and 92% for a waist-worn sensor, and significantly reduces the computational cost compared with the FNSW- and FOSW-based approaches, with reductions of up to 8-fold and 78-fold, respectively. EvenT-ML achieves a significantly better F-score than existing fall detection approaches. These results indicate that aligning feature segments with fall stages significantly increases the detection rate and reduces the computational cost.

  19. Simultaneous detection of molecular oxygen and water vapor in the tissue optical window using tunable diode laser spectroscopy.

    PubMed

    Persson, Linda; Lewander, Märta; Andersson, Mats; Svanberg, Katarina; Svanberg, Sune

    2008-04-20

    We report on a dual-diode laser spectroscopic system for simultaneous detection of two gases. The technique is demonstrated by performing gas measurements on absorbing samples such as an air distance, and on absorbing and scattering porous samples such as human tissue. In the latter it is possible to derive the concentration of one gas by normalizing to a second gas of known concentration. This is possible if the scattering and absorption of the bulk material is equal or similar for the two wavelengths used, resulting in a common effective pathlength. Two pigtailed diode lasers are operated in a wavelength modulation scheme to detect molecular oxygen ~760 nm and water vapor ~935 nm within the tissue optical window (600 nm to 1.3 mum). Different modulation frequencies are used to distinguish between the two wavelengths. No crosstalk can be observed between the gas contents measured in the two gas channels. The system is made compact by using a computer board and performing software-based lock-in detection. The noise floor obtained corresponds to an absorption fraction of approximately 6x10(-5) for both oxygen and water vapor, yielding a minimum detection limit of ~2 mm for both gases in ambient air. The power of the technique is illustrated by the preliminary results of a clinical trial, nonintrusively investigating gas in human sinuses.

  20. Bacterial contamination monitor

    NASA Technical Reports Server (NTRS)

    Rich, E.; Macleod, N. H.

    1973-01-01

    Economical, simple, and fast method uses apparatus which detects bacteria by photography. Apparatus contains camera, film assembly, calibrated light bulb, opaque plastic plate with built-in reflecting surface and transparent window section, opaque slide, plate with chemical packages, and cover containing roller attached to handle.

  1. Prospects for Inflationary B-Mode Detection

    NASA Technical Reports Server (NTRS)

    Kogut, Alan J.

    2011-01-01

    Measurements of the linear polarization of the cosmic microwave background provide a direct window into the physics of inflation. The experimental challenges are daunting: not only is the predicted signal faint compared to the photon noise limit, but it is hidden behind competing foregrounds from both local and cosmic sources. I will discuss the experimental response to these challenges and the prospects for eventual detection and characterization of the inflationary signal.

  2. Centralized Monitoring of the Microsoft Windows-based computers of the LHC Experiment Control Systems

    NASA Astrophysics Data System (ADS)

    Varela Rodriguez, F.

    2011-12-01

    The control system of each of the four major Experiments at the CERN Large Hadron Collider (LHC) is distributed over up to 160 computers running either Linux or Microsoft Windows. A quick response to abnormal situations of the computer infrastructure is crucial to maximize the physics usage. For this reason, a tool was developed to supervise, identify errors and troubleshoot such a large system. Although the monitoring of the performance of the Linux computers and their processes was available since the first versions of the tool, it is only recently that the software package has been extended to provide similar functionality for the nodes running Microsoft Windows as this platform is the most commonly used in the LHC detector control systems. In this paper, the architecture and the functionality of the Windows Management Instrumentation (WMI) client developed to provide centralized monitoring of the nodes running different flavour of the Microsoft platform, as well as the interface to the SCADA software of the control systems are presented. The tool is currently being commissioned by the Experiments and it has already proven to be very efficient optimize the running systems and to detect misbehaving processes or nodes.

  3. Radiation, Thermal Gradient and Weight: a threefold dilemma for PLATO

    NASA Astrophysics Data System (ADS)

    Magrin, Demetrio; Ragazzoni, Roberto; Bruno, Giordano; Piazza, Daniele; Borsa, Francesco; Ghigo, Mauro; Mogulsky, Valery; Bergomi, Maria; Biondi, Federico; Chinellato, Simonetta; Dima, Marco; Farinato, Jacopo; Greggio, Davide; Gullieuszik, Marco; Marafatto, Luca; Viotto, Valentina; Munari, Matteo; Pagano, Isabella; Sicilia, Daniela; Basso, Stefano; Spiga, Daniele; Bandy, Timothy; Brändli, Mathias; Benz, Willy; De Roche, Thierry; Rieder, Martin; Brandeker, Alexis; Klebor, Maximilian; Schweitzer, Mario; Wieser, Matthias; Erikson, Anders; Rauer, Heike

    2016-07-01

    The project PLAnetary Transits and Oscillations of stars (PLATO) is one of the selected medium class (M class) missions in the framework of the ESA Cosmic Vision 2015-2025 program. The mean scientific goal of PLATO is the discovery and study of extrasolar planetary systems by means of planetary transits detection. The opto mechanical subsystem of the payload is made of 32 normal telescope optical units (N-TOUs) and 2 fast telescope optical units (FTOUs). The optical configuration of each TOU is an all refractive design based on six properly optimized lenses. In the current baseline, in front of each TOU a Suprasil window is foreseen. The main purposes of the entrance window are to shield the following lenses from possible damaging high energy radiation and to mitigate the thermal gradient that the first optical element will experience during the launch from ground to space environment. In contrast, the presence of the window increases the overall mass by a non-negligible quantity. We describe here the radiation and thermal analysis and their impact on the quality and risks assessment, summarizing the trade-off process with pro and cons on having or dropping the entrance window in the optical train.

  4. Shilling attack detection for recommender systems based on credibility of group users and rating time series.

    PubMed

    Zhou, Wei; Wen, Junhao; Qu, Qiang; Zeng, Jun; Cheng, Tian

    2018-01-01

    Recommender systems are vulnerable to shilling attacks. Forged user-generated content data, such as user ratings and reviews, are used by attackers to manipulate recommendation rankings. Shilling attack detection in recommender systems is of great significance to maintain the fairness and sustainability of recommender systems. The current studies have problems in terms of the poor universality of algorithms, difficulty in selection of user profile attributes, and lack of an optimization mechanism. In this paper, a shilling behaviour detection structure based on abnormal group user findings and rating time series analysis is proposed. This paper adds to the current understanding in the field by studying the credibility evaluation model in-depth based on the rating prediction model to derive proximity-based predictions. A method for detecting suspicious ratings based on suspicious time windows and target item analysis is proposed. Suspicious rating time segments are determined by constructing a time series, and data streams of the rating items are examined and suspicious rating segments are checked. To analyse features of shilling attacks by a group user's credibility, an abnormal group user discovery method based on time series and time window is proposed. Standard testing datasets are used to verify the effect of the proposed method.

  5. Low-Rank Matrix Recovery Approach for Clutter Rejection in Real-Time IR-UWB Radar-Based Moving Target Detection

    PubMed Central

    Sabushimike, Donatien; Na, Seung You; Kim, Jin Young; Bui, Ngoc Nam; Seo, Kyung Sik; Kim, Gil Gyeom

    2016-01-01

    The detection of a moving target using an IR-UWB Radar involves the core task of separating the waves reflected by the static background and by the moving target. This paper investigates the capacity of the low-rank and sparse matrix decomposition approach to separate the background and the foreground in the trend of UWB Radar-based moving target detection. Robust PCA models are criticized for being batched-data-oriented, which makes them inconvenient in realistic environments where frames need to be processed as they are recorded in real time. In this paper, a novel method based on overlapping-windows processing is proposed to cope with online processing. The method consists of processing a small batch of frames which will be continually updated without changing its size as new frames are captured. We prove that RPCA (via its Inexact Augmented Lagrange Multiplier (IALM) model) can successfully separate the two subspaces, which enhances the accuracy of target detection. The overlapping-windows processing method converges on the optimal solution with its batch counterpart (i.e., processing batched data with RPCA), and both methods prove the robustness and efficiency of the RPCA over the classic PCA and the commonly used exponential averaging method. PMID:27598159

  6. Shilling attack detection for recommender systems based on credibility of group users and rating time series

    PubMed Central

    Wen, Junhao; Qu, Qiang; Zeng, Jun; Cheng, Tian

    2018-01-01

    Recommender systems are vulnerable to shilling attacks. Forged user-generated content data, such as user ratings and reviews, are used by attackers to manipulate recommendation rankings. Shilling attack detection in recommender systems is of great significance to maintain the fairness and sustainability of recommender systems. The current studies have problems in terms of the poor universality of algorithms, difficulty in selection of user profile attributes, and lack of an optimization mechanism. In this paper, a shilling behaviour detection structure based on abnormal group user findings and rating time series analysis is proposed. This paper adds to the current understanding in the field by studying the credibility evaluation model in-depth based on the rating prediction model to derive proximity-based predictions. A method for detecting suspicious ratings based on suspicious time windows and target item analysis is proposed. Suspicious rating time segments are determined by constructing a time series, and data streams of the rating items are examined and suspicious rating segments are checked. To analyse features of shilling attacks by a group user’s credibility, an abnormal group user discovery method based on time series and time window is proposed. Standard testing datasets are used to verify the effect of the proposed method. PMID:29742134

  7. An Extension to the Kalman Filter for an Improved Detection of Unknown Behavior

    NASA Technical Reports Server (NTRS)

    Benazera, Emmanuel; Narasimhan, Sriram

    2005-01-01

    The use of Kalman filter (KF) interferes with fault detection algorithms based on the residual between estimated and measured variables, since the measured values are used to update the estimates. This feedback results in the estimates being pulled closer to the measured values, influencing the residuals in the process. Here we present a fault detection scheme for systems that are being tracked by a KF. Our approach combines an open-loop prediction over an adaptive window and an information-based measure of the deviation of the Kalman estimate from the prediction to improve fault detection.

  8. Myocardial perfusion magnetic resonance imaging using sliding-window conjugate-gradient HYPR methods in canine with stenotic coronary arteries.

    PubMed

    Ge, Lan; Kino, Aya; Lee, Daniel; Dharmakumar, Rohan; Carr, James C; Li, Debiao

    2010-01-01

    First-pass perfusion magnetic resonance imaging (MRI) is a promising technique for detecting ischemic heart disease. However, the diagnostic value of the method is limited by the low spatial coverage, resolution, signal-to-noise ratio (SNR), and cardiac motion-related image artifacts. A combination of sliding window and conjugate-gradient HighlY constrained back-PRojection reconstruction (SW-CG-HYPR) method has been proposed in healthy volunteer studies to reduce the acquisition window for each slice while maintaining the temporal resolution of 1 frame per heartbeat in myocardial perfusion MRI. This method allows for improved spatial coverage, resolution, and SNR. In this study, we use a controlled animal model to test whether the myocardial territory supplied by a stenotic coronary artery can be detected accurately by SW-CG-HYPR perfusion method under pharmacological stress. Results from 6 mongrel dogs (15-25 kg) studies demonstrate the feasibility of SW-CG-HYPR to detect regional perfusion defects. Using this method, the acquisition time per cardiac cycle was reduced by a factor of 4, and the spatial coverage was increased from 2 to 3 slices to 6 slices as compared with the conventional techniques including both turbo-Fast Low Angle Short (FLASH) and echoplanar imaging (EPI). The SNR of the healthy myocardium at peak enhancement with SW-CG-HYPR (12.68 ± 2.46) is significantly higher (P < 0.01) than the turbo-FLASH (8.65 ± 1.93) and EPI (5.48 ± 1.24). The spatial resolution of SW-CG-HYPR images is 1.2 × 1.2 × 8.0 mm, which is better than the turbo-FLASH (1.8 × 1.8 × 8.0 mm) and EPI (2.0 × 1.8 × 8.0 mm). Sliding-window CG-HYPR is a promising technique for myocardial perfusion MRI. This technique provides higher image quality with respect to significantly improved SNR and spatial resolution of the myocardial perfusion images, which might improve myocardial perfusion imaging in a clinical setting.

  9. Wildfire cluster detection using space-time scan statistics

    NASA Astrophysics Data System (ADS)

    Tonini, M.; Tuia, D.; Ratle, F.; Kanevski, M.

    2009-04-01

    The aim of the present study is to identify spatio-temporal clusters of fires sequences using space-time scan statistics. These statistical methods are specifically designed to detect clusters and assess their significance. Basically, scan statistics work by comparing a set of events occurring inside a scanning window (or a space-time cylinder for spatio-temporal data) with those that lie outside. Windows of increasing size scan the zone across space and time: the likelihood ratio is calculated for each window (comparing the ratio "observed cases over expected" inside and outside): the window with the maximum value is assumed to be the most probable cluster, and so on. Under the null hypothesis of spatial and temporal randomness, these events are distributed according to a known discrete-state random process (Poisson or Bernoulli), which parameters can be estimated. Given this assumption, it is possible to test whether or not the null hypothesis holds in a specific area. In order to deal with fires data, the space-time permutation scan statistic has been applied since it does not require the explicit specification of the population-at risk in each cylinder. The case study is represented by Florida daily fire detection using the Moderate Resolution Imaging Spectroradiometer (MODIS) active fire product during the period 2003-2006. As result, statistically significant clusters have been identified. Performing the analyses over the entire frame period, three out of the five most likely clusters have been identified in the forest areas, on the North of the country; the other two clusters cover a large zone in the South, corresponding to agricultural land and the prairies in the Everglades. Furthermore, the analyses have been performed separately for the four years to analyze if the wildfires recur each year during the same period. It emerges that clusters of forest fires are more frequent in hot seasons (spring and summer), while in the South areas they are widely present along the whole year. The analysis of fires distribution to evaluate if they are statistically more frequent in some area or/and in some period of the year, can be useful to support fire management and to focus on prevention measures.

  10. Applicability of optical scanner method for fine root dynamics

    NASA Astrophysics Data System (ADS)

    Kume, Tomonori; Ohashi, Mizue; Makita, Naoki; Khoon Kho, Lip; Katayama, Ayumi; Matsumoto, Kazuho; Ikeno, Hidetoshi

    2016-04-01

    Fine root dynamics is one of the important components in forest carbon cycling, as ~60 % of tree photosynthetic production can be allocated to root growth and metabolic activities. Various techniques have been developed for monitoring fine root biomass, production, mortality in order to understand carbon pools and fluxes resulting from fine roots dynamics. The minirhizotron method is now a widely used technique, in which a transparent tube is inserted into the soil and researchers count an increase and decrease of roots along the tube using images taken by a minirhizotron camera or minirhizotron video camera inside the tube. This method allows us to observe root behavior directly without destruction, but has several weaknesses; e.g., the difficulty of scaling up the results to stand level because of the small observation windows. Also, most of the image analysis are performed manually, which may yield insufficient quantitative and objective data. Recently, scanner method has been proposed, which can produce much bigger-size images (A4-size) with lower cost than those of the minirhizotron methods. However, laborious and time-consuming image analysis still limits the applicability of this method. In this study, therefore, we aimed to develop a new protocol for scanner image analysis to extract root behavior in soil. We evaluated applicability of this method in two ways; 1) the impact of different observers including root-study professionals, semi- and non-professionals on the detected results of root dynamics such as abundance, growth, and decomposition, and 2) the impact of window size on the results using a random sampling basis exercise. We applied our new protocol to analyze temporal changes of root behavior from sequential scanner images derived from a Bornean tropical forests. The results detected by the six observers showed considerable concordance in temporal changes in the abundance and the growth of fine roots but less in the decomposition. We also examined potential errors due to window size in the temporal changes in abundance and growth using the detected results, suggesting high applicability of the scanner methods with wide observation windows.

  11. Novel Drift Structures for Silicon and Compound Semiconductor X-Ray and Gamma-Ray Detectors

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bradley E. Patt; Jan S. Iwanczyk

    Recently developed silicon- and compound-semiconductor-based drift detector structures have produced excellent performance for charged particles, X rays, and gamma rays and for low-signal visible light detection. The silicon drift detector (SDD) structures that we discuss relate to direct X-ray detectors and scintillation photon detectors coupled with scintillators for gamma rays. Recent designs include several novel features that ensure very low dark current (both bulk silicon dark current and surface dark current) and hence low noise. In addition, application of thin window technology ensures a very high quantum efficiency entrance window on the drift photodetector.

  12. The development of a portable ultrahigh vacuum chamber via silicon block.

    PubMed

    Chuang, Ho-Chiao; Huang, Chia-Shiuan

    2014-05-01

    This paper describes a nonmetallic, light weight portable chamber for ultra-high vacuum (UHV) applications. The chamber consists of a processed silicon block anodically bonding five polished Pyrex glass windows and a Pyrex glass adapter, without using any screws, bolts or vacuum adhesives. The design features provide an alternative chamber for UHV applications which require nonmetallic components. We have cyclically baked the chamber up to 180 °C for 160 h and have achieved an ultimate pressure of 1.4 × 10(-9) Torr (limited by our pumping station), with no leak detected. Both Pyrex glass windows and Pyrex glass adapter have been used successfully.

  13. Micro-machined thermo-conductivity detector

    DOEpatents

    Yu, Conrad

    2003-01-01

    A micro-machined thermal conductivity detector for a portable gas chromatograph. The detector is highly sensitive and has fast response time to enable detection of the small size gas samples in a portable gas chromatograph which are in the order of nanoliters. The high sensitivity and fast response time are achieved through micro-machined devices composed of a nickel wire, for example, on a silicon nitride window formed in a silicon member and about a millimeter square in size. In addition to operating as a thermal conductivity detector, the silicon nitride window with a micro-machined wire therein of the device can be utilized for a fast response heater for PCR applications.

  14. Novel Indocyanine Green-Phytate Colloid Technique for Sentinel Node Detection in Head and Neck: Mouse Study.

    PubMed

    Araki, Koji; Mizokami, Daisuke; Tomifuji, Masayuki; Yamashita, Taku; Ohnuki, Kazunobu; Umeda, Izumi O; Fujii, Hirofumi; Kosuda, Shigeru; Shiotani, Akihiro

    2014-08-01

    Sentinel node navigation surgery using real-time, near-infrared imaging with indocyanine green is becoming popular by allowing head and neck surgeons to avoid unnecessary neck dissection. The major drawback of this method is its quick migration through the lymphatics, limiting the diagnostic time window and undesirable detection of downstream nodes. We resolved this problem by mixing indocyanine green (ICG) with phytate colloid to retard its migration and demonstrated its feasibility in a nude mouse study. Experimental prospective animal study. Animal laboratory. Indocyanine green at 3 concentrations was tested to determine the optimal concentration for sentinel lymph node detection in a mouse model. Effect of indocyanine green with phytate colloid mixture solutions was also analyzed. Indocyanine green or mixture solution at different mixing ratios were injected into the tongue of nude mice and near-infrared fluorescence images were captured sequentially for up to 48 hours. The brightness of fluorescence in the sentinel lymph node and lymph nodes further downstream were assessed. Indocyanine green concentration >50 μg/mL did not improve sentinel lymph node detection. The addition of phytate colloid to indocyanine green extended the period when sentinel lymph node was detectable. Second echelon lymph nodes were not imaged in mice injected with the mixture, while these were visualized in mice injected with indocyanine green alone. This novel technique of ICG-phytate colloid mixture allows prolonged diagnostic time window, prevention of downstream subsequent nodes detection, and improved accuracy for the detection of true sentinel lymph nodes. © American Academy of Otolaryngology—Head and Neck Surgery Foundation 2014.

  15. Time and timing in the acoustic recognition system of crickets

    PubMed Central

    Hennig, R. Matthias; Heller, Klaus-Gerhard; Clemens, Jan

    2014-01-01

    The songs of many insects exhibit precise timing as the result of repetitive and stereotyped subunits on several time scales. As these signals encode the identity of a species, time and timing are important for the recognition system that analyzes these signals. Crickets are a prominent example as their songs are built from sound pulses that are broadcast in a long trill or as a chirped song. This pattern appears to be analyzed on two timescales, short and long. Recent evidence suggests that song recognition in crickets relies on two computations with respect to time; a short linear-nonlinear (LN) model that operates as a filter for pulse rate and a longer integration time window for monitoring song energy over time. Therefore, there is a twofold role for timing. A filter for pulse rate shows differentiating properties for which the specific timing of excitation and inhibition is important. For an integrator, however, the duration of the time window is more important than the precise timing of events. Here, we first review evidence for the role of LN-models and integration time windows for song recognition in crickets. We then parameterize the filter part by Gabor functions and explore the effects of duration, frequency, phase, and offset as these will correspond to differently timed patterns of excitation and inhibition. These filter properties were compared with known preference functions of crickets and katydids. In a comparative approach, the power for song discrimination by LN-models was tested with the songs of over 100 cricket species. It is demonstrated how the acoustic signals of crickets occupy a simple 2-dimensional space for song recognition that arises from timing, described by a Gabor function, and time, the integration window. Finally, we discuss the evolution of recognition systems in insects based on simple sensory computations. PMID:25161622

  16. Differential-optoacoustic absorption detector

    NASA Technical Reports Server (NTRS)

    Shumate, M. S.

    1977-01-01

    Two-cell spectrophone detects trace amounts of atmospheric pollutants by measuring absorption coefficients of gases with various laser sources. Device measures pressure difference between two tapered cells with differential manometer. Background signal is reduced by balanced window heating and balanced carrier gas absorption in two cells.

  17. Detecting, anticipating, and predicting critical transitions in spatially extended systems.

    PubMed

    Kwasniok, Frank

    2018-03-01

    A data-driven linear framework for detecting, anticipating, and predicting incipient bifurcations in spatially extended systems based on principal oscillation pattern (POP) analysis is discussed. The dynamics are assumed to be governed by a system of linear stochastic differential equations which is estimated from the data. The principal modes of the system together with corresponding decay or growth rates and oscillation frequencies are extracted as the eigenvectors and eigenvalues of the system matrix. The method can be applied to stationary datasets to identify the least stable modes and assess the proximity to instability; it can also be applied to nonstationary datasets using a sliding window approach to track the changing eigenvalues and eigenvectors of the system. As a further step, a genuinely nonstationary POP analysis is introduced. Here, the system matrix of the linear stochastic model is time-dependent, allowing for extrapolation and prediction of instabilities beyond the learning data window. The methods are demonstrated and explored using the one-dimensional Swift-Hohenberg equation as an example, focusing on the dynamics of stochastic fluctuations around the homogeneous stable state prior to the first bifurcation. The POP-based techniques are able to extract and track the least stable eigenvalues and eigenvectors of the system; the nonstationary POP analysis successfully predicts the timing of the first instability and the unstable mode well beyond the learning data window.

  18. Organophosphate flame retardants and plasticizers in indoor dust, air and window wipes in newly built low-energy preschools.

    PubMed

    Persson, Josefin; Wang, Thanh; Hagberg, Jessika

    2018-07-01

    The construction of extremely airtight and energy efficient low-energy buildings is achieved by using functional building materials, such as age-resistant plastics, insulation, adhesives, and sealants. Additives such as organophosphate flame retardants (OPFRs) can be added to some of these building materials as flame retardants and plasticizers. Some OPFRs are considered persistent, bioaccumulative and toxic. Therefore, in this pilot study, the occurrence and distribution of nine OPFRs were determined for dust, air, and window wipe samples collected in newly built low-energy preschools with and without environmental certifications. Tris(1,3-dichloroisopropyl) phosphate (TDCIPP) and triphenyl phosphate (TPHP) were detected in all indoor dust samples at concentrations ranging from 0.014 to 10μg/g and 0.0069 to 79μg/g, respectively. Only six OPFRs (predominantly chlorinated OPFRs) were detected in the indoor air. All nine OPFRs were found on the window surfaces and the highest concentrations, which occurred in the reference preschool, were measured for 2-ethylhexyl diphenyl phosphate (EHDPP) (maximum concentration: 1500ng/m 2 ). Interestingly, the OPFR levels in the environmental certified low-energy preschools were lower than those in the reference preschool and the non-certified low-energy preschool, probably attributed to the usage of environmental friendly and low-emitting building materials, interior decorations, and consumer products. Copyright © 2018 Elsevier B.V. All rights reserved.

  19. Detecting, anticipating, and predicting critical transitions in spatially extended systems

    NASA Astrophysics Data System (ADS)

    Kwasniok, Frank

    2018-03-01

    A data-driven linear framework for detecting, anticipating, and predicting incipient bifurcations in spatially extended systems based on principal oscillation pattern (POP) analysis is discussed. The dynamics are assumed to be governed by a system of linear stochastic differential equations which is estimated from the data. The principal modes of the system together with corresponding decay or growth rates and oscillation frequencies are extracted as the eigenvectors and eigenvalues of the system matrix. The method can be applied to stationary datasets to identify the least stable modes and assess the proximity to instability; it can also be applied to nonstationary datasets using a sliding window approach to track the changing eigenvalues and eigenvectors of the system. As a further step, a genuinely nonstationary POP analysis is introduced. Here, the system matrix of the linear stochastic model is time-dependent, allowing for extrapolation and prediction of instabilities beyond the learning data window. The methods are demonstrated and explored using the one-dimensional Swift-Hohenberg equation as an example, focusing on the dynamics of stochastic fluctuations around the homogeneous stable state prior to the first bifurcation. The POP-based techniques are able to extract and track the least stable eigenvalues and eigenvectors of the system; the nonstationary POP analysis successfully predicts the timing of the first instability and the unstable mode well beyond the learning data window.

  20. An ultrasensitive alloyed near-infrared quinternary quantum dot-molecular beacon nanodiagnostic bioprobe for influenza virus RNA.

    PubMed

    Adegoke, Oluwasesan; Kato, Tatsuya; Park, Enoch Y

    2016-06-15

    Conventional techniques used to diagnose influenza virus face several challenges, such as low sensitivity, slow detection, false positive results and misinterpreted data. Hence, diagnostic probes that can offer robust detection qualities, such as high sensitivity, rapid detection, elimination of false positive data, and specificity for influenza virus, are urgently needed. The near-infrared (NIR) range is an attractive spectral window due to low photon absorption by biological tissues, hence well-constructed fluorescent biosensors that emit within the NIR window can offer an improved limit of detection (LOD). Here, we demonstrate the use of a newly synthesized NIR quinternary alloyed CdZnSeTeS quantum dots (QDs) as an ultrasensitive fluorescence reporter in a conjugated molecular beacon (MB) assay to detect extremely low concentrations of influenza virus H1N1 RNA. Under optimum conditions, two different strains of influenza virus H1N1 RNA were detected based on fluorescence enhancement signal transduction. We successfully discriminated between two different strains of influenza virus H1N1 RNA based on the number of complementary nucleotide base pairs of the MB to the target RNA sequence. The merits of our bioprobe system are rapid detection, high sensitivity (detects H1N1 viral RNA down to 2 copies/mL), specificity and versatility (detects H1N1 viral RNA in human serum). For comparison, a conventional CdSe/ZnS-MB probe could not detect the extremely low concentrations of H1N1 viral RNA detected by our NIR alloyed CdZnSeTeS-MB probe. Our bioprobe detection system produced a LOD as low as ~1 copy/mL and is more sensitive than conventional molecular tests and rapid influenza detection tests (RIDTS) probes. Copyright © 2016 Elsevier B.V. All rights reserved.

  1. STS-114 Micrometeoroid/Orbital Debris (MMOD) Post-Flight Assessment

    NASA Technical Reports Server (NTRS)

    Hyde, J.; Bernhard, R.; Christiansen, E.

    2007-01-01

    NASA Johnson Space Center (JSC) personnel assisted Kennedy Space Center (KSC) inspection teams in the identification of 41 micrometeoroid/orbital debris (MMOD) impact sites on the OV-103 vehicle (Discovery) during STS-114 postflight inspections. There were 14 MMOD impacts reported on the crew module windows (Figure 1). The largest impact feature, a 6.6 mm x 5.8 mm crater on window #4, was caused by a particle with an estimated diameter of 0.22 mm (Figure 2). This impact was among the largest ever recorded on a crew module window. The window was removed and replaced. Scanning Electron Microscope/Energy Dispersive X-ray (SEM/EDX) analysis of dental mold samples from the impact site to determine particle origin was inconclusive, possibly due to contamination picked up on the ferry flight from Edwards Air Force Base to KSC. The radiators on the inside of the payload bay doors sustained 19 impacts (Figure 3) with one of the impacts causing a face sheet perforation. The 0.61 mm diameter hole was produced by a particle with an estimated diameter of 0.4 mm, which approaches the 0.5-mm critical particle diameter of the wing leading edge reinforced carbon-carbon (RCC) panel high-temperature regions (Zone 3, Figure 4) that was established during Return to Flight testing of the RCC panels. An inspection of the payload bay door exterior insulation (FRSI) revealed a 5.8 mm x 4.5 mm defect that was caused by an MMOD particle with unknown composition, as the sample obtained was contaminated. Figure 5 provides a summary of the exterior surface survey that was conducted following the STS-114 mission. Two windows were removed and replaced due to hypervelocity impact. Nineteen impacts were recorded on the payload bay door radiators, with one face sheet penetration. Three impact sites were identified on the FRSI. There were four hypervelocity impact sites detected on the wing leading edge RCC panels. One impact was detected on the top cover of the TPS sample box (TSB) payload that was mounted on a carrier in the aft portion of the payload bay.

  2. Automatic Fringe Detection for Oil Film Interferometry Measurement of Skin Friction

    NASA Technical Reports Server (NTRS)

    Naughton, Jonathan W.; Decker, Robert K.; Jafari, Farhad

    2001-01-01

    This report summarizes two years of work on investigating algorithms for automatically detecting fringe patterns in images acquired using oil-drop interferometry for the determination of skin friction. Several different analysis methods were tested, and a combination of a windowed Fourier transform followed by a correlation was found to be most effective. The implementation of this method is discussed and details of the process are described. The results indicate that this method shows promise for automating the fringe detection process, but further testing is required.

  3. A Novel, Open Access Method to Assess Sleep Duration Using a Wrist-Worn Accelerometer

    PubMed Central

    Anderson, Kirstie N.; Denton, Sarah J.; Oliver, James; Catt, Michael; Abell, Jessica G.; Kivimäki, Mika; Trenell, Michael I.; Singh-Manoux, Archana

    2015-01-01

    Wrist-worn accelerometers are increasingly being used for the assessment of physical activity in population studies, but little is known about their value for sleep assessment. We developed a novel method of assessing sleep duration using data from 4,094 Whitehall II Study (United Kingdom, 2012–2013) participants aged 60–83 who wore the accelerometer for 9 consecutive days, filled in a sleep log and reported sleep duration via questionnaire. Our sleep detection algorithm defined (nocturnal) sleep as a period of sustained inactivity, itself detected as the absence of change in arm angle greater than 5 degrees for 5 minutes or more, during a period recorded as sleep by the participant in their sleep log. The resulting estimate of sleep duration had a moderate (but similar to previous findings) agreement with questionnaire based measures for time in bed, defined as the difference between sleep onset and waking time (kappa = 0.32, 95%CI:0.29,0.34) and total sleep duration (kappa = 0.39, 0.36,0.42). This estimate was lower for time in bed for women, depressed participants, those reporting more insomnia symptoms, and on weekend days. No such group differences were found for total sleep duration. Our algorithm was validated against data from a polysomnography study on 28 persons which found a longer time window and lower angle threshold to have better sensitivity to wakefulness, while the reverse was true for sensitivity to sleep. The novelty of our method is the use of a generic algorithm that will allow comparison between studies rather than a “count” based, device specific method. PMID:26569414

  4. LC/ESI-MS/MS method for quantification of 28 synthetic cannabinoids in neat oral fluid and its application to preliminary studies on their detection windows.

    PubMed

    Kneisel, Stefan; Speck, Michael; Moosmann, Bjoern; Corneillie, Todd M; Butlin, Nathaniel G; Auwärter, Volker

    2013-05-01

    Serum and urine samples are commonly used for the analysis of synthetic cannabinoids in biofluids; however, their utilization as analytical matrices for drug abstinence control features some substantial drawbacks. While for blood collection invasive sampling is inevitable, the urinary analysis of synthetic cannabinoids is limited by the lack of available reference standards of the respective major metabolites. Moreover, the long detectability of synthetic cannabinoids in both matrices hampers the identification of a recent synthetic cannabinoid use. This article describes the development, validation and application of an LC/ESI-MS/MS method for the quantification of 28 synthetic cannabinoids in neat oral fluid (OF) samples. OF samples were prepared by protein precipitation using ice-cold acetonitrile. Chromatographic separation was achieved by gradient elution on a Luna Phenyl Hexyl column (50 × 2 mm, 5 μm), while detection was carried out on a QTrap 4000 instrument in positive ionization mode. The limits of detection ranged from 0.02 to 0.40 ng/mL, whereas the lower limits of quantification ranged from 0.2 to 4.0 ng/mL. The method was applied to authentic samples collected during two preliminary studies in order to obtain insights into the general detectability and detection windows of synthetic cannabinoids in this matrix. The results indicate that synthetic cannabinoids are transferred from the blood stream into OF and vice versa only at a very low rate. Therefore, positive OF samples are due to contamination of the oral cavity during smoking. As these drug-contaminations could be detected up to approximately 2 days, neat oral fluid appears to be well suited for detection of a recent synthetic cannabinoid use.

  5. Comparison of Zika virus (ZIKV) RNA detection in plasma, whole blood and urine - Case series of travel-associated ZIKV infection imported to Italy, 2016.

    PubMed

    Rossini, Giada; Gaibani, Paolo; Vocale, Caterina; Cagarelli, Roberto; Landini, Maria Paola

    2017-09-01

    The capability to detect ZIKV RNA is of crucial importance for cases confirmation. However, due to the short-lived viremia, the detection of ZIKV RNA in plasma/serum is challenging for samples collected more than one week after onset of clinical illness. We compared the window time and detection rate of ZIKV RNA in different specimen types (plasma, whole blood and urine) collected simultaneously at several times post-symptom onset. We examined the presence of ZIKV RNA in matched specimens of whole blood, plasma and urine collected in the same date (3-28 days after symptom onset) from 10 ZIKV infected patients. ZIKV RNA was found in plasma as late as 10 days after symptoms onset and tested positive in all 5 (100%) and in 2 of 6 (33,3%) plasma samples collected 1-5 and 6-10 days after symptoms onset, respectively. ZIKV RNA was positive in urine through the 21st day after symptom onset; the detection rate of ZIKV RNA in urine samples was 100% (11/11) for samples collected 1-10 days from symptoms onset, decreasing at later times of sampling. The detection rate of ZIKV RNA in whole blood was comparable to that in urine samples but extended the window of detection of ZIKV RNA up to 26 days after symptom onset. Our results highlight the usefulness of simultaneously testing multiple specimen types in order to extend the rate and the time frame of ZIKV RNA detection, increasing the possibility of cases confirmation through direct diagnosis in convalescence-phase of infection, supplementing serological data which are often difficult to interpret. Copyright © 2017 The British Infection Association. Published by Elsevier Ltd. All rights reserved.

  6. Influence of backside loading on the floating mass transducer: An in vitro experimental study.

    PubMed

    Gostian, A-O; Otte, M S; Pazen, D; Ortmann, M; Schwarz, D; Hüttenbrink, K B; Beutner, D

    2018-04-01

    The vibration of the floating mass transducer (FMT) of a single active middle-ear implant (AMEI) is distinctly influenced by the properties of the material coupled to its back side. In round window vibroplasty, the FMT needs to be padded against the surrounding bone opposite from the round window membrane. This represents one factor influencing its performance as a round window driver. Therefore, we examined the effects of different materials linked to the back side of an FMT on its vibration range. The back side of an FMT was glued to a silicone cylinder 1.0 mm in diameter and 1.0 mm - 1.5 mm in length and of 40A, 50A or 70A Shore hardness; to cartilage of equivalent size; or to a round window soft coupler (RWSC), all firmly fixed on a steel plate. The vibrations were determined by a laser Doppler vibrometer (LDV) measuring the velocity of the centre point on the front side of the FMT. The materials on the back side of the FMT significantly influenced the vibration range of the FMT. The RWSC and silicone of 40A Shore hardness allowed for the highest detected velocities, while cartilage led to a distinct reduction similarly to 70A silicone. The coupling on the back side of an FMT distinctly affects its vibration range. In this regard, the RWSC and silicone of 40A Shore hardness yield the least impairment of vibration. Thus, the RWSC may be a feasible option in round window vibroplasty when additionally connected to the FMT opposite from the round window membrane. © 2017 John Wiley & Sons Ltd.

  7. Thermal regulation for APDs in a 1 mm(3) resolution clinical PET camera: design, simulation and experimental verification.

    PubMed

    Zhai, Jinjian; Vandenbroucke, Arne; Levin, Craig S

    2014-07-21

    We are developing a 1 mm(3) resolution positron emission tomography camera dedicated to breast imaging. The camera collects high energy photons emitted from radioactively labeled agents introduced in the patients in order to detect molecular signatures of breast cancer. The camera comprises many layers of lutetium yttrium oxyorthosilicate (LYSO) scintillation crystals coupled to position sensitive avalanche photodiodes (PSAPDs). The main objectives of the studies presented in this paper are to investigate the temperature profile of the layers of LYSO-PSAPD detectors (a.k.a. 'fins') residing in the camera and to use these results to present the design of the thermal regulation system for the front end of the camera. The study was performed using both experimental methods and simulation. We investigated a design with a heat-dissipating fin. Three fin configurations are tested: fin with Al windows (FwW), fin without Al windows (FwoW) and fin with alumina windows (FwAW). A Fluent® simulation was conducted to study the experimentally inaccessible temperature of the PSAPDs. For the best configuration (FwW), the temperature difference from the center to a point near the edge is 1.0 K when 1.5 A current was applied to the Peltier elements. Those of FwoW and FwAW are 2.6 K and 1.7 K, respectively. We conclude that the design of a heat-dissipating fin configuration with 'aluminum windows' (FwW) that borders the scintillation crystal arrays of 16 adjacent detector modules has better heat dissipation capabilities than the design without 'aluminum windows' (FwoW) and the design with 'alumina windows' (FwAW), respectively.

  8. Independent Orbiter Assessment (IOA): Analysis of the purge, vent and drain subsystem

    NASA Technical Reports Server (NTRS)

    Bynum, M. C., III

    1987-01-01

    The results of the Independent Orbiter Assessment (IOA) of the Failure Modes and Effects Analysis (FMEA) and Critical Items List (CIL) are presented. The IOA approach features a top-down analysis of the hardware to determine failure modes, criticality, and potential critical items. To preserve independence, this analysis was accomplished without reliance upon the results contained within the NASA FMEA/CIL documentation. This report documents the independent analysis results corresponding to the Orbiter PV and D (Purge, Vent and Drain) Subsystem hardware. The PV and D Subsystem controls the environment of unpressurized compartments and window cavities, senses hazardous gases, and purges Orbiter/ET Disconnect. The subsystem is divided into six systems: Purge System (controls the environment of unpressurized structural compartments); Vent System (controls the pressure of unpressurized compartments); Drain System (removes water from unpressurized compartments); Hazardous Gas Detection System (HGDS) (monitors hazardous gas concentrations); Window Cavity Conditioning System (WCCS) (maintains clear windows and provides pressure control of the window cavities); and External Tank/Orbiter Disconnect Purge System (prevents cryo-pumping/icing of disconnect hardware). Each level of hardware was evaluated and analyzed for possible failure modes and effects. Criticality was assigned based upon the severity of the effect for each failure mode. Four of the sixty-two failure modes analyzed were determined as single failures which could result in the loss of crew or vehicle. A possible loss of mission could result if any of twelve single failures occurred. Two of the criticality 1/1 failures are in the Window Cavity Conditioning System (WCCS) outer window cavity, where leakage and/or restricted flow will cause failure to depressurize/repressurize the window cavity. Two criticality 1/1 failures represent leakage and/or restricted flow in the Orbiter/ET disconnect purge network which prevent cryopumping/icing of disconnect hardware. Each level of hardware was evaluated and analyzed for possible failure modes and effects. Criticality was assigned based upon the severity of the effect for each failure mode.

  9. An efficient pseudomedian filter for tiling microrrays.

    PubMed

    Royce, Thomas E; Carriero, Nicholas J; Gerstein, Mark B

    2007-06-07

    Tiling microarrays are becoming an essential technology in the functional genomics toolbox. They have been applied to the tasks of novel transcript identification, elucidation of transcription factor binding sites, detection of methylated DNA and several other applications in several model organisms. These experiments are being conducted at increasingly finer resolutions as the microarray technology enjoys increasingly greater feature densities. The increased densities naturally lead to increased data analysis requirements. Specifically, the most widely employed algorithm for tiling array analysis involves smoothing observed signals by computing pseudomedians within sliding windows, a O(n2logn) calculation in each window. This poor time complexity is an issue for tiling array analysis and could prove to be a real bottleneck as tiling microarray experiments become grander in scope and finer in resolution. We therefore implemented Monahan's HLQEST algorithm that reduces the runtime complexity for computing the pseudomedian of n numbers to O(nlogn) from O(n2logn). For a representative tiling microarray dataset, this modification reduced the smoothing procedure's runtime by nearly 90%. We then leveraged the fact that elements within sliding windows remain largely unchanged in overlapping windows (as one slides across genomic space) to further reduce computation by an additional 43%. This was achieved by the application of skip lists to maintaining a sorted list of values from window to window. This sorted list could be maintained with simple O(log n) inserts and deletes. We illustrate the favorable scaling properties of our algorithms with both time complexity analysis and benchmarking on synthetic datasets. Tiling microarray analyses that rely upon a sliding window pseudomedian calculation can require many hours of computation. We have eased this requirement significantly by implementing efficient algorithms that scale well with genomic feature density. This result not only speeds the current standard analyses, but also makes possible ones where many iterations of the filter may be required, such as might be required in a bootstrap or parameter estimation setting. Source code and executables are available at http://tiling.gersteinlab.org/pseudomedian/.

  10. An efficient pseudomedian filter for tiling microrrays

    PubMed Central

    Royce, Thomas E; Carriero, Nicholas J; Gerstein, Mark B

    2007-01-01

    Background Tiling microarrays are becoming an essential technology in the functional genomics toolbox. They have been applied to the tasks of novel transcript identification, elucidation of transcription factor binding sites, detection of methylated DNA and several other applications in several model organisms. These experiments are being conducted at increasingly finer resolutions as the microarray technology enjoys increasingly greater feature densities. The increased densities naturally lead to increased data analysis requirements. Specifically, the most widely employed algorithm for tiling array analysis involves smoothing observed signals by computing pseudomedians within sliding windows, a O(n2logn) calculation in each window. This poor time complexity is an issue for tiling array analysis and could prove to be a real bottleneck as tiling microarray experiments become grander in scope and finer in resolution. Results We therefore implemented Monahan's HLQEST algorithm that reduces the runtime complexity for computing the pseudomedian of n numbers to O(nlogn) from O(n2logn). For a representative tiling microarray dataset, this modification reduced the smoothing procedure's runtime by nearly 90%. We then leveraged the fact that elements within sliding windows remain largely unchanged in overlapping windows (as one slides across genomic space) to further reduce computation by an additional 43%. This was achieved by the application of skip lists to maintaining a sorted list of values from window to window. This sorted list could be maintained with simple O(log n) inserts and deletes. We illustrate the favorable scaling properties of our algorithms with both time complexity analysis and benchmarking on synthetic datasets. Conclusion Tiling microarray analyses that rely upon a sliding window pseudomedian calculation can require many hours of computation. We have eased this requirement significantly by implementing efficient algorithms that scale well with genomic feature density. This result not only speeds the current standard analyses, but also makes possible ones where many iterations of the filter may be required, such as might be required in a bootstrap or parameter estimation setting. Source code and executables are available at . PMID:17555595

  11. The Spatially Resolved H(alpha)-Emitting Wind Structure of P Cygni

    DTIC Science & Technology

    2010-06-01

    using radio and optical interferometry, as well as direct imaging with adaptive optics (AO). Radio interferometric observations detect the nebula around...to structures in the nebula of P Cyg that are more than an order of magnitude smaller. Therefore, optical interferometry provides a unique window of...resolved the outer Hα-emitting region of the extended envelope, but detected signatures of clumping. Although, the angular scales sampled with a 1.52 m

  12. Advances in Mixed Signal Processing for Regional and Teleseismic Arrays

    DTIC Science & Technology

    2006-08-15

    1: Mixture of signals from two earthquakes from south of Africa and the Philippines observed at USAEDS long-period seismic array in Korea. Correct...window where the detector will miss valid signals . 2 Approaches to detecting signals on arrays all focus on the basic model that expresses the observed...possible use in detecting infrasound signals . The approach is based on orthogonal- ity properties of the eigen vectors of the spectral matrix under a

  13. PSK Shift Timing Information Detection Using Image Processing and a Matched Filter

    DTIC Science & Technology

    2009-09-01

    phase shifts are enhanced.  Develop, design, and test the resulting phase shift identification scheme. xx  Develop, design, and test an optional...and the resulting phase shift identification algorithm is investigated for SNR levels in the range -2dB to 12 dB. Detection performances are derived...test the resulting phase shift identification scheme.  Develop, design, and test an optional analysis window overlapping technique to improve phase

  14. The use and misuse of aircraft and missile RCS statistics

    NASA Astrophysics Data System (ADS)

    Bishop, Lee R.

    1991-07-01

    Both static and dynamic radar cross sections measurements are used for RCS predictions, but the static data are less complete than the dynamic. Integrated dynamics RCS data also have limitations for prediction radar detection performance. When raw static data are properly used, good first-order detection estimates are possible. The research to develop more-usable RCS statistics is reviewed, and windowing techniques for creating probability density functions from static RCS data are discussed.

  15. Integration of CW / Radionucleotide Detection Systems to the Fido XT Explosives Detector

    DTIC Science & Technology

    2008-07-31

    explosives detected by the Fido XT. Additionally, a platform for centralized storage and processing of Fido XT data files collected in house, targeted...fused silica glass wool (obtained from Restek). The fluorescent signal was easily washed out of the flow cell by a nominal amount of buffer...detector with supporting NRE was processed . The Interceptor components were configured to operate under a Windows CE processor environment, and to

  16. Fuzzy CMAC With incremental Bayesian Ying-Yang learning and dynamic rule construction.

    PubMed

    Nguyen, M N

    2010-04-01

    Inspired by the philosophy of ancient Chinese Taoism, Xu's Bayesian ying-yang (BYY) learning technique performs clustering by harmonizing the training data (yang) with the solution (ying). In our previous work, the BYY learning technique was applied to a fuzzy cerebellar model articulation controller (FCMAC) to find the optimal fuzzy sets; however, this is not suitable for time series data analysis. To address this problem, we propose an incremental BYY learning technique in this paper, with the idea of sliding window and rule structure dynamic algorithms. Three contributions are made as a result of this research. First, an online expectation-maximization algorithm incorporated with the sliding window is proposed for the fuzzification phase. Second, the memory requirement is greatly reduced since the entire data set no longer needs to be obtained during the prediction process. Third, the rule structure dynamic algorithm with dynamically initializing, recruiting, and pruning rules relieves the "curse of dimensionality" problem that is inherent in the FCMAC. Because of these features, the experimental results of the benchmark data sets of currency exchange rates and Mackey-Glass show that the proposed model is more suitable for real-time streaming data analysis.

  17. Does premature elevated progesterone on the day of trigger increase spontaneous abortion rates in fresh and subsequent frozen embryo transfers?

    PubMed

    Healy, Mae; Patounakis, George; Zanelotti, Austin; Devine, Kate; DeCherney, Alan; Levy, Michael; Hill, Micah J

    2017-06-01

    Recent evidence has shown elevated progesterone (P) advances the endometrium in fresh ART cycles, creating asynchrony with the embryo and thus implantation failure and decreased live birth rates. If the window of implantation is closing as the embryo attempts to implant, there may be difficulty with trophoblastic invasion, leading to failure of early pregnancies. Our objective was to evaluate if P on the day of trigger was associated with spontaneous abortion (SAB) rates in fresh ART transfers. This was a retrospective cohort study involving fresh autologous and FET cycles from 2011 to 2013. The main outcome was spontaneous abortion rates. About 4123 fresh and FET transfer cycles were included which resulted in 1547 fresh and 491 FET pregnancies. The overall SAB rate was 20% among fresh cycles and 19% in FET cycles. P on the day of trigger, as a continuous variable or when > 2 ng/mL, was not associated with SAB in fresh cycles. Similar results were found after adjusting for age, embryo quality, and embryo stage. Despite elevated P likely advancing the window of implantation, once implantation occurs, pregnancies were no longer negatively impacted by progesterone.

  18. Natural history collections as windows on evolutionary processes.

    PubMed

    Holmes, Michael W; Hammond, Talisin T; Wogan, Guinevere O U; Walsh, Rachel E; LaBarbera, Katie; Wommack, Elizabeth A; Martins, Felipe M; Crawford, Jeremy C; Mack, Katya L; Bloch, Luke M; Nachman, Michael W

    2016-02-01

    Natural history collections provide an immense record of biodiversity on Earth. These repositories have traditionally been used to address fundamental questions in biogeography, systematics and conservation. However, they also hold the potential for studying evolution directly. While some of the best direct observations of evolution have come from long-term field studies or from experimental studies in the laboratory, natural history collections are providing new insights into evolutionary change in natural populations. By comparing phenotypic and genotypic changes in populations through time, natural history collections provide a window into evolutionary processes. Recent studies utilizing this approach have revealed some dramatic instances of phenotypic change over short timescales in response to presumably strong selective pressures. In some instances, evolutionary change can be paired with environmental change, providing a context for potential selective forces. Moreover, in a few cases, the genetic basis of phenotypic change is well understood, allowing for insight into adaptive change at multiple levels. These kinds of studies open the door to a wide range of previously intractable questions by enabling the study of evolution through time, analogous to experimental studies in the laboratory, but amenable to a diversity of species over longer timescales in natural populations. © 2016 John Wiley & Sons Ltd.

  19. Antenna design and implementation for the future space Ultra-Long wavelength radio telescope

    NASA Astrophysics Data System (ADS)

    Chen, Linjie; Aminaei, Amin; Gurvits, Leonid I.; Wolt, Marc Klein; Pourshaghaghi, Hamid Reza; Yan, Yihua; Falcke, Heino

    2018-04-01

    In radio astronomy, the Ultra-Long Wavelengths (ULW) regime of longer than 10 m (frequencies below 30 MHz), remains the last virtually unexplored window of the celestial electromagnetic spectrum. The strength of the science case for extending radio astronomy into the ULW window is growing. However, the opaqueness of the Earth's ionosphere makes ULW observations by ground-based facilities practically impossible. Furthermore, the ULW spectrum is full of anthropogenic radio frequency interference (RFI). The only radical solution for both problems is in placing an ULW astronomy facility in space. We present a concept of a key element of a space-borne ULW array facility, an antenna that addresses radio astronomical specifications. A tripole-type antenna and amplifier are analysed as a solution for ULW implementation. A receiver system with a low power dissipation is discussed as well. The active antenna is optimized to operate at the noise level defined by the celestial emission in the frequency band 1 - 30 MHz. Field experiments with a prototype tripole antenna enabled estimates of the system noise temperature. They indicated that the proposed concept meets the requirements of a space-borne ULW array facility.

  20. Cooperativity among Short Amyloid Stretches in Long Amyloidogenic Sequences

    PubMed Central

    He, Zhisong; Shi, Xiaohe; Feng, Kaiyan; Ma, Buyong; Cai, Yu-Dong

    2012-01-01

    Amyloid fibrillar aggregates of polypeptides are associated with many neurodegenerative diseases. Short peptide segments in protein sequences may trigger aggregation. Identifying these stretches and examining their behavior in longer protein segments is critical for understanding these diseases and obtaining potential therapies. In this study, we combined machine learning and structure-based energy evaluation to examine and predict amyloidogenic segments. Our feature selection method discovered that windows consisting of long amino acid segments of ∼30 residues, instead of the commonly used short hexapeptides, provided the highest accuracy. Weighted contributions of an amino acid at each position in a 27 residue window revealed three cooperative regions of short stretch, resemble the β-strand-turn-β-strand motif in A-βpeptide amyloid and β-solenoid structure of HET-s(218–289) prion (C). Using an in-house energy evaluation algorithm, the interaction energy between two short stretches in long segment is computed and incorporated as an additional feature. The algorithm successfully predicted and classified amyloid segments with an overall accuracy of 75%. Our study revealed that genome-wide amyloid segments are not only dependent on short high propensity stretches, but also on nearby residues. PMID:22761773

  1. Natural history collections as windows on evolutionary processes

    PubMed Central

    Holmes, Michael W.; Hammond, Talisin T.; Wogan, Guinevere O.U.; Walsh, Rachel E.; LaBarbera, Katie; Wommack, Elizabeth A.; Martins, Felipe M.; Crawford, Jeremy C.; Mack, Katya L.; Bloch, Luke M.; Nachman, Michael W.

    2016-01-01

    Natural history collections provide an immense record of biodiversity on Earth. These repositories have traditionally been used to address fundamental questions in biogeography, systematics, and conservation. However, they also hold the potential for studying evolution directly. While some of the best direct observations of evolution have come from long-term field studies or from experimental studies in the lab, natural history collections are providing new insights into evolutionary change in natural populations. By comparing phenotypic and genotypic changes in populations through time, natural history collections provide a window into evolutionary processes. Recent studies utilizing this approach have revealed some dramatic instances of phenotypic change over short time scales in response to presumably strong selective pressures. In some instances evolutionary change can be paired with environmental change, providing a context for potential selective forces. Moreover, in a few cases, the genetic basis of phenotypic change is well understood, allowing for insight into adaptive change at multiple levels. These kinds of studies open the door to a wide range of previously intractable questions by enabling the study of evolution through time, analogous to experimental studies in the laboratory, but amenable to a diversity of species over longer timescales in natural populations. PMID:26757135

  2. Discrimination of complex synthetic echoes by an echolocating bottlenose dolphin

    NASA Astrophysics Data System (ADS)

    Helweg, David A.; Moore, Patrick W.; Dankiewicz, Lois A.; Zafran, Justine M.; Brill, Randall L.

    2003-02-01

    Bottlenose dolphins (Tursiops truncatus) detect and discriminate underwater objects by interrogating the environment with their native echolocation capabilities. Study of dolphins' ability to detect complex (multihighlight) signals in noise suggest echolocation object detection using an approximate 265-μs energy integration time window sensitive to the echo region of highest energy or containing the highlight with highest energy. Backscatter from many real objects contains multiple highlights, distributed over multiple integration windows and with varying amplitude relationships. This study used synthetic echoes with complex highlight structures to test whether high-amplitude initial highlights would interfere with discrimination of low-amplitude trailing highlights. A dolphin was trained to discriminate two-highlight synthetic echoes using differences in the center frequencies of the second highlights. The energy ratio (ΔdB) and the timing relationship (ΔT) between the first and second highlights were manipulated. An iso-sensitivity function was derived using a factorial design testing ΔdB at -10, -15, -20, and -25 dB and ΔT at 10, 20, 40, and 80 μs. The results suggest that the animal processed multiple echo highlights as separable analyzable features in the discrimination task, perhaps perceived through differences in spectral rippling across the duration of the echoes.

  3. Large format 15μm pitch XBn detector

    NASA Astrophysics Data System (ADS)

    Karni, Yoram; Avnon, Eran; Ben Ezra, Michael; Berkowitz, Eyal; Cohen, Omer; Cohen, Yossef; Dobromislin, Roman; Hirsh, Itay; Klin, Olga; Klipstein, Philip; Lukomsky, Inna; Nitzani, Michal; Pivnik, Igor; Rozenberg, Omer; Shtrichman, Itay; Singer, Michael; Sulimani, Shay; Tuito, Avi; Weiss, Eliezer

    2014-06-01

    Over the past few years, a new type of High Operating Temperature (HOT) photon detector has been developed at SCD, which operates in the blue part of the MWIR atmospheric window (3.4 - 4.2 μm). This window is generally more transparent than the red part of the MWIR window (4.4 - 4.9 μm), and thus is especially useful for mid and long range applications. The detector has an InAsSb active layer and is based on the new "XBn" device concept, which eliminates Generation-Recombination dark current and enables operation at temperatures of 150K or higher, while maintaining excellent image quality. Such high operating temperatures reduce the cooling requirements of Focal Plane Array (FPA) detectors dramatically, and allow the use of a smaller closed-cycle Stirling cooler. As a result, the complete Integrated Detector Cooler Assembly (IDCA) has about 60% lower power consumption and a much longer lifetime compared with IDCAs based on standard InSb detectors and coolers operating at 77K. In this work we present a new large format IDCA designed for 150K operation. The 15 μm pitch 1280×1024 FPA is based on SCD's XBn technology and digital Hercules ROIC. The FPA is housed in a robust Dewar and is integrated with Ricor's K508N Stirling cryo-cooler. The IDCA has a weight of ~750 gram and its power consumption is ~ 5.5 W at a frame rate of 100Hz. The Mean Time to Failure (MTTF) of the IDCA is more than 20,000 hours, greatly facilitating 24/7 operation.

  4. A unified approach to the study of temporal, correlational, and rate coding.

    PubMed

    Panzeri, S; Schultz, S R

    2001-06-01

    We demonstrate that the information contained in the spike occurrence times of a population of neurons can be broken up into a series of terms, each reflecting something about potential coding mechanisms. This is possible in the coding regime in which few spikes are emitted in the relevant time window. This approach allows us to study the additional information contributed by spike timing beyond that present in the spike counts and to examine the contributions to the whole information of different statistical properties of spike trains, such as firing rates and correlation functions. It thus forms the basis for a new quantitative procedure for analyzing simultaneous multiple neuron recordings and provides theoretical constraints on neural coding strategies. We find a transition between two coding regimes, depending on the size of the relevant observation timescale. For time windows shorter than the timescale of the stimulus-induced response fluctuations, there exists a spike count coding phase, in which the purely temporal information is of third order in time. For time windows much longer than the characteristic timescale, there can be additional timing information of first order, leading to a temporal coding phase in which timing information may affect the instantaneous information rate. In this new framework, we study the relative contributions of the dynamic firing rate and correlation variables to the full temporal information, the interaction of signal and noise correlations in temporal coding, synergy between spikes and between cells, and the effect of refractoriness. We illustrate the utility of the technique by analyzing a few cells from the rat barrel cortex.

  5. Predicting Good Features for Image Geo-Localization Using Per-Bundle VLAD (Open Access)

    DTIC Science & Technology

    2016-02-18

    transient scene elements (pedestrians, cars, billboards) and ubiquitous objects (trees, fences, signage ) can introduce obfuscating cues into the geo...windows, charac- teristic wall patterns, and letters on signage are detected as positive elements, while features from trees, people, car wheels

  6. ZEUS-2: a second generation submillimeter grating spectrometer for exploring distant galaxies

    NASA Astrophysics Data System (ADS)

    Ferkinhoff, Carl; Nikola, Thomas; Parshley, Stephen C.; Stacey, Gordon J.; Irwin, Kent D.; Cho, Hsiao-Mei; Halpern, Mark

    2010-07-01

    ZEUS-2, the second generation (z)Redshift and Early Universe Spectrometer, like its predecessor is a moderate resolution (R~1000) long-slit, echelle grating spectrometer optimized for the detection of faint, broad lines from distant galaxies. It is designed for studying star-formation across cosmic time. ZEUS-2 employs three TES bolometer arrays (555 pixels total) to deliver simultaneous, multi-beam spectra in up to 4 submillimeter windows. The NIST Boulder-built arrays operate at ~100mK and are readout via SQUID multiplexers and the Multi-Channel Electronics from the University of British Columbia. The instrument is cooled via a pulse-tube cooler and two-stage ADR. Various filter configurations give ZEUS-2 access to 7 different telluric windows from 200 to 850 micron enabling the simultaneous mapping of lines from extended sources or the simultaneous detection of the 158 micron [CII] line and the [NII] 122 or 205 micron lines from z = 1-2 galaxies. ZEUS-2 is designed for use on the CSO, APEX and possibly JCMT.

  7. Residual Silicone Detection. [external tank and solid rocket booster surfaces

    NASA Technical Reports Server (NTRS)

    Smith, T.

    1980-01-01

    Both photoelectron emission and ellipsometry proved successful in detecting silicone contamination on unpainted and epoxy painted metal surfaces such as those of the external tank and the solid rocket booster. Great success was achieved using photoelectron emission (PEE). Panels were deliberately contaminated to controlled levels and then mapped with PEE to reveal the areas and levels that were contaminated. The panels were then tested with regard to adhesive properties. Tapes were bonded over the contaminated and uncontaminated regions and the peel force was measured, or the contaminated panels were bonded (with CPR 483 foam) to uncontaminated panels and made into lap shear specimens. Other panels were bonded and made into wedge specimens for hydrothermal stress endurance tests. Strong adhesion resulted if the PEE signal fell within an acceptance window, but was poor outside the acceptance window. A prototype instrument is being prepared which can automatically be scanned over the external liquid hydrogen tank and identify those regions that are contaminated and will cause bond degradation.

  8. Comparisons of neural networks to standard techniques for image classification and correlation

    NASA Technical Reports Server (NTRS)

    Paola, Justin D.; Schowengerdt, Robert A.

    1994-01-01

    Neural network techniques for multispectral image classification and spatial pattern detection are compared to the standard techniques of maximum-likelihood classification and spatial correlation. The neural network produced a more accurate classification than maximum-likelihood of a Landsat scene of Tucson, Arizona. Some of the errors in the maximum-likelihood classification are illustrated using decision region and class probability density plots. As expected, the main drawback to the neural network method is the long time required for the training stage. The network was trained using several different hidden layer sizes to optimize both the classification accuracy and training speed, and it was found that one node per class was optimal. The performance improved when 3x3 local windows of image data were entered into the net. This modification introduces texture into the classification without explicit calculation of a texture measure. Larger windows were successfully used for the detection of spatial features in Landsat and Magellan synthetic aperture radar imagery.

  9. Power M-mode Doppler (PMD) for observing cerebral blood flow and tracking emboli.

    PubMed

    Moehring, Mark A; Spencer, Merrill P

    2002-01-01

    Difficulties in location of transcranial ultrasound (US) windows and blood flow in cerebral vessels, and unambiguous detection of microemboli, have limited expansion of transcranial Doppler US. We developed a new transcranial Doppler modality, power M-mode Doppler (PMD), for addressing these issues. A 2-MHz digital Doppler (Spencer Technologies TCD100M) having 33 sample gates placed with 2-mm spacing was configured to display Doppler signal power, colored red and blue for directionality, in an M-mode format. The spectrogram from a user-selected depth was displayed simultaneously. This system was then explored on healthy subjects and patients presenting with varying cerebrovascular pathology. PMD facilitated window location and alignment of the US beam to view blood flow from multiple vessels simultaneously, without sound or spectral clues. Microemboli appeared as characteristic sloping high-power tracks in the PMD image. Power M-mode Doppler is a new paradigm facilitating vessel location, diagnosis, monitoring and microembolus detection.

  10. Adhesion signals of phospholipid vesicles at an electrified interface.

    PubMed

    DeNardis, Nadica Ivošević; Žutić, Vera; Svetličić, Vesna; Frkanec, Ruža

    2012-09-01

    General adhesion behavior of phospholipid vesicles was examined in a wide range of potentials at the mercury electrode by recording time-resolved adhesion signals. It was demonstrated that adhesion-based detection is sensitive to polar headgroups in phospholipid vesicles. We identified a narrow potential window around the point of zero charge of the electrode where the interaction of polar headgroups of phosphatidylcholine vesicles with the substrate is manifested in the form of bidirectional signals. The bidirectional signal is composed of the charge flow due to the nonspecific interaction of vesicle adhesion and spreading and of the charge flow due to a specific interaction of the negatively charged electrode and the most exposed positively charged choline headgroups. These signals are expected to appear only when the electrode surface charge density is less than the surface charge density of the choline groups at the contact interface. In comparison, for the negatively charged phosphatidylserine vesicles, we identified the potential window at the mercury electrode where charge compensation takes place, and bidirectional signals were not detected.

  11. Pulse frequency and soil-litter mixing alter the control of cumulative precipitation over litter decomposition.

    PubMed

    Joly, François-Xavier; Kurupas, Kelsey L; Throop, Heather L

    2017-09-01

    Macroclimate has traditionally been considered the predominant driver of litter decomposition. However, in drylands, cumulative monthly or annual precipitation typically fails to predict decomposition. In these systems, the windows of opportunity for decomposer activity may rather depend on the precipitation frequency and local factors affecting litter desiccation, such as soil-litter mixing. We used a full-factorial microcosm experiment to disentangle the relative importance of cumulative precipitation, pulse frequency, and soil-litter mixing on litter decomposition. Decomposition, measured as litter carbon loss, saturated with increasing cumulative precipitation when pulses were large and infrequent, suggesting that litter moisture no longer increased and/or microbial activity was no longer limited by water availability above a certain pulse size. More frequent precipitation pulses led to increased decomposition at high levels of cumulative precipitation. Soil-litter mixing consistently increased decomposition, with greatest relative increase (+194%) under the driest conditions. Collectively, our results highlight the need to consider precipitation at finer temporal scale and incorporate soil-litter mixing as key driver of decomposition in drylands. © 2017 by the Ecological Society of America.

  12. Identification of a hybridization window that facilitates sizeable reductions of pollen-mediated gene flow in spring wheat.

    PubMed

    Willenborg, Christian J; Brûlé-Babel, Anita L; Van Acker, Rene C

    2010-06-01

    Transgenic wheat (Triticum aestivum L.) with improved agronomic traits is currently being field-tested. Gene flow in space is well-documented, but isolation in time has not received comparable attention. Here, we report the results of a field experiment that investigated reductions in intraspecific gene flow associated with temporal isolation of flowering between T. aestivum conspecifics. Pollen-mediated gene flow (PMGF) between an imazamox-resistant (IR) volunteer wheat population and a non-IR spring wheat crop was assessed over a range of volunteer emergence timings and plant population densities that collectively promoted flowering asynchrony. Natural hybridization events between the two populations were detected by phenotypically scoring plants in F(1) populations followed by verification with Mendelian segregation ratios in the F(1:2) lines. Based on the examination of >545,000 seedlings, we identified a hybridization window in spring wheat approximately 125 growing degree-days (GDD) in length. We found a sizeable reduction (two- to four-fold) in gene flow frequencies when flowering occurred outside of this window. The hybridization window identified in this research also will serve to temporally isolate neighboring wheat crops. However, strict control of volunteer populations or spatial isolation of neighbouring crops emerging within a 125 GDD hybridization window will be necessary to maintain low frequencies of PMGF in spring wheat fields. The model developed herein also is likely to be applicable to other wind-pollinated species.

  13. Novel application of windowed beamforming function imaging for FLGPR

    NASA Astrophysics Data System (ADS)

    Xique, Ismael J.; Burns, Joseph W.; Thelen, Brian J.; LaRose, Ryan M.

    2018-04-01

    Backprojection of cross-correlated array data, using algorithms such as coherent interferometric imaging (Borcea, et al., 2006), has been advanced as a method to improve the statistical stability of images of targets in an inhomogeneous medium. Recently, the Windowed Beamforming Energy (WBE) function algorithm has been introduced as a functionally equivalent approach, which is significantly less computationally burdensome (Borcea, et al., 2011). WBE produces similar results through the use of a quadratic function summing signals after beamforming in transmission and reception, and windowing in the time domain. We investigate the application of WBE to improve the detection of buried targets with forward looking ground penetrating MIMO radar (FLGPR) data. The formulation of WBE as well the software implementation of WBE for the FLGPR data collection will be discussed. WBE imaging results are compared to standard backprojection and Coherence Factor imaging. Additionally, the effectiveness of WBE on field-collected data is demonstrated qualitatively through images and quantitatively through the use of a CFAR statistic on buried targets of a variety of contrast levels.

  14. Ultra-broadband THz time-domain spectroscopy of common polymers using THz air photonics.

    PubMed

    D'Angelo, Francesco; Mics, Zoltán; Bonn, Mischa; Turchinovich, Dmitry

    2014-05-19

    Terahertz-range dielectric properties of the common polymers low-density polyethylene (LDPE), cyclic olefin/ethylene copolymer (TOPAS®), polyamide-6 (PA6), and polytetrafluoroethylene (PTFE or Teflon®) are characterized in the ultra-broadband frequency window 2-15 THz, using a THz time-domain spectrometer employing air-photonics for the generation and detection of single-cycle sub-50 fs THz transients. The time domain measurements provide direct access to both the absorption and refractive index spectra. The polymers LDPE and TOPAS® demonstrate negligible absorption and spectrally-flat refractive index across the entire spectroscopy window, revealing the high potential of these polymers for applications in THz photonics such as ultra-broadband polymer-based dielectric mirrors, waveguides, and fibers. Resonant high-frequency polar vibrational modes are observed and assigned in polymers PA6 and PTFE, and their dielectric functions in the complete frequency window 2-15 THz are theoretically reproduced. Our results demonstrate the potential of ultra-broadband air-photonics-based THz time domain spectroscopy as a valuable analytic tool for materials science.

  15. Bellco Formula Domus Home Care System.

    PubMed

    Trewin, Elizabeth

    2004-01-01

    There are certain characteristics in a dialysis machine that would be desirable for use in home and limited care environments. These features relate to safety, ease of use, consideration of physical space, and reliability. The Bellco Formula Domus Home Care System was designed to meet all these requirements. Bellco's philosophy of patient treatment centers on global biocompatibility. This is evident in the design of the Formula Domus Home Care System. It has the smallest hydraulic fluid pathway of any dialysis machine on the market. Formula is capable of preparing ultrapure dialysate. The ultrafiltration measurement mechanism, the patented Coriolis flow meter, measures the mass of the dialysate, not the volume. For this reason it is the only dialysis machine that detects actual backfiltration, not just the theoretical possibility of it based on transmembrane pressure. The Coriolis flow meter also ensures that dialysate flow is a true single pass. The operator interface is a single window operating control. It is possible to select up to 14 different languages. There is an online help key to assist patients with troubleshooting. Programmable start-up and shutdown times save time for the patient. Formula is the only dialysis machine to offer a backup battery feature. Formula is capable of communicating with any software available. The focus on global biocompatibility ensures the best quality dialysis treatments for a population of patients who will likely remain on dialysis for a longer period of time than conventional dialysis patients.

  16. Latitudinal and photic effects on diel foraging and predation risk in freshwater pelagic ecosystems

    USGS Publications Warehouse

    Hansen, Adam G.; Beauchamp, David A.

    2014-01-01

    1. Clark & Levy (American Naturalist, 131, 1988, 271–290) described an antipredation window for smaller planktivorous fish during crepuscular periods when light permits feeding on zooplankton, but limits visual detection by piscivores. Yet, how the window is influenced by the interaction between light regime, turbidity and cloud cover over a broad latitudinal gradi- ent remains unexplored. 2. We evaluated how latitudinal and seasonal shifts in diel light regimes alter the foraging- risk environment for visually feeding planktivores and piscivores across a natural range of turbidities and cloud covers. Pairing a model of aquatic visual feeding with a model of sun and moon illuminance, we estimated foraging rates of an idealized planktivore and piscivore over depth and time across factorial combinations of latitude (0–70°), turbidity (01–5 NTU) and cloud cover (clear to overcast skies) during the summer solstice and autumnal equinox. We evaluated the foraging-risk environment based on changes in the magnitude, duration and peak timing of the antipredation window. 3. The model scenarios generated up to 10-fold shifts in magnitude, 24-fold shifts in duration and 55-h shifts in timing of the peak antipredation window. The size of the window increased with latitude. This pattern was strongest during the solstice. In clear water at low turbidity (01–05 NTU), peaks in the magnitude and duration of the window formed at 57–60° latitude, before falling to near zero as surface waters became saturated with light under a midnight sun and clear skies at latitudes near 70°. Overcast dampened the midnight sun enough to allow larger windows to form in clear water at high latitudes. Conversely, at turbidities ≥2 NTU, greater reductions in the visual range of piscivores than planktivores created a window for long periods at high latitudes. Latitudinal dependencies were essentially lost during the equinox, indicating a progressive compression of the window from early summer into autumn. 4. Model results show that diel-seasonal foraging and predation risk in freshwater pelagic ecosystems changes considerably with latitude, turbidity and cloud cover. These changes alter the structure of pelagic predator–prey interactions, and in turn, the broader role of pelagic consumers in habitat coupling in lakes. 

  17. Noise-tolerant instantaneous heart rate and R-peak detection using short-term autocorrelation for wearable healthcare systems.

    PubMed

    Fujii, Takahide; Nakano, Masanao; Yamashita, Ken; Konishi, Toshihiro; Izumi, Shintaro; Kawaguchi, Hiroshi; Yoshimoto, Masahiko

    2013-01-01

    This paper describes a robust method of Instantaneous Heart Rate (IHR) and R-peak detection from noisy electrocardiogram (ECG) signals. Generally, the IHR is calculated from the R-wave interval. Then, the R-waves are extracted from the ECG using a threshold. However, in wearable bio-signal monitoring systems, noise increases the incidence of misdetection and false detection of R-peaks. To prevent incorrect detection, we introduce a short-term autocorrelation (STAC) technique and a small-window autocorrelation (SWAC) technique, which leverages the similarity of QRS complex waveforms. Simulation results show that the proposed method improves the noise tolerance of R-peak detection.

  18. Arduino-based noise robust online heart-rate detection.

    PubMed

    Das, Sangita; Pal, Saurabh; Mitra, Madhuchhanda

    2017-04-01

    This paper introduces a noise robust real time heart rate detection system from electrocardiogram (ECG) data. An online data acquisition system is developed to collect ECG signals from human subjects. Heart rate is detected using window-based autocorrelation peak localisation technique. A low-cost Arduino UNO board is used to implement the complete automated process. The performance of the system is compared with PC-based heart rate detection technique. Accuracy of the system is validated through simulated noisy ECG data with various levels of signal to noise ratio (SNR). The mean percentage error of detected heart rate is found to be 0.72% for the noisy database with five different noise levels.

  19. Two critical periods in early visual cortex during figure-ground segregation.

    PubMed

    Wokke, Martijn E; Sligte, Ilja G; Steven Scholte, H; Lamme, Victor A F

    2012-11-01

    The ability to distinguish a figure from its background is crucial for visual perception. To date, it remains unresolved where and how in the visual system different stages of figure-ground segregation emerge. Neural correlates of figure border detection have consistently been found in early visual cortex (V1/V2). However, areas V1/V2 have also been frequently associated with later stages of figure-ground segregation (such as border ownership or surface segregation). To causally link activity in early visual cortex to different stages of figure-ground segregation, we briefly disrupted activity in areas V1/V2 at various moments in time using transcranial magnetic stimulation (TMS). Prior to stimulation we presented stimuli that made it possible to differentiate between figure border detection and surface segregation. We concurrently recorded electroencephalographic (EEG) signals to examine how neural correlates of figure-ground segregation were affected by TMS. Results show that disruption of V1/V2 in an early time window (96-119 msec) affected detection of figure stimuli and affected neural correlates of figure border detection, border ownership, and surface segregation. TMS applied in a relatively late time window (236-259 msec) selectively deteriorated performance associated with surface segregation. We conclude that areas V1/V2 are not only essential in an early stage of figure-ground segregation when figure borders are detected, but subsequently causally contribute to more sophisticated stages of figure-ground segregation such as surface segregation.

  20. Two critical periods in early visual cortex during figure–ground segregation

    PubMed Central

    Wokke, Martijn E; Sligte, Ilja G; Steven Scholte, H; Lamme, Victor A F

    2012-01-01

    The ability to distinguish a figure from its background is crucial for visual perception. To date, it remains unresolved where and how in the visual system different stages of figure–ground segregation emerge. Neural correlates of figure border detection have consistently been found in early visual cortex (V1/V2). However, areas V1/V2 have also been frequently associated with later stages of figure–ground segregation (such as border ownership or surface segregation). To causally link activity in early visual cortex to different stages of figure–ground segregation, we briefly disrupted activity in areas V1/V2 at various moments in time using transcranial magnetic stimulation (TMS). Prior to stimulation we presented stimuli that made it possible to differentiate between figure border detection and surface segregation. We concurrently recorded electroencephalographic (EEG) signals to examine how neural correlates of figure–ground segregation were affected by TMS. Results show that disruption of V1/V2 in an early time window (96–119 msec) affected detection of figure stimuli and affected neural correlates of figure border detection, border ownership, and surface segregation. TMS applied in a relatively late time window (236–259 msec) selectively deteriorated performance associated with surface segregation. We conclude that areas V1/V2 are not only essential in an early stage of figure–ground segregation when figure borders are detected, but subsequently causally contribute to more sophisticated stages of figure–ground segregation such as surface segregation. PMID:23170239

  1. Free and open source software for the manipulation of digital images.

    PubMed

    Solomon, Robert W

    2009-06-01

    Free and open source software is a type of software that is nearly as powerful as commercial software but is freely downloadable. This software can do almost everything that the expensive programs can. GIMP (gnu image manipulation program) is the free program that is comparable to Photoshop, and versions are available for Windows, Macintosh, and Linux platforms. This article briefly describes how GIMP can be installed and used to manipulate radiology images. It is no longer necessary to budget large amounts of money for high-quality software to achieve the goals of image processing and document creation because free and open source software is available for the user to download at will.

  2. Growth hormone in sports: detecting the doped or duped.

    PubMed

    Ho, Ken K Y; Nelson, Anne E

    2011-01-01

    Doping with growth hormone (GH) is banned; however, there is anecdotal evidence that it is widely abused. GH is reportedly often used in combination with anabolic steroids at high doses for several months. Development of a robust test for detecting GH has been challenging since recombinant human 22-kDa GH used in doping is indistinguishable analytically from endogenous GH and there are wide physiological fluctuations in circulating GH concentrations. One approach to GH testing is based on measurement of different circulating GH isoforms using immunoassays that differentiate between 22-kDa and other GH isoforms. Administration of 22-kDa GH results in a change in its abundance relative to other endogenous pituitary GH isoforms. The differential isoform method is, however, limited by its short time window of detection. A second approach that extends the time window of detection is based on detection of increased levels of circulating GH-responsive proteins, such as the insulin-like growth factor (IGF) axis and collagen peptides. As age and gender are the major determinants of variability for IGF-I and the collagen markers, a test based on these markers must take these factors into account. Extensive data now validate the GH-responsive marker approach, and implementation is largely dependent on establishing an assured supply of standardized assays. Robust tests are available to detect GH and enforce the ban on its abuse in sports. Novel approaches that include gene expression and proteomic profiling must continue to be pursued to expand the repertoire of testing approaches available and to maintain deterrence of GH doping. Copyright © 2011 S. Karger AG, Basel.

  3. The Early Detection of Pancreatic Cancer: What Will it Take to Diagnose and Treat Curable Pancreatic Neoplasia?

    PubMed Central

    Lennon, Anne Marie; Wolfgang, Christopher L.; Canto, Marcia Irene; Klein, Alison P.; Herman, Joseph M.; Goggins, Michael; Fishman, Elliot K.; Kamel, Ihab; Weiss, Matthew J.; Diaz, Luis A.; Papadopoulos, Nickolas; Kinzler, Kenneth W.; Vogelstein, Bert; Hruban, Ralph H.

    2014-01-01

    Pancreatic cancer is the deadliest of all solid malignancies. Early detection offers the best hope for a cure, but characteristics of this disease such as the lack of early clinical symptoms, make the early detection difficult. Recent genetic mapping of the molecular evolution of pancreatic cancer suggests that a large window of opportunity exists for the early detection of pancreatic neoplasia, and developments in cancer genetics offer new, potentially highly specific, approaches for screening for curable pancreatic neoplasia. We review the challenges of screening for early pancreatic neoplasia, as well as opportunities presented by incorporating molecular genetics into these efforts. PMID:24924775

  4. Tables of square-law signal detection statistics for Hann spectra with 50 percent overlap

    NASA Technical Reports Server (NTRS)

    Deans, Stanley R.; Cullers, D. Kent

    1991-01-01

    The Search for Extraterrestrial Intelligence, currently being planned by NASA, will require that an enormous amount of data be analyzed in real time by special purpose hardware. It is expected that overlapped Hann data windows will play an important role in this analysis. In order to understand the statistical implication of this approach, it has been necessary to compute detection statistics for overlapped Hann spectra. Tables of signal detection statistics are given for false alarm rates from 10(exp -14) to 10(exp -1) and signal detection probabilities from 0.50 to 0.99; the number of computed spectra ranges from 4 to 2000.

  5. Material limitations on the detection limit in refractometry.

    PubMed

    Skafte-Pedersen, Peder; Nunes, Pedro S; Xiao, Sanshui; Mortensen, Niels Asger

    2009-01-01

    We discuss the detection limit for refractometric sensors relying on high-Q optical cavities and show that the ultimate classical detection limit is given by min {Δn} ≳ η, with n + iη being the complex refractive index of the material under refractometric investigation. Taking finite Q factors and filling fractions into account, the detection limit declines. As an example we discuss the fundamental limits of silicon-based high-Q resonators, such as photonic crystal resonators, for sensing in a bio-liquid environment, such as a water buffer. In the transparency window (λ ≳ 1100 nm) of silicon the detection limit becomes almost independent on the filling fraction, while in the visible, the detection limit depends strongly on the filling fraction because the silicon absorbs strongly.

  6. Audiovisual Asynchrony Detection in Human Speech

    ERIC Educational Resources Information Center

    Maier, Joost X.; Di Luca, Massimiliano; Noppeney, Uta

    2011-01-01

    Combining information from the visual and auditory senses can greatly enhance intelligibility of natural speech. Integration of audiovisual speech signals is robust even when temporal offsets are present between the component signals. In the present study, we characterized the temporal integration window for speech and nonspeech stimuli with…

  7. A Limited-Vocabulary, Multi-Speaker Automatic Isolated Word Recognition System.

    ERIC Educational Resources Information Center

    Paul, James E., Jr.

    Techniques for automatic recognition of isolated words are investigated, and a computer simulation of a word recognition system is effected. Considered in detail are data acquisition and digitizing, word detection, amplitude and time normalization, short-time spectral estimation including spectral windowing, spectral envelope approximation,…

  8. lcps: Light curve pre-selection

    NASA Astrophysics Data System (ADS)

    Schlecker, Martin

    2018-05-01

    lcps searches for transit-like features (i.e., dips) in photometric data. Its main purpose is to restrict large sets of light curves to a number of files that show interesting behavior, such as drops in flux. While lcps is adaptable to any format of time series, its I/O module is designed specifically for photometry of the Kepler spacecraft. It extracts the pre-conditioned PDCSAP data from light curves files created by the standard Kepler pipeline. It can also handle csv-formatted ascii files. lcps uses a sliding window technique to compare a section of flux time series with its surroundings. A dip is detected if the flux within the window is lower than a threshold fraction of the surrounding fluxes.

  9. Exploring Windows Domain-Level Defenses Against Authentication Attacks

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Nichols, Jeff A.; Curtis, Laura

    2016-01-01

    We investigated the security resilience of the current Windows Active Directory (AD) environments to Pass-the-Hash and Pass- the-Ticket credential theft attacks. While doing this, we discovered a way to trigger the removal of all previously issued authentication credentials for a client, thus preventing their use by attackers. After triggered, the user is forced to contact the domain administrators and to authenticate to the AD to continue. This could become the basis for a response that arrests the spread of a detected attack. Operating in a virtualized XenServer environment, we were able to carefully determine and recreate the conditions necessary tomore » cause this response.« less

  10. VETA x ray data acquisition and control system

    NASA Technical Reports Server (NTRS)

    Brissenden, Roger J. V.; Jones, Mark T.; Ljungberg, Malin; Nguyen, Dan T.; Roll, John B., Jr.

    1992-01-01

    We describe the X-ray Data Acquisition and Control System (XDACS) used together with the X-ray Detection System (XDS) to characterize the X-ray image during testing of the AXAF P1/H1 mirror pair at the MSFC X-ray Calibration Facility. A variety of X-ray data were acquired, analyzed and archived during the testing including: mirror alignment, encircled energy, effective area, point spread function, system housekeeping and proportional counter window uniformity data. The system architecture is presented with emphasis placed on key features that include a layered UNIX tool approach, dedicated subsystem controllers, real-time X-window displays, flexibility in combining tools, network connectivity and system extensibility. The VETA test data archive is also described.

  11. Characterization of TimepixCam, a fast imager for the time-stamping of optical photons

    NASA Astrophysics Data System (ADS)

    Nomerotski, Andrei; Chakaberia, I.; Fisher-Levine, M.; Janoska, Z.; Takacs, P.; Tsang, T.

    2017-01-01

    We describe the characterization of TimepixCam, a novel camera used to time-stamp optical photons. The camera employs a specialized silicon sensor with a thin entrance window, read out by a Timepix ASIC. TimepixCam is able to record and time-stamp light flashes exceeding 1,000 photons with 15 ns time resolution. Specially produced photodiodes were used to evaluate the quantum efficiency, which was determined to be higher than 90% in the wavelength range of 430-900 nm. The quantum efficiency, sensitivity and ion detection efficiency were compared for a variety of sensors with different surface treatments. Sensors with the thinnest window, 50 nm, had the best performance.

  12. Early Warning for Large Magnitude Earthquakes: Is it feasible?

    NASA Astrophysics Data System (ADS)

    Zollo, A.; Colombelli, S.; Kanamori, H.

    2011-12-01

    The mega-thrust, Mw 9.0, 2011 Tohoku earthquake has re-opened the discussion among the scientific community about the effectiveness of Earthquake Early Warning (EEW) systems, when applied to such large events. Many EEW systems are now under-testing or -development worldwide and most of them are based on the real-time measurement of ground motion parameters in a few second window after the P-wave arrival. Currently, we are using the initial Peak Displacement (Pd), and the Predominant Period (τc), among other parameters, to rapidly estimate the earthquake magnitude and damage potential. A well known problem about the real-time estimation of the magnitude is the parameter saturation. Several authors have shown that the scaling laws between early warning parameters and magnitude are robust and effective up to magnitude 6.5-7; the correlation, however, has not yet been verified for larger events. The Tohoku earthquake occurred near the East coast of Honshu, Japan, on the subduction boundary between the Pacific and the Okhotsk plates. The high quality Kik- and K- networks provided a large quantity of strong motion records of the mainshock, with a wide azimuthal coverage both along the Japan coast and inland. More than 300 3-component accelerograms have been available, with an epicentral distance ranging from about 100 km up to more than 500 km. This earthquake thus presents an optimal case study for testing the physical bases of early warning and to investigate the feasibility of a real-time estimation of earthquake size and damage potential even for M > 7 earthquakes. In the present work we used the acceleration waveform data of the main shock for stations along the coast, up to 200 km epicentral distance. We measured the early warning parameters, Pd and τc, within different time windows, starting from 3 seconds, and expanding the testing time window up to 30 seconds. The aim is to verify the correlation of these parameters with Peak Ground Velocity and Magnitude, respectively, as a function of the length of the P-wave window. The entire rupture process of the Tohoku earthquake lasted more than 120 seconds, as shown by the source time functions obtained by several authors. When a 3 second window is used to measure Pd and τc the result is an obvious underestimation of the event size and final PGV. However, as the time window increases up to 27-30 seconds, the measured values of Pd and τc become comparable with those expected for a magnitude M≥8.5 earthquake, according to the τc vs. M and the PGV vs. Pd relationships obtained in a previous work. Since we did not observe any saturation effect for the predominant period and peak displacement measured within a P-wave, 30-seconds window, we infer that, at least from a theoretical point of view, the estimation of earthquake damage potential through the early warning parameters is still feasible for large events, provided that a longer time window is used for parameter measurement. The off-line analysis of the Tohoku event records shows that reliable estimations of the damage potential could have been obtained 40-50 seconds after the origin time, by updating the measurements of the early warning parameters in progressively enlarged P-wave time windows from 3 to 30 seconds.

  13. Optimization of energy window and evaluation of scatter compensation methods in MPS using the ideal observer with model mismatch

    NASA Astrophysics Data System (ADS)

    Ghaly, Michael; Links, Jonathan M.; Frey, Eric

    2015-03-01

    In this work, we used the ideal observer (IO) and IO with model mismatch (IO-MM) applied in the projection domain and an anthropomorphic Channelized Hotelling Observer (CHO) applied to reconstructed images to optimize the acquisition energy window width and evaluate various scatter compensation methods in the context of a myocardial perfusion SPECT defect detection task. The IO has perfect knowledge of the image formation process and thus reflects performance with perfect compensation for image-degrading factors. Thus, using the IO to optimize imaging systems could lead to suboptimal parameters compared to those optimized for humans interpreting SPECT images reconstructed with imperfect or no compensation. The IO-MM allows incorporating imperfect system models into the IO optimization process. We found that with near-perfect scatter compensation, the optimal energy window for the IO and CHO were similar; in its absence the IO-MM gave a better prediction of the optimal energy window for the CHO using different scatter compensation methods. These data suggest that the IO-MM may be useful for projection-domain optimization when model mismatch is significant, and that the IO is useful when followed by reconstruction with good models of the image formation process.

  14. Isolation of chicken embryonic stem cell and preparation of chicken chimeric model.

    PubMed

    Zhang, Yani; Yang, Haiyan; Zhang, Zhentao; Shi, Qingqing; Wang, Dan; Zheng, Mengmeng; Li, Bichun; Song, Jiuzhou

    2013-03-01

    Chicken embryonic stem cells (ESCs) were separated from blastoderms at stage-X and cultured in vitro. Alkaline phosphatase activity and stage-specific embryonic antigen-1 staining was conducted to detect ESCs. Then, chicken ESCs were transfected with linearized plasmid pEGFP-N1 in order to produce chimeric chicken. Firstly, the optimal electrotransfection condition was compared; the results showed the highest transfection efficiency was obtained when the field strength and pulse duration was 280 V and 75 μs, respectively. Secondly, the hatchability of shedding methods, drilling a window at the blunt end of egg and drilling a window at the lateral shell of egg was compared, the results showed that the hatchability was the highest for drilling a window at the lateral shell of egg. Thirdly, the hatchability of microinjection (ESCs was microinjected into chick embryo cavity) was compared too, the results showed there were significant difference between the injection group transfected with ESCs and that of other two groups. In addition, five chimeric chickens were obtained in this study and EGFP gene was expressed in some organs, but only two chimeric chicken expressed EGFP gene in the gonad, indicating that the chimeric chicken could be obtained through chick embryo cavity injection by drilling a window at the lateral shell of egg.

  15. Recent Results on "Approximations to Optimal Alarm Systems for Anomaly Detection"

    NASA Technical Reports Server (NTRS)

    Martin, Rodney Alexander

    2009-01-01

    An optimal alarm system and its approximations may use Kalman filtering for univariate linear dynamic systems driven by Gaussian noise to provide a layer of predictive capability. Predicted Kalman filter future process values and a fixed critical threshold can be used to construct a candidate level-crossing event over a predetermined prediction window. An optimal alarm system can be designed to elicit the fewest false alarms for a fixed detection probability in this particular scenario.

  16. Exploitation of the IMS and Other Data for a Comprehensive Advanced Analysis of the North Korean Nuclear Tests

    DTIC Science & Technology

    2010-02-01

    vertical component records in a six-second window starting near the Lg detection time. Because our signal measurements are taken from the broadband...from the 2009 test. That is, comparable Love waves may have been generated by the 2006 test, but not at detectable levels. Secondary tectonic...kt., respectively.  Relative yield estimates based on Lg observations from the two tests are generally consistent with the yield estimates obtained

  17. On the relationship between human search strategies, conspicuity, and search performance

    NASA Astrophysics Data System (ADS)

    Hogervorst, Maarten A.; Bijl, Piet; Toet, Alexander

    2005-05-01

    We determined the relationship between search performance with a limited field of view (FOV) and several scanning- and scene parameters in human observer experiments. The observers (38 trained army scouts) searched through a large search sector for a target (a camouflaged person) on a heath. From trial to trial the target appeared at a different location. With a joystick the observers scanned through a panoramic image (displayed on a PC-monitor) while the scan path was registered. Four conditions were run differing in sensor type (visual or thermal infrared) and window size (large or small). In conditions with a small window size the zoom option could be used. Detection performance was highly dependent on zoom factor and deteriorated when scan speed increased beyond a threshold value. Moreover, the distribution of scan speeds scales with the threshold speed. This indicates that the observers are aware of their limitations and choose a (near) optimal search strategy. We found no correlation between the fraction of detected targets and overall search time for the individual observers, indicating that both are independent measures of individual search performance. Search performance (fraction detected, total search time, time in view for detection) was found to be strongly related to target conspicuity. Moreover, we found the same relationship between search performance and conspicuity for visual and thermal targets. This indicates that search performance can be predicted directly by conspicuity regardless of the sensor type.

  18. Photoacoustic CO2 sensor system: design and potential for miniaturization and integration in silicon

    NASA Astrophysics Data System (ADS)

    Huber, J.; Wöllenstein, J.

    2015-05-01

    The detection of CO2 indoors has a large impact on today's sensor market. The ambient room climate is important for human health and wellbeing. The CO2 concentration is a main indicator for indoor climate and correlates with the number of persons inside a room. People in Europe spend more than 90% of their time indoors. This leads to a high demand for miniaturized and energy efficient CO2 sensors. To realize small and energy-efficient mass-market sensors, we develop novel miniaturized photoacoustic sensor systems with optimized design for real-time and selective CO2 detection. The sensor system consists of two chambers, a measurement and a detection chamber. The detection chamber consists of an integrated pressure sensor under special gas atmosphere. As pressure sensor we use a commercially available cell phone microphone. We describe a possible miniaturization process of the developed system by regarding the possibility of integration of all sensor parts. The system is manufactured in precision mechanics with IR-optical sapphire windows as optical connections. During the miniaturization process the sapphire windows are replaced by Si chips with a special IR anti-reflection coating. The developed system is characterized in detail with gas measurements and optical transmission investigations. The results of the characterization process offer a high potential for further miniaturization with high capability for mass market applications.

  19. Improved visualisation of early cerebral infarctions after endovascular stroke therapy using dual-energy computed tomography oedema maps.

    PubMed

    Grams, Astrid Ellen; Djurdjevic, Tanja; Rehwald, Rafael; Schiestl, Thomas; Dazinger, Florian; Steiger, Ruth; Knoflach, Michael; Gizewski, Elke Ruth; Glodny, Bernhard

    2018-05-04

    The aim was to investigate whether dual-energy computed tomography (DECT) reconstructions optimised for oedema visualisation (oedema map; EM) facilitate an improved detection of early infarctions after endovascular stroke therapy (EST). Forty-six patients (21 women; 25 men; mean age: 63 years; range 24-89 years) were included. The brain window (BW), virtual non-contrast (VNC) and modified VNC series based on a three-material decomposition technique optimised for oedema visualisation (EM) were evaluated. Follow-up imaging was used as the standard for comparison. Contralateral side to infarction differences in density (CIDs) were determined. Infarction detectability was assessed by two blinded readers, as well as image noise and contrast using Likert scales. ROC analyses were performed and the respective Youden indices calculated for cut-off analysis. The highest CIDs were found in the EM series (73.3 ± 49.3 HU), compared with the BW (-1.72 ± 13.29 HU) and the VNC (8.30 ± 4.74 HU) series. The EM was found to have the highest infarction detection rates (area under the curve: 0.97 vs. 0.54 and 0.90, p < 0.01) with a cut-off value of < 50.7 HU, despite slightly more pronounced image noise. The location of the infarction did not affect detectability (p > 0.05 each). The EM series allows higher contrast and better early infarction detection than the VNC or BW series after EST. • Dual-energy CT EM allows better early infarction detection than standard brain window. • Dual-energy CT EM series allow better early infarction detection than VNC series. • Dual-energy CT EM are modified VNC based on water content of tissue.

  20. 40 CFR 264.310 - Closure and post-closure care.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... settling, subsidence, erosion, or other events; (2) Continue to operate the leachate collection and removal system until leachate is no longer detected; (3) Maintain and monitor the leak detection system in...

  1. 40 CFR 264.310 - Closure and post-closure care.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... settling, subsidence, erosion, or other events; (2) Continue to operate the leachate collection and removal system until leachate is no longer detected; (3) Maintain and monitor the leak detection system in...

  2. 40 CFR 264.310 - Closure and post-closure care.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... settling, subsidence, erosion, or other events; (2) Continue to operate the leachate collection and removal system until leachate is no longer detected; (3) Maintain and monitor the leak detection system in...

  3. 40 CFR 264.310 - Closure and post-closure care.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... settling, subsidence, erosion, or other events; (2) Continue to operate the leachate collection and removal system until leachate is no longer detected; (3) Maintain and monitor the leak detection system in...

  4. 40 CFR 264.310 - Closure and post-closure care.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... settling, subsidence, erosion, or other events; (2) Continue to operate the leachate collection and removal system until leachate is no longer detected; (3) Maintain and monitor the leak detection system in...

  5. Review of correlation techniques

    NASA Technical Reports Server (NTRS)

    Bowhill, S. A.

    1983-01-01

    Correlation analysis in MST radar to determine the scattered power, Doppler frequency and correlation time for a noisy signal is examined. It is assumed that coherent detection was employed, with two accurately balanced quadrature receiving channels and that coherent integration is performed with a window length significantly less than the correlation time of the signal.

  6. The Moire Effect in Physics Teaching.

    ERIC Educational Resources Information Center

    Bernero, Bruce

    1989-01-01

    The Moire pattern is the shimmering pattern which looks like an odd interference pattern in window screens or folds of nylon shower curtain. Illustrates some of the ways the effect may be used, including demonstration of wave interference, detection of small displacement, persistence of vision, contour measurement, beats, and optical clearness.…

  7. The Spatially Resolved H(alpha)-Emitting Wind Structure of P Cygni

    DTIC Science & Technology

    2010-06-01

    using radio and optical interferometry, as well as direct imaging with adaptive optics (AO). Radio interferometric observations detect the nebula around...to structures in the nebula of P Cyg that are more than an order of magnitude smaller. Therefore, optical interferometry provides a unique window of

  8. Archean Isotope Anomalies as a Window into the Differentiation History of the Earth

    NASA Astrophysics Data System (ADS)

    Wainwright, A. N.; Debaille, V.; Zincone, S. A.

    2018-05-01

    No resolvable µ142Nd anomaly was detected in Paleo- Mesoarchean rocks of São Francisco and West African cratons. The lack of µ142Nd anomalies outside of North America and Greenland implies the Earth differentiated into at least two distinct domains.

  9. Electrophysiological and psychophysical asymmetries in sensitivity to interaural correlation gaps and implications for binaural integration time.

    PubMed

    Lüddemann, Helge; Kollmeier, Birger; Riedel, Helmut

    2016-02-01

    Brief deviations of interaural correlation (IAC) can provide valuable cues for detection, segregation and localization of acoustic signals. This study investigated the processing of such "binaural gaps" in continuously running noise (100-2000 Hz), in comparison to silent "monaural gaps", by measuring late auditory evoked potentials (LAEPs) and perceptual thresholds with novel, iteratively optimized stimuli. Mean perceptual binaural gap duration thresholds exhibited a major asymmetry: they were substantially shorter for uncorrelated gaps in correlated and anticorrelated reference noise (1.75 ms and 4.1 ms) than for correlated and anticorrelated gaps in uncorrelated reference noise (26.5 ms and 39.0 ms). The thresholds also showed a minor asymmetry: they were shorter in the positive than in the negative IAC range. The mean behavioral threshold for monaural gaps was 5.5 ms. For all five gap types, the amplitude of LAEP components N1 and P2 increased linearly with the logarithm of gap duration. While perceptual and electrophysiological thresholds matched for monaural gaps, LAEP thresholds were about twice as long as perceptual thresholds for uncorrelated gaps, but half as long for correlated and anticorrelated gaps. Nevertheless, LAEP thresholds showed the same asymmetries as perceptual thresholds. For gap durations below 30 ms, LAEPs were dominated by the processing of the leading edge of a gap. For longer gap durations, in contrast, both the leading and the lagging edge of a gap contributed to the evoked response. Formulae for the equivalent rectangular duration (ERD) of the binaural system's temporal window were derived for three common window shapes. The psychophysical ERD was 68 ms for diotic and about 40 ms for anti- and uncorrelated noise. After a nonlinear Z-transform of the stimulus IAC prior to temporal integration, ERDs were about 10 ms for reference correlations of ±1 and 80 ms for uncorrelated reference. Hence, a physiologically motivated peripheral nonlinearity changed the rank order of ERDs across experimental conditions in a plausible manner. Copyright © 2015 Elsevier B.V. All rights reserved.

  10. Development of an aerial counting system in oil palm plantations

    NASA Astrophysics Data System (ADS)

    Zulyma Miserque Castillo, Jhany; Laverde Diaz, Rubbermaid; Rueda Guzmán, Claudia Leonor

    2016-07-01

    This paper proposes the development of a counting aerial system capable of capturing, process and analyzing images of an oil palm plantation to register the number of cultivated palms. It begins with a study of the available UAV technologies to define the most appropriate model according to the project needs. As result, a DJI Phantom 2 Vision+ is used to capture pictures that are processed by a photogrammetry software to create orthomosaics from the areas of interest, which are handled by the developed software to calculate the number of palms contained in them. The implemented algorithm uses a sliding window technique in image pyramids to generate candidate windows, an LBP descriptor to model the texture of the picture, a logistic regression model to classify the windows and a non-maximum suppression algorithm to refine the decision. The system was tested in different images than the ones used for training and for establishing the set point. As result, the system showed a 95.34% detection rate with a 97.83% precision in mature palms and a 79.26% detection rate with a 97.53% precision in young palms giving an FI score of 0.97 for mature palms and 0.87 for the small ones. The results are satisfactory getting the census and high-quality images from which is possible to get more information from the area of interest. All this, achieved through a low-cost system capable of work even in cloudy conditions.

  11. CONSTRAINING POLARIZED FOREGROUNDS FOR EoR EXPERIMENTS. I. 2D POWER SPECTRA FROM THE PAPER-32 IMAGING ARRAY

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kohn, S. A.; Aguirre, J. E.; Moore, D. F.

    2016-06-01

    Current generation low-frequency interferometers constructed with the objective of detecting the high-redshift 21 cm background aim to generate power spectra of the brightness temperature contrast of neutral hydrogen in primordial intergalactic medium. Two-dimensional (2D) power spectra (power in Fourier modes parallel and perpendicular to the line of sight) that formed from interferometric visibilities have been shown to delineate a boundary between spectrally smooth foregrounds (known as the wedge ) and spectrally structured 21 cm background emission (the EoR window ). However, polarized foregrounds are known to possess spectral structure due to Faraday rotation, which can leak into the EoR window.more » In this work we create and analyze 2D power spectra from the PAPER-32 imaging array in Stokes I, Q, U, and V. These allow us to observe and diagnose systematic effects in our calibration at high signal-to-noise within the Fourier space most relevant to EoR experiments. We observe well-defined windows in the Stokes visibilities, with Stokes Q, U, and V power spectra sharing a similar wedge shape to that seen in Stokes I. With modest polarization calibration, we see no evidence that polarization calibration errors move power outside the wedge in any Stokes visibility to the noise levels attained. Deeper integrations will be required to confirm that this behavior persists to the depth required for EoR detection.« less

  12. Soft x-ray spectroscopy of high pressure liquid.

    PubMed

    Qiao, Ruimin; Xia, Yujian; Feng, Xuefei; Macdougall, James; Pepper, John; Armitage, Kevin; Borsos, Jason; Knauss, Kevin G; Lee, Namhey; Allézy, Arnaud; Gilbert, Benjamin; MacDowell, Alastair A; Liu, Yi-Sheng; Glans, Per-Anders; Sun, Xuhui; Chao, Weilun; Guo, Jinghua

    2018-01-01

    We describe a new experimental technique that allows for soft x-ray spectroscopy studies (∼100-1000 eV) of high pressure liquid (∼100 bars). We achieve this through a liquid cell with a 100 nm-thick Si 3 N 4 membrane window, which is sandwiched by two identical O-rings for vacuum sealing. The thin Si 3 N 4 membrane allows soft x-rays to penetrate, while separating the high-pressure liquid under investigation from the vacuum required for soft x-ray transmission and detection. The burst pressure of the Si 3 N 4 membrane increases with decreasing size and more specifically is inversely proportional to the side length of the square window. It also increases proportionally with the membrane thickness. Pressures > 60 bars could be achieved for 100 nm-thick square Si 3 N 4 windows that are smaller than 65 μm. However, above a certain pressure, the failure of the Si wafer becomes the limiting factor. The failure pressure of the Si wafer is sensitive to the wafer thickness. Moreover, the deformation of the Si 3 N 4 membrane is quantified using vertical scanning interferometry. As an example of the performance of the high-pressure liquid cell optimized for total-fluorescence detected soft x-ray absorption spectroscopy (sXAS), the sXAS spectra at the Ca L edge (∼350 eV) of a CaCl 2 aqueous solution are collected under different pressures up to 41 bars.

  13. Soft x-ray spectroscopy of high pressure liquid

    DOE PAGES

    Qiao, Ruimin; Xia, Yujian; Feng, Xuefei; ...

    2018-01-01

    Here, we describe a new experimental technique that allows for soft x-ray spectroscopy studies (~100-1000 eV) of high pressure liquid (~100 bars). We achieve this through a liquid cell with a 100 nm-thick Si 3N 4 membrane window, which is sandwiched by two identical O-rings for vacuum sealing. The thin Si 3N 4 membrane allows soft x-rays to penetrate, while separating the high-pressure liquid under investigation from the vacuum required for soft x-ray transmission and detection. The burst pressure of the Si 3N 4 membrane increases with decreasing size and more specifically is inversely proportional to the side length ofmore » the square window. It also increases proportionally with the membrane thickness. Pressures > 60 bars could be achieved for 100 nm-thick square Si 3N 4 windows that are smaller than 65 μm. However, above a certain pressure, the failure of the Si wafer becomes the limiting factor. The failure pressure of the Si wafer is sensitive to the wafer thickness. Moreover, the deformation of the Si 3N 4 membrane is quantified using vertical scanning interferometry. As an example of the performance of the high-pressure liquid cell optimized for total-fluorescence detected soft x-ray absorption spectroscopy (sXAS), the sXAS spectra at the Ca L edge (~350 eV) of a CaCl 2 aqueous solution are collected under different pressures up to 41 bars.« less

  14. Soft x-ray spectroscopy of high pressure liquid

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Qiao, Ruimin; Xia, Yujian; Feng, Xuefei

    Here, we describe a new experimental technique that allows for soft x-ray spectroscopy studies (~100-1000 eV) of high pressure liquid (~100 bars). We achieve this through a liquid cell with a 100 nm-thick Si 3N 4 membrane window, which is sandwiched by two identical O-rings for vacuum sealing. The thin Si 3N 4 membrane allows soft x-rays to penetrate, while separating the high-pressure liquid under investigation from the vacuum required for soft x-ray transmission and detection. The burst pressure of the Si 3N 4 membrane increases with decreasing size and more specifically is inversely proportional to the side length ofmore » the square window. It also increases proportionally with the membrane thickness. Pressures > 60 bars could be achieved for 100 nm-thick square Si 3N 4 windows that are smaller than 65 μm. However, above a certain pressure, the failure of the Si wafer becomes the limiting factor. The failure pressure of the Si wafer is sensitive to the wafer thickness. Moreover, the deformation of the Si 3N 4 membrane is quantified using vertical scanning interferometry. As an example of the performance of the high-pressure liquid cell optimized for total-fluorescence detected soft x-ray absorption spectroscopy (sXAS), the sXAS spectra at the Ca L edge (~350 eV) of a CaCl 2 aqueous solution are collected under different pressures up to 41 bars.« less

  15. Subsolid Lung Nodule Classification: A CT Criterion for Improving Interobserver Agreement.

    PubMed

    Revel, Marie-Pierre; Mannes, Inès; Benzakoun, Joseph; Guinet, Claude; Léger, Thomas; Grenier, Philippe; Lupo, Audrey; Fournel, Ludovic; Chassagnon, Guillaume; Bommart, Sébastien

    2018-01-01

    Purpose To evaluate an objective computed tomographic (CT) criterion for distinguishing between part-solid (PS) and nonsolid (NS) lung nodules. Materials and Methods This study received institutional review board approval, and patients gave informed consent. Preoperative CT studies in all patients who underwent surgery for subsolid nodules between 2008 and 2015 were first reviewed by two senior radiologists, who subjectively classified the nodules as PS or NS. A second reading performed 1 month later used predefined classification criteria and involved a third senior radiologist as well as three junior radiologists. Subsolid nodules were classified as PS if a solid portion was detectable in the mediastinal window setting (nonmeasurable, < 50%, or > 50% of the entire nodule) and were otherwise classified as NS (subclassified as pure or heterogeneous). Interreader agreement was assessed with κ statistics and the intraclass correlation coefficient (ICC). Results A total of 99 nodules measuring a median of 20 mm (range, 5-47 mm) in lung window CT images were analyzed. Senior radiologist agreement on the PS/NS distinction increased from moderate (κ = 0.54; 95% confidence interval [CI]: 0.37, 0.71) to excellent (κ = 0.89; 95% CI: 0.80, 0.98) between the first and second readings. At the second readings, agreement among senior and junior radiologists was excellent for PS/NS distinction (ICC = 0.87; 95% CI: 0.83, 0.90) and for subcategorization (ICC = 0.82; 95% CI: 0.77, 0.87). When a solid portion was measurable in the mediastinal window, the specificity for adenocarcinoma invasiveness ranged from 86% to 96%. Conclusion Detection of a solid portion in the mediastinal window setting allows subsolid nodules to be classified as PS with excellent interreader agreement. If the solid portion is measurable, the specificity for adenocarcinoma invasiveness is high. © RSNA, 2017 Online supplemental material is available for this article.

  16. Determination of Focal Mechanisms of Non-Volcanic Tremors Based on S-Wave Polarization Data Corrected for the Effects of Anisotropy

    NASA Astrophysics Data System (ADS)

    Imanishi, K.; Uchide, T.; Takeda, N.

    2014-12-01

    We propose a method to determine focal mechanisms of non-volcanic tremors (NVTs) based on S-wave polarization angles. The successful retrieval of polarization angles in low S/N tremor signals owes much to the observation that NVTs propagate slowly and therefore they do not change their location immediately. This feature of NVTs enables us to use a longer window to compute a polarization angle (e.g., one minute or longer), resulting in a stack of particle motions. Following Zhang and Schwartz (1994), we first correct for the splitting effect to recover the source polarization angle (anisotropy-corrected angle). This is a key step, because shear-wave splitting distorts the particle motion excited by a seismic source. We then determine the best double-couple solution using anisotropy-corrected angles of multiple stations. The present method was applied to a tremor sequence at Kii Peninsula, southwest Japan, which occurred at the beginning of April 2013. A standard splitting and polarization analysis were subject to a one-minute-long moving window to determine the splitting parameters as well as anisotropy-corrected angles. A grid search approach was performed at each hour to determine the best double-couple solution satisfying one-hour average polarization angles. Most solutions show NW-dipping low-angle planes consistent with the plate boundary or SE-dipping high-angle planes. Because of 180 degrees ambiguity in polarization angles, the present method alone cannot distinguish compressional quadrant from dilatational one. Together with the observation of very low-frequency earthquakes near the present study area (Ito et al., 2007), it is reasonable to consider that they represent shear slip on low-angle thrust faults. It is also noted that some of solutions contain strike-slip component. Acknowledgements: Seismograph stations used in this study include permanent stations operated by NIED (Hi-net), JMA, Earthquake Research Institute, together with Geological Survey of Japan, AIST. This work was supported by JSPS KAKENHI Grant Number 24540463.

  17. Contrasting effects of climate on juvenile body size in a Southern Hemisphere passerine bird.

    PubMed

    Kruuk, Loeske E B; Osmond, Helen L; Cockburn, Andrew

    2015-08-01

    Despite extensive research on the topic, it has been difficult to reach general conclusions as to the effects of climate change on morphology in wild animals: in particular, the effects of warming temperatures have been associated with increases, decreases or stasis in body size in different populations. Here, we use a fine-scale analysis of associations between weather and offspring body size in a long-term study of a wild passerine bird, the cooperatively breeding superb fairy-wren, in south-eastern Australia to show that such variation in the direction of associations occurs even within a population. Over the past 26 years, our study population has experienced increased temperatures, increased frequency of heatwaves and reduced rainfall - but the mean body mass of chicks has not changed. Despite the apparent stasis, mass was associated with weather across the previous year, but in multiple counteracting ways. Firstly, (i) chick mass was negatively associated with extremely recent heatwaves, but there also positive associations with (ii) higher maximum temperatures and (iii) higher rainfall, both occurring in a period prior to and during the nesting period, and finally (iv) a longer-term negative association with higher maximum temperatures following the previous breeding season. Our results illustrate how a morphological trait may be affected by both short- and long-term effects of the same weather variable at multiple times of the year and that these effects may act in different directions. We also show that climate within the relevant time windows may not be changing in the same way, such that overall long-term temporal trends in body size may be minimal. Such complexity means that analytical approaches that search for a single 'best' window for one particular weather variable may miss other relevant information, and is also likely to make analyses of phenotypic plasticity and prediction of longer-term population dynamics difficult. © 2015 John Wiley & Sons Ltd.

  18. The evaluation of the Hitomi (Astro-H)/SXS spare beryllium window in 3.8-30 keV

    NASA Astrophysics Data System (ADS)

    Hoshino, Akio; Yoshida, Yuki; Kitamoto, Shunji; Fujimoto, Ryuichi; Yamasaki, Noriko Y.; Ina, Toshiaki; Uruga, Tomoya; Eckart, Megan; Leutenegger, Maurice

    2017-08-01

    During the Hitomi (Astro-H) commissioning observations the SXS dewar gate valve (GV) remained closed to protect the instrument from initial spacecraft outgassing. As a result, the optical path of the observations included the Be window installed on the GV. Both x-ray fluorescence (XRF) analysis and x-ray transmission measurements were performed in June 2016 on the flight-spare Be window which is the same lot as the flight material at SPring-8 in Japan. The beamline operating range is 3.8 - 30 keV. We used a beam spot size of 1 mm × 0.2 mm to measure two positions on the Be window, at the center of the window and at one position 6.5 mm off-center. We used simultaneous transmission measurements of standard materials for energy calibration. The transmission data clearly showed Fe and Ni K-edges, plus a marginal detection of the Mn K-edge. We found that our transmission data was best fit using the following component Be: 261.86+/-0.01μm, Cr: 3nm (fixed), Mn: 3.81+/-0.05nm, Fe: 10.83+/-0.05nm, Ni: 16.48+/-0.03nm, Cu: 5nm (fixed). The transmission is reduced 1% at the Fe K-edge. The amount of contaminated materials are comparable to the values of the value provided by the vender. The surface transmission is strained with σ = 0.11% of the unbiased standard deviation calculated variation in the residuals between the measured value and the model.

  19. D Building FAÇADE Reconstruction Using Handheld Laser Scanning Data

    NASA Astrophysics Data System (ADS)

    Sadeghi, F.; Arefi, H.; Fallah, A.; Hahn, M.

    2015-12-01

    3D The three dimensional building modelling has been an interesting topic of research for decades and it seems that photogrammetry methods provide the only economic means to acquire truly 3D city data. According to the enormous developments of 3D building reconstruction with several applications such as navigation system, location based services and urban planning, the need to consider the semantic features (such as windows and doors) becomes more essential than ever, and therefore, a 3D model of buildings as block is not any more sufficient. To reconstruct the façade elements completely, we employed the high density point cloud data that obtained from the handheld laser scanner. The advantage of the handheld laser scanner with capability of direct acquisition of very dense 3D point clouds is that there is no need to derive three dimensional data from multi images using structure from motion techniques. This paper presents a grammar-based algorithm for façade reconstruction using handheld laser scanner data. The proposed method is a combination of bottom-up (data driven) and top-down (model driven) methods in which, at first the façade basic elements are extracted in a bottom-up way and then they are served as pre-knowledge for further processing to complete models especially in occluded and incomplete areas. The first step of data driven modelling is using the conditional RANSAC (RANdom SAmple Consensus) algorithm to detect façade plane in point cloud data and remove noisy objects like trees, pedestrians, traffic signs and poles. Then, the façade planes are divided into three depth layers to detect protrusion, indentation and wall points using density histogram. Due to an inappropriate reflection of laser beams from glasses, the windows appear like holes in point cloud data and therefore, can be distinguished and extracted easily from point cloud comparing to the other façade elements. Next step, is rasterizing the indentation layer that holds the windows and doors information. After rasterization process, the morphological operators are applied in order to remove small irrelevant objects. Next, the horizontal splitting lines are employed to determine floors and vertical splitting lines are employed to detect walls, windows, and doors. The windows, doors and walls elements which are named as terminals are clustered during classification process. Each terminal contains a special property as width. Among terminals, windows and doors are named the geometry tiles in definition of the vocabularies of grammar rules. Higher order structures that inferred by grouping the tiles resulted in the production rules. The rules with three dimensional modelled façade elements constitute formal grammar that is named façade grammar. This grammar holds all the information that is necessary to reconstruct façades in the style of the given building. Thus, it can be used to improve and complete façade reconstruction in areas with no or limited sensor data. Finally, a 3D reconstructed façade model is generated that the accuracy of its geometry size and geometry position depends on the density of the raw point cloud.

  20. Inlining 3d Reconstruction, Multi-Source Texture Mapping and Semantic Analysis Using Oblique Aerial Imagery

    NASA Astrophysics Data System (ADS)

    Frommholz, D.; Linkiewicz, M.; Poznanska, A. M.

    2016-06-01

    This paper proposes an in-line method for the simplified reconstruction of city buildings from nadir and oblique aerial images that at the same time are being used for multi-source texture mapping with minimal resampling. Further, the resulting unrectified texture atlases are analyzed for façade elements like windows to be reintegrated into the original 3D models. Tests on real-world data of Heligoland/ Germany comprising more than 800 buildings exposed a median positional deviation of 0.31 m at the façades compared to the cadastral map, a correctness of 67% for the detected windows and good visual quality when being rendered with GPU-based perspective correction. As part of the process building reconstruction takes the oriented input images and transforms them into dense point clouds by semi-global matching (SGM). The point sets undergo local RANSAC-based regression and topology analysis to detect adjacent planar surfaces and determine their semantics. Based on this information the roof, wall and ground surfaces found get intersected and limited in their extension to form a closed 3D building hull. For texture mapping the hull polygons are projected into each possible input bitmap to find suitable color sources regarding the coverage and resolution. Occlusions are detected by ray-casting a full-scale digital surface model (DSM) of the scene and stored in pixel-precise visibility maps. These maps are used to derive overlap statistics and radiometric adjustment coefficients to be applied when the visible image parts for each building polygon are being copied into a compact texture atlas without resampling whenever possible. The atlas bitmap is passed to a commercial object-based image analysis (OBIA) tool running a custom rule set to identify windows on the contained façade patches. Following multi-resolution segmentation and classification based on brightness and contrast differences potential window objects are evaluated against geometric constraints and conditionally grown, fused and filtered morphologically. The output polygons are vectorized and reintegrated into the previously reconstructed buildings by sparsely ray-tracing their vertices. Finally the enhanced 3D models get stored as textured geometry for visualization and semantically annotated "LOD-2.5" CityGML objects for GIS applications.

  1. Sink detection on tilted terrain for automated identification of glacial cirques

    NASA Astrophysics Data System (ADS)

    Prasicek, Günther; Robl, Jörg; Lang, Andreas

    2016-04-01

    Glacial cirques are morphologically distinct but complex landforms and represent a vital part of high mountain topography. Their distribution, elevation and relief are expected to hold information on (1) the extent of glacial occupation, (2) the mechanism of glacial cirque erosion, and (3) how glacial in concert with periglacial processes can limit peak altitude and mountain range height. While easily detectably for the expert's eye both in nature and on various representations of topography, their complicated nature makes them a nemesis for computer algorithms. Consequently, manual mapping of glacial cirques is commonplace in many mountain landscapes worldwide, but consistent datasets of cirque distribution and objectively mapped cirques and their morphometrical attributes are lacking. Among the biggest problems for algorithm development are the complexity in shape and the great variability of cirque size. For example, glacial cirques can be rather circular or longitudinal in extent, exist as individual and composite landforms, show prominent topographic depressions or can entirely be filled with water or sediment. For these reasons, attributes like circularity, size, drainage area and topology of landform elements (e.g. a flat floor surrounded by steep walls) have only a limited potential for automated cirque detection. Here we present a novel, geomorphometric method for automated identification of glacial cirques on digital elevation models that exploits their genetic bowl-like shape. First, we differentiate between glacial and fluvial terrain employing an algorithm based on a moving window approach and multi-scale curvature, which is also capable of fitting the analysis window to valley width. We then fit a plane to the valley stretch clipped by the analysis window and rotate the terrain around the center cell until the plane is level. Doing so, we produce sinks of considerable size if the clipped terrain represents a cirque, while no or only very small sinks develop on other valley stretches. We normalize sink area by window size for sink classification, apply this method to the Sawtooth Mountains, Idaho, and to Fiordland, New Zealand, and compare the results to manually mapped reference cirques. Results indicate that false negatives are produced only in very rugged terrain and false positives occur in rare cases, when valleys are strongly curved in longitudinal direction.

  2. Observations in the 1.3 and 1.5 THz atmospheric windows with the Receiver Lab Telescope

    NASA Technical Reports Server (NTRS)

    Marrone, Daniel P.; Blundell, Raymond; Tong, Edward; Paine, Scott N.; Loudkov, Denis; Kawamura, Jonathan H.; Luhr, Daniel; Barrientos, Claudio

    2005-01-01

    The Receiver Lab Telescope (RLT) is a ground-based terahertz telescope; it is currently the only instrument producing astronmical data between 1 and 2 THz. We report on our first measurements o the high CO transitions, which represent the highest frequency detection ever made from the ground. We also present initial observations of {N II} and discuss the implications of this non-detection for the standard estimates of the strength of this line.

  3. Particle components of dark matter

    PubMed Central

    Ellis, John

    1998-01-01

    Particle candidates for astrophysical dark matter are reviewed, with particular emphasis on the lightest supersymmetric particle and the axion. The former is now constrained by accelerator experiments to have a mass above about 40 GeV, and ongoing searches at accelerators, in space, and in underground experiments have a good chance to detect it. A reevaluation of the constraint on the axion from supernova 1987a leaves open an interesting window where it may be detected if it constitutes the galactic halo. PMID:9419324

  4. Material Limitations on the Detection Limit in Refractometry

    PubMed Central

    Skafte-Pedersen, Peder; Nunes, Pedro S.; Xiao, Sanshui; Mortensen, Niels Asger

    2009-01-01

    We discuss the detection limit for refractometric sensors relying on high-Q optical cavities and show that the ultimate classical detection limit is given by min {Δn} ≳ η, with n + iη being the complex refractive index of the material under refractometric investigation. Taking finite Q factors and filling fractions into account, the detection limit declines. As an example we discuss the fundamental limits of silicon-based high-Q resonators, such as photonic crystal resonators, for sensing in a bio-liquid environment, such as a water buffer. In the transparency window (λ ≳ 1100 nm) of silicon the detection limit becomes almost independent on the filling fraction, while in the visible, the detection limit depends strongly on the filling fraction because the silicon absorbs strongly. PMID:22291513

  5. Automatic Identification of Motion Artifacts in EHG Recording for Robust Analysis of Uterine Contractions

    PubMed Central

    Ye-Lin, Yiyao; Alberola-Rubio, José; Perales, Alfredo

    2014-01-01

    Electrohysterography (EHG) is a noninvasive technique for monitoring uterine electrical activity. However, the presence of artifacts in the EHG signal may give rise to erroneous interpretations and make it difficult to extract useful information from these recordings. The aim of this work was to develop an automatic system of segmenting EHG recordings that distinguishes between uterine contractions and artifacts. Firstly, the segmentation is performed using an algorithm that generates the TOCO-like signal derived from the EHG and detects windows with significant changes in amplitude. After that, these segments are classified in two groups: artifacted and nonartifacted signals. To develop a classifier, a total of eleven spectral, temporal, and nonlinear features were calculated from EHG signal windows from 12 women in the first stage of labor that had previously been classified by experts. The combination of characteristics that led to the highest degree of accuracy in detecting artifacts was then determined. The results showed that it is possible to obtain automatic detection of motion artifacts in segmented EHG recordings with a precision of 92.2% using only seven features. The proposed algorithm and classifier together compose a useful tool for analyzing EHG signals and would help to promote clinical applications of this technique. PMID:24523828

  6. Automatic identification of motion artifacts in EHG recording for robust analysis of uterine contractions.

    PubMed

    Ye-Lin, Yiyao; Garcia-Casado, Javier; Prats-Boluda, Gema; Alberola-Rubio, José; Perales, Alfredo

    2014-01-01

    Electrohysterography (EHG) is a noninvasive technique for monitoring uterine electrical activity. However, the presence of artifacts in the EHG signal may give rise to erroneous interpretations and make it difficult to extract useful information from these recordings. The aim of this work was to develop an automatic system of segmenting EHG recordings that distinguishes between uterine contractions and artifacts. Firstly, the segmentation is performed using an algorithm that generates the TOCO-like signal derived from the EHG and detects windows with significant changes in amplitude. After that, these segments are classified in two groups: artifacted and nonartifacted signals. To develop a classifier, a total of eleven spectral, temporal, and nonlinear features were calculated from EHG signal windows from 12 women in the first stage of labor that had previously been classified by experts. The combination of characteristics that led to the highest degree of accuracy in detecting artifacts was then determined. The results showed that it is possible to obtain automatic detection of motion artifacts in segmented EHG recordings with a precision of 92.2% using only seven features. The proposed algorithm and classifier together compose a useful tool for analyzing EHG signals and would help to promote clinical applications of this technique.

  7. Non-invasive detection of language-related prefrontal high gamma band activity with beamforming MEG.

    PubMed

    Hashimoto, Hiroaki; Hasegawa, Yuka; Araki, Toshihiko; Sugata, Hisato; Yanagisawa, Takufumi; Yorifuji, Shiro; Hirata, Masayuki

    2017-10-27

    High gamma band (>50 Hz) activity is a key oscillatory phenomenon of brain activation. However, there has not been a non-invasive method established to detect language-related high gamma band activity. We used a 160-channel whole-head magnetoencephalography (MEG) system equipped with superconducting quantum interference device (SQUID) gradiometers to non-invasively investigate neuromagnetic activities during silent reading and verb generation tasks in 15 healthy participants. Individual data were divided into alpha (8-13 Hz), beta (13-25 Hz), low gamma (25-50 Hz), and high gamma (50-100 Hz) bands and analysed with the beamformer method. The time window was consecutively moved. Group analysis was performed to delineate common areas of brain activation. In the verb generation task, transient power increases in the high gamma band appeared in the left middle frontal gyrus (MFG) at the 550-750 ms post-stimulus window. We set a virtual sensor on the left MFG for time-frequency analysis, and high gamma event-related synchronization (ERS) induced by a verb generation task was demonstrated at 650 ms. In contrast, ERS in the high gamma band was not detected in the silent reading task. Thus, our study successfully non-invasively measured language-related prefrontal high gamma band activity.

  8. Detection of apnea using a short-window FFT technique and an artificial neural network

    NASA Astrophysics Data System (ADS)

    Waldemark, Karina E.; Agehed, Kenneth I.; Lindblad, Thomas; Waldemark, Joakim T. A.

    1998-03-01

    Sleep apnea is characterized by frequent prolonged interruptions of breathing during sleep. This syndrome causes severe sleep disorders and is often responsible for development of other diseases such as heart problems, high blood pressure and daytime fatigue, etc. After diagnosis, sleep apnea is often successfully treated by applying positive air pressure (CPAP) to the mouth and nose. Although effective, the (CPAP) equipment takes up a lot of space and the connected mask causes a lot of inconvenience for the patients. This raised interest in developing new techniques for treatment of sleep apnea syndrome. Several studies have indicated that electrical stimulation of the hypoglossal nerve and muscle in the tongue may be a useful method for treating patients with severe sleep apnea. In order to be able to successfully prevent the occurrence of apnea it is necessary to have some technique for early and fast on-line detection or prediction of the apnea events. This paper suggests using measurements of respiratory airflow (mouth temperature). The signal processing for this task includes the use of a short window FFT technique and uses an artificial back propagation neural net to model or predict the occurrence of apneas. The results show that early detection of respiratory interruption is possible and that the delay time for this is small.

  9. Risperidone Effects on Brain Dynamic Connectivity-A Prospective Resting-State fMRI Study in Schizophrenia.

    PubMed

    Lottman, Kristin K; Kraguljac, Nina V; White, David M; Morgan, Charity J; Calhoun, Vince D; Butt, Allison; Lahti, Adrienne C

    2017-01-01

    Resting-state functional connectivity studies in schizophrenia evaluating average connectivity over the entire experiment have reported aberrant network integration, but findings are variable. Examining time-varying (dynamic) functional connectivity may help explain some inconsistencies. We assessed dynamic network connectivity using resting-state functional MRI in patients with schizophrenia, while unmedicated ( n  = 34), after 1 week ( n  = 29) and 6 weeks of treatment with risperidone ( n  = 24), as well as matched controls at baseline ( n  = 35) and after 6 weeks ( n  = 19). After identifying 41 independent components (ICs) comprising resting-state networks, sliding window analysis was performed on IC timecourses using an optimal window size validated with linear support vector machines. Windowed correlation matrices were then clustered into three discrete connectivity states (a relatively sparsely connected state, a relatively abundantly connected state, and an intermediately connected state). In unmedicated patients, static connectivity was increased between five pairs of ICs and decreased between two pairs of ICs when compared to controls, dynamic connectivity showed increased connectivity between the thalamus and somatomotor network in one of the three states. State statistics indicated that, in comparison to controls, unmedicated patients had shorter mean dwell times and fraction of time spent in the sparsely connected state, and longer dwell times and fraction of time spent in the intermediately connected state. Risperidone appeared to normalize mean dwell times after 6 weeks, but not fraction of time. Results suggest that static connectivity abnormalities in schizophrenia may partly be related to altered brain network temporal dynamics rather than consistent dysconnectivity within and between functional networks and demonstrate the importance of implementing complementary data analysis techniques.

  10. High-speed laser microsurgery of alert fruit flies for fluorescence imaging of neural activity

    PubMed Central

    Sinha, Supriyo; Liang, Liang; Ho, Eric T. W.; Urbanek, Karel E.; Luo, Liqun; Baer, Thomas M.; Schnitzer, Mark J.

    2013-01-01

    Intravital microscopy is a key means of monitoring cellular function in live organisms, but surgical preparation of a live animal for microscopy often is time-consuming, requires considerable skill, and limits experimental throughput. Here we introduce a spatially precise (<1-µm edge precision), high-speed (<1 s), largely automated, and economical protocol for microsurgical preparation of live animals for optical imaging. Using a 193-nm pulsed excimer laser and the fruit fly as a model, we created observation windows (12- to 350-µm diameters) in the exoskeleton. Through these windows we used two-photon microscopy to image odor-evoked Ca2+ signaling in projection neuron dendrites of the antennal lobe and Kenyon cells of the mushroom body. The impact of a laser-cut window on fly health appears to be substantially less than that of conventional manual dissection, for our imaging durations of up to 18 h were ∼5–20 times longer than prior in vivo microscopy studies of hand-dissected flies. This improvement will facilitate studies of numerous questions in neuroscience, such as those regarding neuronal plasticity or learning and memory. As a control, we used phototaxis as an exemplary complex behavior in flies and found that laser microsurgery is sufficiently gentle to leave it intact. To demonstrate that our techniques are applicable to other species, we created microsurgical openings in nematodes, ants, and the mouse cranium. In conjunction with emerging robotic methods for handling and mounting flies or other small organisms, our rapid, precisely controllable, and highly repeatable microsurgical techniques should enable automated, high-throughput preparation of live animals for optical experimentation. PMID:24167298

  11. Toward Rechargeable Persistent Luminescence for the First and Third Biological Windows via Persistent Energy Transfer and Electron Trap Redistribution.

    PubMed

    Xu, Jian; Murata, Daisuke; Ueda, Jumpei; Viana, Bruno; Tanabe, Setsuhisa

    2018-05-07

    Persistent luminescence (PersL) imaging without real-time external excitation has been regarded as the next generation of autofluorescence-free optical imaging technology. However, to achieve improved imaging resolution and deep tissue penetration, developing new near-infrared (NIR) persistent phosphors with intense and long duration PersL over 1000 nm is still a challenging but urgent task in this field. Herein, making use of the persistent energy transfer process from Cr 3+ to Er 3+ , we report a novel garnet persistent phosphor of Y 3 Al 2 Ga 3 O 12 codoped with Er 3+ and Cr 3+ (YAG G:Er-Cr), which shows intense Cr 3+ PersL (∼690 nm) in the deep red region matching well with the first biological window (NIR-I, 650-950 nm) and Er 3+ PersL (∼1532 nm) in the NIR region matching well with the third biological window (NIR-III, 1500-1800 nm). The optical imaging through raw-pork tissues (thickness of 1 cm) suggests that the emission band of Er 3+ can achieve higher spatial resolution and more accurate signal location than that of Cr 3+ due to the reduced light scattering at longer wavelengths. Furthermore, by utilizing two independent electron traps with two different trap depths in YAG G:Er-Cr, the Cr 3+ /Er 3+ PersL can even be recharged in situ by photostimulation with 660 nm LED thanks to the redistribution of trapped electrons from the deep trap to the shallow one. Our results serve as a guide in developing promising NIR (>1000 nm) persistent phosphors for long-term optical imaging.

  12. Robust video copy detection approach based on local tangent space alignment

    NASA Astrophysics Data System (ADS)

    Nie, Xiushan; Qiao, Qianping

    2012-04-01

    We propose a robust content-based video copy detection approach based on local tangent space alignment (LTSA), which is an efficient dimensionality reduction algorithm. The idea is motivated by the fact that the content of video becomes richer and the dimension of content becomes higher. It does not give natural tools for video analysis and understanding because of the high dimensionality. The proposed approach reduces the dimensionality of video content using LTSA, and then generates video fingerprints in low dimensional space for video copy detection. Furthermore, a dynamic sliding window is applied to fingerprint matching. Experimental results show that the video copy detection approach has good robustness and discrimination.

  13. Improvement of charge-pumping electrically detected magnetic resonance and its application to silicon metal-oxide-semiconductor field-effect transistor

    NASA Astrophysics Data System (ADS)

    Hori, Masahiro; Tsuchiya, Toshiaki; Ono, Yukinori

    2017-01-01

    Charge-pumping electrically detected magnetic resonance (CP EDMR), or EDMR in the CP mode, is improved and applied to a silicon metal-oxide-semiconductor field-effect transistor (MOSFET). Real-time monitoring of the CP process reveals that high-frequency transient currents are an obstacle to signal amplification for EDMR. Therefore, we introduce cutoff circuitry, leading to a detection limit for the number of spins as low as 103 for Si MOS interface defects. With this improved method, we demonstrate that CP EDMR inherits one of the most important features of the CP method: the gate control of the energy window of the detectable interface defects for spectroscopy.

  14. Dynamic triggering potential of large earthquakes recorded by the EarthScope U.S. Transportable Array using a frequency domain detection method

    NASA Astrophysics Data System (ADS)

    Linville, L. M.; Pankow, K. L.; Kilb, D. L.; Velasco, A. A.; Hayward, C.

    2013-12-01

    Because of the abundance of data from the Earthscope U.S. Transportable Array (TA), data paucity and station sampling bias in the US are no longer significant obstacles to understanding some of the physical parameters driving dynamic triggering. Initial efforts to determine locations of dynamic triggering in the US following large earthquakes (M ≥ 8.0) during TA relied on a time domain detection algorithm which used an optimized short-term average to long-term average (STA/LTA) filter and resulted in an unmanageably large number of false positive detections. Specific site sensitivities and characteristic noise when coupled with changes in detection rates often resulted in misleading output. To navigate this problem, we develop a frequency domain detection algorithm that first pre-whitens each seismogram and then computes a broadband frequency stack of the data using a three hour time window beginning at the origin time of the mainshock. This method is successful because of the broadband nature of earthquake signals compared with the more band-limited high frequency picks that clutter results from time domain picking algorithms. Preferential band filtering of the frequency stack for individual events can further increase the accuracy and drive the detection threshold to below magnitude one, but at general cost to detection levels across large scale data sets. Of the 15 mainshocks studied, 12 show evidence of discrete spatial clusters of local earthquake activity occurring within the array during the mainshock coda. Most of this activity is in the Western US with notable sequences in Northwest Wyoming, Western Texas, Southern New Mexico and Western Montana. Repeat stations (associated with 2 or more mainshocks) are generally rare, but when occur do so exclusively in California and Nevada. Notably, two of the most prolific regions of seismicity following a single mainshock occur following the 2009 magnitude 8.1 Samoa (Sep 29, 2009, 17:48:10) event, in areas with few or no known Quaternary faults and sparse historic seismicity. To gain a better understanding of the potential interaction between local events during the mainshock coda and the local stress changes induced by the passing surface waves, we juxtapose the local earthquake locations on maps of peak stress changes (e.g., radial, tangential and horizontal). Preliminary results reveal that triggering in the US is perhaps not as common as previously thought, and that dynamic triggering is most likely a more complicated interplay between physical parameters (e.g., amplitude threshold, wave orientation, tectonic environment, etc) than can be explained by a single dominant driver.

  15. Brief ultrasonication improves detection of biofilm-formative bacteria around a metal implant.

    PubMed

    Kobayashi, Naomi; Bauer, Thomas W; Tuohy, Marion J; Fujishiro, Takaaki; Procop, Gary W

    2007-04-01

    Biofilms are complex microenvironments produced by microorganisms on surfaces. Ultrasonication disrupts biofilms and may make the microorganism or its DNA available for detection. We determined whether ultrasonication could affect our ability to detect bacteria adherent to a metal substrate. A biofilm-formative Staphylococcus aureus strain was used for an in vitro implant infection model (biofilm-formative condition). We used quantitative culture and real time-polymerase chain reaction to determine the influence of different durations of ultrasound on bacterial adherence and viability. Sonication for 1 minute increased the yield of bacteria. Sonication longer than 5 minutes led to fewer bacterial colonies by conventional culture but not by polymerase chain reaction. This suggests short periods of sonication help release bacteria from the metal substrate by disrupting the biofilm, but longer periods of sonication lyse bacteria prohibiting their detection in microbiologic cultures. A relatively short duration of sonication may be desirable for maximizing detection of biofilm-formative bacteria around implants by culture or polymerase chain reaction.

  16. A Spitzer search for transits of radial velocity detected super-Earths

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kammer, J. A.; Knutson, H. A.; Desert, J.-M.

    2014-02-01

    Unlike hot Jupiters or other gas giants, super-Earths are expected to have a wide variety of compositions, ranging from terrestrial bodies like our own to more gaseous planets like Neptune. Observations of transiting systems, which allow us to directly measure planet masses and radii and constrain atmospheric properties, are key to understanding the compositional diversity of the planets in this mass range. Although Kepler has discovered hundreds of transiting super-Earth candidates over the past 4 yr, the majority of these planets orbit stars that are too far away and too faint to allow for detailed atmospheric characterization and reliable massmore » estimates. Ground-based transit surveys focus on much brighter stars, but most lack the sensitivity to detect planets in this size range. One way to get around the difficulty of finding these smaller planets in transit is to start by choosing targets that are already known to host super-Earth sized bodies detected using the radial velocity (RV) technique. Here we present results from a Spitzer program to observe six of the most favorable RV-detected super-Earth systems, including HD 1461, HD 7924, HD 156668, HIP 57274, and GJ 876. We find no evidence for transits in any of their 4.5 μm flux light curves, and place limits on the allowed transit depths and corresponding planet radii that rule out even the most dense and iron-rich compositions for these objects. We also observed HD 97658, but the observation window was based on a possible ground-based transit detection that was later ruled out; thus the window did not include the predicted time for the transit detection recently made by the Microvariability and Oscillations of Stars space telescope.« less

  17. Genome-Wide Association Study for Identifying Loci that Affect Fillet Yield, Carcass, and Body Weight Traits in Rainbow Trout (Oncorhynchus mykiss).

    PubMed

    Gonzalez-Pena, Dianelys; Gao, Guangtu; Baranski, Matthew; Moen, Thomas; Cleveland, Beth M; Kenney, P Brett; Vallejo, Roger L; Palti, Yniv; Leeds, Timothy D

    2016-01-01

    Fillet yield (FY, %) is an economically-important trait in rainbow trout aquaculture that affects production efficiency. Despite that, FY has received little attention in breeding programs because it is difficult to measure on a large number of fish and cannot be directly measured on breeding candidates. The recent development of a high-density SNP array for rainbow trout has provided the needed tool for studying the underlying genetic architecture of this trait. A genome-wide association study (GWAS) was conducted for FY, body weight at 10 (BW10) and 13 (BW13) months post-hatching, head-off carcass weight (CAR), and fillet weight (FW) in a pedigreed rainbow trout population selectively bred for improved growth performance. The GWAS analysis was performed using the weighted single-step GBLUP method (wssGWAS). Phenotypic records of 1447 fish (1.5 kg at harvest) from 299 full-sib families in three successive generations, of which 875 fish from 196 full-sib families were genotyped, were used in the GWAS analysis. A total of 38,107 polymorphic SNPs were analyzed in a univariate model with hatch year and harvest group as fixed effects, harvest weight as a continuous covariate, and animal and common environment as random effects. A new linkage map was developed to create windows of 20 adjacent SNPs for use in the GWAS. The two windows with largest effect for FY and FW were located on chromosome Omy9 and explained only 1.0-1.5% of genetic variance, thus suggesting a polygenic architecture affected by multiple loci with small effects in this population. One window on Omy5 explained 1.4 and 1.0% of the genetic variance for BW10 and BW13, respectively. Three windows located on Omy27, Omy17, and Omy9 (same window detected for FY) explained 1.7, 1.7, and 1.0%, respectively, of genetic variance for CAR. Among the detected 100 SNPs, 55% were located directly in genes (intron and exons). Nucleotide sequences of intragenic SNPs were blasted to the Mus musculus genome to create a putative gene network. The network suggests that differences in the ability to maintain a proliferative and renewable population of myogenic precursor cells may affect variation in growth and fillet yield in rainbow trout.

  18. Genome-Wide Association Study for Identifying Loci that Affect Fillet Yield, Carcass, and Body Weight Traits in Rainbow Trout (Oncorhynchus mykiss)

    PubMed Central

    Gonzalez-Pena, Dianelys; Gao, Guangtu; Baranski, Matthew; Moen, Thomas; Cleveland, Beth M.; Kenney, P. Brett; Vallejo, Roger L.; Palti, Yniv; Leeds, Timothy D.

    2016-01-01

    Fillet yield (FY, %) is an economically-important trait in rainbow trout aquaculture that affects production efficiency. Despite that, FY has received little attention in breeding programs because it is difficult to measure on a large number of fish and cannot be directly measured on breeding candidates. The recent development of a high-density SNP array for rainbow trout has provided the needed tool for studying the underlying genetic architecture of this trait. A genome-wide association study (GWAS) was conducted for FY, body weight at 10 (BW10) and 13 (BW13) months post-hatching, head-off carcass weight (CAR), and fillet weight (FW) in a pedigreed rainbow trout population selectively bred for improved growth performance. The GWAS analysis was performed using the weighted single-step GBLUP method (wssGWAS). Phenotypic records of 1447 fish (1.5 kg at harvest) from 299 full-sib families in three successive generations, of which 875 fish from 196 full-sib families were genotyped, were used in the GWAS analysis. A total of 38,107 polymorphic SNPs were analyzed in a univariate model with hatch year and harvest group as fixed effects, harvest weight as a continuous covariate, and animal and common environment as random effects. A new linkage map was developed to create windows of 20 adjacent SNPs for use in the GWAS. The two windows with largest effect for FY and FW were located on chromosome Omy9 and explained only 1.0–1.5% of genetic variance, thus suggesting a polygenic architecture affected by multiple loci with small effects in this population. One window on Omy5 explained 1.4 and 1.0% of the genetic variance for BW10 and BW13, respectively. Three windows located on Omy27, Omy17, and Omy9 (same window detected for FY) explained 1.7, 1.7, and 1.0%, respectively, of genetic variance for CAR. Among the detected 100 SNPs, 55% were located directly in genes (intron and exons). Nucleotide sequences of intragenic SNPs were blasted to the Mus musculus genome to create a putative gene network. The network suggests that differences in the ability to maintain a proliferative and renewable population of myogenic precursor cells may affect variation in growth and fillet yield in rainbow trout. PMID:27920797

  19. Detecting and identifying DNA via the THz backbone frequency using a metamaterial-based label-free biosensor

    NASA Astrophysics Data System (ADS)

    Mirzaei, Sahar; Green, Nicolas G.; Rotaru, Mihai; Pu, Suan Hui

    2017-02-01

    In genetic diagnostics, laboratory-based equipment generally uses analytical techniques requiring complicated and expensive fluorescent labelling of target DNA molecules. Intense research effort into, and commercial development of, Point-of-Care diagnostics and Personalized Healthcare are driving the development of simple, fast and cost-effective detection methods. One potential label-free DNA detection method uses Terahertz (THz) spectroscopy of the natural responses of DNA in metamaterial structures, which are engineered to have properties that are impossible to obtain in natural materials. This paper presents a study of the development of metamaterials based on asymmetric X-shaped resonator inclusions as a functional sensor for DNA. Gold X-shaped resonator structures with dimensions of 90/85 μm were demonstrated to produce trapped mode resonant frequency in the correct range for DNA detection. Realistic substrate materials in the form of 375 μm thick quartz were investigated, demonstrating that the non-transparent nature of the material resulted in the production of standing waves, affecting the system response, as well as requiring a reduction in scale of the resonator of 85%. As a result, the effect of introducing etched windows in the substrate material were investigated, demonstrating that increased window size significantly reduces the effect of the substrate on the system response. The device design showed a good selectivity when RNA samples were introduced to the model, demonstrating the potential for this design of device in the development of sensors capable of performing cheap and simple genetic analysis of DNA, giving label-free detection at high sensitivity.

  20. Quasi-Elastic Light Scattering in Ophthalmology

    NASA Astrophysics Data System (ADS)

    Ansari, Rafat R.

    The eye is not just a "window to the soul"; it can also be a "window to the human body." The eye is built like a camera. Light which travels from the cornea to the retina traverses through tissues that are representative of nearly every tissue type and fluid type in the human body. Therefore, it is possible to diagnose ocular and systemic diseases through the eye. Quasi-elastic light scattering (QELS) also known as dynamic light scattering (DLS) is a laboratory technique routinely used in the characterization of macromolecular dispersions. QELS instrumentation has now become more compact, sensitive, flexible, and easy to use. These developments have made QELS/DLS an important tool in ophthalmic research where disease can be detected early and noninvasively before the clinical symptoms appear.

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