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Sample records for main sequence mass

  1. Reevaluating the Mass-Radius Relation for Low-mass, Main-sequence Stars

    NASA Astrophysics Data System (ADS)

    Feiden, Gregory A.; Chaboyer, Brian

    2012-09-01

    We examine the agreement between the observed and theoretical low-mass (<0.8 M ⊙) stellar main-sequence mass-radius relationship by comparing detached eclipsing binary (DEB) data with a new, large grid of stellar evolution models. The new grid allows for a realistic variation in the age and metallicity of the DEB population, characteristic of the local galactic neighborhood. Overall, our models do a reasonable job of reproducing the observational data. A large majority of the models match the observed stellar radii to within 4%, with a mean absolute error of 2.3%. These results represent a factor of two improvement compared to previous examinations of the low-mass mass-radius relationship. The improved agreement between models and observations brings the radius deviations within the limits imposed by potential starspot-related uncertainties for 92% of the stars in our DEB sample.

  2. Dust discs around low-mass main-sequence stars

    NASA Technical Reports Server (NTRS)

    Wolstencroft, R. D.; Walker, Helen J.

    1988-01-01

    The current understanding of the formation of circumstellar disks as a natural accompaniment to the process of low-mass star formation is examined. Models of the thermal emission from the dust disks around the prototype stars Alpha Lyr, Alpha PsA, Beta Pic, and Epsilon Eri are discussed, which indicate that the central regions of three of these disks are almost devoid of dust within radii ranging between 17 and 26 AU, with the temperature of the hottest zone lying between about 115 and 210 K. One possible explanation of the dust-free zones is the presence of a planet at the inner boundary of each cloud which sweeps up grains crossing its orbit.

  3. Pre-main Sequence Evolution and the Hydrogen-Burning Minimum Mass

    NASA Astrophysics Data System (ADS)

    Nakano, Takenori

    There is a lower limit to the mass of the main-sequence stars (the hydrogen-burning minimum mass) below which the stars cannot replenish the energy lost from their surfaces with the energy released by the hydrogen burning in their cores. This is caused by the electron degeneracy in the stars which suppresses the increase of the central temperature with contraction. To find out the lower limit we need the accurate knowledge of the pre-main sequence evolution of very low-mass stars in which the effect of electron degeneracy is important. We review how Hayashi and Nakano (1963) carried out the first determination of this limit.

  4. Effects of Main-Sequence Mass Loss on Stellar and Galactic Chemical Evolution.

    NASA Astrophysics Data System (ADS)

    Guzik, Joyce Ann

    1988-06-01

    L. A. Willson, G. H. Bowen and C. Struck -Marcell have proposed that 1 to 3 solar mass stars may experience evolutionarily significant mass loss during the early part of their main-sequence phase. The suggested mass-loss mechanism is pulsation, facilitated by rapid rotation. Initial mass-loss rates may be as large as several times 10^{-9}M o/yr, diminishing over several times 10^8 years. We attempted to test this hypothesis by comparing some theoretical implications with observations. Three areas are addressed: Solar models, cluster HR diagrams, and galactic chemical evolution. Mass-losing solar models were evolved that match the Sun's luminosity and radius at its present age. The most extreme viable models have initial mass 2.0 M o, and mass-loss rates decreasing exponentially over 2-3 times 10^8 years. Compared to a constant -mass model, these models require a reduced initial ^4He abundance, have deeper envelope convection zones and higher ^8B neutrino fluxes. Early processing of present surface layers at higher interior temperatures increases the surface ^3He abundance, destroys Li, Be and B, and decreases the surface C/N ratio following first dredge-up. Evolution calculations incorporating main-sequence mass loss were completed for a grid of models with initial masses 1.25 to 2.0 Mo and mass loss timescales 0.2 to 2.0 Gyr. Cluster HR diagrams synthesized with these models confirm the potential for the hypothesis to explain observed spreads or bifurcations in the upper main sequence, blue stragglers, anomalous giants, and poor fits of main-sequence turnoffs by standard isochrones. Simple closed galactic chemical evolution models were used to test the effects of main-sequence mass loss on the F and G dwarf distribution. Stars between 3.0 M o and a metallicity -dependent lower mass are assumed to lose mass. The models produce a 30 to 60% increase in the stars to stars-plus -remnants ratio, with fewer early-F dwarfs and many more late-F dwarfs remaining on the main

  5. The V-band Empirical Mass-luminosity Relation for Main Sequence Stars

    NASA Astrophysics Data System (ADS)

    Xia, Fang; Fu, Yan-Ning

    2010-07-01

    Stellar mass is an indispensable parameter in the studies of stellar physics and stellar dynamics. On the one hand, the most reliable way to determine the stellar dynamical mass is via orbital determinations of binaries. On the other hand, however, most stellar masses have to be estimated by using the mass luminosity relation (MLR). Therefore, it is important to obtain the empirical MLR through fitting the data of stellar dynamical mass and luminosity. The effect of metallicity can make this relation disperse in the V-band, but studies show that this is mainly limited to the case when the stellar mass is less than 0.6M⊙ Recently, many relevant data have been accumulated for main sequence stars with larger masses, which make it possible to significantly improve the corresponding MLR. Using a fitting method which can reasonably assign weights to the observational data including two quantities with different dimensions, we obtain a V-band MLR based on the dynamical masses and luminosities of 203 main sequence stars. In comparison with the previous work, the improved MLR is statistically significant, and the relative error of mass estimation reaches about 5%. Therefore, our MLR is useful not only in the studies of statistical nature, but also in the studies of concrete stellar systems, such as the long-term dynamical study and the short-term positioning study of a specific multiple star system.

  6. The V Band Empirical Mass-Luminosity Relation for Main Sequence Stars

    NASA Astrophysics Data System (ADS)

    Xia, F.; Fu, Y. N.

    2010-01-01

    Stellar mass is an indispensable parameter in the studies of stellar physics and stellar dynamics. On the one hand, the most reliable way to determine the stellar dynamical mass is via orbital determination of binaries. On the other hand, however, most stellar masses have to be estimated by using the mass-luminosity relation (MLR). Therefore, it is important to obtain the empirical MLR through fitting the data of stellar dynamical mass and luminosity. The effect of metallicity can make this relation disperse in the V-band, but studies show that this is mainly limited to the case when the stellar mass is less than 0.6M⊙. Recently, many relevant data have been accumulated for main sequence stars with larger mass, which make it possible to significantly improve the corresponding MLR. Using a fitting method which can reasonably assign weight to the observational data including two quantities with different dimensions, we obtain a V-band MLR based on the dynamical masses and luminosities of 203 main sequence stars. Compared with the previous work, the improved MLR is statistically significant, and the relative error of mass estimation reaches about 5%. Therefore, our MLR is useful not only in studies of statistical nature, but also in studies of concrete stellar systems, such as the long-term dynamical study and the short-term positioning study of a specific multiple star system.

  7. Reconciling mass functions with the star-forming main sequence via mergers

    NASA Astrophysics Data System (ADS)

    Steinhardt, Charles L.; Yurk, Dominic; Capak, Peter

    2017-06-01

    We combine star formation along the 'main sequence', quiescence and clustering and merging to produce an empirical model for the evolution of individual galaxies. Main-sequence star formation alone would significantly steepen the stellar mass function towards low redshift, in sharp conflict with observation. However, a combination of star formation and merging produces a consistent result for correct choice of the merger rate function. As a result, we are motivated to propose a model in which hierarchical merging is disconnected from environmentally independent star formation. This model can be tested via correlation functions and would produce new constraints on clustering and merging.

  8. BEYOND THE MAIN SEQUENCE: TESTING THE ACCURACY OF STELLAR MASSES PREDICTED BY THE PARSEC EVOLUTIONARY TRACKS

    SciTech Connect

    Ghezzi, Luan; Johnson, John Asher, E-mail: lghezzi@cfa.harvard.edu

    2015-10-20

    Characterizing the physical properties of exoplanets and understanding their formation and orbital evolution requires precise and accurate knowledge of their host stars. Accurately measuring stellar masses is particularly important because they likely influence planet occurrence and the architectures of planetary systems. Single main-sequence stars typically have masses estimated from evolutionary tracks, which generally provide accurate results due to their extensive empirical calibration. However, the validity of this method for subgiants and giants has been called into question by recent studies, with suggestions that the masses of these evolved stars could have been overestimated. We investigate these concerns using a samplemore » of 59 benchmark evolved stars with model-independent masses (from binary systems or asteroseismology) obtained from the literature. We find very good agreement between these benchmark masses and the ones estimated using evolutionary tracks. The average fractional difference in the mass interval ∼0.7–4.5 M{sub ⊙} is consistent with zero (−1.30 ± 2.42%), with no significant trends in the residuals relative to the input parameters. A good agreement between model-dependent and -independent radii (−4.81 ± 1.32%) and surface gravities (0.71 ± 0.51%) is also found. The consistency between independently determined ages for members of binary systems adds further support for the accuracy of the method employed to derive the stellar masses. Taken together, our results indicate that determination of masses of evolved stars using grids of evolutionary tracks is not significantly affected by systematic errors, and is thus valid for estimating the masses of isolated stars beyond the main sequence.« less

  9. The Role Of Rejuvenation In Shaping The High-Mass End Of The Main Sequence

    NASA Astrophysics Data System (ADS)

    Mancini, Chiara

    2017-06-01

    We investigate the nature of star forming galaxies with reduced specific SFRs and high stellar masses, those that seemingly cause the so-called bending of the main sequence. The fact that such objects host large bulges recently lead some to suggest that the internal formation of the bulges, via compaction or disk instabilities, was the late event that induced sSFRs of massive galaxies to drop in a slow downfall and thus the main sequence to bend. We have studied in detail a sample of 16 galaxies at 0.5main sequence' are virtually all maximally old, with ages approaching the age of the Universe at the time of observation, while disks are very young (t50 1-2 Gyr). We conclude that the bending of the main sequence is likely due to rejuvenation, disfavouring mechanisms that postulate the internal formation of bulges at late times.

  10. The effect of starspots on the radii of low-mass pre-main-sequence stars

    NASA Astrophysics Data System (ADS)

    Jackson, R. J.; Jeffries, R. D.

    2014-07-01

    A polytropic model is used to investigate the effects of dark photospheric spots on the evolution and radii of magnetically active, low-mass (M < 0.5 M⊙), pre-main-sequence (PMS) stars. Spots slow the contraction along Hayashi tracks and inflate the radii of PMS stars by a factor of (1 - β)-N compared to unspotted stars of the same luminosity, where β is the equivalent covering fraction of dark starspots and N ≃ 0.45 ± 0.05. This is a much stronger inflation than predicted by Spruit & Weiss for main-sequence stars with the same β, where N ˜ 0.2-0.3. These models have been compared to radii determined for very magnetically active K- and M-dwarfs in the young Pleiades and NGC 2516 clusters, and the radii of tidally locked, low-mass eclipsing binary components. The binary components and zero-age main-sequence K-dwarfs have radii inflated by ˜10 per cent compared to an empirical radius-luminosity relation that is defined by magnetically inactive field dwarfs with interferometrically measured radii; low-mass M-type PMS stars, that are still on their Hayashi tracks, are inflated by up to ˜40 per cent. If this were attributable to starspots alone, we estimate that an effective spot coverage of 0.35 < β < 0.51 is required. Alternatively, global inhibition of convective flux transport by dynamo-generated fields may play a role. However, we find greater consistency with the starspot models when comparing the loci of active young stars and inactive field stars in colour-magnitude diagrams, particularly for the highly inflated PMS stars, where the large, uniform temperature reduction required in globally inhibited convection models would cause the stars to be much redder than observed.

  11. Mass functions for globular cluster main sequences based on CCD photometry and stellar models

    NASA Astrophysics Data System (ADS)

    McClure, Robert D.; Vandenberg, Don A.; Smith, Graeme H.; Fahlman, Gregory G.; Richer, Harvey B.; Hesser, James E.; Harris, William E.; Stetson, Peter B.; Bell, R. A.

    1986-08-01

    Main-sequence luminosity functions constructed from CCD observations of globular clusters reveal a strong trend in slope with metal abundance. Theoretical luminosity functions constructed from VandenBerg and Bell's (1985) isochrones have been fitted to the observations and reveal a trend between x, the power-law index of the mass function, and metal abundance. The most metal-poor clusters require an index of about x = 2.5, whereas the most metal-rich clusters exhibit an index of x of roughly -0.5. The luminosity functions for two sparse clusters, E3 and Pal 5, are distinct from those of the more massive clusters, in that they show a turndown which is possibly a result of mass loss or tidal disruption.

  12. Characterizing Intermediate-Mass, Pre-Main-Sequence Stars via X-Ray Emision

    NASA Astrophysics Data System (ADS)

    Haze Nunez, Evan; Povich, Matthew Samuel; Binder, Breanna Arlene; Broos, Patrick; Townsley, Leisa K.

    2018-01-01

    The X-ray emission from intermediate-mass, pre-main-sequence stars (IMPS) can provide useful constraints on the ages of very young (${<}5$~Myr) massive star forming regions. IMPS have masses between 2 and 8 $M_{\\odot}$ and are getting power from the gravitational contraction of the star. Main-sequence late-B and A-type stars are not expected to be strong X-ray emitters, because they lack the both strong winds of more massive stars and the magneto-coronal activity of lower-mass stars. There is, however, mounting evidence that IMPS are powerful intrinsic x-ray emitters during their convection-dominated early evolution, before the development and rapid growth of a radiation zone. We present our prime candidates for intrinsic, coronal X-ray emission from IMPS identified in the Chandra Carina Complex Project. The Carina massive star-forming complex is of special interest due to the wide variation of star formation stages within the region. Candidate IMPS were identified using infrared spectral energy distribution (SED) models. X-ray properties, including thermal plasma temperatures and absorption-corrected fluxes, were derived from XSPEC fits performed using absorption ($N_{H}$) constrained by the extinction values returned by the infrared SED fits. We find that IMPS have systematically higher X-ray luminosities compared to their lower-mass cousins, the TTauri stars.This work is supported by the National Science Foundation under grant CAREER-1454334 and by NASA through Chandra Award 18200040.

  13. Hot subdwarfs in (eclipsing) binaries with brown dwarf or low-mass main-sequence companions

    NASA Astrophysics Data System (ADS)

    Schaffenroth, Veronika; Geier, Stephan; Heber, Uli

    2014-09-01

    The formation of hot subdwarf stars (sdBs), which are core helium-burning stars located on the extended horizontal branch, is not yet understood. Many of the known hot subdwarf stars reside in close binary systems with short orbital periods of between a few hours and a few days, with either M-star or white-dwarf companions. Common-envelope ejection is the most probable formation channel. Among these, eclipsing systems are of special importance because it is possible to constrain the parameters of both components tightly by combining spectroscopic and light-curve analyses. They are called HW Virginis systems. Soker (1998) proposed that planetary or brown-dwarf companions could cause the mass loss necessary to form an sdB. Substellar objects with masses greater than >10 M_J were predicted to survive the common-envelope phase and end up in a close orbit around the stellar remnant, while planets with lower masses would entirely evaporate. This raises the question if planets can affect stellar evolution. Here we report on newly discovered eclipsing or not eclipsing hot subdwarf binaries with brown-dwarf or low-mass main-sequence companions and their spectral and photometric analysis to determine the fundamental parameters of both components.

  14. The discovery of low-mass pre-main-sequence stars in Cepheus OB3b

    NASA Astrophysics Data System (ADS)

    Pozzo, M.; Naylor, T.; Jeffries, R. D.; Drew, J. E.

    2003-05-01

    We report the discovery of a low-mass pre-main-sequence (PMS) stellar population in the younger subgroup of the Cepheus OB3 association, Cep OB3b, using UBVI CCD photometry and follow-up spectroscopy. The optical survey covers approximately 1300 arcmin2 on the sky and gives a global photometric and astrometric catalogue for more than 7000 objects. The location of a PMS population is well defined in a V versus (V-I) colour-magnitude diagram. Multifibre spectroscopic results for optically selected PMS candidates confirm the T Tauri nature for 10 objects, with equal numbers of classical TTS (CTTS) and weak-line TTS (WTTS). There are six other objects that we classify as possible PMS stars. The newly discovered TTS stars have masses in the range ~0.9-3.0 Msolar and ages from <1 to nearly 10 Myr, based on the Siess, Dufour & Forestini isochrones. Their location close to the O and B stars of the association (especially the O7n star) demonstrates that low-mass star formation is indeed possible in such an apparently hostile environment dominated by early-type stars and that the latter must have been less effective in eroding the circumstellar discs of their lower-mass siblings compared with other OB associations (e.g. λ-Ori). We attribute this to the nature of the local environment, speculating that the bulk of molecular material, which shielded low-mass stars from the ionizing radiation of their early-type siblings, has only recently been removed.

  15. Habitable Zones Around Main-Sequence Stars: Dependence on Planetary Mass

    NASA Technical Reports Server (NTRS)

    Kopparapu, Ravi Kumar; Ramirez, Ramses M.; Kotte, James Schottel; Kasting, James F.; Domagal-Goldman, Shawn; Eymet, Vincent

    2014-01-01

    The ongoing discoveries of extra-solar planets are unveiling a wide range of terrestrial mass (size) planets around their host stars. In this Letter, we present estimates of habitable zones (HZs) around stars with stellar effective temperatures in the range 2600 K-7200 K, for planetary masses between 0.1M and 5M. Assuming H2O-(inner HZ) and CO2-(outer HZ) dominated atmospheres, and scaling the background N2 atmospheric pressure with the radius of the planet, our results indicate that larger planets have wider HZs than do smaller ones. Specifically, with the assumption that smaller planets will have less dense atmospheres, the inner edge of the HZ (runaway greenhouse limit) moves outward (approx.10% lower than Earth flux) for low mass planets due to larger greenhouse effect arising from the increased H2O column depth. For larger planets, the H2O column depth is smaller, and higher temperatures are needed before water vapor completely dominates the outgoing long-wave radiation. Hence the inner edge moves inward (approx.7% higher than Earth's flux). The outer HZ changes little due to the competing effects of the greenhouse effect and an increase in albedo. New, three-dimensional climate model results from other groups are also summarized, and we argue that further, independent studies are needed to verify their predictions. Combined with our previous work, the results presented here provide refined estimates of HZs around main-sequence stars and provide a step toward a more comprehensive analysis of HZs.

  16. HABITABLE ZONES AROUND MAIN-SEQUENCE STARS: DEPENDENCE ON PLANETARY MASS

    SciTech Connect

    Kopparapu, Ravi Kumar; Ramirez, Ramses M.; Kasting, James F.

    2014-06-01

    The ongoing discoveries of extra-solar planets are unveiling a wide range of terrestrial mass (size) planets around their host stars. In this Letter, we present estimates of habitable zones (HZs) around stars with stellar effective temperatures in the range 2600 K-7200 K, for planetary masses between 0.1 M {sub ⊕} and 5 M {sub ⊕}. Assuming H{sub 2}O-(inner HZ) and CO{sub 2}-(outer HZ) dominated atmospheres, and scaling the background N{sub 2} atmospheric pressure with the radius of the planet, our results indicate that larger planets have wider HZs than do smaller ones. Specifically, with the assumption that smaller planets will havemore » less dense atmospheres, the inner edge of the HZ (runaway greenhouse limit) moves outward (∼10% lower than Earth flux) for low mass planets due to larger greenhouse effect arising from the increased H{sub 2}O column depth. For larger planets, the H{sub 2}O column depth is smaller, and higher temperatures are needed before water vapor completely dominates the outgoing longwave radiation. Hence the inner edge moves inward (∼7% higher than Earth's flux). The outer HZ changes little due to the competing effects of the greenhouse effect and an increase in albedo. New, three-dimensional climate model results from other groups are also summarized, and we argue that further, independent studies are needed to verify their predictions. Combined with our previous work, the results presented here provide refined estimates of HZs around main-sequence stars and provide a step toward a more comprehensive analysis of HZs.« less

  17. Mass loss from pre-main-sequence accretion disks. I - The accelerating wind of FU Orionis

    NASA Technical Reports Server (NTRS)

    Calvet, Nuria; Hartmann, Lee; Kenyon, Scott J.

    1993-01-01

    We present evidence that the wind of the pre-main-sequence object FU Orionis arises from the surface of the luminous accretion disk. A disk wind model calculated assuming radiative equilibrium explains the differential behavior of the observed asymmetric absorption-line profiles. The model predicts that strong lines should be asymmetric and blueshifted, while weak lines should be symmetric and double-peaked due to disk rotation, in agreement with observations. We propose that many blueshifted 'shell' absorption features are not produced in a true shell of material, but rather form in a differentially expanding wind that is rapidly rotating. The inference of rapid rotation supports the proposal that pre-main-sequence disk winds are rotationally driven.

  18. ADIABATIC MASS LOSS IN BINARY STARS. II. FROM ZERO-AGE MAIN SEQUENCE TO THE BASE OF THE GIANT BRANCH

    SciTech Connect

    Ge, Hongwei; Chen, Xuefei; Han, Zhanwen

    2015-10-10

    In the limit of extremely rapid mass transfer, the response of a donor star in an interacting binary becomes asymptotically one of adiabatic expansion. We survey here adiabatic mass loss from Population I stars (Z = 0.02) of mass 0.10 M{sub ⊙}–100 M{sub ⊙} from the zero-age main sequence to the base of the giant branch, or to central hydrogen exhaustion for lower main sequence stars. The logarithmic derivatives of radius with respect to mass along adiabatic mass-loss sequences translate into critical mass ratios for runaway (dynamical timescale) mass transfer, evaluated here under the assumption of conservative mass transfer. Formore » intermediate- and high-mass stars, dynamical mass transfer is preceded by an extended phase of thermal timescale mass transfer as the star is stripped of most of its envelope mass. The critical mass ratio q{sub ad} (throughout this paper, we follow the convention of defining the binary mass ratio as q ≡ M{sub donor}/M{sub accretor}) above which this delayed dynamical instability occurs increases with advancing evolutionary age of the donor star, by ever-increasing factors for more massive donors. Most intermediate- or high-mass binaries with nondegenerate accretors probably evolve into contact before manifesting this instability. As they approach the base of the giant branch, however, and begin developing a convective envelope, q{sub ad} plummets dramatically among intermediate-mass stars, to values of order unity, and a prompt dynamical instability occurs. Among low-mass stars, the prompt instability prevails throughout main sequence evolution, with q{sub ad} declining with decreasing mass, and asymptotically approaching q{sub ad} = 2/3, appropriate to a classical isentropic n = 3/2 polytrope. Our calculated q{sub ad} values agree well with the behavior of time-dependent models by Chen and Han of intermediate-mass stars initiating mass transfer in the Hertzsprung gap. Application of our results to cataclysmic variables, as

  19. Tidal Disruptions of Main-sequence Stars of Varying Mass and Age: Inferences from the Composition of the Fallback Material

    NASA Astrophysics Data System (ADS)

    Gallegos-Garcia, Monica; Law-Smith, Jamie; Ramirez-Ruiz, Enrico

    2018-04-01

    We use a simple framework to calculate the time evolution of the composition of the fallback material onto a supermassive black hole arising from the tidal disruption of main-sequence stars. We study stars with masses between 0.8 and 3.0 M ⊙, at evolutionary stages from zero-age main sequence to terminal-age main sequence, built using the Modules for Experiments in Stellar Astrophysics code. We show that most stars develop enhancements in nitrogen (14N) and depletions in carbon (12C) and oxygen (16O) over their lifetimes, and that these features are more pronounced for higher mass stars. We find that, in an accretion-powered tidal disruption flare, these features become prominent only after the time of peak of the fallback rate and appear at earlier times for stars of increasing mass. We postulate that no severe compositional changes resulting from the fallback material should be expected near peak for a wide range of stellar masses and, as such, are unable to explain the extreme helium-to-hydrogen line ratios observed in some TDEs. On the other hand, the resulting compositional changes could help explain the presence of nitrogen-rich features, which are currently only detected after peak. When combined with the shape of the light curve, the time evolution of the composition of the fallback material provides a clear method to help constrain the nature of the disrupted star. This will enable a better characterization of the event by helping break the degeneracy between the mass of the star and the mass of the black hole when fitting tidal disruption light curves.

  20. Evolution models of helium white dwarf-main-sequence star merger remnants: the mass distribution of single low-mass white dwarfs

    NASA Astrophysics Data System (ADS)

    Zhang, Xianfei; Hall, Philip D.; Jeffery, C. Simon; Bi, Shaolan

    2018-02-01

    It is not known how single white dwarfs with masses less than 0.5Msolar -- low-mass white dwarfs -- are formed. One way in which such a white dwarf might be formed is after the merger of a helium-core white dwarf with a main-sequence star that produces a red giant branch star and fails to ignite helium. We use a stellar-evolution code to compute models of the remnants of these mergers and find a relation between the pre-merger masses and the final white dwarf mass. Combining our results with a model population, we predict that the mass distribution of single low-mass white dwarfs formed through this channel spans the range 0.37 to 0.5Msolar and peaks between 0.45 and 0.46Msolar. Helium white dwarf--main-sequence star mergers can also lead to the formation of single helium white dwarfs with masses up to 0.51Msolar. In our model the Galactic formation rate of single low-mass white dwarfs through this channel is about 8.7X10^-3yr^-1. Comparing our models with observations, we find that the majority of single low-mass white dwarfs (<0.5Msolar) are formed from helium white dwarf--main-sequence star mergers, at a rate which is about $2$ per cent of the total white dwarf formation rate.

  1. The Hyades main sequence

    NASA Astrophysics Data System (ADS)

    Eggen, O. J.

    1982-11-01

    Intermediate band, H-beta and RI observations of 72 Hyades cluster stars to V = 11 mag are reported and discussed. A modulus of 3.2 mag is derived on the basis of a comparison with field stars of large parallax. Also presented are observations of 98 main-sequence stars of the Hyades group that were previously found to be group members from kinematical considerations. Parallaxes of the group stars, computed on the assumption that they are members of an extended Hyades cluster, yield mean values of (U, V, W) = (+40.5, -18.4, -4.9) km/s, with dispersions of (2.3, 2.3, 6.0) km/s, compared with (+41.7, -18.4, -2.0) and (2.6, 1.3, 1.9) km/s for the brightest cluster members. It is noted that all the stars discussed can be considered as members of a supercluster in which only a slight relaxation control of the W velocities is present for stars far from the nucleus. Evidence is found, including that of the Praesepe cluster at Z = +80 pc, for some interchange between the U, V, and W velocities in stars farthest from the galactic plane, with the total cluster velocity being maintained.

  2. Coronal Activity in Low-Mass Pre-Main Sequence Stars: NGC 2264

    NASA Technical Reports Server (NTRS)

    Tebbe, H. J.; Patten, B. M.

    2000-01-01

    We present the preliminary results of an analysis of ROSAT images in the region of the populous young (age approx. 3 Myr) star-forming region NGC 2264. The cluster was imaged with the ROSAT HRI in two sets of pointings -- one set near the central region of the cluster, centered on the star LW Mon, and the other set in the southern part of the cluster, centered near the star V428 Mon, just south of the Cone Nebula. In total 113 unique X-ray sources have been identified in the ROSAT images with signal-to-noise ratios greater than 3. The limiting luminosities (log Lx(ergs/sec)) for 3-sigma detections are estimated to be 30.18, 30.23, and 30.08 for the northern field, southern field, and overlap region between the two fields respectively. Extensive optical photometry, classification spectroscopy, and proper motions, obtained from recent ground-based surveys of this region, were used to identify the most likely optical counterpart to each X-ray source. Although most of our X-ray selected sample appears to be associated with NGC 2264 members, we find that the vast majority of the cluster membership was undetected in the ROSAT HRI survey. The X-ray cumulative luminosity function for solar-mass stars in NGC 2264 shows that most of the low-mass members probably have X-ray luminosities similar to those seen for the X-ray brightest members of older clusters such as IC 2391/IC 2602 (age approx. 50 Myr) and the Pleiades (age approx. 100 Myr). This research was funded in part by the SAO Summer Intern Program and NASA grant NAG5-8120.

  3. An unusual very low-mass high-amplitude pre-main sequence periodic variable

    NASA Astrophysics Data System (ADS)

    Rodríguez-Ledesma, M. V.; Mundt, R.; Ibrahimov, M.; Messina, S.; Parihar, P.; Hessman, F. V.; Alves de Oliveira, C.; Herbst, W.

    2012-08-01

    Aims: We have investigated the nature of the variability of CHS 7797, an unusual periodic variable in the Orion Nebula Cluster. Methods: An extensive I-band photometric data set of CHS 7797 was compiled between 2004-2010 using various telescopes. Further optical data have been collected in R and z' bands. In addition, simultaneous observations of the ONC region including CHS 7797 were performed in the I,J,Ks & IRAC 3.6 and 4.5 μm bands over a time interval of ≈40 d. Results: CHS 7797 shows an unusual large-amplitude variation of ≈1.7 mag in the R,I, and z' bands with a period 17.786 ± 0.03 d (FAP = 1 × 10-15%). The amplitude of the brightness modulation decreases only slightly at longer wavelengths. The star is faint during ≈2/3 of the period and the shape of the phased light-curves for the seven different observing seasons shows minor changes and small-amplitude variations. Interestingly, there are no significant colour-flux correlations for λ ≲ 2 μm, while the object becomes redder when fainter at longer wavelengths. CHS 7797 has a spectral type of M 6 and an estimated mass between 0.04-0.1 M⊙. Conclusions: The analysis of the data suggests that the periodic variability of CHS 7797 is most probably caused by an orbital motion. Variability as a result of rotational brightness modulation by a hot spot is excluded by the lack of any colour-brightness correlation in the optical. The latter indicates that CHS 7797 is most probably occulted by circumstellar matter in which grains have grown from typical 0.1 μm to ≈1-2 μm sizes. We discuss two possible scenarios in which CHS 7797 is periodically eclipsed by structures in a disc, namely that CHS 7797 is a single object with a circumstellar disc, or that CHS 7797 is a binary system, similar to KH 15D, in which an inclined circumbinary disc is responsible of the variability. Possible reasons for the typical 0.3 mag variations in I-band at a given phase are discussed.

  4. Measuring the Mass of a Pre-Main Sequence Binary Star Through the Orbit of TWA 5A

    NASA Astrophysics Data System (ADS)

    Konopacky, Q. M.; Ghez, A. M.; McCabe, C.; Duchene, G.; Macintosh, B. A.

    2005-12-01

    We present the results of a five year monitoring campaign of the close binary TWA 5Aab in the TW Hydrae association, using speckle and adaptive optics on the W.M. Keck 10 m telescopes. These measurements were taken as part of our ongoing monitoring of pre-main sequence (PMS) binaries in an effort to increase the number of dynamically determined PMS masses and thereby calibrate the theoretical PMS evolutionary tracks. Our observations have allowed us to obtain the first determination of this system's astrometric orbit. We find an orbital period of 5.55 ± 0.07 years and a semi-major axis of 0.063 arcsec ± 0.004 arcsec. Combining these results with a kinematic distance, we calculate a total mass of 0.70 ± 0.24 M⊙ for this system. This mass measurement, as well as the estimated age of this system, are in best agreement with the model predictions of Baraffe et al. (1998), but are also consistent to within 1.6σ of all other models considered. Our formal significance is low due to our proper accounting of correlated uncertainties; these correlations are important and generally not accounted for in comparisons of this kind. Nonetheless, with only a few more years of observation, these models will be easily distinguished. Support for this work was provided by the NASA Astrobiology Institute, the NSF Science & Technology Center for AO, managed by UCSC (AST-9876783), and the Packard Foundation.

  5. Detection of [O III] at z ∼ 3: A Galaxy Above the Main Sequence, Rapidly Assembling Its Stellar Mass

    NASA Astrophysics Data System (ADS)

    Vishwas, Amit; Ferkinhoff, Carl; Nikola, Thomas; Parshley, Stephen C.; Schoenwald, Justin P.; Stacey, Gordon J.; Higdon, Sarah J. U.; Higdon, James L.; Weiss, Axel; Güsten, Rolf; Menten, Karl M.

    2018-04-01

    We detect bright emission in the far-infrared (far-IR) fine structure [O III] 88 μm line from a strong lensing candidate galaxy, H-ATLAS J113526.3-014605, hereafter G12v2.43, at z = 3.127, using the second-generation Redshift (z) and Early Universe Spectrometer (ZEUS-2) at the Atacama Pathfinder Experiment Telescope (APEX). This is only the fifth detection of this far-IR line from a submillimeter galaxy at the epoch of galaxy assembly. The observed [O III] luminosity of 7.1 × 109 ≤ft(\\tfrac{10}{μ }\\right) L ⊙ likely arises from H II regions around massive stars, and the amount of Lyman continuum photons required to support the ionization indicate the presence of (1.2–5.2) × 106 ≤ft(\\tfrac{10}{μ }\\right) equivalent O5.5 or higher stars, where μ would be the lensing magnification factor. The observed line luminosity also requires a minimum mass of ∼2 × 108 ≤ft(\\tfrac{10}{μ }\\right) M ⊙ in ionized gas, that is 0.33% of the estimated total molecular gas mass of 6 × 1010 ≤ft(\\tfrac{10}{μ }\\right) M ⊙. We compile multi-band photometry tracing rest-frame ultraviolet to millimeter continuum emission to further constrain the properties of this dusty high-redshift, star-forming galaxy. Via SED modeling we find G12v2.43 is forming stars at a rate of 916 ≤ft(\\tfrac{10}{μ }\\right) M ⊙ yr‑1 and already has a stellar mass of 8 × 1010 ≤ft(\\tfrac{10}{μ }\\right) M ⊙. We also constrain the age of the current starburst to be ≤slant 5 Myr, making G12v2.43 a gas-rich galaxy lying above the star-forming main sequence at z ∼ 3, undergoing a growth spurt, and it could be on the main sequence within the derived gas depletion timescale of ∼66 Myr.

  6. A Main Sequence For Quasars

    NASA Astrophysics Data System (ADS)

    Marziani, Paola; Sulentic, J. W.; Dultzin, D.; Negrete, A.; del Olmo, A.; Martínez-Carballo, M. A.; Stirpe, G. M.; D'Onofrio, M.; Perea, J.

    2016-10-01

    The 4D eigenvector 1 parameter space defined by Sulentic et al. may be seen as a surrogate H-R diagram for quasars. As in the stellar H-R diagram, a source sequence can be easily identified. In the case of quasars, the main sequence appears to be mainly driven by Eddington ratio. A transition Eddington ratio may in part explain the striking observational differences between quasars at opposite ends of the main sequence. The eigenvector-1 approach opens the door towards properly contextualized models of quasar physics, geometry and kinematics. We review some of the progress that has been made over the past 15 years, and point out still unsolved issues.

  7. A main sequence for quasars

    NASA Astrophysics Data System (ADS)

    Marziani, Paola; Dultzin, Deborah; Sulentic, Jack W.; Del Olmo, Ascensión; Negrete, C. A.; Martínez-Aldama, Mary L.; D'Onofrio, Mauro; Bon, Edi; Bon, Natasa; Stirpe, Giovanna M.

    2018-03-01

    The last 25 years saw a major step forward in the analysis of optical and UV spectroscopic data of large quasar samples. Multivariate statistical approaches have led to the definition of systematic trends in observational properties that are the basis of physical and dynamical modeling of quasar structure. We discuss the empirical correlates of the so-called “main sequence” associated with the quasar Eigenvector 1, its governing physical parameters and several implications on our view of the quasar structure, as well as some luminosity effects associated with the virialized component of the line emitting regions. We also briefly discuss quasars in a segment of the main sequence that includes the strongest FeII emitters. These sources show a small dispersion around a well-defined Eddington ratio value, a property which makes them potential Eddington standard candles.

  8. 2D and 3D Models of Convective Turbulence and Oscillations in Intermediate-Mass Main-Sequence Stars

    NASA Astrophysics Data System (ADS)

    Guzik, Joyce Ann; Morgan, Taylor H.; Nelson, Nicholas J.; Lovekin, Catherine; Kitiashvili, Irina N.; Mansour, Nagi N.; Kosovichev, Alexander

    2015-08-01

    We present multidimensional modeling of convection and oscillations in main-sequence stars somewhat more massive than the sun, using three separate approaches: 1) Applying the spherical 3D MHD ASH (Anelastic Spherical Harmonics) code to simulate the core convection and radiative zone. Our goal is to determine whether core convection can excite low-frequency gravity modes, and thereby explain the presence of low frequencies for some hybrid gamma Dor/delta Sct variables for which the envelope convection zone is too shallow for the convective blocking mechanism to drive g modes; 2) Using the 3D planar ‘StellarBox’ radiation hydrodynamics code to model the envelope convection zone and part of the radiative zone. Our goals are to examine the interaction of stellar pulsations with turbulent convection in the envelope, excitation of acoustic modes, and the role of convective overshooting; 3) Applying the ROTORC 2D stellar evolution and dynamics code to calculate evolution with a variety of initial rotation rates and extents of core convective overshooting. The nonradial adiabatic pulsation frequencies of these nonspherical models will be calculated using the 2D pulsation code NRO of Clement. We will present new insights into gamma Dor and delta Sct pulsations gained by multidimensional modeling compared to 1D model expectations.

  9. Hot Evolved Companions to Intermediate-Mass Main-Sequence Stars: Solving the Mystery of KOI-81

    NASA Astrophysics Data System (ADS)

    Gies, Douglas

    2010-09-01

    The NASA Kepler Science Team recently announced the discovery of twotransiting binaries that have "planets" hotter than their host stars.These systems probably represent the first known examples of white dwarfsformed through mass loss and transfer among intermediate mass, closebinary stars. Here we propose to obtain COS FUV spectroscopy of one ofthese systems, KOI-81, in order to detect the hot companion in a part of the spectrum where it is relatively bright. The spectral flux and Doppler shift measurements will yield the temperatures, masses, radii, and compositions of both components. These observations will provide our first opportunity to explore this previously hidden stage of close binary evolution.

  10. Discovery of Par 1802 as a Low-Mass, Pre-Main-Sequence Eclipsing Binary in the Orion Star-Forming Region

    NASA Astrophysics Data System (ADS)

    Cargile, P. A.; Stassun, K. G.; Mathieu, R. D.

    2008-02-01

    We report the discovery of a pre-main-sequence (PMS), low-mass, double-lined, spectroscopic, eclipsing binary in the Orion star-forming region. We present our observations, including radial velocities derived from optical high-resolution spectroscopy, and present an orbit solution that permits the determination of precise empirical masses for both components of the system. We find that Par 1802 is composed of two equal-mass (0.39 +/- 0.03, 0.40 +/- 0.03 M⊙) stars in a circular, 4.7 day orbit. There is strong evidence, such as the system exhibiting strong Li lines and a center-of-mass velocity consistent with cluster membership, that this system is a member of the Orion star-forming region and quite possibly the Orion Nebula Cluster, and therefore has an age of only a few million years. As there are currently only a few empirical mass and radius measurements for low-mass, PMS stars, this system presents an interesting test for the predictions of current theoretical models of PMS stellar evolution.

  11. X-Ray Properties of Low-mass Pre-main Sequence Stars in the Orion Trapezium Cluster

    NASA Astrophysics Data System (ADS)

    Schulz, Norbert S.; Huenemoerder, David P.; Günther, Moritz; Testa, Paola; Canizares, Claude R.

    2015-09-01

    The Chandra HETG Orion Legacy Project (HOLP) is the first comprehensive set of observations of a very young massive stellar cluster that provides high-resolution X-ray spectra of very young stars over a wide mass range (0.7-2.3 {M}⊙ ). In this paper, we focus on the six brightest X-ray sources with T Tauri stellar counterparts that are well-characterized at optical and infrared wavelengths. All stars show column densities which are substantially smaller than expected from optical extinction, indicating that the sources are located on the near side of the cluster with respect to the observer as well as that these stars are embedded in more dusty environments. Stellar X-ray luminosities are well above 1031 erg s-1, in some cases exceeding 1032 erg s-1 for a substantial amount of time. The stars during these observations show no flares but are persistently bright. The spectra can be well fit with two temperature plasma components of 10 MK and 40 MK, of which the latter dominates the flux by a ratio 6:1 on average. The total emission measures range between 3-8 × 1054 cm-3 and are comparable to active coronal sources. The fits to the Ne ix He-Like K-shell lines indicate forbidden to inter-combination line ratios consistent with the low-density limit. Observed abundances compare well with active coronal sources underlying the coronal nature of these sources. The surface flux in this sample of 0.6-2.3 {M}⊙ classical T Tauri stars shows that coronal activity increases significantly between ages 0.1 and 10 Myr. The results demonstrate the power of X-ray line diagnostics to study coronal properties of T Tauri stars in young stellar clusters.

  12. Theoretical studies of massive stars. I - Evolution of a 15-solar-mass star from the zero-age main sequence to neon ignition

    NASA Technical Reports Server (NTRS)

    Endal, A. S.

    1975-01-01

    The evolution of a star with mass 15 times that of the sun from the zero-age main sequence to neon ignition has been computed by the Henyey method. The hydrogen-rich envelope and all shell sources were explicitly included in the models. An algorithm has been developed for approximating the results of carbon burning, including the branching ratio for the C-12 + C-12 reaction and taking some secondary reactions into account. Penetration of the convective envelope into the core is found to be unimportant during the stages covered by the models. Energy transfer from the carbon-burning shell to the core by degenerate electron conduction becomes important after the core carbon-burning stage. Neon ignition will occur in a semidegenerate core and will lead to a mild 'flash.' Detailed numerical results are given in an appendix. Continuation of the calculations into later stages and variations with the total mass of the star will be discussed in later papers.

  13. Submillimeter studies of main-sequence stars

    NASA Technical Reports Server (NTRS)

    Zuckerman, B.; Becklin, E. E.

    1993-01-01

    JCMT maps of the 800-micron emission from Vega, Fomalhaut, and Beta Pictoris are interpreted to indicate that they are not ringed by large reservoirs of distant orbiting dust particles that are too cold to have been detected by IRAS. A search for 800-micron emission from stars in the Pleiades and Ursa Majoris open clusters is reported. In comparison with the mass of dust particles near T Tauri and Herbig Ae stars, the JCMT data indicate a decline in dust mass during the initial 3 x 10 exp 8 yr that a star spends on the main sequence that is at least as rapid as (time) exp -2. It is estimated that in the Kuiper belt the ratio of total mass carried by small particles to that carried by comets is orders of magnitude smaller than this ratio is 1 AU from the sun. If 800-micron opacities calculated by Pollack et al. (1993) are correct, then the particles with radii less than 100 microns that dominate the FIR fluxes measured by IRAS cannot entirely account for the measured 800-micron fluxes at Vega, Beta Pic, and Fomalhaut; larger particles must be present as well.

  14. FUV Spectroscopy Of Outflows And Disks Around The Intermediate Mass Pre-main-sequence Stars HD135344B And HD104237

    NASA Astrophysics Data System (ADS)

    Brown, Alexander; Herczeg, G.; Brown, J. M.; Walter, F. M.; Ayres, T. R.; DAOof TAU Team

    2011-01-01

    The intermediate-mass, pre-main-sequence (Herbig Ae/Fe) stars HD135344B (F4) and HD104237 (A8 IV-V) are both still surrounded by almost face-on circumstellar disks. The disk around HD135344B is a ``transitional'' disk with a 25 AU radius cleared inner hole but still with some gas and dust very close to the star. We have obtained FUV spectra of these stars using the HST COS and STIS spectrographs that show that both stars have dramatic high-velocity (terminal velocity = 300-400 km/s) outflows and rich fluorescently-excited molecular hydrogen emission, originating primarily from warm gas in their disks. We present these FUV spectra and outline the outflow and disk properties implied by the observed emission and absorption line profiles. The profiles and widths of the molecular hydrogen lines provide strong constraints on the location of the emitting regions. This work is supported by HST grants for GO projects 11828 and 11616, and Chandra grant GO9-0015X to the University of Colorado.

  15. Photometric Determination of the Mass Accretion Rates of Pre-main-sequence Stars. V. Recent Star Formation in the 30 Dor Nebula

    NASA Astrophysics Data System (ADS)

    De Marchi, Guido; Panagia, Nino; Beccari, Giacomo

    2017-09-01

    We report on the properties of the low-mass stars that recently formed in the central ˜ 2\\buildrel{ \\prime}\\over{.} 7× 2\\buildrel{ \\prime}\\over{.} 7 of 30 Dor, including the R136 cluster. Using the photometric catalog of De Marchi et al., based on observations with the Hubble Space Telescope, and the most recent extinction law for this field, we identify 1035 bona fide pre-main-sequence (PMS) stars showing {{H}}α excess emission at the 4σ level with an {{H}}α equivalent width of 20 Å or more. We find a wide spread in age spanning the range ˜ 0.1{--}50 {Myr}. We also find that the older PMS objects are placed in front of the R136 cluster and are separated from it by a conspicuous amount of absorbing material, indicating that star formation has proceeded from the periphery into the interior of the region. We derive physical parameters for all PMS stars, including masses m, ages t, and mass accretion rates {\\dot{M}}{acc}. To identify reliable correlations between these parameters, which are intertwined, we use a multivariate linear regression fit of the type {log}{\\dot{M}}{acc}=a× {log}t+b× {log}m+c. The values of a and b for 30 Dor are compatible with those found in NGC 346 and NGC 602. We extend the fit to a uniform sample of 1307 PMS stars with 0.5< m/{M}⊙ < 1.5 and t< 16 {Myr} in six star-forming regions in the Large and Small Magellanic Clouds and Milky Way with metallicities in the range of 0.1-1.0 {{Z}}⊙ . We find a=-0.59+/- 0.02 and b=0.78+/- 0.08. The residuals are systematically different between the six regions and reveal a strong correlation with metallicity Z, of the type c=(-3.69+/- 0.02)-(0.30+/- 0.04)× {log}Z/{Z}⊙ . A possible interpretation of this trend is that when the metallicity is higher so is the radiation pressure, and this limits the accretion process, in both its rate and duration. Based on observations with the NASA/ESA Hubble Space Telescope, obtained at the Space Telescope Science Institute, which is operated by

  16. Chromospheric variations in main-sequence stars

    NASA Technical Reports Server (NTRS)

    Baliunas, S. L.; Donahue, R. A.; Soon, J. H.; Horne, J. H.; Frazer, J.; Woodard-Eklund, L.; Bradford, M.; Rao, L. M.; Wilson, O. C.; Zhang, Q.

    1995-01-01

    The fluxes in passbands 0.1 nm wide and centered on the Ca II H and K emission cores have been monitored in 111 stars of spectral type F2-M2 on or near the main sequence in a continuation of an observing program started by O. C. Wilson. Most of the measurements began in 1966, with observations scheduled monthly until 1980, when observations were schedueld sevral times per week. The records, with a long-term precision of about 1.5%, display fluctuations that can be idntified with variations on timescales similar to the 11 yr cycle of solar activity as well as axial rotation, and the growth and decay of emitting regions. We present the records of chromospheric emission and general conclusions about variations in surface magnetic activity on timescales greater than 1 yr but less than a few decades. The results for stars of spectral type G0-K5 V indicate a pattern of change in rotation and chromospheric activity on an evolutionary timescale, in which (1) young stars exhibit high average levels of activity, rapid rotation rates, no Maunder minimum phase and rarely display a smooth, cyclic variation; (2) stars of intermediate age (approximately 1-2 Gyr for 1 solar mass) have moderate levels of activity and rotation rates, and occasional smooth cycles; and (3) stars as old as the Sun and older have slower rotation rates, lower activity levels and smooth cycles with occasional Maunder minimum-phases.

  17. Secular Resonances During Main-Sequence and Post-Main-Sequence Planetary System Dynamics

    NASA Astrophysics Data System (ADS)

    Smallwood, Jeremy L.

    We investigate gravitational perturbations of an asteroid belt by secular resonances. We ap- ply analytic and numerical models to main-sequence and post-main-sequence planetary systems. First, we investigate how the asteroid impact rate on the Earth is affected by the architecture of the planetary system. We find that the nu6 resonance plays an important role in the asteroid collision rate with the Earth. Compared to exoplanetary systems, the solar system is somewhat special in its lack of a super-Earth mass planet in the inner solar system. We therefore consider the effects of the presence of a super-Earth in the terrestrial planet region. We find a significant effect for super-Earths with a mass of around 10 M_{Earth} and a separation greater than about 0.7 AU. These results have implications for the habitability of exoplanetary systems. Secondly, we model white dwarf pollution by asteroids from secular resonances. In the past few decades, observations have revealed signatures of metals polluting the atmospheres of white dwarfs that require a continu- ous accretion of asteroids. We show that secular resonances driven by two outer companions can provide a source of pollution if an inner terrestrial planet is engulfed during the red-giant branch phase. Secular resonances may be a viable mechanism for the pollution of white dwarfs in a variety of exoplanetary system architectures including systems with two giant planets and systems with one giant planet and a binary star companion.

  18. Habitable zones around main sequence stars.

    PubMed

    Kasting, J F; Whitmire, D P; Reynolds, R T

    1993-01-01

    A one-dimensional climate model is used to estimate the width of the habitable zone (HZ) around our Sun and around other main sequence stars. Our basic premise is that we are dealing with Earth-like planets with CO2/H2O/N2 atmospheres and that habitability requires the presence of liquid water on the planet's surface. The inner edge of the HZ is determined in our model by loss of water via photolysis and hydrogen escape. The outer edge of the HZ is determined by the formation of CO2 clouds, which cool a planet's surface by increasing its albedo and by lowering the convective lapse rate. Conservative estimates for these distances in our own Solar System are 0.95 and 1.37 AU, respectively; the actual width of the present HZ could be much greater. Between these two limits, climate stability is ensured by a feedback mechanism in which atmospheric CO2 concentrations vary inversely with planetary surface temperature. The width of the HZ is slightly greater for planets that are larger than Earth and for planets which have higher N2 partial pressures. The HZ evolves outward in time because the Sun increases in luminosity as it ages. A conservative estimate for the width of the 4.6-Gyr continuously habitable zone (CHZ) is 0.95 to 1.15 AU. Stars later than F0 have main sequence lifetimes exceeding 2 Gyr and, so, are also potential candidates for harboring habitable planets. The HZ around an F star is larger and occurs farther out than for our Sun; the HZ around K and M stars is smaller and occurs farther in. Nevertheless, the widths of all of these HZs are approximately the same if distance is expressed on a logarithmic scale. A log distance scale is probably the appropriate scale for this problem because the planets in our own Solar System are spaced logarithmically and because the distance at which another star would be expected to form planets should be related to the star's mass. The width of the CHZ around other stars depends on the time that a planet is required to

  19. The ultracool dwarf DENIS-P J104814.7-395606. Chromospheres and coronae at the low-mass end of the main-sequence

    NASA Astrophysics Data System (ADS)

    Stelzer, B.; Alcalá, J.; Biazzo, K.; Ercolano, B.; Crespo-Chacón, I.; López-Santiago, J.; Martínez-Arnáiz, R.; Schmitt, J. H. M. M.; Rigliaco, E.; Leone, F.; Cupani, G.

    2012-01-01

    Context. Several diagnostics ranging from the radio to the X-ray band are suitable for investigating the magnetic activity of late-type stars. Empirical connections between the emission at different wavelengths place constraints on the nature and efficiency of the emission mechanism and the physical conditions in different atmospheric layers. The activity of ultracool dwarfs, at the low-mass end of the main-sequence, is poorly understood. Aims: We perform a multi-wavelength study of one of the nearest M9 dwarfs, DENIS-P J104814.7-395606 (4 pc), to examine its position within the group of magnetically active ultracool dwarfs, and, in general, advance our understanding of these objects by comparing them to early-M type dwarf stars and the Sun. Methods: We obtained an XMM-Newton observation of DENIS-P J104814.7-395606 and a broad-band spectrum from the ultraviolet to the near-infrared with X-Shooter. From this dataset, we derive the X-ray properties, stellar parameters, kinematics, and the emission-line spectrum tracing chromospheric activity. We integrate these data by compiling the activity parameters of ultracool dwarfs from the literature. Results: Our deep XMM-Newton observation provides the first X-ray detection of DENIS-P J104814.7-395606 (log Lx = 25.1), as well as the first measurement of its V band brightness (V = 17.35 mag). The flux-flux relations between X-ray and chromospheric activity indicators are here for the first time extended into the regime of the ultracool dwarfs. The approximate agreement of DENIS-P J104814.7-395606 and other ultracool dwarfs with flux-flux relations for early-M dwarfs suggests that the same heating mechanisms work in the atmospheres of ultracool dwarfs, albeit weaker as judged from their lower fluxes. The observed Balmer decrements of DENIS 1048-3956 are compatible with optically thick plasma in local thermal equilibrium (LTE) at low, nearly photospheric temperature or optically thin LTE plasma at 20 000 K. Describing the

  20. Habitable zones around main sequence stars

    NASA Technical Reports Server (NTRS)

    Kasting, James F.; Whitmire, Daniel P.; Reynolds, Ray T.

    1993-01-01

    A mechanism for stabilizing climate on the earth and other earthlike planets is described, and the physical processes that define the inner and outer boundaries of the habitable zone (HZ) around the sun and main sequence stars are discussed. Physical constraints on the HZ obtained from Venus and Mars are taken into account. A 1D climate model is used to estimate the width of the HZ and the continuously habitable zone around the sun, and the analysis is extended to other main sequence stars. Whether other stars have planets and where such planets might be located with respect to the HZ is addressed. The implications of the findings for NASA's SETI project are considered.

  1. Post-main-sequence planetary system evolution

    PubMed Central

    Veras, Dimitri

    2016-01-01

    The fates of planetary systems provide unassailable insights into their formation and represent rich cross-disciplinary dynamical laboratories. Mounting observations of post-main-sequence planetary systems necessitate a complementary level of theoretical scrutiny. Here, I review the diverse dynamical processes which affect planets, asteroids, comets and pebbles as their parent stars evolve into giant branch, white dwarf and neutron stars. This reference provides a foundation for the interpretation and modelling of currently known systems and upcoming discoveries. PMID:26998326

  2. Post-main-sequence planetary system evolution.

    PubMed

    Veras, Dimitri

    2016-02-01

    The fates of planetary systems provide unassailable insights into their formation and represent rich cross-disciplinary dynamical laboratories. Mounting observations of post-main-sequence planetary systems necessitate a complementary level of theoretical scrutiny. Here, I review the diverse dynamical processes which affect planets, asteroids, comets and pebbles as their parent stars evolve into giant branch, white dwarf and neutron stars. This reference provides a foundation for the interpretation and modelling of currently known systems and upcoming discoveries.

  3. Main sequence models for massive zero-metal stars

    NASA Technical Reports Server (NTRS)

    Cary, N.

    1974-01-01

    Zero-age main-sequence models for stars of 20, 10, 5, and 2 solar masses with no heavy elements are constructed for three different possible primordial helium abundances: Y=0.00, Y=0.23, and Y=0.30. The latter two values of Y bracket the range of primordial helium abundances cited by Wagoner. With the exceptions of the two 20 solar mass models that contain helium, these models are found to be self-consistent in the sense that the formation of carbon through the triple-alpha process during premain sequence contraction is not sufficient to bring the CN cycle into competition with the proton-proton chain on the ZAMS. The zero-metal models of the present study have higher surface and central temperatures, higher central densities, smaller radii, and smaller convective cores than do the population I models with the same masses.

  4. LUMINOSITY DISCREPANCY IN THE EQUAL-MASS, PRE-MAIN-SEQUENCE ECLIPSING BINARY PAR 1802: NON-COEVALITY OR TIDAL HEATING?

    SciTech Connect

    Gomez Maqueo Chew, Yilen; Stassun, Keivan G.; Hebb, Leslie

    Parenago 1802, a member of the {approx}1 Myr Orion Nebula Cluster, is a double-lined, detached eclipsing binary in a 4.674 day orbit, with equal-mass components (M{sub 2}/M{sub 1} = 0.985 {+-} 0.029). Here we present extensive VI{sub C} JHK{sub S} light curves (LCs) spanning {approx}15 yr, as well as a Keck/High Resolution Echelle Spectrometer (HIRES) optical spectrum. The LCs evince a third light source that is variable with a period of 0.73 days, and is also manifested in the high-resolution spectrum, strongly indicating the presence of a third star in the system, probably a rapidly rotating Classical T Tauri star.more » We incorporate this third light into our radial velocity and LC modeling of the eclipsing pair, measuring accurate masses (M{sub 1} = 0.391 {+-} 0.032 and M{sub 2} = 0.385 {+-} 0.032 M{sub Sun }), radii (R{sub 1} = 1.73 {+-} 0.02 and R{sub 2} = 1.62 {+-} 0.02 R{sub Sun }), and temperature ratio (T{sub eff,1}/T{sub eff,2} = 1.0924 {+-} 0.0017). Thus, the radii of the eclipsing stars differ by 6.9% {+-} 0.8%, the temperatures differ by 9.2% {+-} 0.2%, and consequently the luminosities differ by 62% {+-} 3%, despite having masses equal to within 3%. This could be indicative of an age difference of {approx}3 Multiplication-Sign 10{sup 5} yr between the two eclipsing stars, perhaps a vestige of the binary formation history. We find that the eclipsing pair is in an orbit that has not yet fully circularized, e = 0.0166 {+-} 0.003. In addition, we measure the rotation rate of the eclipsing stars to be 4.629 {+-} 0.006 days; they rotate slightly faster than their 4.674 day orbit. The non-zero eccentricity and super-synchronous rotation suggest that the eclipsing pair should be tidally interacting, so we calculate the tidal history of the system according to different tidal evolution theories. We find that tidal heating effects can explain the observed luminosity difference of the eclipsing pair, providing an alternative to the previously suggested age

  5. High-precision Radio and Infrared Astrometry of LSPM J1314+1320AB. II. Testing Pre-main-sequence Models at the Lithium Depletion Boundary with Dynamical Masses

    NASA Astrophysics Data System (ADS)

    Dupuy, Trent J.; Forbrich, Jan; Rizzuto, Aaron; Mann, Andrew W.; Aller, Kimberly; Liu, Michael C.; Kraus, Adam L.; Berger, Edo

    2016-08-01

    We present novel tests of pre-main-sequence models based on individual dynamical masses for the M7 binary LSPM J1314+1320AB. Joint analysis of Keck adaptive optics astrometric monitoring along with Very Long Baseline Array radio data from a companion paper yield component masses of 92.8 ± 0.6 M Jup (0.0885 ± 0.0006 M ⊙) and 91.7 ± 1.0 M Jup (0.0875 ± 0.0010 M ⊙) and a parallactic distance of 17.249 ± 0.013 pc. We find component luminosities consistent with the system being coeval at 80.8 ± 2.5 Myr, according to BHAC15 evolutionary models. The presence of lithium is consistent with model predictions, marking the first test of the theoretical lithium depletion boundary using ultracool dwarfs of known mass. However, we find that the evolutionary model-derived average effective temperature (2950 ± 5 K) is 180 K hotter than that given by a spectral type-{T}{eff} relation based on BT-Settl models (2770 ± 100 K). We suggest that the dominant source of this discrepancy is model radii being too small by ≈13%. In a test mimicking the typical application of models by observers, we derive masses on the H-R diagram using luminosity and BT-Settl temperature. The estimated masses are lower by {46}-19+16 % (2.0σ) than we measure dynamically and would imply that this is a system of ≈50 M Jup brown dwarfs, highlighting the large systematic errors possible in H-R diagram properties. This is the first time masses have been measured for ultracool (≥M6) dwarfs displaying spectral signatures of low gravity. Based on features in the infrared, LSPM J1314+1320AB appears to have higher gravity than typical Pleiades and AB Dor members, opposite the expectation given its younger age. The components of LSPM J1314+1320AB are now the nearest, lowest mass pre-main-sequence stars with direct mass measurements. Data presented herein were obtained at the W. M. Keck Observatory, which is operated as a scientific partnership among the California Institute of Technology, the

  6. Pre-main sequence variables in young cluster Stock 18

    NASA Astrophysics Data System (ADS)

    Sinha, Tirthendu; Sharma, Saurabh; Pandey, Rakesh; Pandey, Anil Kumar

    2018-04-01

    We have carried out multi-epoch deep I band photometry of the open cluster Stock 18 to search for variable stars in star forming regions. In the present study, we identified 65 periodic and 217 non-periodic variable stars. The periods of most of the periodic variables are between 2 hours to 15 days and their magnitude varies between 0.05 to 0.6 mag. We have derived spectral energy distributions for 48 probable pre-main sequence variables. Their average age and mass are 2.7 ± 0.3 Myrs and 2.7 ± 0.2 Mo, respectively.

  7. From protostellar to pre-main-sequence evolution

    NASA Astrophysics Data System (ADS)

    D'Antona, F.

    I summarize the status of pre-main-sequence evolutionary tracks starting from the first steps dating back to the concept of Hayashi track. Understanding of the dynamical protostellar phase in the vision of Palla & Stahler, who introduced the concept of the deuterium burning thermostat and of stellar birthline, provided for a long time a link between the dynamical and hydrostatic evolution. Disk accretion however changed considerably the view, but re-introducing some ambiguities which must still be solved. The limitations and uncertainties in the mass and age determination from models for young stellar objects are summarized, but the burning of light elements is still a powerful observational signature.

  8. Orbital motion in pre-main sequence binaries

    SciTech Connect

    Schaefer, G. H.; Prato, L.; Simon, M.

    2014-06-01

    We present results from our ongoing program to map the visual orbits of pre-main sequence (PMS) binaries in the Taurus star forming region using adaptive optics imaging at the Keck Observatory. We combine our results with measurements reported in the literature to analyze the orbital motion for each binary. We present preliminary orbits for DF Tau, T Tau S, ZZ Tau, and the Pleiades binary HBC 351. Seven additional binaries show curvature in their relative motion. Currently, we can place lower limits on the orbital periods for these systems; full solutions will be possible with more orbital coverage. Five othermore » binaries show motion that is indistinguishable from linear motion. We suspect that these systems are bound and might show curvature with additional measurements in the future. The observations reported herein lay critical groundwork toward the goal of measuring precise masses for low-mass PMS stars.« less

  9. DISSECTING THE QUASAR MAIN SEQUENCE: INSIGHT FROM HOST GALAXY PROPERTIES

    SciTech Connect

    Sun, Jiayi; Shen, Yue

    2015-05-01

    The diverse properties of broad-line quasars appear to follow a well-defined main sequence along which the optical Fe ii strength increases. It has been suggested that this sequence is mainly driven by the Eddington ratio (L/L{sub Edd}) of the black hole (BH) accretion. Shen and Ho demonstrated with quasar clustering analysis that the average BH mass decreases with increasing Fe ii strength when quasar luminosity is fixed, consistent with this suggestion. Here we perform an independent test by measuring the stellar velocity dispersion σ{sub *} (hence, the BH mass via the M–σ{sub *} relation) from decomposed host spectra in low-redshiftmore » Sloan Digital Sky Survey quasars. We found that at fixed quasar luminosity, σ{sub *} systematically decreases with increasing Fe ii strength, confirming that the Eddington ratio increases with Fe ii strength. We also found that at fixed luminosity and Fe ii strength, there is little dependence of σ{sub *} on the broad Hβ FWHM. These new results reinforce the framework that the Eddington ratio and orientation govern most of the diversity seen in broad-line quasar properties.« less

  10. The dynamics of post-main sequence planetary systems

    NASA Astrophysics Data System (ADS)

    Mustill, Alexander James

    2017-06-01

    The study of planetary systems after their host stars have left the main sequence is of fundamental importance for exoplanet science, as the most direct determination of the compositions of extra-Solar planets, asteroids and comets is in fact made by an analysis of the elemental abundances of the remnants of these bodies accreted into the atmospheres of white dwarfs.To understand how the accreted bodies relate to the source populations in the planetary system, and to model their dynamical delivery to the white dwarf, it is necessary to understand the effects of stellar evolution on bodies' orbits. On the red giant branch (RGB) and asymptotic giant branch (AGB) prior to becoming a white dwarf, stars expand to a large size (>1 au) and are easily deformed by orbiting planets, leading to tidal energy dissipation and orbital decay. They also lose half or more of their mass, causing the expansion of bodies' orbits. This mass loss increases the planet:star mass ratio, so planetary systems orbiting white dwarfs can be much less stable than those orbiting their main-sequence progenitors. Finally, small bodies in the system experience strong non-gravitational forces during the RGB and AGB: aerodynamic drag from the mass shed by the star, and strong radiation forces as the stellar luminosity reaches several thousand Solar luminosities.I will review these effects, focusing on planet--star tidal interactions and planet--asteroid interactions, and I will discuss some of the numerical challenges in modelling systems over their entire lifetimes of multiple Gyr.

  11. Massive pre-main-sequence stars in M17

    NASA Astrophysics Data System (ADS)

    Ramírez-Tannus, M. C.; Kaper, L.; de Koter, A.; Tramper, F.; Bik, A.; Ellerbroek, L. E.; Ochsendorf, B. B.; Ramírez-Agudelo, O. H.; Sana, H.

    2017-08-01

    The formation process of massive stars is still poorly understood. Massive young stellar objects (mYSOs) are deeply embedded in their parental clouds; these objects are rare, and thus typically distant, and their reddened spectra usually preclude the determination of their photospheric parameters. M17 is one of the best-studied H II regions in the sky, is relatively nearby, and hosts a young stellar population. We have obtained optical to near-infrared spectra of previously identified candidate mYSOs and a few OB stars in this region with X-shooter on the ESO Very Large Telescope. The large wavelength coverage enables a detailed spectroscopic analysis of the photospheres and circumstellar disks of these candidate mYSOs. We confirm the pre-main-sequence (PMS) nature of six of the stars and characterise the O stars. The PMS stars have radii that are consistent with being contracting towards the main sequence and are surrounded by a remnant accretion disk. The observed infrared excess and the double-peaked emission lines provide an opportunity to measure structured velocity profiles in the disks. We compare the observed properties of this unique sample of young massive stars with evolutionary tracks of massive protostars and propose that these mYSOs near the western edge of the H II region are on their way to become main-sequence stars ( 6-20 M⊙) after having undergone high mass accretion rates (Ṁacc 10-4-10-3M⊙yr-1). Their spin distribution upon arrival at the zero age main-sequence is consistent with that observed for young B stars, assuming conservation of angular momentum and homologous contraction. Based on observations collected at the European Southern Observatory at Paranal, Chile (ESO programmes 60.A-9404(A), 085.D-0741, 089.C-0874(A), and 091.C-0934(B)).The full normalised X-shooter spectra are available at the CDS via anonymous ftp to http://cdsarc.u-strasbg.fr (http://130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/604/A78

  12. Habitable Moons and Planets Around Post-Main Sequence Stars

    NASA Astrophysics Data System (ADS)

    Lorenz, R.

    2014-04-01

    Habitability is ephemeral, and arises against the backdrop of stellar evolution. Atmospheric modulation of incoming and outgoing radiative fluxes can restrict or extend the insolation domain in which habitable conditions can persist, and feedbacks (notably, silicate weathering of CO2) may fortuitously adapt that modulation to counteract evolving luminosity. But eventually the star will win. What happens then depends on the histories of stellar luminosity, and of stellar mass loss. While the enhancement of luminosity may render the outer solar system habitable in a classic radiative/convective equilibrium sense, a scenario studied in most detail in connection with Saturn's moon Titan, the enhanced solar wind associated with the latter may strip atmospheres unprotected by magnetic fields. The question of post-main sequence habitability is therefore not a simple one.

  13. Accretion in Close Pre-Main-Sequence Binaries

    NASA Astrophysics Data System (ADS)

    Ardila, David

    2010-09-01

    We propose to use COS to observe the circumbinary accretion flow in pre-main sequence binaries as a function of orbital phase. These observations will help us understand how the magnetosphere captures circumbinary gas, test model predictions regarding the importance of the mass ratio in directing the accretion flows, and study the kinematics of the gas filling the circumbinary gap. We will observe UZ Tau E {mass ratio q=0.3, e=0.33} and DQ Tau {q=1, e=0.58} in four phases, over three orbital periods, using G160M and G230L. The targets are Classical T Tauri stars for which the circumstellar disks are severely truncated. Our primary observables will be the CIV {1550 A} lines, formed at the footpoints of the accretion flow onto the star. We expect to observe the ebb and flow of the line shape, centroid, and flux as a function of orbital phase. The low-resolution NUV continuum observations will provide an independent measurement of the total accretion rate.

  14. On the Statistical Properties of the Lower Main Sequence

    NASA Astrophysics Data System (ADS)

    Angelou, George C.; Bellinger, Earl P.; Hekker, Saskia; Basu, Sarbani

    2017-04-01

    Astronomy is in an era where all-sky surveys are mapping the Galaxy. The plethora of photometric, spectroscopic, asteroseismic, and astrometric data allows us to characterize the comprising stars in detail. Here we quantify to what extent precise stellar observations reveal information about the properties of a star, including properties that are unobserved, or even unobservable. We analyze the diagnostic potential of classical and asteroseismic observations for inferring stellar parameters such as age, mass, and radius from evolutionary tracks of solar-like oscillators on the lower main sequence. We perform rank correlation tests in order to determine the capacity of each observable quantity to probe structural components of stars and infer their evolutionary histories. We also analyze the principal components of classic and asteroseismic observables to highlight the degree of redundancy present in the measured quantities and demonstrate the extent to which information of the model parameters can be extracted. We perform multiple regression using combinations of observable quantities in a grid of evolutionary simulations and appraise the predictive utility of each combination in determining the properties of stars. We identify the combinations that are useful and provide limits to where each type of observable quantity can reveal information about a star. We investigate the accuracy with which targets in the upcoming TESS and PLATO missions can be characterized. We demonstrate that the combination of observations from GAIA and PLATO will allow us to tightly constrain stellar masses, ages, and radii with machine learning for the purposes of Galactic and planetary studies.

  15. Main-Sequence O Stars in NGC 6231: Enhanced Winds

    NASA Astrophysics Data System (ADS)

    Morrison, Nancy D.

    Three late O-type main-sequence stars in the open cluster NGC 6231 will be observed with IUE at high dispersion, and their C IV and N V resonance-line profiles will be studied. From low-dispersion IUE observations, 10 members of the cluster have been found to have anomalously strong C IV resonance lines for their spectral types. Massa, Savage, and Cassinelli (1984) observed two of these "UV peculiar" stars (spectral types B0.5 V and B1 V) at high dispersion. They found that the C IV lines have a strong, broad, shortward-shifted absorption component, which suggests a greatly enhanced wind relative to the average for the spectral type. They proposed that the enhancement is due to an overabundance of C. Recently, however, Grigsby, Gordon, Morrison, and Zimba (1992) showed from optical spectra that these stars have normal C abundances. Thus, there is not yet a convincing explanation for these strikingly anomalous stellar winds. By extending the temperature range over which the phenomenon has been studied at high dispersion, however, we expect to gain new physical information. From wind modeling of the line profiles, we will derive mass-loss rates and terminal velocities, and we will test whether these winds are described by radiation-driven wind theory.

  16. HABITABLE ZONES OF POST-MAIN SEQUENCE STARS

    SciTech Connect

    Ramirez, Ramses M.; Kaltenegger, Lisa

    Once a star leaves the main sequence and becomes a red giant, its Habitable Zone (HZ) moves outward, promoting detectable habitable conditions at larger orbital distances. We use a one-dimensional radiative-convective climate and stellar evolutionary models to calculate post-MS HZ distances for a grid of stars from 3700 to 10,000 K (∼M1 to A5 stellar types) for different stellar metallicities. The post-MS HZ limits are comparable to the distances of known directly imaged planets. We model the stellar as well as planetary atmospheric mass loss during the Red Giant Branch (RGB) and Asymptotic Giant Branch (AGB) phases for super-Moons tomore » super-Earths. A planet can stay between 200 million years up to 9 Gyr in the post-MS HZ for our hottest and coldest grid stars, respectively, assuming solar metallicity. These numbers increase for increased stellar metallicity. Total atmospheric erosion only occurs for planets in close-in orbits. The post-MS HZ orbital distances are within detection capabilities of direct imaging techniques.« less

  17. On the Statistical Properties of the Lower Main Sequence

    SciTech Connect

    Angelou, George C.; Bellinger, Earl P.; Hekker, Saskia

    Astronomy is in an era where all-sky surveys are mapping the Galaxy. The plethora of photometric, spectroscopic, asteroseismic, and astrometric data allows us to characterize the comprising stars in detail. Here we quantify to what extent precise stellar observations reveal information about the properties of a star, including properties that are unobserved, or even unobservable. We analyze the diagnostic potential of classical and asteroseismic observations for inferring stellar parameters such as age, mass, and radius from evolutionary tracks of solar-like oscillators on the lower main sequence. We perform rank correlation tests in order to determine the capacity of each observablemore » quantity to probe structural components of stars and infer their evolutionary histories. We also analyze the principal components of classic and asteroseismic observables to highlight the degree of redundancy present in the measured quantities and demonstrate the extent to which information of the model parameters can be extracted. We perform multiple regression using combinations of observable quantities in a grid of evolutionary simulations and appraise the predictive utility of each combination in determining the properties of stars. We identify the combinations that are useful and provide limits to where each type of observable quantity can reveal information about a star. We investigate the accuracy with which targets in the upcoming TESS and PLATO missions can be characterized. We demonstrate that the combination of observations from GAIA and PLATO will allow us to tightly constrain stellar masses, ages, and radii with machine learning for the purposes of Galactic and planetary studies.« less

  18. Submillimeter Imaging of Dust Around Main Sequence Stars

    NASA Technical Reports Server (NTRS)

    Jewitt, David

    1998-01-01

    This grant was to image circumstellar dust disks surrounding main-sequence stars. The delivery of the SCUBA detector we had planned to use for this work was delayed repeatedly, leading us to undertake a majority of the observations with the UKT14 submillimeter detector at the JCMT (James Clerk Maxwell Telescope) and optical imagers and a coronagraph at the University of Hawaii 2.2-m telescope. Major findings under this grant include: (1) We discovered 5 asymmetries in the beta Pictoris regenerated dust disk. The discovery of these asymmetries was a surprise, since smearing due to Keplerian shear should eliminate most such features on timescales of a few thousand years. One exception is the "wing tilt" asymmetry, which we interpret as due to the scattering phase function of dust disk particles. From the wing tilt and a model of the phase function, we find a disk plane inclination to the line of sight of < 5 degrees. Other asymmetries (e.g. the butterfly asymmetry) suggest a disk that has been recently disturbed. We searched for possible nearby perturbers but found no clear candidates. Low mass stars (M dwarfs) and brown dwarfs would have fallen beneath the sensitivity threshhold of our survey, however. (2) We calculated a set of disk models to assess the detectability of dust disks around stars as a function of (a) distance, (b) disk, inclination (c) dust optical depth/mass, and (d) imaging resolution. These models guided our observational strategy on Mauna Kea. (3) We performed a coronagraphic survey of approx. 100 main-sequence stars in search of additional examples of circumstellar disks. The best new candidate disk, around the 5 M(sun) star BD+31deg.643, is distinguished by its large extent (few x 10( exp 3) AU). This disk, if real, cannot be rotationally supported. We suggest that the dust particles are ejected from a smaller, unseen disk (Kuiper Belt?) by strong radiation pressure forces due to the high luminosity central star. (4) SCUBA images of

  19. Prof. Hayashi's work on the pre-main sequence evolution and brown dwarfs

    NASA Astrophysics Data System (ADS)

    Nakano, Takenori

    2012-09-01

    Prof. Hayashi's work on the evolution of stars in the pre-main sequence stage is reviewed. The historical background and the process of finding the Hayashi phase are mentioned. The work on the evolution of low-mass stars is also reviewed including the determination of the bottom of the main sequence and evolution of brown dwarfs, and comparison is made with the other works in the same period.

  20. Circumstellar Material on and off the Main Sequence

    NASA Astrophysics Data System (ADS)

    Steele, Amy; Debes, John H.; Deming, Drake

    2017-06-01

    There is evidence of circumstellar material around main sequence, giant, and white dwarf stars that originates from the small-body population of planetary systems. These bodies tell us something about the chemistry and evolution of protoplanetary disks and the planetary systems they form. What happens to this material as its host star evolves off the main sequence, and how does that inform our understanding of the typical chemistry of rocky bodies in planetary systems? In this talk, I will discuss the composition(s) of circumstellar material on and off the main sequence to begin to answer the question, “Is Earth normal?” In particular, I look at three types of debris disks to understand the typical chemistry of planetary systems—young debris disks, debris disks around giant stars, and dust around white dwarfs. I will review the current understanding on how to infer dust composition for each class of disk, and present new work on constraining dust composition from infrared excesses around main sequence and giant stars. Finally, dusty and polluted white dwarfs hold a unique key to our understanding of the composition of rocky bodies around other stars. In particular, I will discuss WD1145+017, which has a transiting, disintegrating planetesimal. I will review what we know about this system through high speed photometry and spectroscopy and present new work on understanding the complex interplay of physics that creates white dwarf pollution from the disintegration of rocky bodies.

  1. Sequencing Cyclic Peptides by Multistage Mass Spectrometry

    PubMed Central

    Mohimani, Hosein; Yang, Yu-Liang; Liu, Wei-Ting; Hsieh, Pei-Wen; Dorrestein, Pieter C.; Pevzner, Pavel A.

    2012-01-01

    Some of the most effective antibiotics (e.g., Vancomycin and Daptomycin) are cyclic peptides produced by non-ribosomal biosynthetic pathways. While hundreds of biomedically important cyclic peptides have been sequenced, the computational techniques for sequencing cyclic peptides are still in their infancy. Previous methods for sequencing peptide antibiotics and other cyclic peptides are based on Nuclear Magnetic Resonance spectroscopy, and require large amount (miligrams) of purified materials that, for most compounds, are not possible to obtain. Recently, development of mass spectrometry based methods has provided some hope for accurate sequencing of cyclic peptides using picograms of materials. In this paper we develop a method for sequencing of cyclic peptides by multistage mass spectrometry, and show its advantages over single stage mass spectrometry. The method is tested on known and new cyclic peptides from Bacillus brevis, Dianthus superbus and Streptomyces griseus, as well as a new family of cyclic peptides produced by marine bacteria. PMID:21751357

  2. Domino effect in chemical accidents: main features and accident sequences.

    PubMed

    Darbra, R M; Palacios, Adriana; Casal, Joaquim

    2010-11-15

    The main features of domino accidents in process/storage plants and in the transportation of hazardous materials were studied through an analysis of 225 accidents involving this effect. Data on these accidents, which occurred after 1961, were taken from several sources. Aspects analyzed included the accident scenario, the type of accident, the materials involved, the causes and consequences and the most common accident sequences. The analysis showed that the most frequent causes are external events (31%) and mechanical failure (29%). Storage areas (35%) and process plants (28%) are by far the most common settings for domino accidents. Eighty-nine per cent of the accidents involved flammable materials, the most frequent of which was LPG. The domino effect sequences were analyzed using relative probability event trees. The most frequent sequences were explosion→fire (27.6%), fire→explosion (27.5%) and fire→fire (17.8%). Copyright © 2010 Elsevier B.V. All rights reserved.

  3. Finding the Onset of Convection in Main Sequence Stars

    NASA Technical Reports Server (NTRS)

    Simon, Theodore

    2003-01-01

    The primary goal of the work performed under this grant was to locate, if possible, the onset of subphotospheric convection zones in normal main sequence stars by using the presence of emission in high temperature lines in far ultraviolet spectra from the FUSE spacecraft as a proxy for convection. The change in stellar structure represented by this boundary between radiative and convective stars has always been difficult to find by other empirical means. A search was conducted through observations of a sample of A-type stars, which were somewhat hotter and more massive than the Sun, and which were carefully chosen to bridge the theoretically expected radiative/convective boundary line along the main sequence.

  4. The zero age main sequence of WIMP burners

    SciTech Connect

    Fairbairn, Malcolm; Scott, Pat; Edsjoe, Joakim

    2008-02-15

    We modify a stellar structure code to estimate the effect upon the main sequence of the accretion of weakly-interacting dark matter onto stars and its subsequent annihilation. The effect upon the stars depends upon whether the energy generation rate from dark matter annihilation is large enough to shut off the nuclear burning in the star. Main sequence weakly-interacting massive particles (WIMP) burners look much like proto-stars moving on the Hayashi track, although they are in principle completely stable. We make some brief comments about where such stars could be found, how they might be observed and more detailed simulations whichmore » are currently in progress. Finally we comment on whether or not it is possible to link the paradoxically hot, young stars found at the galactic center with WIMP burners.« less

  5. Solar Luminosity on the Main Sequence, Standard Model and Variations

    NASA Astrophysics Data System (ADS)

    Ayukov, S. V.; Baturin, V. A.; Gorshkov, A. B.; Oreshina, A. V.

    2017-05-01

    Our Sun became Main Sequence star 4.6 Gyr ago according Standard Solar Model. At that time solar luminosity was 30% lower than current value. This conclusion is based on assumption that Sun is fueled by thermonuclear reactions. If Earth's albedo and emissivity in infrared are unchanged during Earth history, 2.3 Gyr ago oceans had to be frozen. This contradicts to geological data: there was liquid water 3.6-3.8 Gyr ago on Earth. This problem is known as Faint Young Sun Paradox. We analyze luminosity change in standard solar evolution theory. Increase of mean molecular weight in the central part of the Sun due to conversion of hydrogen to helium leads to gradual increase of luminosity with time on the Main Sequence. We also consider several exotic models: fully mixed Sun; drastic change of pp reaction rate; Sun consisting of hydrogen and helium only. Solar neutrino observations however exclude most non-standard solar models.

  6. The SAMI Galaxy Survey: spatially resolving the main sequence of star formation

    NASA Astrophysics Data System (ADS)

    Medling, Anne M.; Cortese, Luca; Croom, Scott M.; Green, Andrew W.; Groves, Brent; Hampton, Elise; Ho, I.-Ting; Davies, Luke J. M.; Kewley, Lisa J.; Moffett, Amanda J.; Schaefer, Adam L.; Taylor, Edward; Zafar, Tayyaba; Bekki, Kenji; Bland-Hawthorn, Joss; Bloom, Jessica V.; Brough, Sarah; Bryant, Julia J.; Catinella, Barbara; Cecil, Gerald; Colless, Matthew; Couch, Warrick J.; Drinkwater, Michael J.; Driver, Simon P.; Federrath, Christoph; Foster, Caroline; Goldstein, Gregory; Goodwin, Michael; Hopkins, Andrew; Lawrence, J. S.; Leslie, Sarah K.; Lewis, Geraint F.; Lorente, Nuria P. F.; Owers, Matt S.; McDermid, Richard; Richards, Samuel N.; Sharp, Robert; Scott, Nicholas; Sweet, Sarah M.; Taranu, Dan S.; Tescari, Edoardo; Tonini, Chiara; van de Sande, Jesse; Walcher, C. Jakob; Wright, Angus

    2018-04-01

    We present the ˜800 star formation rate maps for the Sydney-AAO Multi-object Integral field spectrograph (SAMI) Galaxy Survey based on H α emission maps, corrected for dust attenuation via the Balmer decrement, that are included in the SAMI Public Data Release 1. We mask out spaxels contaminated by non-stellar emission using the [O III]/H β, [N II]/H α, [S II]/H α, and [O I]/H α line ratios. Using these maps, we examine the global and resolved star-forming main sequences of SAMI galaxies as a function of morphology, environmental density, and stellar mass. Galaxies further below the star-forming main sequence are more likely to have flatter star formation profiles. Early-type galaxies split into two populations with similar stellar masses and central stellar mass surface densities. The main-sequence population has centrally concentrated star formation similar to late-type galaxies, while galaxies >3σ below the main sequence show significantly reduced star formation most strikingly in the nuclear regions. The split populations support a two-step quenching mechanism, wherein halo mass first cuts off the gas supply and remaining gas continues to form stars until the local stellar mass surface density can stabilize the reduced remaining fuel against further star formation. Across all morphologies, galaxies in denser environments show a decreased specific star formation rate from the outside in, supporting an environmental cause for quenching, such as ram-pressure stripping or galaxy interactions.

  7. Cool circumstellar matter around nearby main-sequence stars

    NASA Technical Reports Server (NTRS)

    Walker, H. J.; Wolstencroft, R. D.

    1988-01-01

    Stars are presented which have characteristics similar to Vega and other main-sequence stars with cool dust disks, based on the IRAS Point Source Catalog fluxes. The objects are selected to have a 60-micron/100-micron ratio similar to Vega, Beta Pic, Alpha PsA, and Epsilon Eri, and they are also required to show evidence of extension in the IRAS Working Survey Database. The fluxes are modeled using a blackbody energy distribution. The temperatures derived range from 50 to 650 K. The diameters of the dust disks observed by IRAS are estimated.

  8. Evolution of Pre-Main Sequence Accretion Disks

    NASA Technical Reports Server (NTRS)

    Hartmann, Lee W.

    2004-01-01

    The aim of this project is to develop a comprehensive global picture of the physical conditions in, and evolutionary timescales of, pre-main sequence accretion disks. The results of this work will help constrain the initial conditions for planet formation. To this end we are developing much larger samples of 3-10 Myr-old stars to provide better empirical constraints on protoplanetary disk evolution; measuring disk accretion rates in these systems; and constructing detailed model disk structures consistent with observations to infer physical conditions such as grain growth in protoplanetary disks.

  9. Evolution of Pre-Main Sequence Accretion Disks

    NASA Technical Reports Server (NTRS)

    Hartmann, Lee W.

    2003-01-01

    The aim of this project is to develop a comprehensive global picture of the physical conditions in, and evolutionary timescales of, pre-main sequence accretion disks. The results of this work will help constrain the initial conditions for planet formation. To this end we are developing much larger samples of 3-10 Myr-old stars to provide better empirical constraints on protoplanetary disk evolution; measuring disk accretion rates in these systems; and constructing detailed model disk structures consistent with observations to infer physical conditions such as grain growth in protoplanetary disks.

  10. Pre-main sequence sun: a dynamic approach

    SciTech Connect

    Newman, M.J.; Winkler, K.H.A.

    1979-01-01

    The classical pre-main sequence evolutionary behavior found by Hayashi and his coworkers for the Sun depends crucially on the choice of initial conditions. The Hayashi picture results from beginning the calculation with an already centrally condensed, highly Jeans unstable object not terribly far removed from the stellar state initially. The present calculation follows the work of Larson in investigating the hydrodynamic collapse and self-gravitational accretion of an initially uniform, just Jeans unstable interstellar gas-dust cloud. The resulting picture for the early history of the Sun is quite different from that found by Hayashi. A rather small (R approx. = 2more » R/sub sun/), low-luminosity (L greater than or equal to L/sub sun/) protostellar core develops. A fully convective stellar core, characteristic of Hayashi's work, is not found during the accretion process, and can only develop, if at all, in the subsequent pre-main sequence Kelvin-Helmholtz contraction of the core. 3 figures, 1 table.« less

  11. Observations of normal main-sequence and giant B stars

    NASA Astrophysics Data System (ADS)

    When interpreting the continuous and line spectra of B stars, it is helpful to think in terms of a model consisting of a photosphere and a mantle which is the outer part of the atmosphere where the effects of nonradiative heating are seen. A survey of the spectra of these stars shows that conditions in the photosphere determine most of what is seen, and in the case of most B stars, the presence of the mantle can be detected only by a special effort. The shape of the visible continuum spectrum and the shape and absolute value of the UV continuous spectrum as determined from low resolution spectra are discussed. Effective temperature for B stars in the main sequence, including corrections for interstellar extinction and bolometric corrections are explored. The major constituents of B-type spectra, variation of the strength of line along the main sequence band, the UV spectra, UV line blocking, intrinsic colors, and variations in light and spectra are also examined.

  12. Protein Sequencing with Tandem Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Ziady, Assem G.; Kinter, Michael

    The recent introduction of electrospray ionization techniques that are suitable for peptides and whole proteins has allowed for the design of mass spectrometric protocols that provide accurate sequence information for proteins. The advantages gained by these approaches over traditional Edman Degradation sequencing include faster analysis and femtomole, sometimes attomole, sensitivity. The ability to efficiently identify proteins has allowed investigators to conduct studies on their differential expression or modification in response to various treatments or disease states. In this chapter, we discuss the use of electrospray tandem mass spectrometry, a technique whereby protein-derived peptides are subjected to fragmentation in the gas phase, revealing sequence information for the protein. This powerful technique has been instrumental for the study of proteins and markers associated with various disorders, including heart disease, cancer, and cystic fibrosis. We use the study of protein expression in cystic fibrosis as an example.

  13. Evolution of Pre-Main Sequence Accretion Disks

    NASA Technical Reports Server (NTRS)

    Hartmann, Lee W.

    2002-01-01

    The aim of this project is to develop a comprehensive global picture of the physical conditions in, and evolutionary timescales of, pre-main sequence accretion disks. The results of this work will help constrain the initial conditions for planet formation. To this end we plan to: (1) Develop much larger samples of 3-10 Myr-old stars to provide better empirical constraints on protoplanetary disk evolution; (2) Study the dusty emission and accretion rates in these systems, with ages closer to the expected epoch of (giant) planet formation at 3-10 Myr; and (3) Develop detailed model disk structures consistent with observations to infer physical conditions in protoplanetary disks and to constrain possible grain growth as the first stage of planetesimal formation.

  14. Evolution of Pre-Main Sequence Accretion Disks

    NASA Technical Reports Server (NTRS)

    Hartmann, Lee W.

    2000-01-01

    The aim of this project was to develop a comprehensive global picture of the physical conditions in, and evolutionary timescales of, pre-main sequence accretion disks. The results of this work will help constrain the initial conditions for planet formation. To this end we: (1) Developed detailed calculations of disk structure to study physical conditions and investigate the observational effects of grain growth in T Tauri disks; (2) Studied the dusty emission and accretion rates in older disk systems, with ages closer to the expected epoch of (giant) planet formation at 3-10 Myr, and (3) Began a project to develop much larger samples of 3-10 Myr-old stars to provide better empirical constraints on protoplanetary disk evolution.

  15. W134: A new pre-main-sequence double-lined spectroscopic binary

    NASA Technical Reports Server (NTRS)

    Padgett, Deborah L.; Stapelfeldt, Karl R.

    1994-01-01

    We report the discovery that the pre-main-sequence star Walker 134 in the young cluster NGC 2264 is a double-lined spectroscopic binary. Both components are G stars with strong Li I 6708 A absorption lines. Twenty radial velocity measurements have been used to determined the orbital elements of this system. The orbit has a period of 6.3532 +/- 0.0012 days and is circular within the limits of our velocity resolution; e less than 0.01. The total system mass is stellar mass sin(exp 3) i = 3.16 solar mass with a mass ratio of 1.04. Estimates for the orbit inclination angle and stellar radii place the system near the threshold for eclipse observability; howerver, no decrease in brightness was seen during two attempts at photometric monitoring. The circular orbit of W 134 fills an important gap in the period distribution of pre-main-sequence binaries and thereby constrains the effectiveness of tidal orbital circularization during the pre-main sequence.

  16. The circumstellar environments of dusty main sequence stars

    NASA Astrophysics Data System (ADS)

    Gebrim, Antonio S. Hales

    Our current understanding of the formation of planetary systems is strongly linked to astronomical observations of gas and dust around young stars. This thesis is dedicated to studying the physical conditions acting in the circumstellar environments of pre-main sequence and early main sequence dusty stars. These early stellar ages correspond to the timescales over which planets are thought to be formed. The first part of this work is dedicated to a search for dusty early A-type stars in the northern galactic plane. Data from the IPHAS Ha survey is first used to select a sample of galactic A-type stars. This sample is then correlated with data from the Spitzer Space Telescope in order to search for 8 microns and 24 microns excesses associated with warm dust orbiting the stars. The improved photometric sensitivities of these new galactic surveys allow the list of known galactic 'Vega-like' sources to be extended to unexplored optical magnitude ranges (13.5 < r < 18.5 mags). Only 1.1% of a sample of 3062 A-type stars with available optical to mid-infrared spectral energy distributions showed detectable excesses at 8 microns. Searching over 1860 stars observed at 24 microns yielded similar statistical results (1.2%). Only 10 stars have both 8 and 24 micron excesses. These results support the idea that warm dust located relatively close to the stars is rare in main sequence systems. Follow-up observations of this new sample of dust-excess stars will provide better insights into the properties of the systems. Resolved images are crucial for understanding the dynamics and evolution of proto-planetary disks. Observing the detailed disk structure requires high-contrast, high-spatial resolution imaging very close to the bright central star. As a consequence, only a handful of these systems have yet been resolved. The second part of this work shows how near-infrared Polarimetric Imaging on the 3.8 meter United Kingdom Infrared Telescope can be used to obtain reflected

  17. The Star-forming Main Sequence of Dwarf Low Surface Brightness Galaxies

    NASA Astrophysics Data System (ADS)

    McGaugh, Stacy S.; Schombert, James M.; Lelli, Federico

    2017-12-01

    We explore the star-forming properties of late-type, low surface brightness (LSB) galaxies. The star-forming main sequence ({SFR}-{M}* ) of LSB dwarfs has a steep slope, indistinguishable from unity (1.04 ± 0.06). They form a distinct sequence from more massive spirals, which exhibit a shallower slope. The break occurs around {M}* ≈ {10}10 {M}⊙ , and can also be seen in the gas mass—stellar mass plane. The global Kennicutt-Schmidt law ({SFR}-{M}g) has a slope of 1.47 ± 0.11 without the break seen in the main sequence. There is an ample supply of gas in LSB galaxies, which have gas depletion times well in excess of a Hubble time, and often tens of Hubble times. Only ˜ 3 % of this cold gas needs be in the form of molecular gas to sustain the observed star formation. In analogy with the faint, long-lived stars of the lower stellar main sequence, it may be appropriate to consider the main sequence of star-forming galaxies to be defined by thriving dwarfs (with {M}* < {10}10 {M}⊙ ), while massive spirals (with {M}* > {10}10 {M}⊙ ) are weary giants that constitute more of a turn-off population.

  18. Constraints on pre-main-sequence evolution from stellar pulsations

    NASA Astrophysics Data System (ADS)

    Casey, M. P.; Zwintz, K.; Guenther, D. B.

    2014-02-01

    Pulsating pre-main-sequence (PMS) stars afford the earliest opportunity in the lifetime of a star to which the concepts of asteroseismology can be applied. PMS stars should be structurally simpler than their evolved counterparts, thus (hopefully!) making any asteroseismic analysis relatively easier. Unfortunately, this isn't necessarily the case. The majority of these stars (around 80) are δ Scuti pulsators, with a couple of γ Doradus, γ Doradus - δ Scuti hybrids, and slowly pulsating B stars thrown into the mix. The majority of these stars have only been discovered within the last ten years, with the community still uncovering the richness of phenomena associated with these stars, many of which defy traditional asteroseismic analysis. A systematic asteroseismic analysis of all of the δ Scuti PMS stars was performed in order to get a better handle on the properties of these stars as a group. Some strange results have been found, including one star pulsating up to the theoretical acoustic cut-off frequency of the star, and a number of stars in which the most basic asteroseismic analysis suggests problems with the stars' positions in the Hertzsprung-Russell diagram. From this we get an idea of the\\break constraints - or lack thereof - that these results can put on PMS stellar evolution.

  19. Common Warm Dust Temperatures Around Main Sequence Stars

    NASA Technical Reports Server (NTRS)

    Morales, Farisa; Rieke, George; Werner, Michael; Stapelfeldt, Karl; Bryden, Geoffrey; Su, Kate

    2011-01-01

    We compare the properties of warm dust emission from a sample of main-sequence A-type stars (B8-A7) to those of dust around solar-type stars (F5-KO) with similar Spitzer Space Telescope Infrared Spectrograph/MIPS data and similar ages. Both samples include stars with sources with infrared spectral energy distributions that show evidence of multiple components. Over the range of stellar types considered, we obtain nearly the same characteristic dust temperatures (∼ 190 K and ∼60 K for the inner and outer dust components, respectively)-slightly above the ice evaporation temperature for the inner belts. The warm inner dust temperature is readily explained if populations of small grains are being released by sublimation of ice from icy planetesimals. Evaporation of low-eccentricity icy bodies at ∼ 150 K can deposit particles into an inner/warm belt, where the small grains are heated to dust Temperatures of -190 K. Alternatively, enhanced collisional processing of an asteroid belt-like system of parent planetesimals just interior to the snow line may account for the observed uniformity in dust temperature. The similarity in temperature of the warmer dust across our B8-KO stellar sample strongly suggests that dust-producing planetesimals are not found at similar radial locations around all stars, but that dust production is favored at a characteristic temperature horizon.

  20. Habitable zone lifetimes of exoplanets around main sequence stars.

    PubMed

    Rushby, Andrew J; Claire, Mark W; Osborn, Hugh; Watson, Andrew J

    2013-09-01

    The potential habitability of newly discovered exoplanets is initially assessed by determining whether their orbits fall within the circumstellar habitable zone of their star. However, the habitable zone (HZ) is not static in time or space, and its boundaries migrate outward at a rate proportional to the increase in luminosity of a star undergoing stellar evolution, possibly including or excluding planets over the course of the star's main sequence lifetime. We describe the time that a planet spends within the HZ as its "habitable zone lifetime." The HZ lifetime of a planet has strong astrobiological implications and is especially important when considering the evolution of complex life, which is likely to require a longer residence time within the HZ. Here, we present results from a simple model built to investigate the evolution of the "classic" HZ over time, while also providing estimates for the evolution of stellar luminosity over time in order to develop a "hybrid" HZ model. These models return estimates for the HZ lifetimes of Earth and 7 confirmed HZ exoplanets and 27 unconfirmed Kepler candidates. The HZ lifetime for Earth ranges between 6.29 and 7.79×10⁹ years (Gyr). The 7 exoplanets fall in a range between ∼1 and 54.72 Gyr, while the 27 Kepler candidate planets' HZ lifetimes range between 0.43 and 18.8 Gyr. Our results show that exoplanet HD 85512b is no longer within the HZ, assuming it has an Earth analog atmosphere. The HZ lifetime should be considered in future models of planetary habitability as setting an upper limit on the lifetime of any potential exoplanetary biosphere, and also for identifying planets of high astrobiological potential for continued observational or modeling campaigns.

  1. SPATIALLY RESOLVED STAR FORMATION MAIN SEQUENCE OF GALAXIES IN THE CALIFA SURVEY

    SciTech Connect

    Cano-Díaz, M.; Sánchez, S. F.; Zibetti, S.

    2016-04-20

    The “main sequence of galaxies”–defined in terms of the total star formation rate ψ versus the total stellar mass M {sub *}—is a well-studied tight relation that has been observed at several wavelengths and at different redshifts. All earlier studies have derived this relation from integrated properties of galaxies. We recover the same relation from an analysis of spatially resolved properties, with integral field spectroscopic (IFS) observations of 306 galaxies from the CALIFA survey. We consider the SFR surface density in units of log( M {sub ⊙} yr{sup −1} Kpc{sup −2}) and the stellar mass surface density in units ofmore » log( M {sub ⊙} Kpc{sup −2}) in individual spaxels that probe spatial scales of 0.5–1.5 Kpc. This local relation exhibits a high degree of correlation with small scatter ( σ = 0.23 dex), irrespective of the dominant ionization source of the host galaxy or its integrated stellar mass. We highlight (i) the integrated star formation main sequence formed by galaxies whose dominant ionization process is related to star formation, for which we find a slope of 0.81 ± 0.02; (ii) for the spatially resolved relation obtained with the spaxel analysis, we find a slope of 0.72 ± 0.04; and (iii) for the integrated main sequence, we also identified a sequence formed by galaxies that are dominated by an old stellar population, which we have called the retired galaxies sequence.« less

  2. The Winds of Main Sequence B Stars in NGC 6231, Evidence for Shocks in Weak Winds.

    NASA Astrophysics Data System (ADS)

    Massa, Derck

    1996-07-01

    Because the main sequence B stars in NGC 6231 have abnormallystrong C iv wind lines, they are the only main sequence Bstars with distinct edge velocities. Although the underlyingcause for the strong lines remains unknown, these stars doprovide an opportunity to test two important ideas concerningB star winds: 1) that the driving ions in the winds of starswith low mass loss rates decouple from the general flow, and;2) that shocks deep in the winds of main sequence B stars areresponsible for their observed X-rays. In both of thesemodels, the wind accelerates toward a terminal velocity,v_infty, far greater than the observed value, shocking ordecoupling well before it can attain the high v_infty. As aresult, the observable wind accelerates very rapidly, leadingto wind flushing times less than 30 minutes. If theseconjectures are correct, then the winds of main sequence Bstars should be highly variable on time scales of minutes.Model fitting of available IUE data are consistant with thegeneral notion of a rapidly accelerating wind, shocking wellbefore its actual v_infty. However, these are 5 hourexposures, so the fits are to ill-defined mean wind flows.The new GHRS observations will provide adequate spectral andtemporal resolution to observe the expected variability and,thereby, verify the existance of two important astrophysicalprocesses.

  3. Spectroscopic investigation of stars on the lower main sequence

    NASA Astrophysics Data System (ADS)

    Mishenina, T. V.; Soubiran, C.; Bienaymé, O.; Korotin, S. A.; Belik, S. I.; Usenko, I. A.; Kovtyukh, V. V.

    2008-10-01

    Aims: The aim of this paper is to provide fundamental parameters and abundances with a high accuracy for a large sample of cool main sequence stars. This study is part of wider project, in which the metallicity distribution of the local thin disc is investigated from a complete sample of G and K dwarfs within 25 pc. Methods: The stars were observed at high resolution and a high signal-to-noise ratio with the ELODIE echelle spectrograph. The V sin i were obtained with a calibration of the cross-correlation function. Effective temperatures were estimated by the line depth ratio method. Surface gravities (log g) were determined by two methods: parallaxes and ionization balance of iron. The Mg and Na abundances were derived using a non-LTE approximation. Abundances of other elements were obtained by measuring equivalent widths. Results: Rotational velocities, atmospheric parameters (T_eff, log g, [Fe/H], V_t), and Li, O, Na, Mg, Al, Si, Ca, Sc, Ti, V, Cr, Co, Ni, and Zn abundances are provided for 131 stars. Among them, more than 30 stars are active stars with a fraction of BY Dra and RS CVn type stars for which spectral peculiarities were investigated. We find the mean abundances of the majority of elements in active and nonactive stars to be similar, except for Li, and possibly for Zn and Co. The lithium is reliably detected in 54% of active stars but only in 20% of nonactive stars. No correlation is found between Li abundances and rotational velocities. A possible anticorrelation of log A(Li) with the index of chromospheric activity GrandS is observed. Conclusions: Active and nonactive cool dwarfs show similar dependencies of most elemental ratios vs. [Fe/H]. This allows us to use such abundance ratios to study the chemical and dynamical evolution of the Galaxy. Among active stars, no clear correlation has been found between different indicators of activity for our sample stars. Based on spectra collected with the ELODIE spectrograph at the 1.93-m telescope of the

  4. Lithium in lower-main-sequence stars of the Alpha Persei cluster

    NASA Technical Reports Server (NTRS)

    Balachandran, Suchitra; Lambert, David L.; Stauffer, John R.

    1988-01-01

    Lithium abundances are presented for main-sequence stars of spectral types F, G, and K in the young open cluster Alpha Per. For 46 cluster members, a correlation between Li abundance and projected rotational velocity v sin i is found: all of the Li-poor stars are slow rotators. Two explanations are proposed to account for the correlation: (1) that the Li depletion is introduced following a rapid spin-down phase experienced by young low-mass stars, and that this episode of Li depletion may be the dominant one determining the spread of Li abundances among young low-mass main-sequence stars, and (2) that star formation has occurred over a finite period such that the older stars have undergone a spin-down and depletion of Li by a means that may or may not depend on rotation. The Li abundance in the warm and rapidly rotating stars appears to be undepleted, as is predicted by recent models of pre-main-sequence stars. The depletion observed in the cool stars exceeds the level predicted by these models.

  5. Elevation or Suppression? The Resolved Star Formation Main Sequence of Galaxies with Two Different Assembly Modes

    NASA Astrophysics Data System (ADS)

    Liu, Qing; Wang, Enci; Lin, Zesen; Gao, Yulong; Liu, Haiyang; Berhane Teklu, Berzaf; Kong, Xu

    2018-04-01

    We investigate the spatially resolved star formation main sequence in star-forming galaxies using Integral Field Spectroscopic observations from the Mapping Nearby Galaxies at the Apache Point Observatory survey. We demonstrate that the correlation between the stellar mass surface density (Σ*) and star formation rate surface density (ΣSFR) holds down to the sub-galactic scale, leading to the sub-galactic main sequence (SGMS). By dividing galaxies into two populations based on their recent mass assembly modes, we find the resolved main sequence in galaxies with the “outside-in” mode is steeper than that in galaxies with the “inside-out” mode. This is also confirmed on a galaxy-by-galaxy level, where we find the distributions of SGMS slopes for individual galaxies are clearly separated for the two populations. When normalizing and stacking the SGMS of individual galaxies on one panel for the two populations, we find that the inner regions of galaxies with the “inside-out” mode statistically exhibit a suppression in star formation, with a less significant trend in the outer regions of galaxies with the “outside-in” mode. In contrast, the inner regions of galaxies with “outside-in” mode and the outer regions of galaxies with “inside-out” mode follow a slightly sublinear scaling relation with a slope ∼0.9, which is in good agreement with previous findings, suggesting that they are experiencing a universal regulation without influences of additional physical processes.

  6. X-rays across the galaxy population - I. Tracing the main sequence of star formation

    NASA Astrophysics Data System (ADS)

    Aird, J.; Coil, A. L.; Georgakakis, A.

    2017-03-01

    We use deep Chandra imaging to measure the distribution of X-ray luminosities (LX) for samples of star-forming galaxies as a function of stellar mass and redshift, using a Bayesian method to push below the nominal X-ray detection limits. Our luminosity distributions all show narrow peaks at LX ≲ 1042 erg s-1 that we associate with star formation, as opposed to AGN that are traced by a broad tail to higher LX. Tracking the luminosity of these peaks as a function of stellar mass reveals an 'X-ray main sequence' with a constant slope ≈0.63 ± 0.03 over 8.5 ≲ log {M}_{ast }/M_{⊙} ≲ 11.5 and 0.1 ≲ z ≲ 4, with a normalization that increases with redshift as (1 + z)3.79 ± 0.12. We also compare the peak X-ray luminosities with UV-to-IR tracers of star formation rates (SFRs) to calibrate the scaling between LX and SFR. We find that LX ∝ SFR0.83 × (1 + z)1.3, where the redshift evolution and non-linearity likely reflect changes in high-mass X-ray binary populations of star-forming galaxies. Using galaxies with a broader range of SFR, we also constrain a stellar-mass-dependent contribution to LX, likely related to low-mass X-ray binaries. Using this calibration, we convert our X-ray main sequence to SFRs and measure a star-forming main sequence with a constant slope ≈0.76 ± 0.06 and a normalization that evolves with redshift as (1 + z)2.95 ± 0.33. Based on the X-ray emission, there is no evidence for a break in the main sequence at high stellar masses, although we cannot rule out a turnover given the uncertainties in the scaling of LX to SFR.

  7. Pre-main-sequence isochrones - II. Revising star and planet formation time-scales

    NASA Astrophysics Data System (ADS)

    Bell, Cameron P. M.; Naylor, Tim; Mayne, N. J.; Jeffries, R. D.; Littlefair, S. P.

    2013-09-01

    We have derived ages for 13 young (<30 Myr) star-forming regions and find that they are up to a factor of 2 older than the ages typically adopted in the literature. This result has wide-ranging implications, including that circumstellar discs survive longer (≃ 10-12 Myr) and that the average Class I lifetime is greater (≃1 Myr) than currently believed. For each star-forming region, we derived two ages from colour-magnitude diagrams. First, we fitted models of the evolution between the zero-age main sequence and terminal-age main sequence to derive a homogeneous set of main-sequence ages, distances and reddenings with statistically meaningful uncertainties. Our second age for each star-forming region was derived by fitting pre-main-sequence stars to new semi-empirical model isochrones. For the first time (for a set of clusters younger than 50 Myr), we find broad agreement between these two ages, and since these are derived from two distinct mass regimes that rely on different aspects of stellar physics, it gives us confidence in the new age scale. This agreement is largely due to our adoption of empirical colour-Teff relations and bolometric corrections for pre-main-sequence stars cooler than 4000 K. The revised ages for the star-forming regions in our sample are: ˜2 Myr for NGC 6611 (Eagle Nebula; M 16), IC 5146 (Cocoon Nebula), NGC 6530 (Lagoon Nebula; M 8) and NGC 2244 (Rosette Nebula); ˜6 Myr for σ Ori, Cep OB3b and IC 348; ≃10 Myr for λ Ori (Collinder 69); ≃11 Myr for NGC 2169; ≃12 Myr for NGC 2362; ≃13 Myr for NGC 7160; ≃14 Myr for χ Per (NGC 884); and ≃20 Myr for NGC 1960 (M 36).

  8. Lithium abundances among solar-type pre-main-sequence stars

    NASA Technical Reports Server (NTRS)

    Strom, Karen M.; Wilkin, Francis P.; Strom, Stephen E.; Seaman, Robert L.

    1989-01-01

    Measurements of Li I 6707 A line strengths were carried out for two samples of pre-main-sequence (PMS) stars (L 1641 and Taurus-Auriga), and the Li abundances estimated for PMS stars are compared with those deduced from observations of Li line strengths for main-sequence stars in the Alpha Persei cluster. It was found that the maximum Li abundances among the PMS stars with solar mass values greater than 1.0 exceed the maximum abundances for Alpha Per stars by at least 0.3 dex. Some PMS stars, including few apparently young stars, showed large (greater than 1.0 dex) Li depletion, and some apparently old PMS stars showed little or no depletion.

  9. Isolating Added Mass Load Components of CPAS Main Clusters

    NASA Technical Reports Server (NTRS)

    Ray, Eric S.

    2017-01-01

    The current simulation for the Capsule Parachute Assembly System (CPAS) lacks fidelity in representing added mass for the 116 ft Do ringsail Main parachute. The availability of 3-D models of inflating Main canopies allowed for better estimation the enclosed air volume as a function of time. This was combined with trajectory state information to estimate the components making up measured axial loads. A proof-of-concept for an alternate simulation algorithm was developed based on enclosed volume as the primary independent variable rather than drag area growth. Databases of volume growth and parachute drag area vs. volume were developed for several flight tests. Other state information was read directly from test data, rather than numerically propagated. The resulting simulated peak loads were close in timing and magnitude to the measured loads data. However, results are very sensitive to data curve fitting and may not be suitable for Monte Carlo simulations. It was assumed that apparent mass was either negligible or a small fraction of enclosed mass, with little difference in results.

  10. Theory of winds in late-type evolved and pre-main-sequence stars

    NASA Technical Reports Server (NTRS)

    Macgregor, K. B.

    1983-01-01

    Recent observational results confirm that many of the physical processes which are known to occur in the Sun also occur among late-type stars in general. One such process is the continuous loss of mass from a star in the form of a wind. There now exists an abundance of either direct or circumstantial evidence which suggests that most (if not all) stars in the cool portion of the HR diagram possess winds. An attempt is made to assess the current state of theoretical understanding of mass loss from two distinctly different classes of late-type stars: the post-main-sequence giant/supergiant stars and the pre-main-sequence T Tauri stars. Toward this end, the observationally inferred properties of the wind associated with each of the two stellar classes under consideration are summarized and compared against the predictions of existing theoretical models. Although considerable progress has been made in attempting to identify the mechanisms responsible for mass loss from cool stars, many fundamental problems remain to be solved.

  11. ABSOLUTE PROPERTIES OF THE PRE-MAIN-SEQUENCE ECLIPSING BINARY STAR NP PERSEI

    SciTech Connect

    Lacy, Claud H. Sandberg; Fekel, Francis C.; Muterspaugh, Matthew W.

    2016-07-01

    NP Per is a well-detached, 2.2 day eclipsing binary whose components are both pre-main-sequence stars that are still contracting toward the main-sequence phase of evolution. We report extensive photometric and spectroscopic observations with which we have determined their properties accurately. Their surface temperatures are quite different: 6420 ± 90 K for the larger F5 primary star and 4540 ± 160 K for the smaller K5e star. Their masses and radii are 1.3207 ± 0.0087 solar masses and 1.372 ± 0.013 solar radii for the primary, and 1.0456 ± 0.0046 solar masses and 1.229 ± 0.013 solar radii for the secondary. The orbital period is variable over long periods of time. A comparisonmore » of the observations with current stellar evolution models from MESA indicates that the stars cannot be fit at a single age: the secondary appears significantly younger than the primary. If the stars are assumed to be coeval and to have the age of the primary (17 Myr), then the secondary is larger and cooler than predicted by current models. The H α spectral line of the secondary component is completely filled by, presumably, chromospheric emission due to a magnetic activity cycle.« less

  12. Discovery and characterization of 3000+ main-sequence binaries from APOGEE spectra

    NASA Astrophysics Data System (ADS)

    El-Badry, Kareem; Ting, Yuan-Sen; Rix, Hans-Walter; Quataert, Eliot; Weisz, Daniel R.; Cargile, Phillip; Conroy, Charlie; Hogg, David W.; Bergemann, Maria; Liu, Chao

    2018-05-01

    We develop a data-driven spectral model for identifying and characterizing spatially unresolved multiple-star systems and apply it to APOGEE DR13 spectra of main-sequence stars. Binaries and triples are identified as targets whose spectra can be significantly better fit by a superposition of two or three model spectra, drawn from the same isochrone, than any single-star model. From an initial sample of ˜20 000 main-sequence targets, we identify ˜2500 binaries in which both the primary and secondary stars contribute detectably to the spectrum, simultaneously fitting for the velocities and stellar parameters of both components. We additionally identify and fit ˜200 triple systems, as well as ˜700 velocity-variable systems in which the secondary does not contribute detectably to the spectrum. Our model simplifies the process of simultaneously fitting single- or multi-epoch spectra with composite models and does not depend on a velocity offset between the two components of a binary, making it sensitive to traditionally undetectable systems with periods of hundreds or thousands of years. In agreement with conventional expectations, almost all the spectrally identified binaries with measured parallaxes fall above the main sequence in the colour-magnitude diagram. We find excellent agreement between spectrally and dynamically inferred mass ratios for the ˜600 binaries in which a dynamical mass ratio can be measured from multi-epoch radial velocities. We obtain full orbital solutions for 64 systems, including 14 close binaries within hierarchical triples. We make available catalogues of stellar parameters, abundances, mass ratios, and orbital parameters.

  13. Evolution of Pre-Main Sequence Accretion Disks

    NASA Technical Reports Server (NTRS)

    Hartmann, Lee W.

    2005-01-01

    The aim of this project was to develop a comprehensive global picture of the physical conditions in, and evolutionary timescales of, premain sequence accretion disks. The results of this work will help constrain the initial conditions for planet formation. To this end we developed much larger samples of 3-10 Myr-old stars to provide better empirical constraints on protoplanetary disk evolution; measured disk accretion rates in these systems; and constructed detailed model disk structures consistent with observations to infer physical conditions such as grain growth in protoplanetary disks.

  14. VizieR Online Data Catalog: NGC 7129 pre-main sequence stars (Stelzer+, 2009)

    NASA Astrophysics Data System (ADS)

    Stelzer, B.; Scholz, A.

    2010-09-01

    We make use of X-ray and IR imaging observations to identify the pre-main sequence stars in NGC 7129. We define a sample of young stellar objects based on color-color diagrams composed from IR photometry between 1.6 and 8um, from 2MASS and Spitzer, and based on X-ray detected sources from a Chandra observation. A 22ks long Chandra observation targeting the Herbig star SVS 12 was carried out on Mar 11, 2006 (start of observation UT 14h29m18s). (5 data files).

  15. Searching for δ Scuti-type pulsation and characterising northern pre-main-sequence field stars

    NASA Astrophysics Data System (ADS)

    Díaz-Fraile, D.; Rodríguez, E.; Amado, P. J.

    2014-08-01

    Context. Pre-main-sequence (PMS) stars are objects evolving from the birthline to the zero-age main sequence (ZAMS). Given a mass range near the ZAMS, the temperatures and luminosities of PMS and main-sequence stars are very similar. Moreover, their evolutionary tracks intersect one another causing some ambiguity in the determination of their evolutionary status. In this context, the detection and study of pulsations in PMS stars is crucial for differentiating between both types of stars by obtaining information of their interiors via asteroseismic techniques. Aims: A photometric variability study of a sample of northern field stars, which previously classified as either PMS or Herbig Ae/Be objects, has been undertaken with the purpose of detecting δ Scuti-type pulsations. Determination of physical parameters for these stars has also been carried out to locate them on the Hertzsprung-Russell diagram and check the instability strip for this type of pulsators. Methods: Multichannel photomultiplier and CCD time series photometry in the uvby Strömgren and BVI Johnson bands were obtained during four consecutive years from 2007 to 2010. The light curves have been analysed, and a variability criterion has been established. Among the objects classified as variable stars, we have selected those which present periodicities above 4 d-1, which was established as the lowest limit for δ Scuti-type pulsations in this investigation. Finally, these variable stars have been placed in a colour-magnitude diagram using the physical parameters derived with the collected uvbyβ Strömgren-Crawford photometry. Results: Five PMS δ Scuti- and three probable β Cephei-type stars have been detected. Two additional PMS δ Scuti stars are also confirmed in this work. Moreover, three new δ Scuti- and two γ Doradus-type stars have been detected among the main-sequence objects used as comparison or check stars.

  16. The Main Sequence of Explosive Solar Active Regions: Comparison of Emerging and Mature Active Regions

    NASA Technical Reports Server (NTRS)

    Falconer, David; Moore, Ron

    2011-01-01

    For mature active regions, an active region s magnetic flux content determines the maximum free energy the active region can have. Most Large flares and CMEs occur in active regions that are near their free-energy limit. Active-region flare power radiated in the GOES 1-8 band increases steeply as the free-energy limit is approached. We infer that the free-energy limit is set by the rate of release of an active region s free magnetic energy by flares, CMEs and coronal heating balancing the maximum rate the Sun can put free energy into the active region s magnetic field. This balance of maximum power results in explosive active regions residing in a "mainsequence" in active-region (flux content, free energy content) phase space, which sequence is analogous to the main sequence of hydrogen-burning stars in (mass, luminosity) phase space.

  17. The Star Formation Main Sequence in the Hubble Space Telescope Frontier Fields

    NASA Astrophysics Data System (ADS)

    Santini, Paola; Fontana, Adriano; Castellano, Marco; Di Criscienzo, Marcella; Merlin, Emiliano; Amorin, Ricardo; Cullen, Fergus; Daddi, Emanuele; Dickinson, Mark; Dunlop, James S.; Grazian, Andrea; Lamastra, Alessandra; McLure, Ross J.; Michałowski, Michał. J.; Pentericci, Laura; Shu, Xinwen

    2017-09-01

    We investigate the relation between star formation rate (SFR) and stellar mass (M), I.e., the main sequence (MS) relation of star-forming galaxies, at 1.3≤slant z< 6 in the first four Hubble Space Telescope (HST) Frontier Fields, on the basis of rest-frame UV observations. Gravitational lensing combined with deep HST observations allows us to extend the analysis of the MS down to {log} M/{M}⊙ ˜ 7.5 at z≲ 4 and {log} M/{M}⊙ ˜ 8 at higher redshifts, a factor of ˜10 below most previous results. We perform an accurate simulation to take into account the effect of observational uncertainties and correct for the Eddington bias. This step allows us to reliably measure the MS and in particular its slope. While the normalization increases with redshift, we fit an unevolving and approximately linear slope. We nicely extend to lower masses the results of brighter surveys. Thanks to the large dynamic range in mass and by making use of the simulation, we analyzed any possible mass dependence of the dispersion around the MS. We find tentative evidence that the scatter decreases with increasing mass, suggesting a larger variety of star formation histories in low-mass galaxies. This trend agrees with theoretical predictions and is explained as either a consequence of the smaller number of progenitors of low-mass galaxies in a hierarchical scenario and/or of the efficient but intermittent stellar feedback processes in low-mass halos. Finally, we observe an increase in the SFR per unit stellar mass with redshift milder than predicted by theoretical models, implying a still incomplete understanding of the processes responsible for galaxy growth.

  18. Acne at The Bottom Of The Main Sequence

    NASA Astrophysics Data System (ADS)

    Barnes, John; Haswell, C.; Jenkins, J.; Jeffers, S.; Jones, H. R. A.; Lohr, M.; Pavlenko, Y.

    2016-08-01

    Starspots are an important manifestation of stellar activity and yet their distribution patterns on the lowest mass stars is not well known. Time series spectra of fully convective M dwarfs taken in the red-optical with UVES reveal numerous line profile distortions which are interpreted as starspots. We derive Doppler images for four M4.5V - M9V stars and find that contrast ratios corresponding to photosphere-spot temperature differences of only 200-300 K are sufficient to model the timeseries spectra. Although more starspot structure is found at high latitudes, spots are reconstructed at a range of phases and latitudes with mean spot filling factors of only a few per cent. The occurrence of low-contrast spots at predominantly high latitudes is in general likely to be responsible for the low amplitude photometric variability seen in late-M dwarfs. The recovered starspot patterns are used to assess their effect on precision radial velocity surveys aimed at detecting planets around this population of stars.

  19. 2-dimensional models of rapidly rotating stars I. Uniformly rotating zero age main sequence stars

    NASA Astrophysics Data System (ADS)

    Roxburgh, I. W.

    2004-12-01

    We present results for 2-dimensional models of rapidly rotating main sequence stars for the case where the angular velocity Ω is constant throughout the star. The algorithm used solves for the structure on equipotential surfaces and iteratively updates the total potential, solving Poisson's equation by Legendre polynomial decomposition; the algorithm can readily be extended to include rotation constant on cylinders. We show that this only requires a small number of Legendre polynomials to accurately represent the solution. We present results for models of homogeneous zero age main sequence stars of mass 1, 2, 5, 10 M⊙ with a range of angular velocities up to break up. The models have a composition X=0.70, Z=0.02 and were computed using the OPAL equation of state and OPAL/Alexander opacities, and a mixing length model of convection modified to include the effect of rotation. The models all show a decrease in luminosity L and polar radius Rp with increasing angular velocity, the magnitude of the decrease varying with mass but of the order of a few percent for rapid rotation, and an increase in equatorial radius Re. Due to the contribution of the gravitational multipole moments the parameter Ω2 Re3/GM can exceed unity in very rapidly rotating stars and Re/Rp can exceed 1.5.

  20. New Insights into the Formation of the Blue Main Sequence in NGC 1850

    NASA Astrophysics Data System (ADS)

    Yang, Yujiao; Li, Chengyuan; Deng, Licai; de Grijs, Richard; Milone, Antonino P.

    2018-06-01

    Recent discoveries of bimodal main sequences (MSs) associated with young clusters (with ages ≲1 Gyr) in the Magellanic Clouds have drawn a lot of attention. One of the prevailing formation scenarios attributes these split MSs to a bimodal distribution in stellar rotation rates, with most stars belonging to a rapidly rotating population. In this scenario, only a small fraction of stars populating a secondary blue sequence are slowly or non-rotating stars. Here, we focus on the blue MS in the young cluster NGC 1850. We compare the cumulative number fraction of the observed blue-MS stars to that of the high-mass-ratio binary systems at different radii. The cumulative distributions of both populations exhibit a clear anti-correlation, characterized by a highly significant Pearson coefficient of ‑0.97. Our observations are consistent with the possibility that blue-MS stars are low-mass-ratio binaries, and therefore their dynamical disruption is still ongoing. High-mass-ratio binaries, on the other hand, are more centrally concentrated.

  1. Winds in hot main-sequence stars near the static limit

    NASA Technical Reports Server (NTRS)

    Morrison, Nancy D.

    1995-01-01

    This project began with the acquisition of short-wavelength, high-dispersion IUE spectra of selected late O- and early B-type stars that are near the main sequence in open clusters and associations. The profiles of the resonance lines of N(V), Si(IV), and C(IV) were studied, and we found that the C(IV) lines are the most sensitive indicators of mass loss (stellar winds) in stars of this type. The mass loss manifests itself as an extension of the short-wavelength absorption wing of the doublet, while there is no P Cygni-type emission on the long-wavelength side of the line profile. We investigated whether the short-wavelength extension could be caused by blended lines of other ionic species formed in the photosphere. Although blending is present and introduces uncertainty into the estimation of the precise location on the main sequence of the onset of the mass-loss signature, it is a crucial issue only in a few marginal cases. Mass loss certainly overwhelms blending in its influence on the spectrum between spectral types B0 and B1 (effective temperatures in the range 25,000-27,000 K). We defined a parameter called P(sub w), to describe the degree of asymmetry of the C(IV) resonance-line profile, and we studied the dependence of this parameter on the fundamental stellar parameters. For this purpose, we derived new estimates of the stellar T(eff) and log g from a non-LTE, line-blanketed model-atmosphere analysis of these stars (Grigsby, Morrison, and Anderson 1992). In order to estimate the stellar luminosities, we performed an exhaustive search of the literature for the most reliable available estimates of the distances of the clusters and associations to which the program stars belong. The dependence of P(sub w) on stellar temperature and luminosity is also studied.

  2. ORBITS, MASSES, AND EVOLUTION OF MAIN BELT TRIPLE (87) SYLVIA

    SciTech Connect

    Fang, Julia; Margot, Jean-Luc; Rojo, Patricio

    Sylvia is a triple asteroid system located in the main belt. We report new adaptive optics observations of this system that extend the baseline of existing astrometric observations to a decade. We present the first fully dynamical three-body model for this system by fitting to all available astrometric measurements. This model simultaneously fits for individual masses, orbits, and primary oblateness. We find that Sylvia is composed of a dominant central mass surrounded by two satellites orbiting at 706.5 {+-} 2.5 km and 1357 {+-} 4.0 km, i.e., about 5 and nearly 10 primary radii. We derive individual masses of 1.484{supmore » +0.016}{sub -0.014} Multiplication-Sign 10{sup 19} kg for the primary (corresponding to a density of 1.29 {+-} 0.39 g cm{sup -3}), 7.33{sup +4.7}{sub -2.3} Multiplication-Sign 10{sup 14} kg for the inner satellite, and 9.32{sup +20.7}{sub -8.3} Multiplication-Sign 10{sup 14} kg for the outer satellite. The oblateness of the primary induces substantial precession and the J{sub 2} value can be constrained to the range of 0.0985-0.1. The orbits of the satellites are relatively circular with eccentricities less than 0.04. The spin axis of the primary body and the orbital poles of both satellites are all aligned within about 2 deg of each other, indicating a nearly coplanar configuration and suggestive of satellite formation in or near the equatorial plane of the primary. We also investigate the past orbital evolution of the system by simulating the effects of a recent passage through 3:1 mean-motion eccentricity-type resonances. In some scenarios this allow us to place constraints on interior structure and past eccentricities.« less

  3. Water Masses and Nutrient Sources to the Gulf of Maine

    PubMed Central

    Townsend, David W.; Pettigrew, Neal R.; Thomas, Maura A.; Neary, Mark G.; McGillicuddy, Dennis J.; O’Donnell, James

    2016-01-01

    The Gulf of Maine, a semi-enclosed basin on the continental shelf of the northwest Atlantic Ocean, is fed by surface and deep water flows from outside the Gulf: Scotian Shelf Water from the Nova Scotian shelf that enters the Gulf at the surface, and Slope Water that enters at depth and along the bottom through the Northeast Channel. There are two types of Slope Water, Labrador Slope Water (LSW) and Warm Slope Water (WSW); it is these deep water masses that are the major source of dissolved inorganic nutrients to the Gulf. It has been known for some time that the volume inflow of Slope Waters of either type that enters the Gulf of Maine is variable, that it co-varies with the magnitude of inflowing Scotian Shelf Water, and that periods of greater inflows of Scotian Shelf Water have become more frequent in recent years, accompanied by reduced Slope Water inflows. We present here analyses of a ten-year record of data collected by moored sensors in Jordan Basin, in the interior Gulf of Maine, and in the Northeast Channel, along with recent and historical hydrographic and nutrient data, that help reveal the nature of Scotian Shelf Water and Slope Water inflows. Proportional inflows of nutrient-rich Slope Waters and nutrient-poor Scotian Shelf Waters alternate episodically with one another on time scales of months to several years, creating a variable nutrient field upon which the biological productivities of the Gulf of Maine and Georges Bank depend. Unlike decades past, the inflows of Slope Waters of either type do not appear to be correlated with the North Atlantic Oscillation, which had been shown earlier to influence the relative proportions of the two Slope Waters, WSW and LSW, that enter the Gulf. We suggest that of greater importance in recent years are more frequent, episodic influxes of colder, fresher, less dense, and low-nutrient Scotian Shelf Water into the Gulf of Maine, and concomitant reductions in the inflow of deep, nutrient-rich Slope Waters. We also

  4. Water Masses and Nutrient Sources to the Gulf of Maine.

    PubMed

    Townsend, David W; Pettigrew, Neal R; Thomas, Maura A; Neary, Mark G; McGillicuddy, Dennis J; O'Donnell, James

    2015-01-01

    The Gulf of Maine, a semi-enclosed basin on the continental shelf of the northwest Atlantic Ocean, is fed by surface and deep water flows from outside the Gulf: Scotian Shelf Water from the Nova Scotian shelf that enters the Gulf at the surface, and Slope Water that enters at depth and along the bottom through the Northeast Channel. There are two types of Slope Water, Labrador Slope Water (LSW) and Warm Slope Water (WSW); it is these deep water masses that are the major source of dissolved inorganic nutrients to the Gulf. It has been known for some time that the volume inflow of Slope Waters of either type that enters the Gulf of Maine is variable, that it co-varies with the magnitude of inflowing Scotian Shelf Water, and that periods of greater inflows of Scotian Shelf Water have become more frequent in recent years, accompanied by reduced Slope Water inflows. We present here analyses of a ten-year record of data collected by moored sensors in Jordan Basin, in the interior Gulf of Maine, and in the Northeast Channel, along with recent and historical hydrographic and nutrient data, that help reveal the nature of Scotian Shelf Water and Slope Water inflows. Proportional inflows of nutrient-rich Slope Waters and nutrient-poor Scotian Shelf Waters alternate episodically with one another on time scales of months to several years, creating a variable nutrient field upon which the biological productivities of the Gulf of Maine and Georges Bank depend. Unlike decades past, the inflows of Slope Waters of either type do not appear to be correlated with the North Atlantic Oscillation, which had been shown earlier to influence the relative proportions of the two Slope Waters, WSW and LSW, that enter the Gulf. We suggest that of greater importance in recent years are more frequent, episodic influxes of colder, fresher, less dense, and low-nutrient Scotian Shelf Water into the Gulf of Maine, and concomitant reductions in the inflow of deep, nutrient-rich Slope Waters. We also

  5. Main-Sequence CMEs as Magnetic Explosions: Compatibility with Observed Kinematics

    NASA Technical Reports Server (NTRS)

    Moore, Ron; Falconer, David; Sterling, Alphonse

    2004-01-01

    We examine the kinematics of 26 CMEs of the morphological main sequence of CMEs, those having the classic three-part bubble structure of (1) a bright front eveloping (2) a dark cavity within which rides (3) a bright blob/filamentary feature. Each CME is observed in Yohkoh/SXT images to originate from near the limb (> or equal to 0.7 R(sub Sun) from disk center). The basic data (from the SOHO LASCO CME Catalog) for the kinematics of each CME are the sequence of LASCO images of the CME, the time of each image, the measured radial distance of the front edge of the CME in each image, and the measured angular extent of the CME. About half of our CMEs (12) occur with a flare, and the rest (14) occur without a flare. While the average linear-fit speed of the flare CMEs (1000 km/s) is twice that of the non-flare CMEs (510 km/s), the flare CMEs and the non-flare CMEs are similar in that some have nearly flat velocity-height (radial extent) profiles (little acceleration), some have noticeably falling velocity profiles (noticeable deceleration), and the rest have velocity profiles that rise considerably through the outer corona (blatant acceleration). This suggests that in addition to sharing similar morphology, main-sequence CMEs all have basically the same driving mechanism. The observed radial progression of each of our 26 CMEs is fit by a simple model magnetic plasmoid that is in pressure balance with the radial magnetic field in the outer corona and that propels itself outward by magnetic expansion, doing no net work on its surroundings. On average over the 26 CMEs, this model fits the observations as well as the assumption of constant acceleration. This is compatible with main-sequence CMEs being magnetically driven, basically magnetic explosions, with the velocity profile in the outer corona being largely dictated by the initial Alfien speed in the CME (when the front is at approx. 3 (sub Sun), analogous to the mass of a main-sequence star dictating the luminosity.

  6. A Search for Planets and Brown Dwarfs around Post Main Sequence Stars

    NASA Astrophysics Data System (ADS)

    Otani, Tomomi; Oswalt, Terry D.

    2016-06-01

    The most promising current theory for the origin of subdwarf B (sdB) stars is that they were formed during binary star evolution. This project was conducted to test this hypothesis by searching for companions around six sdB pulsators using the Observed-minus-Calculated (O-C) method. A star’s position in space will wobble due to the gravitational forces of any companion. If it is emitting a periodic signal, the orbital motion of the star around the system’s center of mass causes periodic changes in the light pulse arrival times. O-C diagrams for six sdB pulsators were constructed from several years’ observations, providing useful limits on suspected companions’ minimum masses and semimajor axes. The results were constrained by “period vs. amplitude” and “mass vs. semimajor axis” models to quantify companion masses and semimajor axes that are consistent with the observational data, if any. Two of our targets, V391 Peg and HS0702+6043, are noted in previous publications to have substellar companions. These were used to validate the method used in this research. The results of this study yielded the same masses and semimajor axes for these two stars as the published values, within the uncertainties. Another of the targets, EC20117-4014, is noted in the literature as a binary system containing an sdB and F5V star, however the orbital period and separation were unknown. The new data obtained in this study contain the signal of a companion candidate with a period of 158.01 days. Several possible mass and semimajor axis combinations for the companion are consistent with the observations. One of the other targets in this study displayed preliminary evidence for a companion that will require further observation. Though still a small sample, these results suggest that planets often survive the post-main-sequence evolution of their parent stars.

  7. ESTIMATING THE RADIUS OF THE CONVECTIVE CORE OF MAIN-SEQUENCE STARS FROM OBSERVED OSCILLATION FREQUENCIES

    SciTech Connect

    Yang, Wuming, E-mail: yangwuming@bnu.edu.cn, E-mail: yangwuming@ynao.ac.cn

    The determination of the size of the convective core of main-sequence stars is usually dependent on the construction of models of stars. Here we introduce a method to estimate the radius of the convective core of main-sequence stars with masses between about 1.1 and 1.5 M {sub ⊙} from observed frequencies of low-degree p -modes. A formula is proposed to achieve the estimation. The values of the radius of the convective core of four known stars are successfully estimated by the formula. The radius of the convective core of KIC 9812850 estimated by the formula is 0.140 ± 0.028 Rmore » {sub ⊙}. In order to confirm this prediction, a grid of evolutionary models was computed. The value of the convective-core radius of the best-fit model of KIC 9812850 is 0.149 R {sub ⊙}, which is in good agreement with that estimated by the formula from observed frequencies. The formula aids in understanding the interior structure of stars directly from observed frequencies. The understanding is not dependent on the construction of models.« less

  8. Domains of pulsational instability of low-frequency modes in rotating upper main sequence stars

    NASA Astrophysics Data System (ADS)

    Szewczuk, Wojciech; Daszyńska-Daszkiewicz, Jadwiga

    2017-07-01

    We determine instability domains on the Hertzsprung-Russell diagram for rotating main sequence stars with masses of 2-20 M⊙. The effects of the Coriolis force are treated wihin the traditional approximation. High-order g modes with harmonic degrees ℓ up to 4 and mixed gravity-Rossby modes with |m| up to 4 are considered. We include the effects of rotation in wider instability strips for a given ℓ compared to the non-rotating case and in an extension of the pulsational instability to hotter and more massive models. We present results for a fixed value of the initial rotation velocity as well as for a fixed ratio of the angular rotation frequency to its critical value. Moreover, we check how the initial hydrogen abundance, metallicity, overshooting from the convective core and opacity affect the pulsational instability domains. The effect of rotation on the period spacing is also discussed.

  9. Making Sense of Atmospheric Models and Fundamental Stellar Properties at the Bottom of the Main Sequence

    NASA Astrophysics Data System (ADS)

    Dieterich, Sergio; Henry, Todd; Jao, W.-C.; Washington, Robert; Silverstein, Michele; Winters, J.; RECONS

    2018-01-01

    We present a detailed comparison of atmospheric model predictions and photometric observations for late M and L dwarfs. We discuss which wavelength regions are best for determining the fundamental properties of these cool stellar and substellar atmospheres and use this analysis to refine the HR diagram for the hydrogen burning limit first presented in 2014. We also add several new objects to the HR diagram and find little qualitative difference in the HR diagram's overall morphology when compared to our 2014 results. The L2 dwarf 2MASS 0523-1403 remains the smallest hydrogen burning star for which we calculated a radius, thus likely indicating the end of the stellar main sequence. This work is supported by the NSF Astronomy and Astrophysics Postdoctoral Fellowship program through grant AST-1400680.

  10. A Population Study of Wide-Separation Brown Dwarf Companions to Main Sequence Stars

    NASA Technical Reports Server (NTRS)

    Smith, Jeffrey J.

    2005-01-01

    Increased interest in infrared astronomy has opened the frontier to study cooler objects that shed significant light on the formation of planetary systems. Brown dwarf research provides a wealth of information useful for sorting through a myriad of proposed formation theories. Our study combines observational data from 2MASS with rigorous computer simulations to estimate the true population of long-range (greater than 1000 AU) brown dwarf companions in the solar neighborhood (less than 25 pc from Earth). Expanding on Gizis et al. (2001), we have found the margin of error in previous estimates to be significantly underestimated after we included orbit eccentricity, longitude of pericenter, angle of inclination, field star density, and primary and secondary luminosities as parameters influencing the companion systems in observational studies. We apply our simulation results to current L- and T-dwarf catalogs to provide updated estimates on the frequency of wide-separation brown dwarf companions to main sequence stars.

  11. Pre-main-sequence stars in the young cluster IC 2391

    NASA Technical Reports Server (NTRS)

    Stauffer, John; Hartmann, Lee W.; Jones, Burton F.; Mcnamara, Brian R.

    1989-01-01

    Seven or eight new, late-type members of the poor open cluster IC 2391 are identified, and membership is confirmed for two other stars. The new members fall approximately along a 3 x 10 to the 7th yr isochrone, which is the age estimated for the cluster on the basis of it super main-seqence turnoff. Echelle spectra were obtained for the most probable cluster members. Most show H-alpha in emission and a strong Li 6707 A absorption line, and a few are rapid rotators. The Li abundances for cluster stars cooler than the sun are considerably less than the primordial Li abundance, providing the first direct evidence for substantial premain-sequence Li burning. The rotational velocities show a range from about 15 to 150 km/s, with a distribution of rotational velocities not significantly different from that observed for low-mass stars in the Pleiades.

  12. THE DISCOVERY OF SOLAR-LIKE ACTIVITY CYCLES BEYOND THE END OF THE MAIN SEQUENCE?

    SciTech Connect

    Route, Matthew, E-mail: mroute@purdue.edu

    2016-10-20

    The long-term magnetic behavior of objects near the cooler end of the stellar main sequence is poorly understood. Most theoretical work on the generation of magnetism in these ultracool dwarfs (spectral type ≥M7 stars and brown dwarfs) suggests that their magnetic fields should not change in strength and direction. Using polarized radio emission measurements of their magnetic field orientations, I demonstrate that these cool, low-mass, fully convective objects appear to undergo magnetic polarity reversals analogous to those that occur on the Sun. This powerful new technique potentially indicates that the patterns of magnetic activity displayed by the Sun continue tomore » exist, despite the fully convective interiors of these objects, in contravention of several leading theories of the generation of magnetic fields by internal dynamos.« less

  13. The Search for Pre-Main Sequence Eclipsing Binary Stars in the Lagoon Nebula

    NASA Astrophysics Data System (ADS)

    Henderson, Calen B.; Stassun, K. G.

    2009-01-01

    We report time-series CCD I-band photometry for the pre-main-sequence cluster NGC 6530, located within the Lagoon Nebula. The data were obtained with the 4Kx4K imager on the SMARTS 1.0m telescope at CTIO on 36 nights over the summers of 2005 and 2006. In total we have light curves for 50,000 stars in an area 1 deg2, with a sampling cadence of 1 hour. The stars in our sample have masses in the range 0.25-4.0 Msun, assuming a distance of 1.25 kpc to the cluster. Our goals are to look for stars with rotation periods and to identify eclipsing binary candidates. Here we present light curves of photometrically variable stars and potential eclipsing binary star systems. This work has been supported by the National Science Foundation under Career grant AST-0349075.

  14. Fundamental Parameters of Main-Sequence Stars in an Instant with Machine Learning

    NASA Astrophysics Data System (ADS)

    Bellinger, Earl P.; Angelou, George C.; Hekker, Saskia; Basu, Sarbani; Ball, Warrick H.; Guggenberger, Elisabeth

    2016-10-01

    Owing to the remarkable photometric precision of space observatories like Kepler, stellar and planetary systems beyond our own are now being characterized en masse for the first time. These characterizations are pivotal for endeavors such as searching for Earth-like planets and solar twins, understanding the mechanisms that govern stellar evolution, and tracing the dynamics of our Galaxy. The volume of data that is becoming available, however, brings with it the need to process this information accurately and rapidly. While existing methods can constrain fundamental stellar parameters such as ages, masses, and radii from these observations, they require substantial computational effort to do so. We develop a method based on machine learning for rapidly estimating fundamental parameters of main-sequence solar-like stars from classical and asteroseismic observations. We first demonstrate this method on a hare-and-hound exercise and then apply it to the Sun, 16 Cyg A and B, and 34 planet-hosting candidates that have been observed by the Kepler spacecraft. We find that our estimates and their associated uncertainties are comparable to the results of other methods, but with the additional benefit of being able to explore many more stellar parameters while using much less computation time. We furthermore use this method to present evidence for an empirical diffusion-mass relation. Our method is open source and freely available for the community to use.6

  15. Hubble Tarantula Treasury Project - VI. Identification of Pre-Main-Sequence Stars using Machine Learning techniques

    NASA Astrophysics Data System (ADS)

    Ksoll, Victor F.; Gouliermis, Dimitrios A.; Klessen, Ralf S.; Grebel, Eva K.; Sabbi, Elena; Anderson, Jay; Lennon, Daniel J.; Cignoni, Michele; de Marchi, Guido; Smith, Linda J.; Tosi, Monica; van der Marel, Roeland P.

    2018-05-01

    The Hubble Tarantula Treasury Project (HTTP) has provided an unprecedented photometric coverage of the entire star-burst region of 30 Doradus down to the half Solar mass limit. We use the deep stellar catalogue of HTTP to identify all the pre-main-sequence (PMS) stars of the region, i.e., stars that have not started their lives on the main-sequence yet. The photometric distinction of these stars from the more evolved populations is not a trivial task due to several factors that alter their colour-magnitude diagram positions. The identification of PMS stars requires, thus, sophisticated statistical methods. We employ Machine Learning Classification techniques on the HTTP survey of more than 800,000 sources to identify the PMS stellar content of the observed field. Our methodology consists of 1) carefully selecting the most probable low-mass PMS stellar population of the star-forming cluster NGC2070, 2) using this sample to train classification algorithms to build a predictive model for PMS stars, and 3) applying this model in order to identify the most probable PMS content across the entire Tarantula Nebula. We employ Decision Tree, Random Forest and Support Vector Machine classifiers to categorise the stars as PMS and Non-PMS. The Random Forest and Support Vector Machine provided the most accurate models, predicting about 20,000 sources with a candidateship probability higher than 50 percent, and almost 10,000 PMS candidates with a probability higher than 95 percent. This is the richest and most accurate photometric catalogue of extragalactic PMS candidates across the extent of a whole star-forming complex.

  16. The Star-Forming Main Sequence as a Natural Consequence of the Central Limit Theorem

    NASA Astrophysics Data System (ADS)

    Kelson, Daniel David

    2015-08-01

    Star-formation rates (SFR) of disk galaxies correlate with stellar mass, with a small dispersion in SSFR at fixed mass, sigma~0.3 dex. With such scatter this star-formation main sequence (SFMS) has been interpreted as deterministic and fundamental. Here I demonstrate that such a correlation arises naturally from the central limit theorem. The derivation begins by approximating in situ stellar mass growth as a stochastic process, much like a random walk, where the expectation of SFR at any time is equal to the SFR at the previous time. The SFRs of real galaxies, however, do not experience wholly random stochastic changes over time, but change in a highly correlated fashion due to the long reach of gravity and the correlation of structure in the universe. We therefore generalize the results for star-formation as a stochastic process that has random correlations over random and potentially infinite timescales. For unbiased samples of (disk) galaxies we derive expectation values for SSFR and its scatter, such that =2/T, and Sig[SFR/M]=. Note that this relative scatter is independent of mass and time. This derived correlation between SFR and stellar mass, and its evolution, matches published data to z=10 with sufficient accuracy to constrain cosmological parameters from the data. This statistical approach to the diversity of star-formation histories reproduces several important observables, including: the scatter in SSFR at fixed mass; the forms of SFHs of nearby dwarf galaxies and the Milky Way. At least one additional process beyond a single one responsible for in situ stellar mass growth will be required to match the evolution of the stellar mass function, and we discuss ways to generalize the framework. The implied dispersion in SFHs, and the SFMS's insensitivity to timescales of stochasticity, thus substantially limits the ability to connect massive galaxies to their progenitors over long cosmic baselines. Such analytical work shows promise for

  17. The physical driver of the optical Eigenvector 1 in Quasar Main Sequence

    NASA Astrophysics Data System (ADS)

    Panda, Swayamtrupta; Czerny, Bożena; Wildy, Conor

    2017-11-01

    Quasars are complex sources, characterized by broad band spectra from radio through optical to X-ray band, with numerous emission and absorption features. This complexity leads to rich diagnostics. However, tet{bg92} used Principal Component Analysis (PCA), and with this analysis they were able to show significant correlations between the measured parameters. The leading component, related to Eigenvector 1 (EV1) was dominated by the anticorrelation between the Fe II optical emission and [OIII] line and EV1 alone contained 30% of the total variance. It opened a way in defining a quasar main sequence, in close analogy to the stellar main sequence on the Hertzsprung-Russel (HR) diagram ( tealt{sul01}). The question still remains which of the basic theoretically motivated parameters of an active nucleus (Eddington ratio, black hole mass, accretion rate, spin, and viewing angle) is the main driver behind the EV1. Here we limit ourselves to the optical waveband, and concentrate on theoretical modelling the Fe II to Hβ ratio, and we test the hypothesis that the physical driver of EV1 is the maximum of the accretion disk temperature, reflected in the shape of the spectral energy distribution (SED). We performed computations of the Hβ and optical Fe II for a broad range of SED peak position using CLOUDY photoionisation code. We assumed that both Hβ and Fe II emission come from the Broad Line Region represented as a constant density cloud in a plane-parallel geometry. We expected that a hotter disk continuum will lead to more efficient production of Fe II but our computations show that the Fe II to Hβ ratio actually drops with the rise of the disk temperature. Thus either hypothesis is incorrect, or approximations used in our paper for the description of the line emissivity is inadequate.

  18. Spectroscopic and asteroseismic analysis of the remarkable main-sequence A star KIC 11145123

    NASA Astrophysics Data System (ADS)

    Takada-Hidai, Masahide; Kurtz, Donald W.; Shibahashi, Hiromoto; Murphy, Simon J.; Takata, Masao; Saio, Hideyuki; Sekii, Takashi

    2017-10-01

    A spectroscopic analysis was carried out to clarify the properties of KIC 11145123 - the first main-sequence star with a directly measured core-to-surface rotation profile - based on spectra observed with the High Dispersion Spectrograph (HDS) of the Subaru telescope. The atmospheric parameters (Teff = 7600 K, log g = 4.2, ξ = 3.1 km s-1 and [Fe/H] = -0.71 dex), the radial and rotation velocities, and elemental abundances were obtained by analysing line strengths and fitting line profiles, which were calculated with a 1D LTE model atmosphere. The main properties of KIC 11145123 are: (1) a low [Fe/H] = -0.71 ± 0.11 dex and a high radial velocity of -135.4 ± 0.2 km s-1. These are remarkable among late-A stars. Our best asteroseismic models with this low [Fe/H] have slightly high helium abundance and low masses of 1.4 M⊙. All of these results strongly suggest that KIC 11145123 is a Population II blue straggler; (2) the projected rotation velocity confirms the asteroseismically predicted slow rotation of the star; (3) comparisons of abundance patterns between KIC 11145123 and Am, Ap, and blue stragglers show that KIC 11145123 is neither an Am star nor an Ap star, but has abundances consistent with a blue straggler. We conclude that the remarkably long 100-d rotation period of this star is a consequence of it being a blue straggler, but both pathways for the formation of blue stragglers - merger and mass loss in a binary system - pose difficulties for our understanding of the exceedingly slow rotation. In particular, we show that there is no evidence of any secondary companion star, and we put stringent limits on the possible mass of any such purported companion through the phase modulation technique.

  19. The origin of the scatter of the star forming main sequence at z=0

    NASA Astrophysics Data System (ADS)

    Shanahan, Clare; Somerville, Rachel S.; Saintonge, Amelie; Huang, Mei-Ling

    2016-01-01

    We investigate the origin of the dispersion in the relationship between star formation rate (SFR) and stellar mass, known as the star forming main sequence (SFMS). Our study includes predictions from a state-of-the-art semi-analytic model (SAM) as well as observations from the COLDGASS, Bluedisk, and GAMA surveys. Using a simple toy model we demonstrate that, in the absence of a correlation between gas fraction and galaxy size, we would expect more compact disks to live 'high' on the SFMS, and vice versa, due to the observational Kennicutt relation. We demonstrate that this correlation is not seen in the observations, nor is it predicted by the SAM. We find in both the model and the observations that extended disks have a higher fraction of their baryonic mass in total cold gas and in HI and $H_{2}$ gas separately, offsetting the dependence of SFR on disk size. We investigate the origin of the gas fraction-size correlation in the SAMs, and find that it is connected with the rate of cosmological accretion of gas from the intergalactic medium.

  20. Stellar and Circumstellar Properties of the Pre-Main-Sequence Binary GV Tau from Infrared Spectroscopy

    NASA Astrophysics Data System (ADS)

    Doppmann, Greg W.; Najita, Joan R.; Carr, John S.

    2008-09-01

    We report spatially resolved spectroscopy of both components of the low-mass pre-main-sequence binary GV Tau. High-resolution spectroscopy in the K and L bands is used to characterize the stellar properties of the binary and to explore the nature of the circumstellar environment. We find that the southern component, GV Tau S, is a radial velocity variable, possibly as a result of an unseen low-mass companion. The strong warm gaseous HCN absorption reported previously by Gibb and coworkers toward GV Tau S was not present during the epoch of our observations. Instead, we detect warm (~500 K) molecular absorption with similar properties toward the northern infrared companion, GV Tau N. At the epoch of our observations, the absorbing gas toward GV Tau N was approximately at the radial velocity of the GV Tau molecular envelope, but it was redshifted with respect to the star by ~13 km s-1. One interpretation of our results is that GV Tau N is also a binary and that most of the warm molecular absorption arises in a circumbinary disk viewed close to edge-on. Data presented herein were obtained at the W. M. Keck Observatory from telescope time allocated to the National Aeronautics and Space Administration through the agency's scientific partnership with the California Institute of Technology and the University of California. The Observatory was made possible by the generous financial support of the W. M. Keck Foundation.

  1. On The Sfr-M* Main Sequence Archetypal Star-Formation History And Analytical Models

    NASA Astrophysics Data System (ADS)

    Ciesla, Laure; Elbaz, David; Fensch, Jeremy

    2017-06-01

    From the evolution of the main sequence we can build the star formation history (SFH) of MS galaxies, assuming that they follow this relation all their life. We show that this SFH is not only a function of cosmic time but also involve the seed mass of the galaxy. We discuss the implications of this MS SFH on the stellar mass growth, and the entry in the passive region of the UVJ diagram, while the galaxy is still forming stars. We test the ability of different analytical SFH forms found in the literature to probe the SFR of all type of galaxies. Using a sample of GOODS-South galaxies, we show that these SFHs artificially enhance or create a gradient of age, parallel to the MS. A simple model of a MS galaxy, such as those expected from compaction or variation in gas accretion, undergoing some fluctuations provide does not predict such a gradient, that we show is due to SFH assumptions. We propose an improved analytical form, taking into account a flexibility in the recent SFH that we calibrate as a diagnostic to identify rapidly quenched galaxies from large photometric survey.

  2. ASTEROSEISMIC ANALYSIS OF THE PRE-MAIN-SEQUENCE STARS IN NGC 2264

    SciTech Connect

    Guenther, D. B.; Casey, M. P.; Kallinger, T.

    2009-10-20

    NGC 2264 is a young open cluster lying above the Galactic plane in which six variable stars have previously been identified as possible pre-main-sequence (PMS) pulsators. Their oscillation spectra are relatively sparse with each star having from 2 to 12 unambiguous frequency identifications based on Microvariability and Oscillations of Stars satellite and multi-site ground-based photometry. We describe our efforts to find classical PMS stellar models (i.e., models evolved from the Hayashi track) whose oscillation spectra match the observed frequencies. We find model eigenspectra that match the observed frequencies and are consistent with the stars' locations in the HR diagram formore » the three faintest of the six stars. Not all the frequencies found in spectra of the three brightest stars can be matched to classical PMS model spectra possibly because of effects not included in our PMS models such as chemical and angular momentum stratification in the outer layers of the star. All the oscillation spectra contain both radial and nonradial p-modes. We argue that the PMS pulsating stars divide into two groups depending on whether or not they have undergone complete mixing (i.e., have gone through a Hayashi phase). Lower mass stars that do evolve through a Hayashi phase have oscillation spectra predicted by classical PMS models, whereas more massive stars that do not, retain mass infall effects in their surface layers and are not well modeled by classical PMS models.« less

  3. Evolution Models of Helium White Dwarf–Main-sequence Star Merger Remnants

    SciTech Connect

    Zhang, Xianfei; Bi, Shaolan; Hall, Philip D.

    It is predicted that orbital decay by gravitational-wave radiation and tidal interaction will cause some close binary stars to merge within a Hubble time. The merger of a helium-core white dwarf with a main-sequence (MS) star can produce a red giant branch star that has a low-mass hydrogen envelope when helium is ignited and thus become a hot subdwarf. Because detailed calculations have not been made, we compute post-merger models with a stellar evolution code. We find the evolutionary paths available to merger remnants and find the pre-merger conditions that lead to the formation of hot subdwarfs. We find thatmore » some such mergers result in the formation of stars with intermediate helium-rich surfaces. These stars later develop helium-poor surfaces owing to diffusion. Combining our results with a model population and comparing to observed stars, we find that some observed intermediate helium-rich hot subdwarfs can be explained as the remnants of the mergers of helium-core white dwarfs with low-mass MS stars.« less

  4. Laser mass spectrometry for DNA sequencing, disease diagnosis, and fingerprinting

    NASA Astrophysics Data System (ADS)

    Chen, C. H. Winston; Taranenko, N. I.; Zhu, Y. F.; Chung, C. N.; Allman, S. L.

    1997-05-01

    Since laser mass spectrometry has the potential for achieving very fast DNA analysis, we recently applied it to DNA sequencing, DNA typing for fingerprinting, and DNA screening for disease diagnosis. Two different approaches for sequencing DNA have been successfully demonstrated. One is to sequence DNA with DNA ladders produced from Sanger's enzymatic method. The other is to do direct sequencing without DNA ladders. The need for quick DNA typing for identification purposes is critical for forensic application. Our preliminary results indicate laser mass spectrometry can possible be used for rapid DNA fingerprinting applications at a much lower cost than gel electrophoresis. Population screening for certain genetic disease can be a very efficient step to reducing medical costs through prevention. Since laser mass spectrometry can provide very fast DNA analysis, we applied laser mass spectrometry to disease diagnosis. Clinical samples with both base deletion and point mutation have been tested with complete success.

  5. AN OBJECTIVE DEFINITION FOR THE MAIN SEQUENCE OF STAR-FORMING GALAXIES

    SciTech Connect

    Renzini, Alvio; Peng, Ying-jie, E-mail: alvio.renzini@oapd.inaf.it, E-mail: y.peng@mrao.cam.ac.uk

    The main sequence (MS) of star-forming (SF) galaxies plays a fundamental role in driving galaxy evolution and our efforts to understand it. However, different studies find significant differences in the normalization, slope, and shape of the MS. These discrepancies arise mainly from the different selection criteria adopted to isolate SF galaxies, which may include or exclude galaxies with a specific star formation rate (SFR) substantially below the MS value. To obviate this limitation of all current criteria, we propose an objective definition of the MS that does not rely at all on a pre-selection of SF galaxies. Constructing the 3Dmore » SFR–mass–number plot, the MS is then defined as the ridge line of the SF peak, as illustrated with various figures. The advantages of such a definition are manifold. If generally adopted, it will facilitate the inter-comparison of results from different groups using the same SFR and stellar mass diagnostics, or it will highlight the relative systematics of different diagnostics. All of this could help to understand MS galaxies as systems in a quasi-steady state equilibrium and would also provide a more objective criterion for identifying quenching galaxies.« less

  6. Did A Planet Survive A Post-Main Sequence Evolutionary Event?

    NASA Astrophysics Data System (ADS)

    Sorber, Rebecca; Jang-Condell, Hannah; Zimmerman, Mara

    2018-06-01

    The GL86 is star system approximately 10 pc away with a main sequence K- type ~ 0.77 M⊙ star (GL 86A) with a white dwarf ~0.49 M⊙ companion (GL86 B). The system has a ~ 18.4 AU semi-major axis, an orbital period of ~353 yrs, and an eccentricity of ~ 0.39. A 4.5 MJ planet orbits the main sequence star with a semi-major axis of 0.113 AU, an orbital period of 15.76 days, in a near circular orbit with an eccentricity of 0.046. If we assume that this planet was formed during the time when the white dwarf was a main sequence star, it would be difficult for the planet to have remained in a stable orbit during the post-main sequence evolution of GL86 B. The post-main sequence evolution with planet survival will be examined by modeling using the program Mercury (Chambers 1999). Using the model, we examine the origins of the planet: whether it formed before or after the post-main sequence evolution of GL86B. The modeling will give us insight into the dynamical evolution of, not only, the binary star system, but also the planet’s life cycle.

  7. THE YOUNG OPEN CLUSTERS KING 12, NGC 7788, AND NGC 7790: PRE-MAIN-SEQUENCE STARS AND EXTENDED STELLAR HALOS

    SciTech Connect

    Davidge, T. J.

    2012-12-20

    The stellar contents of the open clusters King 12, NGC 7788, and NGC 7790 are investigated using MegaCam images. Comparisons with isochrones yield an age <20 Myr for King 12, 20-40 Myr for NGC 7788, and 60-80 Myr for NGC 7790 based on the properties of stars near the main-sequence turnoff (MSTO) in each cluster. The reddening of NGC 7788 is much larger than previously estimated. The luminosity functions (LFs) of King 12 and NGC 7788 show breaks that are attributed to the onset of pre-main-sequence (PMS) objects, and comparisons with models of PMS evolution yield ages that are consistentmore » with those measured from stars near the MSTO. In contrast, the r' LF of main-sequence stars in NGC 7790 is matched to r' = 20 by a model that is based on the solar neighborhood mass function. The structural properties of all three clusters are investigated by examining the two-point angular correlation function of blue main-sequence stars. King 12 and NGC 7788 are each surrounded by a stellar halo that extends out to a radius of 5 arcmin ({approx}3.4 pc). It is suggested that these halos form in response to large-scale mass ejection early in the evolution of the clusters, as predicted by models. In contrast, blue main-sequence stars in NGC 7790 are traced out to a radius of {approx}7.5 arcmin ({approx}5.5 pc), with no evidence of a halo. It is suggested that all three clusters may have originated in the same star-forming complex, but not in the same giant molecular cloud.« less

  8. AN M DWARF COMPANION TO AN F-TYPE STAR IN A YOUNG MAIN-SEQUENCE BINARY

    SciTech Connect

    Eigmüller, Ph.; Csizmadia, Sz.; Erikson, A.

    2016-03-15

    Only a few well characterized very low-mass M dwarfs are known today. Our understanding of M dwarfs is vital as these are the most common stars in our solar neighborhood. We aim to characterize the properties of a rare F+dM stellar system for a better understanding of the low-mass end of the Hertzsprung–Russel diagram. We used photometric light curves and radial velocity follow-up measurements to study the binary. Spectroscopic analysis was used in combination with isochrone fitting to characterize the primary star. The primary star is an early F-type main-sequence star with a mass of (1.493 ± 0.073) M{sub ⊙}more » and a radius of (1.474 ± 0.040) R{sub ⊙}. The companion is an M dwarf with a mass of (0.188 ± 0.014) M{sub ⊙} and a radius of (0.234 ± 0.009) R{sub ⊙}. The orbital period is (1.35121 ± 0.00001) days. The secondary star is among the lowest-mass M dwarfs known to date. The binary has not reached a 1:1 spin–orbit synchronization. This indicates a young main-sequence binary with an age below ∼250 Myr. The mass–radius relation of both components are in agreement with this finding.« less

  9. Main-sequence magnetic CP stars: II. Physical parameters and chemical composition of the atmosphere

    NASA Astrophysics Data System (ADS)

    Romanyuk, I. I.

    2007-03-01

    local chemical composition including the stratification of elements. Some of the coolest SrCrEu peculiar stars are found to exhibit fast light variations with periods ranging from 6 to 15 min. These variations are unassociated with rotation, but are due to nonradial pulsations. The final part of the the review considers the fundamental parameters of CP stars. The effective temperatures, luminosities, radii, and masses of these objects are shown to agree with the corresponding physical parameters of normal main-sequence stars of the same spectral types.

  10. INTRINSIC COLORS, TEMPERATURES, AND BOLOMETRIC CORRECTIONS OF PRE-MAIN-SEQUENCE STARS

    SciTech Connect

    Pecaut, Mark J.; Mamajek, Eric E.

    2013-09-01

    We present an analysis of the intrinsic colors and temperatures of 5-30 Myr old pre-main-sequence (pre-MS) stars using the F0- through M9-type members of nearby, negligibly reddened groups: the η Cha cluster, the TW Hydra Association, the β Pic Moving Group, and the Tucana-Horologium Association. To check the consistency of spectral types from the literature, we estimate new spectral types for 52 nearby pre-MS stars with spectral types F3 through M4 using optical spectra taken with the SMARTS 1.5 m telescope. Combining these new types with published spectral types and photometry from the literature (Johnson-Cousins BVI{sub C} , 2MASS JHK{submore » S} and WISE W1, W2, W3, and W4), we derive a new empirical spectral type-color sequence for 5-30 Myr old pre-MS stars. Colors for pre-MS stars match dwarf colors for some spectral types and colors, but for other spectral types and colors, deviations can exceed 0.3 mag. We estimate effective temperatures (T {sub eff}) and bolometric corrections (BCs) for our pre-MS star sample through comparing their photometry to synthetic photometry generated using the BT-Settl grid of model atmosphere spectra. We derive a new T {sub eff} and BC scale for pre-MS stars, which should be a more appropriate match for T Tauri stars than often-adopted dwarf star scales. While our new T {sub eff} scale for pre-MS stars is within ≅100 K of dwarfs at a given spectral type for stars« less

  11. Post-main-sequence debris from rotation-induced YORP break-up of small bodies

    NASA Astrophysics Data System (ADS)

    Veras, Dimitri; Jacobson, Seth A.; Gänsicke, Boris T.

    2014-12-01

    Although discs of dust and gas have been observed orbiting white dwarfs, the origin of this circumstellar matter is uncertain. We hypothesize that the in situ break-up of small bodies such as asteroids spun to fission during the giant branch phases of stellar evolution provides an important contribution to this debris. The YORP (Yarkovsky-O'Keefe-Radviesvki-Paddock) effect, which arises from radiation pressure, accelerates the spin rate of asymmetric asteroids, which can eventually shear themselves apart. This pressure is maintained and enhanced around dying stars because the outward push of an asteroid due to stellar mass loss is insignificant compared to the resulting stellar luminosity increase. Consequently, giant star radiation will destroy nearly all bodies with radii in the range 100 m-10 km that survive their parent star's main-sequence lifetime within a distance of about 7 au; smaller bodies are spun apart to their strongest, competent components. This estimate is conservative and would increase for highly asymmetric shapes or incorporation of the inward drag due to giant star stellar wind. The resulting debris field, which could extend to thousands of au, may be perturbed by remnant planetary systems to reproduce the observed dusty and gaseous discs which accompany polluted white dwarfs.

  12. Verifying reddening and extinction for Gaia DR1 TGAS main sequence stars

    NASA Astrophysics Data System (ADS)

    Gontcharov, George A.; Mosenkov, Aleksandr V.

    2017-12-01

    We compare eight sources of reddening and extinction estimates for approximately 60 000 Gaia DR1 Tycho-Gaia Astrometric Solution (TGAS) main sequence stars younger than 3 Gyr with a relative error of the Gaia parallax less than 0.1. For the majority of the stars, the best 2D dust emission-based reddening maps show considerable differences between the reddening to infinity and the one calculated to the stellar distance using the barometric law of the dust distribution. This proves that the majority of the TGAS stars are embedded in the Galactic dust layer and a proper 3D treatment of the reddening/extinction is required to calculate their dereddened colours and absolute magnitudes reliably. Sources with 3D estimates of reddening are tested in their ability to put the stars among the PARSEC and MIST theoretical isochrones in the Hertzsprung-Russell diagram based on the precise Gaia, Tycho-2, 2MASS and WISE photometry. Only the reddening/extinction estimates by Arenou et al. and Gontcharov, being appropriate for nearby stars within 280 pc, provide both the minimal number of outliers bluer than any reasonable isochrone and the correct number of stars younger than 3 Gyr in agreement with the Besançon Galaxy model.

  13. Coronagraphic imaging of pre-main-sequence stars: Remnant evvelopes of star formation seen in reflection

    NASA Technical Reports Server (NTRS)

    Nakajima, Tadashi; Golimowski, David A.

    1995-01-01

    We have obtained R- and I-band coronagraphic images of the vicinities of 11 pre-main sequence (PMS) stars to search for faint, small-scale reflection nebulae. The inner radius of the search and the field of view are 1.9 arcsec and 1x1 arcmin, respectively. Reflection nebulae were imaged around RY Tau, T Tau,DG Tau, SU Aur, AB Aur, FU Ori, and Z CMa. No nebulae were detected around HBC 347, GG Tau, V773 Tau, and V830 Tau. Categorically speaking, most of the classical T Tauri program stars and all the FU Orionis-type program stars are associated with the reflection nebulae, while none of the weak-line T Tauri program stars are associated with nebulae. The detected nebulae range in size from 250 to 37 000 AU. From the brightness ratios of the stars and nebulae, we obtain a lower limit to the visual extinction of PMS star light through the nebulae of (A(sub V))(sub neb) = 0.1. The lower limits of masses and volume densities of the nebulae associated with the classical T Tauri stars are 10(exp-6) Solar mass and N(sub H) = 10(exp 5)/cu cm, respectively. Lower limits for the nebulae around FU Orionis stars are 10(exp -5) Solar mass and n(sub H) = 10 (exp 5)/cu cm, respectively. Some reflection nebulae may trace the illuminated surfaces of the optically thick dust nebulae, so these mass estimates are not stringent. All the PMS stars with associated nebulae are strong far-infrared emitters. Both the far-infrared emission and the reflection nebulae appear to originate from the remnant envelopes of star formation. The 100 micrometers emitting regions of SU Aur and FU Ori are likely to be cospatial with the reflection nebulae. A spatial discontinuity between FU Ori and its reflection nebula may explain the dip in the far-infrared spectral energy distribution at 60 micrometers. The warped, disk-like nebulae around T Tau and Z CMa are aligned with and embrace the inner star/circumstellar disk systems. The arc-shaped nebula around DG Tau may be in contact with the coaligned inner

  14. Tandem Mass Spectrum Sequencing: An Alternative to Database Search Engines in Shotgun Proteomics.

    PubMed

    Muth, Thilo; Rapp, Erdmann; Berven, Frode S; Barsnes, Harald; Vaudel, Marc

    2016-01-01

    Protein identification via database searches has become the gold standard in mass spectrometry based shotgun proteomics. However, as the quality of tandem mass spectra improves, direct mass spectrum sequencing gains interest as a database-independent alternative. In this chapter, the general principle of this so-called de novo sequencing is introduced along with pitfalls and challenges of the technique. The main tools available are presented with a focus on user friendly open source software which can be directly applied in everyday proteomic workflows.

  15. High Dispersion Line Profile Studies of TW HYA and Other Pre-Main Sequence Stars

    NASA Astrophysics Data System (ADS)

    Linsky, Jeffrey L.

    1984-07-01

    We propose to extend our study of line profiles in T Tauri stars by obtaining a 16 hour SWP-HI spectrum of TW Hya and 6-8 hour LWP-HI spectra of TW Hya, AK Sco, CoD -35 10525 and CoD -33 10685. High dispersion spectra of pre-main sequence (PMS) stars provide unique information on line widths, shifts, and asymmetries, as well as evidence for mass outflow, circumstellar absorption, and diagnostics for the temperature structure of the outer atmosphere layers of these complex yet incredibly important objects. We have previously obtained and studied line profiles in RU Lupi and the prototype star T Tau. RU Lupi has line profiles that are dominated by the wind expansion, for example the MgII and FeII multiplet UV1 profiles are unique in that they have a classical P Cygni shape, whereas T Tau has more symmetric emission profiles indicative of a chromosphere and hotter layers not dominated by expansion. TW Hya is different from these two previously studied stars in that it may be the brightest known example of a post-T Tauri star, and hence less active and older than the other PMS stars. We intend to compare its line profiles with those of RU Lupi and T Tauri in order to understand the differences in the non-thermal mass motions, wind expansion, and thermal structures of these three very different T Tau stars. The requested LWPHI spectra are to obtain MgII and FeII multiplet UV1. profiles of 4 different T Tauri objects so as to infer the expansion and thermal structure in their chromospheric layers.

  16. Lithium abundances for 185 main-sequence stars: Galactic evolution and stellar depletion of lithium

    NASA Astrophysics Data System (ADS)

    Chen, Y. Q.; Nissen, P. E.; Benoni, T.; Zhao, G.

    2001-06-01

    We present a survey of lithium abundances in 185 main-sequence field stars with 5600 <~ Teff <~ 6600 K and -1.4 <~ [Fe/H] <~ +0.2 based on new measurements of the equivalent width of the lambda 6708 Li I line in high-resolution spectra of 130 stars and a reanalysis of data for 55 stars from Lambert et al. (\\cite{Lambert91}). The survey takes advantage of improved photometric and spectroscopic determinations of effective temperature and metallicity as well as mass and age derived from Hipparcos absolute magnitudes, offering an opportunity to investigate the behaviour of Li as a function of these parameters. An interesting result from this study is the presence of a large gap in the log varepsilon (Li) - Teff plane, which distinguishes ``Li-dip'' stars like those first identified in the Hyades cluster by Boesgaard & Tripicco (\\cite{Boesgaard86}) from other stars with a much higher Li abundance. The Li-dip stars concentrate on a certain mass, which decreases with metallicity from about 1.4 Msun at solar metallicity to 1.1 Msun at [Fe/H] =~ -1.0. Excluding the Li-dip stars and a small group of lower mass stars with Teff < 5900 K and log varepsilon (Li) < 1.5, the remaining stars, when divided into four metallicity groups, may show a correlation between Li abundance and stellar mass. The dispersion around the log varepsilon (Li)-mass relation is about 0.2 dex below [Fe/H] =~ -0.4 and 0.3 dex above this metallicity, which cannot be explained by observational errors or differences in metallicity. Furthermore, there is no correlation between the residuals of the log varepsilon (Li)-mass relations and stellar age, which ranges from 1.5 Gyr to about 15 Gyr. This suggests that Li depletion occurs early in stellar life and that parameters other than stellar mass and metallicity affect the degree of depletion, e.g. initial rotation velocity and/or the rate of angular momentum loss. It cannot be excluded, however, that a cosmic scatter of the Li abundance in the Galaxy at a

  17. A spectroscopic and photometric study of the unique pre- main sequence system KH 15D

    NASA Astrophysics Data System (ADS)

    Hamilton, Catrina Marie

    2004-09-01

    As a class, T Tauri stars are YSOs, some which are surrounded by circumstellar disks, and are recognized as the final stage of low-mass star formation. They also represent the earliest stage of stellar evolution that is optically visible, and, therefore, can be easily studied in detail. Understanding the processes through which these young stars interact with and eventually disperse their circumstellar disks is critical for understanding how they evolve from the T Tauri phase to the zero age main sequence (ZAMS), and how this affects the formation of planets, as well as their rotational evolution. KH 15D is a unique eclipsing system that could provide invaluable insight into the evolution of circumstellar disk material, as well as clues to the close stellar environment. Discovered in 1997, this star system has been observed to undergo an eclipse every 48 days in which the star's light is diminished by 3.5 magnitudes. What is so unusual about the eclipse is that the length of the eclipse has evolved over time, growing in length from 16 days initially, to ˜25 days in 2002/2003. Evolution of disk material on these timescales has never been observed before, and therefore provides us with a unique opportunity to refine our theories about remnant disks around young stars, how they transition, possibly into planets, and what role they play as the star matures and arrives on the zero age main sequence. Additionally, high resolution spectra obtained at specific phases during the December 2001 eclipse showed that as the obscuring matter cut across the star, dramatic spectral changes in the Hα and Hβ lines were seen. Its unique eclipse produces a “natural coronographic” effect in which the stellar photosphere is occulted, revealing details of its magnetosphere and surroundings during eclipse. There is evidence that the weak-lined T Tauri star (WTTS) central to the system is actively accreting gas, although probably not at the rate of a typical classical T Tauri star

  18. Determination of Fundamental Properties of an M31 Globular Cluster from Main-Sequence Photometry

    NASA Astrophysics Data System (ADS)

    Ma, Jun; Wu, Zhenyu; Wang, Song; Fan, Zhou; Zhou, Xu; Wu, Jianghua; Jiang, Zhaoji; Chen, Jiansheng

    2010-10-01

    M31 globular cluster B379 is the first extragalactic cluster whose age was determined by main-sequence photometry. In the main-sequence photometric method, the age of a cluster is obtained by fitting its color-magnitude diagram (CMD) with stellar evolutionary models. However, different stellar evolutionary models use different parameters of stellar evolution, such as range of stellar masses, different opacities and equations of state, and different recipes, and so on. So, it is interesting to check whether different stellar evolutionary models can give consistent results for the same cluster. Brown et al. constrained the age of B379 by comparing its CMD with isochrones of the 2006 VandenBerg models. Using SSP models of Bruzual & Charlot and its multiphotometry, ZMa et al. independently determined the age of B379, which is in good agreement with the determination of Brown et al. The models of Bruzual & Charlot are calculated based on the Padova evolutionary tracks. It is necessary to check whether the age of B379 as determined based on the Padova evolutionary tracks is in agreement with the determination of Brown et al.. In this article, we redetermine the age of B379 using isochrones of the Padova stellar evolutionary models. In addition, the metal abundance, the distance modulus, and the reddening value for B379 are reported. The results obtained are consistent with the previous determinations, which include the age obtained by Brown et al. This article thus confirms the consistency of the age scale of B379 between the Padova isochrones and the 2006 VandenBerg isochrones; i.e., the comparison between the results of Brown et al. and Ma et al. is meaningful. The results reported in this article of values found for B379 are: metallicity [M/H] = log(Z/Z ⊙) = -0.325, age τ = 11.0 ± 1.5 Gyr, reddening E(B - V) = 0.08, and distance modulus (m - M)0 = 24.44 ± 0.10.

  19. Peptide de novo sequencing of mixture tandem mass spectra.

    PubMed

    Gorshkov, Vladimir; Hotta, Stéphanie Yuki Kolbeck; Verano-Braga, Thiago; Kjeldsen, Frank

    2016-09-01

    The impact of mixture spectra deconvolution on the performance of four popular de novo sequencing programs was tested using artificially constructed mixture spectra as well as experimental proteomics data. Mixture fragmentation spectra are recognized as a limitation in proteomics because they decrease the identification performance using database search engines. De novo sequencing approaches are expected to be even more sensitive to the reduction in mass spectrum quality resulting from peptide precursor co-isolation and thus prone to false identifications. The deconvolution approach matched complementary b-, y-ions to each precursor peptide mass, which allowed the creation of virtual spectra containing sequence specific fragment ions of each co-isolated peptide. Deconvolution processing resulted in equally efficient identification rates but increased the absolute number of correctly sequenced peptides. The improvement was in the range of 20-35% additional peptide identifications for a HeLa lysate sample. Some correct sequences were identified only using unprocessed spectra; however, the number of these was lower than those where improvement was obtained by mass spectral deconvolution. Tight candidate peptide score distribution and high sensitivity to small changes in the mass spectrum introduced by the employed deconvolution method could explain some of the missing peptide identifications. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  20. Peptide de novo sequencing of mixture tandem mass spectra

    PubMed Central

    Hotta, Stéphanie Yuki Kolbeck; Verano‐Braga, Thiago; Kjeldsen, Frank

    2016-01-01

    The impact of mixture spectra deconvolution on the performance of four popular de novo sequencing programs was tested using artificially constructed mixture spectra as well as experimental proteomics data. Mixture fragmentation spectra are recognized as a limitation in proteomics because they decrease the identification performance using database search engines. De novo sequencing approaches are expected to be even more sensitive to the reduction in mass spectrum quality resulting from peptide precursor co‐isolation and thus prone to false identifications. The deconvolution approach matched complementary b‐, y‐ions to each precursor peptide mass, which allowed the creation of virtual spectra containing sequence specific fragment ions of each co‐isolated peptide. Deconvolution processing resulted in equally efficient identification rates but increased the absolute number of correctly sequenced peptides. The improvement was in the range of 20–35% additional peptide identifications for a HeLa lysate sample. Some correct sequences were identified only using unprocessed spectra; however, the number of these was lower than those where improvement was obtained by mass spectral deconvolution. Tight candidate peptide score distribution and high sensitivity to small changes in the mass spectrum introduced by the employed deconvolution method could explain some of the missing peptide identifications. PMID:27329701

  1. AK Sco: a tidally induced atmospheric dynamo in a pre-main sequence binary?

    NASA Astrophysics Data System (ADS)

    Gómez de Castro, A. I.

    2009-02-01

    AK Sco is a unique source: a 10-30 Myrs old pre-main sequence spectroscopic binary composed by two nearly equal F5 stars that at periastron are separated by barely eleven stellar radii so, the stellar magnetospheres fill the Roche lobe at periastron. The orbit is not yet circularized (e = 0.47) and very strong tides are expected. This makes of AK Sco, the ideal laboratory to study the effect of gravitational tides in the stellar magnetic field building up during pre-main sequence evolution. Evidence of this effect is reported in this contribution.

  2. Laser Desorption Mass Spectrometry for DNA Sequencing and Analysis

    NASA Astrophysics Data System (ADS)

    Chen, C. H. Winston; Taranenko, N. I.; Golovlev, V. V.; Isola, N. R.; Allman, S. L.

    1998-03-01

    Rapid DNA sequencing and/or analysis is critically important for biomedical research. In the past, gel electrophoresis has been the primary tool to achieve DNA analysis and sequencing. However, gel electrophoresis is a time-consuming and labor-extensive process. Recently, we have developed and used laser desorption mass spectrometry (LDMS) to achieve sequencing of ss-DNA longer than 100 nucleotides. With LDMS, we succeeded in sequencing DNA in seconds instead of hours or days required by gel electrophoresis. In addition to sequencing, we also applied LDMS for the detection of DNA probes for hybridization LDMS was also used to detect short tandem repeats for forensic applications. Clinical applications for disease diagnosis such as cystic fibrosis caused by base deletion and point mutation have also been demonstrated. Experimental details will be presented in the meeting. abstract.

  3. The SFR-M∗ main sequence archetypal star-formation history and analytical models

    NASA Astrophysics Data System (ADS)

    Ciesla, L.; Elbaz, D.; Fensch, J.

    2017-12-01

    The star-formation history (SFH) of galaxies is a key assumption to derive their physical properties and can lead to strong biases. In this work, we derive the SFH of main sequence (MS) galaxies and show how the peak SFH of a galaxy depends on its seed mass at, for example, z = 5. This seed mass reflects the galaxy's underlying dark matter (DM) halo environment. We show that, following the MS, galaxies undergo a drastic slow down of their stellar mass growth after reaching the peak of their SFH. According to abundance matching, these masses correspond to hot and massive DM halos which state could result in less efficient gas inflows on the galaxies and thus could be the origin of limited stellar mass growth. As a result, we show that galaxies, still on the MS, can enter the passive region of the UVJ diagram while still forming stars. The best fit to the MS SFH is provided by a right skew peak function for which we provide parameters depending on the seed mass of the galaxy. The ability of the classical analytical SFHs to retrieve the star-formation rate (SFR) of galaxies from spectral energy distribution (SED) fitting is studied. Due to mathematical limitations, the exponentially declining and delayed SFH struggle to model high SFR, which starts to be problematic at z > 2. The exponentially rising and log-normal SFHs exhibit the opposite behavior with the ability to reach very high SFR, and thus model starburst galaxies, but they are not able to model low values such as those expected at low redshift for massive galaxies. By simulating galaxies SED from the MS SFH, we show that these four analytical forms recover the SFR of MS galaxies with an error dependent on the model and the redshift. They are, however, sensitive enough to probe small variations of SFR within the MS, with an error ranging from 5 to 40% depending on the SFH assumption and redshift; but all the four fail to recover the SFR of rapidly quenched galaxies. However, these SFHs lead to an artificial

  4. Sequencing of Oligourea Foldamers by Tandem Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Bathany, Katell; Owens, Neil W.; Guichard, Gilles; Schmitter, Jean-Marie

    2013-03-01

    This study is focused on sequence analysis of peptidomimetic helical oligoureas by means of tandem mass spectrometry, to build a basis for de novo sequencing for future high-throughput combinatorial library screening of oligourea foldamers. After the evaluation of MS/MS spectra obtained for model compounds with either MALDI or ESI sources, we found that the MALDI-TOF-TOF instrument gave more satisfactory results. MS/MS spectra of oligoureas generated by decay of singly charged precursor ions show major ion series corresponding to fragmentation across both CO-NH and N'H-CO urea bonds. Oligourea backbones fragment to produce a pattern of a, x, b, and y type fragment ions. De novo decoding of spectral information is facilitated by the occurrence of low mass reporter ions, representative of constitutive monomers, in an analogous manner to the use of immonium ions for peptide sequencing.

  5. On the Use of the Main-sequence Knee (Saddle) to Measure Globular Cluster Ages

    NASA Astrophysics Data System (ADS)

    Saracino, S.; Dalessandro, E.; Ferraro, F. R.; Lanzoni, B.; Origlia, L.; Salaris, M.; Pietrinferni, A.; Geisler, D.; Kalirai, J. S.; Correnti, M.; Cohen, R. E.; Mauro, F.; Villanova, S.; Moni Bidin, C.

    2018-06-01

    In this paper, we review the operational definition of the so-called main-sequence knee (MS-knee), a feature in the color-magnitude diagram (CMD) occurring at the low-mass end of the MS. The magnitude of this feature is predicted to be independent of age at fixed chemical composition. For this reason, its difference in magnitude with respect to the MS turn-off (MS-TO) point has been suggested as a possible diagnostic to estimate absolute globular cluster (GC) ages. We first demonstrate that the operational definition of the MS-knee currently adopted in the literature refers to the inflection point of the MS (which we here more appropriately named MS-saddle), a feature that is well distinct from the knee and which cannot be used as its proxy. The MS-knee is only visible in near-infrared CMDs, while the MS-saddle can be also detected in optical–NIR CMDs. By using different sets of isochrones, we then demonstrate that the absolute magnitude of the MS-knee varies by a few tenths of a dex from one model to another, thus showing that at the moment stellar models may not capture the full systematic error in the method. We also demonstrate that while the absolute magnitude of the MS-saddle is almost coincident in different models, it has a systematic dependence on the adopted color combinations which is not predicted by stellar models. Hence, it cannot be used as a reliable reference for absolute age determination. Moreover, when statistical and systematic uncertainties are properly taken into account, the difference in magnitude between the MS-TO and the MS-saddle does not provide absolute ages with better accuracy than other methods like the MS-fitting.

  6. White dwarf-main sequence binaries from LAMOST: the DR5 catalogue

    NASA Astrophysics Data System (ADS)

    Ren, J.-J.; Rebassa-Mansergas, A.; Parsons, S. G.; Liu, X.-W.; Luo, A.-L.; Kong, X.; Zhang, H.-T.

    2018-07-01

    We present the data release (DR) 5 catalogue of white dwarf-main sequence (WDMS) binaries from the Large sky Area Multi-Object fibre Spectroscopic Telescope (LAMOST). The catalogue contains 876 WDMS binaries, of which 757 are additions to our previous LAMOST DR1 sample and 357 are systems that have not been published before. We also describe a LAMOST-dedicated survey that aims at obtaining spectra of photometrically selected WDMS binaries from the Sloan Digital Sky Survey (SDSS) that are expected to contain cool white dwarfs and/or early-type M dwarf companions. This is a population under-represented in previous SDSS WDMS binary catalogues. We determine the stellar parameters (white dwarf effective temperatures, surface gravities and masses, and M dwarf spectral types) of the LAMOST DR5 WDMS binaries and make use of the parameter distributions to analyse the properties of the sample. We find that, despite our efforts, systems containing cool white dwarfs remain under-represented. Moreover, we make use of LAMOST DR5 and SDSS DR14 (when available) spectra to measure the Na I λλ 8183.27, 8194.81 absorption doublet and/or Hα emission radial velocities of our systems. This allows identifying 128 binaries displaying significant radial velocity variations, 76 of which are new. Finally, we cross-match our catalogue with the Catalina Surveys and identify 57 systems displaying light-curve variations. These include 16 eclipsing systems, two of which are new, and nine binaries that are new eclipsing candidates. We calculate periodograms from the photometric data and measure (estimate) the orbital periods of 30 (15) WDMS binaries.

  7. X-ray Emission from Pre-Main-Sequence Stars - Testing the Solar Analogy

    NASA Technical Reports Server (NTRS)

    Skinner, Stephen L.

    2000-01-01

    This LTSA award funded my research on the origin of stellar X-ray emission and the validity of the solar-stellar analogy. This research broadly addresses the relevance of our current understanding of solar X-ray physics to the interpretation of X-ray emission from stars in general. During the past five years the emphasis has been on space-based X-ray observations of very young stars in star-forming regions (T Tauri stars and protostars), cool solar-like G stars, and evolved high-mass Wolf-Rayet (WR) stars. These observations were carried out primarily with the ASCA and ROSAT space-based observatories (and most recently with Chandra), supplemented by ground-based observations. This research has focused on the identification of physical processes that are responsible for the high levels of X-ray emission seen in pre-main-sequence (PMS) stars, active cool stars, and WR stars. A related issue is how the X-ray emission of such stars changes over time, both on short timescales of days to years and on evolutionary timescales of millions of years. In the case of the Sun it is known that magnetic fields play a key role in the production of X-rays by confining the coronal plasma in loop-like structures where it is heated to temperatures of several million K. The extent to which the magnetically-confined corona interpretation can be applied to other X-ray emitting stars is the key issue that drives the research summarized here.

  8. White dwarf-main sequence binaries from LAMOST: the DR5 catalogue

    NASA Astrophysics Data System (ADS)

    Ren, J.-J.; Rebassa-Mansergas, A.; Parsons, S. G.; Liu, X.-W.; Luo, A.-L.; Kong, X.; Zhang, H.-T.

    2018-03-01

    We present the data release (DR) 5 catalogue of white dwarf-main sequence (WDMS) binaries from the Large Area Multi-Object fiber Spectroscopic Telescope (LAMOST). The catalogue contains 876 WDMS binaries, of which 757 are additions to our previous LAMOST DR1 sample and 357 are systems that have not been published before. We also describe a LAMOST-dedicated survey that aims at obtaining spectra of photometrically-selected WDMS binaries from the Sloan Digital Sky Survey (SDSS) that are expected to contain cool white dwarfs and/or early type M dwarf companions. This is a population under-represented in previous SDSS WDMS binary catalogues. We determine the stellar parameters (white dwarf effective temperatures, surface gravities and masses, and M dwarf spectral types) of the LAMOST DR5 WDMS binaries and make use of the parameter distributions to analyse the properties of the sample. We find that, despite our efforts, systems containing cool white dwarfs remain under-represented. Moreover, we make use of LAMOST DR5 and SDSS DR14 (when available) spectra to measure the Na I λλ 8183.27, 8194.81 absorption doublet and/or Hα emission radial velocities of our systems. This allows identifying 128 binaries displaying significant radial velocity variations, 76 of which are new. Finally, we cross-match our catalogue with the Catalina Surveys and identify 57 systems displaying light curve variations. These include 16 eclipsing systems, two of which are new, and nine binaries that are new eclipsing candidates. We calculate periodograms from the photometric data and measure (estimate) the orbital periods of 30 (15) WDMS binaries.

  9. Analysis of flares in the chromosphere and corona of main- and pre-main-sequence M-type stars

    NASA Astrophysics Data System (ADS)

    Crespo-Chacón, I.

    2015-11-01

    This Ph.D. Thesis revolves around flares on main- and pre-main-sequence M-type stars. We use observations in different wavelength ranges with the aim of analysing the effects of flares at different layers of stellar atmospheres. In particular, optical and X-ray observations are used so that we can study how flares affect, respectively, the chromosphere and the corona of stars. In the optical range we carry out a high temporal resolution spectroscopic monitoring of UV Ceti-type stars aimed at detecting non-white-light flares (the most typical kind of solar flares) in stars other than the Sun. With these data we confirm that non-white-light flares are a frequent phenomenon in UV Ceti-type stars, as observed in the Sun. We study and interpret the behaviour of different chromospheric lines during the flares detected on AD Leo. By using a simplified slab model of flares (Jevremović et al. 1998), we are able to determine the physical parameters of the chromospheric flaring plasma (electron density and electron temperature), the temperature of the underlying source, and the surface area covered by the flaring plasma. We also search for possible relationships between the physical parameters of the flaring plasma and other properties such as the flare duration, area, maximum flux and released energy. This work considerably extends the existing sample of stellar flares analysed with good quality spectroscopy in the optical range. In X-rays we take advantage of the great sensitivity, wide energy range, high energy resolution, and continuous time coverage of the EPIC detectors - on-board the XMMNewton satellite - in order to perform time-resolved spectral analysis of coronal flares. In particular, in the UV Ceti-type star CC Eri we study two flares that are weaker than those typically reported in the literature (allowing us to speculate about the role of flares as heating agents of stellar atmospheres); while in the pre-main-sequence M-type star TWA 11B (with no signatures of

  10. SDSS-IV MaNGA: Spatially Resolved Star Formation Main Sequence and LI(N)ER Sequence

    NASA Astrophysics Data System (ADS)

    Hsieh, B. C.; Lin, Lihwai; Lin, J. H.; Pan, H. A.; Hsu, C. H.; Sánchez, S. F.; Cano-Díaz, M.; Zhang, K.; Yan, R.; Barrera-Ballesteros, J. K.; Boquien, M.; Riffel, R.; Brownstein, J.; Cruz-González, I.; Hagen, A.; Ibarra, H.; Pan, K.; Bizyaev, D.; Oravetz, D.; Simmons, A.

    2017-12-01

    We present our study on the spatially resolved Hα and M * relation for 536 star-forming and 424 quiescent galaxies taken from the MaNGA survey. We show that the star formation rate surface density ({{{Σ }}}{SFR}), derived based on the Hα emissions, is strongly correlated with the M * surface density ({{{Σ }}}* ) on kiloparsec scales for star-forming galaxies and can be directly connected to the global star-forming sequence. This suggests that the global main sequence may be a consequence of a more fundamental relation on small scales. On the other hand, our result suggests that ∼20% of quiescent galaxies in our sample still have star formation activities in the outer region with lower specific star formation rate (SSFR) than typical star-forming galaxies. Meanwhile, we also find a tight correlation between {{{Σ }}}{{H}α } and {{{Σ }}}* for LI(N)ER regions, named the resolved “LI(N)ER” sequence, in quiescent galaxies, which is consistent with the scenario that LI(N)ER emissions are primarily powered by the hot, evolved stars as suggested in the literature.

  11. YSOVAR: Six Pre-main-sequence Eclipsing Binaries in the Orion Nebula Cluster

    DTIC Science & Technology

    2012-06-25

    reserved. Printed in the U.S.A. YSOVAR: SIX PRE-MAIN-SEQUENCE ECLIPSING BINARIES IN THE ORION NEBULA CLUSTER M. Morales-Calderón1,2, J. R. Stauffer1, K. G...multi-color light curves for∼2400 candidate Orion Nebula Cluster (ONC) members from our Warm Spitzer Exploration Science Program YSOVAR, we have...readable tables 1. INTRODUCTION The Orion Nebula Cluster (ONC) contains several thousand members, and since it is nearby, it provides an excellent em

  12. Searching for the signatures of terrestrial planets in F-, G-type main-sequence stars

    NASA Astrophysics Data System (ADS)

    González Hernández, J. I.; Delgado-Mena, E.; Sousa, S. G.; Israelian, G.; Santos, N. C.; Adibekyan, V. Zh.; Udry, S.

    2013-04-01

    Context. Detailed chemical abundances of volatile and refractory elements have been discussed in the context of terrestrial-planet formation during in past years. Aims: The HARPS-GTO high-precision planet-search program has provided an extensive database of stellar spectra, which we have inspected in order to select the best-quality spectra available for late type stars. We study the volatile-to-refractory abundance ratios to investigate their possible relation with the low-mass planetary formation. Methods: We present a fully differential chemical abundance analysis using high-quality HARPS and UVES spectra of 61 late F- and early G-type main-sequence stars, where 29 are planet hosts and 32 are stars without detected planets. Results: As for the previous sample of solar analogs, these stars slightly hotter than the Sun also provide very accurate Galactic chemical abundance trends in the metallicity range -0.3 < [Fe/H] < 0.4. Stars with and without planets show similar mean abundance ratios. Moreover, when removing the Galactic chemical evolution effects, these mean abundance ratios, Δ [X/Fe] SUN - STARS, against condensation temperature, tend to exhibit less steep trends with nearly zero or slightly negative slopes. We have also analyzed a subsample of 26 metal-rich stars, 13 with and 13 without known planets, with spectra at S/N ~ 850, on average, in the narrow metallicity range 0.04 < [Fe/H] < 0.19. We find the similar, although not equal, abundance pattern with negative slopes for both samples of stars with and without planets. Using stars at S/N ≥ 550 provides equally steep abundance trends with negative slopes for stars both with and without planets. We revisit the sample of solar analogs to study the abundance patterns of these stars, in particular, 8 stars hosting super-Earth-like planets. Among these stars having very low-mass planets, only four of them reveal clear increasing abundance trends versus condensation temperature. Conclusions: Finally, we

  13. Discovery of magnetic A supergiants: the descendants of magnetic main-sequence B stars

    NASA Astrophysics Data System (ADS)

    Neiner, Coralie; Oksala, Mary E.; Georgy, Cyril; Przybilla, Norbert; Mathis, Stéphane; Wade, Gregg; Kondrak, Matthias; Fossati, Luca; Blazère, Aurore; Buysschaert, Bram; Grunhut, Jason

    2017-10-01

    In the context of the high resolution, high signal-to-noise ratio, high sensitivity, spectropolarimetric survey BritePol, which complements observations by the BRITE constellation of nanosatellites for asteroseismology, we are looking for and measuring the magnetic field of all stars brighter than V = 4. In this paper, we present circularly polarized spectra obtained with HarpsPol at ESO in La Silla (Chile) and ESPaDOnS at CFHT (Hawaii) for three hot evolved stars: ι Car, HR 3890 and ɛ CMa. We detected a magnetic field in all three stars. Each star has been observed several times to confirm the magnetic detections and check for variability. The stellar parameters of the three objects were determined and their evolutionary status was ascertained employing evolution models computed with the Geneva code. ɛ CMa was already known and is confirmed to be magnetic, but our modelling indicates that it is located near the end of the main sequence, I.e. it is still in a core hydrogen burning phase. ι Car and HR 3890 are the first discoveries of magnetic hot supergiants located well after the end of the main sequence on the Hertzsprung-Russell diagram. These stars are probably the descendants of main-sequence magnetic massive stars. Their current field strength (a few G) is compatible with magnetic flux conservation during stellar evolution. These results provide observational constraints for the development of future evolutionary models of hot stars including a fossil magnetic field.

  14. A new Böhm-Vitense gap in the temperature range 5560 to 5610 K in the main sequence hm-Vitense gap in the main sequence

    NASA Astrophysics Data System (ADS)

    Kovtyukh, V. V.; Soubiran, C.; Belik, S. I.

    2004-12-01

    Highly precise temperatures (σ = 10-15 K) have been determined from line depth ratios for a set of 248 F-K field dwarfs of about solar metallicity (-0.5 < [Fe/H] < +0.4), based on high resolution (R=42 000), high S/N echelle spectra. A new gap has been discovered in the distribution of stars on the Main Sequence in the temperature range 5560 to 5610 K. This gap coincides with a jump in the microturbulent velocity Vt and the well-known Li depression near 5600 K in field dwarfs and open clusters. As the principal cause of the observed discontinuities in stellar properties we propose the penetration of the convective zone into the inner layers of stars slightly less massive than the Sun and related to it, a change in the temperature gradient. Based on spectra collected with the ELODIE spectrograph at the 1.93-m telescope of the Observatoire de Haute-Provence (France). Full Table 1 is only available in electronic form at http://www.edpsciences.org

  15. TESTING SCALING RELATIONS FOR SOLAR-LIKE OSCILLATIONS FROM THE MAIN SEQUENCE TO RED GIANTS USING KEPLER DATA

    SciTech Connect

    Huber, D.; Bedding, T. R.; Stello, D.

    2011-12-20

    We have analyzed solar-like oscillations in {approx}1700 stars observed by the Kepler Mission, spanning from the main sequence to the red clump. Using evolutionary models, we test asteroseismic scaling relations for the frequency of maximum power ({nu}{sub max}), the large frequency separation ({Delta}{nu}), and oscillation amplitudes. We show that the difference of the {Delta}{nu}-{nu}{sub max} relation for unevolved and evolved stars can be explained by different distributions in effective temperature and stellar mass, in agreement with what is expected from scaling relations. For oscillation amplitudes, we show that neither (L/M){sup s} scaling nor the revised scaling relation by Kjeldsen andmore » Bedding is accurate for red-giant stars, and demonstrate that a revised scaling relation with a separate luminosity-mass dependence can be used to calculate amplitudes from the main sequence to red giants to a precision of {approx}25%. The residuals show an offset particularly for unevolved stars, suggesting that an additional physical dependency is necessary to fully reproduce the observed amplitudes. We investigate correlations between amplitudes and stellar activity, and find evidence that the effect of amplitude suppression is most pronounced for subgiant stars. Finally, we test the location of the cool edge of the instability strip in the Hertzsprung-Russell diagram using solar-like oscillations and find the detections in the hottest stars compatible with a domain of hybrid stochastically excited and opacity driven pulsation.« less

  16. JUPITER WILL BECOME A HOT JUPITER: CONSEQUENCES OF POST-MAIN-SEQUENCE STELLAR EVOLUTION ON GAS GIANT PLANETS

    SciTech Connect

    Spiegel, David S.; Madhusudhan, Nikku, E-mail: dave@ias.edu, E-mail: Nikku.Madhusudhan@yale.edu

    When the Sun ascends the red giant branch (RGB), its luminosity will increase and all the planets will receive much greater irradiation than they do now. Jupiter, in particular, might end up more highly irradiated than the hot Neptune GJ 436b and, hence, could appropriately be termed a 'hot Jupiter'. When their stars go through the RGB or asymptotic giant branch stages, many of the currently known Jupiter-mass planets in several-AU orbits will receive levels of irradiation comparable to the hot Jupiters, which will transiently increase their atmospheric temperatures to {approx}1000 K or more. Furthermore, massive planets around post-main-sequence starsmore » could accrete a non-negligible amount of material from the enhanced stellar winds, thereby significantly altering their atmospheric chemistry as well as causing a significant accretion luminosity during the epochs of most intense stellar mass loss. Future generations of infrared observatories might be able to probe the thermal and chemical structure of such hot Jupiters' atmospheres. Finally, we argue that, unlike their main-sequence analogs (whose zonal winds are thought to be organized in only a few broad, planetary-scale jets), red-giant hot Jupiters should have multiple, narrow jets of zonal winds and efficient day-night redistribution.« less

  17. Post-main-sequence Evolution of Icy Minor Planets. II. Water Retention and White Dwarf Pollution around Massive Progenitor Stars

    SciTech Connect

    Malamud, Uri; Perets, Hagai B., E-mail: uri.mal@tx.technion.ac.il, E-mail: hperets@physics.technion.ac.il

    Most studies suggest that the pollution of white dwarf (WD) atmospheres arises from the accretion of minor planets, but the exact properties of polluting material, and in particular the evidence for water in some cases, are not yet understood. Here we study the water retention of small icy bodies in exo-solar planetary systems, as their respective host stars evolve through and off the main sequence and eventually become WDs. We explore, for the first time, a wide range of star masses and metallicities. We find that the mass of the WD progenitor star is of crucial importance for the retentionmore » of water, while its metallicity is relatively unimportant. We predict that minor planets around lower-mass WD progenitors would generally retain more water and would do so at closer distances from the WD than compared with high-mass progenitors. The dependence of water retention on progenitor mass and other parameters has direct implications for the origin of observed WD pollution, and we discuss how our results and predictions might be tested in the future as more observations of WDs with long cooling ages become available.« less

  18. The influence of radiative core growth on coronal X-ray emission from pre-main-sequence stars

    NASA Astrophysics Data System (ADS)

    Gregory, Scott G.; Adams, Fred C.; Davies, Claire L.

    2016-04-01

    Pre-main-sequence (PMS) stars of mass ≳0.35 M⊙ transition from hosting fully convective interiors to configurations with a radiative core and outer convective envelope during their gravitational contraction. This stellar structure change influences the external magnetic field topology and, as we demonstrate herein, affects the coronal X-ray emission as a stellar analogue of the solar tachocline develops. We have combined archival X-ray, spectroscopic, and photometric data for ˜1000 PMS stars from five of the best studied star-forming regions: the Orion Nebula Cluster, NGC 2264, IC 348, NGC 2362, and NGC 6530. Using a modern, PMS calibrated, spectral type-to-effective temperature and intrinsic colour scale, we de-redden the photometry using colours appropriate for each spectral type, and determine the stellar mass, age, and internal structure consistently for the entire sample. We find that PMS stars on Henyey tracks have, on average, lower fractional X-ray luminosities (LX/L*) than those on Hayashi tracks, where this effect is driven by changes in LX. X-ray emission decays faster with age for higher mass PMS stars. There is a strong correlation between L* and LX for Hayashi track stars but no correlation for Henyey track stars. There is no correlation between LX and radiative core mass or radius. However, the longer stars have spent with radiative cores, the less X-ray luminous they become. The decay of coronal X-ray emission from young early K to late G-type PMS stars, the progenitors of main-sequence A-type stars, is consistent with the dearth of X-ray detections of the latter.

  19. Stellar Activity at the End of the Main Sequence: GHRS Observations of the M8 Ve Star VB 10

    NASA Technical Reports Server (NTRS)

    Linsky, Jeffrey L.; Wood, Brian E.; Brown, Alexander; Giampapa, Mark S.; Ambruster, Carol

    1995-01-01

    We present Goddard High Resolution Spectrograph observations of the M8 Ve star VB 10 (equal to G1 752B), located very near the end of the stellar main sequence, and its dM3.5 binary companion G1 752A. These coeval stars provide a test bed for studying whether the outer atmospheres of stars respond to changes in internal structure as stars become fully convective near mass 0.3 solar mass (about spectral type M5), where the nature of the stellar magnetic dynamo presumably changes, and near the transition from red to brown dwarfs near mass 0.08 solar mass (about spectral type M9), when hydrogen burning ceases at the end of the main sequence. We obtain upper limits for the quiescent emission of VB 10 but observe a transition region spectrum during a large flare, which indicates that some type of magnetic dynamo must be present. Two indirect lines of evidence-scaling from the observed X-ray emission and scaling from a time-resolved flare on AD Leo suggest that the fraction of the stellar bolometric luminosity that heats the transition region of VB 10 outside of obvious flares is comparable to, or larger than, that for G1 752A. This suggests an increase in the magnetic heating rates, as measured by L(sub line)/L(sub bol) ratios, across the radiative/convective core boundary and as stars approach the red/brown dwarf boundary. These results provide new constraints for dynamo models and models of coronal and transition-region heating in late-type stars.

  20. Mass spectrometry-based protein identification by integrating de novo sequencing with database searching.

    PubMed

    Wang, Penghao; Wilson, Susan R

    2013-01-01

    Mass spectrometry-based protein identification is a very challenging task. The main identification approaches include de novo sequencing and database searching. Both approaches have shortcomings, so an integrative approach has been developed. The integrative approach firstly infers partial peptide sequences, known as tags, directly from tandem spectra through de novo sequencing, and then puts these sequences into a database search to see if a close peptide match can be found. However the current implementation of this integrative approach has several limitations. Firstly, simplistic de novo sequencing is applied and only very short sequence tags are used. Secondly, most integrative methods apply an algorithm similar to BLAST to search for exact sequence matches and do not accommodate sequence errors well. Thirdly, by applying these methods the integrated de novo sequencing makes a limited contribution to the scoring model which is still largely based on database searching. We have developed a new integrative protein identification method which can integrate de novo sequencing more efficiently into database searching. Evaluated on large real datasets, our method outperforms popular identification methods.

  1. A buried marine depositional sequence (Presumpscot FM. ) N. of the marine limit, Waterboro, Maine

    SciTech Connect

    Morency, R.E.

    Subsurface investigations conducted in Waterboro, ME (York Co.) in connection with studies of two hazardous waste sites and a municipal water supply exploration project, have demonstrated that a laterally extensive sequence of marine deposits underlies surficial sediments mapped as non-esker ice contact glacio-fluvial deposits. The marine deposits consist of a fining-downwards sequence of grey, micaceous sands (fine to medium, grading down to a silty-fine sand), which grade downward into a thick ([plus minus] 30 feet) grey silt/clay unit, which itself shows a fining-downward trend. The stratigraphy is likely correlative to the Presumpscot Formation, as described by Bloom (1963). The bottommore » of the regressive marine sequence is marked at several locations by a thin layer of sand-sized biotite mica. Lodgement till was encountered only at scattered localities (in boreholes) at each site. The bedrock surface is of considerable relief, with changes of 200--300 feet over short distances detected. The sequence appears to be the record of a rapidly transgressing sea which inundated a valley where outwash had been deposited by meltwater ahead of retreating ice. As the sea retreated, up to 70 feet of sediment was deposited in a continuous, coarsening-upwards sequence. Subsequent to the marine regression, the sediments were reworked in a subaerial (braided stream) environment. The Surficial Geologic Map of Maine shows that the inland limit of late-glacial marine submergence is located approximately 8 miles southwest of Waterboro, in Alfred, Maine. The marine limit in Alfred takes the form of a NNE trending, blunt-ended embayment. The results of this study suggest that the marine embayment once extended northward from Alfred, and is now a buried feature, possibly representing a preglacial valley, which hosted an estuary in late Wisconsonian time.« less

  2. 76 FR 55161 - Boston and Maine Corporation-Abandonment Exemption-Middlesex County, Mass.; Springfield Terminal...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-09-06

    ...\\ Docket No. AB 355; Sub-No. 39X] Boston and Maine Corporation--Abandonment Exemption--Middlesex County, Mass.; Springfield Terminal Railway Company; Discontinuance of Service Exemption; Middlesex County, MA... Middlesex County, Mass. The line traverses United States Postal Service Zip Codes 02471 and 02138...

  3. POST-MAIN SEQUENCE EVOLUTION OF ICY MINOR PLANETS: IMPLICATIONS FOR WATER RETENTION AND WHITE DWARF POLLUTION

    SciTech Connect

    Malamud, Uri; Perets, Hagai B., E-mail: uri.mal@tx.technion.ac.il, E-mail: hperets@physics.technion.ac.il

    Most observations of polluted white dwarf atmospheres are consistent with accretion of water-depleted planetary material. Among tens of known cases, merely two involve accretion of objects that contain a considerable mass fraction of water. The purpose of this study is to investigate the relative scarcity of these detections. Based on a new and highly detailed model, we evaluate the retention of water inside icy minor planets during the high-luminosity stellar evolution that follows the main sequence. Our model fully considers the thermal, physical, and chemical evolution of icy bodies, following their internal differentiation as well as water depletion, from themore » moment of their birth and through all stellar evolution phases preceding the formation of the white dwarf. We also account for different initial compositions and formation times. Our results differ from previous studies, which have either underestimated or overestimated water retention. We show that water can survive in a variety of circumstances and in great quantities, and therefore other possibilities are discussed in order to explain the infrequency of water detection. We predict that the sequence of accretion is such that water accretes earlier, and more rapidly, than the rest of the silicate disk, considerably reducing the chance of its detection in H-dominated atmospheres. In He-dominated atmospheres, the scarcity of water detections could be observationally biased. It implies that the accreted material is typically intrinsically dry, which may be the result of the inside-out depopulation sequence of minor planets.« less

  4. Discovery of Extended Main-sequence Turnoffs in Four Young Massive Clusters in the Magellanic Clouds

    SciTech Connect

    Li, Chengyuan; De Grijs, Richard; Deng, Licai

    An increasing number of young massive clusters (YMCs) in the Magellanic Clouds have been found to exhibit bimodal or extended main sequences (MSs) in their color–magnitude diagrams (CMDs). These features are usually interpreted in terms of a coeval stellar population with different stellar rotational rates, where the blue and red MS stars are populated by non- (or slowly) and rapidly rotating stellar populations, respectively. However, some studies have shown that an age spread of several million years is required to reproduce the observed wide turnoff regions in some YMCs. Here we present the ultraviolet–visual CMDs of four Large and Smallmore » Magellanic Cloud YMCs, NGC 330, NGC 1805, NGC 1818, and NGC 2164, based on high-precision Hubble Space Telescope photometry. We show that they all exhibit extended main-sequence turnoffs (MSTOs). The importance of age spreads and stellar rotation in reproducing the observations is investigated. The observed extended MSTOs cannot be explained by stellar rotation alone. Adopting an age spread of 35–50 Myr can alleviate this difficulty. We conclude that stars in these clusters are characterized by ranges in both their ages and rotation properties, but the origin of the age spread in these clusters remains unknown.« less

  5. Interferometric observations of main-sequence stars: fundamental stellar astrophysics, circumstellar matter, and kinematics

    NASA Astrophysics Data System (ADS)

    Bakker, Eric J.; Eiroa, Carlos

    2003-10-01

    With our minds focussed on the direct detection of planets using the space interferometry mission DARWIN/TPF, we have made an attempt to identify how the set of ESO Very Large Telescope Interferometer instruments available now, and in the near future (VINCI, MIDI, AMBER, GENIE, FINITO and PRIMA) could contribute to the DARWIN/TPF precursory science program. In particular related to the identification of a short list of science stars to be observed with DARWIN/TPF. We have identified two research projects which can be viewed as DARWIN/TPF precursory science and can be embarked upon shortly using the available VLTI instruments: (1) the direct measurement of stellar angular diameters of a statistically meaningful sample of main-sequence stars with AMBER; (2) an interferometric study of those main-sequence stars that exhibit an infrared excess with either AMBER or MIDI. On the longer run, VLTI can obviously make a significant impact through the exploitation of the infrared nuller GENIE and the astrometric facility PRIMA.

  6. Discovery of Extended Main-sequence Turnoffs in Four Young Massive Clusters in the Magellanic Clouds

    NASA Astrophysics Data System (ADS)

    Li, Chengyuan; de Grijs, Richard; Deng, Licai; Milone, Antonino P.

    2017-08-01

    An increasing number of young massive clusters (YMCs) in the Magellanic Clouds have been found to exhibit bimodal or extended main sequences (MSs) in their color-magnitude diagrams (CMDs). These features are usually interpreted in terms of a coeval stellar population with different stellar rotational rates, where the blue and red MS stars are populated by non- (or slowly) and rapidly rotating stellar populations, respectively. However, some studies have shown that an age spread of several million years is required to reproduce the observed wide turnoff regions in some YMCs. Here we present the ultraviolet-visual CMDs of four Large and Small Magellanic Cloud YMCs, NGC 330, NGC 1805, NGC 1818, and NGC 2164, based on high-precision Hubble Space Telescope photometry. We show that they all exhibit extended main-sequence turnoffs (MSTOs). The importance of age spreads and stellar rotation in reproducing the observations is investigated. The observed extended MSTOs cannot be explained by stellar rotation alone. Adopting an age spread of 35-50 Myr can alleviate this difficulty. We conclude that stars in these clusters are characterized by ranges in both their ages and rotation properties, but the origin of the age spread in these clusters remains unknown.

  7. LESSONS IN DE NOVO PEPTIDE SEQUENCING BY TANDEM MASS SPECTROMETRY

    PubMed Central

    Medzihradszky, Katalin F.; Chalkley, Robert J.

    2015-01-01

    Mass spectrometry has become the method of choice for the qualitative and quantitative characterization of protein mixtures isolated from all kinds of living organisms. The raw data in these studies are MS/MS spectra, usually of peptides produced by proteolytic digestion of a protein. These spectra are “translated” into peptide sequences, normally with the help of various search engines. Data acquisition and interpretation have both been automated, and most researchers look only at the summary of the identifications without ever viewing the underlying raw data used for assignments. Automated analysis of data is essential due to the volume produced. However, being familiar with the finer intricacies of peptide fragmentation processes, and experiencing the difficulties of manual data interpretation allow a researcher to be able to more critically evaluate key results, particularly because there are many known rules of peptide fragmentation that are not incorporated into search engine scoring. Since the most commonly used MS/MS activation method is collision-induced dissociation (CID), in this article we present a brief review of the history of peptide CID analysis. Next, we provide a detailed tutorial on how to determine peptide sequences from CID data. Although the focus of the tutorial is de novo sequencing, the lessons learned and resources supplied are useful for data interpretation in general. PMID:25667941

  8. The great escape - III. Placing post-main-sequence evolution of planetary and binary systems in a Galactic context

    NASA Astrophysics Data System (ADS)

    Veras, Dimitri; Evans, N. Wyn; Wyatt, Mark C.; Tout, Christopher A.

    2014-01-01

    Our improving understanding of the life cycle of planetary systems prompts investigations of the role of the Galenvironment before, during and after asymptotic giant branch (AGB) stellar evolution. Here, we investigate the interplay between stellar mass-loss, Galactic tidal perturbations and stellar flybys for evolving stars which host one planet, smaller body or stellar binary companion and reside in the Milky Way's bulge or disc. We find that the potential evolutionary pathways from a main sequence (MS) to a white dwarf (WD) planetary system are a strong function of Galactocentric distance only with respect to the prevalence of stellar flybys. Planetary ejection and collision with the parent star should be more common towards the bulge. At a given location anywhere in the Galaxy, if the mass-loss is adiabatic, then the secondary is likely to avoid close flybys during AGB evolution, and cannot eventually escape the resulting WD because of Galactic tides alone. Partly because AGB mass-loss will shrink a planetary system's Hill ellipsoid axes by about 20 to 40 per cent, Oort clouds orbiting WDs are likely to be more depleted and dynamically excited than on the MS.

  9. Analysis of expressed sequence tags from the four main developmental stages of Trypanosoma congolense

    PubMed Central

    Helm, Jared R.; Hertz-Fowler, Christiane; Aslett, Martin; Berriman, Matthew; Sanders, Mandy; Quail, Michael A.; Soares, Marcelo B.; Bonaldo, Maria F.; Sakurai, Tatsuya; Inoue, Noboru; Donelson, John E.

    2009-01-01

    Trypanosoma congolense is one of the most economically important pathogens of livestock in Africa. Culture-derived parasites of each of the three main insect stages of the T. congolense life cycle, i.e., the procyclic, epimastigote and metacyclic stages, and bloodstream stage parasites isolated from infected mice, were used to construct stage-specific cDNA libraries and expressed sequence tags (ESTs or cDNA clones) in each library were sequenced. Thirteen EST clusters encoding different variant surface glycoproteins (VSGs) were detected in the metacyclic library and twenty-six VSG EST clusters were found in the bloodstream library, six of which are shared by the metacyclic library. Rare VSG ESTs are present in the epimastigote library, and none were detected in the procyclic library. ESTs encoding enzymes that catalyze oxidative phosphorylation and amino acid metabolism are about twice as abundant in the procyclic and epimastigote stages as in the metacyclic and bloodstream stages. In contrast, ESTs encoding enzymes involved in glycolysis, the citric acid cycle and nucleotide metabolism are about the same in all four developmental stages. Cysteine proteases, kinases and phosphatases are the most abundant enzyme groups represented by the ESTs. All four libraries contain T. congolense-specific expressed sequences not present in the T. brucei and T. cruzi genomes. Normalized cDNA libraries were constructed from the metacyclic and bloodstream stages, and found to be further enriched for T. congolense-specific ESTs. Given that cultured T. congolense offers an experimental advantage over other African trypanosome species, these ESTs provide a basis for further investigation of the molecular properties of these four developmental stages, especially the epimastigote and metacyclic stages for which it is difficult to obtain large quantities of organisms. The T. congolense EST databases are available at: http://www.sanger.ac.uk/Projects/T_congolense/EST_index.shtml. PMID

  10. New radio detections of early-type pre-main-sequence stars

    NASA Technical Reports Server (NTRS)

    Skinner, Stephen L.; Brown, Alexander; Linsky, Jeffrey L.

    1990-01-01

    Results of VLA radio continuum observations of 13 early-type pre-main-sequence stars selected from the 1984 catalog of Finkenzeller and Mundt are presented. The stars HD 259431 and MWC 1080 were detected at 3.6 cm, while HD 200775 and TY CrA were detected at both 3.6 and 6 cm. The flux density of HD 200775 has a frequency dependence consistent with the behavior expected for free-free emission originating in a fully ionized wind. However, an observation in A configuration suggests that the source geometry may not be spherically symmetric. In contrast, the spectral index of TY CrA is negative with a flux behavior implying nonthermal emission. The physical mechanism responsible for the nonthermal emission has not yet been identified, although gyrosynchrotron and synchrotron processes cannot be ruled out.

  11. ASCA X-ray observations of pre-main-sequence stars

    NASA Technical Reports Server (NTRS)

    Skinner, S. L.; Walter, F. M.; Yamauchi, S.

    1996-01-01

    The results of recent Advanced Satellite for Cosmology and Astrophysics (ASCA) X-ray observations of two pre-main sequence stars are presented: the weak emission line T Tauri star HD 142361, and the Herbig Ae star HD 104237. The solid state imaging spectrometer spectra for HD 142361 shows a clear emission line from H-like Mg 7, and spectral fits reveal a multiple temperature plasma with a hot component of at least 16 MK. The spectra of HD 104237 show a complex temperature structure with the hottest plasma at temperatures of greater than 30 MK. It is concluded that mechanisms that predict only soft X-ray emission can be dismissed for Herbig Ae stars.

  12. Possibility that the far ultraviolet excess in M31 is due to main sequence stars

    NASA Technical Reports Server (NTRS)

    Tinsley, B. M.

    1972-01-01

    The far ultraviolet excess in the central region of M31, observed by OAO-2, could be due to young main sequence stars. More than enough such stars are present in the model for the M31 inner disk population derived by Tinsley and Spinrad (1971) to match line- and color-indices at longer wavelengths. If the far ultraviolet radiation of typical galaxies arises from young stars, the theoretical ultraviolet background is enhanced greatly by evolutionary effects. For evolution at the rate of Tinsley and Spinrad's model for M31, or of Arnett's (1971) linear model for our galaxy, the enhancement is a factor 2.5 to 14, depending on the Hubble constant and the spectrum at wavelengths below 1700 A.

  13. A surprise at the bottom of the main sequence: Rapid rotation and NO H-alpha emission

    NASA Technical Reports Server (NTRS)

    Basri, Gibor; Marcy, Geoffrey W.

    1995-01-01

    We report Kech Observatory high-resolution echelle spectra from 640-850 nm for eight stars near the faint end of the main sequence. These spectra are the highest resolution spectra of such late-type stars, and clearly resolve the TiO, VO, and atomic lines. The sample includes the field brown-dwarf candidate, BRI 0021-0214 (M9.5+). Very unexpectedly, it shows the most rapid rotation in the entire samples, v sin i approximately 40 km/s, which is 20x faster than typical field nonemission M stars. Equally surprising is that BRI 0021 exhibits no emission or absorptionat H-alpha. We argue that this absence is not simply due to its cool photosphere, but that stellar activity declines in a fundamental way at the end of the main sequence. As it is the first very late M dwarf observed at high spectral resolution, BRI 0021 may be signaling a qualitative change in the angular momentum loss rate among the lowest mass stars. Conventionally, its rapid rotation would have marked BRI 0021 as very young, consistent with the selection effect which arises if the latest-type dwarfs are really brown dwarfs on cooling curves. In any case, it is unprecedented to find no sign of stellar activity in such a rapidly rotating convective star. We also discuss the possible conflict between this observation and the extremely strong H-alpha seen in another very cool star, PC 0025+0447. Extrapolation of M-L relations for BRI 0021 yields M approximately 0.065 solar mass, and the other sample objects have expected masses near the H-burning limit. These include two Pleiades brown-dwarf candidates, four field M6 dwarfs and one late-type T Tauri star. The two Pleiades M6 dwarfs have v sin i of 26 and 37 km/s, H-alpha in emission, and radial velocities consistent with Pleiades M6 dwarfs have v sin i of 26 and 37 km/s, H-alpha in emission, and radial velocities consistent with Pleiades membership. Similarly, the late-type T Tauri star has v sin i approximately 30 km/s and H alpha emission indicate of its

  14. The slowly pulsating B-star 18 Pegasi: A testbed for upper main sequence stellar evolution

    NASA Astrophysics Data System (ADS)

    Irrgang, A.; Desphande, A.; Moehler, S.; Mugrauer, M.; Janousch, D.

    2016-06-01

    The predicted width of the upper main sequence in stellar evolution models depends on the empirical calibration of the convective overshooting parameter. Despite decades of discussions, its precise value is still unknown and further observational constraints are required to gauge it. Based on a photometric and preliminary asteroseismic analysis, we show that the mid B-type giant 18 Peg is one of the most evolved members of the rare class of slowly pulsating B-stars and, thus, bears tremendous potential to derive a tight lower limit for the width of the upper main sequence. In addition, 18 Peg turns out to be part of a single-lined spectroscopic binary system with an eccentric orbit that is greater than 6 years. Further spectroscopic and photometric monitoring and a sophisticated asteroseismic investigation are required to exploit the full potential of this star as a benchmark object for stellar evolution theory. Based on observations collected at the European Organisation for Astronomical Research in the Southern Hemisphere under ESO programmes 265.C-5038(A), 069.C-0263(A), and 073.D-0024(A). Based on observations collected at the Centro Astronómico Hispano Alemán (CAHA) at Calar Alto, operated jointly by the Max-Planck Institut für Astronomie and the Instituto de Astrofísica de Andalucía (CSIC), proposals H2005-2.2-016 and H2015-3.5-008. Based on observations made with the William Herschel Telescope operated on the island of La Palma by the Isaac Newton Group in the Spanish Observatorio del Roque de los Muchachos of the Instituto de Astrofísica de Canarias, proposal W15BN015. Based on observations obtained with telescopes of the University Observatory Jena, which is operated by the Astrophysical Institute of the Friedrich-Schiller-University.

  15. The evolution of angular momentum among zero-age main-sequence solar-type stars

    NASA Technical Reports Server (NTRS)

    Soderblom, David R.; Stauffer, John R.; Macgregor, Keith B.; Jones, Burton F.

    1993-01-01

    We consider a survey of rotation among F, G, and K dwarfs of the Pleiades in the context of other young clusters (Alpha Persei and the Hyades) and pre-main-sequence (PMS) stars (in Taurus-Auriga and Orion) in order to examine how the angular momentum of a star like the sun evolves during its early life on the main sequence. The rotation of PMS stars can be evolved into distributions like those seen in the young clusters if there is only modest, rotation-independent angular momentum loss prior to the ZAMS. Even then, the ultrafast rotators (UFRs, or ZAMS G and K dwarfs with v sin i equal to or greater than 30 km/s) must owe their extra angular momentum to their conditions of formation and to different angular momentum loss rates above a threshold velocity, for it is unlikely that these stars had angular momentum added as they neared the ZAMS, nor can a spread in ages within a cluster account for the range of rotation seen. Only a fraction of solar-type stars are thus capable of becoming UFRs, and it is not a phase that all stars experience. Simple scaling relations (like the Skumanich relation) applied to the observed surface rotation rates of young solar-type stars cannot reproduce the way in which the Pleiades evolve into the Hyades. We argue that invoking internal differential rotation in these ZAMS stars can explain several aspects of the observations and thus can provide a consistent picture of ZAMS angular momentum evolution.

  16. Chemically Dissected Rotation Curves of the Galactic Bulge from Main-sequence Proper Motions

    NASA Astrophysics Data System (ADS)

    Clarkson, William I.; Calamida, Annalisa; Sahu, Kailash C.; Brown, Thomas M.; Gennaro, Mario; Avila, Roberto J.; Valenti, Jeff; Debattista, Victor P.; Rich, R. Michael; Minniti, Dante; Zoccali, Manuela; Aufdemberge, Emily R.

    2018-05-01

    We report results from an exploratory study implementing a new probe of Galactic evolution using archival Hubble Space Telescope imaging observations. Precise proper motions are combined with photometric relative metallicity and temperature indices, to produce the proper-motion rotation curves of the Galactic bulge separately for metal-poor and metal-rich main-sequence samples. This provides a “pencil-beam” complement to large-scale wide-field surveys, which to date have focused on the more traditional bright giant branch tracers. We find strong evidence that the Galactic bulge rotation curves drawn from “metal-rich” and “metal-poor” samples are indeed discrepant. The “metal-rich” sample shows greater rotation amplitude and a steeper gradient against line-of-sight distance, as well as possibly a stronger central concentration along the line of sight. This may represent a new detection of differing orbital anisotropy between metal-rich and metal-poor bulge objects. We also investigate selection effects that would be implied for the longitudinal proper-motion cut often used to isolate a “pure-bulge” sample. Extensive investigation of synthetic stellar populations suggests that instrumental and observational artifacts are unlikely to account for the observed rotation curve differences. Thus, proper-motion-based rotation curves can be used to probe chemodynamical correlations for main-sequence tracer stars, which are orders of magnitude more numerous in the Galactic bulge than the bright giant branch tracers. We discuss briefly the prospect of using this new tool to constrain detailed models of Galactic formation and evolution. Based on observations made with the NASA/ESA Hubble Space Telescope and obtained from the data archive at the Space Telescope Science Institute. STScI is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-26555.

  17. Evolution of X-ray activity of 1-3 Msun late-type stars in early post-main-sequence phases

    NASA Astrophysics Data System (ADS)

    Pizzolato, N.; Maggio, A.; Sciortino, S.

    2000-09-01

    We have investigated the variation of coronal X-ray emission during early post-main-sequence phases for a sample of 120 late-type stars within 100 pc, and with estimated masses in the range 1-3 Msun, based on Hipparcos parallaxes and recent evolutionary models. These stars were observed with the ROSAT/PSPC, and the data processed with the Palermo-CfA pipeline, including detection and evaluation of X-ray fluxes (or upper limits) by means of a wavelet transform algorithm. We have studied the evolutionary history of X-ray luminosity and surface flux for stars in selected mass ranges, including stars with inactive A-type progenitors on the main sequence and lower mass solar-type stars. Our stellar sample suggests a trend of increasing X-ray emission level with age for stars with masses M > 1.5 Msun, and a decline for lower-mass stars. A similar behavior holds for the average coronal temperature, which follows a power-law correlation with the X-ray luminosity, independently of their mass and evolutionary state. We have also studied the relationship between X-ray luminosity and surface rotation rate for stars in the same mass ranges, and how this relationships departs from the Lx ~ vrot2 law followed by main-sequence stars. Our results are interpreted in terms of a magnetic dynamo whose efficiency depends on the stellar evolutionary state through the mass-dependent changes of the stellar internal structure, including the properties of envelope convection and the internal rotation profile.

  18. (Fe II) 1.53 and 1.64 micron emission from pre-main-sequence stars

    NASA Technical Reports Server (NTRS)

    Hamann, Fred; Simon, Michal; Carr, John S.; Prato, Lisa

    1994-01-01

    We present flux-calibrated profiles of the (Fe II) 1.53 and 1.64 micron lines in five pre-main-sequence stars, PV Cep, V1331 Cyg, R Mon, and DG and HL Tau. The line centroids are blueshifted in all five sources, and four of the five have only blueshifted flux. In agreement with previous studies, we attribute the line asymmetries to local obscuration by dusty circumstellar disks. The absence of redshifted flux implies a minimum column density of obscuring material. The largest limit, N(sub H) greater than 3 x 10(exp 22)/sq cm, derived for V1331 Cyg, suggests disk surface densities greater than 0.05 g/sq cm and disk masses greater than 0.001 solar mass within a radius of approximately 200 AU. The narrow high-velocity lines in PV Cep, V1331 Cyg, and HL Tau require formation in well collimated winds. The maximum full opening angles of their winds range from less than 20 deg in V1331 Cyg to less than 40 deg in HL Tau. The (Fe II) data also yield estimates of the electron densities (n(sub e) approximately 10(exp 4)/cu cm), hydrogen ionization fractions (f(sub H(+)) approximately 1/3), mass-loss rates (approximately 10(exp -7) to 2 x 10(exp -6) solar mass/yr), and characteristic radii of the emitting regions (approximately 32 to approximately 155 AU). The true radial extents will be larger, and the mass-loss rates smaller, by factors of a few for the outflows with limited opening angles. In our small sample the higher mass stars have stronger lines, larger emitting regions, and greater mass-loss rates. These differences are probably limited to the scale and energetics of the envelopes, because the inferred geometries, kinematics and physical conditions are similar. The measured (Fe II) profiles samples both 'high'- and 'low'-velocity environments. Recent studies indicate that these regions have some distinct physical properties and may be spatially separate. The (Fe II) data show that similar sizes and densities can occur in both environments.

  19. (Fe II) 1.53 and 1.64 micron emission from pre-main-sequence stars

    NASA Astrophysics Data System (ADS)

    Hamann, Fred; Simon, Michal; Carr, John S.; Prato, Lisa

    1994-11-01

    We present flux-calibrated profiles of the (Fe II) 1.53 and 1.64 micron lines in five pre-main-sequence stars, PV Cep, V1331 Cyg, R Mon, and DG and HL Tau. The line centroids are blueshifted in all five sources, and four of the five have only blueshifted flux. In agreement with previous studies, we attribute the line asymmetries to local obscuration by dusty circumstellar disks. The absence of redshifted flux implies a minimum column density of obscuring material. The largest limit, NH greater than 3 x 1022/sq cm, derived for V1331 Cyg, suggests disk surface densities greater than 0.05 g/sq cm and disk masses greater than 0.001 solar mass within a radius of approximately 200 AU. The narrow high-velocity lines in PV Cep, V1331 Cyg, and HL Tau require formation in well collimated winds. The maximum full opening angles of their winds range from less than 20 deg in V1331 Cyg to less than 40 deg in HL Tau. The (Fe II) data also yield estimates of the electron densities (ne approximately 104/cu cm), hydrogen ionization fractions (fH(+) approximately 1/3), mass-loss rates (approximately 10-7 to 2 x 10-6 solar mass/yr), and characteristic radii of the emitting regions (approximately 32 to approximately 155 AU). The true radial extents will be larger, and the mass-loss rates smaller, by factors of a few for the outflows with limited opening angles. In our small sample the higher mass stars have stronger lines, larger emitting regions, and greater mass-loss rates. These differences are probably limited to the scale and energetics of the envelopes, because the inferred geometries, kinematics and physical conditions are similar. The measured (Fe II) profiles samples both 'high'- and 'low'-velocity environments. Recent studies indicate that these regions have some distinct physical properties and may be spatially separate. The (Fe II) data show that similar sizes and densities can occur in both environments.

  20. Molecules and dust in the Large Magellanic Cloud: new colour classifications for post-Main-Sequence stars

    NASA Astrophysics Data System (ADS)

    Markwick-Kemper, Ciska; Leisenring, Jarron; Meixner, Margaret; van Dyk, Schuyler; Szczerba, Ryszard

    In the Large Magellanic Cloud (LMC), as in the Milky Way, dust formation predominantly occurs in the circumstellar environments of evolved stars. The process of dust condensation is not fully understood, and investigating the dust condensation sequence in the low metallicity environment of the LMC (about half of the solar metallicity), may yield additional insights in the dust condensation process. Topics to be studied include the final condensation products, the correlation of the condensation sequence with evolutionary status of the star, degree of crystallinity of the silicates and ratio of carbon-rich dust producing stars. The composition and properties of dust are most easily studied using infrared spectroscopy, and using the high sensitivity of the Infrared Spectrograph (IRS) on board of Spitzer, we were able to observe the thermal emission from circumstellar dust of these stars individually. A sample of 63 post-Main-Sequence stars were selected, using their 2MASS/MSX colours (Egan et al. 2001). We aimed to cover all post-Main-Sequence evolutionary stages, to make an inventory of the dust condensation products, while we placed a certain emphasis on oxygen-rich AGB stars with a intermediate mass-loss rate, to study the existence of a threshold mass-loss rate above which crystalline silicates are observed (Kemper et al. 2001). Here we will present the observed spectra, along with their spectral classification. We find that a large fraction of the stars we observed exhibit spectral features of carbon-rich dust and molecules, such as SiC, C2H2 and MgS. In fact we find that many of these stars are previously classified as oxygen-rich AGB stars, or as OH/IR stars based on their NIR/MIR colours (Egan et al. 2001). These colours are determined for Galactic samples, while in the LMC sample, stars with a carbon-rich chemistry in their outflows occupy a much larger region of the various colour-colour diagrams. In addition, a large fraction of the sample show amorphous

  1. Extended main sequence turnoffs in intermediate-age star clusters: a correlation between turnoff width and early escape velocity

    SciTech Connect

    Goudfrooij, Paul; Kozhurina-Platais, Vera; Kalirai, Jason S.

    2014-12-10

    We present a color-magnitude diagram analysis of deep Hubble Space Telescope imaging of a mass-limited sample of 18 intermediate-age (1-2 Gyr old) star clusters in the Magellanic Clouds, including eight clusters for which new data were obtained. We find that all star clusters in our sample feature extended main-sequence turnoff (eMSTO) regions that are wider than can be accounted for by a simple stellar population (including unresolved binary stars). FWHM widths of the MSTOs indicate age spreads of 200-550 Myr. We evaluate the dynamical evolution of clusters with and without initial mass segregation. Our main results are (1) the fractionmore » of red clump (RC) stars in secondary RCs in eMSTO clusters scales with the fraction of MSTO stars having pseudo-ages of ≲1.35 Gyr; (2) the width of the pseudo-age distributions of eMSTO clusters is correlated with their central escape velocity v {sub esc}, both currently and at an age of 10 Myr. We find that these two results are unlikely to be reproduced by the effects of interactive binary stars or a range of stellar rotation velocities. We therefore argue that the eMSTO phenomenon is mainly caused by extended star formation within the clusters; and (3) we find that v {sub esc} ≥ 15 km s{sup –1} out to ages of at least 100 Myr for all clusters featuring eMSTOs, and v {sub esc} ≤ 12 km s{sup –1} at all ages for two lower-mass clusters in the same age range that do not show eMSTOs. We argue that eMSTOs only occur for clusters whose early escape velocities are higher than the wind velocities of stars that provide material from which second-generation stars can form. The threshold of 12-15 km s{sup –1} is consistent with wind velocities of intermediate-mass asymptotic giant branch stars and massive binary stars in the literature.« less

  2. Return to [Log-]Normalcy: Rethinking Quenching, The Star Formation Main Sequence, and Perhaps Much More

    NASA Astrophysics Data System (ADS)

    Abramson, Louis E.; Gladders, Michael D.; Dressler, Alan; Oemler, Augustus, Jr.; Poggianti, Bianca; Vulcani, Benedetta

    2016-11-01

    Knowledge of galaxy evolution rests on cross-sectional observations of different objects at different times. Understanding of galaxy evolution rests on longitudinal interpretations of how these data relate to individual objects moving through time. The connection between the two is often assumed to be clear, but we use a simple “physics-free” model to show that it is not and that exploring its nuances can yield new insights. Comprising nothing more than 2094 loosely constrained lognormal star formation histories (SFHs), the model faithfully reproduces the following data it was not designed to match: stellar mass functions at z≤slant 8; the slope of the star formation rate/stellar mass relation (the SFR “Main Sequence”) at z≤slant 6; the mean {sSFR}(\\equiv {SFR}/{M}* ) of low-mass galaxies at z≤slant 7; “fast-” and “slow-track” quenching; downsizing; and a correlation between formation timescale and {sSFR}({M}* ,t) similar to results from simulations that provides a natural connection to bulge growth. We take these findings—which suggest that quenching is the natural downturn of all SFHs affecting galaxies at rates/times correlated with their densities—to mean that: (1) models in which galaxies are diversified on Hubble timescales by something like initial conditions rival the dominant grow-and-quench framework as good descriptions of the data; or (2) absent spatial information, many metrics of galaxy evolution are too undiscriminating—if not inherently misleading—to confirm a unique explanation. We outline future tests of our model but stress that, even if ultimately incorrect, it illustrates how exploring different paradigms can aid learning and, we hope, more detailed modeling efforts.

  3. The Evolution of Rotation and Activity in Young Open Clusters: the Zero-Age Main Sequence.

    NASA Astrophysics Data System (ADS)

    Patten, Brian Michael

    1995-01-01

    I have undertaken a program of ground- and space -based observations to measure photometric rotation periods and X-ray luminosities for late-type stars in the young open clusters IC 2391 and IC 2602. With cluster ages of ~30 Myr, IC 2391 and IC 2602 are ideal sites in which to observe conditions at the ZAMS since the solar-type stars in these clusters have not been on the main sequence long enough to undergo significant magnetic braking. The ROSAT survey of IC 2391 revealed 80 X-ray sources, 44 of which were found to be associated with stars which are now classified as new cluster members. Among the solar-type stars in both IC 2391 and IC 2602, I find a factor of ~25 spread in the distribution of rotation periods, which range from 0.21 to 4.86 day. I also find a factor of ~10-20 spread in the range of LX about a median LX value of ~10^{30 } erg s^{-1} for both clusters. These results show conclusively that stars arrive on the ZAMS with a wide range of rotation rates and coronal activity levels. When compared to data from older clusters, such as the Pleiades and the Hyades, there is an overall decline observed in both the rotation rates and median X-ray luminosity of cluster members with increasing age, however, while the spread in the range of rotation rates decreases to a small value, the spread in the range of LX values as a fraction of the median is observed to increase with age. This behavior is best explained through a dependence of LX on P rot which is weak in the young clusters and strong in the older clusters. The Rossby diagram shows there is a tight correlation between L X/Lbol and the Rossby number, Prot divided by the convective turnover time. Young, rapidly rotating, main sequence stars lie along a plateau of magnetic saturation, where LX has a weak dependence on rotation period, while older, more slowly rotating stars lie in a region on the Rossby diagram where LX has a strong dependence on rotation period.

  4. Delayed Gratification Habitable Zones: When Deep Outer Solar System Regions Become Balmy During Post-Main Sequence Stellar Evolution

    NASA Astrophysics Data System (ADS)

    Stern, S. Alan

    2003-06-01

    Like all low- and moderate-mass stars, the Sun will burn as a red giant during its later evolution, generating of solar luminosities for some tens of millions of years. During this post-main sequence phase, the habitable (i.e., liquid water) thermal zone of our Solar System will lie in the region where Triton, Pluto-Charon, and Kuiper Belt objects orbit. Compared with the 1 AU habitable zone where Earth resides, this "delayed gratification habitable zone" (DGHZ) will enjoy a far less biologically hazardous environment - with lower harmful radiation levels from the Sun, and a far less destructive collisional environment. Objects like Triton, Pluto-Charon, and Kuiper Belt objects, which are known to be rich in both water and organics, will then become possible sites for biochemical and perhaps even biological evolution. The Kuiper Belt, with >105 objects >=50 km in radius and more than three times the combined surface area of the four terrestrial planets, provides numerous sites for possible evolution once the Sun's DGHZ reaches it. The Sun's DGHZ might be thought to only be of academic interest owing to its great separation from us in time. However, ~109 Milky Way stars burn as luminous red giants today. Thus, if icy-organic objects are common in the 20-50 AU zones of these stars, as they are in our Solar System (and as inferred in numerous main sequence stellar disk systems), then DGHZs may form a niche type of habitable zone that is likely to be numerically common in the Galaxy.

  5. Delayed gratification habitable zones: when deep outer solar system regions become balmy during post-main sequence stellar evolution.

    PubMed

    Stern, S Alan

    2003-01-01

    Like all low- and moderate-mass stars, the Sun will burn as a red giant during its later evolution, generating of solar luminosities for some tens of millions of years. During this post-main sequence phase, the habitable (i.e., liquid water) thermal zone of our Solar System will lie in the region where Triton, Pluto-Charon, and Kuiper Belt objects orbit. Compared with the 1 AU habitable zone where Earth resides, this "delayed gratification habitable zone" (DGHZ) will enjoy a far less biologically hazardous environment - with lower harmful radiation levels from the Sun, and a far less destructive collisional environment. Objects like Triton, Pluto-Charon, and Kuiper Belt objects, which are known to be rich in both water and organics, will then become possible sites for biochemical and perhaps even biological evolution. The Kuiper Belt, with >10(5) objects > or =50 km in radius and more than three times the combined surface area of the four terrestrial planets, provides numerous sites for possible evolution once the Sun's DGHZ reaches it. The Sun's DGHZ might be thought to only be of academic interest owing to its great separation from us in time. However, approximately 10(9) Milky Way stars burn as luminous red giants today. Thus, if icy-organic objects are common in the 20-50 AU zones of these stars, as they are in our Solar System (and as inferred in numerous main sequence stellar disk systems), then DGHZs may form a niche type of habitable zone that is likely to be numerically common in the Galaxy.

  6. Soft X-ray observations of pre-main sequence stars in the chamaeleon dark cloud

    NASA Technical Reports Server (NTRS)

    Feigelson, Eric D.; Kriss, Gerard A.

    1987-01-01

    Einstein IPC observations of the nearby Chamaeleon I star forming cloud show 22 well-resolved soft X-ray sources in a 1x2 deg region. Twelve are associated with H-alpha emission line pre-main sequence (PMS) stars, and four with optically selected PMS stars. Several X-ray sources have two or more PMS stars in their error circles. Optical spectra were obtained at CTIO of possible stellar counterparts of the remaining X-ray sources. They reveal 5 probable new cloud members, K7-MO stars with weak or absent emission lines. These naked X-ray selected PMS stars are similar to those found in the Taurus-Auriga cloud. The spatial distributions and H-R diagrams of the X-ray and optically selected PMS stars in the cloud are very similar. Luminosity functions indicate the Chamaeleon stars are on average approximately 5 times more X-ray luminous than Pleiad dwarfs. A significant correlation between L sub x and optical magnitude suggests this trend may continue within the PMS phase of stellar evolution. The relation of increasing X-ray luminosity with decreasing stellar ages is thus extended to stellar ages as young as 1 million years.

  7. Absolute Ages and Distances of 22 GCs Using Monte Carlo Main-sequence Fitting

    NASA Astrophysics Data System (ADS)

    O'Malley, Erin M.; Gilligan, Christina; Chaboyer, Brian

    2017-04-01

    The recent Gaia Data Release 1 of stellar parallaxes provides ample opportunity to find metal-poor main-sequence stars with precise parallaxes. We select 21 such stars with parallax uncertainties better than σ π /π ≤ 0.10 and accurate abundance determinations suitable for testing metal-poor stellar evolution models and determining the distance to Galactic globular clusters (GCs). A Monte Carlo analysis was used, taking into account uncertainties in the model construction parameters, to generate stellar models and isochrones to fit to the calibration stars. The isochrones that fit the calibration stars best were then used to determine the distances and ages of 22 GCs with metallicities ranging from -2.4 dex to -0.7 dex. We find distances with an average uncertainty of 0.15 mag and absolute ages ranging from 10.8 to 13.6 Gyr with an average uncertainty of 1.6 Gyr. Using literature proper motion data, we calculate orbits for the clusters, finding six that reside within the Galactic disk/bulge, while the rest are considered halo clusters. We find no strong evidence for a relationship between age and Galactocentric distance, but we do find a decreasing age-[Fe/H] relation.

  8. Determination of the fundamental properties of an M31 globular cluster from main-sequence photometry

    NASA Astrophysics Data System (ADS)

    Ma, Jun

    2013-02-01

    We determined the age of the M31 globular cluster B379 using isochrones of the Padova stellar evolutionary models. At the same time, the cluster's metal abundance, its distance modulus, and reddening value were also obtained. The results obtained in this paper are consistent with previous determinations, including the age. Brown et al. constrained the age of B379 by comparing its color-magnitude diagram with isochrones of the 2006 VandenBerg models. Therefore, this paper confirms the consistency of the age scale of B379 between the Padova isochrones and the 2006 VandenBerg isochrones. The results of B379 obtained in this paper are: metallicity [M/H] = log(Z/Z⊙) = -0.325 dex, age τ = 11.0 +/- 1.5 Gyr, reddening E(B - V) = 0.08 mag, and distance modulus (m - M)0 = 24.44 +/- 0.10 mag. Using the metallicity, the reddening value and the distance modulus obtained in this paper, we constrained the age of B379 by comparing its multicolor photometry with theoretical stellar population synthesis models. The age of B379 obtained is 10.6-0.76 +0.92 Gyr, which is in very good agreement with the determination from main-sequence photometry.

  9. Galactic ΔY/ΔZ from the analysis of solar neighborhood main sequence stars

    NASA Astrophysics Data System (ADS)

    Gennaro, M.; Moroni, P. G. Prada; Degl'Innocenti, S.

    2009-05-01

    We discuss the reliability of one of the most used method to determine the helium-to-metals enrichment ratio (ΔY/ΔZ), i.e. the photometric comparison of a selected data set of local disk low main sequence (MS) stars observed by Hipparcos with a new grid of stellar models with up-to-date input physics. Most of the attention has been devoted to evaluate the effects on the final results of different sources of uncertainty (observational errors, evolutionary effects, selection criteria, systematic uncertainties of the models, numerical errors). As a check of the result the procedure has been repeated using another, independent, data set: the low-MS of the Hyades cluster. The obtained ΔY/ΔZ for the Hyades, together with spectroscopic determinations of [Fe/H] ratio, have been used to obtain the Y and Z values for the cluster. Isochrones have been calculated with the estimated chemical composition, obtaining a very good agreement between the predicted position of the Hyades MS and the observational data in the color-magnitude diagram.

  10. MAGNETIC ACTIVITY ANALYSIS FOR A SAMPLE OF G-TYPE MAIN SEQUENCE KEPLER TARGETS

    SciTech Connect

    Mehrabi, Ahmad; He, Han; Khosroshahi, Habib, E-mail: mehrabi@basu.ac.ir

    2017-01-10

    The variation of a stellar light curve owing to rotational modulation by magnetic features (starspots and faculae) on the star’s surface can be used to investigate the magnetic properties of the host star. In this paper, we use the periodicity and magnitude of the light-curve variation as two proxies to study the stellar magnetic properties for a large sample of G-type main sequence Kepler targets, for which the rotation periods were recently determined. By analyzing the correlation between the two magnetic proxies, it is found that: (1) the two proxies are positively correlated for most of the stars in ourmore » sample, and the percentages of negative, zero, and positive correlations are 4.27%, 6.81%, and 88.91%, respectively; (2) negative correlation stars cannot have a large magnitude of light-curve variation; and (3) with the increase of rotation period, the relative number of positive correlation stars decreases and the negative correlation one increases. These results indicate that stars with shorter rotation period tend to have positive correlation between the two proxies, and a good portion of the positive correlation stars have a larger magnitude of light-curve variation (and hence more intense magnetic activities) than negative correlation stars.« less

  11. A search for pre-main sequence stars in the high-latitude molecular clouds. II - A survey of the Einstein database

    NASA Technical Reports Server (NTRS)

    Caillault, Jean-Pierre; Magnani, Loris

    1990-01-01

    The preliminary results are reported of a survey of every EINSTEIN image which overlaps any high-latitude molecular cloud in a search for X-ray emitting pre-main sequence stars. This survey, together with complementary KPNO and IRAS data, will allow the determination of how prevalent low mass star formation is in these clouds in general and, particularly, in the translucent molecular clouds.

  12. ON THE RELIABILITY OF STELLAR AGES AND AGE SPREADS INFERRED FROM PRE-MAIN-SEQUENCE EVOLUTIONARY MODELS

    SciTech Connect

    Hosokawa, Takashi; Offner, Stella S. R.; Krumholz, Mark R., E-mail: Takashi.Hosokawa@jpl.nasa.gov, E-mail: hosokwtk@gmail.com

    2011-09-10

    We revisit the problem of low-mass pre-main-sequence stellar evolution and its observational consequences for where stars fall on the Hertzsprung-Russell diagram (HRD). In contrast to most previous work, our models follow stars as they grow from small masses via accretion, and we perform a systematic study of how the stars' HRD evolution is influenced by their initial radius, by the radiative properties of the accretion flow, and by the accretion history, using both simple idealized accretion histories and histories taken from numerical simulations of star cluster formation. We compare our numerical results to both non-accreting isochrones and to the positionsmore » of observed stars in the HRD, with a goal of determining whether both the absolute ages and the age dispersions inferred from non-accreting isochrones are reliable. We show that non-accreting isochrones can sometimes overestimate stellar ages for more massive stars (those with effective temperatures above {approx}3500 K), thereby explaining why non-accreting isochrones often suggest a systematic age difference between more and less massive stars in the same cluster. However, we also find the only way to produce a similar overestimate for the ages of cooler stars is if these stars grow from {approx}0.01 M{sub sun} seed protostars that are an order of magnitude smaller than predicted by current theoretical models, and if the size of the seed protostar correlates systematically with the final stellar mass at the end of accretion. We therefore conclude that, unless both of these conditions are met, inferred ages and age spreads for cool stars are reliable, at least to the extent that the observed bolometric luminosities and temperatures are accurate. Finally, we note that the time dependence of the mass accretion rate has remarkably little effect on low-mass stars' evolution on the HRD, and that such time dependence may be neglected for all stars except those with effective temperatures above {approx}4000

  13. Time Variability of the Dust Sublimation Zones in Pre-Main Sequence Disk Systems

    NASA Technical Reports Server (NTRS)

    Sitko, Michael L.; Carpenter, W. J.; Grady, C. A.; Russel, R. W.; Lynch, D. K.; Rudy, R. J.; Mazuk, S. M.; Venturini, C. C.; Kimes, R. L.; Beerman, L. C.; hide

    2007-01-01

    The dust sublimation zone (DSZ) is the region of pre-main sequence (PMS) disks where dust grains most easily anneal, sublime, and condense out of the gas. Because of this, it is a location where crystalline material may be enhanced and redistributed throughout the rest of the disk. A decade-long program to monitor the thermal emission of the grains located in this region demonstrates that large changes in emitted flux occur in many systems. Changes in the thermal emission between 3 and 13.5 microns were observed in HD 31648 (MWC 480), HD 163296 (MWC 275), and DG Tau. This emission is consistent with it being produced at the DSZ, where the transition from a disk of gas to one of gas+dust occurs. In the case of DG Tau, the outbursts were accompanied by increased emission on the 10 micron silicate band on one occasion, while on another occasion it went into absorption. This requires lofting of the material above the disk into the line of sight. Such changes will affect the determination of the inner disk structure obtained through interferometry measurements, and this has been confirmed in the case of HD 163296. Cyclic variations in the heating of the DSZ will lead to the annealing of large grains, the sublimation of smaller grains, possibly followed by re-condensation as the zone enters a cooling phase. Lofting of dust above the disk plane, and outward acceleration by stellar winds and radiation pressure, can re-distribute the processed material to cooler regions of the disk, where cometesimals form. This processing is consistent with the detection of the preferential concentration of large crystalline grains in the inner few AU of PMS disks using interferometric spectroscopy with the VLTI.

  14. A DETAILED FAR-ULTRAVIOLET SPECTRAL ATLAS OF MAIN-SEQUENCE B STARS

    SciTech Connect

    Smith, Myron A.

    2010-02-01

    We have constructed a detailed spectral atlas covering the wavelength region 930-1225 A for 10 sharp-lined B0-B9 stars near the main sequence. Most of the spectra we assembled are from the archives of the Far Ultraviolet Spectroscopic Explorer satellite, but for nine stars, wavelength coverage above 1188 A was taken from high-resolution International Ultraviolet Explorer or echelle Hubble Space Telescope/Space Telescope Imaging Spectrograph spectra. To represent the tenth star at type B0.2 V, we used the Copernicus atlas of {tau} Sco. We made extensive line identifications in the region 949-1225 A of all atomic features having published oscillator strengths atmore » types B0, B2, and B8. These are provided as a supplementary data product-hence the term detailed atlas. Our list of found features totals 2288, 1612, and 2469 lines, respectively. We were able to identify 92%, 98%, and 98% of these features with known atomic transitions with varying degrees of certainty in these spectra. The remaining lines do not have published oscillator strengths. Photospheric lines account for 94%, 87%, and 91%, respectively, of all our identifications, with the remainder being due to interstellar (usually molecular H{sub 2}) lines. We also discuss the numbers of lines with respect to the distributions of various ions for these three most studied spectral subtypes. A table is also given of 162 least blended lines that can be used as possible diagnostics of physical conditions in B star atmospheres.« less

  15. Linear Relation for Wind-blown Bubble Sizes of Main-sequence OB Stars in a Molecular Environment and Implication for Supernova Progenitors

    NASA Astrophysics Data System (ADS)

    Chen, Yang; Zhou, Ping; Chu, You-Hua

    2013-05-01

    We find a linear relationship between the size of a massive star's main-sequence bubble in a molecular environment and the star's initial mass: R b ≈ 1.22 M/M ⊙ - 9.16 pc, assuming a constant interclump pressure. Since stars in the mass range of 8 to 25-30 M ⊙ will end their evolution in the red supergiant phase without launching a Wolf-Rayet wind, the main-sequence wind-blown bubbles are mainly responsible for the extent of molecular gas cavities, while the effect of the photoionization is comparatively small. This linear relation can thus be used to infer the masses of the massive star progenitors of supernova remnants (SNRs) that are discovered to evolve in molecular cavities, while few other means are available for inferring the properties of SNR progenitors. We have used this method to estimate the initial masses of the progenitors of eight SNRs: Kes 69, Kes 75, Kes 78, 3C 396, 3C 397, HC 40, Vela, and RX J1713-3946.

  16. The environmental impacts on the star formation main sequence: An Hα study of the newly discovered rich cluster at z = 1.52

    SciTech Connect

    Koyama, Yusei; Kodama, Tadayuki; Tadaki, Ken-ichi

    2014-07-01

    We report the discovery of a strong over-density of galaxies in the field of a radio galaxy at z = 1.52 (4C 65.22) based on our broadband and narrow-band (Hα) photometry with the Subaru Telescope. We find that Hα emitters are located in the outskirts of the density peak (cluster core) dominated by passive red-sequence galaxies. This resembles the situation in lower-redshift clusters, suggesting that the newly discovered structure is a well-evolved rich galaxy cluster at z = 1.5. Our data suggest that the color-density and stellar mass-density relations are already in place at z ∼ 1.5, mostly driven bymore » the passive red massive galaxies residing within r{sub c} ≲ 200 kpc from the cluster core. These environmental trends almost disappear when we consider only star-forming (SF) galaxies. We do not find SFR-density or SSFR-density relations amongst SF galaxies, and the location of the SF main sequence does not significantly change with environment. Nevertheless, we find a tentative hint that star-bursting galaxies (up-scattered objects from the main sequence) are preferentially located in a small group at ∼1 Mpc away from the main body of the cluster. We also argue that the scatter of the SF main sequence could be dependent on the distance to the nearest neighboring galaxy.« less

  17. Statistical theory for protein combinatorial libraries. Packing interactions, backbone flexibility, and the sequence variability of a main-chain structure.

    PubMed

    Kono, H; Saven, J G

    2001-02-23

    Combinatorial experiments provide new ways to probe the determinants of protein folding and to identify novel folding amino acid sequences. These types of experiments, however, are complicated both by enormous conformational complexity and by large numbers of possible sequences. Therefore, a quantitative computational theory would be helpful in designing and interpreting these types of experiment. Here, we present and apply a statistically based, computational approach for identifying the properties of sequences compatible with a given main-chain structure. Protein side-chain conformations are included in an atom-based fashion. Calculations are performed for a variety of similar backbone structures to identify sequence properties that are robust with respect to minor changes in main-chain structure. Rather than specific sequences, the method yields the likelihood of each of the amino acids at preselected positions in a given protein structure. The theory may be used to quantify the characteristics of sequence space for a chosen structure without explicitly tabulating sequences. To account for hydrophobic effects, we introduce an environmental energy that it is consistent with other simple hydrophobicity scales and show that it is effective for side-chain modeling. We apply the method to calculate the identity probabilities of selected positions of the immunoglobulin light chain-binding domain of protein L, for which many variant folding sequences are available. The calculations compare favorably with the experimentally observed identity probabilities.

  18. Rotation-induced YORP break-up of small bodies to produce post-main-sequence debris

    NASA Astrophysics Data System (ADS)

    Veras, D.; Jacobson, S. A.; Gänsicke, B. T.

    2017-09-01

    We hypothesize that the in situ break-up of small bodies such as asteroids spun to fission during the giant branch phases of stellar evolution provides an important contribution to the debris orbiting and ultimately polluting white dwarfs. The YORP (Yarkovsky-O'Keefe-Radviesvki-Paddock) effect, which arises from radiation pressure, accelerates the spin rate of asymmetric asteroids, which can eventually shear themselves apart. This pressure is maintained and enhanced around dying stars because the outward push of an asteroid due to stellar mass loss is insignificant compared to the resulting stellar luminosity increase. Consequently, giant star radiation will destroy nearly all bodies with radii in the range 100 m-10 km that survive their parent star's main-sequence lifetime within a distance of about 7 au; smaller bodies are spun apart to their strongest, competent components. This estimate is conservative and would increase for highly asymmetric shapes or incorporation of the inward drag due to giant star stellar wind. The resulting debris field, which could extend to thousands of au, may be perturbed by remnant planetary systems to reproduce the observed dusty and gaseous discs which accompany polluted white dwarfs.

  19. Evidence for a Significant Intermediate-Age Population in the M31 Halo from Main Sequence Photometry

    NASA Technical Reports Server (NTRS)

    Brown, Thomas M.; Ferguson, Henry C.; Smith, Ed; Kimble, Randy A.; Sweigart, Allen V.; Renzini, Alvio; Rich, R. Michael; Vandenberg, Don A.

    2003-01-01

    We present a color-magnitude diagram (CMD) for a minor-axis field in the halo of the Andromeda galaxy (M3l), 51 arcmin (11 kpc) from the nucleus. These observations, taken with the Advanced Camera for Surveys (ACS) on the Hubble Space Telescope, are the deepest optical images yet obtained, attaining 50% completeness at m(sub v) = 30.7 mag. The CMD, constructed from approx. 3 x 10(exp 5) stars, reaches more than 1.5 mag fainter than the old main-sequence turnoff. Our analysis is based on direct comparisons to ACS observations of four globular clusters through the same filters, as well as chi square fitting to a finely-spaced grid of calibrated stellar-population models. We find that the M31 halo contains a major (approx. 30% by mass) intermediate-age (6-8 Gyr) metal-rich ([Fe/H] greater than -0.5) population, as well as a significant globular-cluster age (11-13.5 Gyr) metal-poor population. These findings support the idea that galaxy mergers played an important role in the formation of the M31 halo.

  20. Time-series Photometry of the Pre-Main Sequence Binary V4046 Sgr: Testing the Accretion Stream Theory

    NASA Astrophysics Data System (ADS)

    Tofflemire, Benjamin M.; Mathieu, Robert D.; Ardila, David R.; Ciardi, David R.

    2015-01-01

    Most stars are born in binaries, and the evolution of protostellar disks in pre-main sequence (PMS) binary stars is a current frontier of star formation research. PMS binary stars can have up to three accretion disks: two circumstellar disks and a circumbinary disk separated by a dynamically cleared gap. Theory suggests that mass may periodically flow in an accretion stream from a circumbinary disk across the gap onto circumstellar disks or stellar surfaces. Thus, accretion in PMS binaries is controlled by not only radiation, disk viscosity, and magnetic fields, but also by orbital dynamics.As part of a larger, ongoing effort to characterize mass accretion in young binary systems, we test the predictions of the binary accretion stream theory through continuous, multi-orbit, multi-color optical and near-infrared (NIR) time-series photometry. Observations such as these are capable of detecting and characterizing these modulated accretion streams, if they are generally present. Broad-band blue and ultraviolet photometry trace the accretion luminosity and photospheric temperature while NIR photometry provide a measurement of warm circumstellar material, all as a function of orbital phase. The predicted phase and magnitude of enhanced accretion are highly dependent on the binary orbital parameters and as such, our campaign focuses on 10 PMS binaries of varying periods and eccentricities. Here we present multi-color optical (U, B,V, R), narrowband (Hα), and multi-color NIR (J, H) lightcurves of the PMS binary V4046 Sgr (P=2.42 days) obtained with the SMARTS 1.3m telescope and LCOGT 1m telescope network. These results act to showcase the quality and breadth of data we have, or are currently obtaining, for each of the PMS binaries in our sample. With the full characterization of our sample, these observations will guide an extension of the accretion paradigm from single young stars to multiple systems.

  1. Kepler-4b: A Hot Neptune-like Planet of a G0 Star Near Main-sequence Turnoff

    NASA Astrophysics Data System (ADS)

    Borucki, William J.; Koch, David G.; Brown, Timothy M.; Basri, Gibor; Batalha, Natalie M.; Caldwell, Douglas A.; Cochran, William D.; Dunham, Edward W.; Gautier, Thomas N., III; Geary, John C.; Gilliland, Ronald L.; Howell, Steve B.; Jenkins, Jon M.; Latham, David W.; Lissauer, Jack J.; Marcy, Geoffrey W.; Monet, David; Rowe, Jason F.; Sasselov, Dimitar

    2010-04-01

    Early time-series photometry from NASA's Kepler spacecraft has revealed a planet transiting the star we term Kepler-4, at R.A. = 19h02m27.s68, δ = +50°08'08farcs7. The planet has an orbital period of 3.213 days and shows transits with a relative depth of 0.87 × 10-3 and a duration of about 3.95 hr. Radial velocity (RV) measurements from the Keck High Resolution Echelle Spectrometer show a reflex Doppler signal of 9.3+1.1 -1.9 m s-1, consistent with a low-eccentricity orbit with the phase expected from the transits. Various tests show no evidence for any companion star near enough to affect the light curve or the RVs for this system. From a transit-based estimate of the host star's mean density, combined with analysis of high-resolution spectra, we infer that the host star is near turnoff from the main sequence, with estimated mass and radius of 1.223+0.053 -0.091 M sun and 1.487+0.071 -0.084 R sun. We estimate the planet mass and radius to be {M P, R P} = {24.5 ± 3.8 M ⊕, 3.99 ± 0.21 R ⊕}. The planet's density is near 1.9 g cm-3 it is thus slightly denser and more massive than Neptune, but about the same size. Some of the data presented herein were obtained at the W. M. Keck Observatory, which is operated as a scientific partnership among the California Institute of Technology, the University of California, and the National Aeronautics and Space Administration. The Observatory was made possible by the generous financial support of the W. M. Keck Foundation.

  2. Tracing the potential planet-forming regions around seven pre-main-sequence stars

    NASA Astrophysics Data System (ADS)

    Schegerer, A. A.; Wolf, S.; Hummel, C. A.; Quanz, S. P.; Richichi, A.

    2009-07-01

    Aims: We investigate the nature of the innermost regions with radii of several AUs of seven circumstellar disks around pre-main-sequence stars, T Tauri stars in particular. Our object sample contains disks apparently at various stages of their evolution. Both single stars and spatially resolved binaries are considered. In particular, we search for inner disk gaps as proposed for several young stellar objects (YSOs). When analyzing the underlying dust population in the atmosphere of circumstellar disks, the shape of the 10 μm feature should additionally be investigated. Methods: We performed interferometric observations in N band (8-13 μm) with the Mid-Infrared Interferometric Instrument (MIDI) at the Very Large Telescope Interferometer (VLTI) using baseline lengths of between 54 m and 127 m. The data analysis is based on radiative-transfer simulations using the Monte Carlo code MC3D by modeling simultaneously the spectral energy distribution (SED), N band spectra, and interferometric visibilities. Correlated and uncorrelated N band spectra are compared to investigate the radial distribution of the dust composition of the disk atmosphere. Results: Spatially resolved mid-infrared (MIR) emission was detected in all objects. For four objects (DR Tau, RU Lup, S CrA N, and S CrA S), the observed N band visibilities and corresponding SEDs could be simultaneously simulated using a parameterized active disk-model. For the more evolved objects of our sample, HD 72106 and HBC 639, a purely passive disk-model provides the closest fit. The visibilities inferred for the source RU Lup allow the presence of an inner disk gap. For the YSO GW Ori, one of two visibility measurements could not be simulated by our modeling approach. All uncorrelated spectra reveal the 10 μm silicate emission feature. In contrast to this, some correlated spectra of the observations of the more evolved objects do not show this feature, indicating a lack of small silicates in the inner versus the outer

  3. An Observational Study of Accretion Dynamics in Short-Period Pre-Main Sequence Binaries

    NASA Astrophysics Data System (ADS)

    Tofflemire, Benjamin; Mathieu, Robert; Herczeg, Greg; Johns-Krull, Christopher; Akeson, Rachel; Ciardi, David

    2018-01-01

    Over the past thirty years, a detailed picture of star formation has emerged that highlights the importance of the interaction between a pre-main sequence (pre-MS) star and its protoplanetary disk. The properties of an emergent star, the lifetime of a protoplanetary disk, and the formation of planets are all, in part, determined by this star-disk interaction. Many stars, however, form in binary or higher-order systems where orbital dynamics are capable of fundamentally altering this star-disk interaction. Orbital resonances, especially in short-period systems, are capable of clearing the central region of a protoplanetary disk, leaving the possibility for three stable accretion disks: a circumstellar disk around each star and a circumbinary disk. In this model, accretion onto the stars is predicted to proceed in periodic streams that form at the inner edge of the circumbinary disk, cross the dynamically cleared gap, and feed circumstellar disks or accrete directly onto the stars themselves. This pulsed-accretion paradigm predicts bursts of accretion that are periodic with the orbital period, where the duration, amplitude, location in orbital phase, and which star if preferentially fed, all depend on the orbital parameters. To test these predictions, we have carried out intensive observational campaigns combining time-series, optical and near-infrared photometry with time-series, optical spectroscopy. These data are capable of monitoring the stellar accretion rate, the properties of warm circumstellar dust, and the kinematics of accretion flows, all as a function of orbital phase. In our sample of 9 pre-MS binaries with diverse orbital parameters, we search for evidence of periodic accretion events and seek to determine the role orbital parameters have on the characteristics of accretion events. Two results from our campaign will be highlighted: 1) the detection of periodic pulsed accretion events in DQ Tau and TWA 3A, and 2) evidence that the TWA 3A primary is the

  4. ALMA observations of α Centauri. First detection of main-sequence stars at 3 mm wavelength

    NASA Astrophysics Data System (ADS)

    Liseau, R.; Vlemmings, W.; Bayo, A.; Bertone, E.; Black, J. H.; del Burgo, C.; Chavez, M.; Danchi, W.; De la Luz, V.; Eiroa, C.; Ertel, S.; Fridlund, M. C. W.; Justtanont, K.; Krivov, A.; Marshall, J. P.; Mora, A.; Montesinos, B.; Nyman, L.-A.; Olofsson, G.; Sanz-Forcada, J.; Thébault, P.; White, G. J.

    2015-01-01

    Context. The precise mechanisms that provide the non-radiative energy for heating the chromosphere and the corona of the Sun and those of other stars constitute an active field of research. By studying stellar chromospheres one aims at identifying the relevant physical processes. Defining the permittable extent of the parameter space can also serve as a template for the Sun-as-a-star. This feedback will probably also help identify stars that potentially host planetary systems that are reminiscent of our own. Aims: Earlier observations with Herschel and APEX have revealed the temperature minimum of α Cen, but these were unable to spatially resolve the binary into individual components. With the data reported in this Letter, we aim at remedying this shortcoming. Furthermore, these earlier data were limited to the wavelength region between 100 and 870 μm. In the present context, we intend to extend the spectral mapping (SED) to longer wavelengths, where the contrast between stellar photospheric and chromospheric emission becomes increasingly evident. Methods: The Atacama Large Millimeter/submillimeter Array (ALMA) is particularly suited to point sources, such as unresolved stars. ALMA provides the means to achieve our objectives with both its high sensitivity of the collecting area for the detection of weak signals and the high spatial resolving power of its adaptable interferometer for imaging close multiple stars. Results: This is the first detection of main-sequence stars at a wavelength of 3 mm. Furthermore, the individual components of the binary α Cen AB are clearly detected and spatially well resolved at all ALMA wavelengths. The high signal-to-noise ratios of these data permit accurate determination of their relative flux ratios, i.e., SyB / SyA> = 0.54 ± 0.04 at 440 μm, = 0.46 ± 0.01 at 870 μm, and = 0.47 ± 0.006 at 3.1 mm, respectively. Conclusions: The previously obtained flux ratio of 0.44±0.18, which was based on measurements in the optical and

  5. A Critical Assessment of Ages Derived Using Pre-Main-Sequence Isochrones in Colour-Magnitude Diagrams

    NASA Astrophysics Data System (ADS)

    Bell, Cameron P. M.

    2012-11-01

    In this thesis a critical assessment of the ages derived using theoretical pre-main-sequence (pre-MS) stellar evolutionary models is presented by comparing the predictions to the low-mass pre-MS population of 14 young star-forming regions (SFRs) in colour-magnitude diagrams (CMDs). Deriving pre-MS ages requires precise distances and estimates of the reddening. Therefore, the main-sequence (MS) members of the SFRs have been used to derive a self-consistent set of statistically robust ages, distances and reddenings with associated uncertainties using a maximum-likelihood fitting statistic and MS evolutionary models. A photometric method for de-reddening individual stars - known as the Q-method - in regions where the extinction is spatially variable has been updated and is presented. The effects of both the model dependency and the SFR composition on these derived parameters are also discussed. The problem of calibrating photometric observations of red pre-MS stars is examined and it is shown that using observations of MS stars to transform the data into a standard photometric system can introduce significant errors in the position of the pre-MS locus in CMD space. Hence, it is crucial that precise photometric studies - especially of pre-MS objects - be carried out in the natural photometric system of the observations. This therefore requires a robust model of the system responses for the instrument used, and thus the calculated responses for the Wide-Field Camera on the Isaac Newton Telescope are presented. These system responses have been tested using standard star observations and have been shown to be a good representation of the photometric system. A benchmark test for the pre-MS evolutionary models is performed by comparing them to a set of well-calibrated CMDs of the Pleiades in the wavelength regime 0.4-2.5 μm. The masses predicted by these models are also tested against dynamical masses using a sample of MS binaries by calculating the system magnitude in a

  6. De novo protein sequencing by combining top-down and bottom-up tandem mass spectra.

    PubMed

    Liu, Xiaowen; Dekker, Lennard J M; Wu, Si; Vanduijn, Martijn M; Luider, Theo M; Tolić, Nikola; Kou, Qiang; Dvorkin, Mikhail; Alexandrova, Sonya; Vyatkina, Kira; Paša-Tolić, Ljiljana; Pevzner, Pavel A

    2014-07-03

    There are two approaches for de novo protein sequencing: Edman degradation and mass spectrometry (MS). Existing MS-based methods characterize a novel protein by assembling tandem mass spectra of overlapping peptides generated from multiple proteolytic digestions of the protein. Because each tandem mass spectrum covers only a short peptide of the target protein, the key to high coverage protein sequencing is to find spectral pairs from overlapping peptides in order to assemble tandem mass spectra to long ones. However, overlapping regions of peptides may be too short to be confidently identified. High-resolution mass spectrometers have become accessible to many laboratories. These mass spectrometers are capable of analyzing molecules of large mass values, boosting the development of top-down MS. Top-down tandem mass spectra cover whole proteins. However, top-down tandem mass spectra, even combined, rarely provide full ion fragmentation coverage of a protein. We propose an algorithm, TBNovo, for de novo protein sequencing by combining top-down and bottom-up MS. In TBNovo, a top-down tandem mass spectrum is utilized as a scaffold, and bottom-up tandem mass spectra are aligned to the scaffold to increase sequence coverage. Experiments on data sets of two proteins showed that TBNovo achieved high sequence coverage and high sequence accuracy.

  7. Protein sequences from mastodon and Tyrannosaurus rex revealed by mass spectrometry.

    PubMed

    Asara, John M; Schweitzer, Mary H; Freimark, Lisa M; Phillips, Matthew; Cantley, Lewis C

    2007-04-13

    Fossilized bones from extinct taxa harbor the potential for obtaining protein or DNA sequences that could reveal evolutionary links to extant species. We used mass spectrometry to obtain protein sequences from bones of a 160,000- to 600,000-year-old extinct mastodon (Mammut americanum) and a 68-million-year-old dinosaur (Tyrannosaurus rex). The presence of T. rex sequences indicates that their peptide bonds were remarkably stable. Mass spectrometry can thus be used to determine unique sequences from ancient organisms from peptide fragmentation patterns, a valuable tool to study the evolution and adaptation of ancient taxa from which genomic sequences are unlikely to be obtained.

  8. A Wide-field Survey for Transiting Hot Jupiters and Eclipsing Pre-main-sequence Binaries in Young Stellar Associations

    NASA Astrophysics Data System (ADS)

    Oelkers, Ryan J.; Macri, Lucas M.; Marshall, Jennifer L.; DePoy, Darren L.; Lambas, Diego G.; Colazo, Carlos; Stringer, Katelyn

    2016-09-01

    The past two decades have seen a significant advancement in the detection, classification, and understanding of exoplanets and binaries. This is due, in large part, to the increase in use of small-aperture telescopes (<20 cm) to survey large areas of the sky to milli-mag precision with rapid cadence. The vast majority of the planetary and binary systems studied to date consists of main-sequence or evolved objects, leading to a dearth of knowledge of properties at early times (<50 Myr). Only a dozen binaries and one candidate transiting Hot Jupiter are known among pre-main-sequence objects, yet these are the systems that can provide the best constraints on stellar formation and planetary migration models. The deficiency in the number of well characterized systems is driven by the inherent and aperiodic variability found in pre-main-sequence objects, which can mask and mimic eclipse signals. Hence, a dramatic increase in the number of young systems with high-quality observations is highly desirable to guide further theoretical developments. We have recently completed a photometric survey of three nearby (<150 pc) and young (<50 Myr) moving groups with a small-aperture telescope. While our survey reached the requisite photometric precision, the temporal coverage was insufficient to detect Hot Jupiters. Nevertheless, we discovered 346 pre-main-sequence binary candidates, including 74 high-priority objects for further study. This paper includes data taken at The McDonald Observatory of The University of Texas at Austin.

  9. Persistent Sub-Yearly Chromospheric Variations in Lower Main-Sequence Stars: Tau Booe and alpha Com

    NASA Technical Reports Server (NTRS)

    Maulik, Davesh; Donahue, Robert A.; Baliunas, Sallie L.

    1997-01-01

    The recent discoveries of extrasolar planetary systems around lower main-sequence stars such as tau Booe (HD 120136) has prompted further investigation into their stellar activity. A cursory analysis of tau Booe for cyclic chromospheric activity, based on its 30-yr record of Ca 2 H and K fluxes obtained as part of the HK Project from Mount Wilson Observatory, finds an intermediate, sub-yearly period (approximately 117 d) in chromospheric activity in addition to, and separate from, both its rotation (3.3 d) and long-term variability. As a persistent subyearly period in surface magnetic activity is unprecedented, we investigate this apparent anomaly further by examining chromospheric activity levels of other stars with similar mass, searching for variability in chromospheric activity with periods of less than one year, but longer than measured or predicted rotation. An examination of the time series of 40 mid-to-late F dwarfs yielded one other star for further analysis: alpha Com (HD 114378, P approximately 132 d). The variations for these two stars were checked for persistence and coherence. Based on these determinations, we eliminate the possibilities of rotation, long-term activity cycle, and the evolution of active regions as the cause of this variation in both stars. In particular, for tau Booe we infer that the phenomenon may be chromospheric in origin; however, beyond this, it is difficult to identify anything further regarding the cause of the activity variations, or even whether the observed modulation in the two stars have the same origin.

  10. The dot{M}-M_* relation of pre-main-sequence stars: a consequence of X-ray driven disc evolution

    NASA Astrophysics Data System (ADS)

    Ercolano, B.; Mayr, D.; Owen, J. E.; Rosotti, G.; Manara, C. F.

    2014-03-01

    We analyse current measurements of accretion rates on to pre-main-sequence stars as a function of stellar mass, and conclude that the steep dependence of accretion rates on stellar mass is real and not driven by selection/detection threshold, as has been previously feared. These conclusions are reached by means of statistical tests including a survival analysis which can account for upper limits. The power-law slope of the dot{M}-M_* relation is found to be in the range of 1.6-1.9 for young stars with masses lower than 1 M⊙. The measured slopes and distributions can be easily reproduced by means of a simple disc model which includes viscous accretion and X-ray photoevaporation. We conclude that the dot{M}-M_* relation in pre-main-sequence stars bears the signature of disc dispersal by X-ray photoevaporation, suggesting that the relation is a straightforward consequence of disc physics rather than an imprint of initial conditions.

  11. Prospects for detecting decreasing exoplanet frequency with main-sequence age using PLATO

    NASA Astrophysics Data System (ADS)

    Veras, Dimitri; Brown, David J. A.; Mustill, Alexander J.; Pollacco, Don

    2015-10-01

    The space mission PLATO will usher in a new era of exoplanetary science by expanding our current inventory of transiting systems and constraining host star ages, which are currently highly uncertain. This capability might allow PLATO to detect changes in planetary system architecture with time, particularly because planetary scattering due to Lagrange instability may be triggered long after the system was formed. Here, we utilize previously published instability time-scale prescriptions to determine PLATO's capability to detect a trend of decreasing planet frequency with age for systems with equal-mass planets. For two-planet systems, our results demonstrate that PLATO may detect a trend for planet masses which are at least as massive as super-Earths. For systems with three or more planets, we link their initial compactness to potentially detectable frequency trends in order to aid future investigations when these populations will be better characterized.

  12. Prospects for detecting decreasing exoplanet frequency with main-sequence age using PLATO

    NASA Astrophysics Data System (ADS)

    Veras, D.; Brown, D. J. A.; Mustill, A. J.; Pollacco, D.

    2017-09-01

    The space mission PLATO will usher in a new era of exoplanetary science by expanding our current inventory of transiting systems and constraining host star ages, which are currently highly uncertain. This capability might allow PLATO to detect changes in planetary system architecture with time, particularly because planetary scattering due to Lagrange instability may be triggered long after the system was formed. Here, we utilize previously published instability time-scale prescriptions to determine PLATO's capability to detect a trend of decreasing planet frequency with age for systems with equal- mass planets. For two-planet systems, our results demonstrate that PLATO may detect a trend for planet masses which are at least as massive as super-Earths. For systems with three or more planets, we link their initial compactness to potentially detectable frequency trends in order to aid future investigations when these populations will be better characterized.

  13. A frozen super-Earth orbiting a star at the bottom of the main sequence

    NASA Astrophysics Data System (ADS)

    Kubas, D.; Beaulieu, J. P.; Bennett, D. P.; Cassan, A.; Cole, A.; Lunine, J.; Marquette, J. B.; Dong, S.; Gould, A.; Sumi, T.; Batista, V.; Fouqué, P.; Brillant, S.; Dieters, S.; Coutures, C.; Greenhill, J.; Bond, I.; Nagayama, T.; Udalski, A.; Pompei, E.; Nürnberger, D. E. A.; Le Bouquin, J. B.

    2012-04-01

    Context. Microlensing is a unique method to probe low mass exoplanets beyond the snow line. However, the scientific potential of the new microlensing planet discovery is often unfulfilled due to lack of knowledge of the properties of the lens and source stars. The discovery light curve of the super Earth MOA-2007-BLG-192Lb suffers from significant degeneracies that limit what can be inferred about its physical properties. Aims: High resolution adaptive optics images allow us to solve this problem by resolving the microlensing target from all unrelated background stars, yielding the unique determination of magnified source and lens fluxes. This estimation permits the solution of our microlens model for the mass of the planet and its host and their physical projected separation. Methods: We observed the microlensing event MOA-2007-BLG-192 at high angular resolution in JHKs with the NACO adaptive optics system on the VLT while the object was still amplified by a factor 1.23 and then at baseline 18 months later. We analyzed and calibrated the NACO photometry in the standard 2MASS system in order to accurately constrain the source and the lens star fluxes. Results: We detect light from the host star of MOA-2007-BLG-192Lb, which significantly reduces the uncertainties in its characteristics as compared to earlier analyses. We find that MOA-2007-BLG-192L is most likely a very low mass late type M-dwarf (0.084-0.012+0.015 M⊙) at a distance of 660-70+100 pc orbited by a 3.2-1.8+5.2 M⊕ super-Earth at 0.66-0.22+0.51 AU. We then discuss the properties of this cold planetary system. Based on observations under ESO Prog.IDs: 279.C-5044(A) and 383-C.0495(A).

  14. Stars of type MS with evidence of white dwarf companions. [IUE, Main Sequence (MS)

    NASA Technical Reports Server (NTRS)

    Peery, Benjamin F., Jr.

    1986-01-01

    A search for white dwarf companions of MS-type stars was conducted, using IUE. The overendowments of these stars in typical S-process nuclides suggest that they, like the Ba II stars, may owe their peculiar compositions to earlier mass transfer. Short-wavelength IUE spectra show striking emission line variability in HD35155, HD61913, and 4 Ori; HD35155 and 4 Ori show evidence of white dwarf companions.

  15. A tale of two anomalies: Depletion, dispersion, and the connection between the stellar lithium spread and inflated radii on the pre-main sequence

    SciTech Connect

    Somers, Garrett; Pinsonneault, Marc H., E-mail: somers@astronomy.ohio-state.edu, E-mail: pinsono@astronomy.ohio-state.edu

    2014-07-20

    We investigate lithium depletion in standard stellar models (SSMs) and main sequence (MS) open clusters, and explore the origin of the Li dispersion in young, cool stars of equal mass, age, and composition. We first demonstrate that SSMs accurately predict the Li abundances of solar analogs at the zero-age main sequence (ZAMS) within theoretical uncertainties. We then measure the rate of MS Li depletion by removing the [Fe/H]-dependent ZAMS Li pattern from three well-studied clusters, and comparing the detrended data. MS depletion is found to be mass-dependent, in the sense of more depletion at low mass. A dispersion in Limore » abundance at fixed T{sub eff} is nearly universal, and sets in by ∼200 Myr. We discuss mass and age dispersion trends, and the pattern is mixed. We argue that metallicity impacts the ZAMS Li pattern, in agreement with theoretical expectations but contrary to the findings of some previous studies, and suggest Li as a test of cluster metallicity. Finally, we argue that a radius dispersion in stars of fixed mass and age, during the epoch of pre-MS Li destruction, is responsible for the spread in Li abundances and the correlation between rotation and Li in young cool stars, most well known in the Pleiades. We calculate stellar models, inflated to match observed radius anomalies in magnetically active systems, and the resulting range of Li abundances reproduces the observed patterns of young clusters. We discuss ramifications for pre-MS evolutionary tracks and age measurements of young clusters, and suggest an observational test.« less

  16. Understanding the scatter in the spatially resolved star formation main sequence of local massive spiral galaxies

    NASA Astrophysics Data System (ADS)

    Abdurro'uf; Akiyama, Masayuki

    2017-08-01

    We investigate the relation between star formation rate (SFR) and stellar mass (M*) at the sub-galactic scale (˜1 kpc) of 93 local (0.01 < z < 0.02) massive (M* > 1010.5 M⊙) spiral galaxies. To derive a spatially resolved SFR and stellar mass, we perform the so-called pixel-to-pixel spectral energy distribution (SED) fitting, which fits an observed spatially resolved multiband SED with a library of model SEDs using Bayesian statistics. We use two bands (far-ultraviolet or FUV and near-ultraviolet or NUV) and five bands (u, g, r, I and z) of imaging data from Galaxy Evolution Explorer (GALEX) and Sloan Digital Sky Survey (SDSS), respectively. We find a tight nearly linear relation between the local surface density of SFR (ΣSFR) and stellar mass (Σ*), which is flattened at high Σ*. The near linear relation between Σ* and ΣSFR suggests a constant specific SFR (sSFR) throughout the galaxies, and the scatter of the relation is directly related to that of the sSFR. Therefore, we analyse the variation of the sSFR in various scales. More massive galaxies on average have lower sSFR throughout them than less massive galaxies. We also find that barred galaxies have a lower sSFR in the core region than non-barred galaxies. However, in the outer region, the sSFRs of barred and non-barred galaxies are similar and lead to a similar total sSFR.

  17. Tidal Disruptions of Main Sequence Stars: Inferences from the Composition of the Fallback Material

    NASA Astrophysics Data System (ADS)

    Gallegos, Monica; Law-Smith, Jamie; Ramírez-Ruiz, Enrico

    2018-01-01

    We study black holes within galactic nuclei by analyzing the motions of stars swarming around them. When the conditions are right we can observe and analyze characteristics of the black hole’s destructive power. In this paper we analyze the case when a star lurks close enough to these gravity giants to be ripped apart. After disruption, material that is bound to the supermassive black hole accretes onto it and creates a powerful flare. The standard light curve of these flares is classically described by a t-5/3 power law in time. In this paper we adopt an analytical method to calculate the fallback rate and use Modules for Experiments in Stellar Astrophysics (MESA) to study the disruption of stars with masses between 0.8-3 M⊙ at various evolutionary stages. We move beyond the analysis of the light curve and peer into the interiors of the disrupted stars by studying the compositional features of the fallback material. With this work we can begin to constrain the nature of the stars that are tidally disrupted. We find that most stars develop nitrogen (14N) enhancements with carbon (12C) and oxygen (16O) depletion relative to solar abundance and find that these features are more pronounced for higher mass stars. We also find that these features become prominent only after the time of maximum fallback rate, tpeak, and are observed to appear at earlier times for stars of increasing mass. This work provides a clear spectral method to help classify the transient events we observe at the centers of galaxies.

  18. The main challenges that remain in applying high-throughput sequencing to clinical diagnostics.

    PubMed

    Loeffelholz, Michael; Fofanov, Yuriy

    2015-01-01

    Over the last 10 years, the quality, price and availability of high-throughput sequencing instruments have improved to the point that this technology may be close to becoming a routine tool in the diagnostic microbiology laboratory. Two groups of challenges, however, have to be resolved in order to move this powerful research technology into routine use in the clinical microbiology laboratory. The computational/bioinformatics challenges include data storage cost and privacy concerns, requiring analysis to be performed without access to cloud storage or expensive computational infrastructure. The logistical challenges include interpretation of complex results and acceptance and understanding of the advantages and limitations of this technology by the medical community. This article focuses on the approaches to address these challenges, such as file formats, algorithms, data collection, reporting and good laboratory practices.

  19. Determination of the sequences of protein-derived peptides and peptide mixtures by mass spectrometry

    PubMed Central

    Morris, Howard R.; Williams, Dudley H.; Ambler, Richard P.

    1971-01-01

    Micro-quantities of protein-derived peptides have been converted into N-acetylated permethyl derivatives, and their sequences determined by low-resolution mass spectrometry without prior knowledge of their amino acid compositions or lengths. A new strategy is suggested for the mass spectrometric sequencing of oligopeptides or proteins, involving gel filtration of protein hydrolysates and subsequent sequence analysis of peptide mixtures. Finally, results are given that demonstrate for the first time the use of mass spectrometry for the analysis of a protein-derived peptide mixture, again without prior knowledge of the protein or components within the mixture. PMID:5158904

  20. High-resolution Imaging of PHIBSS z ˜ 2 Main-sequence Galaxies in CO J = 1 → 0

    NASA Astrophysics Data System (ADS)

    Bolatto, A. D.; Warren, S. R.; Leroy, A. K.; Tacconi, L. J.; Bouché, N.; Förster Schreiber, N. M.; Genzel, R.; Cooper, M. C.; Fisher, D. B.; Combes, F.; García-Burillo, S.; Burkert, A.; Bournaud, F.; Weiss, A.; Saintonge, A.; Wuyts, S.; Sternberg, A.

    2015-08-01

    We present Karl Jansky Very Large Array observations of the CO J=1-0 transition in a sample of four z˜ 2 main-sequence galaxies. These galaxies are in the blue sequence of star-forming galaxies at their redshift, and are part of the IRAM Plateau de Bure HIgh-z Blue Sequence Survey which imaged them in CO J=3-2. Two galaxies are imaged here at high signal-to-noise, allowing determinations of their disk sizes, line profiles, molecular surface densities, and excitation. Using these and published measurements, we show that the CO and optical disks have similar sizes in main-sequence galaxies, and in the galaxy where we can compare CO J=1-0 and J=3-2 sizes we find these are also very similar. Assuming a Galactic CO-to-H2 conversion, we measure surface densities of {{{Σ }}}{mol}˜ 1200 {M}⊙ pc-2 in projection and estimate {{{Σ }}}{mol}˜ 500-900 {M}⊙ pc-2 deprojected. Finally, our data yields velocity-integrated Rayleigh-Jeans brightness temperature line ratios r31 that are approximately at unity. In addition to the similar disk sizes, the very similar line profiles in J=1-0 and J=3-2 indicate that both transitions sample the same kinematics, implying that their emission is coextensive. We conclude that in these two main-sequence galaxies there is no evidence for significant excitation gradients or a large molecular reservoir that is diffuse or cold and not involved in active star formation. We suggest that r31 in very actively star-forming galaxies is likely an indicator of how well-mixed the star formation activity and the molecular reservoir are.

  1. VizieR Online Data Catalog: Lower main-sequence stars fundamental param. (Casagrande+, 2006)

    NASA Astrophysics Data System (ADS)

    Casagrande, L.; Portinari, L.; Flynn, C.

    2007-06-01

    To recover accurate bolometric fluxes and temperatures for the stars, we have obtained accurate and homogeneous Johnson-Cousins BV(RI)C and JHKs photometry for all the 186 stars in our initial sample. For most of the stars in our sample with declination north of DE=-25°, we have made our own photometric observations from April to December 2004. Observations were done from Finland in full remote mode, using the 35-cm telescope piggybacked on the Swedish 60-cm telescope located at La Palma in the Canary Islands. A SBIG charge-coupled device was used through all the observations. Johnson-Cousins BV(RI)C colours were obtained for all stars. Infrared JHKs photometry for the sample has been taken from the Two-Micron All-Sky Survey (2MASS) catalogue. (1 data file).

  2. VizieR Online Data Catalog: Lower main-sequence stars fundamental param. (Casagrande+, 2006)

    NASA Astrophysics Data System (ADS)

    Casagrande, L.; Portinari, L.; Flynn, C.

    2007-06-01

    To recover accurate bolometric fluxes and temperatures for the stars, we have obtained accurate and homogeneous Johnson-Cousins BV(RI)C and JHKs photometry for all the 186 stars in our initial sample. For most of the stars in our sample with declination north of DE=-25{deg}, we have made our own photometric observations from April to December 2004. Observations were done from Finland in full remote mode, using the 35-cm telescope piggybacked on the Swedish 60-cm telescope located at La Palma in the Canary Islands. A SBIG charge-coupled device was used through all the observations. Johnson-Cousins BV(RI)C colours were obtained for all stars. Infrared JHKs photometry for the sample has been taken from the Two-Micron All-Sky Survey (2MASS) catalogue. (1 data file).

  3. Some aspects of cool main sequence star ages derived from stellar rotation (gyrochronology)

    NASA Astrophysics Data System (ADS)

    Barnes, S. A.; Spada, F.; Weingrill, J.

    2016-09-01

    Rotation periods for cool stars can be measured with good precision by monitoring starspot light modulation. Observations have shown that the rotation periods of dwarf stars of roughly solar metallicity have such systematic dependencies on stellar age and mass that they can be used to derive reliable ages, a procedure called gyrochronology. We review the method and show illustrative cases, including recent ground- and space-based data. The age uncertainties approach 10 % in the best cases, making them a valuable complement to, and constraint on, asteroseismic or other ages. Edited, updated, and refereed version of a presentation at the WE-Heraeus-Seminar in Bad Honnef, Germany: Reconstructing the Milky Way's History: Spectroscopic Surveys, Asteroseismology and Chemodynamical Models

  4. Interactions between pre-main-sequence objects and molecular clouds. I. Elias 1-12

    SciTech Connect

    Levreault, R.M.

    1983-02-15

    Line profiles of the CO( J = 1 ..-->.. 0), CO( J = 2 ..-->.. 1), /sup 13/CO( J = 1 ..-->.. 0), /sup 13/CO( J = 2 ..-->.. 1), HCO/sup +/( J = 1 ..-->.. 0), and HCO/sup +/( J = 3 ..-->.. 2) transitions have been observed toward the FU Orionis star Elias 1-12. The CO profiles show broad asymmetric line wings, while the /sup 13/CO and HCO/sup +/ profiles show weaker wings. The ratios of various transitions in the line wings are a powerful probe of the physical conditions in the kinematically disturbed gas that produces themore » broad wings. The disturbed gas extends over 0.3 pc and has a total mass of 1.2 M/sub sun/. Its kinetic temperature, as derived from CO( J = 2 ..-->.. 1)/CO( J = 1 ..-->.. 0) and /sup 13/CO( J = 2 ..-->.. 1)//sup 13/CO( J = 1 ..-->.. 0) ratios, is low, only 7-15 K. This temperature, when combined with the HCO/sup 1/( J = 3 ..-->.. 2)/HCO/sup +/( J = 1 ..-->.. 0) ratio, gives a density estimate of 10/sup 6/-10/sup 7/ cm/sup -3/. The HCO/sup +/ abundance in the disturbed gas seems to be normal or somewhat enhanced, in contradiction to theoretical expectations.« less

  5. The threshold for stellar winds in hot main-sequence stars

    NASA Technical Reports Server (NTRS)

    Grigsby, James A.; Morrison, Nancy D.

    1995-01-01

    The profiles of ultraviolet resonance lines of C IV were surveyed in a sample of 29 cluster and association members in the spectral type range O9-B2 III-V, together with a few field stars of interest. The temperatures and gravities of the stars were taken from the model atmosphere analysis by Grigsby, Morrison, & Anderson (1992), and the luminosities were estimated on the basis of cluster and association distances from the recent literature. A parameter P(sub w) was defined in order to describe the degree and assymetry of the C IV profile. This parameter, together with total C IV equivalent width, was found to be well correlated with stellar luminosity and temperature. A few anomalous stars were noted: tau Sco, HD 66665, HD 13621, and the ON stars HD12323 and HD 201345. The results suggest a sudden onset of observable mass loss at T(effective) = 27,500 +/- 500 K, log (L/solar luminosity) = 4.4 +/- 0.12, in agreement with the previous study by Prinja (1989). At T(effective) = 28,000 K and log g = 4, our non-LTE model atmospheres show an enhancement in the ground-state population of C(+3) in their topmost layer, which could be responsible for initiation of the winds via radiation pressure on the C(+3) ions, or for the onset of visibility of C(+3) ions in the wind because of an increase in the optical depth in the C IV lines in the outermost layers.

  6. Pre-main sequence stars with disks in the Eagle Nebula observed in scattered light

    NASA Astrophysics Data System (ADS)

    Guarcello, M. G.; Damiani, F.; Micela, G.; Peres, G.; Prisinzano, L.; Sciortino, S.

    2010-10-01

    Context. NGC 6611 and its parental cloud, the Eagle Nebula (M 16), are well-studied star-forming regions, thanks to their large content of both OB stars and stars with disks and the observed ongoing star formation. In our previous studies of the Eagle Nebula, we identified 834 disk-bearing stars associated with the cloud, after detecting their excesses in NIR bands from J band to 8.0 μ m. Aims: In this paper, we study in detail the nature of a subsample of disk-bearing stars that show peculiar characteristics. They appear older than the other members in the V vs. V-I diagram, and/or they have one or more IRAC colors at pure photospheric values, despite showing NIR excesses, when optical and infrared colors are compared. Methods: We confirm the membership of these stars to M 16 by a spectroscopic analysis. The physical properties of these stars with disks are studied by comparing their spectral energy distributions (SEDs) with the SEDs predicted by models of T Tauri stars with disks and envelopes. Results: We show that the age of these stars estimated from the V vs. V-I diagram is unreliable since their V-I colors are altered by the light scattered by the disk into the line of sight. Only in a few cases their SEDs are compatible with models with excesses in V band caused by optical veiling. Candidate members with disks and photospheric IRAC colors are selected by the used NIR disk diagnostic, which is sensitive to moderate excesses, such as those produced by disks with low masses. In 1/3 of these cases, scattering of stellar flux by the disks can also be invoked. Conclusions: The photospheric light scattered by the disk grains into the line of sight can affect the derivation of physical parameters of Class II stars from photometric optical and NIR data. Besides, the disks diagnostic we defined are useful for selecting stars with disks, even those with moderate excesses or whose optical colors are altered by veiling or photospheric scattered light. Table with the

  7. Extreme value statistics for two-dimensional convective penetration in a pre-main sequence star

    NASA Astrophysics Data System (ADS)

    Pratt, J.; Baraffe, I.; Goffrey, T.; Constantino, T.; Viallet, M.; Popov, M. V.; Walder, R.; Folini, D.

    2017-08-01

    Context. In the interior of stars, a convectively unstable zone typically borders a zone that is stable to convection. Convective motions can penetrate the boundary between these zones, creating a layer characterized by intermittent convective mixing, and gradual erosion of the density and temperature stratification. Aims: We examine a penetration layer formed between a central radiative zone and a large convection zone in the deep interior of a young low-mass star. Using the Multidimensional Stellar Implicit Code (MUSIC) to simulate two-dimensional compressible stellar convection in a spherical geometry over long times, we produce statistics that characterize the extent and impact of convective penetration in this layer. Methods: We apply extreme value theory to the maximal extent of convective penetration at any time. We compare statistical results from simulations which treat non-local convection, throughout a large portion of the stellar radius, with simulations designed to treat local convection in a small region surrounding the penetration layer. For each of these situations, we compare simulations of different resolution, which have different velocity magnitudes. We also compare statistical results between simulations that radiate energy at a constant rate to those that allow energy to radiate from the stellar surface according to the local surface temperature. Results: Based on the frequency and depth of penetrating convective structures, we observe two distinct layers that form between the convection zone and the stable radiative zone. We show that the probability density function of the maximal depth of convective penetration at any time corresponds closely in space with the radial position where internal waves are excited. We find that the maximal penetration depth can be modeled by a Weibull distribution with a small shape parameter. Using these results, and building on established scalings for diffusion enhanced by large-scale convective motions, we

  8. [The Main Gate Syndrome: a new format in mass-casualty victim "surge" management?].

    PubMed

    Sockeel, P; De Saint Roman, C; Massoure, M-P; Nadaud, J; Cinquetti, G; Chatelain, E

    2008-01-01

    Recent suicide bombings pose the novel problem for Trauma Centers of the massive simultaneous arrival of many gravely wounded patients. We report the experience of the French-German Military Trauma Group, a Level 2 Trauma Center, in Afghanistan during the wave of suicide bombings in February 2007. Fourteen casualties were received. A first triage was carried out by the U S Army Level I group prior to evacuation. A second surgical triage was carried out with systematic ultrasound exam. Four cases (ISS>25) were re-categorized and underwent emergency surgical procedures. Suicide bombing in crowded locations near an evacuation hospital may overwhelm the medical resources of the receiving center. It has been referred to as "The Main Gate Syndrome." We introduced the novel concept of a semi-evacuation hospital or receiving center where a second surgical triage was carried out. These exceptional circumstances require open-minded flexibility, a tailored approach, and close cooperation between surgeons and anesthetists to share experience, opinions, and ideas. In the setting of mass casualties, emergency ultrasound exam was shown to be a valuable and effective tool by virtue of its mobility, reproducibility, and immediate results.

  9. Medical Sequencing at the extremes of Human Body Mass

    SciTech Connect

    Ahituv, Nadav; Kavaslar, Nihan; Schackwitz, Wendy

    2006-09-01

    Body weight is a quantitative trait with significantheritability in humans. To identify potential genetic contributors tothis phenotype, we resequenced the coding exons and splice junctions of58 genes in 379 obese and 378 lean individuals. Our 96Mb survey included21 genes associated with monogenic forms of obesity in humans or mice, aswell as 37 genes that function in body weight-related pathways. We foundthat the monogenic obesity-associated gene group was enriched for rarenonsynonymous variants unique to the obese (n=46) versus lean (n=26)populations. Computational analysis further predicted a significantlygreater fraction of deleterious variants within the obese cohort.Consistent with the complex inheritance of body weight,more » we did notobserve obvious familial segregation in the majority of the 28 availablekindreds. Taken together, these data suggest that multiple rare alleleswith variable penetrance contribute to obesity in the population andprovide a deep medical sequencing based approach to detectthem.« less

  10. The luminosity function at the end of the main sequence: Results of a deep, large-area, CCD survey for cool dwarfs

    NASA Technical Reports Server (NTRS)

    Kirkpatrick, J. Davy; Mcgraw, John T.; Hess, Thomas R.; Liebert, James; Mccarthy, Donald W., Jr.

    1994-01-01

    late-type M dwarfs are substellar. The luminosity function data together with an empirical derivation of the mass-luminosity relation (from Henry & McCarthy) are used to compute a mass function independent of theory. This mass function increases toward the end of the main sequence, but the observed density of M dwarfs is still insufficient to account for the missing mass. If the increases seen in the luminosity and mass functions are indicative of a large, unseen, substellar population, brown dwarfs may yet add significantly to the mass of the Galaxy.

  11. Extended Star-formation and Disk-like Kinematics in a z~3 Massive ``Main-Sequence'' Galaxy through [CII] Imaging and Multi-J CO Line Observations

    NASA Astrophysics Data System (ADS)

    Leung, Tsz Kuk Daisy; Riechers, Dominik A.; Clements, David; Cooray, Asantha; Ivison, Rob; Perez-Fournon, Ismael; Wardlow, Julie

    2018-01-01

    Dusty star-forming galaxies (SFG) at high redshifts are the main contributors to the comoving star formation rate (SFR) density, which peaks between the redshift of z=1-3 (``Cosmic Noon''). Yet, new insights into their gas dynamics, and thus, structural evolution are awaiting spatially resolved observations. I will present the latest results from our kpc-scale [CII] imaging and multi-J CO line observations obtained with ALMA, CARMA, PdBI, and the VLA in one of the most massive ``main-sequence'' disk galaxy known. XMM03 (z=2.9850) is an extremely IR-luminous galaxy with a SFR of ~3000 Msun/yr, but its molecular gas excitation is surprisingly similar to the Milky Way up to J=5, which is in stark contrast with most high-z galaxies studied to date. The monotonic velocity gradient seen in the [CII] line emission suggest that it is a rotating disk galaxy. Based on the molecular gas surface density and the far-UV radiation flux determined from photo-dissociation region (PDR) modeling, the star-forming environment of XMM03 is similar to nearby SFGs. These findings together with the ~1100 km/s wide CO(1-0) line across the entire disk of ~8 kpc in radius showcase the different interstellar medium (ISM) environment that we are probing at the most massive end of galaxies in the early Universe. With a stellar mass of M*~10^12, its specific SFR is consistent with an extrapolation of the ``star-forming main-sequence'' up to M*~10^12 Msun at z~3. Our findings therefore confirm the prevalence of disk-wide star formation responsible for assembling most of the stellar masses toward the ``Cosmic Noon''.

  12. Copious amounts of hot and cold dust orbiting the main sequence a-type stars HD 131488 and HD 121191

    SciTech Connect

    Melis, Carl; Zuckerman, B.; Rhee, Joseph H.

    2013-11-20

    We report two new dramatically dusty main sequence stars: HD 131488 (A1 V) and HD 121191 (A8 V). HD 131488 is found to have substantial amounts of dust in its terrestrial planet zone (L {sub IR}/L {sub bol} ≈ 4 × 10{sup –3}), cooler dust farther out in its planetary system, and an unusual mid-infrared spectral feature. HD 121191 shows terrestrial planet zone dust (L {sub IR}/L {sub bol} ≈ 2.3 × 10{sup –3}), hints of cooler dust, and shares the unusual mid-infrared spectral shape identified in HD 131488. These two stars belong to sub-groups of the Scorpius-Centaurus OB associationmore » and have ages of ∼10 Myr. HD 131488 and HD 121191 are the dustiest main sequence A-type stars currently known. Early-type stars that host substantial inner planetary system dust are thus far found only within the age range of 5-20 Myr.« less

  13. The rate and efficiency of high-mass star formation along the Hubble sequence

    NASA Technical Reports Server (NTRS)

    Devereux, Nicholas A.; Young, Judith S.

    1991-01-01

    Data obtained with IRAS are used to compare and contrast the global star formation rates for a galactic sample which represents essentially all known noninteracting spiral and lenticular galaxies within 40 Mpc. The distribution of 60 micron luminosity is similar for spirals of types Sa-Scd inclusively, although the luminosities of the very early and very late types are, on average, one order of magnitude lower. High-mass star formation rates are similar for early, intermediate, and late type spirals, and the average high-mass star formation rate per unit molecular gas mass is independent of type for spiral galaxies. A remarkable homogeneity exists in the high-mass star-forming capabilities of spiral galaxies, particularly among the Sa-Scd types. The Hubble sequence is therefore not a sequence in the present-day rate or production efficiency of high-mass stars.

  14. How Dusty Is Alpha Centauri? Excess or Non-excess over the Infrared Photospheres of Main-sequence Stars

    NASA Technical Reports Server (NTRS)

    Wiegert, J.; Liseau, R.; Thebault, P.; Olofsson, G.; Mora, A.; Bryden, G.; Marshall, J. P.; Eiroa, C.; Montesinos, B.; Ardila, D.; hide

    2014-01-01

    Context. Debris discs around main-sequence stars indicate the presence of larger rocky bodies. The components of the nearby, solar-type binary Centauri have metallicities that are higher than solar, which is thought to promote giant planet formation. Aims. We aim to determine the level of emission from debris around the stars in the Cen system. This requires knowledge of their photospheres.Having already detected the temperature minimum, Tmin, of CenA at far-infrared wavelengths, we here attempt to do the same for the moreactive companion Cen B. Using the Cen stars as templates, we study the possible eects that Tmin may have on the detectability of unresolveddust discs around other stars. Methods.We used Herschel-PACS, Herschel-SPIRE, and APEX-LABOCA photometry to determine the stellar spectral energy distributions in thefar infrared and submillimetre. In addition, we used APEX-SHeFI observations for spectral line mapping to study the complex background around Cen seen in the photometric images. Models of stellar atmospheres and of particulate discs, based on particle simulations and in conjunctionwith radiative transfer calculations, were used to estimate the amount of debris around these stars. Results. For solar-type stars more distant than Cen, a fractional dust luminosity fd LdustLstar 2 107 could account for SEDs that do not exhibit the Tmin eect. This is comparable to estimates of fd for the Edgeworth-Kuiper belt of the solar system. In contrast to the far infrared,slight excesses at the 2:5 level are observed at 24 m for both CenA and B, which, if interpreted as due to zodiacal-type dust emission, wouldcorrespond to fd (13) 105, i.e. some 102 times that of the local zodiacal cloud. Assuming simple power-law size distributions of the dustgrains, dynamical disc modelling leads to rough mass estimates of the putative Zodi belts around the Cen stars, viz.4106 M$ of 4 to 1000 msize grains, distributed according to n(a) a3:5. Similarly, for filled-in Tmin

  15. How dusty is α Centauri?. Excess or non-excess over the infrared photospheres of main-sequence stars

    NASA Astrophysics Data System (ADS)

    Wiegert, J.; Liseau, R.; Thébault, P.; Olofsson, G.; Mora, A.; Bryden, G.; Marshall, J. P.; Eiroa, C.; Montesinos, B.; Ardila, D.; Augereau, J. C.; Bayo Aran, A.; Danchi, W. C.; del Burgo, C.; Ertel, S.; Fridlund, M. C. W.; Hajigholi, M.; Krivov, A. V.; Pilbratt, G. L.; Roberge, A.; White, G. J.; Wolf, S.

    2014-03-01

    Context. Debris discs around main-sequence stars indicate the presence of larger rocky bodies. The components of the nearby, solar-type binary α Centauri have metallicities that are higher than solar, which is thought to promote giant planet formation. Aims: We aim to determine the level of emission from debris around the stars in the α Cen system. This requires knowledge of their photospheres. Having already detected the temperature minimum, Tmin, of α Cen A at far-infrared wavelengths, we here attempt to do the same for the more active companion α Cen B. Using the α Cen stars as templates, we study the possible effects that Tmin may have on the detectability of unresolved dust discs around other stars. Methods: We used Herschel-PACS, Herschel-SPIRE, and APEX-LABOCA photometry to determine the stellar spectral energy distributions in the far infrared and submillimetre. In addition, we used APEX-SHeFI observations for spectral line mapping to study the complex background around α Cen seen in the photometric images. Models of stellar atmospheres and of particulate discs, based on particle simulations and in conjunction with radiative transfer calculations, were used to estimate the amount of debris around these stars. Results: For solar-type stars more distant than α Cen, a fractional dust luminosity fd ≡ Ldust/Lstar 2 × 10-7 could account for SEDs that do not exhibit the Tmin effect. This is comparable to estimates of fd for the Edgeworth-Kuiper belt of the solar system. In contrast to the far infrared, slight excesses at the 2.5σ level are observed at 24 μm for both α Cen A and B, which, if interpreted as due to zodiacal-type dust emission, would correspond to fd (1-3) × 10-5, i.e. some 102 times that of the local zodiacal cloud. Assuming simple power-law size distributions of the dust grains, dynamical disc modelling leads to rough mass estimates of the putative Zodi belts around the α Cen stars, viz. ≲4 × 10-6 M≤ftmoon of 4 to 1000 μm size

  16. Texture analysis of common renal masses in multiple MR sequences for prediction of pathology

    NASA Astrophysics Data System (ADS)

    Hoang, Uyen N.; Malayeri, Ashkan A.; Lay, Nathan S.; Summers, Ronald M.; Yao, Jianhua

    2017-03-01

    This pilot study performs texture analysis on multiple magnetic resonance (MR) images of common renal masses for differentiation of renal cell carcinoma (RCC). Bounding boxes are drawn around each mass on one axial slice in T1 delayed sequence to use for feature extraction and classification. All sequences (T1 delayed, venous, arterial, pre-contrast phases, T2, and T2 fat saturated sequences) are co-registered and texture features are extracted from each sequence simultaneously. Random forest is used to construct models to classify lesions on 96 normal regions, 87 clear cell RCCs, 8 papillary RCCs, and 21 renal oncocytomas; ground truths are verified through pathology reports. The highest performance is seen in random forest model when data from all sequences are used in conjunction, achieving an overall classification accuracy of 83.7%. When using data from one single sequence, the overall accuracies achieved for T1 delayed, venous, arterial, and pre-contrast phase, T2, and T2 fat saturated were 79.1%, 70.5%, 56.2%, 61.0%, 60.0%, and 44.8%, respectively. This demonstrates promising results of utilizing intensity information from multiple MR sequences for accurate classification of renal masses.

  17. IRAS 18153-1651: an H II region with a possible wind bubble blown by a young main-sequence B star

    NASA Astrophysics Data System (ADS)

    Gvaramadze, V. V.; Mackey, J.; Kniazev, A. Y.; Langer, N.; Chené, A.-N.; Castro, N.; Haworth, T. J.; Grebel, E. K.

    2017-04-01

    We report the results of spectroscopic observations and numerical modelling of the H II region IRAS 18153-1651. Our study was motivated by the discovery of an optical arc and two main-sequence stars of spectral type B1 and B3 near the centre of IRAS 18153-1651. We interpret the arc as the edge of the wind bubble (blown by the B1 star), whose brightness is enhanced by the interaction with a photoevaporation flow from a nearby molecular cloud. This interpretation implies that we deal with a unique case of a young massive star (the most massive member of a recently formed low-mass star cluster) caught just tens of thousands of years after its stellar wind has begun to blow a bubble into the surrounding dense medium. Our 2D, radiation-hydrodynamics simulations of the wind bubble and the H II region around the B1 star provide a reasonable match to observations, both in terms of morphology and absolute brightness of the optical and mid-infrared emission, and verify the young age of IRAS 18153-1651. Taken together our results strongly suggest that we have revealed the first example of a wind bubble blown by a main-sequence B star.

  18. GOODS-HERSCHEL: STAR FORMATION, DUST ATTENUATION, AND THE FIR–RADIO CORRELATION ON THE MAIN SEQUENCE OF STAR-FORMING GALAXIES UP TO z ≃ 4

    SciTech Connect

    Pannella, M.; Elbaz, D.; Daddi, E.

    We use deep panchromatic data sets in the GOODS-N field, from GALEX to the deepest Herschel far-infrared (FIR) and VLA radio continuum imaging, to explore the evolution of star-formation activity and dust attenuation properties of star-forming galaxies to z ≃ 4, using mass-complete samples. Our main results can be summarized as follows: (i) the slope of the star-formation rate–M{sub *} correlation is consistent with being constant ≃0.8 up to z ≃ 1.5, while its normalization keeps increasing with redshift; (ii) for the first time we are able to explore the FIR–radio correlation for a mass-selected sample of star-forming galaxies: themore » correlation does not evolve up to z ≃ 4; (iii) we confirm that galaxy stellar mass is a robust proxy for UV dust attenuation in star-forming galaxies, with more massive galaxies being more dust attenuated. Strikingly, we find that this attenuation relation evolves very weakly with redshift, with the amount of dust attenuation increasing by less than 0.3 mag over the redshift range [0.5–4] for a fixed stellar mass; (iv) the correlation between dust attenuation and the UV spectral slope evolves with redshift, with the median UV slope becoming bluer with redshift. By z ≃ 3, typical UV slopes are inconsistent, given the measured dust attenuations, with the predictions of commonly used empirical laws. (v) Finally, building on existing results, we show that gas reddening is marginally larger (by a factor of around 1.3) than the stellar reddening at all redshifts probed. Our results support a scenario where the ISM conditions of typical star-forming galaxies evolve with redshift, such that at z ≥ 1.5 Main Sequence galaxies have ISM conditions moving closer to those of local starbursts.« less

  19. Black Hole Growth Is Mainly Linked to Host-galaxy Stellar Mass Rather Than Star Formation Rate

    NASA Astrophysics Data System (ADS)

    Yang, G.; Chen, C.-T. J.; Vito, F.; Brandt, W. N.; Alexander, D. M.; Luo, B.; Sun, M. Y.; Xue, Y. Q.; Bauer, F. E.; Koekemoer, A. M.; Lehmer, B. D.; Liu, T.; Schneider, D. P.; Shemmer, O.; Trump, J. R.; Vignali, C.; Wang, J.-X.

    2017-06-01

    We investigate the dependence of black hole accretion rate (BHAR) on host-galaxy star formation rate (SFR) and stellar mass (M *) in the CANDELS/GOODS-South field in the redshift range of 0.5≤slant z< 2.0. Our sample consists of ≈ {{18,000}} galaxies, allowing us to probe galaxies with 0.1{M}⊙ {{yr}}-1≲ {SFR}≲ 100 {M}⊙ {{yr}}-1 and/or {10}8{M}⊙ ≲ {M}* ≲ {10}11 {M}⊙ . We use sample-mean BHAR to approximate long-term average BHAR. Our sample-mean BHARs are derived from the Chandra Deep Field-South 7 Ms observations, while the SFRs and M * have been estimated by the CANDELS team through spectral energy distribution fitting. The average BHAR is correlated positively with both SFR and M *, and the BHAR-SFR and BHAR-M * relations can both be described acceptably by linear models with a slope of unity. However, BHAR appears to be correlated more strongly with M * than SFR. This result indicates that M * is the primary host-galaxy property related to supermassive black hole (SMBH) growth, and the apparent BHAR-SFR relation is largely a secondary effect due to the star-forming main sequence. Among our sources, massive galaxies ({M}* ≳ {10}10{M}⊙ ) have significantly higher BHAR/SFR ratios than less massive galaxies, indicating that the former have higher SMBH fueling efficiency and/or higher SMBH occupation fraction than the latter. Our results can naturally explain the observed proportionality between {M}{BH} and M * for local giant ellipticals and suggest that their {M}{BH}/{M}* is higher than that of local star-forming galaxies. Among local star-forming galaxies, massive systems might have higher {M}{BH}/{M}* compared to dwarfs.

  20. The VLT-FLAMES Tarantula Survey. XVII. Physical and wind properties of massive stars at the top of the main sequence

    NASA Astrophysics Data System (ADS)

    Bestenlehner, J. M.; Gräfener, G.; Vink, J. S.; Najarro, F.; de Koter, A.; Sana, H.; Evans, C. J.; Crowther, P. A.; Hénault-Brunet, V.; Herrero, A.; Langer, N.; Schneider, F. R. N.; Simón-Díaz, S.; Taylor, W. D.; Walborn, N. R.

    2014-10-01

    The evolution and fate of very massive stars (VMS) is tightly connected to their mass-loss properties. Their initial and final masses differ significantly as a result of mass loss. VMS have strong stellar winds and extremely high ionising fluxes, which are thought to be critical sources of both mechanical and radiative feedback in giant H ii regions. However, how VMS mass-loss properties change during stellar evolution is poorly understood. In the framework of the VLT-Flames Tarantula Survey (VFTS), we explore the mass-loss transition region from optically thin O star winds to denser WNh Wolf-Rayet star winds, thereby testing theoretical predictions. To this purpose we select 62 O, Of, Of/WN, and WNh stars, an unprecedented sample of stars with the highest masses and luminosities known. We perform a spectral analysis of optical VFTS as well as near-infrared VLT/SINFONI data using the non-LTE radiative transfer code CMFGEN to obtain both stellar and wind parameters. For the first time, we observationally resolve the transition between optically thin O star winds and optically thick hydrogen-rich WNh Wolf-Rayet winds. Our results suggest the existence of a "kink" between both mass-loss regimes, in agreement with recent Monte Carlo simulations. For the optically thick regime, we confirm the steep dependence on the classical Eddington factor Γe from previous theoretical and observational studies. The transition occurs on the main sequence near a luminosity of 106.1L⊙, or a mass of 80 ... 90 M⊙. Above this limit, we find that - even when accounting for moderate wind clumping (with fv = 0.1) - wind mass-loss rates are enhanced with respect to standard prescriptions currently adopted in stellar evolution calculations. We also show that this results in substantial helium surface enrichment. Finally, based on our spectroscopic analyses, we are able to provide the most accurate ionising fluxes for VMS known to date, confirming the pivotal role of VMS in ionising and

  1. Proteogenomics: Integrating Next-Generation Sequencing and Mass Spectrometry to Characterize Human Proteomic Variation

    NASA Astrophysics Data System (ADS)

    Sheynkman, Gloria M.; Shortreed, Michael R.; Cesnik, Anthony J.; Smith, Lloyd M.

    2016-06-01

    Mass spectrometry-based proteomics has emerged as the leading method for detection, quantification, and characterization of proteins. Nearly all proteomic workflows rely on proteomic databases to identify peptides and proteins, but these databases typically contain a generic set of proteins that lack variations unique to a given sample, precluding their detection. Fortunately, proteogenomics enables the detection of such proteomic variations and can be defined, broadly, as the use of nucleotide sequences to generate candidate protein sequences for mass spectrometry database searching. Proteogenomics is experiencing heightened significance due to two developments: (a) advances in DNA sequencing technologies that have made complete sequencing of human genomes and transcriptomes routine, and (b) the unveiling of the tremendous complexity of the human proteome as expressed at the levels of genes, cells, tissues, individuals, and populations. We review here the field of human proteogenomics, with an emphasis on its history, current implementations, the types of proteomic variations it reveals, and several important applications.

  2. Proteogenomics: Integrating Next-Generation Sequencing and Mass Spectrometry to Characterize Human Proteomic Variation

    PubMed Central

    Sheynkman, Gloria M.; Shortreed, Michael R.; Cesnik, Anthony J.; Smith, Lloyd M.

    2016-01-01

    Mass spectrometry–based proteomics has emerged as the leading method for detection, quantification, and characterization of proteins. Nearly all proteomic workflows rely on proteomic databases to identify peptides and proteins, but these databases typically contain a generic set of proteins that lack variations unique to a given sample, precluding their detection. Fortunately, proteogenomics enables the detection of such proteomic variations and can be defined, broadly, as the use of nucleotide sequences to generate candidate protein sequences for mass spectrometry database searching. Proteogenomics is experiencing heightened significance due to two developments: (a) advances in DNA sequencing technologies that have made complete sequencing of human genomes and transcriptomes routine, and (b) the unveiling of the tremendous complexity of the human proteome as expressed at the levels of genes, cells, tissues, individuals, and populations. We review here the field of human proteogenomics, with an emphasis on its history, current implementations, the types of proteomic variations it reveals, and several important applications. PMID:27049631

  3. Using the phase shift to asymptotically characterize the dipolar mixed modes in post-main-sequence stars

    NASA Astrophysics Data System (ADS)

    Jiang, C.; Christensen-Dalsgaard, J.; Cunha, M.

    2018-03-01

    Mixed modes have been extensively observed in post-main-sequence stars by the Kepler and CoRoT space missions. The mixture of the p and g modes can be measured by the dimensionless coefficient q, the so-called coupling strength factor. In this paper, we discuss the utility of the phase shifts θ from the eigenvalue condition for mixed modes as a tool to characterize dipolar mixed modes from the theoretical as well as the practical point of view. Unlike the coupling strength, whose variation in a given star is very small over the relevant frequency range, the phase shifts vary significantly for different modes. The analysis in terms of θ can also provide a better understanding of the pressure and gravity radial order for a given mixed mode. Observed frequencies of the Kepler red-giant star KIC 3744043 are used to test the method. The results are very promising.

  4. Stellar Variability at the Main-sequence Turnoff of the Intermediate-age LMC Cluster NGC 1846

    NASA Astrophysics Data System (ADS)

    Salinas, R.; Pajkos, M. A.; Vivas, A. K.; Strader, J.; Contreras Ramos, R.

    2018-04-01

    Intermediate-age (IA) star clusters in the Large Magellanic Cloud (LMC) present extended main-sequence turn-offs (MSTO) that have been attributed to either multiple stellar populations or an effect of stellar rotation. Recently it has been proposed that these extended main sequences can also be produced by ill-characterized stellar variability. Here we present Gemini-S/Gemini Multi-Object Spectrometer (GMOS) time series observations of the IA cluster NGC 1846. Using differential image analysis, we identified 73 new variable stars, with 55 of those being of the Delta Scuti type, that is, pulsating variables close the MSTO for the cluster age. Considering completeness and background contamination effects, we estimate the number of δ Sct belonging to the cluster between 40 and 60 members, although this number is based on the detection of a single δ Sct within the cluster half-light radius. This amount of variable stars at the MSTO level will not produce significant broadening of the MSTO, albeit higher-resolution imaging will be needed to rule out variable stars as a major contributor to the extended MSTO phenomenon. Though modest, this amount of δ Sct makes NGC 1846 the star cluster with the highest number of these variables ever discovered. Lastly, our results present a cautionary tale about the adequacy of shallow variability surveys in the LMC (like OGLE) to derive properties of its δ Sct population. Based on observations obtained at the Gemini Observatory, which is operated by the Association of Universities for Research in Astronomy, Inc., under a cooperative agreement with the NSF on behalf of the Gemini partnership: the National Science Foundation (United States), the National Research Council (Canada), CONICYT (Chile), Ministerio de Ciencia, Tecnología e Innovación Productiva (Argentina), and Ministério da Ciência, Tecnologia e Inovação (Brazil).

  5. Heavy Element Abundances in Two B0-B0.5 Main Sequence Stars in the Small Magellanic Cloud

    NASA Astrophysics Data System (ADS)

    Peters, Geraldine J.

    We propose FUSE observations of AV304 (B0.5V) and NGC346-637 B0V), two sharp-lined main-sequence stars in the Small Magellanic Cloud, to determine the abundances of heavy elements, especially those of the iron group. The FUSE spectral region contains numerous Fe III lines, including the resonance multiplet (UV 1) near 1130 Angstroms, that is excellent for abundance determinations and two strong multiplets of V III, an ion that does not produce measurable lines longward of 1200 Angstoms, in metal-deficient stars. In addition there are several measurable lines from Cr III and Mn III. A limited analyses of ground-based spectra of these stars by Dufton et al. (1990) and Rolleston et al. (1993) indicated an average underabundance of 0.7-0.8 dex for most light elements and a recent analysis of HSTSTIS data on AV304 by Peters & Grigsby (2001) suggests that the Fe group elements are depleted by the same amount relative to the sun. When combined with the HST-STIS results, this effort will represent the first attempt to measure the abundances of Fe group elements in the photospheres of early B, main sequence stars in an external galaxy. Although abundances of the Fe-peak elements are of interest because they are important for assessing opacities for stellar evolution calculations and the validity of theoretical calculations of explosive nucleosynthesis, the ground-based study did not yield this information because measurable lines from these species are found only in the UV spectral region. Abundances and abundance ratios of both heavy & light elements will be compared with the HST-STIS results from AV304, H II regions, supernova remnants, evolved massive stars in the SMC, and theoretical calculations of nucleosynthesis.

  6. The Effects of Rotation on the Main-sequence Turnoff of Intermediate-age Massive Star Clusters

    NASA Astrophysics Data System (ADS)

    Yang, Wuming; Bi, Shaolan; Meng, Xiangcun; Liu, Zhie

    2013-10-01

    The double or extended main-sequence turnoffs (MSTOs) in the color-magnitude diagram (CMD) of intermediate-age massive star clusters in the Large Magellanic Cloud are generally interpreted as age spreads of a few hundred Myr. However, such age spreads do not exist in younger clusters (i.e., 40-300 Myr), which challenges this interpretation. The effects of rotation on the MSTOs of star clusters have been studied in previous works, but the results obtained are conflicting. Compared with previous works, we consider the effects of rotation on the main-sequence lifetime of stars. Our calculations show that rotating models have a fainter and redder MSTO with respect to non-rotating counterparts with ages between about 0.8 and 2.2 Gyr, but have a brighter and bluer MSTO when age is larger than 2.4 Gyr. The spread of the MSTO caused by a typical rotation rate is equivalent to the effect of an age spread of about 200 Myr. Rotation could lead to the double or extended MSTOs in the CMD of the star clusters with ages between about 0.8 and 2.2 Gyr. However, the extension is not significant, and it does not even exist in younger clusters. If the efficiency of the mixing were high enough, the effects of the mixing would counteract the effect of the centrifugal support in the late stage of evolution, and the rotationally induced extension would disappear in the old intermediate-age star clusters, but younger clusters would have an extended MSTO. Moreover, the effects of rotation might aid in understanding the formation of some "multiple populations" in globular clusters.

  7. The SCUBA-2 Cosmology Legacy Survey: galaxies in the deep 850 μm survey, and the star-forming `main sequence'

    NASA Astrophysics Data System (ADS)

    Koprowski, M. P.; Dunlop, J. S.; Michałowski, M. J.; Roseboom, I.; Geach, J. E.; Cirasuolo, M.; Aretxaga, I.; Bowler, R. A. A.; Banerji, M.; Bourne, N.; Coppin, K. E. K.; Chapman, S.; Hughes, D. H.; Jenness, T.; McLure, R. J.; Symeonidis, M.; Werf, P. van der

    2016-06-01

    We investigate the properties of the galaxies selected from the deepest 850-μm survey undertaken to date with (Submillimetre Common-User Bolometer Array 2) SCUBA-2 on the James Clerk Maxwell Telescope as part of the SCUBA-2 Cosmology Legacy Survey. A total of 106 sources (>5σ) were uncovered at 850 μm from an area of ≃150 arcmin2 in the centre of the COSMOS/UltraVISTA/Cosmic Assembly Near-infrared Deep Extragalactic Legacy Survey (CANDELS) field, imaged to a typical depth of σ850 ≃ 0.25 mJy. We utilize the available multifrequency data to identify galaxy counterparts for 80 of these sources (75 per cent), and to establish the complete redshift distribution for this sample, yielding bar{z} = 2.38± 0.09. We have also been able to determine the stellar masses of the majority of the galaxy identifications, enabling us to explore their location on the star formation rate:stellar mass (SFR:M*) plane. Crucially, our new deep 850-μm-selected sample reaches flux densities equivalent to SFR ≃ 100 M⊙ yr-1, enabling us to confirm that sub-mm galaxies form the high-mass end of the `main sequence' (MS) of star-forming galaxies at z > 1.5 (with a mean specific SFR of sSFR = 2.25 ± 0.19 Gyr-1 at z ≃ 2.5). Our results are consistent with no significant flattening of the MS towards high masses at these redshifts. However, our results add to the growing evidence that average sSFR rises only slowly at high redshift, resulting in log10sSFR being an apparently simple linear function of the age of the Universe.

  8. New clues to the cause of extended main-sequence turnoffs in intermediate-age star clusters in the Magellanic Clouds

    SciTech Connect

    Correnti, Matteo; Goudfrooij, Paul; Kalirai, Jason S.

    2014-10-01

    We use the Wide Field Camera 3 on board the Hubble Space Telescope (HST) to obtain deep, high-resolution images of two intermediate-age star clusters in the Large Magellanic Cloud of relatively low mass (≈10{sup 4} M {sub ☉}) and significantly different core radii, namely NGC 2209 and NGC 2249. For comparison purposes, we also reanalyzed archival HST images of NGC 1795 and IC 2146, two other relatively low-mass star clusters. From the comparison of the observed color-magnitude diagrams with Monte Carlo simulations, we find that the main-sequence turnoff (MSTO) regions in NGC 2209 and NGC 2249 are significantly wider thanmore » that derived from simulations of simple stellar populations, while those in NGC 1795 and IC 2146 are not. We determine the evolution of the clusters' masses and escape velocities from an age of 10 Myr to the present age. We find that differences among these clusters can be explained by dynamical evolution arguments if the currently extended clusters (NGC 2209 and IC 2146) experienced stronger levels of initial mass segregation than the currently compact ones (NGC 2249 and NGC 1795). Under this assumption, we find that NGC 2209 and NGC 2249 have estimated escape velocities, V {sub esc} ≳ 15 km s{sup –1} at an age of 10 Myr, large enough to retain material ejected by slow winds of first-generation stars, while the two clusters that do not feature extended MSTOs have V {sub esc} ≲ 12 km s{sup –1} at that age. These results suggest that the extended MSTO phenomenon can be better explained by a range of stellar ages rather than a range of stellar rotation velocities or interacting binaries.« less

  9. CAN WE PREDICT THE GLOBAL MAGNETIC TOPOLOGY OF A PRE-MAIN-SEQUENCE STAR FROM ITS POSITION IN THE HERTZSPRUNG-RUSSELL DIAGRAM?

    SciTech Connect

    Gregory, S. G.; Hillenbrand, L. A.; Donati, J.-F.

    2012-08-20

    Zeeman-Doppler imaging studies have shown that the magnetic fields of T Tauri stars can be significantly more complex than a simple dipole and can vary markedly between sources. We collect and summarize the magnetic field topology information obtained to date and present Hertzsprung-Russell (H-R) diagrams for the stars in the sample. Intriguingly, the large-scale field topology of a given pre-main-sequence (PMS) star is strongly dependent upon the stellar internal structure, with the strength of the dipole component of its multipolar magnetic field decaying rapidly with the development of a radiative core. Using the observational data as a basis, we arguemore » that the general characteristics of the global magnetic field of a PMS star can be determined from its position in the H-R diagram. Moving from hotter and more luminous to cooler and less luminous stars across the PMS of the H-R diagram, we present evidence for four distinct magnetic topology regimes. Stars with large radiative cores, empirically estimated to be those with a core mass in excess of {approx}40% of the stellar mass, host highly complex and dominantly non-axisymmetric magnetic fields, while those with smaller radiative cores host axisymmetric fields with field modes of higher order than the dipole dominant (typically, but not always, the octupole). Fully convective stars above {approx}> 0.5 M{sub Sun} appear to host dominantly axisymmetric fields with strong (kilo-Gauss) dipole components. Based on similarities between the magnetic properties of PMS stars and main-sequence M-dwarfs with similar internal structures, we speculate that a bistable dynamo process operates for lower mass stars ({approx}< 0.5 M{sub Sun} at an age of a few Myr) and that they will be found to host a variety of magnetic field topologies. If the magnetic topology trends across the H-R diagram are confirmed, they may provide a new method of constraining PMS stellar evolution models.« less

  10. A VLT/NACO survey for triple and quadruple systems among visual pre-main sequence binaries

    NASA Astrophysics Data System (ADS)

    Correia, S.; Zinnecker, H.; Ratzka, Th.; Sterzik, M. F.

    2006-12-01

    Aims.This paper describes a systematic search for high-order multiplicity among wide visual Pre-Main Sequence (PMS) binaries. Methods: .We conducted an Adaptive Optics survey of a sample of 58 PMS wide binaries from various star-forming regions, which include 52 T Tauri systems with mostly K- and M-type primaries, with the NIR instrument NACO at the VLT. Results: .Of these 52 systems, 7 are found to be triple (2 new) and 7 quadruple (1 new). The new close companions are most likely physically bound based on their probability of chance projection and, for some of them, on their position on a color-color diagram. The corresponding degree of multiplicity among wide binaries (number of triples and quadruples divided by the number of systems) is 26.9 ± 7.2% in the projected separation range ~0.07 arcsec -12'', with the largest contribution from the Taurus-Auriga cloud. We also found that this degree of multiplicity is twice in Taurus compared to Ophiuchus and Chamaeleon for which the same number of sources are present in our sample. Considering a restricted sample composed of systems at distance 140-190 pc, the degree of multiplicity is 26.8 ± 8.1%, in the separation range 10/14 AU-1700/2300 AU (30 binaries, 5 triples, 6 quadruples). The observed frequency agrees with results from previous multiplicity surveys within the uncertainties, although a significant overabundance of quadruple systems compared to triple systems is apparent. Tentatively including the spectroscopic pairs in our restricted sample and comparing the multiplicity fractions to those measured for solar-type main-sequence stars in the solar neighborhood leads to the conclusion that both the ratio of triples to binaries and the ratio of quadruples to triples seems to be in excess among young stars. Most of the current numerical simulations of multiple star formation, and especially smoothed particles hydrodynamics simulations, over-predict the fraction of high-order multiplicity when compared to our

  11. Constraining tidal dissipation in F-type main-sequence stars: the case of CoRoT-11

    NASA Astrophysics Data System (ADS)

    Lanza, A. F.; Damiani, C.; Gandolfi, D.

    2011-05-01

    Context. Tidal dissipation in late-type stars is presently poorly understood and the study of planetary systems hosting hot Jupiters can provide new observational constraints to test proposed theories. Aims: We focus on systems with F-type main-sequence stars and find that the recently discovered system CoRoT-11 is presently the best suited for this kind of investigation. Methods: A classic constant tidal lag model is applied to reproduce the evolution of the system from a plausible nearly synchronous state on the zero-age main sequence (ZAMS) to the present state, thus putting constraints on the average modified tidal quality factor < Q_s' > of its F6V star.Initial conditions with the stellar rotation period longer than the orbital period of the planet can be excluded on the basis of the presently observed state in which the star spins faster than the planet orbit. Results: It is found that 4 × 106 ≲ < Q_s' > ≲ 2 × 107, if the system started its evolution on the ZAMS close to synchronization, with an uncertainty related to the constant tidal lag hypothesis and the estimated stellar magnetic braking within a factor of ≈5-6.For a non-synchronous initial state of the system, < Qs' > ≲ 4 × 106 implies an age younger than ~1 Gyr, while < Q_s' > ≳ 2 × 107 may be tested by comparing the theoretically derived initial orbital and stellar rotation periods with those of a sample of observed systems. Moreover, we discuss how the present value of Qs' can be measured by a timing of the mid-epoch and duration of the transits as well as of the planetary eclipses to be observed in the infrared with an accuracy of ~0.5-1 s over a time baseline of ~25 yr. Conclusions: CoRoT-11 is a highly interesting system that potentially allows us a direct measure of the tidal dissipation in an F-type star as well as the detection of the precession of the orbital plane of the planet that provides us with an accurate upper limit for the obliquity of the stellar equator. If the

  12. Dust Attenuation, Bulge Formation, and Inside-out Quenching of Star Formation in Star-forming Main Sequence Galaxies at z ∼ 2

    NASA Astrophysics Data System (ADS)

    Tacchella, S.; Carollo, C. M.; Förster Schreiber, N. M.; Renzini, A.; Dekel, A.; Genzel, R.; Lang, P.; Lilly, S. J.; Mancini, C.; Onodera, M.; Tacconi, L. J.; Wuyts, S.; Zamorani, G.

    2018-05-01

    We derive 2D dust attenuation maps at ∼1 kpc resolution from the UV continuum for 10 galaxies on the z ∼ 2 star-forming main sequence (SFMS). Comparison with IR data shows that 9 out of 10 galaxies do not require further obscuration in addition to the UV-based correction, though our sample does not include the most heavily obscured, massive galaxies. The individual rest-frame V-band dust attenuation (A V) radial profiles scatter around an average profile that gently decreases from ∼1.8 mag in the center down to ∼0.6 mag at ∼3–4 half-mass radii. We use these maps to correct UV- and Hα-based star formation rates (SFRs), which agree with each other. At masses ≲ {10}11 {M}ȯ , the dust-corrected specific SFR (sSFR) profiles are on average radially constant at a mass-doubling timescale of ∼300 Myr, pointing at a synchronous growth of bulge and disk components. At masses ≳ {10}11 {M}ȯ , the sSFR profiles are typically centrally suppressed by a factor of ∼10 relative to the galaxy outskirts. With total central obscuration disfavored, this indicates that at least a fraction of massive z ∼ 2 SFMS galaxies have started their inside-out star formation quenching that will move them to the quenched sequence. In combination with other observations, galaxies above and below the ridge of the SFMS relation have, respectively, centrally enhanced and centrally suppressed sSFRs relative to their outskirts, supporting a picture where bulges are built owing to gas “compaction” that leads to a high central SFR as galaxies move toward the upper envelope of the SFMS. Based on observations made with the NASA/ESA Hubble Space Telescope, obtained at the Space Telescope Science Institute, which is operated under NASA contract NAS 5‑26555 (programs GO9822, GO10092, GO10924, GO11694, GO12578, GO12060, GO12061, GO12062, GO12063, GO12064, GO12440, GO12442, GO12443, GO12444, GO12445, GO13669), and at the Very Large Telescope of the European Southern Observatory

  13. The evolution of surface magnetic fields in young solar-type stars II: the early main sequence (250-650 Myr)

    NASA Astrophysics Data System (ADS)

    Folsom, C. P.; Bouvier, J.; Petit, P.; Lèbre, A.; Amard, L.; Palacios, A.; Morin, J.; Donati, J.-F.; Vidotto, A. A.

    2018-03-01

    There is a large change in surface rotation rates of sun-like stars on the pre-main sequence and early main sequence. Since these stars have dynamo-driven magnetic fields, this implies a strong evolution of their magnetic properties over this time period. The spin-down of these stars is controlled by interactions between stellar and magnetic fields, thus magnetic evolution in turn plays an important role in rotational evolution. We present here the second part of a study investigating the evolution of large-scale surface magnetic fields in this critical time period. We observed stars in open clusters and stellar associations with known ages between 120 and 650 Myr, and used spectropolarimetry and Zeeman Doppler Imaging to characterize their large-scale magnetic field strength and geometry. We report 15 stars with magnetic detections here. These stars have masses from 0.8 to 0.95 M⊙, rotation periods from 0.326 to 10.6 d, and we find large-scale magnetic field strengths from 8.5 to 195 G with a wide range of geometries. We find a clear trend towards decreasing magnetic field strength with age, and a power law decrease in magnetic field strength with Rossby number. There is some tentative evidence for saturation of the large-scale magnetic field strength at Rossby numbers below 0.1, although the saturation point is not yet well defined. Comparing to younger classical T Tauri stars, we support the hypothesis that differences in internal structure produce large differences in observed magnetic fields, however for weak-lined T Tauri stars this is less clear.

  14. Optical spectroscopy of X-ray sources in the Taurus molecular cloud: discovery of ten new pre-main sequence stars

    NASA Astrophysics Data System (ADS)

    Scelsi, L.; Sacco, G.; Affer, L.; Argiroffi, C.; Pillitteri, I.; Maggio, A.; Micela, G.

    2008-11-01

    Aims: We have analyzed optical spectra of 25 X-ray sources identified as potential new members of the Taurus molecular cloud (TMC), in order to confirm their membership in this star-forming region. Methods: Fifty-seven candidate members were previously selected among the X-ray sources in the XEST survey, having a 2MASS counterpart compatible with a pre-main sequence star based on color-magnitude and color-color diagrams. We obtained high-resolution optical spectra for 7 of these candidates with the SARG spectrograph at the TNG telescope, which were used to search for lithium absorption and to measure the Hα line and the radial and rotational velocities. Then, 18 low-resolution optical spectra obtained with the instrument DOLORES for other candidate members were used for spectral classification, for Hα measurements, and to assess membership together with IR color-color and color-magnitude diagrams and additional information from the X-ray data. Results: We found that 3 sources show lithium absorption, with equivalent widths (EWs) of 500 mÅ, broad spectral line profiles, indicating rotational velocities of 20{-}40 km s-1, radial velocities consistent with those for known members, and Hα emission. Two of them are classified as new weak-lined T Tauri stars, while the EW ( -9 Å) of the Hα line and its broad asymmetric profile clearly indicate that the third star (XEST-26-062) is a classical T Tauri star. Fourteen sources observed with DOLORES are M-type stars. Fifteen sources show Hα emission. Six of them have spectra that indicate surface gravity lower than in main sequence stars, and their de-reddened positions in IR color-magnitude diagrams are consistent with their derived spectral type and with pre-main sequence models at the distance of the TMC. The K-type star XEST-11-078 is confirmed as a new member on the basis of the strength of the Hα emission line. Overall, we confirm membership to the TMC for 10 out of 25 X-ray sources observed in the optical. Three

  15. The properties and environment of primitive solar nebulae as deduced from observations of solar-type pre-main sequence stars

    NASA Technical Reports Server (NTRS)

    Strom, Stephen E.; Edwards, Suzan; Strom, Karen M.

    1991-01-01

    The following topics were discussed: (1) current observation evidence for the presence of circumstellar disks associated with solar type pre-main sequence (PMS) stars; (2) the properties of such disks; and (3) the disk environment.

  16. Peptides derivatized with bicyclic quaternary ammonium ionization tags. Sequencing via tandem mass spectrometry.

    PubMed

    Setner, Bartosz; Rudowska, Magdalena; Klem, Ewelina; Cebrat, Marek; Szewczuk, Zbigniew

    2014-10-01

    Improving the sensitivity of detection and fragmentation of peptides to provide reliable sequencing of peptides is an important goal of mass spectrometric analysis. Peptides derivatized by bicyclic quaternary ammonium ionization tags: 1-azabicyclo[2.2.2]octane (ABCO) or 1,4-diazabicyclo[2.2.2]octane (DABCO), are characterized by an increased detection sensitivity in electrospray ionization mass spectrometry (ESI-MS) and longer retention times on the reverse-phase (RP) chromatography columns. The improvement of the detection limit was observed even for peptides dissolved in 10 mM NaCl. Collision-induced dissociation tandem mass spectrometry of quaternary ammonium salts derivatives of peptides showed dominant a- and b-type ions, allowing facile sequencing of peptides. The bicyclic ionization tags are stable in collision-induced dissociation experiments, and the resulted fragmentation pattern is not significantly influenced by either acidic or basic amino acid residues in the peptide sequence. Obtained results indicate the general usefulness of the bicyclic quaternary ammonium ionization tags for ESI-MS/MS sequencing of peptides. Copyright © 2014 John Wiley & Sons, Ltd.

  17. From CoRoT 102899501 to the Sun. A time evolution model of chromospheric activity on the main sequence

    NASA Astrophysics Data System (ADS)

    Gondoin, P.; Gandolfi, D.; Fridlund, M.; Frasca, A.; Guenther, E. W.; Hatzes, A.; Deeg, H. J.; Parviainen, H.; Eigmüller, P.; Deleuil, M.

    2012-12-01

    Aims: The present study reports measurements of the rotation period of a young solar analogue, estimates of its surface coverage by photospheric starspots and of its chromospheric activity level, and derivations of its evolutionary status. Detailed observations of many young solar-type stars, such as the one reported in the present paper, provide insight into rotation and magnetic properties that may have prevailed on the Sun in its early evolution. Methods: Using a model based on the rotational modulation of the visibility of active regions, we analysed the high-accuracy CoRoT lightcurve of the active star CoRoT 102899501. Spectroscopic follow-up observations were used to derive its fundamental parameters. We compared the chromospheric activity level of Corot 102899501 with the R'HK index distribution vs age established on a large sample of solar-type dwarfs in open clusters. We also compared the chromospheric activity level of this young star with a model of chromospheric activity evolution established by combining relationships between the R'HK index and the Rossby number with a recent model of stellar rotation evolution on the main sequence. Results: We measure the spot coverage of the stellar surface as a function of time and find evidence for a tentative increase from 5 - 14% at the beginning of the observing run to 13-29% 35 days later. A high level of magnetic activity on Corot 102899501 is corroborated by a strong emission in the Balmer and Ca ii H and K lines (R'HK ~ -4). The starspots used as tracers of the star rotation constrain the rotation period to 1.625 ± 0.002 days and do not show evidence for differential rotation. The effective temperature (Teff = 5180 ± 80 K), surface gravity (log g = 4.35 ± 0.1), and metallicity ([M/H] = 0.05 ± 0.07 dex) indicate that the object is located near the evolutionary track of a 1.09 ± 0.12 M⊙ pre-main sequence star at an age of 23 ± 10 Myr. This value is consistent with the "gyro-age" of about 8-25 Myr

  18. Using A New Model for Main Sequence Turnoff Absolute Magnitudes to Measure Stellar Streams in the Milky Way Halo

    NASA Astrophysics Data System (ADS)

    Weiss, Jake; Newberg, Heidi Jo; Arsenault, Matthew; Bechtel, Torrin; Desell, Travis; Newby, Matthew; Thompson, Jeffery M.

    2016-01-01

    Statistical photometric parallax is a method for using the distribution of absolute magnitudes of stellar tracers to statistically recover the underlying density distribution of these tracers. In previous work, statistical photometric parallax was used to trace the Sagittarius Dwarf tidal stream, the so-called bifurcated piece of the Sagittaritus stream, and the Virgo Overdensity through the Milky Way. We use an improved knowledge of this distribution in a new algorithm that accounts for the changes in the stellar population of color-selected stars near the photometric limit of the Sloan Digital Sky Survey (SDSS). Although we select bluer main sequence turnoff stars (MSTO) as tracers, large color errors near the survey limit cause many stars to be scattered out of our selection box and many fainter, redder stars to be scattered into our selection box. We show that we are able to recover parameters for analogues of these streams in simulated data using a maximum likelihood optimization on MilkyWay@home. We also present the preliminary results of fitting the density distribution of major Milky Way tidal streams in SDSS data. This research is supported by generous gifts from the Marvin Clan, Babette Josephs, Manit Limlamai, and the MilkyWay@home volunteers.

  19. First discovery of a magnetic field in a main-sequence δ Scuti star: the Kepler star HD 188774

    NASA Astrophysics Data System (ADS)

    Neiner, C.; Lampens, P.

    2015-11-01

    The Kepler space mission provided a wealth of δ Sct-γ Dor hybrid candidates. While some may be genuine hybrids, others might be misclassified due to the presence of a binary companion or to rotational modulation caused by magnetism and related surface inhomogeneities. In particular, the Kepler δ Sct-γ Dor hybrid candidate HD 188774 shows a few low frequencies in its light and radial velocity curves, whose origin is unclear. In this work, we check for the presence of a magnetic field in HD 188774. We obtained two spectropolarimetric measurements with an Echelle SpectroPolarimetric Device for the Observation of Stars (ESPaDOnS) at Canada-France-Hawaii Telescope. The data were analysed with the least-squares deconvolution (LSD) method. We detected a clear magnetic signature in the Stokes V LSD profiles. The origin of the low frequencies detected in HD 188774 is therefore most probably the rotational modulation of surface spots possibly related to the presence of a magnetic field. Consequently, HD 188774 is not a genuine hybrid δ Sct-γ Dor star, but the first known magnetic main-sequence δ Sct star. This makes it a prime target for future asteroseismic and spot modelling. This result casts new light on the interpretation of the Kepler results for other δ Sct-γ Dor hybrid candidates.

  20. Rates and delay times of Type Ia supernovae in the helium-enriched main-sequence donor scenario

    NASA Astrophysics Data System (ADS)

    Liu, Zheng-Wei; Stancliffe, Richard J.

    2018-04-01

    The nature of the progenitors of Type Ia supernovae (SNe Ia) remains a mystery. Comparing theoretical rates and delay-time distributions of SNe Ia with those inferred observationally can constrain their progenitor models. In this work, taking thermohaline mixing into account in the helium-enriched main-sequence (HEMS) donor scenario, we address rates and delay times of SNe Ia in this channel by combining the results of self-consistent binary evolution calculations with population synthesis models. We find that the Galactic SN Ia rate from the HEMS donor scenario is around 0.6-1.2 × 10-3 yr-1, which is about 30 per cent of the observed rate. Delay times of SNe Ia in this scenario cover a wide range of 0.1-1.0 Gyr. We also present the pre-explosion properties of companion stars in the HEMS donor scenario, which will be helpful for placing constraints on SN Ia progenitors through analysing their pre-explosion images.

  1. Chemically-dissected Rotation Curves of the Galactic Bulge from Hubble Space Telescope Proper Motions on the Main Sequence

    NASA Astrophysics Data System (ADS)

    Clarkson, William I.; Calamida, Annalisa; Sahu, Kailash C.; Gennaro, Mario; Brown, Thomas M.; Avila, Roberto J.; Rich, R. Michael; Debattista, Victor P.

    2018-01-01

    We report results from a pilot study using archival Hubble Space Telescope imaging observations in seven filters over a multi-year time-baseline to probe the co-dependence of chemical abundance and kinematics, using proper motion-based rotation curves selected on relative metallicity. With spectroscopic studies suggesting the metallicity distribution of the Bulge may be bimodal, we follow a data-driven approach to classify stars as belonging to metal-rich or metal-poor ends of the observed relative photometric metallicity distribution, with classification implemented using standard unsupervised learning techniques. We detect clear differences in both slope and amplitude of the proper motion-based rotation curve as traced by the more “metal-rich” and “metal-poor” samples. The sense of the discrepancy is qualitatively in agreement both with recent observational and theoretical indications; the “metal-poor” sample does indeed show a weaker rotation signature.This is the first study to dissect the proper motion rotation curve of the Bulge by chemical abundance using main-sequence targets, which are orders of magnitude more common on the sky than bright giants. These techniques thus offer a pencil-beam complement to wide-field studies that use more traditional tracer populations.

  2. AK Sco, First Detection of a Highly Disturbed Atmosphere in a Pre-Main-Sequence Close Binary

    NASA Astrophysics Data System (ADS)

    Gómez de Castro, Ana I.

    2009-06-01

    AK Sco is a unique source: a ~10 Myr old pre-main-sequence (PMS) spectroscopic binary composed of two nearly equal F5 stars that at periastron are separated by barely 11 stellar radii, so the stellar magnetospheres fill the Roche lobe at periastron. The orbit is not yet circularized (e = 0.47) and very strong tides are expected. This makes AK Sco the ideal laboratory to study the effect of gravitational tides in the stellar magnetic field building up during PMS evolution. In this Letter, the detection of a highly disturbed (σ sime 100 km s-1) and very dense atmosphere (n e = 1.6 × 1010 cm-3) is reported. Significant line broadening blurs any signs of ion belts or bow shocks in the spectrum of the atmospheric plasma. The radiative losses cannot be accounted for solely by the dissipation of energy from the tidal wave propagating in the stellar atmosphere or by the accreting material. The release of internal energy from the star seems to be the most likely source of the plasma heating. This is the first clear indication of a highly disturbed atmosphere surrounding a PMS close binary.

  3. THE SOLAR NEIGHBORHOOD. XXVI. AP Col: THE CLOSEST (8.4 pc) PRE-MAIN-SEQUENCE STAR

    SciTech Connect

    Riedel, Adric R.; Henry, Todd J.; Jao, Wei-Chun

    2011-10-15

    We present the results of a multi-technique investigation of the M4.5Ve flare star AP Col, which we discover to be the nearest pre-main-sequence star. These include astrometric data from the CTIO 0.9 m, from which we derive a proper motion of 342.0 {+-} 0.5 mas yr{sup -1}, a trigonometric parallax of 119.21 {+-} 0.98 mas (8.39 {+-} 0.07 pc), and photometry and photometric variability at optical wavelengths. We also provide spectroscopic data, including radial velocity (22.4 {+-} 0.3 km s{sup -1}), lithium equivalent width (EW) (0.28 {+-} 0.02 A), H{alpha} EW (-6.0 to -35 A), vsin i (11 {+-} 1more » km s{sup -1}), and gravity indicators from the Siding Spring 2.3 m WiFeS, Lick 3 m Hamilton echelle, and Keck-I HIRES echelle spectrographs. The combined observations demonstrate that AP Col is the closer of only two known systems within 10 pc of the Sun younger than 100 Myr. Given its space motion and apparent age of 12-50 Myr, AP Col is likely a member of the recently proposed {approx}40 Myr old Argus/IC 2391 Association.« less

  4. Evaluating gyrochronology on the zero-age-main-sequence: rotation periods in the southern open cluster Blanco 1 from the Kelt-South survey

    SciTech Connect

    Cargile, P. A.; Pepper, J.; Siverd, R.

    2014-02-10

    We report periods for 33 members of Blanco 1 as measured from Kilodegree Extremely Little Telescope-South light curves, the first reported rotation periods for this benchmark zero-age-main-sequence open cluster. The distribution of these stars spans from late-A or early-F dwarfs to mid-K with periods ranging from less than a day to ∼8 days. The rotation period distribution has a morphology similar to the coeval Pleiades cluster, suggesting the universal nature of stellar rotation distributions. Employing two different gyrochronology methods, we find an age of 146{sub −14}{sup +13} Myr for the cluster. Using the same techniques, we infer an age ofmore » 134{sub −10}{sup +9} Myr for the Pleiades measured from existing literature rotation periods. These rotation-derived ages agree with independently determined cluster ages based on the lithium depletion boundary technique. Additionally, we evaluate different gyrochronology models and quantify levels of agreement between the models and the Blanco 1/Pleiades rotation period distributions, including incorporating the rotation distributions of clusters at ages up to 1.1 Gyr. We find the Skumanich-like spin-down rate sufficiently describes the rotation evolution of stars hotter than the Sun; however, we find cooler stars rotating faster than predicted by a Skumanich law, suggesting a mass dependence in the efficiency of stellar angular momentum loss rate. Finally, we compare the Blanco 1 and Pleiades rotation period distributions to available nonlinear angular momentum evolution models. We find they require a significant mass dependence on the initial rotation rate of solar-type stars to reproduce the observed range of rotation periods at a given stellar mass and are furthermore unable to predict the observed over-density of stars along the upper envelope of the clusters' rotation distributions.« less

  5. SEARCHING FOR YOUNG JUPITER ANALOGS AROUND AP COL: L-BAND HIGH-CONTRAST IMAGING OF THE CLOSEST PRE-MAIN-SEQUENCE STAR

    SciTech Connect

    Quanz, Sascha P.; Avenhaus, Henning; Meyer, Michael R.

    2012-08-01

    The nearby M-dwarf AP Col was recently identified by Riedel et al. as a pre-main-sequence star (age 12-50 Myr) situated only 8.4 pc from the Sun. The combination of its youth, distance, and intrinsically low luminosity make it an ideal target to search for extrasolar planets using direct imaging. We report deep adaptive optics observations of AP Col taken with VLT/NACO and Keck/NIRC2 in the L band. Using aggressive speckle suppression and background subtraction techniques, we are able to rule out companions with mass m {>=} 0.5-1 M{sub Jup} for projected separations a > 4.5 AU, and m {>=} 2more » M{sub Jup} for projected separations as small as 3 AU, assuming an age of 40 Myr using the COND theoretical evolutionary models. Using a different set of models, the mass limits increase by a factor of {approx}>2. The observations presented here are the deepest mass-sensitivity limits yet achieved within 20 AU on a star with direct imaging. While Doppler radial velocity surveys have shown that Jovian bodies with close-in orbits are rare around M-dwarfs, gravitational microlensing studies predict that 17{sup +6}{sub -9}% of these stars host massive planets with orbital separations of 1-10 AU. Sensitive high-contrast imaging observations, like those presented here, will help to validate results from complementary detection techniques by determining the frequency of gas giant planets on wide orbits around M-dwarfs.« less

  6. Modeling of Camembert-type cheese mass loss in a ripening chamber: main biological and physical phenomena.

    PubMed

    Hélias, A; Mirade, P-S; Corrieu, G

    2007-11-01

    A model of the mass loss of Camembert-type cheese was established with data obtained from 2 experimental ripening trials carried out in 2 pilot ripening chambers. During these experiments, a cheese was continuously weighed and the relative humidity, temperature, oxygen, and carbon dioxide concentrations in the ripening chamber were recorded online. The aim was to establish a simple but accurate model that would predict cheese mass changes according to available online measurements. The main hypotheses were that 1) the cheese water activity was constant during ripening, 2) the respiratory activity of the microflora played a major role by inducing heat production, combined with important water evaporation, 3) the temperature gradient existing inside the cheese was negligible, and the limiting phenomenon was the convective transfer. The water activity and the specific heat of the cheeses were assessed by offline measurements. The others parameters in the model were obtained from the literature. This dynamic model was built with 2 state variables: the cheese mass and the surface temperature of the cheese. In this way, only the heat transfer coefficient had to be fitted, and it was strongly determined by the airflow characteristics close to the cheeses. Model efficiency was illustrated by comparing the estimated and measured mass and the mass loss rate for the 2 studied runs; the relative errors were less than 1.9 and 3.2% for the mass loss and the mass loss rate, respectively. The dynamic effects of special events, such as room defrosting or changes in chamber relative humidity, were well described by the model, especially in terms of kinetics (mass loss rates).

  7. Bromine isotopic signature facilitates de novo sequencing of peptides in free-radical-initiated peptide sequencing (FRIPS) mass spectrometry.

    PubMed

    Nam, Jungjoo; Kwon, Hyuksu; Jang, Inae; Jeon, Aeran; Moon, Jingyu; Lee, Sun Young; Kang, Dukjin; Han, Sang Yun; Moon, Bongjin; Oh, Han Bin

    2015-02-01

    We recently showed that free-radical-initiated peptide sequencing mass spectrometry (FRIPS MS) assisted by the remarkable thermochemical stability of (2,2,6,6-tetramethyl-piperidin-1-yl)oxyl (TEMPO) is another attractive radical-driven peptide fragmentation MS tool. Facile homolytic cleavage of the bond between the benzylic carbon and the oxygen of the TEMPO moiety in o-TEMPO-Bz-C(O)-peptide and the high reactivity of the benzylic radical species generated in •Bz-C(O)-peptide are key elements leading to extensive radical-driven peptide backbone fragmentation. In the present study, we demonstrate that the incorporation of bromine into the benzene ring, i.e. o-TEMPO-Bz(Br)-C(O)-peptide, allows unambiguous distinction of the N-terminal peptide fragments from the C-terminal fragments through the unique bromine doublet isotopic signature. Furthermore, bromine substitution does not alter the overall radical-driven peptide backbone dissociation pathways of o-TEMPO-Bz-C(O)-peptide. From a practical perspective, the presence of the bromine isotopic signature in the N-terminal peptide fragments in TEMPO-assisted FRIPS MS represents a useful and cost-effective opportunity for de novo peptide sequencing. Copyright © 2015 John Wiley & Sons, Ltd.

  8. Shotgun protein sequencing: assembly of peptide tandem mass spectra from mixtures of modified proteins.

    PubMed

    Bandeira, Nuno; Clauser, Karl R; Pevzner, Pavel A

    2007-07-01

    Despite significant advances in the identification of known proteins, the analysis of unknown proteins by MS/MS still remains a challenging open problem. Although Klaus Biemann recognized the potential of MS/MS for sequencing of unknown proteins in the 1980s, low throughput Edman degradation followed by cloning still remains the main method to sequence unknown proteins. The automated interpretation of MS/MS spectra has been limited by a focus on individual spectra and has not capitalized on the information contained in spectra of overlapping peptides. Indeed the powerful shotgun DNA sequencing strategies have not been extended to automated protein sequencing. We demonstrate, for the first time, the feasibility of automated shotgun protein sequencing of protein mixtures by utilizing MS/MS spectra of overlapping and possibly modified peptides generated via multiple proteases of different specificities. We validate this approach by generating highly accurate de novo reconstructions of multiple regions of various proteins in western diamondback rattlesnake venom. We further argue that shotgun protein sequencing has the potential to overcome the limitations of current protein sequencing approaches and thus catalyze the otherwise impractical applications of proteomics methodologies in studies of unknown proteins.

  9. Method and apparatus for enhanced sequencing of complex molecules using surface-induced dissociation in conjunction with mass spectrometric analysis

    DOEpatents

    Laskin, Julia [Richland, WA; Futrell, Jean H [Richland, WA

    2008-04-29

    The invention relates to a method and apparatus for enhanced sequencing of complex molecules using surface-induced dissociation (SID) in conjunction with mass spectrometric analysis. Results demonstrate formation of a wide distribution of structure-specific fragments having wide sequence coverage useful for sequencing and identifying the complex molecules.

  10. The Problem of Hipparcos Distances to Open Clusters. Report 1; Constraints from Multicolor a Main-Sequence Fitting

    NASA Technical Reports Server (NTRS)

    Pinsonneault, Marc H.; Stauffer, John; Soderblom, David R.; King, Jeremy R.; Hanson, Robert B.

    1998-01-01

    Parallax data from the Hipparcos mission allow the direct distance to open clusters to be compared with the distance inferred from main-sequence (MS) fitting. There are surprising differences between the two distance measurements. indicating either the need for changes in the cluster compositions or reddening, underlying problems with the technique of MS fitting, or systematic errors in the Hipparcos parallaxes at the 1 mas level. We examine the different possibilities, focusing on MS fitting in both metallicity-sensitive B-V and metallicity-insensitive V-I for five well-studied systems (the Hyades, Pleiades, alpha Per, Praesepe, and Coma Ber). The Hipparcos distances to the Hyades and alpha Per are within 1 sigma of the MS-fitting distance in B-V and V-I, while the Hipparcos distances to Coma Ber and the Pleiades are in disagreement with the MS-fitting distance at more than the 3 sigma level. There are two Hipparcos measurements of the distance to Praesepe; one is in good agreement with the MS-fitting distance and the other disagrees at the 2 sigma level. The distance estimates from the different colors are in conflict with one another for Coma but in agreement for the Pleiades. Changes in the relative cluster metal abundances, age related effects, helium, and reddening are shown to be unlikely to explain the puzzling behavior of the Pleiades. We present evidence for spatially dependent systematic errors at the 1 mas level in the parallaxes of Pleiades stars. The implications of this result are discussed.

  11. De Novo Peptide Sequencing: Deep Mining of High-Resolution Mass Spectrometry Data.

    PubMed

    Islam, Mohammad Tawhidul; Mohamedali, Abidali; Fernandes, Criselda Santan; Baker, Mark S; Ranganathan, Shoba

    2017-01-01

    High resolution mass spectrometry has revolutionized proteomics over the past decade, resulting in tremendous amounts of data in the form of mass spectra, being generated in a relatively short span of time. The mining of this spectral data for analysis and interpretation though has lagged behind such that potentially valuable data is being overlooked because it does not fit into the mold of traditional database searching methodologies. Although the analysis of spectra by de novo sequences removes such biases and has been available for a long period of time, its uptake has been slow or almost nonexistent within the scientific community. In this chapter, we propose a methodology to integrate de novo peptide sequencing using three commonly available software solutions in tandem, complemented by homology searching, and manual validation of spectra. This simplified method would allow greater use of de novo sequencing approaches and potentially greatly increase proteome coverage leading to the unearthing of valuable insights into protein biology, especially of organisms whose genomes have been recently sequenced or are poorly annotated.

  12. RoboOligo: software for mass spectrometry data to support manual and de novo sequencing of post-transcriptionally modified ribonucleic acids

    PubMed Central

    Sample, Paul J.; Gaston, Kirk W.; Alfonzo, Juan D.; Limbach, Patrick A.

    2015-01-01

    Ribosomal ribonucleic acid (RNA), transfer RNA and other biological or synthetic RNA polymers can contain nucleotides that have been modified by the addition of chemical groups. Traditional Sanger sequencing methods cannot establish the chemical nature and sequence of these modified-nucleotide containing oligomers. Mass spectrometry (MS) has become the conventional approach for determining the nucleotide composition, modification status and sequence of modified RNAs. Modified RNAs are analyzed by MS using collision-induced dissociation tandem mass spectrometry (CID MS/MS), which produces a complex dataset of oligomeric fragments that must be interpreted to identify and place modified nucleosides within the RNA sequence. Here we report the development of RoboOligo, an interactive software program for the robust analysis of data generated by CID MS/MS of RNA oligomers. There are three main functions of RoboOligo: (i) automated de novo sequencing via the local search paradigm. (ii) Manual sequencing with real-time spectrum labeling and cumulative intensity scoring. (iii) A hybrid approach, coined ‘variable sequencing’, which combines the user intuition of manual sequencing with the high-throughput sampling of automated de novo sequencing. PMID:25820423

  13. Chandra and HST Observations of the High Energy (X-ray/UV) Radiation Fields for an Evolutionary Sequence of Pre-Main-Sequence Stars

    NASA Astrophysics Data System (ADS)

    Brown, Alexander; Herczeg, G. J.; Brown, J. M.; Walter, F. M.; Valenti, J.; Ardila, D.; Hillenbrand, L. A.; Edwards, S.; Johns-Krull, C. M.; Alexander, R.; Bergin, E. A.; Calvet, N.; Bethell, T. J.; Ingleby, L.; Bary, J. S.; Audard, M.; Baldovin, C.; Roueff, E.; Abgrall, H.; Gregory, S. G.; Ayres, T. R.; Linsky, J. L.

    2010-03-01

    Pre-main-sequence (PMS) stars are strong X-ray and UV emitters and the high energy radiation from the central stars directly influences the physical and chemical processes in their protoplanetary disks. Gas and dust in protoplanetary systems are excited by these photons, which are the dominant ionization source for hundreds of AU around the star. X-rays penetrate deep into disks and power complex chemistry on grain surfaces. ``Transitional disks'' are an important short-lived evolutionary stage for PMS stars and protoplanetary systems. These disks have transformed most of the dust and gas in their inner regions into planetesimals or larger solid bodies. As dust disks disappear after ages of roughly 5 Myr high levels of stellar magnetic activity persist and continue to bathe the newly-forming protoplanetary systems with intense high energy radiation. We present new X-ray and UV spectra for a sample of PMS stars at a variety of evolutionary stages, including the classical T Tauri stars DE Tau and DK Tau, the transitional disk stars GM Aur and HD135344B, the Herbig Ae star HD104237, and the weak-lined T Tauri star LkCa4, the Eta Cha cluster [age 7 Myr] members RECX1, RECX-11, and RECX-15, and TW Hya association [age 8 Myr] member TWA-2. These include the first results from our 111 orbit HST Large project and associated X-ray data. New and archival Chandra, XMM, and Swift X-ray spectra and HST COS+STIS FUV spectra are being used to reconstruct the full high energy (X-ray/EUV/FUV/NUV) spectra of these stars, thus allowing detailed modeling of the physics and chemistry of their circumstellar environments. The UV spectra provide improved emission line profiles revealing details of the magnetically-heated plasma and accretion and outflow processes. This work is supported by Chandra grants GO8-9024X, GO9-0015X and GO9-0020B and proposal 11200754 and HST GO grants 11336, 11616, and 11828.

  14. Effects of temperature and mass conservation on the typical chemical sequences of hydrogen oxidation

    NASA Astrophysics Data System (ADS)

    Nicholson, Schuyler B.; Alaghemandi, Mohammad; Green, Jason R.

    2018-01-01

    Macroscopic properties of reacting mixtures are necessary to design synthetic strategies, determine yield, and improve the energy and atom efficiency of many chemical processes. The set of time-ordered sequences of chemical species are one representation of the evolution from reactants to products. However, only a fraction of the possible sequences is typical, having the majority of the joint probability and characterizing the succession of chemical nonequilibrium states. Here, we extend a variational measure of typicality and apply it to atomistic simulations of a model for hydrogen oxidation over a range of temperatures. We demonstrate an information-theoretic methodology to identify typical sequences under the constraints of mass conservation. Including these constraints leads to an improved ability to learn the chemical sequence mechanism from experimentally accessible data. From these typical sequences, we show that two quantities defining the variational typical set of sequences—the joint entropy rate and the topological entropy rate—increase linearly with temperature. These results suggest that, away from explosion limits, data over a narrow range of thermodynamic parameters could be sufficient to extrapolate these typical features of combustion chemistry to other conditions.

  15. Accretion and Magnetic Reconnection in the Pre-Main Sequence Binary DQ Tau as Revealed through High-Cadence Optical Photometry

    NASA Astrophysics Data System (ADS)

    Tofflemire, Benjamin M.; Mathieu, Robert D.; Ardila, David R.; Akeson, Rachel L.; Ciardi, David R.; Herczeg, Gregory; Johns-Krull, Christopher M.; Vodniza, Alberto

    2016-01-01

    Protostellar disks are integral to the formation and evolution of low-mass stars and planets. A paradigm for the star-disk interaction has been extensively developed through theory and observation in the case of single stars. Most stars, however, form in binaries or higher order systems where the distribution of disk material and mass flows are more complex. Pre-main sequence (PMS) binary stars can have up to three accretion disks: two circumstellar disks and a circumbinary disk separated by a dynamically cleared gap. Theory suggests that mass may periodically flow in an accretion stream from a circumbinary disk across the gap onto circumstellar disks or stellar surfaces.The archetype for this theory is the eccentric, PMS binary DQ Tau. Moderate-cadence broadband photometry (~10 observations per orbital period) has shown pulsed brightening events near most periastron passages, just as numerical simulations would predict for a binary of similar orbital parameters. While this observed behavior supports the accretion stream theory, it is not exclusive to variable accretion rates. Magnetic reconnection events (flares) during the collision of stellar magnetospheres at periastron (when separated by 8 stellar radii) could produce the same periodic, broadband behavior when observed at a one-day cadence. Further evidence for magnetic activity comes from gyrosynchrotron, radio flares (typical of stellar flares) observed near multiple periastron passages. To reveal the physical mechanism seen in DQ Tau's moderate-cadence observations, we have obtained continuous, moderate-cadence, multi-band photometry over 10 orbital periods (LCOGT 1m network), supplemented with 32 nights of minute-cadence photometry centered on 4 separate periastron passages (WIYN 0.9m; APO ARCSAT). With detailed lightcurve morphologies we distinguish between the gradual rise and fall on multi-day time-scales predicted by the accretion stream theory and the hour time-scale, rapid-rise and exponential

  16. Estimation of submarine mass failure probability from a sequence of deposits with age dates

    USGS Publications Warehouse

    Geist, Eric L.; Chaytor, Jason D.; Parsons, Thomas E.; ten Brink, Uri S.

    2013-01-01

    The empirical probability of submarine mass failure is quantified from a sequence of dated mass-transport deposits. Several different techniques are described to estimate the parameters for a suite of candidate probability models. The techniques, previously developed for analyzing paleoseismic data, include maximum likelihood and Type II (Bayesian) maximum likelihood methods derived from renewal process theory and Monte Carlo methods. The estimated mean return time from these methods, unlike estimates from a simple arithmetic mean of the center age dates and standard likelihood methods, includes the effects of age-dating uncertainty and of open time intervals before the first and after the last event. The likelihood techniques are evaluated using Akaike’s Information Criterion (AIC) and Akaike’s Bayesian Information Criterion (ABIC) to select the optimal model. The techniques are applied to mass transport deposits recorded in two Integrated Ocean Drilling Program (IODP) drill sites located in the Ursa Basin, northern Gulf of Mexico. Dates of the deposits were constrained by regional bio- and magnetostratigraphy from a previous study. Results of the analysis indicate that submarine mass failures in this location occur primarily according to a Poisson process in which failures are independent and return times follow an exponential distribution. However, some of the model results suggest that submarine mass failures may occur quasiperiodically at one of the sites (U1324). The suite of techniques described in this study provides quantitative probability estimates of submarine mass failure occurrence, for any number of deposits and age uncertainty distributions.

  17. Zodiacal Exoplanets in Time (ZEIT). III. A Short-period Planet Orbiting a Pre-main-sequence Star in the Upper Scorpius OB Association

    NASA Astrophysics Data System (ADS)

    Mann, Andrew W.; Newton, Elisabeth R.; Rizzuto, Aaron C.; Irwin, Jonathan; Feiden, Gregory A.; Gaidos, Eric; Mace, Gregory N.; Kraus, Adam L.; James, David J.; Ansdell, Megan; Charbonneau, David; Covey, Kevin R.; Ireland, Michael J.; Jaffe, Daniel T.; Johnson, Marshall C.; Kidder, Benjamin; Vanderburg, Andrew

    2016-09-01

    We confirm and characterize a close-in ({P}{{orb}} = 5.425 days), super-Neptune sized ({5.04}-0.37+0.34 {R}\\oplus ) planet transiting K2-33 (2MASS J16101473-1919095), a late-type (M3) pre-main-sequence (11 Myr old) star in the Upper Scorpius subgroup of the Scorpius-Centaurus OB association. The host star has the kinematics of a member of the Upper Scorpius OB association, and its spectrum contains lithium absorption, an unambiguous sign of youth (\\lt 20 Myr) in late-type dwarfs. We combine photometry from K2 and the ground-based MEarth project to refine the planet’s properties and constrain the host star’s density. We determine K2-33’s bolometric flux and effective temperature from moderate-resolution spectra. By utilizing isochrones that include the effects of magnetic fields, we derive a precise radius (6%-7%) and mass (16%) for the host star, and a stellar age consistent with the established value for Upper Scorpius. Follow-up high-resolution imaging and Doppler spectroscopy confirm that the transiting object is not a stellar companion or a background eclipsing binary blended with the target. The shape of the transit, the constancy of the transit depth and periodicity over 1.5 yr, and the independence with wavelength rule out stellar variability or a dust cloud or debris disk partially occulting the star as the source of the signal; we conclude that it must instead be planetary in origin. The existence of K2-33b suggests that close-in planets can form in situ or migrate within ˜10 Myr, e.g., via interactions with a disk, and that long-timescale dynamical migration such as by Lidov-Kozai or planet-planet scattering is not responsible for all short-period planets.

  18. Delayed Gratification Habitable Zones (DG-HZs): When Deep Outer Solar System Regions Become Balmy During Post-Main Sequence Stellar Evolution

    NASA Astrophysics Data System (ADS)

    Stern, S. A.

    2002-09-01

    Late in the Sun's evolution it, like all low and moderate mass stars, it will burn as a red giant, generating 1000s of solar luminosities for a few tens of millions of years. A dozen years ago this stage of stellar evolution was predicted to create observable sublimation signatures in systems where Kuiper Belts (KBs) are extant (Stern et al. 1990, Nature, 345, 305); recently, the SWAS spacecraft detected such systems (Melnick et al. 2001, 412, 160). During the red giant phase, the habitable zone of our solar system will lie in the region where Triton, Pluto-Charon, and KBOs orbit. Compared to the 1 AU habitable zone where Earth resided early in the solar system's history, this "delayed gratification habitable zone (DG-HZ)" will enjoy a far less biologically hazardous environment-- with far lower harmful UV radiation levels from the Sun, and a far quieter collisional environment. Objects like Triton, Pluto-Charon, and KBOs, which are known to be rich in both water and organics, will then become possible sites for biochemical and perhaps even biological evolution. The Sun's DG-HZ may only be of academic interest owing to its great separation from us in time. However, several 108 approximately solar-type Milky Way stars burn as luminous red giants today. Thus, if icy-organic objects are common in the 20-50 AU zones of these stars, as they are in our solar system (and as inferred in numerous main sequence stellar disk systems), then DG-HZs form a kind of niche habitable zone that is likely to be numerically common in the galaxy. I will show the calculated temporal evolution of DG-HZs around various stellar types using modern stellar evolution luminosity tracks, and then discuss various aspects of DG-HZs, including the effects of stellar pulsations and mass loss winds. This work was supported by NASA's Origins of Solar Systems Program.

  19. "Polymeromics": Mass spectrometry based strategies in polymer science toward complete sequencing approaches: a review.

    PubMed

    Altuntaş, Esra; Schubert, Ulrich S

    2014-01-15

    Mass spectrometry (MS) is the most versatile and comprehensive method in "OMICS" sciences (i.e. in proteomics, genomics, metabolomics and lipidomics). The applications of MS and tandem MS (MS/MS or MS(n)) provide sequence information of the full complement of biological samples in order to understand the importance of the sequences on their precise and specific functions. Nowadays, the control of polymer sequences and their accurate characterization is one of the significant challenges of current polymer science. Therefore, a similar approach can be very beneficial for characterizing and understanding the complex structures of synthetic macromolecules. MS-based strategies allow a relatively precise examination of polymeric structures (e.g. their molar mass distributions, monomer units, side chain substituents, end-group functionalities, and copolymer compositions). Moreover, tandem MS offer accurate structural information from intricate macromolecular structures; however, it produces vast amount of data to interpret. In "OMICS" sciences, the software application to interpret the obtained data has developed satisfyingly (e.g. in proteomics), because it is not possible to handle the amount of data acquired via (tandem) MS studies on the biological samples manually. It can be expected that special software tools will improve the interpretation of (tandem) MS output from the investigations of synthetic polymers as well. Eventually, the MS/MS field will also open up for polymer scientists who are not MS-specialists. In this review, we dissect the overall framework of the MS and MS/MS analysis of synthetic polymers into its key components. We discuss the fundamentals of polymer analyses as well as recent advances in the areas of tandem mass spectrometry, software developments, and the overall future perspectives on the way to polymer sequencing, one of the last Holy Grail in polymer science. Copyright © 2013 Elsevier B.V. All rights reserved.

  20. A multi-wavelength study of pre-main sequence stars in the Taurus-Auriga star-forming region

    NASA Astrophysics Data System (ADS)

    Guenther, E. W.; Stelzer, B.; Neuhäuser, R.; Hillwig, T. C.; Durisen, R. H.; Menten, K. M.; Greimel, R.; Barwig, H.; Englhauser, J.; Robb, R. M.

    2000-05-01

    Although many lowmass pre-main sequence stars are strong X-ray sources, the origin of the X-ray emission is not well known. Since these objects are variable at all frequencies, simultaneous observations in X-rays and in other wavelengths are able to constrain the properties of the X-ray emitting regions. In this paper, we report quasi-simultaneous observations in X-rays, the optical, and the radio regime for classical and weak-line T Tauri stars from the Taurus-Auriga star-forming region. We find that all detected T Tauri stars show significant night-to-night variations of the X-ray emission. For three of the stars, FM Tau and CW Tau, both classical T Tauri stars, and V773 Tau, a weak-line T Tauri star, the variations are especially large. From observations taken simultaneously, we also find that there is some correspondence between the strength of Hα and the X-ray brightness in V773 Tau. The lack of a strong correlation leads us to conclude that the X-ray emission of V773 Tau is not a superposition of flares. However, we suggest that a weak correlation occurs because chromospherically active regions and regions of strong X-ray emission are generally related. V773 Tau was detected at 8.46 GHz as a weakly circularly polarised but highly variable source. We also find that the X-ray emission and the equivalent width of Hα remained unchanged, while large variations of the flux density in the radio regime were observed. This clearly indicates that the emitting regions are different. Using optical spectroscopy we detected a flare in Hα and event which showed a flare-like light-curve of the continuum brightness in FM Tau. However, ROSAT did not observe the field at the times of these flares. Nevertheless, an interesting X-ray event was observed in V773 Tau, during which the flux increased for about 8 hours and then decreased back to the same level in 5 hours. We interpret this as a long-duration event similar to those seen on the sun and other active stars. In the

  1. Negative Electron Transfer Dissociation Sequencing of Increasingly Sulfated Glycosaminoglycan Oligosaccharides on an Orbitrap Mass Spectrometer

    NASA Astrophysics Data System (ADS)

    Leach, Franklin E.; Riley, Nicholas M.; Westphall, Michael S.; Coon, Joshua J.; Amster, I. Jonathan

    2017-09-01

    The structural characterization of sulfated glycosaminoglycan (GAG) carbohydrates remains an important target for analytical chemists attributable to challenges introduced by the natural complexity of these mixtures and the defined need for molecular-level details to elucidate biological structure-function relationships. Tandem mass spectrometry has proven to be the most powerful technique for this purpose. Previously, electron detachment dissociation (EDD), in comparison to other methods of ion activation, has been shown to provide the largest number of useful cleavages for de novo sequencing of GAG oligosaccharides, but such experiments are restricted to Fourier transform ion cyclotron resonance mass spectrometers (FTICR-MS). Negative electron transfer dissociation (NETD) provides similar fragmentation results, and can be achieved on any mass spectrometry platform that is designed to accommodate ion-ion reactions. Here, we examine for the first time the effectiveness of NETD-Orbitrap mass spectrometry for the structural analysis of GAG oligosaccharides. Compounds ranging in size from tetrasaccharides to decasaccharides were dissociated by NETD, producing both glycosidic and cross-ring cleavages that enabled the location of sulfate modifications. The highly-sulfated, heparin-like synthetic GAG, ArixtraTM, was also successfully sequenced by NETD. In comparison to other efforts to sequence GAG chains without fully ionized sulfate constituents, the occurrence of sulfate loss peaks is minimized by judicious precursor ion selection. The results compare quite favorably to prior results with electron detachment dissociation (EDD). Significantly, the duty cycle of the NETD experiment is sufficiently short to make it an effective tool for on-line separations, presenting a straightforward path for selective, high-throughput analysis of GAG mixtures. [Figure not available: see fulltext.

  2. Extended Star Formation or a Range of Stellar Rotation Velocities? The Nature of Extended Main Sequence Turnoffs in Intermediate-Age Star Clusters

    NASA Astrophysics Data System (ADS)

    Goudfrooij, Paul

    2016-10-01

    Recently, deep color-magnitude diagrams (CMDs) from HST data revealed that several massive intermediate-age star clusters in the Magellanic Clouds exhibit extended main-sequence turn-offs (eMSTOs), and in some cases also dual red clumps. This poses serious questions regarding the mechanisms responsible for the formation of massive star clusters and their well-known light-element abundance variations. The nature of eMSTOs is currently a hotly debated topic of study. Several recent studies indicate that the eMSTOs are caused by an age spread of about 100-500 Myr among cluster stars, while other studies indicate that eMSTOs can be caused by a coeval population in which the relevant stars span a range of rotation velocities. Formal evidence to (dis-)prove either scenario still remains at large, mainly because the available stellar tracks that incorporate the effects of rotation are only available for masses > 1.7 Msun whereas the stars in the known eMSTOs of intermediate-age clusters are less massive. To circumvent this issue, we identified a massive star cluster in the Large Magellanic Cloud (LMC) that has the right dynamical properties to host an eMSTO along with an age at which the effects of age spreads to CMD morphology are substantially different from those of spreads of rotation rates: the 600 Myr old cluster NGC 1831. We propose to obtain deep WFC3/UVIS imaging with filters F336W and F814W to analyze the morphologies of the MSTO and upper MS regions of NGC 1831 at high precision and compare with model predictions. This will have a lasting impact on our understanding of the eMSTO phenomenon and of star cluster formation in general.

  3. Pulsating low-mass white dwarfs in the frame of new evolutionary sequences. V. Asteroseismology of ELMV white dwarf stars

    NASA Astrophysics Data System (ADS)

    Calcaferro, Leila M.; Córsico, Alejandro H.; Althaus, Leandro G.

    2017-11-01

    Context. Many pulsating low-mass white dwarf stars have been detected in the past years in the field of our Galaxy. Some of them exhibit multiperiodic brightness variation, therefore it is possible to probe their interiors through asteroseismology. Aims: We present a detailed asteroseismological study of all the known low-mass variable white dwarf stars based on a complete set of fully evolutionary models that are representative of low-mass He-core white dwarf stars. Methods: We employed adiabatic radial and nonradial pulsation periods for low-mass white dwarf models with stellar masses ranging from 0.1554 to 0.4352 M⊙ that were derived by simulating the nonconservative evolution of a binary system consisting of an initially 1 M⊙ zero-age main-sequence (ZAMS) star and a 1.4 M⊙ neutron star companion. We estimated the mean period spacing for the stars under study (where this was possible), and then we constrained the stellar mass by comparing the observed period spacing with the average of the computed period spacings for our grid of models. We also employed the individual observed periods of every known pulsating low-mass white dwarf star to search for a representative seismological model. Results: We found that even though the stars under analysis exhibit few periods and the period fits show multiplicity of solutions, it is possible to find seismological models whose mass and effective temperature are in agreement with the values given by spectroscopy for most of the cases. Unfortunately, we were not able to constrain the stellar masses by employing the observed period spacing because, in general, only few periods are exhibited by these stars. In the two cases where we were able to extract the period spacing from the set of observed periods, this method led to stellar mass values that were substantially higher than expected for this type of stars. Conclusions: The results presented in this work show the need for further photometric searches, on the one hand

  4. The Gaia-ESO Survey: the present-day radial metallicity distribution of the Galactic disc probed by pre-main-sequence clusters

    NASA Astrophysics Data System (ADS)

    Spina, L.; Randich, S.; Magrini, L.; Jeffries, R. D.; Friel, E. D.; Sacco, G. G.; Pancino, E.; Bonito, R.; Bravi, L.; Franciosini, E.; Klutsch, A.; Montes, D.; Gilmore, G.; Vallenari, A.; Bensby, T.; Bragaglia, A.; Flaccomio, E.; Koposov, S. E.; Korn, A. J.; Lanzafame, A. C.; Smiljanic, R.; Bayo, A.; Carraro, G.; Casey, A. R.; Costado, M. T.; Damiani, F.; Donati, P.; Frasca, A.; Hourihane, A.; Jofré, P.; Lewis, J.; Lind, K.; Monaco, L.; Morbidelli, L.; Prisinzano, L.; Sousa, S. G.; Worley, C. C.; Zaggia, S.

    2017-05-01

    Context. The radial metallicity distribution in the Galactic thin disc represents a crucial constraint for modelling disc formation and evolution. Open star clusters allow us to derive both the radial metallicity distribution and its evolution over time. Aims: In this paper we perform the first investigation of the present-day radial metallicity distribution based on [Fe/H] determinations in late type members of pre-main-sequence clusters. Because of their youth, these clusters are therefore essential for tracing the current interstellar medium metallicity. Methods: We used the products of the Gaia-ESO Survey analysis of 12 young regions (age < 100 Myr), covering Galactocentric distances from 6.67 to 8.70 kpc. For the first time, we derived the metal content of star forming regions farther than 500 pc from the Sun. Median metallicities were determined through samples of reliable cluster members. For ten clusters the membership analysis is discussed in the present paper, while for other two clusters (I.e. Chamaeleon I and Gamma Velorum) we adopted the members identified in our previous works. Results: All the pre-main-sequence clusters considered in this paper have close-to-solar or slightly sub-solar metallicities. The radial metallicity distribution traced by these clusters is almost flat, with the innermost star forming regions having [Fe/H] values that are 0.10-0.15 dex lower than the majority of the older clusters located at similar Galactocentric radii. Conclusions: This homogeneous study of the present-day radial metallicity distribution in the Galactic thin disc favours models that predict a flattening of the radial gradient over time. On the other hand, the decrease of the average [Fe/H] at young ages is not easily explained by the models. Our results reveal a complex interplay of several processes (e.g. star formation activity, initial mass function, supernova yields, gas flows) that controlled the recent evolution of the Milky Way. Based on observations

  5. Preparation of protein samples for mass spectrometry and N-terminal sequencing.

    PubMed

    Glenn, Gary

    2014-01-01

    The preparation of protein samples for mass spectrometry and N-terminal sequencing is a key step in successfully identifying proteins. Mass spectrometry is a very sensitive technique, and as such, samples must be prepared carefully since they can be subject to contamination of the sample (e.g., due to incomplete subcellular fractionation or purification of a multiprotein complex), overwhelming of the sample by highly abundant proteins, and contamination from skin or hair (keratin can be a very common hit). One goal of sample preparation for mass spec is to reduce the complexity of the sample - in the example presented here, mitochondria are purified, solubilized, and fractionated by sucrose density gradient sedimentation prior to preparative 1D SDS-PAGE. It is important to verify the purity and integrity of the sample so that you can have confidence in the hits obtained. More protein is needed for N-terminal sequencing and ideally it should be purified to a single band when run on an SDS-polyacrylamide gel. The example presented here involves stably expressing a tagged protein in HEK293 cells and then isolating the protein by affinity purification and SDS-PAGE. © 2014 Elsevier Inc. All rights reserved.

  6. Subset of Kappa and Lambda Germline Sequences Result in Light Chains with a Higher Molecular Mass Phenotype.

    PubMed

    Barnidge, David R; Lundström, Susanna L; Zhang, Bo; Dasari, Surendra; Murray, David L; Zubarev, Roman A

    2015-12-04

    In our previous work, we showed that electrospray ionization of intact polyclonal kappa and lambda light chains isolated from normal serum generates two distinct, Gaussian-shaped, molecular mass distributions representing the light-chain repertoire. During the analysis of a large (>100) patient sample set, we noticed a low-intensity molecular mass distribution with a mean of approximately 24 250 Da, roughly 800 Da higher than the mean of the typical kappa molecular-mass distribution mean of 23 450 Da. We also observed distinct clones in this region that did not appear to contain any typical post-translational modifications that would account for such a large mass shift. To determine the origin of the high molecular mass clones, we performed de novo bottom-up mass spectrometry on a purified IgM monoclonal light chain that had a calculated molecular mass of 24 275.03 Da. The entire sequence of the monoclonal light chain was determined using multienzyme digestion and de novo sequence-alignment software and was found to belong to the germline allele IGKV2-30. The alignment of kappa germline sequences revealed ten IGKV2 and one IGKV4 sequences that contained additional amino acids in their CDR1 region, creating the high-molecular-mass phenotype. We also performed an alignment of lambda germline sequences, which showed additional amino acids in the CDR2 region, and the FR3 region of functional germline sequences that result in a high-molecular-mass phenotype. The work presented here illustrates the ability of mass spectrometry to provide information on the diversity of light-chain molecular mass phenotypes in circulation, which reflects the germline sequences selected by the immunoglobulin-secreting B-cell population.

  7. Observation and modelling of main-sequence star chromospheres - XII. Two-component model chromospheres for five active dM1e stars

    NASA Astrophysics Data System (ADS)

    Houdebine, E. R.

    2009-08-01

    We aim to constrain the Hα, CaII H and CaII K profiles from quiescent and active regions on active dM1e stars. A preliminary analysis of all the data available for dM1e stars shows that the Hα/CaII equivalent width (EW) ratio varies by up to a factor of 7 for different stars in our sample. We find that spectroscopic binaries have a significantly smaller ratio than single dM1e stars. We also find that the pre-main-sequence stars Gl 616.2, GJ 1264 and Gl 803 have a ratio lower than main-sequence single dM1e stars. These differences imply that different chromospheric structures are present on different stars, notably the temperature minimum must decrease with an increasing Hα/CaII EW ratio. For these reasons, it is impossible to reproduce all observations with only one grid of model chromospheres. We show that the grid of model chromospheres of Paper VI is adequate to describe the physical conditions that prevail in the chromospheres of spectroscopic binaries and pre-main-sequence M1e stars, but not for the conditions in single dM1e stars. One or more additional grids of model chromospheres will be necessary to reproduce all observations. We use the method developed in Paper XI in this series, in order to build two-component model chromospheres for five M1e field stars: FF And A, FF And B, GJ 1264, AU Mic and Gl 815A. Our solutions provide an exact match of the Hα and the mean CaII H & K EWs within measurement uncertainties. We compare the theoretical profiles and the observed profiles of Hα and the CaII H & K resonance lines. On the one hand, our fits to the CaII lines are reasonably good. On the other hand, our models tend to produce Hα profiles with a central absorption that is too deep. This suggests that the column mass at the transition region for plages is underestimated, but this would imply that the contrast factor between quiescent and active regions in the CaII lines is larger than 5. We find that, except in the cases of FF And A and AU Mic, the total

  8. Concurrent Automated Sequencing of the Glycan and Peptide Portions of O-Linked Glycopeptide Anions by Ultraviolet Photodissociation Mass Spectrometry

    PubMed Central

    Madsen, James A.; Ko, Byoung Joon; Xu, Hua; Iwashkiw, Jeremy A.; Robotham, Scott A.; Shaw, Jared B.; Feldman, Mario F.; Brodbelt, Jennifer S.

    2013-01-01

    O -glycopeptides are often acidic owing to the frequent occurrence of acidic saccharides in the glycan, rendering traditional proteomic workflows that rely on positive mode tandem mass spectrometry (MS/MS) less effective. In this report, we demonstrate the utility of negative mode ultraviolet photodissociation (UVPD) MS for the characterization of acidic O-linked glycopeptide anions. This method was evaluated for a series of singly- and multiply-deprotonated glycopeptides from the model glycoprotein kappa casein, resulting in production of both peptide and glycan product ions that afforded 100% sequence coverage of the peptide and glycan moieties from a single MS/MS event. The most abundant and frequent peptide sequence ions were a/x-type products, which, importantly, were found to retain the labile glycan modifications. The glycan-specific ions mainly arose from glycosidic bond cleavages (B, Y, C, and Z ions) in addition to some less common cross-ring cleavages. Based on the UVPD fragmentation patterns, an automated database searching strategy (based on the MassMatrix algorithm) was designed that is specific for the analysis of glycopeptide anions by UVPD. This algorithm was used to identify glycopeptides from mixtures of glycosylated and non-glycosylated peptides, sequence both glycan and peptide moieties simultaneously, and pinpoint the correct site(s) of glycosylation. This methodology was applied to uncover novel site-specificity of the O-linked glycosylated OmpA/MotB from the “superbug” A. baumannii to help aid in the elucidation of the functional role that protein glycosylation plays in pathogenesis. PMID:24006841

  9. Emissions of NOx, particle mass and particle numbers from aircraft main engines, APU's and handling equipment at Copenhagen Airport

    NASA Astrophysics Data System (ADS)

    Winther, Morten; Kousgaard, Uffe; Ellermann, Thomas; Massling, Andreas; Nøjgaard, Jacob Klenø; Ketzel, Matthias

    2015-01-01

    This paper presents a detailed emission inventory for NOx, particle mass (PM) and particle numbers (PN) for aircraft main engines, APU's and handling equipment at Copenhagen Airport (CPH) based on time specific activity data and representative emission factors for the airport. The inventory has a high spatial resolution of 5 m × 5 m in order to be suited for further air quality dispersion calculations. Results are shown for the entire airport and for a section of the airport apron area ("inner apron") in focus. The methodology presented in this paper can be used to quantify the emissions from aircraft main engines, APU and handling equipment in other airports. For the entire airport, aircraft main engines is the largest source of fuel consumption (93%), NOx, (87%), PM (61%) and PN (95%). The calculated fuel consumption [NOx, PM, PN] shares for APU's and handling equipment are 5% [4%, 8%, 5%] and 2% [9%, 31%, 0%], respectively. At the inner apron area for handling equipment the share of fuel consumption [NOx, PM, PN] are 24% [63%, 75%, 2%], whereas APU and main engines shares are 43% [25%, 19%, 54%], and 33% [11%, 6%, 43%], respectively. The inner apron NOx and PM emission levels are high for handling equipment due to high emission factors for the diesel fuelled handling equipment and small for aircraft main engines due to small idle-power emission factors. Handling equipment is however a small PN source due to the low number based emission factors. Jet fuel sulphur-PM sensitivity calculations made in this study with the ICAO FOA3.0 method suggest that more than half of the PM emissions from aircraft main engines at CPH originate from the sulphur content of the fuel used at the airport. Aircraft main engine PN emissions are very sensitive to the underlying assumptions. Replacing this study's literature based average emission factors with "high" and "low" emission factors from the literature, the aircraft main engine PN emissions were estimated to change with a

  10. Modeling of water masses exchange between Brepolen and the main fjord in the Western Svalbard fjord - Hornsund

    NASA Astrophysics Data System (ADS)

    Jakacki, Jaromir; Przyborska, Anna; Sunfjord, Arild; Albertsen, Jon; Białoskórski, Michał; Pliszka, Bartosz

    2016-04-01

    Hornsund is the southernmost fjord of the Svalbard archipelago island - Spitsbergen. It is under the influence of two main currents - the coastal Sørkapp Current (SC) carrying fresher and colder water masses from the Barents Sea and the West Spitsbergen Current (WSC), which is the branch of the Norwegian Atlantic Current (NwAC) and carries warm and salty waters from the North Atlantic. The main local forcing, which is tidal motion, brings shelf waters into the central fjord basin and then the transformed masses are carried into the easternmost part of the fjord, Brepolen. For the purpose of studying circulation and water exchange in this area a three-dimensional hydrodynamic model has been implemented and validated. The model is based on MIKE by DHI product and covers the Hornsund fjord with the shelf area, which is the fjord foreground. It is sigma a coordinate model (in our case 35 vertical levels) with variable horizontal resolution (mesh grid). The smallest cell has a horizontal dimension less than one hundred meters and the largest cells about 5 km. In spite of model limitations, the model reproduces the main circulation and water pathways in the Brepolen area. Seasonal and annual volume, heat and salt exchanges have been also estimated. The influence of freshwater discharge on shelf-fjord exchange will be also analyzed. The model results allow to study full horizontal and vertical fields of physical parameters (temperature, salinity, sea level variations and currents). The model integration covers only years 2005-2010 and the presented results will be based on this simulation. The project has been financed from the funds of the Leading National Research Centre (KNOW) received by the Centre for Polar Studies for the period 2014-2018

  11. DeNovoGUI: an open source graphical user interface for de novo sequencing of tandem mass spectra.

    PubMed

    Muth, Thilo; Weilnböck, Lisa; Rapp, Erdmann; Huber, Christian G; Martens, Lennart; Vaudel, Marc; Barsnes, Harald

    2014-02-07

    De novo sequencing is a popular technique in proteomics for identifying peptides from tandem mass spectra without having to rely on a protein sequence database. Despite the strong potential of de novo sequencing algorithms, their adoption threshold remains quite high. We here present a user-friendly and lightweight graphical user interface called DeNovoGUI for running parallelized versions of the freely available de novo sequencing software PepNovo+, greatly simplifying the use of de novo sequencing in proteomics. Our platform-independent software is freely available under the permissible Apache2 open source license. Source code, binaries, and additional documentation are available at http://denovogui.googlecode.com .

  12. ScanRanker: Quality Assessment of Tandem Mass Spectra via Sequence Tagging

    PubMed Central

    Ma, Ze-Qiang; Chambers, Matthew C.; Ham, Amy-Joan L.; Cheek, Kristin L.; Whitwell, Corbin W.; Aerni, Hans-Rudolf; Schilling, Birgit; Miller, Aaron W.; Caprioli, Richard M.; Tabb, David L.

    2011-01-01

    In shotgun proteomics, protein identification by tandem mass spectrometry relies on bioinformatics tools. Despite recent improvements in identification algorithms, a significant number of high quality spectra remain unidentified for various reasons. Here we present ScanRanker, an open-source tool that evaluates the quality of tandem mass spectra via sequence tagging with reliable performance in data from different instruments. The superior performance of ScanRanker enables it not only to find unassigned high quality spectra that evade identification through database search, but also to select spectra for de novo sequencing and cross-linking analysis. In addition, we demonstrate that the distribution of ScanRanker scores predicts the richness of identifiable spectra among multiple LC-MS/MS runs in an experiment, and ScanRanker scores assist the process of peptide assignment validation to increase confident spectrum identifications. The source code and executable versions of ScanRanker are available from http://fenchurch.mc.vanderbilt.edu. PMID:21520941

  13. A HIGHER EFFICIENCY OF CONVERTING GAS TO STARS PUSHES GALAXIES AT z ∼ 1.6 WELL ABOVE THE STAR-FORMING MAIN SEQUENCE

    SciTech Connect

    Silverman, J. D.; Rujopakarn, W.; Daddi, E.

    2015-10-20

    Local starbursts have a higher efficiency of converting gas into stars, as compared to typical star-forming galaxies at a given stellar mass, possibly indicative of different modes of star formation. With the peak epoch of galaxy formation occurring at z > 1, it remains to be established whether such an efficient mode of star formation is occurring at high redshift. To address this issue, we measure the molecular gas content of seven high-redshift (z ∼ 1.6) starburst galaxies with the Atacama Large Millimeter/submillimeter Array and IRAM/Plateau de Bure Interferometer. Our targets are selected from the sample of Herschel far-infrared-detected galaxiesmore » having star formation rates (∼300–800 M{sub ⊙} yr{sup −1}) elevated (≳4×) above the star-forming main sequence (MS) and included in the FMOS-COSMOS near-infrared spectroscopic survey of star-forming galaxies at z ∼ 1.6 with Subaru. We detect CO emission in all cases at high levels of significance, indicative of high gas fractions (∼30%–50%). Even more compelling, we firmly establish with a clean and systematic selection that starbursts, identified as MS outliers, at high redshift generally have a lower ratio of CO to total infrared luminosity as compared to typical MS star-forming galaxies, although with a smaller offset than expected based on past studies of local starbursts. We put forward a hypothesis that there exists a continuous increase in star formation efficiency with elevation from the MS with galaxy mergers as a possible physical driver. Along with a heightened star formation efficiency, our high-redshift sample is similar in other respects to local starbursts, such as being metal rich and having a higher ionization state of the interstellar medium.« less

  14. A Higher Efficiency of Converting Gas to Stars Pushes Galaxies at z ˜ 1.6 Well Above the Star-forming Main Sequence

    NASA Astrophysics Data System (ADS)

    Silverman, J. D.; Daddi, E.; Rodighiero, G.; Rujopakarn, W.; Sargent, M.; Renzini, A.; Liu, D.; Feruglio, C.; Kashino, D.; Sanders, D.; Kartaltepe, J.; Nagao, T.; Arimoto, N.; Berta, S.; Béthermin, M.; Koekemoer, A.; Lutz, D.; Magdis, G.; Mancini, C.; Onodera, M.; Zamorani, G.

    2015-10-01

    Local starbursts have a higher efficiency of converting gas into stars, as compared to typical star-forming galaxies at a given stellar mass, possibly indicative of different modes of star formation. With the peak epoch of galaxy formation occurring at z > 1, it remains to be established whether such an efficient mode of star formation is occurring at high redshift. To address this issue, we measure the molecular gas content of seven high-redshift (z ˜ 1.6) starburst galaxies with the Atacama Large Millimeter/submillimeter Array and IRAM/Plateau de Bure Interferometer. Our targets are selected from the sample of Herschel far-infrared-detected galaxies having star formation rates (˜300-800 M⊙ yr-1) elevated (≳4×) above the star-forming main sequence (MS) and included in the FMOS-COSMOS near-infrared spectroscopic survey of star-forming galaxies at z ˜ 1.6 with Subaru. We detect CO emission in all cases at high levels of significance, indicative of high gas fractions (˜30%-50%). Even more compelling, we firmly establish with a clean and systematic selection that starbursts, identified as MS outliers, at high redshift generally have a lower ratio of CO to total infrared luminosity as compared to typical MS star-forming galaxies, although with a smaller offset than expected based on past studies of local starbursts. We put forward a hypothesis that there exists a continuous increase in star formation efficiency with elevation from the MS with galaxy mergers as a possible physical driver. Along with a heightened star formation efficiency, our high-redshift sample is similar in other respects to local starbursts, such as being metal rich and having a higher ionization state of the interstellar medium.

  15. Sources and mass fluxes of the main contaminants in a heavily polluted and modified river of the North China Plain.

    PubMed

    Li, Wenzan; Li, Xuyong; Su, Jingjun; Zhao, Hongtao

    2014-04-01

    Many rivers in China and other newly industrialized countries have suffered from severe degradation of water quality in the context of rapid economic growth. An accounting method was developed to investigate the source and mass fluxes of the main contaminants in the Ziya River, a severely polluted and heavily modified river in a semiarid area of the North China Plain, where chemical oxygen demand (COD) and ammonia nitrogen (NH4-N) were the most important indicators of pollution. The results showed that the urban sewage with high concentration of COD and NH4-N dominated the streams, contributing to 80.7 % of the streamflow, 92.2 % of COD, and 94.5 % of NH4-N. The concentrations of COD and NH4-N in streams varied from 24.0-195.0 to 5.8-43.8 mg/L, respectively. Mass fluxes of COD and NH4-N of all pathways were quantified. Much of the polluted water was diverted to irrigation, and some eventually flowed into the Bohai Sea. Installation of adequate wastewater treatment facilities and making strict discharge standards can help improve the water quality. Our findings imply that a simple accounting method provides an extremely well-documented example for load estimation and can be useful for intervention strategies in heavily polluted and modified rivers in newly industrialized countries.

  16. Application of Tandem Two-Dimensional Mass Spectrometry for Top-Down Deep Sequencing of Calmodulin.

    PubMed

    Floris, Federico; Chiron, Lionel; Lynch, Alice M; Barrow, Mark P; Delsuc, Marc-André; O'Connor, Peter B

    2018-06-04

    Two-dimensional mass spectrometry (2DMS) involves simultaneous acquisition of the fragmentation patterns of all the analytes in a mixture by correlating their precursor and fragment ions by modulating precursor ions systematically through a fragmentation zone. Tandem two-dimensional mass spectrometry (MS/2DMS) unites the ultra-high accuracy of Fourier transform ion cyclotron resonance (FT-ICR) MS/MS and the simultaneous data-independent fragmentation of 2DMS to achieve extensive inter-residue fragmentation of entire proteins. 2DMS was recently developed for top-down proteomics (TDP), and applied to the analysis of calmodulin (CaM), reporting a cleavage coverage of about ~23% using infrared multiphoton dissociation (IRMPD) as fragmentation technique. The goal of this work is to expand the utility of top-down protein analysis using MS/2DMS in order to extend the cleavage coverage in top-down proteomics further into the interior regions of the protein. In this case, using MS/2DMS, the cleavage coverage of CaM increased from ~23% to ~42%. Graphical Abstract Two-dimensional mass spectrometry, when applied to primary fragment ions from the source, allows deep-sequencing of the protein calmodulin.

  17. Explaining the luminosity spread in young clusters: proto and pre-main sequence stellar evolution in a molecular cloud environment

    NASA Astrophysics Data System (ADS)

    Jensen, Sigurd S.; Haugbølle, Troels

    2018-02-01

    Hertzsprung-Russell diagrams of star-forming regions show a large luminosity spread. This is incompatible with well-defined isochrones based on classic non-accreting protostellar evolution models. Protostars do not evolve in isolation of their environment, but grow through accretion of gas. In addition, while an age can be defined for a star-forming region, the ages of individual stars in the region will vary. We show how the combined effect of a protostellar age spread, a consequence of sustained star formation in the molecular cloud, and time-varying protostellar accretion for individual protostars can explain the observed luminosity spread. We use a global magnetohydrodynamic simulation including a sub-scale sink particle model of a star-forming region to follow the accretion process of each star. The accretion profiles are used to compute stellar evolution models for each star, incorporating a model of how the accretion energy is distributed to the disc, radiated away at the accretion shock, or incorporated into the outer layers of the protostar. Using a modelled cluster age of 5 Myr, we naturally reproduce the luminosity spread and find good agreement with observations of the Collinder 69 cluster, and the Orion Nebular Cluster. It is shown how stars in binary and multiple systems can be externally forced creating recurrent episodic accretion events. We find that in a realistic global molecular cloud model massive stars build up mass over relatively long time-scales. This leads to an important conceptual change compared to the classic picture of non-accreting stellar evolution segmented into low-mass Hayashi tracks and high-mass Henyey tracks.

  18. A search for pre-main-sequence stars in high-latitude molecular clouds. 3: A survey of the Einstein database

    NASA Technical Reports Server (NTRS)

    Caillault, Jean-Pierre; Magnani, Loris; Fryer, Chris

    1995-01-01

    In order to discern whether the high-latitude molecular clouds are regions of ongoing star formation, we have used X-ray emission as a tracer of youthful stars. The entire Einstein database yields 18 images which overlap 10 of the clouds mapped partially or completely in the CO (1-0) transition, providing a total of approximately 6 deg squared of overlap. Five previously unidentified X-ray sources were detected: one has an optical counterpart which is a pre-main-sequence (PMS) star, and two have normal main-sequence stellar counterparts, while the other two are probably extragalactic sources. The PMS star is located in a high Galactic latitude Lynds dark cloud, so this result is not too suprising. The translucent clouds, though, have yet to reveal any evidence of star formation.

  19. High-performance liquid chromatography-mass spectrometry for mapping and sequencing glycosaminoglycan-derived oligosaccharides

    PubMed Central

    Volpi, Nicola; Linhardt, Robert J

    2012-01-01

    Glycosaminoglycans (GAGs) have proven to be very difficult to analyze and characterize because of their high negative charge density, polydispersity and sequence heterogeneity. As the specificity of the interactions between GAGs and proteins results from the structure of these polysaccharides, an understanding of GAG structure is essential for developing a structure–activity relationship. Electrospray ionization (ESI) mass spectrometry (MS) is particularly promising for the analysis of oligosaccharides chemically or enzymatically generated by GAGs because of its relatively soft ionization capacity. Furthermore, on-line high-performance liquid chromatography (HPLC)-MS greatly enhances the characterization of complex mixtures of GAG-derived oligosaccharides, providing important structural information and affording their disaccharide composition. A detailed protocol for producing oligosaccharides from various GAGs, using controlled, specific enzymatic or chemical depolymerization, is presented, together with their HPLC separation, using volatile reversed-phase ion-pairing reagents and on-line ESI-MS structural identification. This analysis provides an oligosaccharide map together with sequence information from a reading frame beginning at the nonreducing end of the GAG chains. The preparation of oligosaccharides can be carried out in 10 h, with subsequent HPLC analysis in 1–2 h and HPLC-MS analysis taking another 2 h. PMID:20448545

  20. Stellar Diameters and Temperatures. III. Main-sequence A, F, G, and K Stars: Additional High-precision Measurements and Empirical Relations

    NASA Astrophysics Data System (ADS)

    Boyajian, Tabetha S.; von Braun, Kaspar; van Belle, Gerard; Farrington, Chris; Schaefer, Gail; Jones, Jeremy; White, Russel; McAlister, Harold A.; ten Brummelaar, Theo A.; Ridgway, Stephen; Gies, Douglas; Sturmann, Laszlo; Sturmann, Judit; Turner, Nils H.; Goldfinger, P. J.; Vargas, Norm

    2013-07-01

    Based on CHARA Array measurements, we present the angular diameters of 23 nearby, main-sequence stars, ranging from spectral types A7 to K0, 5 of which are exoplanet host stars. We derive linear radii, effective temperatures, and absolute luminosities of the stars using Hipparcos parallaxes and measured bolometric fluxes. The new data are combined with previously published values to create an Angular Diameter Anthology of measured angular diameters to main-sequence stars (luminosity classes V and IV). This compilation consists of 125 stars with diameter uncertainties of less than 5%, ranging in spectral types from A to M. The large quantity of empirical data is used to derive color-temperature relations to an assortment of color indices in the Johnson (BVR J I J JHK), Cousins (R C I C), Kron (R K I K), Sloan (griz), and WISE (W 3 W 4) photometric systems. These relations have an average standard deviation of ~3% and are valid for stars with spectral types A0-M4. To derive even more accurate relations for Sun-like stars, we also determined these temperature relations omitting early-type stars (T eff > 6750 K) that may have biased luminosity estimates because of rapid rotation; for this subset the dispersion is only ~2.5%. We find effective temperatures in agreement within a couple of percent for the interferometrically characterized sample of main-sequence stars compared to those derived via the infrared flux method and spectroscopic analysis.

  1. The Pietra Grande thrust (Brenta Dolomites, Italy): looking for co-seismic indicators along a main fault in carbonate sequences

    NASA Astrophysics Data System (ADS)

    Viganò, Alfio; Tumiati, Simone; Martin, Silvana; Rigo, Manuel

    2013-04-01

    At present, pseudotachylytes (i.e. solidified frictional melts) are the only unambiguous geological record of seismic faulting. Even if pseudotachylytes are frequently observed along faults within crystalline rocks they are discovered along carbonate faults in very few cases only, suggesting that other chemico-physical processes than melting could occur (e.g. thermal decomposition). In order to investigate possible co-seismic indicators we study the Pietra Grande thrust, a carbonate fault in the Brenta Dolomites (Trentino, NE Italy), to analyse field structure, microtextures and composition of rocks from the principal slip plane, the fault core and the damage zone. The Pietra Grande thrust is developed within limestones and dolomitic limestones of Late Triassic-Early Jurassic age (Calcari di Zu and Monte Zugna Formations). The thrust, interpreted as a north-vergent décollement deeply connected with the major Cima Tosa thrust, is a sub-horizontal fault plane gently dipping to the North that mainly separates the massive Monte Zugna Fm. limestones (upper side) from the stratified Calcari di Zu Fm. limestones with intercalated marls (lower side). On the western face of the Pietra Grande klippe the thrust is continuously well-exposed for about 1 km. The main fault plane shows reddish infillings, which form veins with thicknesses between few millimetres to several decimetres. These red veins lie parallel to the thrust plane or in same cases inject lateral fractures and minor high-angle faults departing from the main fault plane. Veins have carbonate composition and show textures characterized by fine-grained reddish matrix with embedded carbonate clasts of different size (from few millimetres to centimetres). In some portions carbonate boulders (dimension of some decimetres) are embedded in the red matrix, while clast content generally significantly decreases at the vein borders (chilled margins). Red veins are typically associated with cohesive cataclasites and

  2. An effective temperature calibration for main-sequence B- to F-type stars using VJHK_{s} colors

    NASA Astrophysics Data System (ADS)

    Paunzen, Ernst; Netopil, Martin; Herdin, Andreas

    2017-01-01

    The effective temperature is an important parameter that is needed for numerous astrophysical studies, in particular to place stars in the Hertzsprung-Russell diagram, for example. Although the availability of large spectroscopic surveys increased significantly in the last decade, photometric data are still much more frequent. Homogeneous photometric (all-sky) surveys provide the basis to derive the effective temperature with reasonable accuracy also for objects that are not covered by spectroscopic surveys, or are out of range for the current spectroscopic instrumentations because of too faint magnitudes. We use data of the Two Micron All Sky Survey (2MASS) and broadband visual photometric measurements to derive effective temperature calibrations for the intrinsic colors (V-J), (V-H), (V-K_{s}), and (J-K_{s}), valid for B2 to F9 stars. The effective temperature calibrations are tied to the Strömgren-Crawford uvbyβ photometric system and do not depend on metallicity or rotational velocity.

  3. Accretion and outflow activity on the late phases of pre-main-sequence evolution. The case of RZ Piscium

    NASA Astrophysics Data System (ADS)

    Potravnov, I. S.; Mkrtichian, D. E.; Grinin, V. P.; Ilyin, I. V.; Shakhovskoy, D. N.

    2017-03-01

    RZ Psc is an isolated high-latitude post-T Tauri star that demonstrates a UX Ori-type photometric activity. The star shows very weak spectroscopic signatures of accretion, but at the same time possesses the unusual footprints of the wind in Na I D lines. In the present work we investigate new spectroscopic observations of RZ Psc obtained in 2014 during two observation runs. We found variable blueshifted absorption components (BACs) in lines of the other alcali metals, K I 7699 Å and Ca II IR triplet. We also confirmed the presence of a weak emission component in the Hα line, which allowed us to estimate the mass accretion rate on the star as Ṁ ≤ 7 × 10-12M⊙ yr-1. We could not reveal any clear periodicity in the appearance of BACs in sodium lines. Nevertheless, the exact coincidence of the structure and velocities of the Na I D absorptions observed with the interval of about one year suggests that such a periodicity should exist.

  4. Variable extinction in HD 45677 and the evolution of dust grains in pre-main-sequence disks

    NASA Technical Reports Server (NTRS)

    Sitko, Michael L.; Halbedel, Elaine M.; Lawrence, Geoffrey F.; Smith, J. Allyn; Yanow, Ken

    1994-01-01

    Changes in the UV extinction and IR emission were sought in the Herbig Ae/Be star candidate HD 45677 (= FS CMa) by comparing UV, optical, and IR observations made approximately 10 yr apart. HD 45677 varied significantly, becoming more than 50% brighter in the UV and optical than it was a decade ago. A comparison of the observations between epochs indicates that if the variations are due to changes in dust obscuration, the dust acts as a gray absorber into the near-IR and must be depleted in grains smaller than 1 micron. This is similar to the results obtained on the circumstellar disks of stars like Vega and Beta Pic, and suggests that radiation pressure may be responsible for the small-grain depletion. In addition, the total IR flux seems to have declined, indicating a decrease in the total mass of the dust envelope that contributes to the IR emission in this part of the spectrum. Due to the anomalous nature of the extinction, the use of normal extinction curves to deredden the spectral energy distributions of stars with circumstellar dust may lead to significant errors and should be used with great caution.

  5. XMM-NEWTON MONITORING OF THE CLOSE PRE-MAIN-SEQUENCE BINARY AK SCO. EVIDENCE OF TIDE-DRIVEN FILLING OF THE INNER GAP IN THE CIRCUMBINARY DISK

    SciTech Connect

    Gomez de Castro, Ana Ines; Lopez-Santiago, Javier; Talavera, Antonio

    2013-03-20

    AK Sco stands out among pre-main-sequence binaries because of its prominent ultraviolet excess, the high eccentricity of its orbit, and the strong tides driven by it. AK Sco consists of two F5-type stars that get as close as 11 R{sub *} at periastron passage. The presence of a dense (n{sub e} {approx} 10{sup 11} cm{sup -3}) extended envelope has been unveiled recently. In this article, we report the results from an XMM-Newton-based monitoring of the system. We show that at periastron, X-ray and UV fluxes are enhanced by a factor of {approx}3 with respect to the apastron values. The X-raymore » radiation is produced in an optically thin plasma with T {approx} 6.4 Multiplication-Sign 10{sup 6} K and it is found that the N{sub H} column density rises from 0.35 Multiplication-Sign 10{sup 21} cm{sup -2} at periastron to 1.11 Multiplication-Sign 10{sup 21} cm{sup -2} at apastron, in good agreement with previous polarimetric observations. The UV emission detected in the Optical Monitor band seems to be caused by the reprocessing of the high-energy magnetospheric radiation on the circumstellar material. Further evidence of the strong magnetospheric disturbances is provided by the detection of line broadening of 278.7 km s{sup -1} in the N V line with Hubble Space Telescope/Space Telescope Imaging Spectrograph. Numerical simulations of the mass flow from the circumbinary disk to the components have been carried out. They provide a consistent scenario with which to interpret AK Sco observations. We show that the eccentric orbit acts like a gravitational piston. At apastron, matter is dragged efficiently from the inner disk border, filling the inner gap and producing accretion streams that end as ring-like structures around each component of the system. At periastron, the ring-like structures come into contact, leading to angular momentum loss, and thus producing an accretion outburst.« less

  6. Carbon, nitrogen and oxygen abundances in atmospheres of the 5-11 M⊙ B-type main-sequence stars

    NASA Astrophysics Data System (ADS)

    Lyubimkov, Leonid S.; Lambert, David L.; Poklad, Dmitry B.; Rachkovskaya, Tamara M.; Rostopchin, Sergey I.

    2013-02-01

    Fundamental parameters and the carbon, nitrogen and oxygen abundances are determined for 22 B-type stars with distances d ≤ 600 pc and slow rotation (v sin i ≤ 66 km s-1). The stars are selected according to their effective temperatures Teff and surface gravities log g, namely: Teff is between 15 300 and 24 100 K and log g is mostly greater than 3.75; therefore, stars with medium masses of 5-11 M⊙ are selected. Theory predicts for the stars with such parameters that the C, N and O abundances in their atmospheres should correspond to their initial values. Non-local thermodynamic equilibrium (non-LTE) analysis of C ii, N ii and O ii lines is implemented. The following mean C, N and O abundances are obtained: log ɛ(C) = 8.31 ± 0.13, log ɛ(N) = 7.80 ± 0.12 and log ɛ(O) = 8.73 ± 0.13. These values are in very good agreement with recent data on the C, N and O abundances for nearby B stars from other authors; it is important that different techniques are applied by us and other authors. When excluding for the stars HR 1810 and HR 2938, which can be mixed, we obtain the following mean abundances for the remaining 20 stars: log ɛ(C) = 8.33 ± 0.11, log ɛ(N) = 7.78 ± 0.09 and log ɛ(O) = 8.72 ± 0.12; these values are in excellent agreement with a present-day cosmic abundance standard (CAS) of Nieva & Przybilla. The derived mean N and O abundances in unevolved B stars are very close to the solar photospheric abundances, as well as to the protosolar ones. However, the mean C abundance is somewhat lower than the solar one; this small but stable carbon deficiency is confirmed by other authors. One may suggest two possibilities to explain the observed C deficiency. First, current non-LTE computations of C ii lines are still partially inadequate. In this case the C deficiency is invalid, so one may conclude that the Sun and the local unevolved B stars have the same metallicity. This would mean that during the Sun's life (i.e. for the past 4.5 × 109 yr) the

  7. Alteration of the microsaccadic velocity-amplitude main sequence relationship after visual transients: implications for models of saccade control

    PubMed Central

    Chen, Chih-Yang; Tian, Xiaoguang; Idrees, Saad; Münch, Thomas A.

    2017-01-01

    Microsaccades occur during gaze fixation to correct for miniscule foveal motor errors. The mechanisms governing such fine oculomotor control are still not fully understood. In this study, we explored microsaccade control by analyzing the impacts of transient visual stimuli on these movements’ kinematics. We found that such kinematics can be altered in systematic ways depending on the timing and spatial geometry of visual transients relative to the movement goals. In two male rhesus macaques, we presented peripheral or foveal visual transients during an otherwise stable period of fixation. Such transients resulted in well-known reductions in microsaccade frequency, and our goal was to investigate whether microsaccade kinematics would additionally be altered. We found that both microsaccade timing and amplitude were modulated by the visual transients, and in predictable manners by these transients’ timing and geometry. Interestingly, modulations in the peak velocity of the same movements were not proportional to the observed amplitude modulations, suggesting a violation of the well-known “main sequence” relationship between microsaccade amplitude and peak velocity. We hypothesize that visual stimulation during movement preparation affects not only the saccadic “Go” system driving eye movements but also a “Pause” system inhibiting them. If the Pause system happens to be already turned off despite the new visual input, movement kinematics can be altered by the readout of additional visually evoked spikes in the Go system coding for the flash location. Our results demonstrate precise control over individual microscopic saccades and provide testable hypotheses for mechanisms of saccade control in general. NEW & NOTEWORTHY Microsaccadic eye movements play an important role in several aspects of visual perception and cognition. However, the mechanisms for microsaccade control are still not fully understood. We found that microsaccade kinematics can be

  8. Observation and modelling of main-sequence star chromospheres - XIV. Rotation of dM1 stars

    NASA Astrophysics Data System (ADS)

    Houdebine, E. R.

    2010-09-01

    We have measured v sin i for a selected sample of dM1-type stars. We give 114 measurements of v sin i for 88 different stars, and six upper detection limits. These are the first measurements of v sin i for most of the stars studied here. This represents the largest sample of v sin i measurements for M dwarfs at a given spectral type. For these measurements, we used four different spectrographs: HARPS (ESO), SOPHIE (OHP), ÉLODIE (OHP) and UVES (ESO). Two of these spectrographs (HARPS and SOPHIE) are particularly stable in wavelength since they were designed for exoplanet searches. We measured v sin i down to an accuracy of 0.3kms-1 for the highest resolution spectrographs and a detection limit of about 1kms-1. We show that this unprecedented accuracy for M dwarfs in our data set is possible because all the targets have the same spectral type. This is an advantage and it facilitates the determination of the narrowest line profiles for v sin i ~ 0. Although it is possible to derive the zero-point profiles using several spectral types at a time. These values were combined with other measurements taken from the literature. The total sample represents detected rotation for 100 stars (10 dM1e and 90 dM1 stars). We confirm our finding of Paper VII that the distribution of the projected rotation period is bimodal for dM1 stars with a much larger sample, i.e. there are two groups of stars: the fast rotators with P/sin i ~ 4.5d and the slow rotators with P/sin i ~ 14.4d. There is a gap between these two groups. We find that the distribution of stars as a function of P/sin i has two very abrupt cuts, below 10d and above 18d. There are very few stars observed out of this range 10-18d. We also observe that the distribution increases slightly from 18 to 10d. We find that the M1 subdwarfs (very low metallicity dwarfs) rotate with an average period of P/sin i ~ 7.2d, which is about twice faster as the main group of normal M1 dwarfs. We also find a correlation for P/sin i to

  9. The Intrinsic Characteristics of Galaxies on the SFR–M ∗ Plane at 1.2 < z < 4: I. The Correlation between Stellar Age, Central Density, and Position Relative to the Main Sequence

    NASA Astrophysics Data System (ADS)

    Lee, Bomee; Giavalisco, Mauro; Whitaker, Katherine; Williams, Christina C.; Ferguson, Henry C.; Acquaviva, Viviana; Koekemoer, Anton M.; Straughn, Amber N.; Guo, Yicheng; Kartaltepe, Jeyhan S.; Lotz, Jennifer; Pacifici, Camilla; Croton, Darren J.; Somerville, Rachel S.; Lu, Yu

    2018-02-01

    We use the deep CANDELS observations in the GOODS North and South fields to revisit the correlations between stellar mass (M *), star formation rate (SFR) and morphology, and to introduce a fourth dimension, the mass-weighted stellar age, in galaxies at 1.2< z< 4. We do this by making new measures of M *, SFR, and stellar age thanks to an improved SED fitting procedure that allows various star formation history for each galaxy. Like others, we find that the slope of the main sequence (MS) of star formation in the ({M}* ;{SFR}) plane bends at high mass. We observe clear morphological differences among galaxies across the MS, which also correlate with stellar age. At all redshifts, galaxies that are quenching or quenched, and thus old, have high {{{Σ }}}1 (the projected density within the central 1 kpc), while younger, star-forming galaxies span a much broader range of {{{Σ }}}1, which includes the high values observed for quenched galaxies, but also extends to much lower values. As galaxies age and quench, the stellar age and the dispersion of {{{Σ }}}1 for fixed values of M * shows two different regimes: one at the low-mass end, where quenching might be driven by causes external to the galaxies; the other at the high-mass end, where quenching is driven by internal causes, very likely the mass given the low scatter of {{{Σ }}}1 (mass quenching). We suggest that the monotonic increase of central density as galaxies grow is one manifestation of a more general phenomenon of structural transformation that galaxies undergo as they evolve.

  10. DeNovoGUI: An Open Source Graphical User Interface for de Novo Sequencing of Tandem Mass Spectra

    PubMed Central

    2013-01-01

    De novo sequencing is a popular technique in proteomics for identifying peptides from tandem mass spectra without having to rely on a protein sequence database. Despite the strong potential of de novo sequencing algorithms, their adoption threshold remains quite high. We here present a user-friendly and lightweight graphical user interface called DeNovoGUI for running parallelized versions of the freely available de novo sequencing software PepNovo+, greatly simplifying the use of de novo sequencing in proteomics. Our platform-independent software is freely available under the permissible Apache2 open source license. Source code, binaries, and additional documentation are available at http://denovogui.googlecode.com. PMID:24295440

  11. Discrimination of multilocus sequence typing-based Campylobacter jejuni subgroups by MALDI-TOF mass spectrometry.

    PubMed

    Zautner, Andreas Erich; Masanta, Wycliffe Omurwa; Tareen, Abdul Malik; Weig, Michael; Lugert, Raimond; Groß, Uwe; Bader, Oliver

    2013-11-07

    Campylobacter jejuni, the most common bacterial pathogen causing gastroenteritis, shows a wide genetic diversity. Previously, we demonstrated by the combination of multi locus sequence typing (MLST)-based UPGMA-clustering and analysis of 16 genetic markers that twelve different C. jejuni subgroups can be distinguished. Among these are two prominent subgroups. The first subgroup contains the majority of hyperinvasive strains and is characterized by a dimeric form of the chemotaxis-receptor Tlp7(m+c). The second has an extended amino acid metabolism and is characterized by the presence of a periplasmic asparaginase (ansB) and gamma-glutamyl-transpeptidase (ggt). Phyloproteomic principal component analysis (PCA) hierarchical clustering of MALDI-TOF based intact cell mass spectrometry (ICMS) spectra was able to group particular C. jejuni subgroups of phylogenetic related isolates in distinct clusters. Especially the aforementioned Tlp7(m+c)(+) and ansB+/ ggt+ subgroups could be discriminated by PCA. Overlay of ICMS spectra of all isolates led to the identification of characteristic biomarker ions for these specific C. jejuni subgroups. Thus, mass peak shifts can be used to identify the C. jejuni subgroup with an extended amino acid metabolism. Although the PCA hierarchical clustering of ICMS-spectra groups the tested isolates into a different order as compared to MLST-based UPGMA-clustering, the isolates of the indicator-groups form predominantly coherent clusters. These clusters reflect phenotypic aspects better than phylogenetic clustering, indicating that the genes corresponding to the biomarker ions are phylogenetically coupled to the tested marker genes. Thus, PCA clustering could be an additional tool for analyzing the relatedness of bacterial isolates.

  12. Low-resolution spectroscopy of main sequence stars belonging to 12 Galactic globular clusters. I. CH and CN band strength variations

    NASA Astrophysics Data System (ADS)

    Pancino, E.; Rejkuba, M.; Zoccali, M.; Carrera, R.

    2010-12-01

    Context. Globular clusters show star-to-star abundance variations for light elements that are not yet well understood. The preferred explanation involves a self-enrichment scenario, within which two subsequent generations of stars co-exist in globular clusters. Observations of chemical abundances in the main sequence and sub-giant branch stars allow us to investigate the signature of this chemically processed material without the complicating effects caused by stellar evolution and internal mixing. Aims: Our main goal is to investigate the carbon-nitrogen anti-correlation with low-resolution spectroscopy of 20-50 stars fainter than the first dredge-up in seven Galactic globular clusters (NGC 288, NGC 1851, NGC 5927, NGC 6352, NGC 6388, and Pal 12) with different properties. We complemented our observations with 47 Tuc archival data, with four additional clusters from the literature (M 15, M 22, M 55, NGC 362), and with additional literature data on NGC 288. Methods: In this first paper, we measured the strengh of the CN and CH band indices, which correlate with the N and C abundances, and we investigated the anti-correlation and bimodality of these indices. We compared rCN, the ratio of stars belonging to the CN-strong and weak groups, with 15 different cluster parameters. Results: We clearly see bimodal anti-correlation of the CH and CN band stregths in the metal-rich clusters (Pal 12, 47 Tuc, NGC 6352, NGC 5927). Only M 15 among the metal-poor clusters shows a clearly bimodal anti-correlation. We found weak correlations (sligthly above 1σ) of rCN with the cluster orbital parameters, present-day total mass, cluster concentration, and age. Conclusions: Our findings support the self-enrichment scenario, and suggest that the occurrence of more than two major generations of stars in a GGC should be rare. Small additional generations (<10-20% of the total) would be difficult to detect with our samples. The first generation, which corresponds to the CN-weak stars

  13. Ranked solutions to a class of combinatorial optimizations - with applications in mass spectrometry based peptide sequencing

    NASA Astrophysics Data System (ADS)

    Doerr, Timothy; Alves, Gelio; Yu, Yi-Kuo

    2006-03-01

    Typical combinatorial optimizations are NP-hard; however, for a particular class of cost functions the corresponding combinatorial optimizations can be solved in polynomial time. This suggests a way to efficiently find approximate solutions - - find a transformation that makes the cost function as similar as possible to that of the solvable class. After keeping many high-ranking solutions using the approximate cost function, one may then re-assess these solutions with the full cost function to find the best approximate solution. Under this approach, it is important to be able to assess the quality of the solutions obtained, e.g., by finding the true ranking of kth best approximate solution when all possible solutions are considered exhaustively. To tackle this statistical issue, we provide a systematic method starting with a scaling function generated from the fininte number of high- ranking solutions followed by a convergent iterative mapping. This method, useful in a variant of the directed paths in random media problem proposed here, can also provide a statistical significance assessment for one of the most important proteomic tasks - - peptide sequencing using tandem mass spectrometry data.

  14. A Quantitative Tool to Distinguish Isobaric Leucine and Isoleucine Residues for Mass Spectrometry-Based De Novo Monoclonal Antibody Sequencing

    NASA Astrophysics Data System (ADS)

    Poston, Chloe N.; Higgs, Richard E.; You, Jinsam; Gelfanova, Valentina; Hale, John E.; Knierman, Michael D.; Siegel, Robert; Gutierrez, Jesus A.

    2014-07-01

    De novo sequencing by mass spectrometry (MS) allows for the determination of the complete amino acid (AA) sequence of a given protein based on the mass difference of detected ions from MS/MS fragmentation spectra. The technique relies on obtaining specific masses that can be attributed to characteristic theoretical masses of AAs. A major limitation of de novo sequencing by MS is the inability to distinguish between the isobaric residues leucine (Leu) and isoleucine (Ile). Incorrect identification of Ile as Leu or vice versa often results in loss of activity in recombinant antibodies. This functional ambiguity is commonly resolved with costly and time-consuming AA mutation and peptide sequencing experiments. Here, we describe a set of orthogonal biochemical protocols, which experimentally determine the identity of Ile or Leu residues in monoclonal antibodies (mAb) based on the selectivity that leucine aminopeptidase shows for n-terminal Leu residues and the cleavage preference for Leu by chymotrypsin. The resulting observations are combined with germline frequencies and incorporated into a logistic regression model, called Predictor for Xle Sites (PXleS) to provide a statistical likelihood for the identity of Leu at an ambiguous site. We demonstrate that PXleS can generate a probability for an Xle site in mAbs with 96% accuracy. The implementation of PXleS precludes the expression of several possible sequences and, therefore, reduces the overall time and resources required to go from spectra generation to a biologically active sequence for a mAb when an Ile or Leu residue is in question.

  15. A quantitative tool to distinguish isobaric leucine and isoleucine residues for mass spectrometry-based de novo monoclonal antibody sequencing.

    PubMed

    Poston, Chloe N; Higgs, Richard E; You, Jinsam; Gelfanova, Valentina; Hale, John E; Knierman, Michael D; Siegel, Robert; Gutierrez, Jesus A

    2014-07-01

    De novo sequencing by mass spectrometry (MS) allows for the determination of the complete amino acid (AA) sequence of a given protein based on the mass difference of detected ions from MS/MS fragmentation spectra. The technique relies on obtaining specific masses that can be attributed to characteristic theoretical masses of AAs. A major limitation of de novo sequencing by MS is the inability to distinguish between the isobaric residues leucine (Leu) and isoleucine (Ile). Incorrect identification of Ile as Leu or vice versa often results in loss of activity in recombinant antibodies. This functional ambiguity is commonly resolved with costly and time-consuming AA mutation and peptide sequencing experiments. Here, we describe a set of orthogonal biochemical protocols, which experimentally determine the identity of Ile or Leu residues in monoclonal antibodies (mAb) based on the selectivity that leucine aminopeptidase shows for n-terminal Leu residues and the cleavage preference for Leu by chymotrypsin. The resulting observations are combined with germline frequencies and incorporated into a logistic regression model, called Predictor for Xle Sites (PXleS) to provide a statistical likelihood for the identity of Leu at an ambiguous site. We demonstrate that PXleS can generate a probability for an Xle site in mAbs with 96% accuracy. The implementation of PXleS precludes the expression of several possible sequences and, therefore, reduces the overall time and resources required to go from spectra generation to a biologically active sequence for a mAb when an Ile or Leu residue is in question.

  16. 16S rRNA Gene Sequencing, Multilocus Sequence Analysis, and Mass Spectrometry Identification of the Proposed New Species “Clostridium neonatale”

    PubMed Central

    Bouvet, Philippe; Ferraris, Laurent; Dauphin, Brunhilde; Popoff, Michel-Robert; Butel, Marie Jose

    2014-01-01

    In 2002, an outbreak of necrotizing enterocolitis in a Canadian neonatal intensive care unit was associated with a proposed novel species of Clostridium, “Clostridium neonatale.” To date, there are no data about the isolation, identification, or clinical significance of this species. Additionally, C. neonatale has not been formally classified as a new species, rendering its identification challenging. Indeed, the C. neonatale 16S rRNA gene sequence shows high similarity to another Clostridium species involved in neonatal necrotizing enterocolitis, Clostridium butyricum. By performing a polyphasic study combining phylogenetic analysis (16S rRNA gene sequencing and multilocus sequence analysis) and phenotypic characterization with mass spectrometry, we demonstrated that C. neonatale is a new species within the Clostridium genus sensu stricto, for which we propose the name Clostridium neonatale sp. nov. Now that the status of C. neonatale has been clarified, matrix-assisted laser desorption ionization–time of flight mass spectrometry (MALDI-TOF MS) can be used for better differential identification of C. neonatale and C. butyricum clinical isolates. This is necessary to precisely define the role and clinical significance of C. neonatale, a species that may have been misidentified and underrepresented during previous neonatal necrotizing enterocolitis studies. PMID:25232167

  17. Stress rotations due to the M6.5 foreshock and M7.3 main shock in the 2016 Kumamoto, SW Japan, earthquake sequence

    NASA Astrophysics Data System (ADS)

    Yoshida, Keisuke; Hasegawa, Akira; Saito, Tatsuhiko; Asano, Youichi; Tanaka, Sachiko; Sawazaki, Kaoru; Urata, Yumi; Fukuyama, Eiichi

    2016-10-01

    A shallow M7.3 event with a M6.5 foreshock occurred along the Futagawa-Hinagu fault zone in Kyushu, SW Japan. We investigated the spatiotemporal variation of the stress orientations in and around the source area of this 2016 Kumamoto earthquake sequence by inverting 1218 focal mechanisms. The results show that the σ3 axis in the vicinity of the fault plane significantly rotated counterclockwise after the M6.5 foreshock and rotated clockwise after the M7.3 main shock in the Hinagu fault segment. This observation indicates that a significant portion of the shear stress was released both by the M6.5 foreshock and M7.3 main shock. It is estimated that the stress release by the M6.5 foreshock occurred in the shallower part of the Hinagu fault segment, which brought the stress concentration in its deeper part. This might have caused the M7.3 main shock rupture mainly along the deeper part of the Hinagu fault segment after 28 h.

  18. Negative electrospray ionization mass spectrometry: a method for sequencing and determining linkage position in oligosaccharides from branched hemicelluloses.

    PubMed

    Quéméner, Bernard; Vigouroux, Jacqueline; Rathahao, Estelle; Tabet, Jean Claude; Dimitrijevic, Aleksandra; Lahaye, Marc

    2015-01-01

    Xyloglucans of apple, tomato, bilberry and tamarind were hydrolyzed by commercial endo β-1-4-D-endoglucanase. The xylo-gluco-oligosaccharides (XylGos) released were separated on CarboPac PA 200 column in less than 15 min, and, after purification, they were structurally characterized by negative electrospray ionization mass spectrometry using a quadrupole time-of-flight (ESI-Q-TOF), a hybrid linear ion trap (LTQ)/Orbitrap and a hybrid quadrupole Fourier transform ion cyclotron resonance (FT-ICR) mass spectrometers. In order to corroborate the fragmentation routes observed on XylGos, some commercial galacto-manno-oligosaccharides (GalMOs) and glucurono-xylo-oligosaccharides were also studied. The fragmentation pathways of the ionized GalMos were similar to those of XylGos ones. The product ion spectra were mainly characterized by prominent double cleavage (D) ions corresponding to the entire inner side chains. The directed fragmentation from the reducing end to the other end was observed for the main glycosylated backbone but also for the side-chains, allowing their complete sequencing. Relevant cross-ring cleavage ions from (0,2)X(j)-type revealed to be diagnostic of the 1-2-linked- glycosyl units from XylGos together with the 1-2-linked glucuronic acid unit from glucuronoxylans. Resonant activation in the LTQ Orbitrap allowed not only determining the type of all linkages but also the O-acetyl group location on fucosylated side-chains. Moreover, the fragmentation of the different side chains using the MS(n) capabilities of the LTQ/Orbitrap analyzer also allowed differentiating terminal arabinosyl and xylosyl substituents inside S and U side-chains of XylGos, respectively. The CID spectra obtained were very informative for distinction of isomeric structures differing only in their substitution pattern. These features together makes the fragmentation in negative ionization mode a relevant and powerful technique useful to highlight the subtle structural changes

  19. Global microbial carbonate proliferation after the end-Devonian mass extinction: Mainly controlled by demise of skeletal bioconstructors

    PubMed Central

    Yao, Le; Aretz, Markus; Chen, Jitao; Webb, Gregory E.; Wang, Xiangdong

    2016-01-01

    Microbial carbonates commonly flourished following mass extinction events. The end-Devonian (Hangenberg) mass extinction event is a first-order mass extinction on the scale of the ‘Big Five’ extinctions. However, to date, it is still unclear whether global microbial carbonate proliferation occurred after the Hangenberg event. The earliest known Carboniferous stromatolites on tidal flats are described from intertidal environments of the lowermost Tournaisian (Qianheishan Formation) in northwestern China. With other early Tournaisian microbe-dominated bioconstructions extensively distributed on shelves, the Qianheishan stromatolites support microbial carbonate proliferation after the Hangenberg extinction. Additional support comes from quantitative analysis of the abundance of microbe-dominated bioconstructions through the Famennian and early Tournaisian, which shows that they were globally distributed (between 40° latitude on both sides of the palaeoequator) and that their abundance increased distinctly in the early Tournaisian compared to the latest Devonian (Strunian). Comparison of variations in the relative abundance of skeleton- versus microbe-dominated bioconstructions across the Hangenberg and ‘Big Five’ extinctions suggests that changes in abundance of skeletal bioconstructors may play a first-order control on microbial carbonate proliferation during extinction transitions but that microbial proliferation is not a general necessary feature after mass extinctions. PMID:28009013

  20. Microwave-assisted acid and base hydrolysis of intact proteins containing disulfide bonds for protein sequence analysis by mass spectrometry.

    PubMed

    Reiz, Bela; Li, Liang

    2010-09-01

    Controlled hydrolysis of proteins to generate peptide ladders combined with mass spectrometric analysis of the resultant peptides can be used for protein sequencing. In this paper, two methods of improving the microwave-assisted protein hydrolysis process are described to enable rapid sequencing of proteins containing disulfide bonds and increase sequence coverage, respectively. It was demonstrated that proteins containing disulfide bonds could be sequenced by MS analysis by first performing hydrolysis for less than 2 min, followed by 1 h of reduction to release the peptides originally linked by disulfide bonds. It was shown that a strong base could be used as a catalyst for microwave-assisted protein hydrolysis, producing complementary sequence information to that generated by microwave-assisted acid hydrolysis. However, using either acid or base hydrolysis, amide bond breakages in small regions of the polypeptide chains of the model proteins (e.g., cytochrome c and lysozyme) were not detected. Dynamic light scattering measurement of the proteins solubilized in an acid or base indicated that protein-protein interaction or aggregation was not the cause of the failure to hydrolyze certain amide bonds. It was speculated that there were some unknown local structures that might play a role in preventing an acid or base from reacting with the peptide bonds therein. 2010 American Society for Mass Spectrometry. Published by Elsevier Inc. All rights reserved.

  1. Extended Main-sequence Turn-offs in Intermediate-age Star Clusters: Stellar Rotation Diminishes, but Does Not Eliminate, Age Spreads

    SciTech Connect

    Goudfrooij, Paul; Correnti, Matteo; Girardi, Léo, E-mail: goudfroo@stsci.edu

    Extended main-sequence turn-off (eMSTO) regions are a common feature in color–magnitude diagrams of young- and intermediate-age star clusters in the Magellanic Clouds. The nature of eMSTOs remains debated in the literature. The currently most popular scenarios are extended star formation activity and ranges of stellar rotation rates. Here we study details of differences in main-sequence turn-off (MSTO) morphology expected from spreads in age versus spreads in rotation rates, using Monte Carlo simulations with the Geneva syclist isochrone models that include the effects of stellar rotation. We confirm a recent finding of Niederhofer et al. that a distribution of stellar rotationmore » velocities yields an MSTO extent that is proportional to the cluster age, as observed. However, we find that stellar rotation yields MSTO crosscut widths that are generally smaller than observed ones at a given age. We compare the simulations with high-quality Hubble Space Telescope data of NGC 1987 and NGC 2249, which are the two only relatively massive star clusters with an age of ∼1 Gyr for which such data is available. We find that the distribution of stars across the eMSTOs of these clusters cannot be explained solely by a distribution of stellar rotation velocities, unless the orientations of rapidly rotating stars are heavily biased toward an equator-on configuration. Under the assumption of random viewing angles, stellar rotation can account for ∼60% and ∼40% of the observed FWHM widths of the eMSTOs of NGC 1987 and NGC 2249, respectively. In contrast, a combination of distributions of stellar rotation velocities and stellar ages fits the observed eMSTO morphologies very well.« less

  2. Multiple stellar populations in Magellanic Cloud clusters - III. The first evidence of an extended main sequence turn-off in a young cluster: NGC 1856

    NASA Astrophysics Data System (ADS)

    Milone, A. P.; Bedin, L. R.; Piotto, G.; Marino, A. F.; Cassisi, S.; Bellini, A.; Jerjen, H.; Pietrinferni, A.; Aparicio, A.; Rich, R. M.

    2015-07-01

    Recent studies have shown that the extended main-sequence turn-off (eMSTO) is a common feature of intermediate-age star clusters in the Magellanic Clouds (MCs). The most simple explanation is that these stellar systems harbour multiple generations of stars with an age difference of a few hundred million years. However, while an eMSTO has been detected in a large number of clusters with ages between ˜1-2 Gyr, several studies of young clusters in both MCs and in nearby galaxies do not find any evidence for a prolonged star formation history, i. e. for multiple stellar generations. These results have suggested alternative interpretation of the eMSTOs observed in intermediate-age star clusters. The eMSTO could be due to stellar rotation mimicking an age spread or to interacting binaries. In these scenarios, intermediate-age MC clusters would be simple stellar populations, in close analogy with younger clusters. Here, we provide the first evidence for an eMSTO in a young stellar cluster. We exploit multiband Hubble Space Telescope photometry to study the ˜300-Myr old star cluster NGC 1856 in the Large Magellanic Cloud and detected a broadened MSTO that is consistent with a prolonged star formation which had a duration of about 150 Myr. Below the turn-off, the main sequence (MS) of NGC 1856 is split into a red and blue component, hosting 33 ± 5 and 67 ± 5 per cent of the total number of MS stars, respectively. We discuss these findings in the context of multiple-stellar-generation, stellar-rotation, and interacting-binary hypotheses.

  3. Defining the problem, main objective, and strategies of medical management in mass-casualty incidents caused by terrorist events.

    PubMed

    Ashkenazi, Itamar; Kessel, Boris; Olsha, Oded; Khashan, Tawfik; Oren, Meir; Haspel, Jacob; Alfici, Ricardo

    2008-01-01

    Based on the experience of managing > 20 such events during the last decade, the authors' understanding of a mass-casualty incident is that it is an event in which there may be many victims, but only a few that actually suffer from life-threatening injuries. To make an impact on survival, one must identify those who are severely wounded as quickly as possible and offer those patients optimal care. Experienced trauma physicians are the most important resource available to achieve this objective, and they should be allocated to the treatment of seriously injured victims instead of more traditional management roles such as triage and incident manager.

  4. Fluid mass and thermal loading effects on the modal characteristics of space shuttle main engine liquid oxygen inlet splitter vanes

    NASA Technical Reports Server (NTRS)

    Panossian, H. V.; Boehnlein, J. J.

    1987-01-01

    An analysis and evaluation of experimental modal survey test data on the variations of modal characteristics induced by pressure and thermal loading events are presented. Extensive modal survey tests were carried out on a Space Shuttle Main Engine (SSME) test article using liquid nitrogen under cryogenic temperatures and high pressures. The results suggest that an increase of pressure under constant cryogenic temperature or a decrease of temperature under high pressure induces an upward shift of frequencies of various modes of the structures.

  5. A major allergen in rainbow trout (Oncorhynchus mykiss): complete sequences of parvalbumin by MALDI tandem mass spectrometry.

    PubMed

    Aiello, Donatella; Materazzi, Stefano; Risoluti, Roberta; Thangavel, Hariprasad; Di Donna, Leonardo; Mazzotti, Fabio; Casadonte, Francesca; Siciliano, Carlo; Sindona, Giovanni; Napoli, Anna

    2015-08-01

    Fish parvalbumin (PRVB) is an abundant and stable protein in fish meat. The variation in cross-reactivity among individuals is well known and explained by a broad repertoire of molecular forms and differences between IgE-binding epitopes in fish species. PVRB has "sequential" epitopes, which retain their IgE-binding capacity and allergenicity also after heating and digestion using proteolytic enzymes. From the allergonomics perspective, PRVB is still a challenging target due to its multiple isoforms present at different degrees of distribution. Little information is available in the databases about PVRBs from Oncorhynchus mykiss. At present, only two validated, incomplete isoforms of this species are included in the protein databases: parvalbumin beta 1 (P86431) and parvalbumin beta 2 (P86432). A simple and rapid protocol has been developed for selective solubilization of PRVB from the muscle of farmed rainbow trout (Oncorhynchus mykiss), followed by calcium depletion, proteolytic digestion, MALDI MS, and MS/MS analysis. With this strategy thermal allergen release was assessed and PRVB1 (P86431), PRVB1.1, PRVB2 (P86432) and PRVB2.1 variants from the rainbow trout were sequenced. The correct ordering of peptide sequences was aided by mapping the overlapping enzymatic digests. The deduced peptide sequences were arranged and the theoretical molecular masses (Mr) of the resulting sequences were calculated. Experimental masses (Mr) of each PRVB variant were measured by linear MALDI-TOF.

  6. Comment on "Protein sequences from mastodon and Tyrannosaurus rex revealed by mass spectrometry".

    PubMed

    Buckley, Mike; Walker, Angela; Ho, Simon Y W; Yang, Yue; Smith, Colin; Ashton, Peter; Oates, Jane Thomas; Cappellini, Enrico; Koon, Hannah; Penkman, Kirsty; Elsworth, Ben; Ashford, Dave; Solazzo, Caroline; Andrews, Phillip; Strahler, John; Shapiro, Beth; Ostrom, Peggy; Gandhi, Hasand; Miller, Webb; Raney, Brian; Zylber, Maria Ines; Gilbert, M Thomas P; Prigodich, Richard V; Ryan, Michael; Rijsdijk, Kenneth F; Janoo, Anwar; Collins, Matthew J

    2008-01-04

    We used authentication tests developed for ancient DNA to evaluate claims by Asara et al. (Reports, 13 April 2007, p. 280) of collagen peptide sequences recovered from mastodon and Tyrannosaurus rex fossils. Although the mastodon samples pass these tests, absence of amino acid composition data, lack of evidence for peptide deamidation, and association of alpha1(I) collagen sequences with amphibians rather than birds suggest that T. rex does not.

  7. Identification of single amino acid substitutions (SAAS) in neuraminidase from influenza a virus (H1N1) via mass spectrometry analysis coupled with de novo peptide sequencing.

    PubMed

    Peng, Qisheng; Wang, Zijian; Wu, Donglin; Li, Xiaoou; Liu, Xiaofeng; Sun, Wanchun; Liu, Ning

    2016-08-01

    Amino acid substitutions in the neuraminidase of the influenza virus are the main cause of the emergence of resistance to zanamivir or oseltamivir during seasonal influenza treatment; they are the result of non-synonymous mutations in the viral genome that can be successfully detected by polymer chain reaction (PCR)-based approaches. There is always an urgent need to detect variation in amino acid sequences directly at the protein level. Mass spectrometry coupled with de novo sequencing has been explored as an alternative and straightforward strategy for detecting amino acid substitutions, as well - this approach is the primary focus of the present study. Influenza virus (A/Puerto Rico/8/1934 H1N1) propagated in embryonated chicken eggs was purified by ultracentrifugation, followed by PNGase F treatment. The deglycosylated virion was lysed and separated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). The gel band corresponding to neuraminidase was picked up and subjected to liquid chromatography tandem mass spectrometry (LC-MS/MS) analysis. LC-MS/MS analyses, coupled with manual de novo sequencing, allowed the determination of three amino acid substitutions: R346K, S349 N, and S370I/L, in the neuraminidase from the influenza virus (A/Puerto Rico/8/1934 H1N1), which were located in three mutated peptides of the neuraminidase: YGNGVWIGK, TKNHSSR, and PNGWTETDI/LK, respectively. We found that the amino acid substitutions in the proteins of RNA viruses (including influenza A virus) resulting from non-synonymous gene mutations can indeed be directly analyzed via mass spectrometry, and that manual interpretation of the MS/MS data may be beneficial. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

  8. A Search for Coronal Emission at the Bottom of the Main-Sequence: Stars and Brown Dwarf Candidates with Spectral Types Later than M7 and the Rotation-Activity Relation

    NASA Technical Reports Server (NTRS)

    Stringfellow, Guy

    2004-01-01

    This program intended to test whether the lowest mass stars at the bottom end of the main sequence and the lower mass brown dwarfs have coronae. If they have coronae, what are the coronal characteristics and what drives them? In the classical dynamo picture, the closed magnetic loop structure is generated near the boundary of the convective envelope and the radiative core. Stars with mass below 0.30 Msun however are fully convective, and the nature of the dynamo responsible for the generation of the coronae in this regime is poorly understood. Previous results from the ROSAT mission (e.g., Fleming et al. 1993, 1995; Schmitt et al. 1995) had confirmed three very important characteristics of M-star coronae: (1) a very high percentage of all M dwarfs have coronae (of order 85% in the local 7 pc sample), (2) those M dwarfs showing high chromospheric activity, such as having the Balmer series in emission or large/numerous optical flaring, indeed exhibit the highest coronal activity, and (3) that the maximum saturation boundary in X-ray luminosity, which amounts to 0.0001-0.001 for Lx/Lbol for the dMe stars, extends down to the current detection limit, through spectral types M7. It was likely that the incompleteness noted for result (1) above was simply a detection limit problem; for more distant sources, the X-ray fainter dM stars will drop below detection thresholds before the more X-ray luminous dMe stars. The latest stars for which direct detection of the corona had been successful were of spectral type dM7 (e.g., VB8, LHS 3003). This program proposed to obtain ROSAT HRI observations for a large number of the coolest known (at that time) stars at the bottom of the main-sequence, which had spectral types of M9 or later. Three stars were approved for observations with ROSAT-HRI totaling 180 ksec. The goal was to obtain X-ray detections or low upper limits for the three approved stars.

  9. Sequence Elucidation of an Unknown Cyclic Peptide of High Doping Potential by ETD and CID Tandem Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Guan, Fuyu; Uboh, Cornelius E.; Soma, Lawrence R.; Rudy, Jeffrey

    2011-04-01

    Identification of an unknown substance without any information remains a daunting challenge despite advances in chemistry and mass spectrometry. However, an unknown cyclic peptide in a sample with very limited volume seized at a Pennsylvania racetrack has been successfully identified. The unknown sample was determined by accurate mass measurements to contain a small unknown peptide as the major component. Collision-induced dissociation (CID) of the unknown peptide revealed the presence of Lys (not Gln, by accurate mass), Phe, and Arg residues, and absence of any y-type product ion. The latter, together with the tryptic digestion results of the unusual deamidation and absence of any tryptic cleavage, suggests a cyclic structure for the peptide. Electron-transfer dissociation (ETD) of the unknown peptide indicated the presence of Gln (not Lys, by the unusual deamidation), Phe, and Arg residues and their connectivity. After all the results were pieced together, a cyclic tetrapeptide, cyclo[Arg-Lys-N(C6H9)Gln-Phe], is proposed for the unknown peptide. Observations of different amino acid residues from CID and ETD experiments for the peptide were interpreted by a fragmentation pathway proposed, as was preferential CID loss of a Lys residue from the peptide. ETD was used for the first time in sequencing of a cyclic peptide; product ions resulting from ETD of the peptide identified were categorized into two types and named pseudo-b and pseudo-z ions that are important for sequencing of cyclic peptides. The ETD product ions were interpreted by fragmentation pathways proposed. Additionally, multi-stage CID mass spectrometry cannot provide complete sequence information for cyclic peptides containing adjacent Arg and Lys residues. The identified cyclic peptide has not been documented in the literature, its pharmacological effects are unknown, but it might be a "designer" drug with athletic performance-enhancing effects.

  10. Mass balances of mercury and nitrogen in burned and unburned forested watersheds at Acadia National Park, Maine, USA

    USGS Publications Warehouse

    Nelson, S.J.; Johnson, K.B.; Kahl, J.S.; Haines, T.A.; Fernandez, I.J.

    2007-01-01

    Precipitation and streamwater samples were collected from 16 November 1999 to 17 November 2000 in two watersheds at Acadia National Park, Maine, and analyzed for mercury (Hg) and dissolved inorganic nitrogen (DIN, nitrate plus ammonium). Cadillac Brook watershed burned in a 1947 fire that destroyed vegetation and soil organic matter. We hypothesized that Hg deposition would be higher at Hadlock Brook (the reference watershed, 10.2 ??g/m2/year) than Cadillac (9.4 ??g/m2/year) because of the greater scavenging efficiency of the softwood vegetation in Hadlock. We also hypothesized the Hg and DIN export from Cadillac Brook would be lower than Hadlock Brook because of elemental volatilization during the fire, along with subsequently lower rates of atmospheric deposition in a watershed with abundant bare soil and bedrock, and regenerating vegetation. Consistent with these hypotheses, Hg export was lower from Cadillac Brook watershed (0.4 ??g/m2/year) than from Hadlock Brook watershed (1.3 ??g/m2/year). DIN export from Cadillac Brook (11.5 eq/ ha/year) was lower than Hadlock Brook (92.5 eq/ha/year). These data show that ??50 years following a wildfire there was lower atmospheric deposition due to changes in forest species composition, lower soil pools, and greater ecosystem retention for both Hg and DIN. ?? Springer Science + Business Media B.V. 2006.

  11. Mass balances of mercury and nitrogen in burned and unburned forested watersheds at Acadia National Park, Maine, USA.

    PubMed

    Nelson, S J; Johnson, K B; Kahl, J S; Haines, T A; Fernandez, I J

    2007-03-01

    Precipitation and streamwater samples were collected from 16 November 1999 to 17 November 2000 in two watersheds at Acadia National Park, Maine, and analyzed for mercury (Hg) and dissolved inorganic nitrogen (DIN, nitrate plus ammonium). Cadillac Brook watershed burned in a 1947 fire that destroyed vegetation and soil organic matter. We hypothesized that Hg deposition would be higher at Hadlock Brook (the reference watershed, 10.2 microg/m(2)/year) than Cadillac (9.4 microg/m(2)/year) because of the greater scavenging efficiency of the softwood vegetation in Hadlock. We also hypothesized the Hg and DIN export from Cadillac Brook would be lower than Hadlock Brook because of elemental volatilization during the fire, along with subsequently lower rates of atmospheric deposition in a watershed with abundant bare soil and bedrock, and regenerating vegetation. Consistent with these hypotheses, Hg export was lower from Cadillac Brook watershed (0.4 microg/m(2)/year) than from Hadlock Brook watershed (1.3 microg/m(2)/year). DIN export from Cadillac Brook (11.5 eq/ha/year) was lower than Hadlock Brook (92.5 eq/ha/year). These data show that approximately 50 years following a wildfire there was lower atmospheric deposition due to changes in forest species composition, lower soil pools, and greater ecosystem retention for both Hg and DIN.

  12. A novel tandem mass spectrometry method for first-line screening of mainly beta-thalassemia from dried blood spots.

    PubMed

    Yu, Chaowen; Huang, Shuodan; Wang, Ming; Zhang, Juan; Liu, Hao; Yuan, Zhaojian; Wang, Xingbin; He, Xiaoyan; Wang, Jie; Zou, Lin

    2017-02-10

    Traditional methods for thalassemia screening are time-consuming and easily affected by cell hemolysis or hemoglobin degradation in stored blood samples. Tandem mass spectrometry (MS/MS) proved to be an effective technology for sickle cell disorders (SCD) screening. Here, we developed a novel MS/MS method for β-thalassemia screening from dried blood spots (DBS). Stable isotopic-labeled peptides were used as internal standards for quantification and calculation of the α:β-globin ratios. We used the α:β-globin ratio cutoffs to differentiate between normal individuals and patients with thalassemia. About 781 patients and 300 normal individuals were analyzed. The α:β-globin ratios showed significant difference between normal and β-thalassemia patients (P<0.01), particularly when the disease was homozygous or double heterozygous with another α- or β-thalassemia mutation. In the parallel study, all cases screened for suspected thalassemia from six hundred DBS samples by using this MS/MS method were successfully confirmed by genotyping. The intra-assay and inter-assay CVs of the ratios ranged from 2.4% to 3.9% and 4.7% to 7.1%, and there was no significant sample carryover or matrix effect for this MS/MS method. Combined with SCD screening, this MS/MS method could be used as a first-line screening assay for both structural and expression abnormalities of human hemoglobin. Traditional methods for thalassemia screening were depending on the structural integrity of tetramers and could be affected by hemolysis and degradation of whole blood samples, especially when stored. We used proteospecific peptides produced by the tryptic digestion of each globin to evaluate the production ratio between α- and β-globin chains, which turned out to be quite stable even when stored for more than two months. Though most of the peptides were specific to α-globin or β-globin, we only chose four most informative peptides and its stable isotopic-labeled peptides as internal

  13. Comment on "Protein sequences from mastodon and Tyrannosaurus rex revealed by mass spectrometry".

    PubMed

    Pevzner, Pavel A; Kim, Sangtae; Ng, Julio

    2008-08-22

    Asara et al. (Reports, 13 April 2007, p. 280) reported sequencing of Tyrannosaurus rex proteins and used them to establish the evolutionary relationships between birds and dinosaurs. We argue that the reported T. rex peptides may represent statistical artifacts and call for complete data release to enable experimental and computational verification of their findings.

  14. Identification of multiple serine to asparagine sequence variation sites in an intended copy product of LUCENTIS® by mass spectrometry.

    PubMed

    Griaud, François; Winter, Andrej; Denefeld, Blandine; Lang, Manuel; Hensinger, Héloïse; Straube, Frank; Sackewitz, Mirko; Berg, Matthias

    Patent expiration of first-generation biologics and the high cost of innovative biologics are 2 drivers for the development of biosimilar products. There are, however, technical challenges to the production of exact copies of such large molecules. In this study, we performed a head-to-head comparison between the originator anti-VEGF-A Fab product LUCENTIS® (ranibizumab) and an intended copy product using an integrated analytical approach. While no differences could be observed using size-exclusion chromatography, capillary electrophoresis-sodium dodecyl sulfate and potency assays, different acidic peaks were identified with cation ion exchange chromatography and capillary zone electrophoresis. Further investigation of the intact Fab, subunits and primary sequence with mass spectrometry demonstrated the presence of a modified light chain variant in the intended copy product batches. This variant was characterized with a mass increase of 27.01 Da compared to the originator sequence and its abundance was estimated in the range of 6-9% of the intended copy product light chain. MS/MS spectra interrogation confirmed that this modification relates to a serine to asparagine sequence variant found in the intended copy product light chain. We demonstrated that the integration of high-resolution and sensitive orthogonal technologies was beneficial to assess the similarity of an originator and an intended copy product.

  15. IUE observations of pre-main-sequence stars. I - Mg II and Ca II resonance line fluxes for T Tauri stars

    NASA Technical Reports Server (NTRS)

    Giampapa n, M. S.

    1981-01-01

    IUE satellite and Lick 3 m reflector image tube scanner measurements of the Mg II and Ca II resonance lines in a sample of T Tauri stars are the basis of a discussion of the Mg II h and k line emission and the Ca II H and K line emission, within the context of stellar chromospheres. Corroborative evidence is presented for the chromospheric origin of these resonance lines, and chromospheric radiative loss rates in the Mg II and Ca II resonance lines are derived. It is found that the degree of nonradiative heating present in the outer atmospheres of T Tauri stars generally exceeds that of the RS CVn systems, as well as the dMe stars and other active chromospheric dwarfs, and it is inferred that the surfaces of such pre-main sequence stars are covered by regions similar to solar plages. The mean chromospheric electron density of T Tauri stars is determined as 10 to the 11th/cu cm.

  16. RADIO PROPERTIES OF THE BAT AGNs: THE FIR–RADIO RELATION, THE FUNDAMENTAL PLANE, AND THE MAIN SEQUENCE OF STAR FORMATION

    SciTech Connect

    Smith, Krista Lynne; Mushotzky, Richard F.; Vogel, Stuart

    We conducted 22 GHz 1″ JVLA imaging of 70 radio-quiet active galactic nuclei (AGNs) from the Swift -BAT survey. We find radio cores in all but three objects. The radio morphologies of the sample fall into three groups: compact and core-dominated, extended, and jet-like. We spatially decompose each image into core flux and extended flux, and compare the extended radio emission with that predicted from previous Herschel observations using the canonical FIR–radio relation. After removing the AGN contribution to the FIR and radio flux densities, we find that the relation holds remarkably well despite the potentially different star formation physics inmore » the circumnuclear environment. We also compare our core radio flux densities with predictions of coronal models and scale-invariant jet models for the origin of radio emission in radio-quiet AGNs, and find general consistency with both models. However, we find that the L {sub R}/ L {sub X} relation does not distinguish between star formation and non-relativistic AGN-driven outflows as the origin of radio emission in radio-quiet AGNs. Finally, we examine where objects with different radio morphologies fall in relation to the main sequence (MS) of star formation, and conclude that those AGNs that fall below the MS, as X-ray selected AGNs have been found to do, have core-dominated or jet-like 22 GHz morphologies.« less

  17. High Resolution X-ray Spectroscopy and Star Formation: HETG Observations of the Pre-Main Sequence Stellar Cluster IC 348

    NASA Astrophysics Data System (ADS)

    Principe, David; Huenemoerder, David P.; Schulz, Norbert; Kastner, Joel H.; Weintraub, David; Preibisch, Thomas

    2018-01-01

    We present Chandra High Energy Transmission Grating (HETG) observations of the ∼3 Myr old pre-main sequence (pre-MS) stellar cluster IC 348. With 400-500 cluster members at a distance of ∼300 pc, IC 348 is an ideal target to observe a large number of X-ray sources in a single pointing and is thus an extremely efficient use of Chandra-HETG. High resolution X-ray spectroscopy offers a means to investigate detailed spectral characteristic of X-ray emitting plasmas and their surrounding environments. We present preliminary results where we compare X-ray spectral signatures (e.g., luminosity, temperature, column density, abundance) of the X-ray brightest pre-MS stars in IC 348 with spectral type, multiwavelength signatures of accretion, and the presence of circumstellar disks at multiple stages of pre-MS stellar evolution. Assuming all IC 348 members formed from the same primordial molecular cloud, any disparity between coronal abundances of individual members, as constrained by the identification and strength of emission lines, will constrain the source(s) of coronal chemical evolution at a stage of pre-MS evolution vital to the formation of planets.

  18. Radio Properties of the BAT AGNs: the FIR-radio Relation, the Fundamental Plane, and the Main Sequence of Star Formation

    NASA Astrophysics Data System (ADS)

    Smith, Krista Lynne; Mushotzky, Richard F.; Vogel, Stuart; Shimizu, Thomas T.; Miller, Neal

    2016-12-01

    We conducted 22 GHz 1″ JVLA imaging of 70 radio-quiet active galactic nuclei (AGNs) from the Swift-BAT survey. We find radio cores in all but three objects. The radio morphologies of the sample fall into three groups: compact and core-dominated, extended, and jet-like. We spatially decompose each image into core flux and extended flux, and compare the extended radio emission with that predicted from previous Herschel observations using the canonical FIR-radio relation. After removing the AGN contribution to the FIR and radio flux densities, we find that the relation holds remarkably well despite the potentially different star formation physics in the circumnuclear environment. We also compare our core radio flux densities with predictions of coronal models and scale-invariant jet models for the origin of radio emission in radio-quiet AGNs, and find general consistency with both models. However, we find that the L R/L X relation does not distinguish between star formation and non-relativistic AGN-driven outflows as the origin of radio emission in radio-quiet AGNs. Finally, we examine where objects with different radio morphologies fall in relation to the main sequence (MS) of star formation, and conclude that those AGNs that fall below the MS, as X-ray selected AGNs have been found to do, have core-dominated or jet-like 22 GHz morphologies.

  19. Galactic helium-to-metals enrichment ratio (Delta Y/ Delta Z) from the analysis of local main sequence stars observed by HIPPARCOS

    NASA Astrophysics Data System (ADS)

    Gennaro, M.; Prada Moroni, P. G.; Degl'Innocenti, S.

    We discuss the reliability of one of the most used method to determine the Helium-to-metals enrichment ratio, Delta Y / Delta Z, i.e. the photometric comparison of a selected data set of local disk low Main Sequence (MS) stars observed by HIPPARCOS and a new grid of stellar models with up-to-date input physics. Most of the attention has been devoted to evaluate the effects on the final results of different sources of uncertainty (observational errors, evolutionary effects, selection criteria, systematic uncertainties of the models, numerical errors). As a check of the result the procedure has been repeated using another, independent, data set: the low-MS of the Hyades cluster. The obtained of Delta Y/ Delta Z for the Hyades, together with spectroscopic determinations of [Fe/H] ratio, have been used to obtain the Y and Z values for the cluster. Isochrones have been calculated with the estimated chemical composition, obtaining a very good agreement between the predicted position of the Hyades MS and the observational data in the Color - Magnitude Diagram (CMD).

  20. STELLAR BORON ABUNDANCES NEAR THE MAIN-SEQUENCE TURNOFF OF THE OPEN CLUSTER NGC 3293 AND IMPLICATIONS FOR THE EFFICIENCY OF ROTATIONALLY DRIVEN MIXING IN STELLAR ENVELOPES

    SciTech Connect

    Proffitt, Charles R.; Lennon, Daniel J.; Langer, Norbert

    2016-06-10

    Spectra from the Hubble Space Telescope Cosmic Origins Spectrograph and the Space Telescope Imaging Spectrograph covering the B iii resonance line have been obtained for 10 early-B stars near the turnoff of the young Galactic open cluster NGC 3293. This is the first sample of boron abundance determinations in a single, clearly defined population of early-B stars that also covers a substantial range of projected rotational velocities. In most of these stars we detect partial depletion of boron at a level consistent with that expected for rotational mixing in single stars, but inconsistent with expectations for depletion from close binarymore » evolution. However, our results do suggest that the efficiency of rotational mixing is at or slightly below the low end of the range predicted by the available theoretical calculations. The two most luminous targets observed have a very large boron depletion and may be the products of either binary interactions or post-main-sequence evolution.« less

  1. Sequence analysis of the pyruvylated galactan sulfate-derived oligosaccharides by negative-ion electrospray tandem mass spectrometry.

    PubMed

    Li, Na; Mao, Wenjun; Liu, Xue; Wang, Shuyao; Xia, Zheng; Cao, Sujian; Li, Lin; Zhang, Qi; Liu, Shan

    2016-10-04

    Five sulfated oligosaccharide fragments, F1-F5, were prepared from a pyruvylated galactan sulfate from the green alga Codium divaricatum, by partial depolymerization using mild acid hydrolysis and purification with gel-permeation chromatography. Negative-ion electrospray tandem mass spectrometry with collision-induced dissociation (ES-CID-MS/MS) is attempted for sequence determination of the sulfated oligosaccharides. The sequence of F1 with homogeneous disaccharide composition was first characterized to be Galp-(4SO4)-(1 → 3)-Galp by detailed nuclear magnetic resonance spectroscopic analyses. The fragmentation pattern of F1 in the product ion spectra was established on the basis of negative-ion ES-CID MS/MS, which was then applied to sequence analysis of other sulfated oligosaccharides. The sequences of F2 and F3 were deduced to be Galp-(4SO4)-(1 → 3)-Galp-(1 → 3)-Galp-(1 → 3)-Galp and 3,4-O-(1-carboxyethylidene)-Galp-(6SO4)-(1 → 3)-Galp, respectively. The sequences of major fragments in F4 and F5 were also deduced. The investigation demonstrated that negative-ion ES-CID-MS/MS was an efficient method for the sequence analysis of the pyruvylated galactan sulfate-derived oligosaccharides which revealed the patterns of substitution and glycosidic linkages. The pyruvylated galactan sulfate-derived oligosaccharides were novel sulfated oligosaccharides different from other algal polysaccharide-derived oligosaccharides. Copyright © 2016 Elsevier Ltd. All rights reserved.

  2. Characterization and analysis of posttranslational modifications of the human large cytoplasmic ribosomal subunit proteins by mass spectrometry and Edman sequencing.

    PubMed

    Odintsova, Tatyana I; Müller, Eva-Christina; Ivanov, Anton V; Egorov, Tsezi A; Bienert, Ralf; Vladimirov, Serguei N; Kostka, Susanne; Otto, Albrecht; Wittmann-Liebold, Brigitte; Karpova, Galina G

    2003-04-01

    The 60S ribosomal proteins were isolated from ribosomes of human placenta and separated by reversed phase HPLC. The fractions obtained were subjected to trypsin and Glu-C digestion and analyzed by mass fingerprinting (MALDI-TOF), MS/MS (ESI), and Edman sequencing. Forty-six large subunit proteins were found, 22 of which showed masses in accordance with the SwissProt database (June 2002) masses (proteins L6, L7, L9, L13, L15, L17, L18, L21, L22, L24, L26, L27, L30, L32, L34, L35, L36, L37, L37A, L38, L39, L41). Eleven (proteins L7, L10A, L11, L12, L13A, L23, L23A, L27A, L28, L29, and P0) resulted in mass changes that are consistent with N-terminal loss of methionine, acetylation, internal methylation, or hydroxylation. A loss of methionine without acetylation was found for protein L8 and L17. For nine proteins (L3, L4, L5, L7A, L10, L14, L19, L31, and L40), the molecular masses could not be determined. Proteins P1 and protein L3-like were not identified by the methods applied.

  3. Sequencing of T-superfamily conotoxins from Conus virgo: pyroglutamic acid identification and disulfide arrangement by MALDI mass spectrometry.

    PubMed

    Mandal, Amit Kumar; Ramasamy, Mani Ramakrishnan Santhana; Sabareesh, Varatharajan; Openshaw, Matthew E; Krishnan, Kozhalmannom S; Balaram, Padmanabhan

    2007-08-01

    De novo mass spectrometric sequencing of two Conus peptides, Vi1359 and Vi1361, from the vermivorous cone snail Conus virgo, found off the southern Indian coast, is presented. The peptides, whose masses differ only by 2 Da, possess two disulfide bonds and an amidated C-terminus. Simple chemical modifications and enzymatic cleavage coupled with matrix assisted laser desorption ionization (MALDI) mass spectrometric analysis aided in establishing the sequences of Vi1359, ZCCITIPECCRI-NH(2), and Vi1361, ZCCPTMPECCRI-NH(2), which differ only at residues 4 and 6 (Z = pyroglutamic acid). The presence of the pyroglutamyl residue at the N-terminus was unambiguously identified by chemical hydrolysis of the cyclic amide, followed by esterification. The presence of Ile residues in both the peptides was confirmed from high-energy collision induced dissociation (CID) studies, using the observation of w(n)- and d(n)-ions as a diagnostic. Differential cysteine labeling, in conjunction with MALDI-MS/MS, permitted establishment of disulfide connectivity in both peptides as Cys2-Cys9 and Cys3-Cys10. The cysteine pattern clearly reveals that the peptides belong to the class of T-superfamily conotoxins, in particular the T-1 superfamily.

  4. Nutrients and water masses in the Gulf of Maine - Georges Bank region: Variability and importance to blooms of the toxic dinoflagellate Alexandrium fundyense

    PubMed Central

    Townsend, D.W.; McGillicuddy, D.J.; Thomas, M.A.; Rebuck, N.R.

    2015-01-01

    We report here the results of ten oceanographic survey cruises carried out in the Gulf of Maine - Georges Bank region of the Northwest Atlantic during the late spring to summer period in 2007, 2008 and 2010, for which we examine and characterize relationships among dissolved inorganic nutrient fields, water mass dynamics and cell densities of the toxic dinoflagellate Alexandrium fundyense. Nutrients are supplied to continental shelf waters of the Gulf of Maine - Georges Bank region by inflows of deep offshore water masses; once in the Gulf they are transported with the residual circulation and mix with surface waters, both in the Gulf and on the Bank. Those fluxes of offshore water masses and their nutrient loads are the major source of nutrients for phytoplankton production in the region, including annual blooms of A. fundyense in the Gulf and on Georges Bank. This much is already known. We suggest here that the locations and magnitude of A. fundyense blooms are controlled in part by variable nutrient fluxes to the interior Gulf of Maine from offshore, and, those interior Gulf of Maine waters are, in turn, the main nutrient source to Georges Bank, which are brought onto the Bank by tidal pumping on the Northern Flank. We present evidence that nitrate is the initial form of nitrogenous nutrient for A. fundyense blooms, but it is quickly depleted to limiting concentrations of less than 0.5 μM, at which time continued growth and maintenance of the population is likely fueled by recycled ammonium. We also show that phosphate may be the limiting nutrient over much of Georges Bank in summer, allowing recycled ammonium concentrations to increase. Our temperature-salinity analyses reveal spatial and temporal (seasonal and interannual) variability in the relative proportions of two deep source waters that enter the Gulf of Maine at depth through the Northeast Channel: Warm Slope Water (WSW) and Labrador Slope Water (LSW). Those two source waters are known to vary in their

  5. Nutrients and water masses in the Gulf of Maine - Georges Bank region: Variability and importance to blooms of the toxic dinoflagellate Alexandrium fundyense.

    PubMed

    Townsend, D W; McGillicuddy, D J; Thomas, M A; Rebuck, N R

    2014-05-01

    We report here the results of ten oceanographic survey cruises carried out in the Gulf of Maine - Georges Bank region of the Northwest Atlantic during the late spring to summer period in 2007, 2008 and 2010, for which we examine and characterize relationships among dissolved inorganic nutrient fields, water mass dynamics and cell densities of the toxic dinoflagellate Alexandrium fundyense . Nutrients are supplied to continental shelf waters of the Gulf of Maine - Georges Bank region by inflows of deep offshore water masses; once in the Gulf they are transported with the residual circulation and mix with surface waters, both in the Gulf and on the Bank. Those fluxes of offshore water masses and their nutrient loads are the major source of nutrients for phytoplankton production in the region, including annual blooms of A. fundyense in the Gulf and on Georges Bank. This much is already known. We suggest here that the locations and magnitude of A. fundyense blooms are controlled in part by variable nutrient fluxes to the interior Gulf of Maine from offshore, and, those interior Gulf of Maine waters are, in turn, the main nutrient source to Georges Bank, which are brought onto the Bank by tidal pumping on the Northern Flank. We present evidence that nitrate is the initial form of nitrogenous nutrient for A. fundyense blooms, but it is quickly depleted to limiting concentrations of less than 0.5 μM, at which time continued growth and maintenance of the population is likely fueled by recycled ammonium. We also show that phosphate may be the limiting nutrient over much of Georges Bank in summer, allowing recycled ammonium concentrations to increase. Our temperature-salinity analyses reveal spatial and temporal (seasonal and interannual) variability in the relative proportions of two deep source waters that enter the Gulf of Maine at depth through the Northeast Channel: Warm Slope Water (WSW) and Labrador Slope Water (LSW). Those two source waters are known to vary in

  6. A simplified soil extraction sequence to monitor the main and trace element speciation in soil after compost and mineral fertilizer additions upon the composition of wheat grains

    NASA Astrophysics Data System (ADS)

    Sager, Manfred; Erhart, Eva

    2016-04-01

    High quality biological waste treatment aims at producing compost in order to maintain a clean environment and to sustain soil organic carbon levels. Fertilization with compost as a source of organic carbon, nutrients, and accessory elements, as well as fertilization with mineral N- and PK fertilizer have been tested in a field experiment on a calcaric Fluvisol in the Danube wetlands, at 4 levels each. Yields of wheat were recorded, and grains and soils were sampled from each treatment, and analyzed for main and trace element composition. The corresponding soils were characterized by mobile phases, obtained by leaching with 0,16M acetic acid to cover exchangeables plus carbonates, and subsequently by 0,1M oxalate buffer pH 3 to dissolve the pedogenic oxides. Total amounts were obtained from digests with perchloric- nitric-hydrofluoric acid. For quasi-total amounts, aqua regia was replaced by pressure decomposition with KClO3 in dilute nitric acid. The proposed extraction sequence permits to analyze and interpret soil for main elements, trace elements, nutrients and anions simultaneously. Factor analyses of soil extracts obtained from dilute acetic acid revealed Ba-Be-Cd-Cu-Li-S (traces), Ca-Mg-Mn (main carbonates), Al-Fe-B, Y, and P-K (nutrients) as chemically feasible principal components. Subsequent soil extracts from oxalate contained Al-B-Co-K-Na-Pb-Si-V-S (maybe acid silicate weathering), Cr-Li-Ni-Sr-Ti (maybe basic silicate weathering), Be-Cu-Fe-P, Co-Mg-Mn-Zn (Mn-oxides) and Ba-Sc as principal components. Factor analyses of total element data distinguished the principal components Ce-La-Li-Sc-Y-P (rare earths), Al-Ca-Fe-K-Mg-Na-P (main elements), Cd-Co-Cr-Cu-Ni-Zn (trace elements), As-Pb (contaminants), Ba-Mn-Sr, and Ti, which looks chemically feasible also. Factor analyses of those soil fractions which presumably form the main fractions of exchangeables, carbonates, pedogenic oxides and silicates, showed no cross connections, except for P. Oxalate

  7. Detection of Escherichia coli sequence type 131 by matrix-assisted laser desorption ionization time-of-flight mass spectrometry: implications for infection control policies?

    PubMed

    Lafolie, J; Sauget, M; Cabrolier, N; Hocquet, D; Bertrand, X

    2015-07-01

    Sequence type 131 (ST131) is a predominant lineage among extraintestinal pathogenic Escherichia coli. It plays a major role in the worldwide dissemination of extended-spectrum β-lactamase (ESBL)-producing E. coli. The ST131 pandemic is mainly the result of clonal expansion of the single well-adapted subclone H30-Rx, which is acquired in hospitals more frequently than other ESBL-producing E. coli clones. To develop a rapid method using matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) to identify ST131 for infection control purposes. Peak biomarkers of ST131 were identified from the mass spectrum profiles of 109 E. coli isolates (including 50 ST131 isolates). The models accurately identified ST131 isolates from mass spectrum profiles obtained with and without protein extraction. The rapid identification of ST131 isolates with MALDI-TOF MS can be easily implemented in the laboratory, and could help to target infection control measures in patients carrying multi-drug-resistant E. coli that are more likely to spread. Copyright © 2015 The Healthcare Infection Society. Published by Elsevier Ltd. All rights reserved.

  8. Kinematic scaling relations of CALIFA galaxies: A dynamical mass proxy for galaxies across the Hubble sequence.

    NASA Astrophysics Data System (ADS)

    Aquino-Ortíz, E.; Valenzuela, O.; Sánchez, S. F.; Hernández-Toledo, H.; Ávila-Reese, V.; van de Ven, G.; Rodríguez-Puebla, A.; Zhu, L.; Mancillas, B.; Cano-Díaz, M.; García-Benito, R.

    2018-06-01

    We used ionized gas and stellar kinematics for 667 spatially resolved galaxies publicly available from the Calar Alto Legacy Integral Field Area survey (CALIFA) 3rd Data Release with the aim of studying kinematic scaling relations as the Tully & Fisher (TF) relation using rotation velocity, Vrot, the Faber & Jackson (FJ) relation using velocity dispersion, σ, and also a combination of Vrot and σ through the SK parameter defined as SK^2 = KV_{rot}^2 + σ ^2 with constant K. Late-type and early-type galaxies reproduce the TF and FJ relations. Some early-type galaxies also follow the TF relation and some late-type galaxies the FJ relation, but always with larger scatter. On the contrary, when we use the SK parameter, all galaxies, regardless of the morphological type, lie on the same scaling relation, showing a tight correlation with the total stellar mass, M⋆. Indeed, we find that the scatter in this relation is smaller or equal to that of the TF and FJ relations. We explore different values of the K parameter without significant differences (slope and scatter) in our final results with respect the case K = 0.5 besides than a small change in the zero point. We calibrate the kinematic SK^2 dynamical mass proxy in order to make it consistent with sophisticated published dynamical models within 0.15 dex. We show that the SK proxy is able to reproduce the relation between the dynamical mass and the stellar mass in the inner regions of galaxies. Our result may be useful in order to produce fast estimations of the central dynamical mass in galaxies and to study correlations in large galaxy surveys.

  9. Escherichia coli Sequence Type 131 H30 Is the Main Driver of Emerging Extended-Spectrum-β-Lactamase-Producing E. coli at a Tertiary Care Center.

    PubMed

    Johnson, James R; Johnston, Brian; Thuras, Paul; Launer, Bryn; Sokurenko, Evgeni V; Miller, Loren G

    2016-01-01

    The H 30 strain of Escherichia coli sequence type 131 (ST131- H 30) is a recently emerged, globally disseminated lineage associated with fluoroquinolone resistance and, via its H 30Rx subclone, the CTX-M-15 extended-spectrum beta-lactamase (ESBL). Here, we studied the clonal background and resistance characteristics of 109 consecutive recent E. coli clinical isolates (2015) and 41 historical ESBL-producing E. coli blood isolates (2004 to 2011) from a public tertiary care center in California with a rising prevalence of ESBL-producing E. coli isolates. Among the 2015 isolates, ST131, which was represented mainly by ST131- H 30, was the most common clonal lineage (23% overall). ST131- H 30 accounted for 47% (8/17) of ESBL-producing, 47% (14/30) of fluoroquinolone-resistant, and 33% (11/33) of multidrug-resistant isolates. ST131- H 30 also accounted for 53% (8/14) of dually fluoroquinolone-resistant, ESBL-producing isolates, with the remaining 47% comprised of diverse clonal groups that contributed a single isolate each. ST131- H 30Rx, with CTX-M-15, was the major ESBL producer (6/8) among ST131- H 30 isolates. ST131- H 30 and H 30Rx also dominated (46% and 37%, respectively) among the historical ESBL-producing isolates (2004 to 2011), without significant temporal shifts in relative prevalence. Thus, this medical center's recently emerging ESBL-producing E. coli strains, although multiclonal, are dominated by ST131- H 30 and H 30Rx, which are the only clonally expanded fluoroquinolone-resistant, ESBL-producing lineages. Measures to rapidly and effectively detect, treat, and control these highly successful lineages are needed. IMPORTANCE The ever-rising prevalence of resistance to first-line antibiotics among clinical Escherichia coli isolates leads to worse clinical outcomes and higher health care costs, thereby creating a need to discover its basis so that effective interventions can be developed. We found that the H 30 subset within E. coli sequence type 131

  10. The State-of-the-art HST Astro-photometric Analysis of the Core of ω Centauri. III. The Main Sequence's Multiple Populations Galore

    NASA Astrophysics Data System (ADS)

    Bellini, A.; Milone, A. P.; Anderson, J.; Marino, A. F.; Piotto, G.; van der Marel, R. P.; Bedin, L. R.; King, I. R.

    2017-08-01

    We take advantage of the exquisite quality of the Hubble Space Telescope 26-filter astro-photometric catalog of the core of ω Cen presented in the first paper of this series and the empirical differential-reddening correction presented in the second paper in order to distill the main sequence into its constituent populations. To this end, we restrict ourselves to the five most useful filters: the magic “trio” of F275W, F336W, and F438W, along with F606W and F814W. We develop a strategy for identifying color systems where different populations stand out most distinctly, then we isolate those populations and examine them in other filters where their subpopulations also come to light. In this way, we have identified at least 15 subpopulations, each of which has a distinctive fiducial curve through our five-dimensional photometric space. We confirm the MSa to be split into two subcomponents, and find that both the bMS and the rMS are split into three subcomponents. Moreover, we have discovered two additional MS groups: the MSd (which has three subcomponents) shares similar properties with the bMS, and the MSe (which has four subcomponents) has properties more similar to those of the rMS. We examine the fiducial curves together and use synthetic spectra to infer relative heavy-element, light-element, and helium abundances for the populations. Our findings show that the stellar populations and star formation history of ω Cen are even more complex than inferred previously. Finally, we provide as a supplement to the original catalog a list that identifies for each star which population it is most likely associated with. Based on archival observations with the NASA/ESA Hubble Space Telescope, obtained at the Space Telescope Science Institute, which is operated by AURA, Inc., under NASA contract NAS 5-26555.

  11. Theory and evidence of global Rossby waves in upper main-sequence stars: r-mode oscillations in many Kepler stars

    NASA Astrophysics Data System (ADS)

    Saio, Hideyuki; Kurtz, Donald W.; Murphy, Simon J.; Antoci, Victoria L.; Lee, Umin

    2018-02-01

    Asteroseismic inference from pressure modes (p modes) and buoyancy, or gravity, modes (g modes) is ubiquitous for stars across the Hertzsprung-Russell diagram. Until now, however, discussion of r modes (global Rossby waves) has been rare. Here we derive the expected frequency ranges of r modes in the observational frame by considering the visibility of these modes. We find that the frequencies of r modes of azimuthal order m appear as groups at slightly lower frequency than m times the rotation frequency. Comparing the visibility curves for r modes with Fourier amplitude spectra of Kepler light curves of upper main-sequence B, A, and F stars, we find that r modes are present in many γ Dor stars (as first discovered by Van Reeth et al.), spotted stars, and so-called heartbeat stars, which are highly eccentric binary stars. We also find a signature of r modes in a frequently bursting Be star observed by Kepler. In the amplitude spectra of moderately to rapidly rotating γ Dor stars, r-mode frequency groups appear at lower frequency than prograde g-mode frequency groups, while in the amplitude spectra of spotted early A to B stars, groups of symmetric (with respect to the equator) r-mode frequencies appear just below the frequency of a structured peak that we suggest represents an approximate stellar rotation rate. In many heartbeat stars, a group of frequencies can be fitted with symmetric m = 1 r modes, which can be used to obtain rotation frequencies of these stars.

  12. The State-of-the-art HST Astro-photometric Analysis of the Core of ω Centauri. III. The Main Sequence's Multiple Populations Galore

    SciTech Connect

    Bellini, A.; Anderson, J.; Van der Marel, R. P.

    We take advantage of the exquisite quality of the Hubble Space Telescope 26-filter astro-photometric catalog of the core of ω Cen presented in the first paper of this series and the empirical differential-reddening correction presented in the second paper in order to distill the main sequence into its constituent populations. To this end, we restrict ourselves to the five most useful filters: the magic “trio” of F275W, F336W, and F438W, along with F606W and F814W. We develop a strategy for identifying color systems where different populations stand out most distinctly, then we isolate those populations and examine them in othermore » filters where their subpopulations also come to light. In this way, we have identified at least 15 subpopulations, each of which has a distinctive fiducial curve through our five-dimensional photometric space. We confirm the MSa to be split into two subcomponents, and find that both the bMS and the rMS are split into three subcomponents. Moreover, we have discovered two additional MS groups: the MSd (which has three subcomponents) shares similar properties with the bMS, and the MSe (which has four subcomponents) has properties more similar to those of the rMS. We examine the fiducial curves together and use synthetic spectra to infer relative heavy-element, light-element, and helium abundances for the populations. Our findings show that the stellar populations and star formation history of ω Cen are even more complex than inferred previously. Finally, we provide as a supplement to the original catalog a list that identifies for each star which population it is most likely associated with.« less

  13. A Constraint on the Formation Timescale of the Young Open Cluster NGC 2264: Lithium Abundance of Pre-main Sequence Stars

    NASA Astrophysics Data System (ADS)

    Lim, Beomdu; Sung, Hwankyung; Kim, Jinyoung S.; Bessell, Michael S.; Hwang, Narae; Park, Byeong-Gon

    2016-11-01

    The timescale of cluster formation is an essential parameter in order to understand the formation process of star clusters. Pre-main sequence (PMS) stars in nearby young open clusters reveal a large spread in brightness. If the spread were considered to be a result of a real spread in age, the corresponding cluster formation timescale would be about 5-20 Myr. Hence it could be interpreted that star formation in an open cluster is prolonged for up to a few tens of Myr. However, difficulties in reddening correction, observational errors, and systematic uncertainties introduced by imperfect evolutionary models for PMS stars can result in an artificial age spread. Alternatively, we can utilize Li abundance as a relative age indicator of PMS star to determine the cluster formation timescale. The optical spectra of 134 PMS stars in NGC 2264 have been obtained with MMT/Hectochelle. The equivalent widths have been measured for 86 PMS stars with a detectable Li line (3500\\lt {T}{eff}[{{K}}]≤slant 6500). Li abundance under the condition of local thermodynamic equilibrium (LTE) was derived using the conventional curve of growth method. After correction for non-LTE effects, we find that the initial Li abundance of NGC 2264 is A({Li})=3.2+/- 0.2. From the distribution of the Li abundances, the underlying age spread of the visible PMS stars is estimated to be about 3-4 Myr and this, together with the presence of embedded populations in NGC 2264, suggests that the cluster formed on a timescale shorter than 5 Myr.

  14. Uplift Sequence of the Main Morphoestructural Units of the South Central Andes at 30°S: Insights from a Multidisciplinary Approach

    NASA Astrophysics Data System (ADS)

    Lossada, A. C.; Mardónez, D.; Suriano, J.; Hoke, G. D.; Fitzgerald, P. G.; Mahoney, J. B.; Giambiagi, L.; Aragon, E.

    2015-12-01

    The South Central Andes at 30°S represent a key area to understand the Andes geodynamics as it corresponds to the flat slab segment, characterized by a subhorizontal subduction angle, absence of Neogene magmatism and a highly compressive tectonic regime. Under these settings, crustal shortening is believed to be the principal mechanism responsible for the rise of the Andes. However, the sequence of uplift of the different morphoestructural units composing the orogen is not fully understood; neither do the location and time of activity of intracrustal detachments and their connection with shallower structures. We attempt to develop a multidisciplinary analysis that allow us to characterize the timing, magnitude and activity of the principal structures involved in the construction of the Andes at 30°S trough the Coastal Range, the Frontal Cordillera and the Precordillera. The main phase of deformation in the Coastal Range occurred between 60 and 40Ma, based on published thermochronological and structural data. Our structural analyses constrain the Frontal Cordillera uplift between 18 and 13Ma. In the Precordillera area, in turn, we carried out structural, sedimentological and U-Pb provenience studies. Provenience studies and the 12 and 9Ma ages obtained for the youngest zircons indicated that the main thrusts uplifting the western sector of the Precordillera thrust system were activated since 13Ma at this latitude, and not before that time as it was previously suggested. In order to better constrain the exhumation and thermal history of Frontal Cordillera, a thermochronological study is being conducted. Twenty samples for apatite fission tracks (AFT) and apatite (U-Th)/He (AHe) were collected from two vertical profiles located at western sector (Guanta granitoid) and eastern sector (Colanguil granitoid) of the Frontal Cordillera system. Samples are currently being processed, and they are partially reseted, which will allow us to obtain a cooling age. The aim is to

  15. Complete Genome Sequence of a Common Midwife Toad Virus-Like Ranavirus Associated with Mass Mortalities in Wild Amphibians in the Netherlands

    PubMed Central

    Hughes, Joseph; Saucedo, Bernardo; Rijks, Jolianne; Kik, Marja; Haenen, Olga L. M.; Engelsma, Marc Y.; Gröne, Andrea; Verheije, M. Helene; Wilkie, Gavin

    2014-01-01

    A ranavirus associated with mass mortalities in wild water frogs (Pelophylax spp.) and other amphibians in the Netherlands since 2010 was isolated, and its complete genome sequence was determined. The virus has a genome of 107,772 bp and shows 96.5% sequence identity with the common midwife toad virus from Spain. PMID:25540340

  16. Hot ammonia around young O-type stars. III. High-mass star formation and hot core activity in W51 Main

    NASA Astrophysics Data System (ADS)

    Goddi, C.; Ginsburg, A.; Zhang, Q.

    2016-05-01

    Context. This paper is the third in a series of NH3 multilevel imaging studies in well-known, high-mass star-forming regions. The main goal is to characterize kinematics and physical conditions of (hot and dense) circumstellar molecular gas around O-type young stars. Aims: We want to map at subarcsecond resolution highly excited inversion lines of NH3 in the high-mass star-forming region W51 Main (distance = 5.4 kpc), which is an ideal target to constrain theoretical models of high-mass star formation. Methods: Using the Karl Jansky Very Large Array (JVLA), we mapped the hot and dense molecular gas in W51 Main with ~0.2 arcsec-0.3 arcsec angular resolution in five metastable (J = K) inversion transitions of ammonia (NH3): (J,K) = (6, 6), (7, 7), (9, 9), (10, 10), and (13, 13). These lines arise from energy levels between ~400 K and ~1700 K above the ground state. We also made maps of the (free-free) continuum emission at frequencies between 25 and 36 GHz. Results: We have identified and characterized two main centers of high-mass star formation in W51 Main, which excite hot cores and host one or multiple high-mass young stellar objects (YSOs) at their centers: the W51e2 complex and the W51e8 core (~6'' southward of W51e2). The former breaks down into three further subcores: W51e2-W, which surrounds the well-known hypercompact (HC) HII region, where hot NH3 is observed in absorption, and two additional dusty cores, W51e2-E (~0.8 arcsec to the East) and W51e2-NW (~1'' to the North), where hot NH3 is observed in emission. The velocity maps toward the HC HII region show a clear velocity gradient along the east-west in all lines. The gradient may indicate rotation, although any Keplerian motion must be on smaller scales (<1000 AU) as we do not directly observe a Keplerian velocity profile. The absence of outflow and/or maser activity and the low amount of molecular gas available for accretion (~5 M⊙, assuming [NH3]/[H2] = 10-7) with respect to the mass of the central

  17. Application of Tandem Two-Dimensional Mass Spectrometry for Top-Down Deep Sequencing of Calmodulin

    NASA Astrophysics Data System (ADS)

    Floris, Federico; Chiron, Lionel; Lynch, Alice M.; Barrow, Mark P.; Delsuc, Marc-André; O'Connor, Peter B.

    2018-06-01

    Two-dimensional mass spectrometry (2DMS) involves simultaneous acquisition of the fragmentation patterns of all the analytes in a mixture by correlating their precursor and fragment ions by modulating precursor ions systematically through a fragmentation zone. Tandem two-dimensional mass spectrometry (MS/2DMS) unites the ultra-high accuracy of Fourier transform ion cyclotron resonance (FT-ICR) MS/MS and the simultaneous data-independent fragmentation of 2DMS to achieve extensive inter-residue fragmentation of entire proteins. 2DMS was recently developed for top-down proteomics (TDP), and applied to the analysis of calmodulin (CaM), reporting a cleavage coverage of about 23% using infrared multiphoton dissociation (IRMPD) as fragmentation technique. The goal of this work is to expand the utility of top-down protein analysis using MS/2DMS in order to extend the cleavage coverage in top-down proteomics further into the interior regions of the protein. In this case, using MS/2DMS, the cleavage coverage of CaM increased from 23% to 42%.

  18. Star Formation in Galaxies at z ˜ 4-5 from the SMUVS Survey: A Clear Starburst/Main-sequence Bimodality for Hα Emitters on the SFR-M* Plane

    NASA Astrophysics Data System (ADS)

    Caputi, K. I.; Deshmukh, S.; Ashby, M. L. N.; Cowley, W. I.; Bisigello, L.; Fazio, G. G.; Fynbo, J. P. U.; Le Fèvre, O.; Milvang-Jensen, B.; Ilbert, O.

    2017-11-01

    We study a large galaxy sample from the Spitzer Matching Survey of the UltraVISTA ultra-deep Stripes (SMUVS) to search for sources with enhanced 3.6 μ {{m}} fluxes indicative of strong Hα emission at z=3.9{--}4.9. We find that the percentage of “Hα excess” sources reaches 37%-40% for galaxies with stellar masses {{log}}10({M}* /{M}⊙ )≈ 9{--}10 and decreases to < 20 % at {{log}}10({M}* /{M}⊙ )˜ 10.7. At higher stellar masses, however, the trend reverses, although this is likely due to active galactic nucleus contamination. We derive star formation rates (SFR) and specific SFR (sSFR) from the inferred Hα equivalent widths of our “Hα excess” galaxies. We show, for the first time, that the “Hα excess” galaxies clearly have a bimodal distribution on the SFR-M* plane: they lie on the main sequence of star formation (with {{log}}10({sSFR}/{{yr}}-1)< -8.05) or in a starburst cloud (with {{log}}10({sSFR}/{{yr}}-1)> -7.60). The latter contains ˜ 15 % of all the objects in our sample and accounts for > 50 % of the cosmic SFR density at z=3.9{--}4.9, for which we derive a robust lower limit of 0.066 {M}⊙ {{yr}}-1 {{Mpc}}-3. Finally, we identify an unusual > 50σ overdensity of z=3.9{--}4.9 galaxies within a 0.20× 0.20 arcmin2 region. We conclude that the SMUVS unique combination of area and depth at mid-IR wavelengths provides an unprecedented level of statistics and dynamic range that are fundamental to revealing new aspects of galaxy evolution in the young universe.

  19. A simple protocol for combinatorial cyclic depsipeptide libraries sequencing by matrix-assisted laser desorption/ionisation mass spectrometry.

    PubMed

    Gurevich-Messina, Juan M; Giudicessi, Silvana L; Martínez-Ceron, María C; Acosta, Gerardo; Erra-Balsells, Rosa; Cascone, Osvaldo; Albericio, Fernando; Camperi, Silvia A

    2015-01-01

    Short cyclic peptides have a great interest in therapeutic, diagnostic and affinity chromatography applications. The screening of 'one-bead-one-peptide' combinatorial libraries combined with mass spectrometry (MS) is an excellent tool to find peptides with affinity for any target protein. The fragmentation patterns of cyclic peptides are quite more complex than those of their linear counterparts, and the elucidation of the resulting tandem mass spectra is rather more difficult. Here, we propose a simple protocol for combinatorial cyclic libraries synthesis and ring opening before MS analysis. In this strategy, 4-hydroxymethylbenzoic acid, which forms a benzyl ester with the first amino acid, was used as the linker. A glycolamidic ester group was incorporated after the combinatorial positions by adding glycolic acid. The library synthesis protocol consisted in the following: (i) incorporation of Fmoc-Asp[2-phenylisopropyl (OPp)]-OH to Ala-Gly-oxymethylbenzamide-ChemMatrix, (ii) synthesis of the combinatorial library, (iii) assembly of a glycolic acid, (iv) couple of an Ala residue in the N-terminal, (v) removal of OPp, (vi) peptide cyclisation through side chain Asp and N-Ala amino terminus and (vii) removal of side chain protecting groups. In order to simultaneously open the ring and release each peptide, benzyl and glycolamidic esters were cleaved with ammonia. Peptide sequences could be deduced from the tandem mass spectra of each single bead evaluated. The strategy herein proposed is suitable for the preparation of one-bead-one-cyclic depsipeptide libraries that can be easily open for its sequencing by matrix-assisted laser desorption/ionisation MS. It employs techniques and reagents frequently used in a broad range of laboratories without special expertise in organic synthesis. Copyright © 2014 European Peptide Society and John Wiley & Sons, Ltd.

  20. Evaluation of two main RNA-seq approaches for gene quantification in clinical RNA sequencing: polyA+ selection versus rRNA depletion.

    PubMed

    Zhao, Shanrong; Zhang, Ying; Gamini, Ramya; Zhang, Baohong; von Schack, David

    2018-03-19

    To allow efficient transcript/gene detection, highly abundant ribosomal RNAs (rRNA) are generally removed from total RNA either by positive polyA+ selection or by rRNA depletion (negative selection) before sequencing. Comparisons between the two methods have been carried out by various groups, but the assessments have relied largely on non-clinical samples. In this study, we evaluated these two RNA sequencing approaches using human blood and colon tissue samples. Our analyses showed that rRNA depletion captured more unique transcriptome features, whereas polyA+ selection outperformed rRNA depletion with higher exonic coverage and better accuracy of gene quantification. For blood- and colon-derived RNAs, we found that 220% and 50% more reads, respectively, would have to be sequenced to achieve the same level of exonic coverage in the rRNA depletion method compared with the polyA+ selection method. Therefore, in most cases we strongly recommend polyA+ selection over rRNA depletion for gene quantification in clinical RNA sequencing. Our evaluation revealed that a small number of lncRNAs and small RNAs made up a large fraction of the reads in the rRNA depletion RNA sequencing data. Thus, we recommend that these RNAs are specifically depleted to improve the sequencing depth of the remaining RNAs.

  1. Mass

    SciTech Connect

    Quigg, Chris

    2007-12-05

    In the classical physics we inherited from Isaac Newton, mass does not arise, it simply is. The mass of a classical object is the sum of the masses of its parts. Albert Einstein showed that the mass of a body is a measure of its energy content, inviting us to consider the origins of mass. The protons we accelerate at Fermilab are prime examples of Einsteinian matter: nearly all of their mass arises from stored energy. Missing mass led to the discovery of the noble gases, and a new form of missing mass leads us to the notion of darkmore » matter. Starting with a brief guided tour of the meanings of mass, the colloquium will explore the multiple origins of mass. We will see how far we have come toward understanding mass, and survey the issues that guide our research today.« less

  2. Peptides Labeled with Pyridinium Salts for Sensitive Detection and Sequencing by Electrospray Tandem Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Waliczek, Mateusz; Kijewska, Monika; Rudowska, Magdalena; Setner, Bartosz; Stefanowicz, Piotr; Szewczuk, Zbigniew

    2016-11-01

    Mass spectrometric analysis of trace amounts of peptides may be problematic due to the insufficient ionization efficiency resulting in limited sensitivity. One of the possible ways to overcome this problem is the application of ionization enhancers. Herein we developed new ionization markers based on 2,4,6-triphenylpyridinium and 2,4,6-trimethylpyridinium salts. Using of inexpensive and commercially available pyrylium salt allows selective derivatization of primary amino groups, especially those sterically unhindered, such as ɛ-amino group of lysine. The 2,4,6-triphenylpyridinium modified peptides generate in MS/MS experiments an abundant protonated 2,4,6-triphenylpyridinium ion. This fragment is a promising reporter ion for the multiple reactions monitoring (MRM) analysis. In addition, the fixed positive charge of the pyridinium group enhances the ionization efficiency. Other advantages of the proposed ionization enhancers are the simplicity of derivatization of peptides and the possibility of convenient incorporation of isotopic labels into derivatized peptides.

  3. Top-down mass spectrometry reveals new sequence variants of the major bovine seminal plasma protein PDC-109.

    PubMed

    Laitaoja, Mikko; Sankhala, Rajeshwer S; Swamy, Musti J; Jänis, Janne

    2012-07-01

    The major protein of bovine seminal plasma, PDC-109, is a 109-residue polypeptide that exists as a polydisperse aggregate under native conditions. The oligomeric state of this aggregate varies with ionic strength and the presence of lipids. Binding of PDC-109 to choline phospholipids on the sperm plasma membrane results in an efflux of cholesterol and choline phospholipids, which is an important step in sperm capacitation. In this study, Fourier transform ion cyclotron resonance mass spectrometry was used to analyze PDC-109 purified from bovine seminal plasma. In addition to the previously known PDC-109 variants, four new sequence variants were identified by top-down mass spectrometry. For example, a protein variant containing point mutations P10L and G14R was identified along with another form having a 14-residue truncation in the N-terminal region. Two other minor variants could also be identified from the affinity-purified PDC-109. These results demonstrate that PDC-109 is naturally produced as a mixture of several protein forms, most of which have not been detected in previous studies. Native mass spectrometry revealed that PDC-109 is exclusively monomeric at low protein concentrations, suggesting that the protein oligomers are weakly bound and can easily be disrupted. Ligand binding to PDC-109 was also investigated, and it was observed that two molecules of O-phosphorylcholine bind to each PDC-109 monomer, consistent with previous reports. Copyright © 2012 John Wiley & Sons, Ltd.

  4. Pseudo-Random Sequence Modifications for Ion Mobility Orthogonal Time of Flight Mass Spectrometry

    PubMed Central

    Clowers, Brian H.; Belov, Mikhail E.; Prior, David C.; Danielson, William F.; Ibrahim, Yehia; Smith, Richard D.

    2008-01-01

    Due to the inherently low duty cycle of ion mobility spectrometry (IMS) experiments that sample from continuous ion sources, a range of experimental advances have been developed to maximize ion utilization efficiency. The use of ion trapping mechanisms prior to the ion mobility drift tube has demonstrated significant gains over discrete sampling from continuous sources; however, these technologies have traditionally relied upon a signal averaging to attain analytically relevant signal-to-noise ratios (SNR). Multiplexed (MP) techniques based upon the Hadamard transform offer an alternative experimental approach by which ion utilization efficiency can be elevated to ∼ 50 %. Recently, our research group demonstrated a unique multiplexed ion mobility time-of-flight (MP-IMS-TOF) approach that incorporates ion trapping and can extend ion utilization efficiency beyond 50 %. However, the spectral reconstruction of the multiplexed signal using this experiment approach requires the use of sample-specific weighing designs. Though general weighing designs have been shown to significantly enhance ion utilization efficiency using this MP technique, such weighing designs cannot be applied to all samples. By modifying both the ion funnel trap and the pseudo random sequence (PRS) used for the MP experiment we have eliminated the need for complex weighing matrices. For both simple and complex mixtures SNR enhancements of up to 13 were routinely observed as compared to the SA-IMS-TOF experiment. In addition, this new class of PRS provides a two fold enhancement in ion throughput compared to the traditional HT-IMS experiment. PMID:18311942

  5. Rock Mass Grouting in the Løren Tunnel: Case Study with the Main Focus on the Groutability and Feasibility of Drill Parameter Interpretation

    NASA Astrophysics Data System (ADS)

    Høien, Are Håvard; Nilsen, Bjørn

    2014-05-01

    The Løren road tunnel is a part of a major project at Ring road 3 in Oslo, Norway. The rock part of the tunnel is 915 m long and has two tubes with three lanes and breakdown lanes. Strict water ingress restriction was specified and continuous rock mass grouting was, therefore, carried out for the entire tunnel, which was excavated in folded Cambro-Silurian shales intruded by numerous dykes. This paper describes the rock mass grouting that was carried out for the Løren tunnel. Particular emphasis is placed on discussing grout consumption and the challenges that were encountered when passing under a distinct rock depression. Measurement while drilling (MWD) technology was used for this project, and, in this paper, the relationships between the drill parameter interpretation (DPI) factors water and fracturing are examined in relation to grout volumes. A lowering of the groundwater table was experienced during excavation under the rock depression, but the groundwater was nearly re-established after completion of the main construction work. A planned 80-m watertight concrete lining was not required to be built due to the excellent results from grouting in the rock depression area. A relationship was found between leakages mapped in the tunnel and the DPI water factor, indicating that water is actually present where the DPI water factor shows water in the rock. It is concluded that, for the Løren tunnel, careful planning and high-quality execution of the rock mass grouting made the measured water ingress meet the restrictions. For future projects, the DPI water factor may be used to give a better understanding of the material in which the rock mass grouting is performed and may also be used to reduce the time spent and volumes used when grouting.

  6. Comparative analysis of the main bioactive components of Xin-Sheng-Hua granule and its single herbs by ultrahigh performance liquid chromatography with tandem mass spectrometry.

    PubMed

    Pang, Hanqing; Wang, Jun; Tang, Yuping; Xu, Huiqin; Wu, Liang; Jin, Yi; Zhu, Zhenhua; Guo, Sheng; Shi, Xuqin; Huang, Shengliang; Sun, Dazheng; Duan, Jin-Ao

    2016-11-01

    Xin-Sheng-Hua granule, a representative formula for postpartum hemorrhage, has been used clinically to treat postpartum diseases. Its main bioactive components comprise aromatic acids, phthalides, alkaloids, flavonoids, and gingerols among others. To investigate the changes in main bioactive constituents in its seven single herbs before and after compatibility, a rapid, simple, and sensitive method was developed for comparative analysis of 27 main bioactive components by using ultrahigh-performance liquid chromatography with triple quadrupole electrospray tandem mass spectrometry for the first time. The sufficient separation of 27 target constituents was achieved on a Thermo Scientific Hypersil GOLD column (100 mm × 3 mm, 1.9 μm) within 20 min under the optimized chromatographic conditions. Compared with the theoretical content, the observed content of each analyte showed remarkable differences in Xin-Sheng-Hua granule except thymine, p-coumaric acid, senkyunolide I, senkyunolide H, and ligustilide; the total contents of 27 components increased significantly, and the content variation degrees for the different components were gingerols > flavonoids > aromatic acids > alkaloids > phthalides. The results could provide a good reference for the quality control of Xin-Sheng-Hua granule and might be helpful to interpret the drug interactions based on variation of bioactive components in formulae. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  7. Complete and Draft Genome Sequences of Nine Lactobacillus sakei Strains Selected from the Three Known Phylogenetic Lineages and Their Main Clonal Complexes.

    PubMed

    Loux, Valentin; Coeuret, Gwendoline; Zagorec, Monique; Champomier Vergès, Marie-Christine; Chaillou, Stéphane

    2018-04-19

    We present here the complete and draft genome sequences of nine Lactobacillus sakei strains, selected from the entire range of clonal complexes from the three known lineages of the species. The strains were chosen to provide a wide view of pangenomic and plasmidic diversity for this important foodborne species. Copyright © 2018 Loux et al.

  8. A Test of Pre-Main-Sequence Evolutionary Models across the Stellar/Substellar Boundary Based on Spectra of the Young Quadruple GG Tauri

    NASA Astrophysics Data System (ADS)

    White, Russel J.; Ghez, A. M.; Reid, I. Neill; Schultz, Greg

    1999-08-01

    We present spatially separated optical spectra of the components of the young hierarchical quadruple GG Tau. Spectra of GG Tau Aa and Ab (separation 0.25"~35 AU) were obtained with the Faint Object Spectrograph on board the Hubble Space Telescope. Spectra of GG Tau Ba and Bb (separation 1.48"~207 AU) were obtained with both the HIRES and the LRIS spectrographs on the W. M. Keck telescopes. The components of this minicluster, which span a wide range in spectral type (K7-M7), are used to test both evolutionary models and the temperature scale for very young, low-mass stars under the assumption of coeval formation. Of the evolutionary models tested, those of Baraffe et al. yield the most consistent ages when combined with a temperature scale intermediate between that of dwarfs and giants. The version of the Baraffe et al. models computed with a mixing length nearly twice the pressure scale height is of particular interest, as it predicts masses for GG Tau Aa and Ab that are in agreement with their dynamical mass estimate. Using this evolutionary model and a coeval (at 1.5 Myr) temperature scale, we find that the coldest component of the GG Tau system, GG Tau Bb, is substellar with a mass of 0.044+/-0.006 Msolar. This brown dwarf companion is especially intriguing as it shows signatures of accretion, although this accretion is not likely to alter its mass significantly. GG Tau Bb is currently the lowest mass, spectroscopically confirmed companion to a T Tauri star, and is one of the coldest, lowest mass T Tauri objects in the Taurus-Auriga star-forming region. Based partly on observations with the NASA/ESA Hubble Space Telescope, obtained at the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS5-26555.

  9. "De-novo" amino acid sequence elucidation of protein G'e by combined "top-down" and "bottom-up" mass spectrometry.

    PubMed

    Yefremova, Yelena; Al-Majdoub, Mahmoud; Opuni, Kwabena F M; Koy, Cornelia; Cui, Weidong; Yan, Yuetian; Gross, Michael L; Glocker, Michael O

    2015-03-01

    Mass spectrometric de-novo sequencing was applied to review the amino acid sequence of a commercially available recombinant protein G´ with great scientific and economic importance. Substantial deviations to the published amino acid sequence (Uniprot Q54181) were found by the presence of 46 additional amino acids at the N-terminus, including a so-called "His-tag" as well as an N-terminal partial α-N-gluconoylation and α-N-phosphogluconoylation, respectively. The unexpected amino acid sequence of the commercial protein G' comprised 241 amino acids and resulted in a molecular mass of 25,998.9 ± 0.2 Da for the unmodified protein. Due to the higher mass that is caused by its extended amino acid sequence compared with the original protein G' (185 amino acids), we named this protein "protein G'e." By means of mass spectrometric peptide mapping, the suggested amino acid sequence, as well as the N-terminal partial α-N-gluconoylations, was confirmed with 100% sequence coverage. After the protein G'e sequence was determined, we were able to determine the expression vector pET-28b from Novagen with the Xho I restriction enzyme cleavage site as the best option that was used for cloning and expressing the recombinant protein G'e in E. coli. A dissociation constant (K(d)) value of 9.4 nM for protein G'e was determined thermophoretically, showing that the N-terminal flanking sequence extension did not cause significant changes in the binding affinity to immunoglobulins.

  10. Main differences between volatiles of sparkling and base wines accessed through comprehensive two dimensional gas chromatography with time-of-flight mass spectrometric detection and chemometric tools.

    PubMed

    Welke, Juliane Elisa; Zanus, Mauro; Lazzarotto, Marcelo; Pulgati, Fernando Hepp; Zini, Cláudia Alcaraz

    2014-12-01

    The main changes in the volatile profile of base wines and their corresponding sparkling wines produced by traditional method were evaluated and investigated for the first time using headspace solid-phase microextraction combined with comprehensive two-dimensional gas chromatography with time-of-flight mass spectrometry detection (GC×GC/TOFMS) and chemometric tools. Fisher ratios helped to find the 119 analytes that were responsible for the main differences between base and sparkling wines and principal component analysis explained 93.1% of the total variance related to the selected 78 compounds. It was also possible to observe five subclusters in base wines and four subclusters in sparkling wines samples through hierarchical cluster analysis, which seemed to have an organised distribution according to the regions where the wines came from. Twenty of the most important volatile compounds co-eluted with other components and separation of some of them was possible due to GC×GC/TOFMS performance. Copyright © 2014. Published by Elsevier Ltd.

  11. Sequencing of mitochondrial genomes of nine Aspergillus and Penicillium species identifies mobile introns and accessory genes as main sources of genome size variability.

    PubMed

    Joardar, Vinita; Abrams, Natalie F; Hostetler, Jessica; Paukstelis, Paul J; Pakala, Suchitra; Pakala, Suman B; Zafar, Nikhat; Abolude, Olukemi O; Payne, Gary; Andrianopoulos, Alex; Denning, David W; Nierman, William C

    2012-12-12

    The genera Aspergillus and Penicillium include some of the most beneficial as well as the most harmful fungal species such as the penicillin-producer Penicillium chrysogenum and the human pathogen Aspergillus fumigatus, respectively. Their mitochondrial genomic sequences may hold vital clues into the mechanisms of their evolution, population genetics, and biology, yet only a handful of these genomes have been fully sequenced and annotated. Here we report the complete sequence and annotation of the mitochondrial genomes of six Aspergillus and three Penicillium species: A. fumigatus, A. clavatus, A. oryzae, A. flavus, Neosartorya fischeri (A. fischerianus), A. terreus, P. chrysogenum, P. marneffei, and Talaromyces stipitatus (P. stipitatum). The accompanying comparative analysis of these and related publicly available mitochondrial genomes reveals wide variation in size (25-36 Kb) among these closely related fungi. The sources of genome expansion include group I introns and accessory genes encoding putative homing endonucleases, DNA and RNA polymerases (presumed to be of plasmid origin) and hypothetical proteins. The two smallest sequenced genomes (A. terreus and P. chrysogenum) do not contain introns in protein-coding genes, whereas the largest genome (T. stipitatus), contains a total of eleven introns. All of the sequenced genomes have a group I intron in the large ribosomal subunit RNA gene, suggesting that this intron is fixed in these species. Subsequent analysis of several A. fumigatus strains showed low intraspecies variation. This study also includes a phylogenetic analysis based on 14 concatenated core mitochondrial proteins. The phylogenetic tree has a different topology from published multilocus trees, highlighting the challenges still facing the Aspergillus systematics. The study expands the genomic resources available to fungal biologists by providing mitochondrial genomes with consistent annotations for future genetic, evolutionary and population

  12. The optical + infrared L dwarf spectral sequence of young planetary-mass objects in the Upper Scorpius association

    NASA Astrophysics Data System (ADS)

    Lodieu, N.; Zapatero Osorio, M. R.; Béjar, V. J. S.; Peña Ramírez, K.

    2018-01-01

    We present the results of photometric and spectroscopic follow-ups of the lowest mass member candidates in the nearest OB association, Upper Scorpius (∼5-10 Myr; 145 ± 17 pc), with the Gran Telescopio de Canarias (GTC) and European Southern Observatory (ESO) Very Large Telescope (VLT). We confirm the membership of the large majority (>80 per cent) of candidates originally selected photometrically and astrometrically based on their spectroscopic features, weak equivalent widths of gravity-sensitive doublets and radial velocities. Confirmed members follow a sequence over a wide magnitude range (J = 17.0-19.3 mag) in several colour-magnitude diagrams with optical, near- and mid-infrared photometry and have near-infrared spectral types in the L1-L7 interval with likely masses below 15 Jupiter masses. We find that optical spectral types tend to be earlier than near-infrared spectral types by a few subclasses for spectral types later than M9. We investigate the behaviour of spectral indices, defined in the literature as a function of spectral type and gravity, by comparison with values reported in the literature for young and old dwarfs. We also derive effective temperatures in the 1900-1600 K range from fits of synthetic model-atmosphere spectra to the observed photometry, but we caution that the procedure carries large uncertainties. We determine bolometric corrections for young L dwarfs with ages of ∼5-10 Myr (Upper Sco association) and find them to be similar in the J band but larger by 0.1-0.4 mag in the K band with respect to field L dwarfs. Finally, we discover two faint young L dwarfs, Visible and Infrared Survey Telescope for Astronomy (VISTA) J1607-2146 (L4.5) and VISTA J1611-2215 (L5), that have Hα emission and possible flux excesses at 4.5 μm, pointing to the presence of accretion from a disc on to the central objects of mass below ∼15MJup at an age of 5-10 Myr.

  13. A deep x-ray survey of the Pleiades cluster and the B6-A3 main sequence stars in Orion

    NASA Technical Reports Server (NTRS)

    Caillault, Jean-Pierre

    1993-01-01

    We have obtained deep ROSAT images of three regions within the Pleiades open cluster. We have detected 317 X-ray sources in these ROSAT PSPC images, 171 of which we associate with certain probable members of the Pleiades cluster. We detect nearly all Pleiades members with spectral types later than G0 and within 25 arcminutes of our three field centers where our sensitivity is highest. This has allowed us to derive for the first time the luminosity function for the G, K, and M dwarfs of an open cluster without the need to use statistical techniques to account for the presence of upper limits in the data sample. Because of our high X-ray detection frequency down to the faint limit of the optical catalog, we suspect that some of our unidentified X-ray sources are previously unknown, very low-mass members of the Pleiades. A large fraction of the Pleiades members detected with ROSAT have published rotational velocities. Plots of L(sub x)/L(sub bol) versus spectroscopic rotational velocity show tightly correlated 'saturation' type relations for stars with (B - V)(sub O) greater than 0.60. For each of several color ranges, X-ray luminosities rise rapidly with increasing rotation rate until v sin i approximately equals 15 km/s, and then remain essentially flat for rotation rates up to at least v sin i approximately equal to 100 km/s. The dispersion in rotation among low-mass stars in the Pleiades is by far the dominant contributor to the dispersion in L(subx) at a given mass. Only about 35 percent of the B.A. and early F stars in the Pleiades are detected as X-ray sources in our survey. There is no correlation between X-ray flux and rotation for these stars. The X-ray luminosity function for the early-type Pleiades stars appears to be bimodal, with only a few exceptions. We either detect these stars at fluxes in the range found for low-mass stars or we derive X-ray limits below the level found for most Pleiades dwarfs. The X-ray spectra for the early-type Pleiades stars

  14. Post-main-sequence Evolution of Icy Minor Planets. III. Water Retention in Dwarf Planets and Exomoons and Implications for White Dwarf Pollution

    SciTech Connect

    Malamud, Uri; Perets, Hagai B., E-mail: uri.mal@tx.technion.ac.il, E-mail: hperets@physics.technion.ac.il

    Studies suggest that the pollution of white dwarf (WD) atmospheres arises from the accretion of minor planets, but the exact properties of polluting material, and in particular the evidence for water in some cases are not yet understood. Several previous works studied the possibility of water surviving inside minor planets around evolving stars. However, they all focused on small, comet-sized to moonlet-sized minor planets, when the inferred mass inside the convection zones of He-dominated WDs could actually be compatible with much more massive minor planets. Here we explore for the first time, the water retention inside exoplanetary dwarf planets, ormore » moderate-sized moons, with radii of the order of hundreds of kilometers. This paper concludes a series of papers that has now covered nearly the entire potential mass range of minor planets, in addition to the full mass range of their host stars. We find that water retention is (a) affected by the mass of the WD progenitor, and (b) it is on average at least 5%, irrespective of the assumed initial water composition, if it came from a single accretion event of an icy dwarf planet or moon. The latter prediction strengthens the possibility of habitability in WD planetary systems, and it may also be used in order to distinguish between pollution originating from multiple small accretion events and singular large accretion events. To conclude our work, we provide a code that calculates ice and water retention by interpolation and may be freely used as a service to the community.« less

  15. High sedimentation rates in the Early Triassic after latest Permian mass extinction: Carbonate production is main factor in non-Arctic regions

    NASA Astrophysics Data System (ADS)

    Horacek, Micha; Brandner, Rainer

    2016-04-01

    A substantial change in sedimentation rates towards higher values has been documented from the Late Permian to the Lower Triassic. Although it is assumed and also has been shown that the deposition of siliciclastic material increased in the Lower Triassic due to stronger erosion because of loss of land cover and increased chemical and physical weathering with extreme climate warming, the main sediment production occurred by marine carbonate production. Still, carbonate production might have been significantly influenced by weathering and erosion in the hinterland, as the transport of dust by storms into the ocean water probably was a main nutrient source for microbial carbonate producers, because "normal" nutrient supply by ocean circulation, i. e. upwelling was strongly reduced due to the elevated temperatures resulting in water-column stratification . Sediment accumulation was also clearly influenced by the paleo-geographic and latitudinal position, with lower carbonate production and sedimentation rates in moderate latitudes. The existence of a "boundary clay" and microbial carbonate mounds and layers in the immediate aftermath of the latest Permian mass extinction points towards a development from a short-timed acid ocean water - resulting in a carbonate production gap and the deposition of the boundary clay towards the deposition of the microbial mounds and layers due to the microbial production of micro-environments with higher alkalinity allowing the production of carbonate. After the return of the ocean water to normal alkalinity planktic production of carbonate resulted in a very high sedimentation rate, especially taking into account the absence of carbonate producing eukaryotic algae and animals.

  16. UVnovo: A De Novo Sequencing Algorithm Using Single Series of Fragment Ions via Chromophore Tagging and 351 nm Ultraviolet Photodissociation Mass Spectrometry

    PubMed Central

    Robotham, Scott A.; Horton, Andrew P.; Cannon, Joe R.; Cotham, Victoria C.; Marcotte, Edward M.; Brodbelt, Jennifer S.

    2016-01-01

    De novo peptide sequencing by mass spectrometry represents an important strategy for characterizing novel peptides and proteins, in which a peptide’s amino acid sequence is inferred directly from the precursor peptide mass and tandem mass spectrum (MS/MS or MS3) fragment ions, without comparison to a reference proteome. This method is ideal for organisms or samples lacking a complete or well-annotated reference sequence set. One of the major barriers to de novo spectral interpretation arises from confusion of N- and C-terminal ion series due to the symmetry between b and y ion pairs created by collisional activation methods (or c, z ions for electron-based activation methods). This is known as the ‘antisymmetric path problem’ and leads to inverted amino acid subsequences within a de novo reconstruction. Here, we combine several key strategies for de novo peptide sequencing into a single high-throughput pipeline: high efficiency carbamylation blocks lysine side chains, and subsequent tryptic digestion and N-terminal peptide derivatization with the ultraviolet chromophore AMCA yields peptides susceptible to 351 nm ultraviolet photodissociation (UVPD). UVPD-MS/MS of the AMCA-modified peptides then predominantly produces y ions in the MS/MS spectra, specifically addressing the antisymmetric path problem. Finally, the program UVnovo applies a random forest algorithm to automatically learn from and then interpret UVPD mass spectra, passing results to a hidden Markov model for de novo sequence prediction and scoring. We show this combined strategy provides high performance de novo peptide sequencing, enabling the de novo sequencing of thousands of peptides from an E. coli lysate at high confidence. PMID:26938041

  17. Mass spectrometry analysis and transcriptome sequencing reveal glowing squid crystal proteins are in the same superfamily as firefly luciferase

    PubMed Central

    Gimenez, Gregory; Metcalf, Peter; Paterson, Neil G.; Sharpe, Miriam L.

    2016-01-01

    The Japanese firefly squid Hotaru-ika (Watasenia scintillans) produces intense blue light from photophores at the tips of two arms. These photophores are densely packed with protein microcrystals that catalyse the bioluminescent reaction using ATP and the substrate coelenterazine disulfate. The squid is the only organism known to produce light using protein crystals. We extracted microcrystals from arm tip photophores and identified the constituent proteins using mass spectrometry and transcriptome libraries prepared from arm tip tissue. The crystals contain three proteins, wsluc1–3, all members of the ANL superfamily of adenylating enzymes. They share 19 to 21% sequence identity with firefly luciferases, which produce light using ATP and the unrelated firefly luciferin substrate. We propose that wsluc1–3 form a complex that crystallises inside the squid photophores, and that in the crystal one or more of the proteins catalyses the production of light using coelenterazine disulfate and ATP. These results suggest that ANL superfamily enzymes have independently evolved in distant species to produce light using unrelated substrates. PMID:27279452

  18. Identification and Characterization of Clostridium difficile Sequence Type 37 Genotype by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.

    PubMed

    Li, Ruxin; Xiao, Di; Yang, Jing; Sun, Suju; Kaplan, Samuel; Li, Zhirong; Niu, Yanan; Qiang, Cuixin; Zhai, Yu; Wang, Xiaoming; Zhao, Xingzhen; Zhao, Baoxin; Welker, Martin; Pincus, David H; Jin, Dazhi; Kamboj, Mini; Zheng, Guanghui; Zhang, Guojun; Zhang, Jianzhong; Tang, Yi-Wei; Zhao, Jianhong

    2018-05-01

    Clostridium difficile multilocus sequence type 37 (ST37), which mainly corresponds to ribotype 017, has been a dominant genotype circulating in China. In this study, we report the use of matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) to analyze and characterize 204 C. difficile clinical isolates, including 49 ST37 and 155 non-ST37 isolates collected in China and other countries. The distributions of two major protein peaks ( m/z 3,242 and 3,286) were significantly different between ST37 and non-ST37 prototype strains and clinical isolates. This difference was reproducible when analysis was performed on different colonies in different runs. This finding was repeated and confirmed by both bioMérieux Vitek MS and Bruker Microflex LT systems on isolates recovered from a variety of geographic regions worldwide. The combination of the two peaks was present in 47 of 49 ST37 isolates, resulting in a sensitivity of 95.9%. In contrast, the peak combination was absent in 153 of 155 non-ST37 isolates, resulting in a specificity of 98.7%. Our results suggest that MALDI-TOF MS is a rapid and reliable tool to identify C. difficile genotype ST37. Work is in progress to characterize the two molecules having peaks at m/z 3,242 and 3,286, which appear to be specific to C. difficile genotype ST37. Copyright © 2018 American Society for Microbiology.

  19. Rupture process of a multiple main shock sequence: analysis of teleseismic, local and field observations of the Tennant Creek, Australia, earthquakes of January 22, 1988

    USGS Publications Warehouse

    Choy, G.L.; Bowman, J.R.

    1990-01-01

    On January 22, 1988, three large intraplate earthquakes (with MS 6.3, 6.4 and 6.7) occurred within a 12-hour period near Tennant Creek, Australia. Broadband displacement and velocity records of body waves from teleseismically recorded data are analyzed to determine source mechanisms, depths, and complexity of rupture of each of the three main shocks. Hypocenters of an additional 150 foreshocks and aftershocks constrained by local arrival time data and field observations of surface rupture are used to complement the source characteristics of the main shocks. The interpretation of the combined data sets suggests that the overall rupture process involved unusually complicated stress release. Rupture characteristics suggest that substantial slow slip occurred on each of the three fault interfaces that was not accompanied by major energy release. Variation of focal depth and the strong increase of moment and radiated energy with each main shock imply that lateral variations of strength were more important than vertical gradients of shear stress in controlling the progression of rupture. -from Authors

  20. Sequencing analysis of ghrelin gene 5' flanking region: relations between the sequence variants, fasting plasma total ghrelin concentrations, and body mass index.

    PubMed

    Vartiainen, Johanna; Kesäniemi, Y Antero; Ukkola, Olavi

    2006-10-01

    Ghrelin is a 28-amino-acid peptide with several functions linked to energy metabolism. Low ghrelin plasma concentrations are associated with obesity, hypertension, and type 2 diabetes mellitus, whereas high concentrations reflect states of negative energy balance. Several studies addressing the hormonal and neural regulation of ghrelin gene expression have been carried out, but the role of genetic factors in the regulation of ghrelin plasma levels remains unclear. To elucidate the role of genetic factors in the regulation of ghrelin expression, we screened 1657 nucleotides of the ghrelin gene 5' flanking region (promoter and possible regulatory sites) for new sequential variations from patient samples with low (n = 50) and high (n = 50) fasting plasma total ghrelin concentrations (low- and high-ghrelin groups). Eleven single nucleotide polymorphisms (SNPs), 3 of which were rare variants (allelic frequency less than 1%) were found in our population. The genotype distribution patterns of the SNPs did not differ between the study groups, except for SNP-501A>C (P = .039). In addition, the SNP-01A>C was associated with body mass index (BMI) (P = .018). This variant was studied further in our large and well-defined Oulu Project Elucidating Risk for Atherosclerosis (OPERA) cohort (n = 1045) by the restriction fragment length polymorphism (RFLP) technique. No significant association of SNP-501A>C genotypes with fasting ghrelin plasma concentrations was found in the whole OPERA population. However, the association of this SNP with BMI and with waist circumference reached statistical significance in OPERA (P = .047 and .049, respectively), remaining of borderline significance for BMI after adjustments (P = .055). The results indicate that factors other than the 11 SNPs found in this study in the 5' flanking region of ghrelin gene are the main determinants of ghrelin plasma levels. However, SNP-501 A>C genotype distribution seems to be different in subjects having the highest

  1. The VLT-FLAMES Tarantula Survey. XIX. B-type supergiants: Atmospheric parameters and nitrogen abundances to investigate the role of binarity and the width of the main sequence

    NASA Astrophysics Data System (ADS)

    McEvoy, C. M.; Dufton, P. L.; Evans, C. J.; Kalari, V. M.; Markova, N.; Simón-Díaz, S.; Vink, J. S.; Walborn, N. R.; Crowther, P. A.; de Koter, A.; de Mink, S. E.; Dunstall, P. R.; Hénault-Brunet, V.; Herrero, A.; Langer, N.; Lennon, D. J.; Maíz Apellániz, J.; Najarro, F.; Puls, J.; Sana, H.; Schneider, F. R. N.; Taylor, W. D.

    2015-03-01

    Context. Model atmosphere analyses have been previously undertaken for both Galactic and extragalactic B-type supergiants. By contrast, little attention has been given to a comparison of the properties of single supergiants and those that are members of multiple systems. Aims: Atmospheric parameters and nitrogen abundances have been estimated for all the B-type supergiants identified in the VLT-FLAMES Tarantula survey. These include both single targets and binary candidates. The results have been analysed to investigate the role of binarity in the evolutionary history of supergiants. Methods: tlusty non-local thermodynamic equilibrium (LTE) model atmosphere calculations have been used to determine atmospheric parameters and nitrogen abundances for 34 single and 18 binary supergiants. Effective temperatures were deduced using the silicon balance technique, complemented by the helium ionisation in the hotter spectra. Surface gravities were estimated using Balmer line profiles and microturbulent velocities deduced using the silicon spectrum. Nitrogen abundances or upper limits were estimated from the N ii spectrum. The effects of a flux contribution from an unseen secondary were considered for the binary sample. Results: We present the first systematic study of the incidence of binarity for a sample of B-type supergiants across the theoretical terminal age main sequence (TAMS). To account for the distribution of effective temperatures of the B-type supergiants it may be necessary to extend the TAMS to lower temperatures. This is also consistent with the derived distribution of mass discrepancies, projected rotational velocities and nitrogen abundances, provided that stars cooler than this temperature are post-red supergiant objects. For all the supergiants in the Tarantula and in a previous FLAMES survey, the majority have small projected rotational velocities. The distribution peaks at about 50 km s-1 with 65% in the range 30 km s-1 ≤ vesini ≤ 60 km s-1. About

  2. VARIABILITY OF DISK EMISSION IN PRE-MAIN SEQUENCE AND RELATED STARS. III. EXPLORING STRUCTURAL CHANGES IN THE PRE-TRANSITIONAL DISK IN HD 169142

    SciTech Connect

    Wagner, Kevin R.; Sitko, Michael L.; Swearingen, Jeremy R.

    We present near-IR (NIR) and far-UV observations of the pre-transitional (gapped) disk in HD 169142 using NASA's Infrared Telescope Facility and Hubble Space Telescope. The combination of our data along with existing data sets into the broadband spectral energy distribution reveals variability of up to 45% between ∼1.5-10 μm over a maximum timescale of 10 yr. All observations known to us separate into two distinct states corresponding to a high near-IR state in the pre-2000 epoch and a low state in the post-2000 epoch, indicating activity within the ≲1 AU region of the disk. Through analysis of the Pa β and Brmore » γ lines in our data we derive a mass accretion rate in 2013 May of M-dot ≈ (1.5-2.7) × 10{sup –9} M {sub ☉} yr{sup –1}. We present a theoretical modeling analysis of the disk in HD 169142 using Monte-Carlo radiative transfer simulation software to explore the conditions and perhaps signs of planetary formation in our collection of 24 yr of observations. We find that shifting the outer edge (r ≈ 0.3 AU) of the inner disk by 0.05 AU toward the star (in simulation of accretion and/or sculpting by forming planets) successfully reproduces the shift in NIR flux. We establish that the ∼40-70 AU dark ring imaged in the NIR by Quanz et al. and Momose et al. and at 7 mm by Osorio et al. may be reproduced with a 30% scaled density profile throughout the region, strengthening the link to this structure being dynamically cleared by one or more planetary mass bodies.« less

  3. Front-End Electron Transfer Dissociation Coupled to a 21 Tesla FT-ICR Mass Spectrometer for Intact Protein Sequence Analysis

    NASA Astrophysics Data System (ADS)

    Weisbrod, Chad R.; Kaiser, Nathan K.; Syka, John E. P.; Early, Lee; Mullen, Christopher; Dunyach, Jean-Jacques; English, A. Michelle; Anderson, Lissa C.; Blakney, Greg T.; Shabanowitz, Jeffrey; Hendrickson, Christopher L.; Marshall, Alan G.; Hunt, Donald F.

    2017-09-01

    High resolution mass spectrometry is a key technology for in-depth protein characterization. High-field Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) enables high-level interrogation of intact proteins in the most detail to date. However, an appropriate complement of fragmentation technologies must be paired with FTMS to provide comprehensive sequence coverage, as well as characterization of sequence variants, and post-translational modifications. Here we describe the integration of front-end electron transfer dissociation (FETD) with a custom-built 21 tesla FT-ICR mass spectrometer, which yields unprecedented sequence coverage for proteins ranging from 2.8 to 29 kDa, without the need for extensive spectral averaging (e.g., 60% sequence coverage for apo-myoglobin with four averaged acquisitions). The system is equipped with a multipole storage device separate from the ETD reaction device, which allows accumulation of multiple ETD fragment ion fills. Consequently, an optimally large product ion population is accumulated prior to transfer to the ICR cell for mass analysis, which improves mass spectral signal-to-noise ratio, dynamic range, and scan rate. We find a linear relationship between protein molecular weight and minimum number of ETD reaction fills to achieve optimum sequence coverage, thereby enabling more efficient use of instrument data acquisition time. Finally, real-time scaling of the number of ETD reactions fills during method-based acquisition is shown, and the implications for LC-MS/MS top-down analysis are discussed. [Figure not available: see fulltext.

  4. Variability of Disk Emission in Pre-Main Sequence and Related Stars. II. Variability in the Gas and Dust Emission of the Herbig Fe Star SAO 206462

    NASA Technical Reports Server (NTRS)

    Sitko, Michael L.; Day, Amanda N.; Kimes, Robin L.; Beerman, Lori C.; Martus, Cameron; Lynch, David K.; Russell, Ray W.; Grady, Carol A.; Schneider, Glenn; Lisse, Carey M.; hide

    2011-01-01

    We present thirteen epochs of near-infrared (0.8-5 microns) spectroscopic observations of the pre-transitional, "gapped" disk system in SAO 206462 (=HD 135344B). In all, six gas emission lines (Br(alpha) , Br(gamma), Pa(beta), Pa(delta), Pa(epsilon), and the 0.8446 microns line of O I) along with continuum measurements made near the standard J, H, K, and L photometric bands were measured. A mass accretion rate of approximately 2 x 10(exp 8)Solar Mass/yr was derived from the Br(gamma) and Pa(beta) lines. However, the fluxes of these lines varied by a factor of over two during the course of a few months. The continuum also varied, but by only approx.30%, and even decreased at a time when the gas emission was increasing. The H I line at 1.083 microns was also found to vary in a manner inconsistent with that of either the hydrogen lines or the dust. Both the gas and dust variabilities indicate significant changes in the region of the inner gas and the inner dust belt that may be common to many young disk systems. If planets are responsible for defining the inner edge of the gap, they could interact with the material on time scales commensurate with what is observed for the variations in the dust, while other disk instabilities (thermal, magneto-rotational) would operate there on longer time scales than we observe for the inner dust belt. For SAO 206462, the orbital period would likely be 1-3 years. If the changes are being induced in the disk material closer to the star than the gap, a variety of mechanisms (disk instabilities, interactions via planets) might be responsible for the changes seen. The He I feature is most likely due to a wind whose orientation changes with respect to the observer on time scales of a day or less. To further constrain the origin of the gas and dust emission will require multiple spectroscopic and interferometric observations on both shorter and longer time scales that have been sampled so far.

  5. Variability of Disk Emission in Pre-main-sequence and Related Stars. IV. Investigating the Structural Changes in the Inner Disk Region of MWC 480

    NASA Astrophysics Data System (ADS)

    Fernandes, Rachel B.; Long, Zachary C.; Pikhartova, Monika; Sitko, Michael L.; Grady, Carol A.; Russell, Ray W.; Luria, David M.; Tyler, Dakotah B.; Bayyari, Ammar; Danchi, William; Wisniewski, John P.

    2018-04-01

    We present five epochs of near-IR observations of the protoplanetary disk around MWC 480 (HD 31648) obtained with the SpeX spectrograph on NASA’s Infrared Telescope Facility between 2007 and 2013, inclusive. Using the measured line fluxes in the Pa β and Br γ lines, we found the mass accretion rates to be (1.26–2.30) × 10‑7 M ⊙ yr‑1 and (1.4–2.01) × 10‑7 M ⊙ yr‑1, respectively, but which varied by more than 50% from epoch to epoch. The spectral energy distribution reveals a variability of about 30% between 1.5 and 10 μm during this same period of time. We investigated the variability using of the continuum emission of the disk in using the Monte-Carlo Radiative Transfer Code HOCHUNK3D. We find that varying the height of the inner rim successfully produces a change in the NIR flux but lowers the far-IR emission to levels below all measured fluxes. Because the star exhibits bipolar flows, we utilized a structure that simulates an inner disk wind to model the variability in the near-IR, without producing flux levels in the far-IR that are inconsistent with existing data. For this object, variable near-IR emission due to such an outflow is more consistent with the data than changing the scale height of the inner rim of the disk.

  6. Photospheric Acne at The Bottom of the Main-Sequence: Doppler Images of M4.5 - M9V Stars

    NASA Astrophysics Data System (ADS)

    Barnes, John R.; Haswell, Carole A.; Jeffers, Sandra V.; Jones, Hugh R. A.; Pavlenko, Yakiv V.; Lohr, Marcus E.; Jenkins, James S.

    2016-07-01

    Starspots are an important manifestation of stellar activity and yet their distribution patterns on the lowest mass stars is notwell known. Time series spectra of fullyconvective M dwarfs taken in the red-optical with UVES reveal numerous line profiledistortions which are interpreted as starspots. New Doppler images of HU Del (GJ 791.2A; M4.5V), BL Ceti (GJ 65A; M5.5V)and UV Ceti (GJ 65B; M6V) attwoepochs separated by three nights are presented. We find that contrastratioscorrespondingto photosphere-spot temperature differences of only 100-400 Kare sufficient to model the time series spectra of M4.5V - M9Vstars. Starspotsare reconstructed at a range of phases and latitudes with mean spot filling factors of only a few per cent.The distribution and low-contrast of the spots/spot-groups that we recover are likely to be responsible for the low amplitudephotometric variability seen in late-M dwarfs. The stability of the spot patterns in the two sets of timeseries observationsenables us to measure the latitude dependent differential rotation, which we find to be consistent with zero.

  7. Sensitive determination of THC and main metabolites in human plasma by means of microextraction in packed sorbent and gas chromatography-tandem mass spectrometry.

    PubMed

    Rosado, T; Fernandes, L; Barroso, M; Gallardo, E

    2017-02-01

    Cannabis is one of the most available and consumed illicit drug in the world and its identification and quantification in biological specimens can be a challenge given its low concentrations in body fluids. The present work describes a fast and fully validated procedure for the simultaneous detection and quantification of ▵ 9 -tetrahydrocannabinol (▵ 9_ THC) and its two main metabolites 11-hydroxy ▵ 9_ tetrahydrocannabinol (11-OH-THC) and 11-nor-9-carboxy-▵ 9 - tetrahydrocannbinol (THC-COOH) in plasma samples using microextraction by packed sorbent (MEPS) and gas chromatography-tandem mass spectrometry (GC-MS/MS). A small plasma volume (0.25mL) pre-diluted (1:20), was extracted with MEPS M1 sorbent as follows: conditioning (4 cycles of 250μL methanol and 4 cycles of 250μL 0.1% formic acid in water); sample load (26 cycles of 250μL); wash (100μL of 3% acetic acid in water followed by 100μL 5% methanol in water); and elution (6 cycles of 100μL of 10% ammonium hydroxide in methanol). The procedure allowed the quantification of all analytes in the range of 0.1-30ng/mL. Recoveries ranged from 53 to 78% (THC), 57 to 66% (11-OH-THC) and 62 to 65% (THC-COOH), allowing the limits of detection and quantification to be set at 0.1ng/mL for all compounds. Intra-day precision and accuracy revealed coefficients of variation (CVs) lower than 10% at the studied concentrations, with a mean relative error within±9%, while inter-day precision and accuracy showed CVs lower than 15% for all analytes at the tested concentrations, with an inaccuracy within±8%. Copyright © 2016 Elsevier B.V. All rights reserved.

  8. Identification and quantification of the main isoflavones and other phytochemicals in soy based nutraceutical products by liquid chromatography-orbitrap high resolution mass spectrometry.

    PubMed

    López-Gutiérrez, Noelia; Romero-González, Roberto; Garrido Frenich, Antonia; Martínez Vidal, José Luis

    2014-06-27

    The specific phytochemicals composition of soy nutritional supplements is usually not labelled. Hence, 12 dietary supplements were analyzed in order to detect and identify the main phytochemicals present in these samples, using a database containing 60 compounds. Ultra-high performance liquid chromatography coupled to single-stage Orbitrap high resolution mass spectrometry (UHPLC-Orbitrap-MS) has been used. Two consecutive extractions, using as extraction solvent a mixture of methanol:water (80:20, v/v), were employed, followed by two dilutions (10 or 100 times depending on the concentration of the components in the sample) with a mixture of an aqueous solution of ammonium acetate 30mM:methanol (50:50, v/v). The method was validated, obtaining adequate recovery and precision values. Limits of detection (LODs) and quantification (LOQs) were calculated, ranging from 2 to 150μgL(-1). Isoflavones were the predominant components present in the analyzed supplements with values higher than 93% of the total amount of phytochemicals in all cases. The aglycones (genistein, daidzein, glycitein and biochanin A) as well as their three conjugated forms, β-glucosides (genistin, daizin and glycitin) were detected and quantified, being daidzein the isoflavone detected at higher concentration in 8 out of 12 samples reported, with values ranging from 684 to 35,970mgkg(-1), whereas biochanin A was detected at very low concentrations, ranging from 18 to 50mgkg(-1). Moreover, other phytochemicals as flavones, flavonols, flavanones and phenolic acids were also detected and quantified. Copyright © 2014 Elsevier B.V. All rights reserved.

  9. Chemical Abundances of Main-sequence, Turnoff, Subgiant, and Red Giant Stars from APOGEE Spectra. I. Signatures of Diffusion in the Open Cluster M67

    NASA Astrophysics Data System (ADS)

    Souto, Diogo; Cunha, Katia; Smith, Verne V.; Allende Prieto, C.; García-Hernández, D. A.; Pinsonneault, Marc; Holzer, Parker; Frinchaboy, Peter; Holtzman, Jon; Johnson, J. A.; Jönsson, Henrik; Majewski, Steven R.; Shetrone, Matthew; Sobeck, Jennifer; Stringfellow, Guy; Teske, Johanna; Zamora, Olga; Zasowski, Gail; Carrera, Ricardo; Stassun, Keivan; Fernandez-Trincado, J. G.; Villanova, Sandro; Minniti, Dante; Santana, Felipe

    2018-04-01

    Detailed chemical abundance distributions for 14 elements are derived for eight high-probability stellar members of the solar metallicity old open cluster M67 with an age of ∼4 Gyr. The eight stars consist of four pairs, with each pair occupying a distinct phase of stellar evolution: two G dwarfs, two turnoff stars, two G subgiants, and two red clump (RC) K giants. The abundance analysis uses near-IR high-resolution spectra (λ1.5–1.7 μm) from the Apache Point Observatory Galactic Evolution Experiment survey and derives abundances for C, N, O, Na, Mg, Al, Si, K, Ca, Ti, V, Cr, Mn, and Fe. Our derived stellar parameters and metallicity for 2M08510076+1153115 suggest that this star is a solar twin, exhibiting abundance differences relative to the Sun of ≤0.04 dex for all elements. Chemical homogeneity is found within each class of stars (∼0.02 dex), while significant abundance variations (∼0.05–0.20 dex) are found across the different evolutionary phases; the turnoff stars typically have the lowest abundances, while the RCs tend to have the largest. Non-LTE corrections to the LTE-derived abundances are unlikely to explain the differences. A detailed comparison of the derived Fe, Mg, Si, and Ca abundances with recently published surface abundances from stellar models that include chemical diffusion provides a good match between the observed and predicted abundances as a function of stellar mass. Such agreement would indicate the detection of chemical diffusion processes in the stellar members of M67.

  10. A Spatially Resolved Investigation on the Influence of AGN and Star Formation in a Lensed Main-Sequence Galaxy at z = 2.39

    NASA Astrophysics Data System (ADS)

    Fischer, Travis; Rigby, Jane; Gladders, Michael; Sharon, Keren q.; Barrientos, L. Felipe; Bayliss, Matt; Dahle, Håkon; Florian, Michael; Johnson, Traci Lin; Wuyts, Eva

    2018-01-01

    We present rest-frame optical SINFONI integral field spectroscopy and rest-frame UV HST imaging of a lensed galaxy hosting an active galactic nucleus (AGN) at z = 2.39. Galactic wind feedback is widely acknowledged to play a critical role in the evolution of galaxies, however, the physical mechanisms involved and the relative importance of AGN and star formation as the main feedback drivers remain poorly understood. AGN-driven feedback has been evident in very luminous but rare quasars and radio galaxies, but observational evidence remains lacking for less extreme, “normal” star-forming galaxies. We report, for the first time at high redshift, spatially resolved velocity profiles and geometries of an AGN-driven outflow in a normal star-forming galaxy and spatial extents and morphologies of Lyα emission and stellar UV continuum. Analyzing these measurements in tandem, we determine the physical conditions, geometry, and excitation sources of the interstellar medium in a star-forming, AGN-hosting galaxy at cosmic noon.

  11. Atypical yeasts identified as Saccharomyces cerevisiae by MALDI-TOF MS and gene sequencing are the main responsible of fermentation of chicha, a traditional beverage from Peru.

    PubMed

    Vallejo, Juan Andrés; Miranda, Patricia; Flores-Félix, José David; Sánchez-Juanes, Fernando; Ageitos, José M; González-Buitrago, José Manuel; Velázquez, Encarna; Villa, Tomás G

    2013-12-01

    Chicha is a drink prepared in several Andean countries from Inca's times by maize fermentation. Currently this fermentation is carried out in familiar artesanal "chicherías" that make one of the most known types of chicha, the "chicha de jora". In this study we isolate and identify the yeasts mainly responsible of the fermentation process in this type of chicha in 10 traditional "chicherías" in Cusco region in Peru. We applied by first time MALDI-TOF MS analysis for the identification of yeast of non-clinic origin and the results showed that all of yeast strains isolated belong to the species Saccharomyces cerevisiae. These results agree with those obtained after the analysis of the D1/D2 and 5.8S-ITS regions. However the chicha strains have a phenotypic profile that differed in more than 40% as compared to that of current S. cerevisiae strains. To the best of our knowledge this is the first report concerning the yeasts involved in chicha fermentation. Copyright © 2013 Elsevier GmbH. All rights reserved.

  12. VARIABILITY OF DISK EMISSION IN PRE-MAIN SEQUENCE AND RELATED STARS. II. VARIABILITY IN THE GAS AND DUST EMISSION OF THE HERBIG Fe STAR SAO 206462

    SciTech Connect

    Sitko, Michael L.; Day, Amanda N.; Kimes, Robin L.

    2012-01-20

    We present 13 epochs of near-infrared (0.8-5 {mu}m) spectroscopic observations of the pre-transitional, 'gapped' disk system in SAO 206462 (=HD 135344B). In all, six gas emission lines (Br{alpha}, Br{gamma}, Pa{beta}, Pa{gamma}, Pa{delta}, Pa{epsilon}, and the 0.8446 {mu}m line of O I) along with continuum measurements made near the standard J, H, K, and L photometric bands were measured. A mass accretion rate of approximately 2 Multiplication-Sign 10{sup -8} M{sub Sun} yr{sup -1} was derived from the Br{gamma} and Pa{beta} lines. However, the fluxes of these lines varied by a factor of over two during the course of a few months.more » The continuum also varied, but by only {approx}30%, and even decreased at a time when the gas emission was increasing. The H I line at 1.083 {mu}m was also found to vary in a manner inconsistent with that of either the hydrogen lines or the dust. Both the gas and dust variabilities indicate significant changes in the region of the inner gas and the inner dust belt that may be common to many young disk systems. If planets are responsible for defining the inner edge of the gap, they could interact with the material on timescales commensurate with what is observed for the variations in the dust, while other disk instabilities (thermal, magnetorotational) would operate there on longer timescales than we observe for the inner dust belt. For SAO 206462, the orbital period would likely be 1-3 years. If the changes are being induced in the disk material closer to the star than the gap, a variety of mechanisms (disk instabilities, interactions via planets) might be responsible for the changes seen. The He I feature is most likely due to a wind whose orientation changes with respect to the observer on timescales of a day or less. To further constrain the origin of the gas and dust emission will require multiple spectroscopic and interferometric observations on both shorter and longer timescales that have been sampled so far.« less

  13. The evolution of massive stars and their spectra. I. A non-rotating 60 M⊙ star from the zero-age main sequence to the pre-supernova stage

    NASA Astrophysics Data System (ADS)

    Groh, Jose H.; Meynet, Georges; Ekström, Sylvia; Georgy, Cyril

    2014-04-01

    For the first time, the interior and spectroscopic evolution of a massive star is analyzed from the zero-age main sequence (ZAMS) to the pre-supernova (SN) stage. For this purpose, we combined stellar evolution models using the Geneva code and stellar atmospheric/wind models using CMFGEN. With our approach, we were able to produce observables, such as a synthetic high-resolution spectrum and photometry, thereby aiding the comparison between evolution models and observed data. Here we analyze the evolution of a non-rotating 60 M⊙ star and its spectrum throughout its lifetime. Interestingly, the star has a supergiant appearance (luminosity class I) even at the ZAMS. We find the following evolutionary sequence of spectral types: O3 I (at the ZAMS), O4 I (middle of the H-core burning phase), B supergiant (BSG), B hypergiant (BHG), hot luminous blue variable (LBV; end of H-core burning), cool LBV (H-shell burning through the beginning of the He-core burning phase), rapid evolution through late WN and early WN, early WC (middle of He-core burning), and WO (end of He-core burning until core collapse). We find the following spectroscopic phase lifetimes: 3.22 × 106 yr for the O-type, 0.34 × 105 yr (BSG), 0.79 × 105 yr (BHG), 2.35 × 105 yr (LBV), 1.05 × 105 yr (WN), 2.57 × 105 yr (WC), and 3.80 × 104 yr (WO). Compared to previous studies, we find a much longer (shorter) duration for the early WN (late WN) phase, as well as a long-lived LBV phase. We show that LBVs arise naturally in single-star evolution models at the end of the MS when the mass-loss rate increases as a consequence of crossing the bistability limit. We discuss the evolution of the spectra, magnitudes, colors, and ionizing flux across the star's lifetime, and the way they are related to the evolution of the interior. We find that the absolute magnitude of the star typically changes by ~6 mag in optical filters across the evolution, with the star becoming significantly fainter in optical filters at

  14. Simultaneous quantification of 5 main components of Psoralea corylifolia L. in rats' plasma by utilizing ultra high pressure liquid chromatography tandem mass spectrometry.

    PubMed

    Gao, Qianqian; Xu, Zisheng; Zhao, Genhua; Wang, Heng; Weng, Zebin; Pei, Ke; Wu, Li; Cai, Baochang; Chen, Zhipeng; Li, Weidong

    2016-02-01

    Psoralea corylifolia L. has long been used in traditional Chinese medicine for treating and preventing many diseases. A group of flavonoid components are regarded as the active principals within the seeds. In this research, a rapid, accurate and sensitive ultra high pressure liquid chromatography tandem mass spectrometry (UHPLC/MS/MS) method has been established for simultaneous quantification of its 5 main components, namely, neobavaisoflavone, bavachin, isobavachalcone, bavachinin and corylifol A in rats' plasma after the rats were orally administrated with Buguzhi extract. Negative ion electrospray mode was applied in the detection process. Multiple reactions monitoring (MRM) mode was utilized for simultaneous quantitative analyzing of neobavaisoflavone (m/z 321.1→m/z 265.1), bavachin (m/z 323.1→m/z 119.0), isobavachalcone (m/z 323.2→m/z 119.0), bavachinin (m/z 337.2→m/z 119.0), corylifol A (m/z 389.2→m/z 277.0) and liquiritigenin (Internal Standard, m/z 255.1→m/z 119.0). Chromatographic separation of the above mentioned components was conducted on a Waters BEH-C18 column (100 mm×2.1mm, 1.7μm) with gradient elution system at flow rate of 0.3mL/min. The mobile phase was composed of acetonitrile and 0.1% formic acid solution. The lower limit of quantification (LLOQ) for each of the above analytes was 0.5ng/mL. Each of the analytes exhibited good linearity within the concentration range of 0.5-100ng/mL. The method was fully validated for its selectivity, accuracy, precision, stability, matrix effect and extraction recovery. The validated method has been successfully applied for simultaneous determination of the 5 flavonoids in rat plasma for the first time. Copyright © 2016 Elsevier B.V. All rights reserved.

  15. Distribution of net-collected planktonic cnidarians along the northern Mid-Atlantic Ridge and their associations with the main water masses

    NASA Astrophysics Data System (ADS)

    Hosia, A.; Stemmann, L.; Youngbluth, M.

    2008-01-01

    Planktonic cnidarians and ctenophores were sampled with a multiple opening-closing net (Multinet) as well as a non-quantitative plankton net along the northern Mid-Atlantic Ridge (MAR) between Iceland and the Azores. Sixty-four species or genera of planktonic cnidarians (38 siphonophora, 21 hydromedusae, 5 scyphomedusae) and one genus of ctenophore were collected. Of these, Leuckartiara adnata and Clausophyes laetmata were new records for the area. Multinet samples collected from depths of 0-100, 100-500, 500-1000, 1000-1500 and 1500-2500 m at 11 stations were compared. Multivariate analysis of the data indicated that species composition and abundance along the ridge varied with the dominant water masses, with changes in the cnidarian zooplankton assemblage observed with regard to geographic location as well as depth. The surface waters of the two northernmost stations characterized by modified North Atlantic Water (MNAW) as well as the three southernmost stations characterized by North Atlantic Central Water (NACW) exhibited relatively high abundances (3284-13,915 individuals·1000 m -3) in the upper 100 m. No such peak was evident at the middle stations characterized by Subarctic Intermediate Water (SAIW), where the abundances in the upper three depth strata were consistently lower (57-863 individuals·1000 m -3). Across the study area, the lowest abundances were found in the 1500-2500 m stratum (0-56 ind.·1000 m -3). The main divergence in the species composition and abundance of planktonic cnidarians was observed at the Subpolar Front (SPF), which marked the boundary for the distribution of many species. The divergence at the SPF was strongest in the upper 500 m but observable down to 1500 m. Profoundly different epipelagic species assemblages were observed in SAIW and NACW on opposite sides of the SPF, with the distribution of several species of calycophoran siphonophores confined to the southern NACW. At mid-water depths, the species composition north of the

  16. Mass loss from solar-type stars

    NASA Technical Reports Server (NTRS)

    Hartmann, L.

    1985-01-01

    The present picture of mass loss from solar-type (low-mass) stars is described, with special emphasis on winds from pre-main-sequence stars. Attention is given to winds from T Tauri stars and to angular momentum loss. Prospects are good for further advances in our understanding of the powerful mass loss observed from young stars; ultraviolet spectra obtainable with the Space Telescope should provide better estimates of mass loss rates and a clearer picture of physical conditions in the envelopes of these stars. To understand the mass ejection from old, slowly rotating main-sequence stars, we will have to study the sun.

  17. Main Report

    PubMed Central

    2006-01-01

    Background: States vary widely in their use of newborn screening tests, with some mandating screening for as few as three conditions and others mandating as many as 43 conditions, including varying numbers of the 40+ conditions that can be detected by tandem mass spectrometry (MS/MS). There has been no national guidance on the best candidate conditions for newborn screening since the National Academy of Sciences report of 19751 and the United States Congress Office of Technology Assessment report of 1988,2 despite rapid developments since then in genetics, in screening technologies, and in some treatments. Objectives: In 2002, the Maternal and Child Health Bureau (MCHB) of the Health Resources and Services Administration (HRSA) of the United States Department of Health and Human Services (DHHS) commissioned the American College of Medical Genetics (ACMG) to: Conduct an analysis of the scientific literature on the effectiveness of newborn screening.Gather expert opinion to delineate the best evidence for screening for specified conditions and develop recommendations focused on newborn screening, including but not limited to the development of a uniform condition panel.Consider other components of the newborn screening system that are critical to achieving the expected outcomes in those screened. Methods: A group of experts in various areas of subspecialty medicine and primary care, health policy, law, public health, and consumers worked with a steering committee and several expert work groups, using a two-tiered approach to assess and rank conditions. A first step was developing a set of principles to guide the analysis. This was followed by developing criteria by which conditions could be evaluated, and then identifying the conditions to be evaluated. A large and broadly representative group of experts was asked to provide their opinions on the extent to which particular conditions met the selected criteria, relying on supporting evidence and references from the

  18. Maine Ingredients

    ERIC Educational Resources Information Center

    Waters, John K.

    2009-01-01

    This article features Maine Learning Technology Initiative (MLTI), the nation's first-ever statewide 1-to-1 laptop program which marks its seventh birthday by expanding into high schools, providing an occasion to celebrate--and to examine the components of its success. The plan to put laptops into the hands of every teacher and student in grades 7…

  19. Evolutionary sequences of very hot, low-mass, accreting white dwarfs with application to symbiotic variables and ultrasoft/supersoft low-luminosity x-ray sources

    NASA Technical Reports Server (NTRS)

    Sion, Edward M.; Starrfield, Sumner G.

    1994-01-01

    We present the first detailed model results of quasi-static evolutionary sequences of very hot low-mass white dwarfs accreting hydrogen-rich material at rates between 1 x 10(exp -7) and 1 x 10(exp -9) solar mass/yr. Most of the sequences were generated from starting models whose core thermal structures were not thermally relaxed in the thermal pulse cycle-averaged sense of an asymptotic giant branch stellar core. Hence, the evolution at constant accretion rate was not invariably characterized by series of identical shell flashes. Sequences exhibiting stable steady state nuclear burning at the accretion supply rate as well as sequences exhibiting recurrent thermonuclear shell flashes are presented and discussed. In some cases, the white dwarf accretors remain small (less than 10(exp 11) cm) and very hot even during the shell flash episode. They then experience continued but reduced hydrogen shell burning during the longer quiescent intervals while their surface temperatures increase both because of compressional heating and envelope structure readjustment in response to accretion over thousands of years. Both accretion and continued hydrogen burning power these models with luminosities of a few times 10(exp 37) ergs/s. We suggest that the physical properties of these model sequences are of considerable relevance to the observed outburst and quiescent behavior of those symbiotic variables and symbiotic novae containing low-mass white dwarfs. We also suggest that our models are relevant to the observational characteristics of the growing class of low-luminosity, supersoft/ultrasoft X-ray sources in globular clusters, and the Magellanic Clouds.

  20. The mass-lifetime relation

    NASA Astrophysics Data System (ADS)

    LoPresto, Michael C.

    2018-05-01

    In a recent "AstroNote," I described a simple exercise on the mass-luminosity relation for main sequence stars as an example of exposing students in a general education science course of lower mathematical level to the use of quantitative skills such as collecting and analyzing data. Here I present another attempt at a meaningful experience for such students that again involves both the gathering and analysis of numerical data and comparison with accepted result, this time on the relationship of the mass and lifetimes of main sequence stars. This experiment can stand alone or be used as an extension of the previous mass-luminosity relationship experiment.

  1. Identification and diversity of multiresistant Corynebacterium striatum clinical isolates by MALDI-TOF mass spectrometry and by a multigene sequencing approach

    PubMed Central

    2012-01-01

    Background The genus Corynebacterium is composed of Gram-positive bacteria that are widely distributed throughout the environment; these bacteria are also part of the normal microbiota of human skin and mucous membranes. Multiple studies have shown that species of this genus, including C. striatum, become pathogenic to humans under special conditions. Our aim was to determine the characteristics of clinical multiresistant strains of C. striatum that were isolated in our geographical region, to determine their diversity, and to compare them with the type strain and with related species. We studied fifty-two strains of C. striatum isolated from different hospitals from Mallorca, Spain, mainly from the Hospital Joan March in Bunyola, Mallorca. Most of the strains were isolated from sputum cultures of respiratory samples from patients with chronic obstructive pulmonary disease. To gain further insight into the genetic diversity of the strains, we analysed several housekeeping genes and other genes associated with antibiotic resistance. Strains were also characterised phenotypically by their antibiotic resistance profiles and by MALDI-TOF mass spectrometry analysis. Results The ITS1 region, gyrA and rpoB were chosen as the appropriate genes in the C. striatum genome to study the genetic diversity of C. striatum species and to discriminate between strains. After analysing these three genes, four sequence types (ST2, ST4, ST1 and ST11) were found to be the most abundant. Splits tree analysis of the strains demonstrated that these clinical isolates did not share any alleles with the type strain of the species. Recombination was detected within all of the C. striatum isolates, and different clonal populations were detected within the samples. Conclusions Our results demonstrate that the isolates were best identified using gene-based molecular methods; using these methods, the isolated strains were determined to be different from the type strain of C. striatum. The ITS1

  2. Stellar Rotation on the Main Sequence

    NASA Astrophysics Data System (ADS)

    Soderblom, D.; Murdin, P.

    2000-11-01

    The conservation of ANGULAR MOMENTUM is the one effective counterbalance to the inexorable pull of gravity in the universe, and so everything rotates. Stars acquire their angular momentum when they form, and, indeed, the manner in which nearly all this initial angular momentum is dissipated remains poorly understood, but without substantial angular momentum loss an interstellar cloud could never ...

  3. Serum betaine is inversely associated with low lean mass mainly in men in a Chinese middle-aged and elderly community-dwelling population.

    PubMed

    Huang, Bi-Xia; Zhu, Ying-Ying; Tan, Xu-Ying; Lan, Qiu-Ye; Li, Chun-Lei; Chen, Yu-Ming; Zhu, Hui-Lian

    2016-06-01

    Previous studies have demonstrated that betaine supplements increase lean body mass in livestock and improve muscle performance in human beings, but evidence for its effect on human lean mass is limited. Our study assessed the association of circulating betaine with lean mass and its composition in Chinese adults. A community-based study was conducted on 1996 Guangzhou residents (weight/mass: 1381/615) aged 50-75 years between 2008 and 2010. An interviewer-administered questionnaire was used to collect general baseline information. Fasting serum betaine was assessed using HPLC-MS. A total of 1590 participants completed the body composition analysis performed using dual-energy X-ray absorptiometry during a mean of 3·2 years of follow-up. After adjustment for age, regression analyses demonstrated a positive association of serum betaine with percentage of lean mass (LM%) of the entire body, trunk and limbs in men (all P<0·05) and LM% of the trunk in women (P=0·016). Each sd increase in serum betaine was associated with increases in LM% of 0·609 (whole body), 0·811 (trunk), 0·422 (limbs), 0·632 (arms) and 0·346 (legs) in men and 0·350 (trunk) in women. Multiple logistic regression analysis revealed that the prevalence of lower LM% decreased by 17 % (whole body) and 14 % (trunk) in women and 23 % (whole body), 28 % (trunk), 22 % (arms) and 26 % (percentage skeletal muscle index) in men with each sd increment in serum betaine. Elevated circulating betaine was associated with a higher LM% and lower prevalence of lower LM% in middle-aged and elderly Chinese adults, particularly men.

  4. PepLine: a software pipeline for high-throughput direct mapping of tandem mass spectrometry data on genomic sequences.

    PubMed

    Ferro, Myriam; Tardif, Marianne; Reguer, Erwan; Cahuzac, Romain; Bruley, Christophe; Vermat, Thierry; Nugues, Estelle; Vigouroux, Marielle; Vandenbrouck, Yves; Garin, Jérôme; Viari, Alain

    2008-05-01

    PepLine is a fully automated software which maps MS/MS fragmentation spectra of trypsic peptides to genomic DNA sequences. The approach is based on Peptide Sequence Tags (PSTs) obtained from partial interpretation of QTOF MS/MS spectra (first module). PSTs are then mapped on the six-frame translations of genomic sequences (second module) giving hits. Hits are then clustered to detect potential coding regions (third module). Our work aimed at optimizing the algorithms of each component to allow the whole pipeline to proceed in a fully automated manner using raw nucleic acid sequences (i.e., genomes that have not been "reduced" to a database of ORFs or putative exons sequences). The whole pipeline was tested on controlled MS/MS spectra sets from standard proteins and from Arabidopsis thaliana envelope chloroplast samples. Our results demonstrate that PepLine competed with protein database searching softwares and was fast enough to potentially tackle large data sets and/or high size genomes. We also illustrate the potential of this approach for the detection of the intron/exon structure of genes.

  5. [Energy and mass exchange and the productivity of the main ecosystems of Siberia (from eddy covariance measurements). 1. Heat balance structure in the vegetation season].

    PubMed

    Chebakova, N M; Vygodskaia, N N; Arnet, A; Belelli Markezini, L; Kolle, O; Kurbatova, Iu A; Parfenova, E I; Valentini, R; Vaganov, E A; Shul'tse, E D

    2013-01-01

    Direct measurements of heat balance (turbulent heat transfer and evaporation heat consumption) by the method of turbulent pulsations in 1998-2000 and 2002-2004 were used to obtain information on the daily, seasonal, and annual dynamics of energy fluxes and mass transfer between the atmosphere and the typical ecosystems of Siberia (middle-taiga pine forest and raised bog, true four-grass steppe, with the use of data for typical tundra) along the Yenisei meridian (90 degrees E).

  6. Identification and verification of hybridoma-derived monoclonal antibody variable region sequences using recombinant DNA technology and mass spectrometry

    USDA-ARS?s Scientific Manuscript database

    Antibody engineering requires the identification of antigen binding domains or variable regions (VR) unique to each antibody. It is the VR that define the unique antigen binding properties and proper sequence identification is essential for functional evaluation and performance of recombinant antibo...

  7. Negative Ion In-Source Decay Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry for Sequencing Acidic Peptides.

    PubMed

    McMillen, Chelsea L; Wright, Patience M; Cassady, Carolyn J

    2016-05-01

    Matrix-assisted laser desorption/ionization (MALDI) in-source decay was studied in the negative ion mode on deprotonated peptides to determine its usefulness for obtaining extensive sequence information for acidic peptides. Eight biological acidic peptides, ranging in size from 11 to 33 residues, were studied by negative ion mode ISD (nISD). The matrices 2,5-dihydroxybenzoic acid, 2-aminobenzoic acid, 2-aminobenzamide, 1,5-diaminonaphthalene, 5-amino-1-naphthol, 3-aminoquinoline, and 9-aminoacridine were used with each peptide. Optimal fragmentation was produced with 1,5-diaminonphthalene (DAN), and extensive sequence informative fragmentation was observed for every peptide except hirudin(54-65). Cleavage at the N-Cα bond of the peptide backbone, producing c' and z' ions, was dominant for all peptides. Cleavage of the N-Cα bond N-terminal to proline residues was not observed. The formation of c and z ions is also found in electron transfer dissociation (ETD), electron capture dissociation (ECD), and positive ion mode ISD, which are considered to be radical-driven techniques. Oxidized insulin chain A, which has four highly acidic oxidized cysteine residues, had less extensive fragmentation. This peptide also exhibited the only charged localized fragmentation, with more pronounced product ion formation adjacent to the highly acidic residues. In addition, spectra were obtained by positive ion mode ISD for each protonated peptide; more sequence informative fragmentation was observed via nISD for all peptides. Three of the peptides studied had no product ion formation in ISD, but extensive sequence informative fragmentation was found in their nISD spectra. The results of this study indicate that nISD can be used to readily obtain sequence information for acidic peptides.

  8. Negative Ion In-Source Decay Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry for Sequencing Acidic Peptides

    NASA Astrophysics Data System (ADS)

    McMillen, Chelsea L.; Wright, Patience M.; Cassady, Carolyn J.

    2016-05-01

    Matrix-assisted laser desorption/ionization (MALDI) in-source decay was studied in the negative ion mode on deprotonated peptides to determine its usefulness for obtaining extensive sequence information for acidic peptides. Eight biological acidic peptides, ranging in size from 11 to 33 residues, were studied by negative ion mode ISD (nISD). The matrices 2,5-dihydroxybenzoic acid, 2-aminobenzoic acid, 2-aminobenzamide, 1,5-diaminonaphthalene, 5-amino-1-naphthol, 3-aminoquinoline, and 9-aminoacridine were used with each peptide. Optimal fragmentation was produced with 1,5-diaminonphthalene (DAN), and extensive sequence informative fragmentation was observed for every peptide except hirudin(54-65). Cleavage at the N-Cα bond of the peptide backbone, producing c' and z' ions, was dominant for all peptides. Cleavage of the N-Cα bond N-terminal to proline residues was not observed. The formation of c and z ions is also found in electron transfer dissociation (ETD), electron capture dissociation (ECD), and positive ion mode ISD, which are considered to be radical-driven techniques. Oxidized insulin chain A, which has four highly acidic oxidized cysteine residues, had less extensive fragmentation. This peptide also exhibited the only charged localized fragmentation, with more pronounced product ion formation adjacent to the highly acidic residues. In addition, spectra were obtained by positive ion mode ISD for each protonated peptide; more sequence informative fragmentation was observed via nISD for all peptides. Three of the peptides studied had no product ion formation in ISD, but extensive sequence informative fragmentation was found in their nISD spectra. The results of this study indicate that nISD can be used to readily obtain sequence information for acidic peptides.

  9. High quality draft genome sequence of Brachymonas chironomi AIMA4T (DSM 19884T) isolated from a Chironomus sp. egg mass

    DOE PAGES

    Laviad, Sivan; Lapidus, Alla; Han, James; ...

    2015-05-27

    Brachymonas chironomi strain AIMA4T (Halpern et al., 2009) is a Gram-negative, non-motile, aerobic, chemoorganotroph bacterium. B. chironomi is a member of the Comamonadaceae, a family within the class Betaproteobacteria. This species was isolated from a chironomid (Diptera; Chironomidae) egg mass, sampled from a waste stabilization pond in northern Israel. Phylogenetic analysis based on the 16S rRNA gene sequences placed strain AIMA4T in the genus Brachymonas. Here we describe the features of this organism, together with the complete genome sequence and annotation. We find the DNA GC content is 63.5%. The chromosome length is 2,509,395 bp. It encodes 2,382 proteins andmore » 68 RNA genes. Brachymonas chironomi genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project.« less

  10. An integrated native mass spectrometry and top-down proteomics method that connects sequence to structure and function of macromolecular complexes

    NASA Astrophysics Data System (ADS)

    Li, Huilin; Nguyen, Hong Hanh; Ogorzalek Loo, Rachel R.; Campuzano, Iain D. G.; Loo, Joseph A.

    2018-02-01

    Mass spectrometry (MS) has become a crucial technique for the analysis of protein complexes. Native MS has traditionally examined protein subunit arrangements, while proteomics MS has focused on sequence identification. These two techniques are usually performed separately without taking advantage of the synergies between them. Here we describe the development of an integrated native MS and top-down proteomics method using Fourier-transform ion cyclotron resonance (FTICR) to analyse macromolecular protein complexes in a single experiment. We address previous concerns of employing FTICR MS to measure large macromolecular complexes by demonstrating the detection of complexes up to 1.8 MDa, and we demonstrate the efficacy of this technique for direct acquirement of sequence to higher-order structural information with several large complexes. We then summarize the unique functionalities of different activation/dissociation techniques. The platform expands the ability of MS to integrate proteomics and structural biology to provide insights into protein structure, function and regulation.

  11. Molecularly imprinted solid phase extraction for simultaneous determination of Δ9-tetrahydrocannabinol and its main metabolites by gas chromatography-mass spectrometry in urine samples.

    PubMed

    Nestić, Marina; Babić, Sandra; Pavlović, Dragana Mutavdžić; Sutlović, Davorka

    2013-09-10

    In presented paper analytical method based on solid-phase extraction using molecularly imprinted polymer and gas chromatography-mass spectrometry has been developed and validated for the confirmation of THC, THC-OH and THC-COOH in urine samples. Non-covalent molecularly imprinted polymers of THC-OH were prepared using different functional monomers (methacrylic acid, 4-vinylpyridine, and 2-hydroxyethyl methacrylate), ethylene glycol dimethacrylate as a cross-linker and 2,2'-azobis-isobutyronitrile as an initiator of radical polymerization. Analytes were extracted from urine samples using prepared polymer sorbent with highest binding selectivity and capability. Before extraction, urine samples were hydrolyzed with alkaline. Elution was performed with chloroform:ethyl acetate (60:40, v/v). Dry extracts were silylated with BSTFA+1% TMCS. Detection and quantification were performed using gas chromatography-mass spectrometry in single ion recording mode. The developed method was linear over the range from LOQ to 150 ng mL(-1) for all three analytes. For THC, THC-OH and THC-COOH LOD was 2.5, 1 and 1 ng mL(-1), and LOQ was 3, 2 and 2 ng mL(-1), respectively. The precision, accuracy, recovery and matrix effect were investigated at 5, 25 and 50 ng mL(-1). In the investigated concentration range recoveries were 71.9% for THC, 78.6% for THC-OH and 75.2% for THC-COOH. Matrix effect was not significant (<10%) for all analytes in the concentration range from 5 ng mL(-1) to 50 ng mL(-1). Extraction recovery on non-imprinted polymer was relatively high indicating high non-specific binding. Optimized and validated method was applied to 15 post-mortem urine samples. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

  12. Seasonal variations in the profile of main phospholipids in Mytilus galloprovincialis mussels: A study by hydrophilic interaction liquid chromatography-electrospray ionization Fourier transform mass spectrometry.

    PubMed

    Facchini, Laura; Losito, Ilario; Cataldi, Tommaso R I; Palmisano, Francesco

    2018-01-01

    A systematic characterization of phosphatidylcholines and phosphatidylethanolamines in mussels of sp Mytilus galloprovincialis was performed by high-efficiency hydrophilic interaction liquid chromatography combined with electrospray ionization and Fourier transform mass spectrometry (FTMS), based on a quadrupole-Orbitrap hybrid spectrometer. The FTMS/MS experiments under high collisional energy dissociation conditions, complemented by low-energy collisionally induced dissociation MS n (n = 2,3) experiments, performed in a linear ion trap mass spectrometer, were exploited for structural elucidation purposes. The described approach led to an unprecedented characterization of the mussel phospholipidome, with 185 phosphatidylcholines and 131 phosphatidylethanolamines species recognized, distributed among diacylic, plasmanylic, and plasmenylic forms. This was the starting point for the evaluation of the effects of season (in particular, of sea temperature) on the profile of those phospholipids. To this aim, a set of mussel samples retrieved from commercial sources in different periods of the year was considered. Principal component analysis revealed a clear separation between samples collected in periods characterized by cold, intermediate, or warm sea temperatures, respectively. In particular, an enrichment in phospholipids containing unsaturated side chains was observed in mussels collected from cold seawaters (winter-early spring), thus confirming the general model previously elaborated to explain the adaptation of marine invertebrates, including some bivalve molluscs, to low temperatures. On the other hand, relevant levels of plasma(e)nylic and acylic phospholipids bearing either saturated or non-methylene-interrupted side chains were found in mussels collected in warm seawaters (typical of summer and early autumn, at Italian latitudes). This finding opened interesting perspectives towards the development of strategies able to prevent global warming-related mussel

  13. Determination of ketamine and its main metabolites by liquid chromatography coupled to tandem mass spectrometry in pig plasma: Comparison of extraction methods.

    PubMed

    Ramiole, Cindy; D'Hayer, Benoit; Boudy, Vincent; Legagneux, Josette; Fonsart, Julien; Houzé, Pascal

    2017-11-30

    A rapid, sensitive and specific liquid chromatography coupled to tandem mass spectrometry method was developed for the simultaneous quantification pig plasma of ketamine and its two principal metabolites, norketamine and dehydronorketamine. Three extraction procoles were assessed including acetonitrile precipitation, Oase™ microplate extraction, and liquid-liquid extraction. Oase™ microplate extraction induced no significant matrix effect, important signal/noise ratio and good recoveries, ranging from 82 to 87% for the considered compounds. Using this extraction procedure, the assay was linear in the dynamic range 10-3000ng/mL (R 2 >0.99) regardless of the analytes. Intra- and inter-day accuracies were less than 12% for all compounds and intra- and inter-day precisions expressed as RSD were within <9.9%. Samples were stable in different storage conditions. High ketamine, norketamine and dehydronorketamine concentrations up to 15,000ng/mL can be determined with good precision using appropriate sample dilution. The assay was successfully applied to pig plasma samples to determine the pharmacokinetics of ketamine and the consecutive metabolites after buccal administration of a 4mg/kg ketamine base solutions. Copyright © 2017 Elsevier B.V. All rights reserved.

  14. Determination of tetrabromobisphenol-A/S and their main derivatives in water samples by high performance liquid chromatography coupled with inductively coupled plasma tandem mass spectrometry.

    PubMed

    Liu, Lihong; Liu, Aifeng; Zhang, Qinghua; Shi, Jianbo; He, Bin; Yun, Zhaojun; Jiang, Guibin

    2017-05-12

    As the most widely used brominated flame retardants (BFRs), Tetrabromobisphenol-A (TBBPA) as well as its alternative Tetrabromobisphenol-S (TBBPS) and their derivatives have raised wide concerns due to their adverse effects on human health and hence the sensitive detection of those BFRs was urgently needed. Herein, a novel analytical method based on high-performance liquid chromatography (HPLC) coupled with inductively coupled plasma tandem mass spectrometry (ICP-MS/MS) has been developed for the determination of TBBPA/S and their derivatives, including TBBPA-bis(2-hydroxyethyl ether) (TBBPA-BHEE), TBBPA-bis(allylether) (TBBPA-BAE), TBBPA-bis(glycidyl ether) (TBBPA-BGE), TBBPA-bis(2,3-dibromopropyl ether) (TBBPA-BDBPE) and TBBPS-bis(2,3-dibromopropyl ether) (TBBPS-BDBPE) in water samples. After optimization, the TBBPA/S and their derivatives, especially the TBBPA-BAE and TBBPA-BDBPE were simultaneously and sensitively quantified by determination of bromine (m/z=79) by using the ICP-MS. The instrument limits of detection (LODs) for the TBBPA, TBBPA-BHEE, TBBPA-BGE, TBBPA-BAE, TBBPA-BDBPE, TBBPS and TBBPS-BDBPE were determined to be 0.12, 0.14, 0.19, 0.14, 0.12, 0.17 and 0.13μgL -1 , respectively, which was close to or much better than the reported methods. The relative standard deviations (RSDs, n=5) of peak area and retention time were better than 2.2% and 0.2% for intra-day analysis, indicating good repeatability and high precision. The proposed method had been successfully applied for the analysis of TBBPA/S and their derivatives in water samples with satisfactory recoveries (67.7%-113%). Copyright © 2017 Elsevier B.V. All rights reserved.

  15. TEMPO-Assisted Free Radical-Initiated Peptide Sequencing Mass Spectrometry (FRIPS MS) in Q-TOF and Orbitrap Mass Spectrometers: Single-Step Peptide Backbone Dissociations in Positive Ion Mode

    NASA Astrophysics Data System (ADS)

    Jang, Inae; Lee, Sun Young; Hwangbo, Song; Kang, Dukjin; Lee, Hookeun; Kim, Hugh I.; Moon, Bongjin; Oh, Han Bin

    2017-01-01

    The present study demonstrates that one-step peptide backbone fragmentations can be achieved using the TEMPO [2-(2,2,6,6-tetramethyl piperidine-1-oxyl)]-assisted free radical-initiated peptide sequencing (FRIPS) mass spectrometry in a hybrid quadrupole time-of-flight (Q-TOF) mass spectrometer and a Q-Exactive Orbitrap instrument in positive ion mode, in contrast to two-step peptide fragmentation in an ion-trap mass spectrometer (reference Anal. Chem. 85, 7044-7051 (30)). In the hybrid Q-TOF and Q-Exactive instruments, higher collisional energies can be applied to the target peptides, compared with the low collisional energies applied by the ion-trap instrument. The higher energy deposition and the additional multiple collisions in the collision cell in both instruments appear to result in one-step peptide backbone dissociations in positive ion mode. This new finding clearly demonstrates that the TEMPO-assisted FRIPS approach is a very useful tool in peptide mass spectrometry research.

  16. Characterization of the venom from the Australian scorpion Urodacus yaschenkoi: Molecular mass analysis of components, cDNA sequences and peptides with antimicrobial activity.

    PubMed

    Luna-Ramírez, Karen; Quintero-Hernández, Veronica; Vargas-Jaimes, Leonel; Batista, Cesar V F; Winkel, Kenneth D; Possani, Lourival D

    2013-03-01

    The Urodacidae scorpions are the most widely distributed of the four families in Australia and represent half of the species in the continent, yet their venoms remain largely unstudied. This communication reports the first results of a proteome analysis of the venom of the scorpion Urodacus yaschenkoi performed by mass fingerprinting, after high performance liquid chromatography (HPLC) separation. A total of 74 fractions were obtained by HPLC separation allowing the identification of approximately 274 different molecular masses with molecular weights varying from 287 to 43,437 Da. The most abundant peptides were those from 1 K Da and 4-5 K Da representing antimicrobial peptides and putative potassium channel toxins, respectively. Three such peptides were chemically synthesized and tested against Gram-positive and Gram-negative bacteria showing minimum inhibitory concentration in the low micromolar range, but with moderate hemolytic activity. It also reports a transcriptome analysis of the venom glands of the same scorpion species, undertaken by constructing a cDNA library and conducting random sequencing screening of the transcripts. From the resultant cDNA library 172 expressed sequence tags (ESTs) were analyzed. These transcripts were further clustered into 120 unique sequences (23 contigs and 97 singlets). The identified putative proteins can be assorted in several groups, such as those implicated in common cellular processes, putative neurotoxins and antimicrobial peptides. The scorpion U. yaschenkoi is not known to be dangerous to humans and its venom contains peptides similar to those of Opisthacanthus cayaporum (antibacterial), Scorpio maurus palmatus (maurocalcin), Opistophthalmus carinatus (opistoporines) and Hadrurus gerstchi (scorpine-like molecules), amongst others. Copyright © 2012 Elsevier Ltd. All rights reserved.

  17. Species Identification of Archaeological Skin Objects from Danish Bogs: Comparison between Mass Spectrometry-Based Peptide Sequencing and Microscopy-Based Methods

    PubMed Central

    Brandt, Luise Ørsted; Schmidt, Anne Lisbeth; Mannering, Ulla; Sarret, Mathilde; Kelstrup, Christian D.; Olsen, Jesper V.; Cappellini, Enrico

    2014-01-01

    Denmark has an extraordinarily large and well-preserved collection of archaeological skin garments found in peat bogs, dated to approximately 920 BC – AD 775. These objects provide not only the possibility to study prehistoric skin costume and technologies, but also to investigate the animal species used for the production of skin garments. Until recently, species identification of archaeological skin was primarily performed by light and scanning electron microscopy or the analysis of ancient DNA. However, the efficacy of these methods can be limited due to the harsh, mostly acidic environment of peat bogs leading to morphological and molecular degradation within the samples. We compared species assignment results of twelve archaeological skin samples from Danish bogs using Mass Spectrometry (MS)-based peptide sequencing, against results obtained using light and scanning electron microscopy. While it was difficult to obtain reliable results using microscopy, MS enabled the identification of several species-diagnostic peptides, mostly from collagen and keratins, allowing confident species discrimination even among taxonomically close organisms, such as sheep and goat. Unlike previous MS-based methods, mostly relying on peptide fingerprinting, the shotgun sequencing approach we describe aims to identify the complete extracted ancient proteome, without preselected specific targets. As an example, we report the identification, in one of the samples, of two peptides uniquely assigned to bovine foetal haemoglobin, indicating the production of skin from a calf slaughtered within the first months of its life. We conclude that MS-based peptide sequencing is a reliable method for species identification of samples from bogs. The mass spectrometry proteomics data were deposited in the ProteomeXchange Consortium with the dataset identifier PXD001029. PMID:25260035

  18. Physicochemical variations in atmospheric aerosols recorded at sea onboard the Atlantic-Mediterranean 2008 Scholar Ship cruise (Part I): Particle mass concentrations, size ratios, and main chemical components

    NASA Astrophysics Data System (ADS)

    Pérez, Noemí; Moreno, Teresa; Querol, Xavier; Alastuey, Andrés; Bhatia, Ravinder; Spiro, Baruch; Hanvey, Melanie

    2010-07-01

    We report on ambient atmospheric aerosols present at sea during the Atlantic-Mediterranean voyage of Oceanic II (The Scholar Ship) in spring 2008. A record was obtained of hourly PM 10, PM 2.5, and PM 1 particle size fraction concentrations and 24-h filter samples for chemical analysis which allowed for comparison between levels of crustal particles, sea spray, total carbon, and secondary inorganic aerosols. On-board monitoring was continuous from the equatorial Atlantic to the Straits of Gibraltar, across the Mediterranean to Istanbul, and back via Lisbon to the English Channel. Initially clean air in the open Atlantic registered PM 10 levels <10 μg m -3 but became progressively polluted by increasingly coarse PM as the ship approached land. Away from major port cities, the main sources of atmospheric contamination identified were dust intrusions from North Africa (NAF), smoke plumes from biomass burning in sub-Saharan Africa and Russia, industrial sulphate clouds and other regional pollution sources transported from Europe, sea spray during rough seas, and plumes emanating from islands. Under dry NAF intrusions PM 10 daily mean levels averaged 40-60 μg m -3 (30-40 μg m -3 PM 2.5; c. 20 μg m -3 PM 1), peaking briefly to >120 μg m -3 (hourly mean) when the ship passed through curtains of higher dust concentrations amassed at the frontal edge of the dust cloud. PM 1/PM 10 ratios ranged from very low during desert dust intrusions (0.3-0.4) to very high during anthropogenic pollution plume events (0.8-1).

  19. CSI 2264: Simultaneous optical and X-ray variability in pre-main sequence stars. I. Time resolved X-ray spectral analysis during optical dips and accretion bursts in stars with disks

    NASA Astrophysics Data System (ADS)

    Guarcello, M. G.; Flaccomio, E.; Micela, G.; Argiroffi, C.; Sciortino, S.; Venuti, L.; Stauffer, J.; Rebull, L.; Cody, A. M.

    2017-06-01

    Context. Pre-main sequence stars are variable sources. The main mechanisms responsible for their variability are variable extinction, unsteady accretion, and rotational modulation of both hot and dark photospheric spots and X-ray-active regions. In stars with disks, this variability is related to the morphology of the inner circumstellar region (≤0.1 AU) and that of the photosphere and corona, all impossible to be spatially resolved with present-day techniques. This has been the main motivation for the Coordinated Synoptic Investigation of NGC 2264, a set of simultaneous observations of NGC 2264 with 15 different telescopes. Aims: In this paper, we focus on the stars with disks. We analyze the X-ray spectral properties extracted during optical bursts and dips in order to unveil the nature of these phenomena. Stars without disks are studied in a companion paper. Methods: We analyze simultaneous CoRoT and Chandra/ACIS-I observations to search for coherent optical and X-ray flux variability in stars with disks. Then, stars are analyzed in two different samples. In stars with variable extinction, we look for a simultaneous increase of optical extinction and X-ray absorption during the optical dips; in stars with accretion bursts, we search for soft X-ray emission and increasing X-ray absorption during the bursts. Results: We find evidence for coherent optical and X-ray flux variability among the stars with variable extinction. In 9 of the 24 stars with optical dips, we observe a simultaneous increase of X-ray absorption and optical extinction. In seven dips, it is possible to calculate the NH/AV ratio in order to infer the composition of the obscuring material. In 5 of the 20 stars with optical accretion bursts, we observe increasing soft X-ray emission during the bursts that we associate to the emission of accreting gas. It is not surprising that these properties are not observed in all the stars with dips and bursts, since favorable geometric configurations are

  20. Eukaryotic Plankton Species Diversity in the Western Channel of the Korea Strait using 18S rDNA Sequences and its Implications for Water Masses

    NASA Astrophysics Data System (ADS)

    Lee, Sang-Rae; Song, Eun Hye; Lee, Tongsup

    2018-03-01

    Organisms entering the East Sea (Sea of Japan) through the Korea Strait, together with water, salt, and energy, affect the East Sea ecosystem. In this study, we report on the biodiversity of eukaryotic plankton found in the Western Channel of the Korea Strait for the first time using small subunit ribosomal RNA gene (18S rDNA) sequences. We also discuss the characteristics of water masses and their physicochemical factors. Diverse taxonomic groups were recovered from 18S rDNA clone libraries, including putative novel, higher taxonomic entities affiliated with Cercozoa, Raphidophyceae, Picozoa, and novel marine Stramenopiles. We also found that there was cryptic genetic variation at both the intraspecific and interspecific levels among arthropods, diatoms, and green algae. Specific plankton assemblages were identified at different sampling depths and they may provide useful information that could be used to interpret the origin and the subsequent mixing history of the water masses that contribute to the Tsushima Warm Current waters. Furthermore, the biological information highlighted in this study may help improve our understanding about the complex water mass interactions that were highlighted in the Korea Strait.

  1. Cysteine shotgun–mass spectrometry (CS-MS) reveals dynamic sequence of protein structure changes within mutant and stressed cells

    PubMed Central

    Krieger, Christine C.; An, Xiuli; Tang, Hsin-Yao; Mohandas, Narla; Speicher, David W.; Discher, Dennis E.

    2011-01-01

    Questions of if and when protein structures change within cells pervade biology and include questions of how the cytoskeleton sustains stresses on cells—particularly in mutant versus normal cells. Cysteine shotgun labeling with fluorophores is analyzed here with mass spectrometry of the spectrin–actin membrane skeleton in sheared red blood cell ghosts from normal and diseased mice. Sheared samples are compared to static samples at 37 °C in terms of cell membrane intensity in fluorescence microscopy, separated protein fluorescence, and tryptic peptide modification in liquid chromatography–tandem mass spectrometry (LC-MS/MS). Spectrin labeling proves to be the most sensitive to shear, whereas binding partners ankyrin and actin exhibit shear thresholds in labeling and both the ankyrin-binding membrane protein band 3 and the spectrin–actin stabilizer 4.1R show minimal differential labeling. Cells from 4.1R-null mice differ significantly from normal in the shear-dependent labeling of spectrin, ankyrin, and band 3: Decreased labeling of spectrin reveals less stress on the mutant network as spectrin dissociates from actin. Mapping the stress-dependent labeling kinetics of α- and β-spectrin by LC-MS/MS identifies Cys in these antiparallel chains that are either force-enhanced or force-independent in labeling, with structural analyses indicating the force-enhanced sites are sequestered either in spectrin’s triple-helical domains or in interactions with actin or ankyrin. Shear-sensitive sites identified comprehensively here in both spectrin and ankyrin appear consistent with stress relief through forced unfolding followed by cytoskeletal disruption. PMID:21527722

  2. Pond Crash Forensics: Presumptive identification of pond crash agents by next generation sequencing in replicate raceway mass cultures of Nannochloropsis salina

    DOE PAGES

    Carney, Laura T.; Wilkenfeld, Joshua S.; Lane, Pam D.; ...

    2016-06-02

    Productivity of algal mass culture can be severely reduced by contaminating organisms. It is, therefore, important to identify contaminants, determine their effect on productivity and, ultimately, develop countermeasures against such contamination. In this paper, we utilized microbiome analysis by second-generation sequencing of small subunit rRNA genes to characterize the predator and pathogen burden of open raceway cultures of Nannochloropsis salina. Samples were analyzed from replicate raceways before and after crashes. In one culture cycle, we identified two algivorous species, the rotifer Brachionus and gastrotrich Chaetonotus, the presence of which may have contributed to the loss of algal biomass. In themore » second culture cycle, the raceways were treated with hypochlorite in an unsuccessful attempt to interdict the crash. Finally, our analyses were shown to be an effective strategy for the identification of the biological contaminants and the characterization of intervention strategies.« less

  3. An improved procedure, involving mass spectrometry, for N-terminal amino acid sequence determination of proteins which are N alpha-blocked.

    PubMed Central

    Rose, K; Kocher, H P; Blumberg, B M; Kolakofsky, D

    1984-01-01

    A modification to a previously described procedure [Gray & del Valle (1970) Biochemistry 9, 2134-2137; Rose, Simona & Offord (1983) Biochem. J. 215, 261-272] for mass-spectral identification of the N-terminal regions of proteins is shown to be useful in cases where the N-terminus is blocked. Three proteins were studied: vesicular-stomatitis-virus N protein, Sendai-virus NP protein, and a rabbit immunoglobulin lambda-light chain. These proteins, found to be blocked at the N-terminus with either the acetyl group or a pyroglutamic acid residue, had all failed to yield to attempted Edman degradation, in one case even after attempted enzymic removal of the pyroglutamic acid residue. The N-terminal regions of all three proteins were sequenced by using the new procedure. PMID:6421284

  4. A sensitive mass spectrometric method for hypothesis-driven detection of peptide post-translational modifications: multiple reaction monitoring-initiated detection and sequencing (MIDAS).

    PubMed

    Unwin, Richard D; Griffiths, John R; Whetton, Anthony D

    2009-01-01

    The application of a targeted mass spectrometric workflow to the sensitive identification of post-translational modifications is described. This protocol employs multiple reaction monitoring (MRM) to search for all putative peptides specifically modified in a target protein. Positive MRMs trigger an MS/MS experiment to confirm the nature and site of the modification. This approach, termed MIDAS (MRM-initiated detection and sequencing), is more sensitive than approaches using neutral loss scanning or precursor ion scanning methodologies, due to a more efficient use of duty cycle along with a decreased background signal associated with MRM. We describe the use of MIDAS for the identification of phosphorylation, with a typical experiment taking just a couple of hours from obtaining a peptide sample. With minor modifications, the MIDAS method can be applied to other protein modifications or unmodified peptides can be used as a MIDAS target.

  5. High quality draft genome sequence of Leucobacter chironomi strain MM2LBT (DSM 19883T) isolated from a Chironomus sp. egg mass

    DOE PAGES

    Laviad, Sivan; Lapidus, Alla; Copeland, Alex; ...

    2015-05-08

    Leucobacter chironomi strain MM2LBT (Halpern et al., Int J Syst Evol Microbiol 59:665-70 2009) is a Gram-positive, rod shaped, non-motile, aerobic, chemoorganotroph bacterium. L. chironomi belongs to the family Microbacteriaceae, a family within the class Actinobacteria. Strain MM2LBT was isolated from a chironomid (Diptera; Chironomidae) egg mass that was sampled from a waste stabilization pond in northern Israel. In a phylogenetic tree based on 16S rRNA gene sequences, strain MM2LBT formed a distinct branch within the radiation encompassing the genus Leucobacter. Here we describe the features of this organism, together with the complete genome sequence and annotation. We find thatmore » the DNA GC content is 69.90%. The chromosome length is 2,964,712 bp. It encodes 2,690 proteins and 61 RNA genes. L. chironomi genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project.« less

  6. The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra.

    PubMed

    Shilov, Ignat V; Seymour, Sean L; Patel, Alpesh A; Loboda, Alex; Tang, Wilfred H; Keating, Sean P; Hunter, Christie L; Nuwaysir, Lydia M; Schaeffer, Daniel A

    2007-09-01

    The Paragon Algorithm, a novel database search engine for the identification of peptides from tandem mass spectrometry data, is presented. Sequence Temperature Values are computed using a sequence tag algorithm, allowing the degree of implication by an MS/MS spectrum of each region of a database to be determined on a continuum. Counter to conventional approaches, features such as modifications, substitutions, and cleavage events are modeled with probabilities rather than by discrete user-controlled settings to consider or not consider a feature. The use of feature probabilities in conjunction with Sequence Temperature Values allows for a very large increase in the effective search space with only a very small increase in the actual number of hypotheses that must be scored. The algorithm has a new kind of user interface that removes the user expertise requirement, presenting control settings in the language of the laboratory that are translated to optimal algorithmic settings. To validate this new algorithm, a comparison with Mascot is presented for a series of analogous searches to explore the relative impact of increasing search space probed with Mascot by relaxing the tryptic digestion conformance requirements from trypsin to semitrypsin to no enzyme and with the Paragon Algorithm using its Rapid mode and Thorough mode with and without tryptic specificity. Although they performed similarly for small search space, dramatic differences were observed in large search space. With the Paragon Algorithm, hundreds of biological and artifact modifications, all possible substitutions, and all levels of conformance to the expected digestion pattern can be searched in a single search step, yet the typical cost in search time is only 2-5 times that of conventional small search space. Despite this large increase in effective search space, there is no drastic loss of discrimination that typically accompanies the exploration of large search space.

  7. Ranked solutions to a class of combinatorial optimizations—with applications in mass spectrometry based peptide sequencing and a variant of directed paths in random media

    NASA Astrophysics Data System (ADS)

    Doerr, Timothy P.; Alves, Gelio; Yu, Yi-Kuo

    2005-08-01

    Typical combinatorial optimizations are NP-hard; however, for a particular class of cost functions the corresponding combinatorial optimizations can be solved in polynomial time using the transfer matrix technique or, equivalently, the dynamic programming approach. This suggests a way to efficiently find approximate solutions-find a transformation that makes the cost function as similar as possible to that of the solvable class. After keeping many high-ranking solutions using the approximate cost function, one may then re-assess these solutions with the full cost function to find the best approximate solution. Under this approach, it is important to be able to assess the quality of the solutions obtained, e.g., by finding the true ranking of the kth best approximate solution when all possible solutions are considered exhaustively. To tackle this statistical issue, we provide a systematic method starting with a scaling function generated from the finite number of high-ranking solutions followed by a convergent iterative mapping. This method, useful in a variant of the directed paths in random media problem proposed here, can also provide a statistical significance assessment for one of the most important proteomic tasks-peptide sequencing using tandem mass spectrometry data. For directed paths in random media, the scaling function depends on the particular realization of randomness; in the mass spectrometry case, the scaling function is spectrum-specific.

  8. Cepheid Masses and Isochrones

    NASA Astrophysics Data System (ADS)

    Evans, N. R.

    Spectra of binary systems containing a Cepheid and a hot companion have been obtained with HST and IUE. Masses for 5 Cepheids are in agreement with evolutionary calculations using a moderate amount of convective overshoot. In another study of the HR diagram, half the systems with a Terminal Age Main Sequence (TAMS) companion do not match isochrones. Rotation in the companion is a possible explanation.

  9. Main Oxidizer Valve Design

    NASA Technical Reports Server (NTRS)

    Addona, Brad; Eddleman, David

    2015-01-01

    A developmental Main Oxidizer Valve (MOV) was designed by NASA-MSFC using additive manufacturing processes. The MOV is a pneumatically actuated poppet valve to control the flow of liquid oxygen to an engine's injector. A compression spring is used to return the valve to the closed state when pneumatic pressure is removed from the valve. The valve internal parts are cylindrical in shape, which lends itself to traditional lathe and milling operations. However, the valve body represents a complicated shape and contains the majority of the mass of the valve. Additive manufacturing techniques were used to produce a part that optimized mass and allowed for design features not practical with traditional machining processes.

  10. A Transect Across the Greater Himalayan Sequence of Bhutan: Evidence for a Minimum of 10 Ma of Ductile Flow Between the Outer South Tibetan Detachment and the Main Central Thrust

    NASA Astrophysics Data System (ADS)

    Daniel, C. G.; Kim, Y.; Grujic, D.; Hollister, L. S.

    2011-12-01

    Unique features of the Bhutan Himalaya are klippen of Tethyan sediments that overlie sillimanite and kyanite gneisses of the Greater Himalayan Sequence (GHS). The contact is strongly sheared, and referred to as the Outer South Tibetan Detachment (O-STD). Five such klippen are preserved in Bhutan and give insight into the Miocene displacement (ca. 24-11 Ma) of the STD system and on the evolution of the uppermost GHS. The base of the klippen are characterized by strongly sheared Grt-Bt±St±Sil schists of the Chekha Formation that appear to grade continuously upward into the black slates and weakly- to unmetamorphosed rocks of the Tethyan Sedimentary Sequence (TSS). Leucogranites intrude the Chekha Fm and the GHS in the vicinity of the contact, but not the TSS. New metamorphic, structural and geochronologic data from the western side of the Tang Chu klippe show that deformation and metamorphism within the Chekha Fm. were underway prior to 17.6 Ma, and that ductile shearing clearly overprints peak metamorphic mineral assemblages and continued until after 14 Ma. These data, when combined with previously reported data from adjacent klippen and the Main Central Thrust Zone to the south, provide a record of fairly continuous ductile flow of the GHS between 25-23 Ma and 13-11 Ma, at which point displacement transfers north of the klippen, to the Kakhtang thrust and the Inner-STD. Samples for this study were collected along a 10 km traverse and include four samples of Chekha Fm. and two samples of GHS collected across an ~ 80 m structural section that straddles the O-STD. The top of the interval starts in the Chekha Fm. and is characterized by the assemblage Grt-Bt-St, with a peak temperature near 600 °C. The base of the Chekha Fm. preserves Grt-Bt-Ms, with minor Sil, and peak temperatures near 650 °C; no evidence of partial melting is observed. The GHS samples are characterized by Grt-Bt-Ms-Sil and were partially melted. Peak metamorphic temperatures are estimated to be

  11. Adiabatic Betatron deceleration of ionospheric charged particles: a new explanation for (i) the rapid outflow of ionospheric O ions, and for (ii) the increase of plasma mass density observed in magnetospheric flux tubes during main phases of geomagnetic s

    NASA Astrophysics Data System (ADS)

    Lemaire, Joseph; Pierrard, Viviane; Darrouzet, Fabien

    2013-04-01

    Using European arrays of magnetometers and the cross-phase analysis to determine magnetic field line resonance frequencies, it has been found by Kale et al. (2009) that the plasma mass density within plasmaspheric flux tubes increased rapidly after the SSC of the Hallowe'en 2003 geomagnetic storms. These observations tend to confirm other independent experimental results, suggesting that heavy ion up-flow from the ionosphere is responsible for the observed plasma density increases during main phases of geomagnetic storms. The aim of our contribution is to point out that, during main phases, reversible Betatron effect induced by the increase of the southward Dst-magnetic field component (|Δ Bz|), diminishes slightly the perpendicular kinetic energy (W?) of charged particles spiraling along field lines. Furthermore, due to the conservation of the first adiabatic invariant (μ = Wm/ Bm) the mirror points of all ionospheric ions and electrons are lifted up to higher altitudes i.e. where the mirror point magnetic field (Bm) is slightly smaller. Note that the change of the mirror point altitude is given by: Δ hm = -1/3 (RE + hm) Δ Bm / Bm. It is independent of the ion species and it does not depend of their kinetic energy. The change of kinetic energy is determined by: Δ Wm = Wm Δ Bm / Bm. Both of these equations have been verified numerically by Lemaire et al. (2005; doi: 10.1016/S0273-1177(03)00099-1) using trajectory calculations in a simple time-dependant B-field model: i.e. the Earth's magnetic dipole, plus an increasing southward B-field component: i.e. the Dst magnetic field whose intensity becomes more and more negative during the main phase of magnetic storms. They showed that a variation of Bz (or Dst) by more than - 50 nT significantly increases the mirror point altitudes by more than 100 km which is about equal to scale height of the plasma density in the topside ionosphere where particles are almost collisionless (see Fig. 2 in Lemaire et al., 2005

  12. Ultrahigh-resolution Fourier transform ion cyclotron resonance mass spectrometry and tandem mass spectrometry for peptide de novo amino acid sequencing for a seven-protein mixture by paired single-residue transposed Lys-N and Lys-C digestion.

    PubMed

    Guan, Xiaoyan; Brownstein, Naomi C; Young, Nicolas L; Marshall, Alan G

    2017-01-30

    Bottom-up tandem mass spectrometry (MS/MS) is regularly used in proteomics to identify proteins from a sequence database. De novo sequencing is also available for sequencing peptides with relatively short sequence lengths. We recently showed that paired Lys-C and Lys-N proteases produce peptides of identical mass and similar retention time, but different tandem mass spectra. Such parallel experiments provide complementary information, and allow for up to 100% MS/MS sequence coverage. Here, we report digestion by paired Lys-C and Lys-N proteases of a seven-protein mixture: human hemoglobin alpha, bovine carbonic anhydrase 2, horse skeletal muscle myoglobin, hen egg white lysozyme, bovine pancreatic ribonuclease, bovine rhodanese, and bovine serum albumin, followed by reversed-phase nanoflow liquid chromatography, collision-induced dissociation, and 14.5 T Fourier transform ion cyclotron resonance mass spectrometry. Matched pairs of product peptide ions of equal precursor mass and similar retention times from each digestion are compared, leveraging single-residue transposed information with independent interferences to confidently identify fragment ion types, residues, and peptides. Selected pairs of product ion mass spectra for de novo sequenced protein segments from each member of the mixture are presented. Pairs of the transposed product ions as well as complementary information from the parallel experiments allow for both high MS/MS coverage for long peptide sequences and high confidence in the amino acid identification. Moreover, the parallel experiments in the de novo sequencing reduce false-positive matches of product ions from the single-residue transposed peptides from the same segment, and thereby further improve the confidence in protein identification. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

  13. Global molecular genetic analysis of porcine circovirus type 2 (PCV2) sequences confirms the presence of four main PCV2 genotypes and reveals a rapid increase of PCV2d.

    PubMed

    Xiao, Chao-Ting; Halbur, Patrick G; Opriessnig, Tanja

    2015-07-01

    The oldest porcine circovirus type 2 (PCV2) sequence dates back to 1962 and is among several hundreds of publicly available PCV2 sequences. Despite this resource, few studies have investigated the global genetic diversity of PCV2. To evaluate the phylogenetic relationship of PCV2 strains, 1680 PCV2 open reading frame 2 (ORF2) sequences were compared and analysed by methods of neighbour-joining, maximum-likelihood, Bayesian inference and network analysis. Four distinct clades were consistently identified and included PCV2a, PCV2b, PCV2c and PCV2d; the p-distance between PCV2d and PCV2b was 0.055±0.008, larger than the PCV2 genotype-definition cut-off of 0.035, supporting PCV2d as an independent genotype. Among the 1680 sequences, 278-285 (16.5-17 %) were classified as PCV2a, 1007-1058 (59.9-63 %) as PCV2b, three (0.2 %) as PCV2c and 322-323 (19.2 %) as PCV2d, with the remaining 12-78 sequences (0.7-4.6 %) classified as intermediate clades or strains by the various methods. Classification of strains to genotypes differed based on the number of sequences used for the analysis, indicating that sample size is important when determining classification and assessing PCV2 trends and shifts. PCV2d was initially identified in 1999 in samples collected in Switzerland, now appears to be widespread in China and has been present in North America since 2012. During 2012-2013, 37 % of all investigated PCV2 sequences from US pigs were classified as PCV2d and overall data analysis suggests an ongoing genotype shift from PCV2b towards PCV2d. The present analyses indicate that PCV2d emerged approximately 20 years ago.

  14. Comparative analysis of main bio-active components in the herb pair Danshen-Honghua and its single herbs by ultra-high performance liquid chromatography coupled to triple quadrupole tandem mass spectrometry.

    PubMed

    Qu, Cheng; Pu, Zong-Jin; Zhou, Gui-Sheng; Wang, Jun; Zhu, Zhen-Hua; Yue, Shi-Jun; Li, Jian-Ping; Shang, Li-Li; Tang, Yu-Ping; Shi, Xu-Qin; Liu, Pei; Guo, Jian-Ming; Sun, Jing; Tang, Zhi-Shu; Zhao, Jing; Zhao, Bu-Chang; Duan, Jin-Ao

    2017-09-01

    A sensitive, reliable, and powerful ultra-high performance liquid chromatography coupled to triple quadrupole tandem mass spectrometry method was developed for simultaneous quantification of the 15 main bio-active components including phenolic acids and flavonoids within 13 min for the first time. The proposed method was first reported and validated by good linearity (r 2  > 0.9975), limit of detection (1.12-7.01 ng/mL), limit of quantification (3.73-23.37 ng/mL), intra- and inter-day precisions (RSD ≤ 1.92%, RSD ≤ 2.45%), stability (RSD ≤ 5.63%), repeatability (RSD ≤ 4.34%), recovery (96.84-102.12%), and matrix effects (0.92-1.02). The established analytical methodology was successfully applied to comparative analysis of main bio-active components in the herb pair Danshen-Honghua and its single herbs. Compared to the single herb, the content of most flavonoid glycosides was remarkably increased in their herb pair, and main phenolic acids were decreased, conversely. The content changes of the main components in the herb pair supported the synergistic effects on promoting blood circulation and removing blood stasis. The results provide a scientific basis and reference for the quality control of Danshen-Honghua herb pair and the drug interactions based on variation of bio-active components in herb pairs. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  15. Investigation of the Effect of Rice Wine on the Metabolites of the Main Components of Herbal Medicine in Rat Urine by Ultrahigh-Performance Liquid Chromatography-Quadrupole/Time-of-Flight Mass Spectrometry: A Case Study on Cornus officinalis.

    PubMed

    Cao, Gang; Cai, Hao; Yue, Xianke; Tu, Sicong; Cai, Baochang; Xu, Zhiwei

    2013-01-01

    Ultrahigh-performance liquid chromatography-quadrupole/time-of-flight mass spectrometry (UPLC-QTOF/MS) was developed for rapid and sensitive analysis of the effect of rice wine on the metabolites of the main components of herbal medicine in rat urine. Using Cornus officinalis as a model of herbal medicine, the metabolite profiles of crude and processed (steaming the crude drug presteeped in rice wine) Cornus officinalis extracts in rat urine were investigated. The metabolites of Cornus officinalis were identified by using dynamic adjustment of the fragmentor voltage to produce structure-relevant fragment ions. In this work, we identified the parent compounds and metabolites of crude and processed Cornus officinalis in rats. In total, three parent compounds and seventeen new metabolites of Cornus officinalis were found in rats. The contents of the parent compounds and metabolites in vivo varied significantly after intragastric (i.g.) administration of aqueous extracts of crude and processed Cornus officinalis. Data from this study suggests that UPLC-QTOF/MS could be used as a potential tool for uncovering the effects of excipients found in the metabolites of the main components of herbal medicine, in vivo, to predict and discover the processing mechanisms of herbal medicine.

  16. Neuropeptides of the beetle, Tenebrio molitor identified using MALDI-TOF mass spectrometry and deduced sequences from the Tribolium castaneum genome.

    PubMed

    Weaver, Robert J; Audsley, Neil

    2008-02-01

    Four neuropeptides were identified from the brain and corpora cardiaca-corpora allata (CC-CA) of the mealworm beetle Tenebrio molitor using matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) and information derived from the genome of the red flour beetle, Tribolium castaneum. Leucomyosuppressin (a FLRFamide), previously associated with cockroaches, but also subsequently identified from honey bee seen as a prominent peptide in both brain and CC-CA of T.molitor. A coding sequence for this peptide is found in the genome of T. castaneum. In addition, three FXPRLamides (pyrokinins), provisionally Tenmo-PK-1, Tenmo-PK-2 and Tenmo-PK-3 (HVVNFTPRLamide, SPPFAPRLamide, HL(I)SPFSPRLamide) were identified in both CC-CA and brain of T. molitor, again on the basis of predicted occurrence or similarity in T. castaneum. The sequence of Tenmo-PK-2 is the same as the PK-2 of the cockroach, Periplaneta americana. Other peptides readily predicted from the genome of T. castaneum include two AKH/HrTH peptides (Trica-AKH-1; pELNFSTDWamide and Trica-AKH-2; pELNFTPNWamide), the second of which is identical to Pyrap-AKH, an AKH-related peptide (Trica AKH-L; pEVTFSRDWPamide), two CRF-related diuretic factors (Trica-DH 37 and Trica-DH 47), the latter identical to Tenmo-DH 47, a putative antidiuretic factor (Trica-ADFb; LYDDGSYKPHVYGF-OH), two sulfakinin-like peptides (Trica-SK-1; pETSDDY(SO(3))GHLRFamide, and Trica SK-2; GEEPFDDYGHMRFamide), a potential allatostatin-C (Trica-AS; pESRYRQCYFNPISCF-OH), six allatostatin-B/myoinhibitory peptides (Trica-AST-B-1,2,3,4,5 & 6; DWNKDLHIWamide, GWNNLHEGWamide, AWQSLQSGWamide, NWGQFHGGWamide, SKWDNFRGSWamide, EPAWSNLGIWamide), an allatotropin-like peptide (Trica-ATL; GIEALKYHNMDLGTARGYamide), four 'CAPA'-related peptides (Trica-CAPA-1,2,3,4; NKLASVYALTPSLRVamide, RIGKMVSFPRIamide, PGANSGGMWFGPRLamide, SENFTPWAYIILNGEAPIIREVHYSPRLamide), proctolin (RYLPT), a potential SIFamide (Trica-SIFa; TYRKPPFNGSIFamide), an

  17. SNP markers tightly linked to root knot nematode resistance in grapevine (Vitis cinerea) identified by a genotyping-by-sequencing approach followed by Sequenom MassARRAY validation

    PubMed Central

    Morales, Norma B.; Moskwa, Sam; Clingeleffer, Peter R.; Thomas, Mark R.

    2018-01-01

    Plant parasitic nematodes, including root knot nematode Meloidogyne species, cause extensive damage to agriculture and horticultural crops. As Vitis vinifera cultivars are susceptible to root knot nematode parasitism, rootstocks resistant to these soil pests provide a sustainable approach to maintain grapevine production. Currently, most of the commercially available root knot nematode resistant rootstocks are highly vigorous and take up excess potassium, which reduces wine quality. As a result, there is a pressing need to breed new root knot nematode resistant rootstocks, which have no impact on wine quality. To develop molecular markers that predict root knot nematode resistance for marker assisted breeding, a genetic approach was employed to identify a root knot nematode resistance locus in grapevine. To this end, a Meloidogyne javanica resistant Vitis cinerea accession was crossed to a susceptible Vitis vinifera cultivar Riesling and results from screening the F1 individuals support a model that root knot nematode resistance, is conferred by a single dominant allele, referred as MELOIDOGYNE JAVANICA RESISTANCE1 (MJR1). Further, MJR1 resistance appears to be mediated by a hypersensitive response that occurs in the root apical meristem. Single nucleotide polymorphisms (SNPs) were identified using genotyping-by-sequencing and results from association and genetic mapping identified the MJR1 locus, which is located on chromosome 18 in the Vitis cinerea accession. Validation of the SNPs linked to the MJR1 locus using a Sequenom MassARRAY platform found that only 50% could be validated. The validated SNPs that flank and co-segregate with the MJR1 locus can be used for marker-assisted selection for Meloidogyne javanica resistance in grapevine. PMID:29462210

  18. SNP markers tightly linked to root knot nematode resistance in grapevine (Vitis cinerea) identified by a genotyping-by-sequencing approach followed by Sequenom MassARRAY validation.

    PubMed

    Smith, Harley M; Smith, Brady P; Morales, Norma B; Moskwa, Sam; Clingeleffer, Peter R; Thomas, Mark R

    2018-01-01

    Plant parasitic nematodes, including root knot nematode Meloidogyne species, cause extensive damage to agriculture and horticultural crops. As Vitis vinifera cultivars are susceptible to root knot nematode parasitism, rootstocks resistant to these soil pests provide a sustainable approach to maintain grapevine production. Currently, most of the commercially available root knot nematode resistant rootstocks are highly vigorous and take up excess potassium, which reduces wine quality. As a result, there is a pressing need to breed new root knot nematode resistant rootstocks, which have no impact on wine quality. To develop molecular markers that predict root knot nematode resistance for marker assisted breeding, a genetic approach was employed to identify a root knot nematode resistance locus in grapevine. To this end, a Meloidogyne javanica resistant Vitis cinerea accession was crossed to a susceptible Vitis vinifera cultivar Riesling and results from screening the F1 individuals support a model that root knot nematode resistance, is conferred by a single dominant allele, referred as MELOIDOGYNE JAVANICA RESISTANCE1 (MJR1). Further, MJR1 resistance appears to be mediated by a hypersensitive response that occurs in the root apical meristem. Single nucleotide polymorphisms (SNPs) were identified using genotyping-by-sequencing and results from association and genetic mapping identified the MJR1 locus, which is located on chromosome 18 in the Vitis cinerea accession. Validation of the SNPs linked to the MJR1 locus using a Sequenom MassARRAY platform found that only 50% could be validated. The validated SNPs that flank and co-segregate with the MJR1 locus can be used for marker-assisted selection for Meloidogyne javanica resistance in grapevine.

  19. Comparison of PCR-Electrospray Ionization Mass Spectrometry with 16S rRNA PCR and Amplicon Sequencing for Detection of Bacteria in Excised Heart Valves

    PubMed Central

    Peeters, Bart; Herijgers, Paul; Beuselinck, Kurt; Peetermans, Willy E.; Herregods, Marie-Christin

    2016-01-01

    Identification of the causative pathogen of infective endocarditis (IE) is crucial for adequate management and therapy. A broad-range PCR-electrospray ionization mass spectrometry (PCR-ESI-MS) technique was compared with broad-spectrum 16S rRNA PCR and amplicon sequencing (16S rRNA PCR) for the detection of bacterial pathogens in 40 heart valves obtained from 34 definite infective endocarditis patients according to the modified Duke criteria and six nonendocarditis patients. Concordance between the two molecular techniques was 98% for being positive or negative, 97% for concordant identification up to the genus level, and 77% for concordant identification up to the species level. Sensitivity for detecting the causative pathogen (up to the genus level) in excised heart valves was 88% for 16S rRNA PCR and 85% for PCR-ESI-MS; the specificity was 83% for both methods. The two molecular techniques were significantly more sensitive than valve culture (18%) and accurately identified bacteria in excised heart valves. In eight patients with culture-negative IE, the following results were obtained: concordant detection of Coxiella burnetii (n = 2), Streptococcus gallolyticus (n = 1), Propionibacterium acnes (n = 1), and viridans group streptococci (n = 1) by both molecular tests, detection of P. acnes by PCR-ESI-MS whereas the 16S rRNA PCR was negative (n = 1), and a false-negative result by both molecular techniques (n = 2). In one case of IE caused by viridans streptococci, PCR-ESI-MS was positive for Enterococcus spp. The advantages of PCR-ESI-MS compared to 16S rRNA PCR are its automated workflow and shorter turnaround times. PMID:27629895

  20. Surface exposure chronology of the Waimakariri glacial sequence in the Southern Alps of New Zealand: Implications for MIS-2 ice extent and LGM glacial mass balance

    NASA Astrophysics Data System (ADS)

    Rother, Henrik; Shulmeister, James; Fink, David; Alexander, David; Bell, David

    2015-11-01

    During the late Quaternary, the Southern Alps of New Zealand experienced multiple episodes of glaciation with large piedmont glaciers reaching the coastal plains in the west and expanding into the eastern alpine forelands. Here, we present a new 10Be exposure age chronology for a moraine sequence in the Waimakariri Valley (N-Canterbury), which has long been used as a reference record for correlating glacial events across New Zealand and the wider Southern Hemisphere. Our data indicate that the Waimakariri glacier reached its maximum last glaciation extent prior to ∼26 ka well before the global last glaciation maximum (LGM). This was followed by a gradual reduction in ice volume and the abandonment of the innermost LGM moraines at about 17.5 ka. Significantly, we find that during its maximum extent, the Waimakariri glacier overflowed the Avoca Plateau, previously believed to represent a mid-Pleistocene glacial surface (i.e. MIS 8). At the same time, the glacier extended to a position downstream of the Waimakariri Gorge, some 15 km beyond the previously mapped LGM ice limit. We use a simple steady-state mass balance model to test the sensitivity of past glacial accumulation to various climatic parameters, and to evaluate possible climate scenarios capable of generating the ice volume required to reach the full local-LGM extent. Model outcomes indicate that under New Zealand's oceanic setting, a cooling of 5 °C, assuming modern precipitation levels, or a cooling of 6.5 °C, assuming a one third reduction in precipitation, would suffice to drive the Waimakariri glacier to the eastern alpine forelands (Canterbury Plains). Our findings demonstrate that the scale of LGM glaciation in the Waimakariri Valley and adjacent major catchments, both in terms of ice volume and downvalley ice extent, has been significantly underestimated. Our observation that high-lying glacial surfaces, so far believed to represent much older glacial episodes, were glaciated during the LGM

  1. Clostridium sphenoides Chronic Osteomyelitis Diagnosed Via Matrix-Assisted Laser Desorption Ionization Time of Flight Mass Spectrometry, Conflicting With 16S rRNA Sequencing but Confirmed by Whole Genome Sequencing.

    PubMed

    Perkins, Matthew J; Snesrud, Erik; McGann, Patrick; Duplessis, Christopher A

    2017-01-01

    We report a case of successful treatment of chronic osteomyelitis (emanating from contaminated soil exposure) caused by Clostridium sphenoides, an organism infrequently identified as a cause of human infection and more saliently osteomyelitis (only 1 reported case in the literature). Additional impetus for reporting this case resides in the insights gained regarding pathogen identification exploiting sophisticated molecular platforms coupled to traditional microbial culture-based methods. The fastidious nature of cultivating anaerobic organisms required initial attempts at 16S rRNA sequencing to identify a Clostridium species (Clostridium celerecrescens). However, on exploiting matrix-assisted laser desorption ionization time of flight (MALDI TOF) technology, C. sphenoides was identified, and confirmed on whole genome sequencing. The discrepancies noted in the varying platforms require vigilance to seek complementary testing for conflicting results. Although highly accurate, the MALDI TOF and 16S rRNA sequencing platforms are not immune to false identification particularly in differentiating closely related organisms. More germane, whole genome sequencing should be entertained when conflicting results are obtained from MALDI TOF and 16S rRNA sequencing. Precise species and/or strain level identification can be clinically relevant as antimicrobial sensitivity profiles may be discrepant between closely related species influencing clinical outcomes. Thus, it is incumbent on us to strive to acquire the correct species characterization when resources allow to dictate optimal treatment. Reprint & Copyright © 2017 Association of Military Surgeons of the U.S.

  2. The total rate of mass return to the interstellar medium from red giants and planetary nebulae

    NASA Technical Reports Server (NTRS)

    Knapp, G. R.; Rauch, K. P.; Wilcots, E. M.

    1990-01-01

    High luminosity post main sequence stars are observed to be losing mass in large amounts into the interstellar medium. The various methods used to estimate individual and total mass loss rates are summarized. Current estimates give MT 0.3 - 0.6 solar mass per year for the whole Galaxy.

  3. Identification of short single disulfide-containing contryphans from the venom of cone snails using de novo mass spectrometry-based sequencing methods.

    PubMed

    Franklin, Jayaseelan Benjamin; Rajesh, Rajaian Pushpabai; Vinithkumar, Nambali Valsalan; Kirubagaran, Ramalingam

    2017-06-15

    We identified 12 short single disulfide-containing conopeptides from the venom of Conus coronatus, C. leopardus, C. lividus and C. zonatus. Interestingly, we detected the shortest contryphan sequence thus far characterized which contains only six amino acid residues. We also identified three distinct contryphan sequences of C. lividus without any proline residues and one sequence with an unusual post-translational modification (bromination of tryptophan). Furthermore, we characterized venom peptides of C. zonatus for the first time. Copyright © 2017 Elsevier Ltd. All rights reserved.

  4. Mass-losing red giants in open clusters

    NASA Technical Reports Server (NTRS)

    Jura, M.

    1987-01-01

    Mass-losing stars in open clusters with main-sequence turn-offs at intermediate mass have been searched for by using the IRAS data base. The absence of many strong 60 micron sources in open clusters implies that intermediate-mass stars lose much of their mass during an intense wind phase of rather short duration. For stars of about seven solar masses, this phase, if it exists at all, lasts for not much more than 100,000 yr. For stars of about four solar masses, the intense wind phase appears to last considerably less than 10 million yr; it may well last for less than a million yr.

  5. Sequencing and de novo assembly of visceral mass transcriptome of the critically endangered land snail Satsuma myomphala: Annotation and SSR discovery.

    PubMed

    Kang, Se Won; Patnaik, Bharat Bhusan; Hwang, Hee-Ju; Park, So Young; Chung, Jong Min; Song, Dae Kwon; Patnaik, Hongray Howrelia; Lee, Jae Bong; Kim, Changmu; Kim, Soonok; Park, Hong Seog; Park, Seung-Hwan; Park, Young-Su; Han, Yeon Soo; Lee, Jun Sang; Lee, Yong Seok

    2017-03-01

    Satsuma myomphala is critically endangered through loss of natural habitats, predation by natural enemies, and indiscriminate collection. It is a protected species in Korea but lacks genomic resources for an understanding of varied functional processes attributable to evolutionary su