Science.gov

Sample records for manured agricultural soils

  1. Occurrence of veterinary antibiotics and progesterone in broiler manure and agricultural soil in Malaysia.

    PubMed

    Ho, Yu Bin; Zakaria, Mohamad Pauzi; Latif, Puziah Abdul; Saari, Nazamid

    2014-08-01

    Repeated applications of animal manure as fertilizer are normal agricultural practices that may release veterinary antibiotics and hormones into the environment from treated animals. Broiler manure samples and their respective manure-amended agricultural soil samples were collected in selected locations in the states of Selangor, Negeri Sembilan and Melaka in Malaysia to identify and quantify veterinary antibiotic and hormone residues in the environment. The samples were analyzed using ultrasonic extraction followed by solid phase extraction (SPE) and liquid chromatography-tandem mass spectrometry (LC-MS/MS). The broiler manure samples were found to be contaminated with at least six target analytes, namely, doxycycline, enrofloxacin, flumequine, norfloxacin, trimethoprim and tylosin. These analytes were detected in broiler manure samples with maximum concentrations reaching up to 78,516 μg kg(-1) dry weight (DW) (doxycycline). For manure-amended agricultural soil samples, doxycycline and enrofloxacin residues were detected in every soil sample. The maximum concentration of antibiotic detected in soil was 1331 μg kg(-1) DW (flumequine). The occurrence of antibiotics and hormones in animal manure at high concentration poses a risk of contaminating agricultural soil via fertilization with animal manure. Some physico-chemical parameters such as pH, total organic carbon (TOC) and metal content played a considerable role in the fate of the target veterinary antibiotics and progesterone in the environment. It was suggested that these parameters can affect the adsorption of pharmaceuticals to solid environmental matrices.

  2. Aerobic composting reduces antibiotic resistance genes in cattle manure and the resistome dissemination in agricultural soils.

    PubMed

    Gou, Min; Hu, Hang-Wei; Zhang, Yu-Jing; Wang, Jun-Tao; Hayden, Helen; Tang, Yue-Qin; He, Ji-Zheng

    2017-09-08

    Composting has been suggested as a potential strategy to eliminate antibiotic residues and pathogens in livestock manure before its application as an organic fertilizer in agro-ecosystems. However, the impacts of composting on antibiotic resistance genes (ARGs) in livestock manure and their temporal succession following the application of compost to land are not well understood. We examined how aerobic composting affected the resistome profiles of cattle manure, and by constructing laboratory microcosms we compared the effects of manure and compost application to agricultural soils on the temporal succession of a wide spectrum of ARGs. The high-throughput quantitative PCR array detected a total of 144 ARGs across all the soil, manure and compost samples, with Macrolide-Lincosamide-Streptogramin B, aminoglycoside, multidrug, tetracycline, and β-lactam resistance as the most dominant types. Composting significantly reduced the diversity and relative abundance of ARGs and mobile genetic elements (MGEs) in the cattle manure. In the 120-day microcosm incubation, the diversity and abundance of ARGs in manure-treated soils were significantly higher than those in compost-treated soils at the beginning of the experiment. The level of antibiotic resistance rapidly declined over time in all manure- and compost-treated soils, coupled with similar temporal patterns of manure- and compost-derived bacterial communities as revealed by SourceTracker analysis. The network analysis revealed more intensive interactions/associations among ARGs and MGEs in manure-treated soils than in compost-treated soils, suggesting that mobility potential of ARGs was lower in soils amended with compost. Our results provide evidence that aerobic composting of cattle manure may be an effective approach to mitigate the risk of antibiotic resistance propagation associated with land application of organic wastes. Copyright © 2017 Elsevier B.V. All rights reserved.

  3. Sorption and transport of five sulfonamide antibiotics in agricultural soil and soil-manure systems.

    PubMed

    Wang, Na; Guo, Xinyan; Xu, Jing; Hao, Lijun; Kong, Deyang; Gao, Shixiang

    2015-01-01

    Animal manure application is a main spreading route of veterinary antibiotics in soil and groundwater. The sorption and leaching behavior of five commonly used sulfonamides in five typical soil and soil/manure mixtures from China were investigated in this study. Results showed that the empirical Freundlich equation fits well the sorption behavior of selected sulfonamides (r(2) was between 0.803 and 0.999, 1/n was between 0.68 and 1.44), and pH and soil organic carbon (OC) were the key impact factors to sorption and leaching. Addition of manure was found to increase the Kd values of sulfonamides in five different soils, following the rules that the more polar substances, the more increased extent of sorption after manure amendment (5.87 times for sulfadiazine with Log Kow = -0.09, and 2.49 times for sulfamethoxazole with Log Kow = 0.89). When the simulated rainfall amount reached 300 mL (180 mm), sulfonamides have high migration potential to the groundwater, especially in the soil with low OC and high pH. However, manure amendment increased the sorption capacity of sulfonamides in the top layer, thus it might play a role in decreasing the mobility of sulfonamides in soils. The systematic study would be more significant to assess the ecological risks and suggest considering the influence of manure amendment for the environmental fate of antibiotics.

  4. Characterizing and modeling of extensive atrazine elution tailing for stable manure-amended agricultural soil.

    PubMed

    Akyol, Nihat Hakan

    2015-01-01

    Non-ideal sorption and extensive elution tailing behavior of atrazine was evaluated for an agricultural soil with and without stable manure amendment (10% by weight). A series of laboratory experiments showed that the sorption of atrazine was described by rate-limited, nonlinear reversible processes (Freundlich isotherm) for both non-amended and amended soil. Non-ideal transport of atrazine exhibited extensive low concentration elution tailing due to the most likely organic carbon fraction in the soil. This tailing behavior was more pronounced and extensive for soil with 10% stable-manure amendment. Two-site transport modeling analyses including non-linear sorption and rate-limited sorption-desorption provided a reasonably good match to the atrazine breakthrough curves but were unable to match the long-term concentration tailing, even for non-amended soil. A mathematical model incorporating nonlinear, rate-limited sorption/desorption described by a continuous-distribution function was used to successfully simulate atrazine transport early-time breakthrough and long-term concentration tailing for both non-amended and amended soil conditions.

  5. Selected veterinary pharmaceuticals in agricultural water and soil from land application of animal manure.

    PubMed

    Song, Wenlu; Ding, Yunjie; Chiou, Cary T; Li, Hui

    2010-01-01

    Veterinary pharmaceuticals are commonly administered to animals for disease control, and added into feeds at subtherapeutic levels to improve feeding efficiency. As a result of these practices, a certain fraction of the pharmaceuticals are excreted into animal manures. Land application of these manures contaminates soils with the veterinary pharmaceuticals, which can subsequently lead to contamination of surface and groundwaters. Information on the occurrence and fate of pharmaceuticals in soil and water is needed to assess the potential for exposure of at-risk populations and the impacts on agricultural ecosystems. In this study, we investigated the occurrence and fate of four commonly used veterinary pharmaceuticals (amprolium, carbadox, monensin, and tylosin) in a farm in Michigan. Amprolium and monensin were frequently detected in nearby surface water, with concentrations ranging from several to hundreds of nanograms per liter, whereas tylosin or carbadox was rarely found. These pharmaceuticals were more frequently detected in surface runoff during nongrowing season (October to April) than during growing season (May to September). Pharmaceuticals resulting from postharvest manure application appeared to be more persistent than those from spring application. High concentrations of pharmaceuticals in soils were generally observed at the sites where the respective concentrations in surface water were also high. For monensin, the ratios of soil-sorbed to aqueous concentrations obtained from field samples were within the order of the distribution coefficients obtained from laboratory studies. These results suggest that soil is a reservoir for veterinary pharmaceuticals that can be disseminated to nearby surface water via desorption from soil, surface runoff, and soil erosion.

  6. Toxicity of synthetic chelators and metal availability in poultry manure amended Cd, Pb and As contaminated agricultural soil.

    PubMed

    Usman, Adel R A; Almaroai, Yaser A; Ahmad, Mahtab; Vithanage, Meththika; Ok, Yong Sik

    2013-11-15

    Chelating agents added to contaminated soils may increase solubility and phytoextraction efficiency of soil metals. However, they can create negative effects on soil biological quality. A 90-day incubation experiment was conducted to evaluate mixed effects of chelating agents and poultry manure on changes in available Cd, Pb and As, CO2-C efflux, microbial biomass C, dissolved organic C (DOC), and N mineralization in metal-polluted agricultural soil. Application of poultry manure resulted in a considerable increase in soil pH, DOC, CO2-C efflux, net N mineralization, net N nitrification, and microbial biomass C compared to those in unmanured soil. Availability of arsenic increased twice in manure amended soil due to changes in pH and DOC. However, adding poultry manure did not affect the concentrations of available Pb and Cd compared to those in control soil. Chelating agents increased CO2-C efflux, DOC, and metal availability but decreased microbial biomass C and net N mineralization. Maximum decrease in microbial biomass C, net N mineralization, and net N nitrification, was observed in EDTA applied soil possibly due to high metal availability to soil microorganisms. Overall results revealed that the application of synthetic chelators in combination with poultry manure enhances available As and demonstrates better environment for soil biota. Copyright © 2013 Elsevier B.V. All rights reserved.

  7. Soil Incubation Study to Assess the Impacts of Manure Application and Climate Change on Greenhouse Gas Emissions from Agricultural Soil

    NASA Astrophysics Data System (ADS)

    Schiavone, K.; Barbieri, L.; Adair, C.

    2015-12-01

    Agricultural fields in Vermont's Lake Champlain Basin have problems with the loss of nutrients due to runoff which creates eutrophic conditions in the lakes, ponds and rivers. In efforts to retain nitrogen and other nutrients in the soil farmers have started to inject manure rather than spraying it. Our understanding of the effects this might have on the volatilization of nitrogen into nitrous oxide is limited. Already, agriculture produces 69% of the total nitrous oxide emissions in the US. Understanding that climate change will affect the future of agriculture in Vermont, we set up a soil core incubation test to monitor the emissions of CO₂ and N₂O using a Photoacoustic Gas Sensor (PAS). Four 10 cm soil cores were taken from nine different fertilizer management plots in a No Till corn field; Three Injected plots, three Broadcast plots, and three Plow plots. Frozen soil cores were extracted in early April, and remained frozen before beginning the incubation experiment to most closely emulate three potential spring environmental conditions. The headspace was monitored over one week to get emission rates. This study shows that environmental and fertilizer treatments together do not have a direct correlation to the amount of CO₂ and N₂O emissions from agricultural soil. However, production of CO₂ was 26% more in warmer environmental conditions than in variable(freeze/thaw) environmental conditions. The injected fertilizer produced the most emissions, both CO₂ and N₂O. The total N₂O emissions from Injected soil cores were 2.2x more than from traditional broadcast manure cores. We believe this is likely due to the addition of rich organic matter under anaerobic soil conditions. Although, injected fertilizer is a better application method for reducing nutrient runoff, the global warming potential of N₂O is 298 times that of CO₂. With climate change imminent, assessing the harmful effects and benefits of injected fertilizer is a crucial next step in

  8. Long-term manure application effects on phosphorus speciation, kinetics and distribution in highly weathered agricultural soils.

    PubMed

    Abdala, Dalton Belchior; da Silva, Ivo Ribeiro; Vergütz, Leonardus; Sparks, Donald Lewis

    2015-01-01

    Phosphorus (P) K-edge XANES and Fe K-edge EXAFS spectroscopies along with sequential P chemical fractionation and desorption kinetics experiments, were employed to provide micro- and macro-scale information on the long-term fate of manure application on the solid-state speciation, kinetics and distribution of P in highly weathered agricultural soils of southern Brazil. Soil test P values ranged from 7.3 up to 16.5 times as much higher than the reference soil. A sharp increase in amorphous Fe and Al amounts were observed as an effect of the consecutive application of manures. Whereas our results showed that the P sorption capacity of some manured soils was not significantly affected, P risk assessment indices indicated that P losses should be expected, likely due to the excessive manure rates applied to the soils. The much higher contents of amorphous Fe and Al (hydr)oxides (55% and 80% increase with respect to the reference soil, respectively) in manured soils seem to have counterbalanced the inhibiting effect of soil organic matter on P sorption by creating additional P sorption sites. Accordingly, the newly created P sorbing surfaces were important to prevent an even larger P loss potential. Phosphorus K-edge XANES lent complimentary hints on the loss of crystallinity and transformation of originally present Fe-P minerals into poorly crystalline ones as an effect of manuring, whereas Fe K-edge EXAFS provided insights into the structural changes underwent in the soils upon manure application and soil management.

  9. Influence of swine manure application method on concentrations of methanogens and denitrifiers in agricultural soils

    USDA-ARS?s Scientific Manuscript database

    Although the majority of bacteria associated with manures are beneficial and/or innocuous, the potential for contamination of agricultural environments, livestock and crops with manure-borne pathogens necessitates greater knowledge of their persistence. Data that fill gaps in knowledge about importa...

  10. Fate of Mycobacterium avium subsp. paratuberculosis after application of contaminated dairy cattle manure to agricultural soils.

    PubMed

    Salgado, M; Collins, M T; Salazar, F; Kruze, J; Bölske, G; Söderlund, R; Juste, R; Sevilla, I A; Biet, F; Troncoso, F; Alfaro, M

    2011-03-01

    Details regarding the fate of Mycobacterium avium subsp. paratuberculosis (basonym, Mycobacterium paratuberculosis) after manure application on grassland are unknown. To evaluate this, intact soil columns were collected in plastic pipes (lysimeters) and placed under controlled conditions to test the effect of a loamy or sandy soil composition and the amount of rainfall on the fate of M. paratuberculosis applied to the soil surface with manure slurry. The experiment was organized as a randomized design with two factors and three replicates. M. paratuberculosis-contaminated manure was spread on the top of the 90-cm soil columns. After weekly simulated rainfall applications, water drainage samples (leachates) were collected from the base of each lysimeter and cultured for M. paratuberculosis using Bactec MGIT ParaTB medium and supplements. Grass was harvested, quantified, and tested from each lysimeter soil surface. The identity of all probable M. paratuberculosis isolates was confirmed by PCR for IS900 and F57 genetic elements. There was a lag time of 2 months after each treatment before M. paratuberculosis was found in leachates. The greatest proportions of M. paratuberculosis-positive leachates were from sandy-soil lysimeters in the manure-treated group receiving the equivalent of 1,000 mm annual rainfall. Under the higher rainfall regimen (2,000 mm/year), M. paratuberculosis was detected more often from lysimeters with loamy soil than sandy soil. Among all lysimeters, M. paratuberculosis was detected more often in grass clippings than in lysimeter leachates. At the end of the trial, lysimeters were disassembled and soil cultured at different depths, and we found that M. paratuberculosis was recovered only from the uppermost levels of the soil columns in the treated group. Factors associated with M. paratuberculosis presence in leachates were soil type and soil pH (P < 0.05). For M. paratuberculosis presence in grass clippings, only manure application showed a

  11. Stimulation of N2 O emission by manure application to agricultural soils may largely offset carbon benefits: a global meta-analysis.

    PubMed

    Zhou, Minghua; Zhu, Bo; Wang, Shijie; Zhu, Xinyu; Vereecken, Harry; Brüggemann, Nicolas

    2017-10-01

    Animal manure application as organic fertilizer does not only sustain agricultural productivity and increase soil organic carbon (SOC) stocks, but also affects soil nitrogen cycling and nitrous oxide (N2 O) emissions. However, given that the sign and magnitude of manure effects on soil N2 O emissions is uncertain, the net climatic impact of manure application in arable land is unknown. Here, we performed a global meta-analysis using field experimental data published in peer-reviewed journals prior to December 2015. In this meta-analysis, we quantified the responses of N2 O emissions to manure application relative to synthetic N fertilizer application from individual studies and analyzed manure characteristics, experimental duration, climate, and soil properties as explanatory factors. Manure application significantly increased N2 O emissions by an average 32.7% (95% confidence interval: 5.1-58.2%) compared to application of synthetic N fertilizer alone. The significant stimulation of N2 O emissions occurred following cattle and poultry manure applications, subsurface manure application, and raw manure application. Furthermore, the significant stimulatory effects on N2 O emissions were also observed for warm temperate climate, acid soils (pH < 6.5), and soil texture classes of sandy loam and clay loam. Average direct N2 O emission factors (EFs) of 1.87% and 0.24% were estimated for upland soils and rice paddy soils receiving manure application, respectively. Although manure application increased SOC stocks, our study suggested that the benefit of increasing SOC stocks as GHG sinks could be largely offset by stimulation of soil N2 O emissions and aggravated by CH4 emissions if, particularly for rice paddy soils, the stimulation of CH4 emissions by manure application was taken into account. © 2017 John Wiley & Sons Ltd.

  12. Bioaccumulation of pharmaceuticals and other anthropogenic waste indicators in earthworms from agricultural soil amended with biosolid or swine manure

    USGS Publications Warehouse

    Kinney, C.A.; Furlong, E.T.; Kolpin, D.W.; Burkhardt, M.R.; Zaugg, S.D.; Werner, S.L.; Bossio, J.P.; Benotti, M.J.

    2008-01-01

    Analysis of earthworms offers potential for assessing the transfer of organic anthropogenic waste indicators (AWIs) derived from land-applied biosolid or manure to biota. Earthworms and soil samples were collected from three Midwest agricultural fields to measure the presence and potential for transfer of 77 AWIs from land-applied biosolids and livestock manure to earthworms. The sites consisted of a soybean field with no amendments of human or livestock waste (Site 1), a soybean field amended with biosolids from a municipal wastewater treatment plant (Site 2), and a cornfield amended with swine manure (Site 3). The biosolid applied to Site 2 contained a diverse composition of 28 AWIs, reflecting the presence of human-use compounds. The swine manure contained 12 AWIs, and was dominated by biogenic sterols. Soil and earthworm samples were collected in the spring (about 30 days after soil amendment) and fall (140-155 days after soil amendment) at all field sites. Soils from Site 1 contained 21 AWIs and soil from Sites 2 and 3 contained 19 AWIs. The AWI profiles at Sites 2 and 3 generally reflected the relative composition of AWIs present in waste material applied. There were 20 AWIs detected in earthworms from Site 1 (three compounds exceeding concentrations of 1000 ??g/kg), 25 AWIs in earthworms from Site 2 (seven compounds exceeding concentrations of 1000 ??g/kg), and 21 AWIs in earthworms from Site 3 (five compounds exceeding concentrations of 1000 ??g/kg). A number of compounds thatwere present in the earthworm tissue were at concentrations less than reporting levels in the corresponding soil samples. The AWIs detected in earthworm tissue from the three field sites included pharmaceuticals, synthetic fragrances, detergent metabolites, polycyclic aromatic hydrocarbons (PAHs), biogenic sterols, disinfectants, and pesticides, reflecting a wide range of physicochemical properties. For those contaminants detected in earthworm tissue and soil, bioaccumulation factors

  13. Bioaccumulation of pharmaceuticals and other anthropogenic waste indicators in earthworms from agricultural soil amended with biosolid or swine manure.

    PubMed

    Kinney, Chad A; Furlong, Edward T; Kolpin, Dana W; Burkhardt, Mark R; Zaugg, Steven D; Werner, Stephen L; Bossio, Joseph P; Benotti, Mark J

    2008-03-15

    Analysis of earthworms offers potential for assessing the transfer of organic anthropogenic waste indicators (AWIs) derived from land-applied biosolid or manure to biota. Earthworms and soil samples were collected from three Midwest agricultural fields to measure the presence and potential for transfer of 77 AWIs from land-applied biosolids and livestock manure to earthworms. The sites consisted of a soybean field with no amendments of human or livestock waste (Site 1), a soybean field amended with biosolids from a municipal wastewater treatment plant (Site 2), and a cornfield amended with swine manure (Site 3). The biosolid applied to Site 2 contained a diverse composition of 28 AWls, reflecting the presence of human-use compounds. The swine manure contained 12 AWls, and was dominated by biogenic sterols. Soil and earthworm samples were collected in the spring (about30 days after soil amendment) and fall (140-155 days after soil amendment) at all field sites. Soils from Site 1 contained 21 AWIs and soil from Sites 2 and 3 contained 19 AWls. The AWI profiles at Sites 2 and 3 generally reflected the relative composition of AWls present in waste material applied. There were 20 AWls detected in earthworms from Site 1 (three compounds exceeding concentrations of 1000 microg/kg), 25 AWls in earthworms from Site 2 (seven compounds exceeding concentrations of 1000 microg/ kg), and 21 AWls in earthworms from Site 3 (five compounds exceeding concentrations of 1000 microg/kg). A number of compounds thatwere present in the earthworm tissue were at concentrations less than reporting levels in the corresponding soil samples. The AWIs detected in earthworm tissue from the three field sites included pharmaceuticals, synthetic fragrances, detergent metabolites, polycyclic aromatic hydrocarbons (PAHs), biogenic sterols, disinfectants, and pesticides, reflecting a wide range of physicochemical properties. For those contaminants detected in earthworm tissue and soil, bioaccumulation

  14. Practical survey on antibiotic-resistant bacterial communities in livestock manure and manure-amended soil.

    PubMed

    Yang, Qingxiang; Wang, Ruifei; Ren, Siwei; Szoboszlay, Marton; Moe, Luke A

    2016-01-01

    Through livestock manure fertilization, antibiotics, antibiotic-resistant bacteria and genes are transferred to agricultural soils, resulting in a high prevalence of antibiotic-resistant bacteria in the soil. It is not clear, however, whether a correlation exists between resistant bacterial populations in manure and manure-amended soil. In this work, we demonstrate that the prevalence of cephalexin-, amoxicillin-, kanamycin- and gentamicin-resistant bacteria as well as bacteria simultaneously resistant to all four antibiotics was much higher in manure-amended soils than in manure-free soil. 454-pyrosequencing indicated that the ARB and multiple antibiotic-resistant bacteria (MARB) in swine or chicken manure and manure-amended soil were mainly distributed among Sphingobacterium, Myroides, Enterococcus, Comamonas and unclassified Flavobacteriaceae. The genus Sphingobacterium was highly prevalent among ARB from swine manure and manure-amended soil, and was also the most dominant genus among MARB from chicken manure and manure-amended soil. Other dominant genera among ARB or MARB populations in manure samples, including Myroides, Enterococcus and Comamonas, could not be detected or were detected at very low relative abundance in manure-amended soil. The present study suggests the possibility of transfer of ARBs from livestock manures to soils and persistence of ARB in these environments.

  15. Inorganic fertilizer and poultry-litter manure amendments alter the soil microbial communities in agricultural systems

    USDA-ARS?s Scientific Manuscript database

    The effects of agricultural land management practices on soil prokaryotic diversity are not well described. We investigated three land usage systems (row cropped, ungrazed pasture, and cattle-grazed pasture) and two fertilizer systems (inorganic fertilizer or IF and poultry-litter or PL) and compare...

  16. Fractionation and analysis of veterinary antibiotics and their related degradation products in agricultural soils and drainage waters following swine manure amendment.

    PubMed

    Solliec, Morgan; Roy-Lachapelle, Audrey; Gasser, Marc-Olivier; Coté, Caroline; Généreux, Mylène; Sauvé, Sébastien

    2016-02-01

    The fate of antimicrobial active compound residues in the environment, and especially antibiotics used in swine husbandry are of particular interest for their potential toxicity and contribution to antibiotic resistance. The presence of relatively high concentrations of bioactive compounds has been reported in agricultural areas but few information is available on their degradation products. Veterinary antibiotics reach terrestrial environments through many routes, including application of swine manure to soils. The objectives of this project were first, to develop an analytical method able to quantify and identify veterinary antibiotics and their degradation products in manure, soil and water samples; and second, to study the distribution of these target compounds in soils and drainage waters. A brief evaluation of their potential toxicity in the environment was also made. In order to achieve these objectives, liquid chromatography coupled to high-resolution mass spectrometry was used for its ability to quantify contaminants with sensitivity and selectivity, and its capacity to identify degradation products. Samples of manure, soil and water came from a long-term experimental site where swine manure containing veterinary antibiotics has been applied for many years. In this study, tetracycline antibiotics were found at several hundred μg L(-1) in the swine manure slurry used for fertilization, several hundred of ng L(-1) in drainage waters and several ng g(-1) in soils, while degradation products were sometimes found at concentrations higher than the parent compounds. Copyright © 2015 Elsevier B.V. All rights reserved.

  17. Clinoptilolite zeolite influence on nitrogen in a manure-amended sandy agricultural soil

    USDA-ARS?s Scientific Manuscript database

    Development of best management practices can help improve inorganic nitrogen (N) availability to plants and reduce nitrate-nitrogen (NO3-N) leaching in soils. This study was conducted to determine the influence of the zeolite mineral clinoptilolite (CL) additions on NO3-N and ammonium-nitrogen (NH4-...

  18. Maturity and hygiene quality of composts and hygiene indicators in agricultural soil fertilised with municipal waste or manure compost.

    PubMed

    Tontti, Tiina; Heinonen-Tanski, Helvi; Karinen, Päivi; Reinikainen, Olli; Halinen, Arja

    2011-02-01

    Composts produced from municipal source separated biowaste (Biowaste), a mixture of biowaste and anaerobically digested sewage sludge (Biosludge) and cattle manure (Manure) were examined for their maturity and hygiene quality. The composts were applied to a potato crop in 2004 and to a barley nurse crop of forage ley in 2005 in a field experiment. Numbers of faecal coliforms, enterococci, clostridia and Salmonella in field soil were determined 2 weeks and 16 weeks after compost applications. Municipal compost batches chosen based on successful processing showed variable maturity during field application, and the need to evaluate compost maturity with multiple variables was confirmed. The numbers of faecal coliform were similar in all compost types, averaging 4.7 and 2.3 log( 10) CFU g(-1) in the first and second years, respectively. The highest number of enterococci was 5.2 log(10) CFU g(-1), found in Manure compost in the first year, while the highest clostridia numbers were found in Biosludge compost, averaging 4.0 log(10) CFU g(-1) over both years. Except for one case, less than 2.4 log(10) CFU g(-1) of faecal coliforms or clostridia were found in compost-fertilised soil, while the numbers of enterococci were mostly higher than in unfertilised soil (<4.2 or <3.2 log(10) CFU g(-1), respectively). No hygiene indicator bacteria were present in compost-fertilised potato at harvest. Overall, compost fertilisations caused rather small changes in the counts of hygiene indicators in the field environment.

  19. Applied manure research—looking forward to the benign roles of animal manure in agriculture and the environment

    USDA-ARS?s Scientific Manuscript database

    By definition, animal manure is discarded animal excreta and bedding materials usually applied to soils as a fertilizer for agricultural production. However, the impact of manure generation and disposal is far more than the role of organic fertilizers, even though the fertilizer function of animal m...

  20. Dairy manure applications and soil health implications

    USDA-ARS?s Scientific Manuscript database

    Dairy manure applications can potentially improve soil health by adding organic matter (OM) to the soil. However, intensive dairy manure applications can cause salt accumulations on arid, irrigated soils, impairing soil health, which can reduce crop growth and yield. Soil organic matter, a major c...

  1. Assessing the environmental availability of sulfamethoxazole and its acetylated metabolite in agricultural soils amended with compost and manure: an experimental and modeling study

    NASA Astrophysics Data System (ADS)

    Goulas, Anaïs; Sertillange, Nicolas; Garnier, Patricia; Dumény, Valérie; Bergheaud, Valérie; Benoit, Pierre; Haudin, Claire-Sophie

    2017-04-01

    The recycling of sludge compost and farmyard manure in agriculture can lead to the introduction of sulfonamide antibiotics and their acetylated metabolites into soils. The quality and the biodegradability of the exogenous organic matter (EOM) containing antibiotic residues is determinant for their environmental availability and fate in soils (Goulas et al., 2016). This study combined experimental and modeling approaches in order to: 1) assess the fraction of sulfamethoxazole (SMX) and N-acetyl-sulfamethoxazole (AcSMX) available in EOM-amended soils by using soft extractions (CaCl2, EDTA or cyclodextrin solutions) during a 28-day incubation; and 2) better understand the dynamics of sulfonamide residues in amended soils in connection with their availability and the mineralization of EOM organic matter thanks to the COP-Soil model (Geng et al. 2015). This model proposes several options to couple the biotransformation of organic pollutants (OP) with the decomposition of EOM in soil. The microbial degradation can be simulated by co-metabolism and specific-metabolism. The model also accounts for the formation of non-extractable residues (NER) via both physicochemical and microbial routes. The available fraction in both soil/EOM mixtures decreased from 56-96% and 31-63% initial 14C-activity for AcSMX and SMX, respectively, to reach 7-33% after 28 days. This high decrease in the first seven days was mainly due to the formation of NER that were more abundant in soil/manure mixtures than in the soil/compost ones. The three aqueous solutions differently extracted the available 14C-residues according to the incubation time, the EOM and the molecule. The mineralized fractions for both 14C-molecules were only 2-3% with a little more mineralization in the soil/manure mixtures than in the soil/compost. By using the COP-Soil model, the dynamics of EOM and OP were well described using parameter values specific to the organic matter mineralization, and this for the three soft

  2. Nitrous oxide fluxes from manure-amended soil under maize

    SciTech Connect

    Lessard, R.; Rochette, P.; Gregorich, E.G.

    1996-11-01

    Nitrous oxide (N{sub 2}O) emissions by agricultural soils are influenced by farming practices. The application of manure to cultivated land modifies soil microbial activity by supplying additional quantities of C and N and changing soil physical and chemical properties. Nitrous oxide fluxes at the surface of a soil under maize (Zea mays L.) amended with dairy cattle manure were measured from April to October 1993 using closed chambers. The manure application rates were 0, 56, and 112 Mg ha{sup {minus}1} corresponding to 0. 170, and 339 kg ha{sup {minus}1} of total N, respectively. Nitrate and NH{sub 4}{sup +} were measured in soil samples obtained at the same time that gas flux measurements were made. Nitrous oxide concentrations in the soil profile were quantified by sampling soil air at depths of 5 and 15 cm using stationary air probes. On the manured plots 67% of the total N{sub 2}O emitted during the growing season occurred during the first 7 wk following manure application. Fluxes of N{sub 2}O occurred in episodes with maxima that ranged from 0.070 mg m{sup {minus}2} h{sup {minus}1} on the soil without manure amendment to 0.171 and 0.494 mg M{sup {minus}2} h{sup {minus}1} on soils that had received the low and high rates of manure, respectively. These high fluxes coincided with periods when NO{sub 3}{sup {minus}}-N levels and soil water contents were relatively high. Fluxes were highest the first day after manure application and returned to near pre-application levels 7 d later. This episode was followed by short-lived peaks of N{sub 2}O flux that usually followed periods of rain. 34 refs., 4 figs., 2 tabs.

  3. Antibiotic uptake by plants from soil fertilized with animal manure.

    PubMed

    Kumar, K; Gupta, S C; Baidoo, S K; Chander, Y; Rosen, C J

    2005-01-01

    Antibiotics are commonly added to animal feed as supplements to promote growth of food animals. However, absorption of antibiotics in the animal gut is not complete and as a result substantial amounts of antibiotics are excreted in urine and feces that end up in manure. Manure is used worldwide not only as a source of plant nutrients but also as a source of organic matter to improve soil quality especially in organic and sustainable agriculture. Greenhouse studies were conducted to determine whether or not plants grown in manure-applied soil absorb antibiotics present in manure. The test crops were corn (Zea mays L.), green onion (Allium cepa L.), and cabbage (Brassica oleracea L. Capitata group). All three crops absorbed chlortetracycline but not tylosin. The concentrations of chlortetracycline in plant tissues were small (2-17 ng g(-1) fresh weight), but these concentrations increased with increasing amount of antibiotics present in the manure. This study points out the potential human health risks associated with consumption of fresh vegetables grown in soil amended with antibiotic laden manures. The risks may be higher for people who are allergic to antibiotics and there is also the possibility of enhanced antimicrobial resistance as a result of human consumption of these vegetables.

  4. Impact of dairy manure pre-application treatment on manure composition, soil dynamics of antibiotic resistance genes, and abundance of antibiotic-resistance genes on vegetables at harvest.

    PubMed

    Tien, Yuan-Ching; Li, Bing; Zhang, Tong; Scott, Andrew; Murray, Roger; Sabourin, Lyne; Marti, Romain; Topp, Edward

    2017-03-01

    Manuring ground used for crop production is an important agricultural practice. Should antibiotic-resistant enteric bacteria carried in the manure be transferred to crops that are consumed raw, their consumption by humans or animals will represent a route of exposure to antibiotic resistance genes. Treatment of manures prior to land application is a potential management option to reduce the abundance of antibiotic resistance genes entrained with manure application. In this study, dairy manure that was untreated, anaerobically digested, mechanically dewatered or composted was applied to field plots that were then cropped to lettuce, carrots and radishes. The impact of treatment on manure composition, persistence of antibiotic resistance gene targets in soil following application, and distribution of antibiotic resistance genes and bacteria on vegetables at harvest was determined. Composted manure had the lowest abundance of antibiotic resistance gene targets compared to the other manures. There was no significant difference in the persistence characteristics of antibiotic resistance genes following land application of the various manures. Compared to unmanured soil, antibiotic resistance genes were detected more frequently in soil receiving raw or digested manure, whereas they were not in soil receiving composted manure. The present study suggests that vegetables grown in ground receiving raw or digested manure are at risk of contamination with manure-borne antibiotic resistant bacteria, whereas vegetables grown in ground receiving composted manure are less so.

  5. Determination of antibiotic residues in manure, soil, and surface waters

    USGS Publications Warehouse

    Christian, T.; Schneider, R.J.; Farber, H.A.; Skutlarek, D.; Meyer, M.T.; Goldbach, H.E.

    2003-01-01

    In the last years more and more often detections of antimicrobially active compounds ("antibiotics") in surface waters have been reported. As a possible input pathway in most cases municipal sewage has been discussed. But as an input from the realm of agriculture is conceivable as well, in this study it should be investigated if an input can occur via the pathway application of liquid manure on fields with the subsequent mechanisms surface run-off/interflow, leaching, and drift. For this purpose a series of surface waters, soils, and liquid manures from North Rhine-Westphalia (Northwestern Germany) were sampled and analyzed for up to 29 compounds by HPLC-MS/MS. In each of the surface waters antibiotics could be detected. The highest concentrations were found in samples from spring (300 ng/L of erythromycin). Some of the substances detected (e.g., tylosin), as well as characteristics in the landscape suggest an input from agriculture in some particular cases. In the investigation of different liquid manure samples by a fast immunoassay method sulfadimidine could be detected in the range of 1...2 mg/kg. Soil that had been fertilized with this liquid manure showed a content of sulfadimidine extractable by accelerated solvent extraction (ASE) of 15 ??g/kg dry weight even 7 months after the application. This indicates the high stability of some antibiotics in manure and soil.

  6. Detection of Manure-Derived Organic Compounds in Rivers Draining Agricultural Areas of Intensive Manure Spreading

    NASA Astrophysics Data System (ADS)

    Jardé, E.; Gruau, G.

    2006-12-01

    This study presents the potentiality of organic markers to trace the impact of animal manure in soils and rivers draining agricultural watersheds. As described by Gruau et al. (in this session), the analysis of long term records of dissolved organic matter (DOM) in five watersheds in Brittany (western of France) shows divergent trends which can not be explained solely by global changes. One alternative explanation could be that long- term records of DOM in rivers are controlled by human activities, and notably by agricultural practices. In Brittany, the agricultural intensification led to an over-application of animal manures to soils. This practice can strongly increase the amount of soil-water extractable organic matter, thereby leading to an increase of organic matter fluxes in agricultural landscapes and then to a contamination of river waters. Such an hypothesis deserves consideration in view of the massive manure fluxes that are disposed on agricultural land in many parts of the world. In this goal, our study aimed at determining potential sources of organic matter and molecular markers or specific distributions in rivers draining agricultural watersheds. In this study we focused on the analysis of pig slurries because of the importance of pig production in Brittany. The analysis of pig slurry evidenced the presence of coprostanol (5β) as a specific marker, originating from the bio- hydrogenation of cholesterol by anaerobic bacteria. The difference with other animal or human wastes has been evidenced by two ratios: 5β/C27 and C29/C27. After the validation of the ability of coprostanol to be a molecular marker of pig slurry, our analysis has been focused on the OM of watersheds in Brittany showing divergent evolutions. The results show a systematic relation between the C29/C27 and 5β/C27 ratios and the type of animal breeding in each watershed. This study allows us to evidence the impact of animal breeding activities in the analysed rivers. Such a study

  7. Long-term manure amendments reduced soil aggregate stability via redistribution of the glomalin-related soil protein in macroaggregates

    PubMed Central

    Xie, Hongtu; Li, Jianwei; Zhang, Bin; Wang, Lianfeng; Wang, Jingkuan; He, Hongbo; Zhang, Xudong

    2015-01-01

    Glomalin-related soil protein (GRSP) contributes to the formation and maintenance of soil aggregates, it is however remains unclear whether long-term intensive manure amendments alter soil aggregates stability and whether GRSP regulates these changes. Based on a three-decade long fertilization experiment in northeast China, this study examined the impact of long-term manure input on soil organic carbon (SOC), total and easily extractable GRSP (GRSPt and GRSPe) and their respective allocations in four soil aggregates (>2000 μm; 2000–250 μm; 250–53 μm; and <53 μm). The treatments include no fertilization (CK), low and high manure amendment (M1, M2), chemical nitrogen, phosphorus and potassium fertilizers (NPK), and combined manure and chemical fertilizers (NPKM1, NPKM2). Though SOC, GRSPe and GRSPt in soil and SOC in each aggregate generally increased with increasing manure input, GRSPt and GRSPe in each aggregate showed varying changes with manure input. Both GRSP in macroaggregates (2000–250 μm) were significantly higher under low manure input, a pattern consistent with changes in soil aggregate stability. Constituting 38~49% of soil mass, macroaggregates likely contributed to the nonlinear changes of aggregate stability under manure amendments. The regulatory process of GRSP allocations in soil aggregates has important implications for manure management under intensive agriculture. PMID:26423355

  8. Long-term manure amendments reduced soil aggregate stability via redistribution of the glomalin-related soil protein in macroaggregates.

    PubMed

    Xie, Hongtu; Li, Jianwei; Zhang, Bin; Wang, Lianfeng; Wang, Jingkuan; He, Hongbo; Zhang, Xudong

    2015-10-01

    Glomalin-related soil protein (GRSP) contributes to the formation and maintenance of soil aggregates, it is however remains unclear whether long-term intensive manure amendments alter soil aggregates stability and whether GRSP regulates these changes. Based on a three-decade long fertilization experiment in northeast China, this study examined the impact of long-term manure input on soil organic carbon (SOC), total and easily extractable GRSP (GRSPt and GRSPe) and their respective allocations in four soil aggregates (>2000 μm; 2000-250 μm; 250-53 μm; and <53 μm). The treatments include no fertilization (CK), low and high manure amendment (M1, M2), chemical nitrogen, phosphorus and potassium fertilizers (NPK), and combined manure and chemical fertilizers (NPKM1, NPKM2). Though SOC, GRSPe and GRSPt in soil and SOC in each aggregate generally increased with increasing manure input, GRSPt and GRSPe in each aggregate showed varying changes with manure input. Both GRSP in macroaggregates (2000-250 μm) were significantly higher under low manure input, a pattern consistent with changes in soil aggregate stability. Constituting 38~49% of soil mass, macroaggregates likely contributed to the nonlinear changes of aggregate stability under manure amendments. The regulatory process of GRSP allocations in soil aggregates has important implications for manure management under intensive agriculture.

  9. Long-term manure amendments reduced soil aggregate stability via redistribution of the glomalin-related soil protein in macroaggregates

    NASA Astrophysics Data System (ADS)

    Xie, Hongtu; Li, Jianwei; Zhang, Bin; Wang, Lianfeng; Wang, Jingkuan; He, Hongbo; Zhang, Xudong

    2015-10-01

    Glomalin-related soil protein (GRSP) contributes to the formation and maintenance of soil aggregates, it is however remains unclear whether long-term intensive manure amendments alter soil aggregates stability and whether GRSP regulates these changes. Based on a three-decade long fertilization experiment in northeast China, this study examined the impact of long-term manure input on soil organic carbon (SOC), total and easily extractable GRSP (GRSPt and GRSPe) and their respective allocations in four soil aggregates (>2000 μm 2000-250 μm 250-53 μm and <53 μm). The treatments include no fertilization (CK), low and high manure amendment (M1, M2), chemical nitrogen, phosphorus and potassium fertilizers (NPK), and combined manure and chemical fertilizers (NPKM1, NPKM2). Though SOC, GRSPe and GRSPt in soil and SOC in each aggregate generally increased with increasing manure input, GRSPt and GRSPe in each aggregate showed varying changes with manure input. Both GRSP in macroaggregates (2000-250 μm) were significantly higher under low manure input, a pattern consistent with changes in soil aggregate stability. Constituting 38~49% of soil mass, macroaggregates likely contributed to the nonlinear changes of aggregate stability under manure amendments. The regulatory process of GRSP allocations in soil aggregates has important implications for manure management under intensive agriculture.

  10. [Effects of Green Manure Intercropping and Straw Mulching on Winter Rape Rhizosphere Soil Organic Carbon and Soil Respiration].

    PubMed

    Zhou, Quan; Wang, Long-chang; Xiong, Ying; Zhang, Sai; Du, Juan; Zhao, Lin-lu

    2016-03-15

    Under the background of global warming, the farmland soil respiration has become the main way of agricultural carbon emissions. And green manure has great potential to curb greenhouse gas emissions and achieve energy conservation and emissions reduction. However, in purple soil region of Southwest, China, soil respiration under green manure remains unclear, especially in the winter and intercropping. Through the green manure ( Chinese milk vetch) intercropping with rape, therefore, we compared the effects of rape rhizosphere under straw mulching. The soil organic carbon and soil respiration were examined. The results showed, compared with straw mulching, root separation was the major influencing factors of soil organic carbon on rape rhizosphere. Soil organic carbon was significantly decreased by root interaction. In addition, straw mulching promoted while green manure intercropping inhibited the soil respiration. Soil respiration presented the general characteristics of fall-rise-fall due to the strong influence of rape growth period. Therefore, it showed a cubic curve relationship with soil temperature.

  11. Bloom of resident antibiotic-resistant bacteria in soil following manure fertilization.

    PubMed

    Udikovic-Kolic, Nikolina; Wichmann, Fabienne; Broderick, Nichole A; Handelsman, Jo

    2014-10-21

    The increasing prevalence of antibiotic-resistant bacteria is a global threat to public health. Agricultural use of antibiotics is believed to contribute to the spread of antibiotic resistance, but the mechanisms by which many agricultural practices influence resistance remain obscure. Although manure from dairy farms is a common soil amendment in crop production, its impact on the soil microbiome and resistome is not known. To gain insight into this impact, we cultured bacteria from soil before and at 10 time points after application of manure from cows that had not received antibiotic treatment. Soil treated with manure contained a higher abundance of β-lactam-resistant bacteria than soil treated with inorganic fertilizer. Functional metagenomics identified β-lactam-resistance genes in treated and untreated soil, and indicated that the higher frequency of resistant bacteria in manure-amended soil was attributable to enrichment of resident soil bacteria that harbor β-lactamases. Quantitative PCR indicated that manure treatment enriched the blaCEP-04 gene, which is highly similar (96%) to a gene found previously in a Pseudomonas sp. Analysis of 16S rRNA genes indicated that the abundance of Pseudomonas spp. increased in manure-amended soil. Populations of other soil bacteria that commonly harbor β-lactamases, including Janthinobacterium sp. and Psychrobacter pulmonis, also increased in response to manure treatment. These results indicate that manure amendment induced a bloom of certain antibiotic-resistant bacteria in soil that was independent of antibiotic exposure of the cows from which the manure was derived. Our data illustrate the unintended consequences that can result from agricultural practices, and demonstrate the need for empirical analysis of the agroecosystem.

  12. Bloom of resident antibiotic-resistant bacteria in soil following manure fertilization

    PubMed Central

    Udikovic-Kolic, Nikolina; Wichmann, Fabienne; Broderick, Nichole A.; Handelsman, Jo

    2014-01-01

    The increasing prevalence of antibiotic-resistant bacteria is a global threat to public health. Agricultural use of antibiotics is believed to contribute to the spread of antibiotic resistance, but the mechanisms by which many agricultural practices influence resistance remain obscure. Although manure from dairy farms is a common soil amendment in crop production, its impact on the soil microbiome and resistome is not known. To gain insight into this impact, we cultured bacteria from soil before and at 10 time points after application of manure from cows that had not received antibiotic treatment. Soil treated with manure contained a higher abundance of β-lactam–resistant bacteria than soil treated with inorganic fertilizer. Functional metagenomics identified β-lactam–resistance genes in treated and untreated soil, and indicated that the higher frequency of resistant bacteria in manure-amended soil was attributable to enrichment of resident soil bacteria that harbor β-lactamases. Quantitative PCR indicated that manure treatment enriched the blaCEP-04 gene, which is highly similar (96%) to a gene found previously in a Pseudomonas sp. Analysis of 16S rRNA genes indicated that the abundance of Pseudomonas spp. increased in manure-amended soil. Populations of other soil bacteria that commonly harbor β-lactamases, including Janthinobacterium sp. and Psychrobacter pulmonis, also increased in response to manure treatment. These results indicate that manure amendment induced a bloom of certain antibiotic-resistant bacteria in soil that was independent of antibiotic exposure of the cows from which the manure was derived. Our data illustrate the unintended consequences that can result from agricultural practices, and demonstrate the need for empirical analysis of the agroecosystem. PMID:25288759

  13. Fate and transport of tylosin-resistant bacteria and macrolide resistance genes in artificially drained agricultural fields receiving swine manure.

    PubMed

    Luby, Elizabeth M; Moorman, Thomas B; Soupir, Michelle L

    2016-04-15

    Application of manure from swine treated with antibiotics introduces antibiotics and antibiotic resistance genes to soil with the potential for further movement in drainage water, which may contribute to the increase in antibiotic resistance in non-agricultural settings. We compared losses of antibiotic-resistant Enterococcus and macrolide-resistance (erm and msrA) genes in water draining from plots with or without swine manure application under chisel plow and no till conditions. Concentrations of ermB, ermC and ermF were all >10(9)copies g(-1) in manure from tylosin-treated swine, and application of this manure resulted in short-term increases in the abundance of these genes in soil. Abundances of ermB, ermC and ermF in manured soil returned to levels identified in non-manured control plots by the spring following manure application. Tillage practices yielded no significant differences (p>0.10) in enterococci or erm gene concentrations in drainage water and were therefore combined for further analysis. While enterococci and tylosin-resistant enterococci concentrations in drainage water showed no effects of manure application, ermB and ermF concentrations in drainage water from manured plots were significantly higher (p<0.01) than concentrations coming from non-manured plots. ErmB and ermF were detected in 78% and 44%, respectively, of water samples draining from plots receiving manure. Although ermC had the highest concentrations of the three genes in drainage water, there was no effect of manure application on ermC abundance. MsrA was not detected in manure, soil or water. This study is the first to report significant increases in abundance of resistance genes in waters draining from agricultural land due to manure application. Copyright © 2016. Published by Elsevier B.V.

  14. Phosphorus leaching in manure-amended Atlantic Coastal Plain soils.

    PubMed

    Butler, Jennifer S; Coale, Frank J

    2005-01-01

    Targeting the sources of phosphorus (P) and transport pathways of drainage from agricultural land will assist in the reduction of P loading to surface waters. Our research investigated the vertical movement of P from dairy manure and broiler litter through four Atlantic Coastal Plain soils. A randomized split-plot design with two main-plot tillage treatments (no tillage [NT] and chisel tillage [CH]) and five manure P rate split-plot treatments was used at each location. The split-plot P rates were 0, 100, 200, 300, and 400 kg P ha(-1) yr(-1). Four consecutive years of manure application began at all sites 5 yr before sampling. Soils were sampled to a depth of 150 cm from each split plot in seven depth increments and analyzed for soil test phosphorus (STP), water-extractable soil phosphorus (WSP), and degree of phosphorus saturation (DPS). The DPS of the 0- to 15-cm depths confirmed that at the 100 kg P ha(-1) yr(-1) application rate, all sites exceeded the threshold for P saturation (30%). At depths greater than 30 cm, DPS was typically below the 30% saturation threshold. The DPS change points ranged from 25 to 34% for the 0- to 90-cm depths. Our research concluded that the risk of P leaching through the matrix of the Atlantic Coastal Plain soils studied was not high; however, P leaching via macropore bypass may contribute to P loss from these soils.

  15. Agriculture: Soils

    EPA Pesticide Factsheets

    Productive soils, a favorable climate, and clean and abundant water resources are essential for growing crops, raising livestock, and for ecosystems to continue to provide the critical provisioning services that humans need.

  16. Dynamic chemical characteristics of soil solution after pig manure application: a column study.

    PubMed

    Hao, Xiuzhen; Zhou, Dongmei; Sun, Lei; Li, Lianzhen; Zhang, Hailin

    2008-06-01

    When manures from intensive livestock operations are applied to agricultural or vegetable fields at a high rate, large amounts of salts and metals will be introduced into soils. Using a column leaching experiment, this study assessed the leaching potential of the downward movement of Cu and Zn as well as some salt ions after an intensive farm pig manure at rates of 0%, 5% and 10% (w/w) were applied to the top 20 cm of two different textured soils (G soil -sandy loam soil; H soil-silty clay loam soil), and investigated the growth of amaranth and Cu and Zn transfer from soil to amaranth (Amaranthus tricolor). Soil solutions were obtained at 20, 40 and 60 cm depth of the packed column and analyzed for pH, electrical conductivity (EC), dissolved organic matter (DOC) and Cu and Zn concentrations. The results indicated that application of pig manure containing Cu and Zn to sandy loam soil might cause higher leaching and uptake risk than silty clay loam soil, especially at high application rates. And manure amendment at 5% and 10% significantly decreased the biomass of amaranth, in which the salt impact rather than Cu and Zn toxicity from manures played more important role in amaranth growth. Thus the farmer should avoid application the high rate of pig manure containing metal and salt to soil at a time, especially in sandy soil.

  17. Temporal succession of soil antibiotic resistance genes following application of swine, cattle and poultry manures spiked with or without antibiotics.

    PubMed

    Zhang, Yu-Jing; Hu, Hang-Wei; Gou, Min; Wang, Jun-Tao; Chen, Deli; He, Ji-Zheng

    2017-09-27

    Land application of animal manure is a common agricultural practice potentially leading to dispersal and propagation of antibiotic resistance genes (ARGs) in environmental settings. However, the fate of resistome in agro-ecosystems over time following application of different manure sources has never been compared systematically. Here, soil microcosm incubation was conducted to compare effects of poultry, cattle and swine manures spiked with or without the antibiotic tylosin on the temporal changes of soil ARGs. The high-throughput quantitative PCR detected a total of 185 unique ARGs, with Macrolide-Lincosamide-Streptogramin B resistance as the most frequently encountered ARG type. The diversity and abundance of ARGs significantly increased following application of manure and manure spiked with tylosin, with more pronounced effects observed in the swine and poultry manure treatments than in the cattle manure treatment. The level of antibiotic resistance gradually decreased over time in all manured soils but was still significantly higher in the soils treated with swine and poultry manures than in the untreated soils after 130 days' incubation. Tylosin-amended soils consistently showed higher abundances of ARGs than soils treated with manure only, suggesting a strong selection pressure of antibiotic-spiked manure on soil ARGs. The relative abundance of ARGs had significantly positive correlations with integrase and transposase genes, indicative of horizontal transfer potential of ARGs in manure and tylosin treated soils. Our findings provide evidence that application of swine and poultry manures might enrich more soil ARGs than cattle manure, which necessitates the appropriate treatment of raw animal manures prior to land application to minimise the spread of environmental ARGs. Copyright © 2017 Elsevier Ltd. All rights reserved.

  18. Bacterial mobilization and transport through manure enriched soils: Experiment and modeling.

    PubMed

    Sepehrnia, N; Memarianfard, L; Moosavi, A A; Bachmann, J; Guggenberger, G; Rezanezhad, F

    2017-10-01

    A precise evaluation of bacteria transport and mathematical investigations are useful for best management practices in agroecosystems. In this study, using laboratory experiments and modeling approaches, we assess the transport of bacteria released from three types of manure (cow, sheep, and poultry) to find the importance of the common manures in agricultural activities in soil and water pollution. Thirty six intact soil columns with different textures (sandy, loamy, and silty clay loam) were sampled. Fecal coliform leaching from layers of the manures on the soil surface was conducted under steady-state saturated flow conditions at 20 °C for up to four Pore Volumes (PVs). Separate leaching experiments were conducted to obtain the initial concentrations of bacteria released from the manures (Co). Influent (Co) and effluent (C) bacteria concentrations were measured by the plate-count method and the normalized concentrations (C/C0) were plotted versus PV representing the breakthrough curves (BTCs). Transport parameters were predicted using the attachment/detachment model (two-kinetic site) in HYDRUS-1D. Simulations fitted well the experimental data (R(2) = 0.50-0.96). The attachment, detachment, and straining coefficients of bacteria were more influenced by the soils treated with cow manure compared to the sheep and poultry manures. Influent curves of fecal coliforms from the manures (leached without soil) illustrated that the poultry manure had the highest potential to pollute the effluent water from the soils in term of concentration, but the BTCs and simulated data related to the treated soils illustrated that the physical shape of cow manure was more important to both straining and detachment of bacteria back into the soil solution. Detachment trends of bacteria were observed through loam and silty clay loam soils treated with cow manure compared to the cow manure enriched sandy soil. We conclude that management strategies must specifically minimize the

  19. Microbial pollution in wildlife: Linking agricultural manuring and bacterial antibiotic resistance in red-billed choughs.

    PubMed

    Blanco, Guillermo; Lemus, Jesús A; Grande, Javier

    2009-05-01

    The spread of pathogens in the environment due to human activities (pathogen pollution) may be involved in the emergence of many diseases in humans, livestock and wildlife. When manure from medicated livestock and urban effluents is spread onto agricultural land, both residues of antibiotics and bacteria carrying antibiotic resistance may be introduced into the environment. The transmission of bacterial resistance from livestock and humans to wildlife remains poorly understood even while wild animals may act as reservoirs of resistance that may be amplified and spread in the environment. We determined bacterial resistance to antibiotics in wildlife using the red-billed chough Pyrrhocorax pyrrhocorax as a potential bioindicator of soil health, and evaluated the role of agricultural manuring with waste of different origins in the acquisition and characteristics of such resistance. Agricultural manure was found to harbor high levels of bacterial resistance to multiple antibiotics. Choughs from areas where manure landspreading is a common agricultural practice harbor a high bacterial resistance to multiple antibiotics, resembling the resistance profile found in the waste (pig slurry and sewage sludge) used in each area. The transfer of bacterial resistance to wildlife should be considered as an important risk for environmental health when agricultural manuring involves fecal material containing multiresistant enteric bacteria including pathogens from livestock operations and urban areas. The assessment of bacterial resistance in wild animals may be valuable for the monitoring of environmental health and for the management of emergent infectious diseases influenced by the impact of different human activities in the environment.

  20. Antibiotic resistance gene abundances associated with antibiotics and heavy metals in animal manures and agricultural soils adjacent to feedlots in Shanghai; China.

    PubMed

    Ji, Xiuling; Shen, Qunhui; Liu, Fang; Ma, Jing; Xu, Gang; Wang, Yuanlong; Wu, Minghong

    2012-10-15

    Eight antibiotic resistance genes (ARGs), 7 heavy metals, and 6 antibiotics were quantified in manures and soils collected from multiple feedlots in Shanghai. The samples were analyzed to determine if ARG abundances were associated with heavy metal concentration and independent of antibiotics. The results revealed the presence of chloramphenicol, sulfonamides and tetracyclines at concentration ranges of 3.27-17.85, 5.85-33.37 and 4.54-24.66 mg kg(-1), respectively. Typical heavy metals, such as Cu, Zn, and As, were detected at concentration ranges of 32.3-730.1, 75.9-4333.8, and 2.6-617.2 mg kg(-1). All ARGs tested were detected in the collected samples except tetB(P), which was absent in animal manures. Overall, sulfonamide ARGs were more abundant than tetracycline ARGs. Except for sulII, only a weak positive correlation was found between ARGs and their corresponding antibiotics. On the contrary, significant positive correlations (p<0.05) were found between some ARGs and typical heavy metals. For example, sulA and sulIII were strongly correlated with levels of Cu, Zn and Hg. The data demonstrated that the presence of ARGs was relatively independent of their respective antibiotic inducer. In addition to antibiotics, toxic heavy metals, such as Hg, Cu, and Zn, exerted a strong selection pressure and acted as complementary factors for ARG abundance. Copyright © 2012 Elsevier B.V. All rights reserved.

  1. [Effects of applying pig manure on lettuce yield and nitrate content and soil nutrients].

    PubMed

    Hu, Liu-Jie; Liu, Jian-Fei; Liao, Dun-Xiu; Nie, Min; Xie, Yong-Hong; Zhang, Hong-Xia; Zhou, Zheng-Ke; Xiao, He-Ai

    2013-07-01

    A pot experiment with two representative soils (purple soil and yellow soil) in Southwest China was conducted to study the effects of applying pig manure on the lettuce (Lactuca sativa L. var. capitata L. ) yield and nitrate content and the soil nutrients. Applying pig manure increased the lettuce yield significantly, and the increment was higher for yellow soil than for purple soil. The nitrate and total nitrogen, phosphorus, and potassium contents in lettuce plants were closely related to soil type and pig manure application rate. According to the evaluation standards of the nitrate pollution level of vegetables formulated by the Chinese Academy of Agricultural Sciences, the nitrate content in lettuce plants growing on purple soil was lower than the grade I (< or = 432 mg x kg(-1), slight pollution) in treatments CK (no pig manure application) and M1 ( applying 200 kg N x hm(-2) of pig manure), but generally higher than the grade II (< or = 758 mg x kg(-1), moderate pollution) while not exceeded the grade III (< or = 1440 mg x kg(-1), heavy pollution) in other treatments. The nitrate content in lettuce plants growing on yellow soil was lower than the grade I, except that in the treatments of chemical fertilizations and of M8 (applying 1600 kg N x hm(-2) of pig manure) where the plant nitrate content was exceeded the grade II. The critical value of Olsen-P characterizing the apparent leaching risk level of phosphorous in yellow soil and purple soil was 96.3 and 107.7 mg x kg(-1), respectively. The environmental safety capacity of pig manure was higher for yellow soil than for purple soil. Applying pig manure increased the organic carbon and total nitrogen contents of the two soils significantly.

  2. Degradation and dissipation of the veterinary ionophore lasalocid in manure and soil.

    PubMed

    Žižek, Suzana; Dobeic, Martin; Pintarič, Štefan; Zidar, Primož; Kobal, Silvestra; Vidrih, Matej

    2015-11-01

    Lasalocid is a veterinary ionophore antibiotic used for prevention and treatment of coccidiosis in poultry. It is excreted from the treated animals mostly in its active form and enters the environment with the use of contaminated manure on agricultural land. To properly assess the risk that lasalocid poses to the environment, it is necessary to know its environmental concentrations as well as the rates of its degradation in manure and dissipation in soil. These values are still largely unknown. A research was undertaken to ascertain the rate of lasalocid degradation in manure under different storage conditions (aging in a pile or composting) and on agricultural soil after using lasalocid-contaminated manure. The results have shown that there is considerable difference in lasalocid degradation between aging manure with no treatment (t1/2=61.8±1.7 d) and composting (t1/2=17.5±0.8 d). Half-lives in soil are much shorter (on average 3.1±0.4 d). On the basis of the measured concentrations of lasalocid in soil after manure application, we can conclude that it can potentially be harmful to soil organisms (PEC/PNEC ratio of 1.18), but only in a worst-case scenario of using the maximum permissible amount of manure and immediately after application. To make certain that no harmful effects occur, composting is recommended.

  3. Immobilization of tetracyclines in manure and manure-amended soils using aluminum-based drinking water treatment residuals.

    PubMed

    Punamiya, Pravin; Sarkar, Dibyendu; Rakshit, Sudipta; Elzinga, Evert J; Datta, Rupali

    2016-02-01

    Veterinary antibiotics (VAs) are emerging contaminants of concern in the environment, mainly due to the potential for development of antibiotic-resistant bacteria and effect on microbiota that could interfere with crucial ecosystem functions such as nutrient cycling and decomposition. High levels of VAs such as tetracyclines (TCs) have been reported in agricultural soils amended with manure, which also has the potential to cause surface and groundwater contamination. Several recent studies have focused on developing methods to immobilize VAs such as composting with straw, hardwood chips, commercial biochar, aeration, mixing, heat treatment, etc. The major shortcomings of these methods include high cost and limited effectiveness. In the current study, we assessed the effectiveness of aluminum-based drinking water treatment residuals (Al-WTR) as a "green" sorbent to immobilize TCs in manure and manure-applied soils with varying physicochemical properties by laboratory incubation study. Results show that Al-WTR is very effective in immobilizing tetracycline (TTC) and oxytetracycline (OTC). The presence of phosphate resulted in significant (p < 0.01) decrease in TTC/OTC sorption by Al-WTR, but the presence of sulfate did not. attenuated total reflection (ATR)-FTIR spectroscopy indicate that TTC and OTC likely forming surface complexes via inner-sphere-type bonds in soils, manure, and manure-applied soils amended with Al-WTR.

  4. Effect of Poultry Manure Amendment on Soil Phosphatase Activity

    USDA-ARS?s Scientific Manuscript database

    Animal manure has traditionally been used as a fertilizer source. Manure phosphorus (P) exists in many forms, not all of which are immediately available. Microbial and plant-derived phosphatases can mineralize some organic P forms. Increased understanding of effects of manure application on soil p...

  5. Influence of Chicken Manure Fertilization on Antibiotic-Resistant Bacteria in Soil and the Endophytic Bacteria of Pakchoi

    PubMed Central

    Yang, Qingxiang; Zhang, Hao; Guo, Yuhui; Tian, Tiantian

    2016-01-01

    Animal manure is commonly used as fertilizer for agricultural crops worldwide, even though it is believed to contribute to the spread of antibiotic resistance from animal intestines to the soil environment. However, it is unclear whether and how there is any impact of manure fertilization on populations and community structure of antibiotic-resistant endophytic bacteria (AREB) in plant tissues. To investigate the effect of manure and organic fertilizer on endophytic bacterial communities, pot experiments were performed with pakchoi grown with the following treatments: (1) non-treated; (2) chicken manure-treated and (3) organic fertilizer-treated. Manure or organic fertilizer significantly increased the abundances of total cultivable endophytic bacteria (TCEB) and AREB in pakchoi, and the effect of chicken manure was greater than that of organic fertilizer. Further, 16S rDNA sequencing and the phylogenetic analysis indicated that chicken manure or organic fertilizer application increased the populations of multiple antibiotic-resistant bacteria (MARB) in soil and multiple antibiotic-resistant endophytic bacteria (MAREB) in pakchoi. The identical multiple antibiotic-resistant bacterial populations detected in chicken manure, manure- or organic fertilizer-amended soil and the vegetable endophytic system were Brevundimonas diminuta, Brachybacterium sp. and Bordetella sp., suggesting that MARB from manure could enter and colonize the vegetable tissues through manure fertilization. The fact that some human pathogens with multiple antibiotic resistance were detected in harvested vegetables after growing in manure-amended soil demonstrated a potential threat to human health. PMID:27376311

  6. Influence of Chicken Manure Fertilization on Antibiotic-Resistant Bacteria in Soil and the Endophytic Bacteria of Pakchoi.

    PubMed

    Yang, Qingxiang; Zhang, Hao; Guo, Yuhui; Tian, Tiantian

    2016-06-30

    Animal manure is commonly used as fertilizer for agricultural crops worldwide, even though it is believed to contribute to the spread of antibiotic resistance from animal intestines to the soil environment. However, it is unclear whether and how there is any impact of manure fertilization on populations and community structure of antibiotic-resistant endophytic bacteria (AREB) in plant tissues. To investigate the effect of manure and organic fertilizer on endophytic bacterial communities, pot experiments were performed with pakchoi grown with the following treatments: (1) non-treated; (2) chicken manure-treated and (3) organic fertilizer-treated. Manure or organic fertilizer significantly increased the abundances of total cultivable endophytic bacteria (TCEB) and AREB in pakchoi, and the effect of chicken manure was greater than that of organic fertilizer. Further, 16S rDNA sequencing and the phylogenetic analysis indicated that chicken manure or organic fertilizer application increased the populations of multiple antibiotic-resistant bacteria (MARB) in soil and multiple antibiotic-resistant endophytic bacteria (MAREB) in pakchoi. The identical multiple antibiotic-resistant bacterial populations detected in chicken manure, manure- or organic fertilizer-amended soil and the vegetable endophytic system were Brevundimonas diminuta, Brachybacterium sp. and Bordetella sp., suggesting that MARB from manure could enter and colonize the vegetable tissues through manure fertilization. The fact that some human pathogens with multiple antibiotic resistance were detected in harvested vegetables after growing in manure-amended soil demonstrated a potential threat to human health.

  7. Maize growth responses to soil microbes and soil properties after fertilization with different green manures.

    PubMed

    Tao, Jiemeng; Liu, Xueduan; Liang, Yili; Niu, Jiaojiao; Xiao, Yunhua; Gu, Yabing; Ma, Liyuan; Meng, Delong; Zhang, Yuguang; Huang, Wenkun; Peng, Deliang; Yin, Huaqun

    2017-02-01

    The use of green manures in agriculture can provide nutrients, affect soil microbial communities, and be a more sustainable management practice. The activities of soil microbes can effect crop growth, but the extent of this effect on yield remains unclear. We investigated soil bacterial communities and soil properties under four different green manure fertilization regimes (Vicia villosa, common vetch, milk vetch, and radish) and determined the effects of these regimes on maize growth. Milk vetch showed the greatest potential for improving crop productivity and increased maize yield by 31.3 %. This change might be related to changes in soil microbes and soil properties. The entire soil bacterial community and physicochemical properties differed significantly among treatments, and there were significant correlations between soil bacteria, soil properties, and maize yield. In particular, abundance of the phyla Acidobacteria and Verrucomicrobia was positively correlated with maize yield, while Proteobacteria and Chloroflexi were negatively correlated with yield. These data suggest that the variation of maize yield was related to differences in soil bacteria. The results also indicate that soil pH, alkali solution nitrogen, and available potassium were the key environmental factors shaping soil bacterial communities and determining maize yields. Both soil properties and soil microbes might be useful as indicators of soil quality and potential crop yield.

  8. Effects of manure-application practices on curli production by Escherichia coli transported through soil

    NASA Astrophysics Data System (ADS)

    Truhlar, A. M.; Salvucci, A. E.; Siler, J. D.; Richards, B. K.; Geohring, L.; Walter, M. T.; Hay, A. G.

    2014-12-01

    The release of Escherichia coli into the environment from untreated manure can pose a threat to human health. Environmental survival of E. coli has been linked to extracellular fibers called curli. We investigated the effect of manure management (surface application followed by incorporation versus immediate incorporation) on the relative abundance of curli-producing E. coli in subsurface drainage effluent. Samples were collected from three dairy farms. The proportion of curli-producing E. coli in the manure storage facilities was uniform across the farms. However, the abundance of curli-producing E. coli was much greater (P < 0.05) in the tile drains of farms performing surface application of manure than in the tile drain of the farm that incorporated manure. This field result was corroborated by controlled soil column experiments; the abundance of curli-producing E. coli in soil column effluents was greater (P < 0.05) when manure was surface-applied than when it was incorporated. Our findings suggest selection pressures resulting from the different manure application methods affected curli production by E. coli isolates transported through soil. Given the importance of curli production in pathogenesis, this work highlights the effect that manure management strategies may have on pathogenesis-associated phenotypes of bacteria in agricultural subsurface runoff.

  9. Application of manure to no-till soils: Phosphorus losses by sub-surface and surface pathways

    USDA-ARS?s Scientific Manuscript database

    Concern over the acceleration of eutrophication by agricultural runoff has focused attention on manure management in no-till. We evaluated losses of phosphorus (P) in sub-surface and surface flow as a function of dairy manure application to no-till soils on a dairy farm in north-central Pennsylvania...

  10. Macroporosity and manure influence on atrazine transport through soil.

    PubMed

    Rudra, R P; Abu-Zreig, M; Asare, S N

    2001-09-01

    The influence of soil macro-porosity and manure on atrazine (6-chloro-N-ethyl-N'-(1-methylethyl)-1,3,5-triazine-2,4-diamine) transport was investigated under laboratory conditions using disturbed and undisturbed soil columns. The macro-porosity in the soil column was obtained with CT scanning technique. Liquid manure was applied at the surface of soil column, 19 cm long and 8 cm in diameter, at a rate of 60 m3/ha. Experimental results revealed that atrazine moves faster through the soils in the presence of manure compared to soil without application of manure. The average time for elusion and the relative peak concentration in the disturbed soil column without manure was 14.5 h and 3.1%, respectively compared to 11.0 h and 6.9% in the presence of manure, respectively. Similar behavior was observed in the case of disturbed soil columns. Soil macro-porosity has shown large impact on atrazine transport, especially in the presence of manure.

  11. Long-term monitoring of sulfonamide leaching from manure amended soil into groundwater.

    PubMed

    Spielmeyer, Astrid; Höper, Heinrich; Hamscher, Gerd

    2017-06-01

    Veterinary antibiotics such as sulfonamides are frequently applied in livestock farming worldwide. Due to poor absorption in the animal gut and/or reversible metabolization sulfonamides are excreted in considerable amounts and can subsequently be detected in liquid manure. As manure is utilized for soil fertilization, sulfonamides can enter the environment via this pathway. Water samples taken below an agriculture field in Lower Saxony revealed the permanent entrance of sulfamethazine into groundwater and concentrations up to 100 ng L(-1) were determined. During a long-term lysimeter study, nine sulfonamides were applied to two different soil types by using fortified liquid manure. Divert mobilities were found with sulfamethazine und sulfamethoxazole showing the highest detection frequency in water samples taken below both bedrock and sandy soil. Four years after the last application of fortified manure, sulfonamides were still detectable in the leachate. Based on analyses of manure and fermentation residue samples, a permanent input of sulfonamides to the soil can be excluded. Thus, the positive findings must be caused by the antibiotics once applied. Soils fertilized with manure contaminated with sulfonamides can consequently be a long-time source for the transfer of antibiotics into groundwater. Copyright © 2017 Elsevier Ltd. All rights reserved.

  12. Abundance of 13C and 15N in emmer, spelt and naked barley grown on differently manured soils: towards a method for identifying past manuring practice.

    PubMed

    Kanstrup, Marie; Thomsen, Ingrid K; Andersen, Astrid J; Bogaard, Amy; Christensen, Bent T

    2011-10-15

    The shortage of plant-available nutrients probably constrained prehistoric cereal cropping but there is very little direct evidence relating to the history of ancient manuring. It has been shown that the long-term addition of animal manure elevates the δ(15)N value of soil and of modern crops grown on the soil. We have examined the δ(15)N and δ(13)C values of soil and of the grain and straw fractions of three ancient cereal types grown in unmanured, PK amended and cattle manured plots of the Askov long-term field experiment. Manure increased biomass yields and the δ(15)N values of soil and of grain and straw fractions of the ancient cereal types; differences in δ(15)N between unmanured and PK treatments were insignificant. The offset in straw and grain δ(15)N due to manure averaged 7.9 and 8.8 ‰, respectively, while the soil offset was 1.9 ‰. The soil and biomass δ(13)C values were not affected by nutrient amendments. Grain weights differed among cereal types but increased in the order: unmanured, PK, and animal manure. The grain and straw total-N concentration was generally not affected by manure addition. Our study suggests that long-term application of manure to permanently cultivated sites would have provided a substantial positive effect on cereals grown in early agriculture and will have left a significant N isotopic imprint on soil, grains and straw. We suggest that the use of animal manure can be identified by the (15)N abundance in remains of ancient cereals (e.g. charred grains) from archaeological sites and by growing test plants on freshly exposed palaeosols.

  13. Enzymatic hydrolysis of organic phosphorus in swine manure and soil.

    PubMed

    He, Zhongqi; Griffin, Timothy S; Honeycutt, C Wayne

    2004-01-01

    Organic phosphorus (Po) exists in many chemical forms that differ in their susceptibility to hydrolysis and, therefore, bioavailability to plants and microorganisms. Identification and quantification of these forms may significantly contribute to effective agricultural P management. Phosphatases catalyze reactions that release orthophosphate (Pi) from Po compounds. Alkaline phosphatase in tris-HCl buffer (pH 9.0), wheat (Triticum aestivum L.) phytase in potassium acetate buffer (pH 5.0), and nuclease P1 in potassium acetate buffer (pH 5.0) can be used to classify and quantify Po in animal manure. Background error associated with different pH and buffer systems is observed. In this study, we improved the enzymatic hydrolysis approach and tested its applicability for investigating Po in soils, recognizing that soil and manure differ in numerous physicochemical properties. We applied (i) acid phosphatase from potato (Solanum tuberosum L.), (ii) acid phosphatases from both potato and wheat germ, and (iii) both enzymes plus nuclease P1 to identify and quantify simple labile monoester P, phytate (myo-inositol hexakis phosphate)-like P, and DNA-like P, respectively, in a single pH/buffer system (100 mM sodium acetate, pH 5.0). This hydrolysis procedure released Po in sequentially extracted H2O, NaHCO3, and NaOH fractions of swine (Sus scrofa) manure, and of three sandy loam soils. Further refinement of the approach may provide a universal tool for evaluating hydrolyzable Po from a wide range of sources.

  14. Impact of fertilization by natural manure on the microbial quality of soil: Molecular approach.

    PubMed

    Faissal, Aziz; Ouazzani, N; Parrado, J R; Dary, M; Manyani, H; Morgado, B R; Barragán, M D; Mandi, L

    2017-09-01

    The quality of soil is strongly bound by several interactions between chemical and biological components, including microbial composition, which are a key importance for soil performance. Cultural activities have a huge induction on soil health, through both modification of physicochemical proprieties and changing on soil microbial communities. This usually affects the safety of soil, and then the crop production and water. In the present work, the information on bacterial community composition was determined from a set of 6 soils collected from 2 farms in agricultural land of Marrakech (Morocco), one of which used poultry manure (PM) and the other cow manure (CM) as fertilizers. To profile this structure of the bacterial community Denaturing Gradient Gel Electrophoresis (DGGE) of 16S rDNA fragments has been used. These amendments resulted in the appearance of several novel bands and different relative intensities of bands between the control station and other sites studied. The stations most affected are those receiving a supply of manure rather high, which results in an organic and bacterial load in the soil. The results showed a bacterial diversity very important indicating a fecal contamination like Bacteroides, Pseudomonas, Staphylococcus,… etc. Bacteria pertain to the phylum Firmicutes and Bacteroidetes were noted to be the dominant ribotype in amended soil. Moreover, this work demonstrates also the existence of pathogens strains in soil amended by poultry manure (PM) belonging to the Clostridiales order and Pseudomonadales. The pathogenic bacteria detected posing a hazard of human contagion when they are used for soil practice.

  15. Differential responses of soil nematode community to pig manure application levels in Ferric Acrisols

    PubMed Central

    Yang, Yi-Ru; Li, Xiao-Gang; Zhou, Zhi-Gao; Zhang, Tao-Lin; Wang, Xing-Xiang

    2016-01-01

    Excessive pig manure application probably degrades arable soil quality in some intensive pig farming areas. The responses of the nematode community to dosages of pig manure were investigated in Ferric Acrisols under 3-season peanut monoculture. Varying dosages of manure (1.75, 3.5, 7, 14 and 28 t·ha−1·yr−1) in combination with chemical fertilizer were applied to field plots, and chemical fertilizer alone was also applied as a control. With increasing manure application, the abundance of bacterivores and omnivores-predators increased, the abundance of plant parasites decreased, and fungivores abundance exhibited hump-shaped variation. Simpson diversity index and plant parasite index/maturity index of the nematode communities increased to a maximum level at a manure application rate of 3.5 t·ha−1·yr−1 and then sharply decreased. The changes in the soil nematode community were further determined to be correlated with chemical properties; available phosphorus had the strongest quadratic correlation with the two indices, implying that available phosphorus had a better indicative effect than other soil properties to nematode community. Available phosphorus in soil was deduced from 49 to 64 mg·kg−1 with the best nematode communities. Our results emphasized the importance of regular applications of manure in agriculture field to balance nematode diversity and build healthy agro-ecosystems. PMID:27734955

  16. Differential responses of soil nematode community to pig manure application levels in Ferric Acrisols

    NASA Astrophysics Data System (ADS)

    Yang, Yi-Ru; Li, Xiao-Gang; Zhou, Zhi-Gao; Zhang, Tao-Lin; Wang, Xing-Xiang

    2016-10-01

    Excessive pig manure application probably degrades arable soil quality in some intensive pig farming areas. The responses of the nematode community to dosages of pig manure were investigated in Ferric Acrisols under 3-season peanut monoculture. Varying dosages of manure (1.75, 3.5, 7, 14 and 28 t·ha‑1·yr‑1) in combination with chemical fertilizer were applied to field plots, and chemical fertilizer alone was also applied as a control. With increasing manure application, the abundance of bacterivores and omnivores-predators increased, the abundance of plant parasites decreased, and fungivores abundance exhibited hump-shaped variation. Simpson diversity index and plant parasite index/maturity index of the nematode communities increased to a maximum level at a manure application rate of 3.5 t·ha‑1·yr‑1 and then sharply decreased. The changes in the soil nematode community were further determined to be correlated with chemical properties; available phosphorus had the strongest quadratic correlation with the two indices, implying that available phosphorus had a better indicative effect than other soil properties to nematode community. Available phosphorus in soil was deduced from 49 to 64 mg·kg‑1 with the best nematode communities. Our results emphasized the importance of regular applications of manure in agriculture field to balance nematode diversity and build healthy agro-ecosystems.

  17. Surface runoff losses of phosphorus from Virginia soils amended with turkey manure using phytase and high available phosphorus corn diets.

    PubMed

    Penn, C J; Mullins, G L; Zelazny, L W; Warren, J G; McGrath, J M

    2004-01-01

    Many states have passed legislation that regulates agricultural P applications based on soil P levels and crop P uptake in an attempt to protect surface waters from nonpoint P inputs. Phytase enzyme and high available phosphorus (HAP) corn supplements to poultry feed are considered potential remedies to this problem because they can reduce total P concentrations in manure. However, less is known about their water solubility of P and potential nonpoint-source P losses when land-applied. This study was conducted to determine the effects of phytase enzyme and HAP corn supplemented diets on runoff P concentrations from pasture soils receiving surface applications of turkey manure. Manure from five poultry diets consisting of various combinations of phytase enzyme, HAP corn, and normal phytic acid (NPA) corn were surface-applied at 60 kg P ha(-1) to runoff boxes containing tall fescue (Festuca arundinacea Schreb.) and placed under a rainfall simulator for runoff collection. The alternative diets caused a decrease in manure total P and water soluble phosphorus (WSP) compared with the standard diet. Runoff dissolved reactive phosphorus (DRP) concentrations were significantly higher from HAP manure-amended soils while DRP losses from other manure treatments were not significantly different from each other. The DRP concentrations in runoff were not directly related to manure WSP. Instead, because the mass of manure applied varied for each treatment causing different amounts of manure particles lost in runoff, the runoff DRP concentrations were influenced by a combination of runoff sediment concentrations and manure WSP.

  18. Soil Nitrogen Response to Coupling Cover Crops with Manure Injection

    USDA-ARS?s Scientific Manuscript database

    Coupling winter small grain cover crops (CC) with manure (M) application may increase retention of manure nitrogen (N) in corn-soybean cropping systems. The objective of this research was to quantify soil N changes after application of liquid swine M (Sus scrofa L.) at target N rates of 112, 224, an...

  19. Co-pyrolysis of swine manure with agricultural plastic waste: Laboratory-scale study

    USDA-ARS?s Scientific Manuscript database

    Manure-derived biochar is the solid product resulting from pyrolysis of animal manures. It has considerable potential both to improve soil quality with high levels of nutrients and to reduce contaminants in water and soil. However, the combustible gas produced from manure pyrolysis generally does no...

  20. Use of manure to remediate eroded hill top soils

    USDA-ARS?s Scientific Manuscript database

    Soils damaged by the dustbowl years can still be found across the Western Central Great Plains. Most of these soils have lost top soil rich in organic matter. Our objective was to determine best management practices for remediating these soils using beef manure as an organic amendment. In a field ...

  1. Long-term application of fresh and composted manure increase tetracycline resistance in the arable soil of eastern China.

    PubMed

    Peng, Shuang; Wang, Yiming; Zhou, Beibei; Lin, Xiangui

    2015-02-15

    The aim of this study was to compare the occurrence, abundance, and diversity of tetracycline resistance genes (tet) in agricultural soils after 6 years' application of fresh or composted swine manure. Soil samples were collected from fresh or composted manure-treated farmland at three depths (0-5 cm, 5-10 cm, and 10-20 cm). Nine classes of tet genes [tetW, tetB(P), tetO, tetS, tetC, tetG, tetZ, tetL, and tetX] were detected; tetG, tetZ, tetL, and tetB(P) were predominant in the manure-treated soil. The abundances of tetB(P), tetW, tetC, and tetO were reduced, while tetG and tetL were increased by fertilizing with composted versus fresh manure; thus, the total abundance of tet genes was not significantly reduced by compost manuring. tetG was the most abundant gene in manure-treated soil; the predominant tetG genotypes shared high homology with pathogenic bacteria. The tetG isolates were more diverse in soils treated with fresh versus composted manure, although the residual tet genes in composted manure remain a pollutant and produce a different influence on the tet gene resistome in field soil. Copyright © 2014 Elsevier B.V. All rights reserved.

  2. Simultaneous determination of veterinary antibiotics and hormone in broiler manure, soil and manure compost by liquid chromatography-tandem mass spectrometry.

    PubMed

    Ho, Y B; Zakaria, Mohamad Pauzi; Latif, Puziah Abdul; Saari, Nazamid

    2012-11-02

    A multi-residue analytical method was developed to quantify nine antibiotics and one hormone in soil, broiler manure and manure compost. The developed method was based on ultrasonic extraction with MeOH:ACN:EDTA:McIlvaine buffer, solid phase extraction (SPE) using HLB (3 cc/60 mg) cartridge, followed by instrumental analysis using liquid chromatography-tandem mass spectrometry (LC-MS/MS) with 25 min total run time. It was validated and tested on soil, broiler manure and manure compost samples and showed that the method is able to simultaneously detect and quantify the target analytes with good selectivity and sensitivity. The developed method was linear in a concentration range from its instrumental quantification limit (IQL) to 500 ng/mL, with correlation coefficients higher than 0.999. The overall method performance was good for the majority of the analytes, with recoveries range from 63% to 121% in all the sample matrices. The method quantification limit (MQL) for the 10 target analytes in the soil, broiler manure and manure compost samples were 2-10, 3-16 and 5-15 μg/kg dry weight (DW), respectively. The method has also included tilmicosin, an antibiotic known to be reported in the environment for the first time. The developed method was then applied on broiler manure samples and its relative manure amended agricultural soil samples to identify and quantify veterinary antibiotic and hormone residues in the environment. These analytes were detected in broiler manure and soil samples, with maximum concentrations reaching up to 78516.1 μg/kg DW (doxycycline) and 1331.4 μg/kg DW (flumequine), respectively. The results showed that the method can potentially be adopted for the analysis of veterinary antibiotic and hormone wastes in solid environmental matrices.

  3. Environmental assay on the effect of poultry manure application on soil organisms in agroecosystems.

    PubMed

    Delgado, M; Rodríguez, C; Martín, J V; Miralles de Imperial, R; Alonso, F

    2012-02-01

    This paper reports the effects produced on the organisms of the soil (plants, invertebrates and microorganisms), after the application of two types of poultry manure (sawdust and straw bed) on an agricultural land. The test was made using a terrestrial microcosm, Multi-Species Soil System (MS3) developed in INIA. There was no difference in the germination for any of the three species of plants considered in the study. The biomass was increased in the wheat (Triticum aestivum) coming from ground treated with both kinds of poultry manure. Oilseed rape (Brasica rapa) was not affected and regarding vetch (Vicia sativa) only straw poultry manure showed significant difference. For length only Vicia sativa was affected showing a reduction when straw was exposed to poultry manure. When the effect on invertebrates was studied, we observed a reduction in the number of worms during the test, especially from the ground control (13.7%), higher than in the ground with sawdust poultry manure (6.7%), whereas in the ground with straw poultry manure, there was no reduction. The biomass was affected and at the end of the test it was observed that while the reduction of worms in the ground control was about 48%, the number of those that were in the ground with sawdust poultry manure or straw poultry manure decreased by 41% and 22% respectively. Finally, the effects on microorganisms showed that the enzymatic activities: dehydrogenase (DH) and phosphatase and basal respiration rate increased at the beginning of the test, and the differences were statistically significant compared with the values of the control group. During the test, all these parameters decreased (except DH activities) but they were always higher than in the ground control. This is why it is possible to deduce that the contribution of poultry manure caused an improvement in the conditions of fertilization and also for the soil. Copyright © 2011 Elsevier B.V. All rights reserved.

  4. A soil-inventory of agricultural used soils of Germany

    NASA Astrophysics Data System (ADS)

    Siebner, Clemens; Gensior, Andreas; Evertsbusch, Sven; Freibauer, Annette; Flessa, Heiner

    2010-05-01

    In the framework of UNFCCC reports for greenhouse gas emissions of land use and land use change also soil organic carbon stocks and stock changes of have to be reported. Since 1990 a forest soil inventory exists for Germany, but similar data are still missing for agricultural land. Up till now, a very rough estimation of the soil organic carbon stocks based on the soil map of Germany at the scale of 1:1,000,000 and estimated soil organic carbon contents and bulk densities have been used for the national inventory reports. Now we are starting an extended agricultural soil inventory for Germany which is explicitly designed to detect soil organic carbon stocks and stock changes. We will use a grid of 8x8 km, like it was used for the forest soil inventory. In order to extrapolate from point data and perform regionalisations, not only soil type, soil parent material and basic climate parameters will be taken into account, but under agricultural land use different agricultural management practices will be considered. Management data, like crop rotation, depth and intensity of soil tillage and application of fertilizers, manure and composts are collected from farmers during the inventory via questionnaires. It was shown that those data are essential to estimate and extrapolate point data to report soil organic carbon stocks and stock changes on regional scale. The concept of this soil carbon inventory will be presented.

  5. A multi-site, multi-year examination of factors affecting the persistence of attenuated O157- and non-pathogenic Escherichia coli in manure-amended soils in the mid-Atlantic United States

    USDA-ARS?s Scientific Manuscript database

    The addition of untreated biological soil amendments (BSAs), including dairy cattle manure (DM), poultry litter (PL), and horse manure (HM), to soils provides nutrients for crops in conventional and organic agriculture, but may also introduce enteric pathogens present in manure to crops. The U.S. Fo...

  6. Phosphorus Speciation in Manure and Manure-Amended Soils Using XANES Spectroscopy

    SciTech Connect

    Sato,S.; Solomon, D.; Hyland, C.; Ketterings, Q.; Lehmann, J.

    2005-01-01

    Previous studies suggested an increase in the proportion of calcium phosphates (CaP) of the total phosphorus (P) pool in soils with a long-term poultry manure application history versus those with no or limited application histories. To understand and predict long-term P accumulation and release dynamics in these highly amended soils, it is important to understand what specific P species are being formed. We assessed forms of CaP formed in poultry manure and originally acidic soil in response to different lengths of mostly poultry manure applications using P K-edge X-ray absorption near-edge structure (XANES) spectroscopy. Phosphorus K-edge XANES spectra of poultry manure showed no evidences of crystalline P minerals but dominance of soluble CaP species and free and weakly bound phosphates (aqueous phosphate and phosphate adsorbed on soil minerals). Phosphate in an unamended neighboring forest soil (pH 4.3) was mainly associated with iron (Fe) compounds such as strengite and Fe-oxides. Soils with a short-term manure history contained both Fe-associated phosphates and soluble CaP species such as dibasic calcium phosphate (DCP) and amorphous calcium phosphate (ACP). Long-term manure application resulted in a dominance of CaP forms confirming our earlier results obtained with sequential extractions, and a transformation from soluble to more stable CaP species such as {beta}-tricalcium calcium phosphate (TCP). Even after long-term manure application (>25 yr and total P in soil up to 13 307 mg kg{sup -1}), however, none of the manure-amended soils showed the presence of crystalline CaP. With a reduction or elimination of poultry manure application to naturally acidic soils, the pH of the soil is likely to decrease, thereby increasing the solubility of Ca-bonded inorganic P minerals. Maintaining a high pH is therefore an important strategy to minimize P leaching in these soils.

  7. Ecotoxicological evaluation of swine manure disposal on tropical soils in Brazil.

    PubMed

    Segat, Julia Corá; Alves, Paulo Roger Lopes; Baretta, Dilmar; Cardoso, Elke Jurandy Bran Nogueira

    2015-12-01

    Swine production in Brazil results in a great volume of manure that normally is disposed of as agricultural fertilizer. However, this form of soil disposal, generally on small farms, causes the accumulation of large amounts of manure and this results in contaminated soil and water tables. To evaluate the effects of increasing concentrations of swine manure on earthworms, several ecotoxicological tests were performed using Eisenia andrei as test organism in different tropical soils, classified respectively as Ultisol, Oxisol, and Entisol, as well as Tropical Artificial Soil (TAS). The survival, reproduction and behavior of the earthworms were evaluated in experiments using a completely randomized design, with five replications. In the Ultisol, Oxisol and TAS the swine manure showed no lethality, but in the Entisol it caused earthworm mortality (LOEC=45 m(3)ha(-1)). In the Entisol, the waste reduced the reproductive rate and caused avoidance behavior in E. andrei (LOEC=30 m(3)ha(-1)) even in lower concentrations. The Entisol is extremely sandy, with low cation exchange capacity (CEC), and this may be the reason for the higher toxicity on soil fauna, with the soil not being able to hold large amounts of pollutants (e.g. toxic metals), but leaving them in bioavailable forms. These results should be a warning of the necessity to consider soil parameters (e.g. texture and CEC) when evaluating soil contamination by means of ecotoxicological assays, as there still are no standards for natural soils in tropical regions. E. andrei earthworms act as indicators for a soil to support disposal of swine manure without generating harm to agriculture and ecosystems. Copyright © 2015 Elsevier Inc. All rights reserved.

  8. Effects of poultry manure, compost, and biochar amendments on soil nitrogen dynamics in maize production systems

    NASA Astrophysics Data System (ADS)

    Ryals, R.; Tang, J.; Hastings, M. G.; Dell, C. J.; Sims, T.

    2013-12-01

    Intensification of animal agriculture has profound impacts on the global and local biogeochemistry of nitrogen (N), resulting in consequences to environmental and human health. In the Chesapeake Bay watershed, intensive agriculture is the primary contributor to N pollution, with animal manure comprising more than half of N from agriculture. Management interventions may play an important role in mitigating reactive N pollution in the Bay watershed. The objective of our research was to test management strategies that maximize benefits of poultry manure as an agricultural resource while minimizing it as a source of reactive nitrogen to the atmosphere and ground and surface waters. We conducted field experiments in two agricultural regions of the Chesapeake Bay watershed (Georgetown, Delaware and State College, Pennsylvania) to explore the effects of poultry manure amendments on gaseous N losses and soil N transformations. Treatments were applied at rates needed to meet the plant N demand at each site and included unfertilized controls, fertilizer N (urea), and raw, composted, or and biocharred poultry manure. The fate of the N from all sources was followed throughout the growing season. Global greenhouse gases emitted from soil (nitrous oxide [N2O] and carbon dioxide [CO2]) and regional air pollutants (nitrogen oxides [NOx] and ammonia [NH3]) were measured. Gas measurements were coupled with data on treatment effects on temperature, moisture, and concentrations of nitrate (NO3¬-) and ammonium (NH4+) in surface soils (0-10 cm). Soil NO3- and NH4+ were also measured approximately monthly in the soil profile (0-10, 10-30, 30-50, 50-70, and 70-100 cm) as an index of leaching potential. Plant N uptake and grain production were also quantified to quantify crop N use efficiency and compare measured N losses for each N source. Our results suggest that the form of poultry manure amendments can affect the magnitude of reactive N losses to the environment.

  9. Clays Can Decrease Gaseous Nutrient Losses from Soil-Applied Livestock Manures.

    PubMed

    Pratt, Chris; Redding, Matthew; Hill, Jaye; Brown, Grant; Westermann, Maren

    2016-03-01

    Clays could underpin a viable agricultural greenhouse gas (GHG) abatement technology given their affinity for nitrogen and carbon compounds. We provide the first investigation into the efficacy of clays to decrease agricultural nitrogen GHG emissions (i.e., NO and NH). Via laboratory experiments using an automated closed-vessel analysis system, we tested the capacity of two clays (vermiculite and bentonite) to decrease NO and NH emissions and organic carbon losses from livestock manures (beef, pig, poultry, and egg layer) incorporated into an agricultural soil. Clay addition levels varied, with a maximum of 1:1 to manure (dry weight). Cumulative gas emissions were modeled using the biological logistic function, with 15 of 16 treatments successfully fitted ( < 0.05) by this model. When assessing all of the manures together, NH emissions were lower (×2) at the highest clay addition level compared with no clay addition, but this difference was not significant ( = 0.17). Nitrous oxide emissions were significantly lower (×3; < 0.05) at the highest clay addition level compared with no clay addition. When assessing manures individually, we observed generally decreasing trends in NH and NO emissions with increasing clay addition, albeit with widely varying statistical significance between manure types. Most of the treatments also showed strong evidence of increased C retention with increasing clay additions, with up to 10 times more carbon retained in treatments containing clay compared with treatments containing no clay. This preliminary assessment of the efficacy of clays to mitigate agricultural GHG emissions indicates strong promise.

  10. Effects of organic dairy manure amendment on soil phosphatase activities

    USDA-ARS?s Scientific Manuscript database

    Organic dairy production is increasing in the U.S. due to concerns over environmental, human, and animal health. It is well known that the application of livestock manure to soil can influence enzyme activities involved in nutrient cycling and soil fertility, such as soil phosphatases; however, orga...

  11. Geographic variations of soil phosphorus induced by long-term land and manure nutrient management practices

    NASA Astrophysics Data System (ADS)

    Dao, Thanh

    2014-05-01

    Most natural and agricultural ecosystems are deficient in phosphorus (P), and supplemental P must be provided to attain optimal levels of agronomic production. Animal manure is often used to supply needed plant nutrients to enhance production of feed and fiber crops for human and livestock consumption. Soils have been treated with large amounts of P-enriched manure, and have shown elevated P levels in watersheds where there is a high density of intensive confined animal agriculture. Long-term additions can have lasting effects on the geographic distribution of soil microbes associated with the turnover of major soil nutrients, in particular non-mobile one such as P. We determined the distribution of soil P forms in a 10-ha no-till field that received annual additions of dairy manure at 0, 15, and 30 kg P ha-1 at the field scale for 16 consecutive years. Spectroscopic analyses of the near-surface zone were performed by X-ray fluorescence in soil cores taken to a depth of 0.2 m. Geostatistical methods were used to determine the spatial structure of the soil compositional data. Soil X-ray fluorescence spectral attributes were obtained based on a set of five parallel transects established across five experimental blocks, i.e., a 5 × 5 rectangular grid pattern. Three subsets of each soil attribute were identified for the three rates of manure addition. Long-term manure addition, albeit liquid manure, resulted in significant variability in soil P distribution in the near surface zone. The heterogeneity persisted over years of continuous no-tillage management. Therefore, a high density of geo-referenced soil measurements must be made to estimate the status of a required plant nutrient, especially a non-mobile nutrient in soil. A large number of timely measurements would require a rapid geo-referenced soil sensing spectroscopic method such as X-ray fluorescence to manage in near real-time the observed spatial variability of manure-treated fields.

  12. Soil-Plant Nutrient Interactions on Manure-Enriched Calcareous Soils

    USDA-ARS?s Scientific Manuscript database

    Nutrient accumulations on heavily manured soils can trigger soil and plant nutrient interactions. The goal of the study was to determine the current impact of dairy manure applications on nutrient concentrations in soil and tissue for irrigated corn silage crops grown in Southern Idaho. At harvest,...

  13. Combustible gas and biochar production from co-pyrolysis of agricultural plastic wastes and animal manures

    USDA-ARS?s Scientific Manuscript database

    Researchers report that manure-derived biochar has considerable potential both for improving soil quality and reducing water pollution. One of obstacles in obtaining manure biochar is its high energy requirement for pyrolyzing wet and low-energy-density animal manures. The combustible gas produced f...

  14. Composted Cattle Manure Increases Microbial Activity and Soil Fertility More Than Composted Swine Manure in a Submerged Rice Paddy.

    PubMed

    Das, Suvendu; Jeong, Seung Tak; Das, Subhasis; Kim, Pil Joo

    2017-01-01

    Livestock waste composts with minimum inorganic fertilizer as a soil amendment in low-input intensive farming are a feasible agricultural practice to improve soil fertility and productivity and to mitigate soil degradation. The key benefits of the practice rely on the activities of soil microorganisms. However, the role of different livestock composts [composted cattle manure (CCM) vs. composted swine manure (CSM)] on soil microbes, their activities and the overall impact on soil fertility and productivity in a flooded paddy remains elusive. This study compares the effectiveness of CCM and CSM amendment on bacterial communities, activities, nutrient availability, and crop yield in a flooded rice cropping system. We used deep 16S amplicon sequencing and soil enzyme activities to decipher bacterial communities and activities, respectively. Both CCM and CSM amendment significantly increased soil pH, nutrient availability (C, N, and P), microbial biomass, soil enzyme activities indicative for C and N cycles, aboveground plant biomass and grain yield. And the increase in above-mentioned parameters was more prominent in the CCM treatment compared to the CSM treatment. The CCM amendment increased species richness and stimulated copiotrophic microbial groups (Alphaproteobacteria, Betaproteobacteria, and Firmicutes) which are often involved in degradation of complex organic compounds. Moreover, some dominant species (e.g., Azospirillum zeae, Azospirillum halopraeferens, Azospirillum rugosum, Clostridium alkalicellulosi, Clostridium caenicola, Clostridium termitidis, Clostridium cellulolyticum, Magnetospirillum magnetotacticum, Pleomorphomonas oryzae, Variovorax boronicumulans, Pseudomonas xanthomarina, Pseudomonas stutzeri, and Bacillus niacini) which have key roles in plant growth promotion and/or lignocellulose degradation were enhanced under CCM treatment compared to CSM treatment. Multivariate analysis revealed that soil pH and available carbon (C) and nitrogen (N) were

  15. Composted Cattle Manure Increases Microbial Activity and Soil Fertility More Than Composted Swine Manure in a Submerged Rice Paddy

    PubMed Central

    Das, Suvendu; Jeong, Seung Tak; Das, Subhasis; Kim, Pil Joo

    2017-01-01

    Livestock waste composts with minimum inorganic fertilizer as a soil amendment in low-input intensive farming are a feasible agricultural practice to improve soil fertility and productivity and to mitigate soil degradation. The key benefits of the practice rely on the activities of soil microorganisms. However, the role of different livestock composts [composted cattle manure (CCM) vs. composted swine manure (CSM)] on soil microbes, their activities and the overall impact on soil fertility and productivity in a flooded paddy remains elusive. This study compares the effectiveness of CCM and CSM amendment on bacterial communities, activities, nutrient availability, and crop yield in a flooded rice cropping system. We used deep 16S amplicon sequencing and soil enzyme activities to decipher bacterial communities and activities, respectively. Both CCM and CSM amendment significantly increased soil pH, nutrient availability (C, N, and P), microbial biomass, soil enzyme activities indicative for C and N cycles, aboveground plant biomass and grain yield. And the increase in above-mentioned parameters was more prominent in the CCM treatment compared to the CSM treatment. The CCM amendment increased species richness and stimulated copiotrophic microbial groups (Alphaproteobacteria, Betaproteobacteria, and Firmicutes) which are often involved in degradation of complex organic compounds. Moreover, some dominant species (e.g., Azospirillum zeae, Azospirillum halopraeferens, Azospirillum rugosum, Clostridium alkalicellulosi, Clostridium caenicola, Clostridium termitidis, Clostridium cellulolyticum, Magnetospirillum magnetotacticum, Pleomorphomonas oryzae, Variovorax boronicumulans, Pseudomonas xanthomarina, Pseudomonas stutzeri, and Bacillus niacini) which have key roles in plant growth promotion and/or lignocellulose degradation were enhanced under CCM treatment compared to CSM treatment. Multivariate analysis revealed that soil pH and available carbon (C) and nitrogen (N) were

  16. Distribution of phosphorus in manure slurry and its infiltration after application to soils.

    PubMed

    Vadas, Peter A

    2006-01-01

    Computer models help identify agricultural areas where P transport potential is high, but commonly used models do not simulate surface application of manures and P transport from manures to runoff. As part of an effort to model such P transport, we conducted manure slurry separation and soil infiltration experiments to determine how much slurry P infiltrates into soil after application but before rain, thus becoming less available to runoff. We applied dairy and swine slurry to soil columns and after both 24 and 96 h analyzed solids remaining on the soil surface for dry matter, total phosphorus (TP), and water-extractable inorganic (WEIP) and organic (WEOP) phosphorus. We analyzed underlying soils for Mehlich-3 and water-extractable P. We also conducted slurry separation experiments by sieving, centrifuging, and suction-filtering to determine which method could easily estimate slurry P infiltration into soils. About 20% of slurry solids and 40 to 65% of slurry TP and WEIP infiltrated into soil after application, rendering this P less available to transport in runoff. Slurry separation by suction-filtering through a screen with 0.75-mm-diameter openings was the best method to estimate this slurry P infiltration. Measured quantities of manure WEOP changed too much during experiments to estimate WEOP infiltration into soil or what separation method can approximate infiltration. Applying slurries to soils always increased soil P in the top 0 to 1 cm of soil, frequently in the 1- to 2-cm depth of soil, but rarely below 2 cm. Future research should use soils with coarser texture or large macropores, and slurry with low dry matter content (1-2%).

  17. Rapid transport and transformation of phosphorus species during the leaching of poultry manure amended soil

    NASA Astrophysics Data System (ADS)

    Giles, Courtney; Cade-Menun, Barbara; Liu, Corey; Hill, Jane

    2015-04-01

    The loss of phosphorus (P) from soils due to leaching is a major concern in heavily fertilized agricultural regions. The mobility and transformation of P species will depend on the source of manure fertilizer, leaching regime, and the extent of soil P saturation within the soil profile. We investigate spatial and temporal changes in the distribution of P species within a poultry manure-amended soil at two depths (0-5, 10-15 cm) as well as leachate P fractions during 10 weeks of leaching. Leachate P was primarily composed of dissolved fractions (soluble reactive P; dissolved unreactive P) and reached a maximum in the fourth week of leaching. In soils, the degree of P saturation (80%) and water extractable P (9 mg kg-1) were also greatest in week 4. 31P NMR spectra of the 0-5 cm depth indicate that surface soils were most similar to the poultry manure in week 4. During peak leaching, the proportion of orthophosphate (OrthoP) at the soil surface (0-5 cm; 80%) was greater than that from the lowest depth (10-15 cm; 72%), which contained relatively larger proportions of monoester-(17%) and diester-P classes (10%). Poultry manure likely contributed to the mobile pool of P species, including OrthoP, myo-inositol hexakisphosphate (myo-IHP), and nucleic acids. The appearance of neo- and D-chiro-IHP, as well as phospholipid signals during the leaching period indicate possible short-term (<10 week) contributions of organic P to the generation and leaching of OrthoP, under P-saturated conditions. Further work is needed to determine how fertilization and leaching will affect the mobility and transformation of P species across a wider range of soil types. Keywords: Phytate, organic phosphorus, degree of phosphorus saturation, soil, leachate, poultry manure

  18. Occurrence of (fluoro)quinolones and (fluoro)quinolone resistance in soil receiving swine manure for 11 years.

    PubMed

    Xu, Yonggang; Yu, Wantai; Ma, Qiang; Zhou, Hua

    2015-10-15

    Because of the widespread use of antibiotics in animal breeding, the agricultural application of animal manure can lead to the introduction of antibiotics, antibiotic-resistant bacteria and antibiotic resistance genes to the soil and surrounding environment, which may pose a threat to public health. In this study, we investigated the status of (fluoro)quinolone (FQ) residues and FQ resistance levels in soil with and without receiving long-term swine manure. Six FQs (pipemidic acid, lomefloxacin, enrofloxacin, norfloxacin, ciprofloxacin, and ofloxacin) were only detected in manured soil, with individual concentrations ranging from below the detection limit to 27.2 μg kg(-1) and increasing with the increase in swine manure application rates. Higher load rates of swine manure yielded a higher number of ciprofloxacin-resistant (CIPr) bacteria after spreading. A total of 24 CIPr bacterial isolates were obtained from the tested soil, which belonged to four phyla (Proteobacteria, Firmicutes, Actinobacteria, and Bacteroidetes) or were related to nine different genera. Only 18 isolates from manured soil were positive for five plasmid-mediated quinolone resistance (PMQR) genes (aac(6')-Ib-cr, qnrD, qepA, oqxA, and oqxB). To our knowledge, this study is the first to examine the occurrence of PMQR genes in FQ-resistant bacteria from the soil environment. A similar result was observed for the total DNA from soil, with the exception of aac(6')-Ib being detected in the control sample. The absolute and relative abundances of total PMQR genes also increased with fertilization quantity. Significant correlations were observed between FQ resistance levels and FQ concentrations. These results indicated that the agricultural application of swine manure led to FQ residues and enhanced FQ resistance. This investigation provides baseline data on FQ resistance profiles in soils receiving long-term swine manure. Copyright © 2015. Published by Elsevier B.V.

  19. Quantifying Bioactive P Pools in Fertilized and Manure-Amended Soils by Purified Phytic-Acid High Affinity Aspergillus phosphohydrolases

    USDA-ARS?s Scientific Manuscript database

    In areas of intensive animal agriculture, repeated land application of manure resulted in elevated soil concentrations of inorganic and organic phosphorus (P) myo-Inositol hexaphosphate, lower phosphomonoesters are the most abundant organic P compounds. Such P-enriched soils are potential pollution...

  20. Influence of composted dairy manure and perennial forage on soil carbon and nitrogen fractions during transition into organic management

    USDA-ARS?s Scientific Manuscript database

    Composted dairy manure (CDM) is among the management practices used in transitioning from a conventional to an organic agricultural system. The objectives of this study are to evaluate the impact of several organic nitrogen (N) sources on: (i) soil organic C (SOC) and soil total N (STN) content; (ii...

  1. Effect of Bovine Manure on Fecal Coliform Attachment to Soil and Soil Particles of Different Sizes▿

    PubMed Central

    Guber, Andrey K.; Pachepsky, Yakov A.; Shelton, Daniel R.; Yu, Olivia

    2007-01-01

    Manure-borne bacteria can be transported in runoff as free cells, cells attached to soil particles, and cells attached to manure particles. The objectives of this work were to compare the attachment of fecal coliforms (FC) to different soils and soil fractions and to assess the effect of bovine manure on FC attachment to soil and soil fractions. Three sand fractions of different sizes, the silt fraction, and the clay fraction of loam and sandy clay loam soils were separated and used along with soil samples in batch attachment experiments with water-FC suspensions and water-manure-FC suspensions. In the absence of manure colloids, bacterial attachment to soil, silt, and clay particles was much higher than the attachment to sand particles having no organic coating. The attachment to the coated sand particles was similar to the attachment to silt and clay. Manure colloids in suspensions decreased bacterial attachment to soils, clay and silt fractions, and coated sand fractions, but did not decrease the attachment to sand fractions without the coating. The low attachment of bacteria to silt and clay particles in the presence of manure colloids may cause predominantly free-cell transport of manure-borne FC in runoff. PMID:17369341

  2. Temporal changes of antibiotic-resistance genes and bacterial communities in two contrasting soils treated with cattle manure.

    PubMed

    Hu, Hang-Wei; Han, Xue-Mei; Shi, Xiu-Zhen; Wang, Jun-Tao; Han, Li-Li; Chen, Deli; He, Ji-Zheng

    2016-02-01

    The emerging environmental spread of antibiotic-resistance genes (ARGs) and their subsequent acquisition by clinically relevant microorganisms is a major threat to public health. Animal manure has been recognized as an important reservoir of ARGs; however, the dissemination of manure-derived ARGs and the impacts of manure application on the soil resistome remain obscure. Here, we conducted a microcosm study to assess the temporal succession of total bacteria and a broad spectrum of ARGs in two contrasting soils following manure application from cattle that had not been treated with antibiotics. High-capacity quantitative PCR detected 52 unique ARGs across all the samples, with β-lactamase as the most dominant ARG type. Several genes of soil indigenous bacteria conferring resistance to β-lactam, which could not be detected in manure, were found to be highly enriched in manure-treated soils, and the level of enrichment was maintained over the entire course of 140 days. The enriched β-lactam resistance genes had significantly positive relationships with the relative abundance of the integrase intI1 gene, suggesting an increasing mobility potential in manure-treated soils. The changes in ARG patterns were accompanied by a significant effect of cattle manure on the total bacterial community compositions. Our study indicates that even in the absence of selective pressure imposed by agricultural use of antibiotics, manure application could still strongly impact the abundance, diversity and mobility potential of a broad spectrum of soil ARGs. Our findings are important for reliable prediction of ARG behaviors in soil environment and development of appropriate strategies to minimize their dissemination.

  3. Leaching behavior of veterinary antibiotics in animal manure-applied soils.

    PubMed

    Pan, Min; Chu, L M

    2017-02-01

    Agricultural fields worldwide are being contaminated by the escalating application of veterinary antibiotics (VAs) via animal manure and biosolids applied as fertilizers or of wastewater for irrigation, resulting in soil degradation and damage to the health of terrestrial environments. This paper describes a series of column studies investigating the leaching behavior of five VAs, tetracycline (TC), sulfamethazine (SMZ), norfloxacin (NOR), erythromycin (ERY) and chloramphenicol (CAP), under different simulated rainfall conditions that could occur in agricultural environments. Our aim was to explore the effects of acid rain and torrential rain on the leaching of different VAs and to determine their leaching behaviors along the soil profile. The results showed that acid rain accelerated the accumulation of VAs from animal manure in surface soil while long rainfall durations promoted the downward migration of VAs in soil. Under acid rain conditions, a higher concentration of VAs remained in the animal manure. More VAs were eluted to deeper soil layers and the leachate under extreme rainfall conditions. The leachability of VAs was higher in sandy soil than in clay or loamy soil. SMZ and ERY posed a higher risk to deeper soil layers and groundwater, while NOR and TC tended to persist in surface soil, which can be explained by their different physicochemical properties in soil. Moreover, the general trends from two model assessments and soil column measurements appeared to be in agreement. SMZ had a high leachability, while NOR tended to accumulate in soils. This study provided vital insight into the persistence mechanisms of VAs in terrestrial environments and their potential risks to soils and groundwater. Copyright © 2016 Elsevier B.V. All rights reserved.

  4. Microbial response to repeated treatments of manure containing sulfadiazine and chlortetracycline in soil.

    PubMed

    Fang, Hua; Han, Yu L; Yin, Yuan M; Jin, Xiang X; Wang, Shao Y; Tang, Fei F; Cai, Lin; Yu, Yun L

    2014-01-01

    Substantive addition of antibiotic-contaminated manure to agricultural soil may lead to "persistent" residues of antibiotics and may affect soil health. Therefore, this study examines the effects of repeated manure treatments containing sulfadiazine (SDZ) and chlortetracycline (CTC) residues, both individually and combined, on the functional diversity and structure of soil microbial communities in the soils under laboratory conditions. The average well color development (AWCD), Simpson diversity index (1/D, dominant populations), Shannon-Wiener diversity index (H', richness), and McIntosh diversity index (U, evenness) in the antibiotics-treated soils decreased in the first 60-day treatment and then gradually recovered or even exceeded the initial level in the unamended soils with increasing treatment frequency. A total of 11 specific bands in temperature gradient gel electrophoresis (TGGE) profiles were observed and sequence analyzed for five repeated treatments, and most of them belonged to the phyla Firmicutes, Actinobacteria, and Proteobacteria. These results indicate that repeated treatments of manure containing SDZ and CTC residues can alter soil microbial community structure, although they have a temporary suppression effect on soil microbial functional diversity.

  5. Effects of poultry manure amendment on soil phosphorus fractions, phosphatase activity, and phosphorus uptake

    USDA-ARS?s Scientific Manuscript database

    Poultry manure (PM) contains a large amount of P, and adding this manure to soil can impact the availability of native soil P to plants. To investigate the effects of PM on soil P availability, we grew ryegrass (Lolium perenne) in greenhouse pots amended with poultry manure. Biomass was harvested at...

  6. Co-pyrolysis of swine manure with agricultural plastic waste: laboratory-scale study.

    PubMed

    Ro, Kyoung S; Hunt, Patrick G; Jackson, Michael A; Compton, David L; Yates, Scott R; Cantrell, Keri; Chang, SeChin

    2014-08-01

    Manure-derived biochar is the solid product resulting from pyrolysis of animal manures. It has considerable potential both to improve soil quality with high levels of nutrients and to reduce contaminants in water and soil. However, the combustible gas produced from manure pyrolysis generally does not provide enough energy to sustain the pyrolysis process. Supplementing this process may be achieved with spent agricultural plastic films; these feedstocks have large amounts of available energy. Plastic films are often used in soil fumigation. They are usually disposed in landfills, which is wasteful, expensive, and environmentally unsustainable. The objective of this work was to investigate both the energetics of co-pyrolyzing swine solids with spent plastic mulch films (SPM) and the characteristics of its gas, liquid, and solid byproducts. The heating value of the product gas from co-pyrolysis was found to be much higher than that of natural gas; furthermore, the gas had no detectable toxic fumigants. Energetically, sustaining pyrolysis of the swine solids through the energy of the product gas could be achieved by co-pyrolyzing dewatered swine solids (25%m/m) with just 10% SPM. If more than 10% SPM is used, the co-pyrolysis would generate surplus energy which could be used for power generation. Biochars produced from co-pyrolyzing SPM and swine solid were similar to swine solid alone based on the surface area and the (1)H NMR spectra. The results of this study demonstrated the potential of using pyrolysis technology to manage two prominent agricultural waste streams (SPM and swine solids) while producing value-added biochar and a power source that could be used for local farm operations. Published by Elsevier Ltd.

  7. Effects of different green manures on soil biological properties and maize yield.

    PubMed

    Tejada, M; Gonzalez, J L; García-Martínez, A M; Parrado, J

    2008-04-01

    The utilization of green manures as alternatives to reduce the use of mineral fertilizers is considered a good agricultural practice. However, the effect of each green manure on soil properties and crop yield depends upon its chemical composition. The main objective of this work was to study the effect of incorporating three green manures originating from residues of Trifolium pratense, L. (TP), Brassica napus, L. (BN), and the mixture of TP+BN at rates of 5384 and 8973 kg C ha(-1), on soil biological properties (soil microbial biomass-C, soil respiration and soil enzymatic activities), nutrition (leaf N, P and K concentration, pigments and soluble carbohydrate concentrations) and yield parameters of maize (Zea mays cv. Tundra) crop for four years on an Typic Xerofluvent located near Sevilla (Guadalquivir Valley, Andalusia, Spain). All green manures had a positive effect on the soil biological properties, plant nutrition an crop yield parameters, although at the end of the experimental period and at the high organic matter rate, the soil microbial biomass and dehydrogenase, urease, beta-glucosidase, phosphatase and arylsulfatase activities increased more significantly in the TP amended soils (79.2%, 92.1%, 93.9%, 99.3%, 87.9% and 96%, respectively) respect to the control soil, followed by TP+BN amended soils (77.3%, 90.9%, 92.8%, 99.1%, 84.4% and 95.7%, respectively) and BN amended soils (76%, 90.1%, 91.7%, 99%, 83.2% and 95.2%, respectively). Since these soil enzymatic activities measured are responsible for important cycles such as C, N, P and S, an increase of leaf N, P an K contents and pigments and soluble carbohydrate contents were highest in TP amended soils, followed by TP+BN and BN treatments. The application of TP in soils at high doses increased the grain protein concentration, number of grains corncob(-1) and crop yield 44.6%, 6.3% and 22.1%, respectively, compared with the control soil, followed by TP+BN treatment (41.7%, 5.7% and 20.8%, respectively

  8. Residues and risks of veterinary antibiotics in protected vegetable soils following application of different manures.

    PubMed

    Zhang, Haibo; Zhou, Yang; Huang, Yujuan; Wu, Longhua; Liu, Xinghua; Luo, Yongming

    2016-06-01

    The protected vegetable farming is a style of high frequent rotation farming which requires a huge amount of fertilizers to maintain soil fertility. A total of 125 surface soils covering from east to west of China were sampled for the analysis of 17 antibiotics in order to identify antibiotics contamination caused by long-term manures application. The results indicate that the agricultural land has accumulated a statistically significantly higher antibiotics concentration than conventional open croplands. The maximum oxytetracycline concentration was 8400 μg kg(-1), the highest level that has ever been reported for oxytetracycline in soils. The residual concentration is decided by both plant duration and manure type. Short-term (<5 years) planting shows the highest residues of tetracyclines and fluoroquinolones in the soils. The organic farming characteristic of applying commercial compost as a single fertilizer in planting shows the lowest antibiotics residue in the soils on the whole. Principal component analysis suggests that the various combinations of antibiotic compounds in the soil may be used to trace the manure source. The antibiotics in soil may threaten water quality through contamination by diffusion. Ciprofloxacin and sulfachinoxalin are calculated to be a higher migration risk to surface waters, hence their environmental fate requires further study. Copyright © 2016 Elsevier Ltd. All rights reserved.

  9. Dry Co-Digestion of Poultry Manure with Agriculture Wastes.

    PubMed

    Abouelenien, Fatma; Namba, Yuzaburo; Nishio, Naomichi; Nakashimada, Yutaka

    2016-03-01

    This study tested the effect on thermophilic and mesophilic digestion of poultry manure (PM) or treated poultry manure (TPM) by the addition of agriculture wastes (AWS) as a co-substrate under dry conditions. PM was co-digested with a mixture of AWS consisting of coconut waste, cassava waste, and coffee grounds. Results were increased methane content in biogas, with decreased ammonia accumulation and volatile acids. The highest performance occurred under mesophilic conditions, with a 63 and 41.3 % increase in methane production from addition of AWS to TPM (562 vs. 344 mL g VS(-1) from control) and PM (406 vs. 287 mL g VS(-1) from control), respectively. Thermophilic conditions showed lower performance than mesophilic conditions. Addition of AWS increased methane production by 150 and 69.6 % from PM (323.4 vs. 129 mL g VS(-1) from control) and TPM (297.6 vs. 175.5 mL g VS(-1) from control), respectively. In all experiments, 100 % acetate produced was degraded to methane. Maximum ammonia accumulation was lowered to 43.7 % by mixing of AWS (range 5.35-8.55 vs. 7.81-12.28 g N kg(-1) bed). The pH was held at 7.3-8.8, a range suitable for methanogenesis.

  10. Effect of coal fly ash-amended organic compost as a manure for agricultural crops

    SciTech Connect

    Ghuman, G.S.; Menon, M.P.; James, J.; Chandra, K.; Sajwan, K. )

    1991-04-01

    Coal-fired electric power plants generate large quantities of fly ash as a byproduct. In continuation of previous studies on the utilization of fly ash as an amendment to organic compost for use as a manure for agricultural crops, the authors have now determined the effects of this manure on the yield and uptake of selected elements by several plants including collard green, corn, mustard green, bell pepper, egg plant, and climbing beans. An amended compost containing 30-40% fly ash with a compost:soil ratio of 1:3 was found to be most effective to enhance the yield and nutrient uptake of most of the plants. At 20% fly ash level, no increase in yield of any of the above crops was observed. The uptake of K, Mg, Mn, and P was increased in most plants. Boron which is known to be detrimental to the growth of plants above certain level was also found to be increased in plants nourished with the manure.

  11. Soil microbial response to tetracycline in two different soils amended with cow manure.

    PubMed

    Chessa, Luigi; Pusino, Alba; Garau, Giovanni; Mangia, Nicoletta Pasqualina; Pinna, Maria Vittoria

    2016-03-01

    High amounts of antibiotics are introduced in the soil environment by manure amendment, which is the most important spreading route in soil, with a potential ecotoxicological impact on the environment. The objectives of this study were (a) to assess the tetracycline (Tc) bioavailability in a clay and in a sandy soil, and (b) to evaluate the effects of the Tc and cow manure on the structure and function of soil microbial communities. Clay and sandy soils were spiked with Tc at the concentrations of 100 and 500 mg Tc kg(-1) soil, and were amended or not with cow manure. The clay soil showed greater Tc sorption capacity and bioavailable Tc was between 0.157 and 4.602 mg kg(-1) soil. Tc dose and time-dependent effects on soil microbial communities were investigated by fluorescein diacetate activity, phospholipid fatty acids analysis, as well as by Biolog community level physiological profile and microbial counts at 2, 7 and 60 days after Tc and/or manure addition. The added Tc caused detrimental effect on the microbial activity and structure, particularly in the short term at the highest concentrations. However, the Tc effect was transient' it decreased after 7 days and totally disappeared within 60 days. Cow manure shifted the bacterial structure in both soils, increased the microbial activity in clay soil and contributed to recover the microbial structure in Tc-spiked manure treatments.

  12. Occurrence and distribution of sulfonamides, tetracyclines, quinolones, macrolides, and nitrofurans in livestock manure and amended soils of Northern China.

    PubMed

    Hou, Jie; Wan, Weining; Mao, Daqing; Wang, Chong; Mu, Quanhua; Qin, Songyan; Luo, Yi

    2015-03-01

    A feasible and rapid analysis for the simultaneous determination of sulfonamides (SAs), tetracyclines (TCs), fluoroquinolones (FQs), macrolides (MACs) and nitrofurans (NFs) in livestock manure and soils was established by solid-phase extraction (SPE)-ultra-performance liquid chromatography (UPLC)-tandem mass spectrometry (MS/MS). A total of 32 manure and 17 amended soil samples from the Liaoning and Tianjin areas in Northern China were collected for analysis. The largest detected frequencies and concentrations in manure samples were those of TCs (3326.6 ± 12,302.6 μg/kg), followed by FQs (411.3 ± 1453.4 μg/kg), SAs (170.6 ± 1060.2 μg/kg), NFs (85.1 ± 158.1 μg/kg), and MACs (1.4 ± 4.8 μg/kg). In general, veterinary antibiotics (VAs) were detected with higher concentrations in swine and chicken manure than in cattle manure, reflecting the heavy usage of VAs in swine and chicken husbandry in the studied area. Furthermore, higher residues of antibiotics were found in piglet and fattening swine manure than in sow manure. In addition, TCs were the most frequently (100%) detected antibiotics in amended soil with higher concentrations (up to 10,967.1 μg/kg) than any other VAs. The attenuation of SAs was more obvious than TCs in amended soil after fertilization, which can most likely be attributed to the stronger sorption of TCs than SAs to soil organic matter through cation exchange. This study illustrated the prevalence of TCs detected in both animal manure and fertilized agricultural soils in Northern China, which may increase the risk to human health through the food chain. Thus, TCs should be given more attention in the management of veterinary usage in livestock husbandry.

  13. Seasonal and soil-type dependent emissions of nitrous oxide from irrigated desert soils amended with digested poultry manures.

    PubMed

    Posmanik, Roy; Nejidat, Ali; Dahan, Ofer; Gross, Amit

    2017-03-22

    Expansion of dryland agriculture requires intensive supplement of organic fertilizers to improve the fertility of nutrient-poor desert soils. The environmental impact of organic supplements in hot desert climates is not well understood. We report on seasonal emissions of nitrous oxide (N2O) from sand and loess soils, amended with limed and non-limed anaerobic digestate of poultry manure in the Israeli Negev desert. All amended soils had substantially higher N2O emissions, particularly during winter applications, compared to unammended soils. Winter emissions from amended loess (10-175mgN2Om(-2)day(-1)) were markedly higher than winter emissions from amended sand (2-7mgN2Om(-2)day(-1)). Enumeration of marker genes for nitrification and denitrification suggested that both have contributed to N2O emissions according to prevailing environmental conditions. Lime treatment of digested manure inhibited N2O emissions regardless of season or soil type, thus reducing the environmental impact of amending desert soils with manure digestate.

  14. Manure effects on soil N in eroded and non-eroded, sprinkler-irrigated soil

    USDA-ARS?s Scientific Manuscript database

    Manure effects on nitrate-N transport through irrigated, low-organic matter calcareous soil are not well known. This field study quantified the effects of a one-time fall application of stockpiled dairy manure and urea on in-season and over-winter nitrate-N transport through non-eroded and eroded (...

  15. Decay Of Bacterial Pathogens, Fecal Indicators, And Real-Time Quantitative PCR Genetic Markers In Manure-Amended Soils

    EPA Science Inventory

    This study examined persistence and decay of bacterial pathogens, fecal indicator bacteria (FIB), and emerging real-time quantitative PCR (qPCR) genetic markers for rapid detection of fecal pollution in manure-amended agricultural soils. Known concentrations of transformed green...

  16. Decay Of Bacterial Pathogens, Fecal Indicators, And Real-Time Quantitative PCR Genetic Markers In Manure-Amended Soils

    EPA Science Inventory

    This study examined persistence and decay of bacterial pathogens, fecal indicator bacteria (FIB), and emerging real-time quantitative PCR (qPCR) genetic markers for rapid detection of fecal pollution in manure-amended agricultural soils. Known concentrations of transformed green...

  17. Manure Refinement Affects Apple Rhizosphere Bacterial Community Structure: A Study in Sandy Soil

    PubMed Central

    Zhang, Qiang; Sun, Jian; Liu, Songzhong; Wei, Qinping

    2013-01-01

    We used DNA-based pyrosequencing to characterize the bacterial community structure of the sandy soil of an apple orchard with different manure ratios. Five manure percentages (5%, 10%, 15%, 20% and 25%) were examined. More than 10,000 valid reads were obtained for each replicate. The communities were composed of five dominant groups (Proteobacteria, Actinobacteria, Chloroflexi, Acidobacteria and Bacteroidetes), of which Proteobacteria content gradually decreased from 41.38% to 37.29% as manure ratio increased from 0% to 25%, respectively. Redundancy analysis showed that 37 classes were highly correlated with manure ratio, 18 of which were positively correlated. Clustering revealed that the rhizosphere samples were grouped into three components: low manure (control, 5%) treatment, medium manure (10%, 15%) treatment and high manure (20%, 25%) treatment. Venn analysis of species types of these three groups revealed that the bacteria community difference was primarily reflected by quantity ratio rather than species variety. Although greater manure content led to higher soil organic matter content, the medium manure improved soil showed the highest urease activity and saccharase activity, while 5% to 20% manure ratio improvement also resulted in higher bacteria diversity than control and 25% manure ratio treatment. Our experimental results suggest that the use of a proper manure ratio results in significantly higher soil enzyme activity and different bacteria community patterns, whereas the use of excessive manure amounts has negative effect on soil quality. PMID:24155909

  18. Effects of organic dairy manure on soil phosphatase activity, available soil phosphorus, and growth of sorghum-sudangrass

    USDA-ARS?s Scientific Manuscript database

    Organic dairy (OD) production is increasing in the Northeastern U.S. due to consumer demand. Some physico-chemical properties of OD manure differ from conventional dairy (CD) manure, which could influence nutrient cycling and soil fertility differently when OD manure is applied to soil. Effects of O...

  19. Transfer of antibiotics from wastewater or animal manure to soil and edible crops.

    PubMed

    Pan, Min; Chu, L M

    2017-08-31

    Antibiotics are added to agricultural fields worldwide through wastewater irrigation or manure application, resulting in antibiotic contamination and elevated environmental risks to terrestrial environments and humans. Most studies focused on antibiotic detection in different matrices or were conducted in a hydroponic environment. Little is known about the transfer of antibiotics from antibiotic-contaminated irrigation wastewater and animal manure to agricultural soil and edible crops. In this study, we evaluated the transfer of five different antibiotics (tetracycline, sulfamethazine, norfloxacin, erythromycin, and chloramphenicol) to different crops under two levels of antibiotic-contaminated wastewater irrigation and animal manure fertilization. The final distribution of tetracycline (TC), norfloxacin (NOR) and chloramphenicol (CAP) in the crop tissues under these four treatments were as follows: fruit > leaf/shoot > root, while an opposite order was found for sulfamethazine (SMZ) and erythromycin (ERY): root > leaf/shoot > fruit. The growth of crops could accelerate the dissipation of antibiotics by absorption from contaminated soil. A higher accumulation of antibiotics was observed in crop tissues under the wastewater treatment than under manure treatment, which was due to the continual irrigation that increased adsorption in soil and uptake by crops. The translocation of antibiotics in crops mainly depended on their physicochemical properties (e.g. log Kow), crop species, and the concentrations of antibiotics applied to the soil. The levels of antibiotics ingested through the consumption of edible crops under the different treatments were much lower than the acceptable daily intake (ADI) levels. Copyright © 2017 Elsevier Ltd. All rights reserved.

  20. Sequestration of manure-applied sulfadiazine residues in soils.

    PubMed

    Förster, M; Laabs, V; Lamshöft, M; Groeneweg, J; Zühlke, S; Spiteller, M; Krauss, M; Kaupenjohann, M; Amelung, W

    2009-03-15

    It is not the total but the (bio)accessible concentration of veterinary medicines that determines their toxicity in the environment. We elucidate the changes in (bio)accessibility of manure-applied sulfadiazine (SDZ) with increasing contact time in soil. Fattening pigs were medicated with 14C-labeled SDZ, and the contaminated manure (fresh and aged) was amended to 2 soil types (Cambisol, Luvisol) and incubated for 218 days at 10 degrees C in the dark. Antibiotic residues of different bioaccessibility were approached by sequential extractions with 0.01 M CaCl2 (CaCl2 fraction), methanol (MeOH fraction), and finally acetonitrile/water (residual fraction, microwave extraction at 150 degrees C). In each fraction, total radioactivity, SDZ, and its major metabolites were quantified. The results showed that both SDZ and,to a lesser extent 4-hydroxysulfadiazine (4-OH-SDZ) were rapidly reformed from N-acetylsulfadiazine (N-ac-SDZ) during the first 2-4 weeks after fresh manure application, i.e., the N-acetylated metabolite does not sequester in soil to a significant extent Yet, the water and methanol extractable SDZ and 4-OH-SDZ also dissipated rapidly (DT50 = 6.0-32 days) for the fresh manure treatment with similar rate constants for both soil types. In the residual fractions, however, the concentrations of both compounds increased with time. We conclude that the residual fraction comprises the sequestered pool of SDZ and its hydroxylated metabolite. There they are entrapped and may persist in soil for several years. Including the residual fraction into fate studies thus yields dissipation half-lives of SDZ which exceed those previously reported for sulfonamides by a factor of about 100.

  1. Occurrence and diversity of tetracycline resistance genes in the agricultural soils of South Korea.

    PubMed

    Kim, Song Yeob; Kuppusamy, Saranya; Kim, Jang Hwan; Yoon, Young-Eun; Kim, Kwon-Rae; Lee, Yong Bok

    2016-11-01

    Reports on the occurrence and diversity of antibiotic-resistant bacteria and genes, which are considered to be emerging pollutants worldwide, have, to date, not been published on South Korean agricultural soils. This is the first study to investigate the persistence of tetracycline (oxytetracycline, tetracycline, and chlortetracycline)-resistant bacterial community and genes in natural and long-term fertilized (NPK, pig, and cattle manure composts) agricultural soils in South Korea. The results showed that oxytetracycline and chlortetracycline could be the dominant residues in animal manures; regular fertilization of manures, particularly pig manures, may be the prime cause for the spread and abundance of tetracycline resistance in South Korean agricultural soils. Both the country's natural and agricultural soils are reservoirs of antibiotic-resistant species. Of the 113 tetracycline-resistant isolates identified (19 typical bacterial genera and 36 distinct species), approximately 40 to 99 % belonged to Gram-positive bacteria and Bacillus constituted the predominant genera. Of the 24 tet genes targeted, tetG, tetH, tetK, tetY, tetO, tetS, tetW, and tetQ were detected in all soil samples, highlighting their predominance and robust adaptability in soils. Meanwhile, it is suggested that tetC, tetE, tetZ, tetM, tetT, and tetP(B) are the common residues in pig manures, and furthermore, the treatment of soils with pig manures may wield a different impact on the tet gene resistome in agricultural soils. This study thus highlights the necessity for regulating the usage of tetracyclines in South Korean animal farming. This must be followed by proper monitoring of the subsequent usage of animal manures especially that derived from pig farms located in agricultural soils.

  2. Soil Erosion and Agricultural Sustainability

    NASA Astrophysics Data System (ADS)

    Montgomery, D. R.

    2009-04-01

    Data drawn from a global compilation of studies support the long articulated contention that erosion rates from conventionally plowed agricultural fields greatly exceed rates of soil production, erosion under native vegetation, and long-term geological erosion. Whereas data compiled from around the world show that soil erosion under conventional agriculture exceeds both rates of soil production and geological erosion rates by up to several orders of magnitude, similar global distributions of soil production and geological erosion rates suggest an approximate balance. Net soil erosion rates in conventionally plowed fields on the order of 1 mm/yr can erode typical hillslope soil profiles over centuries to millennia, time-scales comparable to the longevity of major civilizations. Well-documented episodes of soil loss associated with agricultural activities date back to the introduction of erosive agricultural methods in regions around the world, and stratigraphic records of accelerated anthropogenic soil erosion have been recovered from lake, fluvial, and colluvial stratigraphy, as well as truncation of soil stratigraphy (such as truncated A horizons). A broad convergence in the results from studies based on various approaches employed to study ancient soil loss and rates of downstream sedimentation implies that widespread soil loss has accompanied human agricultural intensification in examples drawn from around the world. While a broad range of factors, including climate variability and society-specific social and economic contexts — such as wars or colonial relationships — all naturally influence the longevity of human societies, the ongoing loss of topsoil inferred from studies of soil erosion rates in conventional agricultural systems has obvious long-term implications for agricultural sustainability. Consequently, modern agriculture — and therefore global society — faces a fundamental question over the upcoming centuries. Can an agricultural system

  3. Fly ash-amended compost as a manure for agricultural crops

    SciTech Connect

    Menon, M.P.; Sajwan, K.S.; Ghuman, G.S.; James, J.; Chandra, K. )

    1993-11-01

    Homemade organic compost prepared from lawn grass clippings was amended with fine fly ash collected from a coal-fired power plant (SRS 484.D. Savannah River Site, Aiken, SC) to investigate its usefulness as a manure in enhancing nutrient uptake and increasing dry matter yield in selected agricultural crops. Three treatments were compared: five crops (mustard, collard, string beans, bell pepper, and eggplant) were each grown on three kinds of soil: soil alone, soil amended with composted grass clippings, and soil amended with the mixed compost of grass clippings and 20% fly ash. The fly ash-amended compost was found to be effective in enhancing the dry matter yield of collard greens and mustard greens by 378% and 348%, respectively, but string beans, bell pepper, and eggplant did not show any significant increase in dry matter yield. Analysis of the above-ground biomass of these last three plants showed they assimilated high levels of boron, which is phytotoxic; and this may be the reason for their poor growth. Soils treated with fly ash-amended compost often gave higher concentrations than the control for K, Ca, Mg, S, Zn, and B in the Brassica crops. 18 refs., 2 figs., 5 tabs.

  4. Soil moisture: Some fundamentals. [agriculture - soil mechanics

    NASA Technical Reports Server (NTRS)

    Milstead, B. W.

    1975-01-01

    A brief tutorial on soil moisture, as it applies to agriculture, is presented. Information was taken from books and papers considered freshman college level material, and is an attempt to briefly present the basic concept of soil moisture and a minimal understanding of how water interacts with soil.

  5. Fate of antimicrobial resistance genes in response to application of poultry and swine manure in simulated manure-soil microcosms and manure-pond microcosms.

    PubMed

    Wang, Mianzhi; Sun, Yongxue; Liu, Peng; Sun, Jing; Zhou, Qin; Xiong, Wenguang; Zeng, Zhenling

    2017-07-18

    This study aimed to determine the occurrence, abundance, and fate of nine important antimicrobial resistance genes (ARGs) (sul1, sul2, tetB, tetM, ermB, ermF, fexA, cfr, and Intl1) in the simulated soil and pond microcosms following poultry and swine manure application. Absolute quantitative PCR method was used to determine the gene copies. The results were modeled as a logarithmic regression (N = mlnt + b) to explore the fate of target genes. Genes sul1, Intl1, sul2, and tetM had the highest abundance following the application of the two manure types. The logarithmic regression model fitted the results well (R (2) values up to 0.99). The reduction rate of all genes (except for the genes fexA and cfr) in manure-pond microcosms was faster than those in manure-soil microcosms. Importantly, sul1, intl1, sul2, and tetM had the lowest reduction rates in all the samples and the low reduction rates of tetM was the first time to be reported. These results indicated that ARG management should focus on using technologies for the ARG elimination before the manure applications rather than waiting for subsequent attenuation in soil or water, particularly the ARGs (such as sul1, intl1, sul2, and tetM investigated in this study) that had high abundance and low reduction rate in the soil and water after application of manure.

  6. Changes in soil nutrients after 10 years of cattle manure and swine effluent application

    USDA-ARS?s Scientific Manuscript database

    Application of cattle manure and swine effluent to cropland builds nutrient pools, affects soil quality, and increases crop productivity. The objective of the present study was to evaluate the rate of change in soil nutrient concentration and soil chemical properties due to cattle manure and swine e...

  7. Pollution characteristics of 23 veterinary antibiotics in livestock manure and manure-amended soils in Jiangsu province, China.

    PubMed

    Guo, Xin Y; Hao, Li J; Qiu, Pan Z; Chen, Rong; Xu, Jing; Kong, Xiang J; Shan, Zheng J; Wang, Na

    2016-01-01

    The aim of this study was to investigate the pollution characteristics of typical veterinary antibiotics in manure and soil of livestock farms in Jiangsu province. This investigation employed solid-phase extraction (SPE) coupled with ultra-performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS). A total of 53 manure and 50 amended soil samples from 16 livestock farms in Jiangsu province were collected for analysis. In the manure samples, the highest detected frequencies and concentrations were those of tetracyclines (TCs, 54.1 ± 5775.6 μgkg(-1)), followed by fluoroquinolones (FQs, 8.4 ± 435.6 μgkg(-1)), sulphonamides (SAs, 3.2 ± 5.2 μgkg(-1)) and macrolides (MACs, 0.4 ± 110.5 μgkg(-1)). Statistical analysis was used to illuminate the pollution characteristics of 23 veterinary antibiotics for various animal types and different regions in Jiangsu province. The results showed that the pollution level in cow manure was relatively lower compared with pig and chicken manure due to the relative restriction of medication. Furthermore, contamination was serious in amended soil from chicken farms. The pollution level in manure among different regions was higher to the south and north compared with the centre of the region. The same outcome was found for soil. Antibiotic residues in organic fertilizer were also investigated in this study. We found that although the detected concentration was lower in organic fertilizer than in fresh manure, detection frequencies (10-90%) were high, especially for roxithromycin (90%) in MACs (30-90%). This finding suggests attention should be paid to the pollution levels in organic fertilizer. This study is the first extensive investigation of the occurrence and distribution of many kinds of typical veterinary antibiotics in manure and soil from livestock farms of Jiangsu province. This investigation systematically assesses veterinary antibiotics usage and related emissions in southeast China.

  8. Sulphur mineralization kinetics of cattle manure and green waste compost in soils.

    PubMed

    Saviozzi, Alessandro; Cardelli, Roberto; Cipolli, Silvia; Levi-Minzi, Renato; Riffaldi, Riccardo

    2006-12-01

    Sulphur mineralization of cattle manure (CM) and green waste compost (GWC) added to six agricultural soils with different chemical properties was monitored over 10 weeks in a laboratory incubation experiment. Although the amount of sulphur was higher in CM than in GWC, the cumulative SO4(2-)-S values in GWC-treated soils were higher than in soil amended with CM. The percentages of mineralized S were always higher in GWC-treated soil (in the range 1.3-8.5%) than in CM-treated soil (in the range 0.9-3.8%). In three of the six soils, particularly for CM, an immobilization of sulphur was observed. Three kinetic models were evaluated for their suitability to describe the mineralization process. The first-order model best described S mineralization for both amended and control soils. The GWC substantially increased the amount of potentially mineralizable S (S0) relative to the controls. In GWC-treated soils, the rates of S mineralization (k) were higher than rates in the controls. The k of CM-amended soils was often lower than the k of control soils. Parameters derived from the model were tested as indices for assessing the relationships between S mineralization and soil characteristics. The S0 was positively correlated to the amount of cumulative SO4(2-)-S and also to the content of organic C, N and S in soil.

  9. ( sup 14 C)-. gamma. -hexachlorocyclohexane in a flooded soil with green manuring

    SciTech Connect

    Drego, J.; Murthy, N.B.K.; Raghu, K. )

    1990-01-01

    The fate of ({sup 14}C)-{gamma}-hexachlorocyclohexane ({gamma}-HCH) was studied in green manure amended and unamended flooded soils with a continuous-flow system permitting {sup 14}C mass balance. There was a greater loss of radioactivity in the form of organic volatiles and {sup 14}CO{sub 2} in green manure amended than unamended soil. The organic volatile compound formed was identified as benzene. Green manure amendment considerably decreased the levels of extractable residues from soil. Bound residue formation was also less in green manure amended than unamended soil.

  10. Soil erosion and agricultural sustainability

    PubMed Central

    Montgomery, David R.

    2007-01-01

    Data drawn from a global compilation of studies quantitatively confirm the long-articulated contention that erosion rates from conventionally plowed agricultural fields average 1–2 orders of magnitude greater than rates of soil production, erosion under native vegetation, and long-term geological erosion. The general equivalence of the latter indicates that, considered globally, hillslope soil production and erosion evolve to balance geologic and climate forcing, whereas conventional plow-based agriculture increases erosion rates enough to prove unsustainable. In contrast to how net soil erosion rates in conventionally plowed fields (≈1 mm/yr) can erode through a typical hillslope soil profile over time scales comparable to the longevity of major civilizations, no-till agriculture produces erosion rates much closer to soil production rates and therefore could provide a foundation for sustainable agriculture. PMID:17686990

  11. Antibiotic uptake by vegetable crops from manure-applied soils.

    PubMed

    Kang, Dong Hee; Gupta, Satish; Rosen, Carl; Fritz, Vincent; Singh, Ashok; Chander, Yogesh; Murray, Helene; Rohwer, Charlie

    2013-10-23

    This study quantified the uptake of five antibiotics (chlortetracycline, monensin, sulfamethazine, tylosin, and virginiamycin) by 11 vegetable crops in two different soils that were fertilized with raw versus composted turkey and hog manures or inorganic fertilizer. Almost all vegetables showed some uptake of antibiotics from manure treatments. However, statistical testing showed that except for a few isolated treatments the concentrations of all antibiotics in vegetable tissues were generally less than the limits of quantification. Further testing of the significant treatments showed that antibiotic concentrations in vegetables from many of these treatments were not significantly different than the corresponding concentrations from the fertilizer treatment (matrix effect). All five antibiotic concentrations in the studied vegetables were <10 μg kg(-1). On the basis of the standards for maximum residue levels in animal tissues and suggested maximum daily intake based on body weight, this concentration would not pose any health risk unless one is allergic to that particular antibiotic.

  12. Process dominance analysis for fate modeling of flubendazole and fenbendazole in liquid manure and manured soil.

    PubMed

    Moenickes, Sylvia; Höltge, Sibylla; Kreuzig, Robert; Richter, Otto

    2011-12-01

    Fate monitoring data on anaerobic transformation of the benzimidazole anthelmintics flubendazole (FLU) and fenbendazole (FEN) in liquid pig manure and aerobic transformation and sorption in soil and manured soil under laboratory conditions were used for corresponding fate modeling. Processes considered were reversible and irreversible sequestration, mineralization, and metabolization, from which a set of up to 50 different models, both nested and concurrent, was assembled. Five selection criteria served for model selection after parameter fitting: the coefficient of determination, modeling efficiency, a likelihood ratio test, an information criterion, and a determinability measure. From the set of models selected, processes were classified as essential or sufficient. This strategy to identify process dominance was corroborated through application to data from analogous experiments for sulfadiazine and a comparison with established fate models for this substance. For both, FLU and FEN, model selection performance was fine, including indication of weak data support where observed. For FLU reversible and irreversible sequestration in a nonextractable fraction was determined. In particular, both the extractable and the nonextractable fraction were equally sufficient sources for irreversible sequestration. For FEN generally reversible formation of the extractable sulfoxide metabolite and reversible sequestration of both the parent and the metabolite were dominant. Similar to FLU, irreversible sequestration in the nonextractable fraction was determined for which both the extractable or the nonextractable fraction were equally sufficient sources. Formation of the sulfone metabolite was determined as irreversible, originating from the first metabolite.

  13. Impact of recent manure applications on natural estrogen concentrations in streams near agricultural fields.

    PubMed

    Lafrance, Pierre; Caron, Emmanuelle

    2013-10-01

    Few studies on natural estrogens have been conducted in agricultural ecosystems. High (up to 58 ng/L) estrone concentrations were measured shortly after applications of manure in a small agricultural watershed. No other estrogens (17ß-estradiol, estrone or estriol) were detected afterward (first three rainfalls after applications). Results suggest that aquatic organisms in agricultural watersheds could be exposed to estrone shortly after manure applications, probably from leaching of land-applied animal wastes, but that this exposure would be short-lived. Crown Copyright © 2013. Published by Elsevier Inc. All rights reserved.

  14. Green manure plants for remediation of soils polluted by metals and metalloids: ecotoxicity and human bioavailability assessment.

    PubMed

    Foucault, Y; Lévêque, T; Xiong, T; Schreck, E; Austruy, A; Shahid, M; Dumat, C

    2013-10-01

    Borage, white mustard and phacelia, green manure plants currently used in agriculture to improve soil properties were cultivated for 10 wk on various polluted soils with metal(loid) concentrations representative of urban brownfields or polluted kitchen gardens. Metal(loid) bioavailability and ecotoxicity were measured in relation to soil characteristics before and after treatment. All the plants efficiently grow on the various polluted soils. But borage and mustard only are able to modify the soil characteristics and metal(loid) impact: soil respiration increased while ecotoxicity, bioaccessible lead and total metal(loid) quantities in soils can be decreased respectively by phytostabilization and phytoextraction mechanisms. These two plants could therefore be used for urban polluted soil refunctionalization. However, plant efficiency to improve soil quality strongly depends on soil characteristics. Copyright © 2013. Published by Elsevier Ltd.

  15. Tillage and manure application effects on mineral nitrogen leaching from seasonally frozen soils.

    PubMed

    Gupta, Satish; Munyankusi, Emmanuel; Moncrief, John; Zvomuya, Francis; Hanewall, Matt

    2004-01-01

    Land application of manure is a common practice in the Upper Midwest of the United States. Recently, there have been concerns regarding the effect of this practice on water quality, especially when manure is applied during winter over frozen soils. A study undertaken on a Rozetta silt loam (fine-silty, mixed, superactive, mesic Typic Hapludalfs) at Lancaster, WI, evaluated the effects of tillage and timing of manure application on surface and subsurface water quality. The daily scrape and haul liquid dairy manure was applied either in the fall (before snow) or in winter (over snow with frozen soil underneath) to be compared with no manure under two tillage systems (no-till and chisel-plowing). In this paper, we report results on the effects of the above treatments on mineral N leaching. Percolation and mineral N leaching during the nongrowing season were, respectively, 72 and 78% of the annual losses, mainly because of the absence of plant water and N uptake. Percolation was generally higher from no-till compared with chisel-plow but there was no significant effect of tillage on mineral N concentration of the leachate or mineral N losses via leaching. Mineral N leaching was statistically higher from the manure-applied vs. no-manure treatment, but there was no difference between winter-applied manure and no-manure treatments. There were significant tillage by manure interactions with fall manure application followed by chisel-plowing resulting in highest N leaching losses. Averaged over the two years, N leaching rates were 52, 38, and 28 kg N ha(-1) yr(-1) from fall-applied, winter-applied, and no-manure treatments, respectively. These results show that there is substantial N leaching from these soils even when no fertilizer or manure is applied. Furthermore, fall-applied manure followed by fall tillage significantly increases N leaching due to enhanced mineralization of both soil and manure organic N.

  16. Fate and transport of tylosin-resistant bacteria and macrolide resistance genes in artificially drained agricultural fields receiving swine manure

    USDA-ARS?s Scientific Manuscript database

    Application of manure from swine treated with antibiotics introduces antibiotics and antibiotic resistance genes to soil with the potential for further movement in drainage water. Manure concentrations for ermB, ermC and ermF were all >109 copy g-1. Manure contained 1.76 x 105 CFUg-1 enterococci w...

  17. Manure fertilization alters the population of ammonia-oxidizing bacteria rather than ammonia-oxidizing archaea in a paddy soil.

    PubMed

    Wang, Yu; Zhu, Guibing; Song, Liyan; Wang, Shanyun; Yin, Chengqing

    2014-03-01

    Manure fertilizers are widely used in agriculture and highly impacted the soil microbial communities such as ammonia oxidizers. However, the knowledge on the communities of archaeal versus bacterial ammonia oxidizers in paddy soil affected by manure fertilization remains largely unknown, especially for a long-term influence. In present work, the impact of manure fertilization on the population of ammonia oxidizers, related potential nitrification rates (PNRs) and the key factors manipulating the impact were investigated through studying two composite soil cores (long-term fed with manure fertilization versus undisturbed). Moreover, soil incubated with NH(4)(+) for 5 weeks was designed to verify the field research. The results showed that the copy numbers of bacterial amoA gene in the manure fed soil were significant higher than those in the unfed soil (p < 0.05), suggesting a clear stimulating effect of long-term manure fertilization on the population of ammonia-oxidizing bacteria (AOB). The detected PNRs in the manure fed soil core (14-218 nmol L(-1)  N g(-1)  h(-1)) were significant higher than those in the unfed soil core (5-72 nmol L(-1)  N g(-1)  h(-1) ; p < 0.05). Highly correlations between the PNRs and the bacterial amoA gene copies rather than archaeal amoA gene were observed, indicating strong nitrification capacity related to bacterial ammonia oxidizers. The NH(4)(+) -N significantly correlated to the abundance of AOB (p < 0.01) and explained 96.1% of the environmental variation, showing the NH(4)(+) -N was the main factor impacting the population of AOB. The incubation experiment demonstrated a clear increase of the bacterial amoA gene abundance (2.0 × 10(6) to 8.4 × 10(6)  g(-1) d.w.s. and 1.6 × 10(4) to 4.8 × 10(5)  g(-1) d.w.s.) in both soil but not for the archaeal amoA gene, in agreement with the field observation. Overall, our results suggested that manure fertilization promoted the

  18. Tracing copper derived from pig manure in calcareous soils and soil leachates by 65Cu labeling.

    PubMed

    Ostermann, Anne; He, Yao; Siemens, Jan; Welp, Gerhard; Heuser, Alexander; Wombacher, Frank; Münker, Carsten; Xue, Qiaoyun; Lin, Xianyong; Amelung, Wulf

    2015-04-07

    Copper is used as a growth promoter in animal husbandry, resulting in high Cu concentrations in animal manure. We tested whether Cu would be mobilized in soils receiving excessive loads of manure, both from recently added and from aged fractions. To discriminate between these Cu sources, manure was labeled with (65)Cu. After soil application of 0, 15, and 30 Mg manure ha(-1), leachate was collected in free-draining lysimeters (40 cm depth) under undisturbed soil over a 53 day period. Determining the total amounts of Cu and the fractions of (65)Cu in leachate and the soil profile enabled us to trace the translocation of Cu derived from labeled manure. More than 84% of the applied Cu was retained in the top 2 cm of soil. Less than 0.01% of the applied Cu was detected overall in the leachate. Of this amount, however, 38% (± 8.9 SE) was leached within 8 days after application. The total Cu concentration in leachates (32-164 μg L(-1)) frequently exceeded the Chinese groundwater quality standard of 50 μg L(-1). The added (65)Cu, however, accounted for less than 3.6% of the total Cu leaching load, suggesting that Cu from older sources and/or geological background controls contamination, regardless of current land management.

  19. Characterization of leached phosphorus from soil, manure, and manure-amended soil by physical and chemical fractionation and Diffusive Gradients in Thin films (DGT).

    PubMed

    Glæsner, Nadia; Donner, Erica; Magid, Jakob; Rubæk, Gitte H; Zhang, Hao; Lombi, Enzo

    2012-10-02

    We are challenged to date to fully understand mechanisms controlling phosphorus (P) mobilization in soil. In this study we evaluated physical properties, chemical reactivity, and potential bioavailability of P mobilized in soil during a leaching event and examined how the amounts and properties of leached P were influenced by surface application of cattle manure. Leaching experiments on manure itself, and on intact soil columns (14.1 cm inner dia., 25 cm height) before and after manure application, were carried out at an irrigation rate of 1 mm h(-1) for 48 h. High concentrations of dissolved reactive P (DRP) were found in manure leachates (up to 32 mg L(-1)), whereas concentrations of P in soil leachates were low both before and after manure application (around 0.04 mg L(-1) before application and up to 0.4 mg L(-1) afterward). This result indicates that the soil retained most of the P added with manure. Manure particles themselves were also largely retained by the soil. Combined physical (centrifugation) and chemical (molybdate reactiveness) fractionation of leached P showed that leachates in the manure treated soils were dominated by dissolved unreactive P (DUP), mainly originating from manure. However, centrifugation only removed a small fraction of total particles from the leachates, indicating that the so-called dissolved fraction may be associated with low density particulate matter. Deployment of Diffusive Gradients in Thin films (DGT) devices in the leachates proved to be a good approach for measuring reactive P in soil leachates. The results indicated that total reactive P (TRP) gave a better estimate of potentially bioavailable P than both total P (TP) and DRP in these experiments.

  20. Different impacts of manure and chemical fertilizers on bacterial community structure and antibiotic resistance genes in arable soils.

    PubMed

    Liu, Peng; Jia, Shuyu; He, Xiwei; Zhang, Xuxiang; Ye, Lin

    2017-09-04

    Both manure and chemical fertilizers are widely used in modern agriculture. However, the impacts of different fertilizers on bacterial community structure and antibiotic resistance genes (ARGs) in arable soils still remain unclear. In this study, high-throughput sequencing and quantitative PCR were employed to investigate the bacterial community structure, ARGs and mobile genetic elements (MGEs) influenced by the application of different fertilizers, including chemical fertilizers, piggery manure and straw ash. The results showed that the application of fertilizers could significantly change the soil bacterial community and the abundance of Gaiella under phylum Actinobacteria was significantly reduced from 12.9% in unfertilized soil to 4.1%-7.4% in fertilized soil (P < 0.05). It was also found that the application of manure could cause a transient effect on soil resistome composition and the relative abundance of ARGs increased from 7.37 ppm to 32.10 ppm. The abundance of aminoglycoside, sulfonamide and tetracycline resistance genes greatly increased after manure fertilization and then gradually returned to normal levels with the decay of some intestinal bacteria carrying ARGs. In contrast, the application of chemical fertilizers and straw ash significantly changed the bacterial community structure but exerted little effect on soil resistome. Overall, the results of this study illustrated the different effects of different fertilizers on the soil resistome and revealed that the changes of soil resistome induced by manure application mainly resulted from alteration of bacteria community rather than the horizontal gene transfer. Copyright © 2017 Elsevier Ltd. All rights reserved.

  1. Transport and persistence of tylosin-resistant enterococci, genes, and tylosin in soil and drainage water from fields receiving Swine manure.

    PubMed

    Garder, Jason L; Moorman, Thomas B; Soupir, Michelle L

    2014-07-01

    Land application of manure from tylosin-treated swine introduces tylosin, tylosin-resistant enterococci, and erythromycin resistant rRNA methylase () genes, which confer resistance to tylosin. This study documents the persistence and transport of tylosin-resistant enterococci, genes, and tylosin in tile-drained chisel plow and no-till agricultural fields treated with liquid swine manure in alternating years. Between 70 and 100% of the enterococci in manure were resistant to tylosin and B concentrations exceeded 10 copies g manure, while the mean F concentrations exceeded 10 copies g manure (T was not detected). The mean concentration of tylosin was 73 ng g manure. Soil collected from the manure injection band closely following application contained >10 copies g soil of both B and F in 2010 and >10 copies g soil after the 2011 application compared to 3 × 10 to 3 × 10 copies g soil in the no-manure control plots. Gene abundances declined over the subsequent 2-yr period to levels similar to those in the no-manure controls. Concentrations of enterococci in tile water were low, while tylosin-resistant enterococci were rarely detected. In approximately 75% of tile water samples, B was detected, and F was detected in 30% of tile water samples, but levels of these genes were not elevated due to manure application, and no difference was found between tillage practices. These results show that tylosin usage increased the short-term occurrence of tylosin-resistant enterococci, genes, and tylosin in soils but had minimal effect on tile drainage water quality in years of average to below average precipitation.

  2. Antibiotic resistance of microorganisms in agricultural soils in Russia

    NASA Astrophysics Data System (ADS)

    Danilova, Natasha; Galitskaya, Polina; Selivanovskaya, Svetlana

    2017-04-01

    Antibiotics are medicines widely used to treat and prevent bacterial infections not only in human medicine but also in veterinary. Besides, in animal husbandry antibiotics are often used in for stimulation of animal's growth. Many antibiotics used for veterinary purposes are weakly absorbed in the animal's gut. So up to 90% of the administered antibiotics are excreted with manure and urine. Therefore use of manure as an organic fertilizer leads to formation and spreading of antibiotic resistance among soil microbes. Another reason of such spreading is the horizontal transfer of genes encoding antibiotic resistance from manure to soil microflora. The level of antibiotic resistance genes pollution of soils has not been properly studied yet. The aim of this study was to estimate the contamination of agricultural soils by antibiotic resistant genes. 30 samples of agricultural soils were selected around of Kazan city (Tatarstan Republic) with 1.3 Mio citizens. Since tetracycline is reported to be the most wide spread veterinary antibiotic in Russia, we estimated the level of soil contamination by tet(X) gene encoding tetracycline decomposition in microbial cell. Real time PCR method with specific primers was used as a method of investigation. Particle size type distribution of 31% of soil samples was estimated to be sandy clay, and 69% of soil samples - to silty clay. Content of dissoluble organic carbon ranged from 0,02 mg g -1 (sample 20) to 0,46 mg g -1 (sample 16). Respiration activity and microbial biomass of soils were estimated to be 0,80-5,28 CO2 C mg g -1 h-1 and 263,51-935,77 µg kg - 1 respectively. The values presented are typical for soils of Tatarstan Republic. In terms of the antibiotic resistant gene content, 27 of 30 samples investigated contained tet(X) gene, while 52% of the samples were highly contaminated, 34% of samples were middle contaminated and 14% of samples - weakly contaminated.

  3. Importance of Soil Amendments: Survival of Bacterial Pathogens in Manure and Compost Used as Organic Fertilizers.

    PubMed

    Sharma, Manan; Reynnells, Russell

    2016-08-01

    Biological soil amendments (BSAs) such as manure and compost are frequently used as organic fertilizers to improve the physical and chemical properties of soils. However, BSAs have been known to be a reservoir for enteric bacterial pathogens such as enterohemorrhagic Escherichia coli (EHEC), Salmonella spp., and Listeria spp. There are numerous mechanisms by which manure may transfer pathogens to growing fruits and vegetables, and several outbreaks of infections have been linked to manure-related contamination of leafy greens. In the United States several commodity-specific guidelines and current and proposed federal rules exist to provide guidance on the application of BSAs as fertilizers to soils, some of which require an interval between the application of manure to soils and the harvest of fruits and vegetables. This review examines the survival, persistence, and regrowth/resuscitation of bacterial pathogens in manure, biosolids, and composts. Moisture, along with climate and the physicochemical properties of soil, manure, or compost, plays a significant role in the ability of pathogens to persist and resuscitate in amended soils. Adaptation of enteric bacterial pathogens to the nonhost environment of soils may also extend their persistence in manure- or compost-amended soils. The presence of antibiotic-resistance genes in soils may also be increased by manure application. Overall, BSAs applied as fertilizers to soils can support the survival and regrowth of pathogens. BSAs should be handled and applied in a manner that reduces the prevalence of pathogens in soils and the likelihood of transfer of food-borne pathogens to fruits and vegetables. This review will focus on two BSAs-raw manure and composted manure (and other feedstocks)-and predominantly on the survival of enteric bacterial pathogens in BSAs as applied to soils as organic fertilizers.

  4. Manure and inorganic N affect irrigated corn yields and soil properties

    USDA-ARS?s Scientific Manuscript database

    Manure could be a substitute for inorganic N fertilizers and for mitigating potential soil deterioration under irrigated corn (Zea mays L.) silage production, but the impact on yields, soil C and N have not been thoroughly studied in the semi-arid western U.S. Five N source treatments [dairy manure...

  5. Diet, tillage and soil moisture effects on odorous emissions following land application of beef manure

    USDA-ARS?s Scientific Manuscript database

    Beef manure from animals fed diets containing different amounts of wet distillers grain with solubles (WDGS) was applied to soil as a fertilizer to plot located across the slope. The applied manure and soil were either tilled or not tilled. The odor emissions were measured for 24 hours. Then a sing...

  6. Sulfonamide-Resistant Bacteria and Their Resistance Genes in Soils Fertilized with Manures from Jiangsu Province, Southeastern China

    PubMed Central

    Jiao, Shaojun; Zhang, Jun; Ye, Boping; Gao, Shixiang

    2014-01-01

    Antibiotic-resistant bacteria and genes are recognized as new environmental pollutants that warrant special concern. There were few reports on veterinary antibiotic-resistant bacteria and genes in China. This work systematically analyzed the prevalence and distribution of sulfonamide resistance genes in soils from the environments around poultry and livestock farms in Jiangsu Province, Southeastern China. The results showed that the animal manure application made the spread and abundance of antibiotic resistance genes (ARGs) increasingly in the soil. The frequency of sulfonamide resistance genes was sul1 > sul2 > sul3 in pig-manured soil DNA and sul2 > sul1 > sul3 in chicken-manured soil DNA. Further analysis suggested that the frequency distribution of the sul genes in the genomic DNA and plasmids of the SR isolates from manured soil was sul2 > sul1 > sul3 overall (p<0.05). The combination of sul1 and sul2 was the most frequent, and the co-existence of sul1 and sul3 was not found either in the genomic DNA or plasmids. The sample type, animal type and sampling time can influence the prevalence and distribution pattern of sulfonamide resistance genes. The present study also indicated that Bacillus, Pseudomonas and Shigella were the most prevalent sul-positive genera in the soil, suggesting a potential human health risk. The above results could be important in the evaluation of antibiotic-resistant bacteria and genes from manure as sources of agricultural soil pollution; the results also demonstrate the necessity and urgency of the regulation and supervision of veterinary antibiotics in China. PMID:25405870

  7. Aged Manures as Sources of Pathogens in Agricultural Runoff

    EPA Science Inventory

    Overland runoff from fields with applied manure may carry a variety of chemical and microbial contaminants that compromise water quality and increase the human health risk of exposure to pathogenic microorganisms. A series of rainfall simulation experiments were designed and impl...

  8. Aged Manures as Sources of Pathogens in Agricultural Runoff

    EPA Science Inventory

    Overland runoff from fields with applied manure may carry a variety of chemical and microbial contaminants that compromise water quality and increase the human health risk of exposure to pathogenic microorganisms. A series of rainfall simulation experiments were designed and impl...

  9. Divergence of compost extract and bio-organic manure effects on lucerne plant and soil.

    PubMed

    Ren, Haiyan; Hu, Jian; Hu, Yifei; Yang, Gaowen; Zhang, Yingjun

    2017-01-01

    Application of organic materials into agricultural systems enhances plant growth and yields, and improves soil fertility and structure. This study aimed to examine the effects of "compost extract (CE)", a soil conditioner, and bio-organic manure (BOM) on the growth of lucerne (Medicago sativa), and compare the efficiency between BOM (including numbers of microorganisms) and CE (including no added microorganisms). A greenhouse experiment was conducted with four soil amendment treatments (control, BOM, CE and CEBOM), and was arranged in a completely randomized design with 10 replicates for each treatment. Plant biomass, nutritive value and rhizobia efficacy as well as soil characteristics were monitored. CE rather than BOM application showed a positive effect on plant growth and soil properties when compared with the control. Lucerne nodulation responded equally to CE addition and rhizobium inoculation. CE alone and in combination with BOM significantly increased plant growth and soil microbial activities and improved soil structure. The synergistic effects of CE and BOM indicate that applying CE and BOM together could increase their efficiency, leading to higher economic returns and improved soil health. However, CE alone is more effective for legume growth since nodulation was suppressed by nitrogen input from BOM. CE had a higher efficiency than BOM for enriching soil indigenous microorganisms instead of adding microorganisms and favouring plant nodulation.

  10. Divergence of compost extract and bio-organic manure effects on lucerne plant and soil

    PubMed Central

    Hu, Jian; Hu, Yifei; Yang, Gaowen; Zhang, Yingjun

    2017-01-01

    Aim Application of organic materials into agricultural systems enhances plant growth and yields, and improves soil fertility and structure. This study aimed to examine the effects of “compost extract (CE)”, a soil conditioner, and bio-organic manure (BOM) on the growth of lucerne (Medicago sativa), and compare the efficiency between BOM (including numbers of microorganisms) and CE (including no added microorganisms). Method A greenhouse experiment was conducted with four soil amendment treatments (control, BOM, CE and CEBOM), and was arranged in a completely randomized design with 10 replicates for each treatment. Plant biomass, nutritive value and rhizobia efficacy as well as soil characteristics were monitored. Result CE rather than BOM application showed a positive effect on plant growth and soil properties when compared with the control. Lucerne nodulation responded equally to CE addition and rhizobium inoculation. CE alone and in combination with BOM significantly increased plant growth and soil microbial activities and improved soil structure. The synergistic effects of CE and BOM indicate that applying CE and BOM together could increase their efficiency, leading to higher economic returns and improved soil health. However, CE alone is more effective for legume growth since nodulation was suppressed by nitrogen input from BOM. CE had a higher efficiency than BOM for enriching soil indigenous microorganisms instead of adding microorganisms and favouring plant nodulation. PMID:28894647

  11. Influence of bovine manure on dissipation of hexazinone in soil.

    PubMed

    Wang, Huili; Li, Yanyan; Lu, Yujie; Huang, Changjiang; Zhang, Minghua; Wang, Xuedong

    2009-01-01

    The effects of bovine manure (BM) on the degradation of hexazinone and formation of three of its major metabolites were investigated in sandy loam soil. The degradation half-life of hexazinone was 29.6 days in unamended soil, while it decreased to 21.8 days in BM-amended soil. The major metabolites formed in unamended soil were [3-cyclohexyl-6-(methylamino)-1-methyl-1,3,5-triazine-2,4(1, 3H)-dione] (metabolite A) and [3-cyclohexyl-1-methyl-1,3,5-triazine-2,4,6(1, 3, 5H)-trione] (metabolite C), while metabolite B [3-(4-hydroxycyclohexyl)-6-(dimethylamino)-1-methyl-1,3,5-triazine-2,4(1, 3H)-dione] was not detected over the entire experimental period. However, in BM-amended soil, metabolite B was detected at 20 and 40 days after incubation, suggesting that BM contributed to formation of this metabolite. N-demethylation, removal of the dimethylamino group with formation of a carbonyl group at the 6-position of the triazine ring appeared to be the principal mechanisms involved in hexazinone metabolism in unamended soil. However, hydroxylation at the 4-positon of the cyclohexyl group as well as the above two modes were the principal pathways in BM-amended soil.

  12. Antibiotic resistance genes in manure-amended soil and vegetables at harvest.

    PubMed

    Wang, Feng-Hua; Qiao, Min; Chen, Zheng; Su, Jian-Qiang; Zhu, Yong-Guan

    2015-12-15

    Lettuce and endive, which can be eaten raw, were planted on the manure-amended soil in order to explore the influence of plants on the abundance of antibiotic resistance genes (ARGs) in bulk soil and rhizosphere soil, and the occurrence of ARGs on harvested vegetables. Twelve ARGs and one integrase gene (intI1) were detected in all soil samples. Five ARGs (sulI, tetG, tetC, tetA, and tetM) showed lower abundance in the soil with plants than those without. ARGs and intI1 gene were also detected on harvested vegetables grown in manure-amended soil, including endophytes and phyllosphere microorganisms. The results demonstrated that planting had an effect on the distribution of ARGs in manure-amended soil, and ARGs were detected on harvested vegetables after growing in manure-amended soil, which had potential threat to human health.

  13. Direct and residual effects of manure on soil chemical properties

    NASA Astrophysics Data System (ADS)

    Nastri, A.; Triberti, L.; Giordani, G.; Comellini, F.; Baldoni, G.

    2009-04-01

    The beneficial effects of manure recycling in cropland on soil fertility are well documented. Nowadays it can help sequestrate C in the soil organic matter, advocated to mitigate the atmospheric CO2 increase. Because of the gradual disappearance of conventional livestock farming in Western Europe, the study of the persistence of the positive effects of manuring after its interruption can be interesting. Any research on soil fertility dynamic, however, requires long-term experiments because it is quite slow and greatly influenced by weather. A field trial, started in 1966 and still in progress in the Experimental Farm of Bologna University, compares 5 crop rotations (a 9-year course: corn-wheat-corn-wheat-corn-wheat-alfalfa-alfalfa-alfalfa, corn-wheat and sugarbeet-wheat, continuous corn and continuous wheat), at 3 levels of cattle manure supply combined with 3 inorganic NP fertilizers rates in a split-split plot replicated twice. The soil is an alluvial silty loam, fertile but low in organic matter (13.3 g kg-1). Manure is spread before corn, sugarbeet and alfalfa, at a mean yearly rate of 0 (M0), 20 (M1) and 40 (M2) t ha-1 of fresh material. Since 1984 M2 has been interrupted to evaluate residual effects. Regarding mineral fertilizer rates, for this study we considered only the unfertilized control (N0P0) and N1P1 level, corresponding to a mean yearly application of 220 kg N ha-1 and 75 kg P2O5 ha-1. Each year, since 1972 till now, we have sampled soil in the ploughed layer (0-0.4 m) to assess its pH (in water) and its content of organic carbon (SOC, Lotti method), total nitrogen (TN, Kjeldahl) and available phosphorus (P2O5, Olsen). To reduce the influence of crops and weather, statistical analyses were conducted on the averages of data obtained in the 4-year periods at the end of four 9-year cycles (1972-75, 81-84, 90-93 and 99-02). In 30 years, the continuous M1 supply without any inorganic integration increased SOC, TN and P2O5 by +3.6 t ha-1 (+11%), +1.09 t

  14. Temporal changes of selected chemical properties in three manure - amended soils of Hawaii.

    PubMed

    Ortiz Escobar, M E; Hue, N V

    2008-12-01

    Soil amendment with organic materials (crop residues animal manure, and green manure) reportedly has positive effects on soil properties, from acidity to plant-nutrient availability. To examine that hypothesis, an incubation study was conducted to assess the changes in some chemical properties of three different tropical soils (Andisol, Ultisol, and Oxisol) amended with chicken manure and green manure (Leucaena leucocephala) at the rate of 10tha(-1). The results showed that organic amendments raised soil pH and EC, regardless of the type of manure used. Manuring lowered the concentrations of Mehlich-3 extractable Ca, P, Mn and Si in all soils and decreased the concentration of Mg in the Ultisol and Oxisol. However, manure amendment led to increases in the concentrations of Mg and K in the Andisol. Organic amendments caused a decrease in KCl extractable Al. Initial soluble C levels were highest in the Oxisol (60micromolg(-1)) and lowest in the Andisol (20micromolg(-1)). The concentration of soluble C decreased exponentially with duration of incubation. Three low molecular weight organic molecules (acetic acid, catechol and oxalic acid) out of the eight tested were found in all manure-amended soils. This study quantified the release of some Al chelating organic acids, the reduction of exchangeable Al, and the changes in major plant-nutrients when organic materials were added to nutrient poor, tropical acid soils.

  15. Microbiological features and bioactivity of a fermented manure product (preparation 500) used in biodynamic agriculture.

    PubMed

    Giannattasio, Matteo; Vendramin, Elena; Fornasier, Flavio; Alberghini, Sara; Zanardo, Marina; Stellin, Fabio; Concheri, Giuseppe; Stevanato, Piergiorgio; Ertani, Andrea; Nardi, Serenella; Rizzi, Valeria; Piffanelli, Pietro; Spaccini, Riccardo; Mazzei, Pierluigi; Piccolo, Alessandro; Squartini, Andrea

    2013-05-01

    The fermented manure derivative known as Preparation 500 is traditionally used as a field spray in biodynamic agriculture for maintaining and increasing soil fertility. This work aimed at characterizing the product from a microbiological standpoint and at assaying its bioactive properties. The approach involved molecular taxonomical characterization of the culturable microbial community; ARISA fingerprints of the total bacteria and fungal communities; chemical elemental macronutrient analysis via a combustion analyzer; activity assays for six key enzymes; bioassays for bacterial quorum sensing and chitolipooligosaccharide production; and plant hormonelike activity. The material was found to harbor a bacterial community of 2.38 × 10(8) CFU/g dw dominated by Grampositives with minor instances of Actinobacteria and Gammaproteobacteria. ARISA showed a coherence of bacterial assemblages in different preparation lots of the same year in spite of geographic origin. Enzymatic activities showed elevated values of beta-glucosidase, alkaline phosphatase, chitinase, and esterase. The preparation had no quorum sensing-detectable signal, and no rhizobial nod gene-inducing properties, but displayed a strong auxin-like effect on plants. Enzymatic analyses indicated a bioactive potential in the fertility and nutrient cycling contexts. The IAA activity and microbial degradation products qualify for a possible activity as soil biostimulants. Quantitative details and possible modes of action are discussed.

  16. Alternative soil quality indices for evaluating the effect of intensive cropping, fertilisation and manuring for 31 years in the semi-arid soils of India.

    PubMed

    Masto, Reginald Ebhin; Chhonkar, Pramod K; Singh, Dhyan; Patra, Ashok K

    2008-01-01

    Soil quality assessment provides a tool for evaluating the sustainability of alternative soil management practices. Our objective was to develop the most sensitive soil quality index for evaluating fertilizer, farm yard manure (FYM), and crop management practices on a semiarid Inceptisol in India. Soil indicators and crop yield data from a long-term (31 years) fertilizer, manure, and crop rotation (maize, wheat, cowpea, pearl millet) study at the Indian Agricultural Research Institute (IARI) near New Delhi were used. Plots receiving optimum NPK, super optimum NPK and optimum NPK + FYM had better values for all the parameters analyzed. Biological, chemical, and physical soil quality indicator data were transformed into scores (0 to 1) using both linear and non-linear scoring functions, and combined into soil quality indices using unscreened transformations, regression equation, or principal component analysis (PCA). Long-term application of optimum inorganic fertilizers (NPK) resulted in higher soil quality ratings for all methods, although the highest values were obtained for treatment, which included FYM. Correlations between wheat (Triticum aestivum L.) yield and the various soil quality indices showed the best relationship (highest r) between yield and a PCA-derived SQI. Differences in SQI values suggest that the control (no NPK, no manure) and N only treatments were degrading, while soils receiving animal manure (FYM) or super optimum NPK fertilizer had the best soil quality, respectively. Lower ratings associated with the N only and NP treatments suggest that one of the most common soil management practices in India may not be sustainable. A framework for soil quality assessment is proposed.

  17. Manure biochar influence upon soil properties, phosphorus distribution and phosphatase activities: A microcosm incubation study.

    PubMed

    Jin, Yi; Liang, Xinqiang; He, Miaomiao; Liu, Yu; Tian, Guangming; Shi, Jiyan

    2016-01-01

    Using manure-derived-biochar as an alternative phosphorus (P) source has bright future prospects to improve soil P status. A 98-day microcosm incubation experiment was set up for two soils which were amended with manure biochar at proportions of 0, 0.5% and 1.5%. Swine manure samples were air-dried and manure biochar was prepared by pyrolysis at 400 °C for 4 h. As determined by P-31 nuclear magnetic resonance ((31)P NMR) spectroscopy, manure biochar mainly increased the contents and fractions of orthophosphate and pyrophosphate in two soils, while decreased those of monoesters (P<0.05). At the end of incubation, 1.5% of manure biochar raised soil pH by 0.5 and 0.6 units, cation exchange capacity by 16.9% and 32.2%, and soil total P by 82.1% and 81.1% for silt loam and clay loam soils, respectively, as compared with those soils without biochar. Simultaneously, 1.5% of manure biochar decreased acid phosphomonoesterase activities by 18.6% and 34.0% for clay loam and silt loam, respectively; while it increased alkaline phosphomonoesterase activities by 28.5% and 95.1% for clay loam and silt loam, respectively. The enhancement of soil P availability after manure biochar addition was firstly due to the orthophosphate and pyrophosphate as the major P species in manure biochar which directly increased contents of soil inorganic P, and also attributed to the decomposition of some organic P like monoesters by enhanced alkaline phosphomonoesterase activities from manure biochar addition.

  18. Response of Plant Parasitic and Free Living Soil Nematodes to Composted Animal Manure Soil Amendments

    PubMed Central

    Renčo, M.; Kováčik, P.

    2012-01-01

    In an outside pot experiment, dry pig manure processed on pine sawdust litter and fermented for seven days by house fly larvae (fermented manure), and pine sawdust applied alone, and in combination with a spring application of inorganic nitrogen fertilizer were used to determine their effects on plant parasitic and free-living soil nematodes on sugar beets (cv. Antek). Non amended soil was used as a control. All treatments with fermented pig manure and sawdust with nitrogen fertilizer decreased number of plant parasitic nematodes and also root-fungal feeding nematodes compared to the untreated control. Sawdust applied alone had no effect on plant parasitic and root-fungal feeding nematode suppression. Free-living nematodes which were mainly bacteriovores and fungivores were significantly more abundant in soil amended with fermented pig manure, while the sawdust had no effect on these nematodes. The effect of all tested treatments on omnivores-predators was rather random, and in general, the number of these nematodes decreased after soil amendment applications compared to the untreated control. PMID:23482503

  19. Occurrence and movement of antibiotic resistant bacxteria, in tile-drained agricultural fields receiving swine manure

    USDA-ARS?s Scientific Manuscript database

    The use of tylosin at subtherapeutic levels by the swine industry provides selective pressure for the development of antibiotic resistance in gastrointestinal bacteria. The land application of swine manure to drained agricultural fields might accelerate the transport of pathogen indicators such as e...

  20. Application of a green manure and green manure composted with beet vinasse on soil restoration: effects on soil properties.

    PubMed

    Tejada, M; Gonzalez, J L; García-Martínez, A M; Parrado, J

    2008-07-01

    Beet vinasse (BV), a green manure constituted by Trifolium pratense L. uncomposted (TP) and composted with beet vinasse (at 1:1 rate, (TP+BV)1, and 2:1 rate, (TP+BV)2) at 10t organic matter ha(-1) rate were applied during a period of four years for purpose of restoration of a Xelloric Calciorthid located near Seville (Guadalquivir Valley, Andalusia, Spain). The effect on the plant cover, soil physical (structural stability and bulk density), chemical (exchangeable sodium percentage), and biological properties (microbial biomass, soil respiration and enzymatic activities such as dehydrogenase, urease, beta-glucosidase, phosphatase and arylsulfatase) were determined. The application of BV had a detrimental impact on soil physical (structural stability decreased 16.5% and bulk density increased 18.7% respect to the control soil), chemical (exchangeable sodium percentage increased 87.3% respect to the control soil), and biological properties (microbial biomass, soil respiration, and dehydrogenase, urease, beta-glucosidase, phosphatase and arylsulfatase activities decreased by 53.5%, 24.5%, 27.8%, 15%, 39.7%, 42.7%, and 65.6%, respectively with respect to the control soil), probably because high quantities of monovalent cations (Na principally) were introduced into the soil by the vinasse, thus destabilizing its structure. The application of TP had a positive impact on soil physical (structural stability increased 5.9% and bulk density decreased 6.1% respect to the control soil), and biological properties (microbial biomass, soil respiration, and dehydrogenase, urease, beta-glucosidase, phosphatase and arylsulfatase activities increased by 66.3%, 45.6%, 97.7%, 98.9%, 97.7%, 87.2%, and 89.4%, respectively with respect to the control soil). However, when BV was co-composted with a green manure, principally at a 2:1 rate, the resulting compost had a positive effect on soil physical (structural stability increased 10.5% and bulk density decreased 13.5% respect to the

  1. Response of Soil Mesofauna to Long-Term Application of Feedlot Manure on Irrigated Cropland.

    PubMed

    Miller, Jim J; Battigelli, Jeff P; Beasley, Bruce W; Drury, Craig F

    2017-01-01

    Long-term application of feedlot manure to cropland may influence soil mesofauna. These organisms affect the health, structure, and fertility of soils, organic matter decomposition, and crop growth. The objective was to study the long-term (16-17 yr) influence of feedlot manure type and bedding on soil mesofauna over 2 yr (2014-2015). Stockpiled or composted feedlot manure with straw (ST) or wood-chip (WD) bedding (plus unamended control) was annually applied (13 Mg ha dry wt.) to an irrigated clay loam soil with continuous barley (). Intact cores were taken from surface (0-5 cm) soil in the fall, and the densities of Acari (mites) suborders and Collembola (springtails) families were determined. Manure type had no significant ( > 0.05) effect on soil mesofauna density. In contrast, there was a significant two- to sixfold increase in density with WD- compared with ST-amended soils of total Acari in 2014 and 2015, as well as total Collembola, total Acari and Collembola, oribatid mites, and entomobryid springtails in 2014. The bedding effect was attributed to significantly greater soil water content and lower bulk density for WD than ST. Density of soil mesofauna was not significantly greater in amended soils than in unamended soils. A shift by feedlot producers from stockpiled to composted feedlot manure application should have no effect on soil mesofauna density, whereas a shift from ST to WD bedding may increase the density of certain soil mesofauna, which may have a beneficial effect on soil.

  2. Fate of Mycobacterium avium subsp. paratuberculosis after Application of Contaminated Dairy Cattle Manure to Agricultural Soils▿

    PubMed Central

    Salgado, M.; Collins, M. T.; Salazar, F.; Kruze, J.; Bölske, G.; Söderlund, R.; Juste, R.; Sevilla, I. A.; Biet, F.; Troncoso, F.; Alfaro, M.

    2011-01-01

    Details regarding the fate of Mycobacterium avium subsp. paratuberculosis (basonym, Mycobacterium paratuberculosis) after manure application on grassland are unknown. To evaluate this, intact soil columns were collected in plastic pipes (lysimeters) and placed under controlled conditions to test the effect of a loamy or sandy soil composition and the amount of rainfall on the fate of M. paratuberculosis applied to the soil surface with manure slurry. The experiment was organized as a randomized design with two factors and three replicates. M. paratuberculosis-contaminated manure was spread on the top of the 90-cm soil columns. After weekly simulated rainfall applications, water drainage samples (leachates) were collected from the base of each lysimeter and cultured for M. paratuberculosis using Bactec MGIT ParaTB medium and supplements. Grass was harvested, quantified, and tested from each lysimeter soil surface. The identity of all probable M. paratuberculosis isolates was confirmed by PCR for IS900 and F57 genetic elements. There was a lag time of 2 months after each treatment before M. paratuberculosis was found in leachates. The greatest proportions of M. paratuberculosis-positive leachates were from sandy-soil lysimeters in the manure-treated group receiving the equivalent of 1,000 mm annual rainfall. Under the higher rainfall regimen (2,000 mm/year), M. paratuberculosis was detected more often from lysimeters with loamy soil than sandy soil. Among all lysimeters, M. paratuberculosis was detected more often in grass clippings than in lysimeter leachates. At the end of the trial, lysimeters were disassembled and soil cultured at different depths, and we found that M. paratuberculosis was recovered only from the uppermost levels of the soil columns in the treated group. Factors associated with M. paratuberculosis presence in leachates were soil type and soil pH (P < 0.05). For M. paratuberculosis presence in grass clippings, only manure application showed a

  3. Effect of green manure on the incidence of cyanogenic Pseudomonas strains in hop garden soils.

    PubMed

    Paszkowski, Wojciech L; Dwornikiewicz, Jerzy

    2003-05-01

    Incidence of cyanogenic Pseudomonas strains in hop garden soils in relation to the kind of fertilization was studied. Incidence differed with respect to the fertilization treatment and the age of the plantation. Amendment of soil with rye and with white mustard as green manures limited the number of cyanogenic Pseudomonas strains relative to farmyard manures and NPK fertilization. Among all fertilization treatments, cyanogenic Pseudomonas spp. strains had lowest populations in soils amended with white mustard.

  4. Leachate water quality of soils amended with different swine manure-based amendments

    USDA-ARS?s Scientific Manuscript database

    In the face of the rising level of manure production from concentrated animal feeding operations (CAFOs), management options are being sought that can provide nutrient recycling for plant growth and improved soil conditions with minimal environmental impacts. Alternatives to direct manure applicatio...

  5. Leachate water quality from soils amended with swine manure based biochars

    USDA-ARS?s Scientific Manuscript database

    In the face of the rising level of manure production from concentrated animal feeding operations (CAFOs), management options are being sought that can provide nutrient recycling for plant growth and improved soil conditions with minimal environmental impacts. Alternatives to direct manure applicatio...

  6. Persistence of Escherichia coli in manure-amended soil in Pennsylvania

    USDA-ARS?s Scientific Manuscript database

    Potential for pathogen transfer from soils amended with untreated animal manure to crops and the frequent occurrence of foodborne illness outbreaks involving Escherichia coli O157:H7 prompted the FDA proposal requiring a 9-month waiting period before harvesting produce from manure-amended fields. A...

  7. Dairy heifer manure management, dietary phosphorus, and soil test P effects on runoff phosphorus

    USDA-ARS?s Scientific Manuscript database

    Manure application to cropland can contribute to runoff losses of P and eutrophication of surface waters. We conducted a series of three rainfall simulation experiments to assess the effects of dairy heifer dietary P, manure application method, application rate, and soil test P on runoff P losses fr...

  8. Effect of green manure on E. coli O157:H7 survival in soil

    USDA-ARS?s Scientific Manuscript database

    Green manure is the remnants of crops (stems, outer leaves, tops of leaves, etc.) that remain in the field after harvest, and are plowed back into the field to increase fertility. The role of green manure in the survival of E. coli O157:H7 in soil has not been examined. We evaluated three types of g...

  9. Fungal Bioconversion of Bio-Solids and Chicken Manure to Increase Soil Quality

    USDA-ARS?s Scientific Manuscript database

    The utilization of agro-chemical products such as pesticides and fertilizers has allowed the increase in food production. Poultry manure and manure from different animals have been used as alternative to improve soil quality, and therefore, helped increase crop production. Nevertheless, removal of t...

  10. Phoshatase activities and their effects on phosphorus availability in soils amended with livestock manures

    USDA-ARS?s Scientific Manuscript database

    The application of livestock manures can impact factors related to phosphorus (P) cycling and concentrations of plant-available P in soils. Specific manure physicochemical properties differ due to livestock species and management practices, which may result in differences in parameters related to so...

  11. Survival and persistence of non-pathogenic Escherichia coli and attenuated Escherichia coli O157:H7 in soils amended with animal manure in a greenhouse environment

    USDA-ARS?s Scientific Manuscript database

    Biological soil amendments (BSA's), including dairy cattle, poultry litter, and horse manure, play an important role in agriculture but may contain pathogens that can contaminate raw or ready-to-eat fruit and vegetable crops that are consumed raw. Proposed FDA standards include a 90- or 120-day inte...

  12. Dynamics of soil bacterial communities in response to repeated application of manure containing sulfadiazine.

    PubMed

    Ding, Guo-Chun; Radl, Viviane; Schloter-Hai, Brigitte; Jechalke, Sven; Heuer, Holger; Smalla, Kornelia; Schloter, Michael

    2014-01-01

    Large amounts of manure have been applied to arable soils as fertilizer worldwide. Manure is often contaminated with veterinary antibiotics which enter the soil together with antibiotic resistant bacteria. However, little information is available regarding the main responders of bacterial communities in soil affected by repeated inputs of antibiotics via manure. In this study, a microcosm experiment was performed with two concentrations of the antibiotic sulfadiazine (SDZ) which were applied together with manure at three different time points over a period of 133 days. Samples were taken 3 and 60 days after each manure application. The effects of SDZ on soil bacterial communities were explored by barcoded pyrosequencing of 16S rRNA gene fragments amplified from total community DNA. Samples with high concentration of SDZ were analyzed on day 193 only. Repeated inputs of SDZ, especially at a high concentration, caused pronounced changes in bacterial community compositions. By comparison with the initial soil, we could observe an increase of the disturbance and a decrease of the stability of soil bacterial communities as a result of SDZ manure application compared to the manure treatment without SDZ. The number of taxa significantly affected by the presence of SDZ increased with the times of manure application and was highest during the treatment with high SDZ-concentration. Numerous taxa, known to harbor also human pathogens, such as Devosia, Shinella, Stenotrophomonas, Clostridium, Peptostreptococcus, Leifsonia, Gemmatimonas, were enriched in the soil when SDZ was present while the abundance of bacteria which typically contribute to high soil quality belonging to the genera Pseudomonas and Lysobacter, Hydrogenophaga, and Adhaeribacter decreased in response to the repeated application of manure and SDZ.

  13. Field-scale evaluation of water fluxes and manure solution leaching in feedlot pen soils.

    PubMed

    García, Ana R; Maisonnave, Roberto; Massobrio, Marcelo J; Fabrizio de Iorio, Alicia R

    2012-01-01

    Accumulation of beef cattle manure on feedlot pen surfaces generates large amounts of dissolved solutes that can be mobilized by water fluxes, affecting surface and groundwater quality. Our objective was to examine the long-term impacts of a beef cattle feeding operation on water fluxes and manure leaching in feedlot pens located on sandy loam soils of the subhumid Sandy Pampa region in Argentina. Bulk density, gravimetric moisture content, and chloride concentration were quantified. Rain simulation trials were performed to estimate infiltration and runoff rates. Using chloride ion as a tracer, profile analysis techniques were applied to estimate the soil moisture flux and manure conservative chemical components leaching rates. An organic stratum was found over the surface of the pen soil, separated from the underlying soil by a highly compacted thin layer (the manure-soil interface). The soil beneath the organic layer showed greater bulk density in the A horizon than in the control soil and had greater moisture content. Greater concentrations of chloride were found as a consequence of the partial sealing of the manure-soil interface. Surface runoff was the dominant process in the feedlot pen soil, whereas infiltration was the main process in control soil. Soil moisture flux beneath pens decreased substantially after 15 yr of activity. The estimated minimum leaching rate of chloride was 13 times faster than the estimated soil moisture flux. This difference suggests that chloride ions are not exclusively transported by advective flow under our conditions but also by solute diffusion and preferential flow.

  14. Accumulation and mobility of zinc in soil amended with different levels of pig-manure compost.

    PubMed

    Asada, Kei; Toyota, Koki; Nishimura, Taku; Ikeda, Jun-Ichi; Hori, Kaneaki

    2010-05-01

    Applying manure compost not only results in zinc accumulation in the soil but also causes an increase in zinc mobility and enhances zinc leaching. In this study, the physical and chemical characteristics of zinc, zinc profiles, and zinc balance were investigated to characterise the fate of zinc in fields where the quality and amount of pig manure compost applied have been known for 13 years. Moreover, we determined zinc fractionation in both 0.1 mol L(-1)HCl-soluble (mobile) and -insoluble (immobile) fractions. Adsorption of zinc in the soil was enhanced with increasing total carbon content following the application of pig manure compost. The 159.6 mg ha(-1) year(-1)manure applied plot (triplicate) exceeded the Japanese regulatory level after only 6 years of applying pig manure compost, whereas the 53.2 mg ha(-1) year(-1) manure applied plot (standard) reached the regulatory level after 13 years. The zinc loads in the plots were 17.0 and 5.6 kg ha(-1) year(-1), respectively. However, 5.9 % and 17.2 % of the zinc loaded in the standard and the triplicate pig manure compost applied plots, respectively, were estimated to be lost from the plough layer. Based on the vertical distribution of mobile and immobile zinc content, a higher rate of applied manure compost caused an increase in the mobile zinc fraction to a depth of 40 cm. Although the adsorption capacity of zinc was enhanced following the application of pig manure compost, a greater amount of mobile zinc could move downward through the manure amended soil than through non manure-amended soil.

  15. Manure and tillage use in remediation of eroded land and impacts on soil chemical properties

    PubMed Central

    Mikha, Maysoon M.; Benjamin, Joseph G.; Vigil, Merle F.; Poss, David J.

    2017-01-01

    Soil loss through wind and water erosion is an ongoing problem in semiarid regions. A thin layer of top soil loss over a hectare of cropland could be corresponding to tons of productive soil loss per hectare. The objectives of this study were to evaluate the influence of beef feedlot manure, tillage and legume grass mixtures on changes in soil quality and nutrient components. The study was initiated in 2006 on an eroded site near Akron, Colorado, on a Norka-Colby very-fine sandy loam (fine-silty, mixed, mesic, Aridic, Argiustolls). Tillage treatments were no-tillage, shallow tillage (sweeps operations with V-blade) and deep tillage (DT; moldboard plow operations). In one set of plots, DT was implemented biannually (DT-2); and in another set the DT was done once at the initiation of the experiment in 2006. Amendments consisted of beef manure and urea (46-0-0), N fertilizer. Both amendments were added at low and high rates. A control treatment, with no fertilizer or manure added, was included with no-tillage and shallow tillage only. Six years of manure addition and tillage significantly altered soil chemical properties compared with fertilizer and grass legume mixtures. Across all the tillage treatments, at the 0–30 cm depth, soil pH from 2006 to 2012, was reduced 1.8 fold with high-manure compared with high-fertilizer treatment. Soil EC, Na, and SAR increased by 2.7 fold while soil P increase by 3.5 fold with high-manure treatment compared with low-manure from 2006 to 2012 across all the tillage treatments at the surface 0–30 cm. Soil organic carbon associated with high-manure was 71% higher than low-manure and 230% higher than high-fertilizer treatments in the 0–60 cm depth. Similar patterns were observed with soil total N. Overall, manure amendments greatly improved the soil nutrient status on this eroded site. However, the legume grass mixtures showed little effect on improving soils chemical properties. The micronutrients supplied by manure improved the

  16. Manure and tillage use in remediation of eroded land and impacts on soil chemical properties.

    PubMed

    Mikha, Maysoon M; Benjamin, Joseph G; Vigil, Merle F; Poss, David J

    2017-01-01

    Soil loss through wind and water erosion is an ongoing problem in semiarid regions. A thin layer of top soil loss over a hectare of cropland could be corresponding to tons of productive soil loss per hectare. The objectives of this study were to evaluate the influence of beef feedlot manure, tillage and legume grass mixtures on changes in soil quality and nutrient components. The study was initiated in 2006 on an eroded site near Akron, Colorado, on a Norka-Colby very-fine sandy loam (fine-silty, mixed, mesic, Aridic, Argiustolls). Tillage treatments were no-tillage, shallow tillage (sweeps operations with V-blade) and deep tillage (DT; moldboard plow operations). In one set of plots, DT was implemented biannually (DT-2); and in another set the DT was done once at the initiation of the experiment in 2006. Amendments consisted of beef manure and urea (46-0-0), N fertilizer. Both amendments were added at low and high rates. A control treatment, with no fertilizer or manure added, was included with no-tillage and shallow tillage only. Six years of manure addition and tillage significantly altered soil chemical properties compared with fertilizer and grass legume mixtures. Across all the tillage treatments, at the 0-30 cm depth, soil pH from 2006 to 2012, was reduced 1.8 fold with high-manure compared with high-fertilizer treatment. Soil EC, Na, and SAR increased by 2.7 fold while soil P increase by 3.5 fold with high-manure treatment compared with low-manure from 2006 to 2012 across all the tillage treatments at the surface 0-30 cm. Soil organic carbon associated with high-manure was 71% higher than low-manure and 230% higher than high-fertilizer treatments in the 0-60 cm depth. Similar patterns were observed with soil total N. Overall, manure amendments greatly improved the soil nutrient status on this eroded site. However, the legume grass mixtures showed little effect on improving soils chemical properties. The micronutrients supplied by manure improved the soil

  17. [Form tendency and bio-availability dynamics of Cu and Zn in different farm soils after application of organic fertilizer of livestock and poultry manures].

    PubMed

    Shang, He-ping; Li, Yang; Zhang, Tao; Su, De-chun

    2015-01-01

    Soil incubation experiments were conducted with different sources of manures containing heavy metals to evaluate the bioavailability of heavy metals (Cu and Zn) and their form transformation in different soils. This study may assist in developing strategies to ascertain the loads of heavy metals which entered into soils together with manures, and promote policies to evaluate the ecological risk in agriculture soils. The results showed that, during the six months of soil incubation, the pH value of acidic soil increased and the pH value of calcareous soil reduced. After adding chicken manures, the contents of available Cu in both calcareous and acid soils were significant lower than those in the equivalent inorganic salt treatments, but there was no significant difference between the treatments in the contents of available Zn in both calcareous and acid soils. Furthermore, there were also no significant differences between pig matures and the equivalent inorganic salt treatments in the contents of available Cu and Zn in both calcareous and acid soils. The results of form tendency showed that the main forms of Cu and Zn in both calcareous and acid soils, which entered into soils together with manures, were exchangeable, carbonate, Fe-Mn oxides, and organic. And the proportions of different heavy metals species in calcareous and acid soils were different with different manures sources. After six months of incubation, the contents of exchangeable and Fe-Mn oxides Cu, Zn were lower than those in the equivalent inorganic salt treatments, the contents of organics Cu and Zn were higher than those in the equivalent inorganic salt treatments, and other Cu and Zn forms in soils showed no difference with inorganic salt treatments.

  18. Application of swine manure on agricultural fields contributes to extended-spectrum β-lactamase-producing Escherichia coli spread in Tai'an, China.

    PubMed

    Gao, Lili; Hu, Jiaqing; Zhang, Xiaodan; Wei, Liangmeng; Li, Song; Miao, Zengmin; Chai, Tongjie

    2015-01-01

    The prevalence of extended-spectrum beta-lactamase (ESBL)-producing Escherichia coli (E. coli) is increasing rapidly in both hospital environments and animal farms. A lot of animal manure has been directly applied into arable fields in developing countries. But the impact of ESBL-positive bacteria from animal manure on the agricultural fields is sparse, especially in the rural regions of Tai'an, China. Here, we collected 29, 3, and 10 ESBL-producing E. coli from pig manure, compost, and soil samples, respectively. To track ESBL-harboring E. coli from agricultural soil, these isolates of different sources were analyzed with regard to antibiotic resistance profiles, ESBL genes, plasmid replicons, and enterobacterial repetitive intergenic consensus (ERIC)-polymerase chain reaction (PCR) typing. The results showed that all the isolates exhibited multi-drug resistant (MDR). CTX-M gene was the predominant ESBL gene in the isolates from pig farm samples (30/32, 93.8%) and soil samples (7/10, 70.0%), but no SHV gene was detected. Twenty-five isolates contained the IncF-type replicon of plasmid, including 18 strains (18/32, 56.3%) from the pig farm and 7 (7/10, 70.0%) from the soil samples. ERIC-PCR demonstrated that 3 isolates from soil had above 90% genetic similarity with strains from pig farm samples. In conclusion, application of animal manure carrying drug-resistant bacteria on agricultural fields is a likely contributor to antibiotic resistance gene spread.

  19. Manure and nitrogen application enhances soil phosphorus mobility in calcareous soil in greenhouses.

    PubMed

    Yan, Zhengjuan; Chen, Shuo; Li, Junliang; Alva, Ashok; Chen, Qing

    2016-10-01

    Over many years, high phosphorus (P) loading for intensive vegetable cropping in greenhouses of North China has contributed to excessive P accumulation, resulting in environmental risk. In this study, the influences of manure and nitrogen (N) application on the transformation and transport of soil P were investigated after nine years in a greenhouse tomato double cropping system (winter-spring and autumn-winter seasons). High loading of manure significantly increased the soil inorganic P (Pi), inositol hexakisphosphate (IHP), mobile P and P saturation ratio (PSR, >0.7 in 0-30 cm depth soil; PSR was estimated from P/(Fe + Al) in an oxalate extract of the soil). The high rate of N fertilizer application to the studied calcareous soil with heavy loading of manure increased the following: (i) mobile organic P (Po) and Pi fractions, as evidenced by the decrease in the ratio of monoesters to diesters and the proportion of stable Pi (i.e., HCl-Pi) in total P (Pt) in 0-30 cm depth soil; (ii) relative distribution of Po in the subsoil layer; and (iii) P leaching to soil depths below 90 cm and the proportion of Po in Pt in the leachate. More acidic soil due to excessive N application increased P mobility and leaching. The increase in Ox-Al (oxalate-extractable Al) and the proportion of microbe-associated Po related to N application at soil depths of 0-30 cm suggested decrease in the net Po mineralization, which may contribute to downward transport of Po in the soil profile.

  20. Dairy heifer manure management, dietary phosphorus, and soil test P effects on runoff phosphorus.

    PubMed

    Jokela, William E; Coblentz, Wayne K; Hoffman, Patrick C

    2012-01-01

    Manure application to cropland can contribute to runoff losses of P and eutrophication of surface waters. We conducted a series of three rainfall simulation experiments to assess the effects of dairy heifer dietary P, manure application method, application rate, and soil test P on runoff P losses from two successive simulated rainfall events. Bedded manure (18-21% solids) from dairy heifers fed diets with or without supplemental P was applied on a silt loam soil packed into 1- by 0.2-m sheet metal pans. Manure was either surface-applied or incorporated (Experiment 1) or surface-applied at two rates (Experiment 2) to supply 26 to 63 kg P ha. Experiment 3 evaluated runoff P from four similar nonmanured soils with average Bray P1-extractable P levels of 11, 29, 51, and 75 mg kg. We measured runoff quantity, total P (TP), dissolved reactive P (DRP), and total and volatile solids in runoff collected for 30 min after runoff initiation from two simulated rain events (70 mm h) 3 or 4 d apart. Manure incorporation reduced TP and DRP concentrations and load by 85 to 90% compared with surface application. Doubling the manure rate increased runoff DRP and TP concentrations an average of 36%. In the same experiment, P diet supplementation increased water-extractable P in manure by 100% and increased runoff DRP concentration threefold. Concentrations of solids, TP, and DRP in runoff from Rain 2 were 25 to 75% lower than from Rain 1 in Experiments 1 and 2. Runoff DRP from nonmanured soils increased quadratically with increasing soil test P. These results show that large reductions in P runoff losses can be achieved by incorporation of manure, avoiding unnecessary diet P supplementation, limiting manure application rate, and managing soils to prevent excessive soil test P levels.

  1. Green manure addition to soil increases grain zinc concentration in bread wheat.

    PubMed

    Aghili, Forough; Gamper, Hannes A; Eikenberg, Jost; Khoshgoftarmanesh, Amir H; Afyuni, Majid; Schulin, Rainer; Jansa, Jan; Frossard, Emmanuel

    2014-01-01

    Zinc (Zn) deficiency is a major problem for many people living on wheat-based diets. Here, we explored whether addition of green manure of red clover and sunflower to a calcareous soil or inoculating a non-indigenous arbuscular mycorrhizal fungal (AMF) strain may increase grain Zn concentration in bread wheat. For this purpose we performed a multifactorial pot experiment, in which the effects of two green manures (red clover, sunflower), ZnSO4 application, soil γ-irradiation (elimination of naturally occurring AMF), and AMF inoculation were tested. Both green manures were labeled with 65Zn radiotracer to record the Zn recoveries in the aboveground plant biomass. Application of ZnSO4 fertilizer increased grain Zn concentration from 20 to 39 mg Zn kg-1 and sole addition of green manure of sunflower to soil raised grain Zn concentration to 31 mg Zn kg-1. Adding the two together to soil increased grain Zn concentration even further to 54 mg Zn kg-1. Mixing green manure of sunflower to soil mobilized additional 48 µg Zn (kg soil)-1 for transfer to the aboveground plant biomass, compared to the total of 132 µg Zn (kg soil)-1 taken up from plain soil when neither green manure nor ZnSO4 were applied. Green manure amendments to soil also raised the DTPA-extractable Zn in soil. Inoculating a non-indigenous AMF did not increase plant Zn uptake. The study thus showed that organic matter amendments to soil can contribute to a better utilization of naturally stocked soil micronutrients, and thereby reduce any need for major external inputs.

  2. Green Manure Addition to Soil Increases Grain Zinc Concentration in Bread Wheat

    PubMed Central

    Aghili, Forough; Gamper, Hannes A.; Eikenberg, Jost; Khoshgoftarmanesh, Amir H.; Afyuni, Majid; Schulin, Rainer; Jansa, Jan; Frossard, Emmanuel

    2014-01-01

    Zinc (Zn) deficiency is a major problem for many people living on wheat-based diets. Here, we explored whether addition of green manure of red clover and sunflower to a calcareous soil or inoculating a non-indigenous arbuscular mycorrhizal fungal (AMF) strain may increase grain Zn concentration in bread wheat. For this purpose we performed a multifactorial pot experiment, in which the effects of two green manures (red clover, sunflower), ZnSO4 application, soil γ-irradiation (elimination of naturally occurring AMF), and AMF inoculation were tested. Both green manures were labeled with 65Zn radiotracer to record the Zn recoveries in the aboveground plant biomass. Application of ZnSO4 fertilizer increased grain Zn concentration from 20 to 39 mg Zn kg−1 and sole addition of green manure of sunflower to soil raised grain Zn concentration to 31 mg Zn kg−1. Adding the two together to soil increased grain Zn concentration even further to 54 mg Zn kg−1. Mixing green manure of sunflower to soil mobilized additional 48 µg Zn (kg soil)−1 for transfer to the aboveground plant biomass, compared to the total of 132 µg Zn (kg soil)−1 taken up from plain soil when neither green manure nor ZnSO4 were applied. Green manure amendments to soil also raised the DTPA-extractable Zn in soil. Inoculating a non-indigenous AMF did not increase plant Zn uptake. The study thus showed that organic matter amendments to soil can contribute to a better utilization of naturally stocked soil micronutrients, and thereby reduce any need for major external inputs. PMID:24999738

  3. [Effects of nitrogen application and winter green manure on soil active organic carbon and the soil carbon pool management index].

    PubMed

    Yang, Bin-Juan; Huang, Guo-Qin; Lan, Yan; Chen, Hong-Jun; Wang, Shu-Bin

    2014-10-01

    Based on a cropping system of "winter green manure-double rice", the 4 x 4 two-factor test was used to study the effects of different nitrogen (N) application levels and winter green manure application on soil active organic carbon (AOC) and the C pool management index. The aim was to explore the ecological effects of winter green manure on soil improvement and determine the appropriate application levels of N fertilizer and winter green manure for improved rice yield. Results were as follows: 1) Compared with the control, the SOC and AOC contents increased by 22.2% and 26.7%, respectively, under the green manure only treatment, but the SOC contents decreased by 0.6%-3.4% under the single N fertilizer treatment. Compared with the control, the soil C pool management index increased by 24.55 and 15.17 under the green manure only and green manure plus N fertilizer treatments, respectively, and reduced by 2.59 under the single N fertilizer treatment. Compared with no fertilization, the average microbial biomass carbon (MBC) increased by 54.0%, 95.2% and 14.3% under the green manure, green manure plus N fertilizer and single N fertilizer treatments, respectively. 2) The soil AOC content was significantly positively correlated with the C pool management index (P < 0.01), and had a significant correlation with dis- solved organic C and MBC (P < 0.05). Rice yield was significantly positively correlated with AOC contents and the C pool management index, and the correlation coefficient was significantly greater than that with the total organic C. These results suggested that application of winter green manure at proper rates with inorganic fertilizer could increase SOC contents and the soil C pool management index, improve soil quality and fertility.

  4. Safely Coupling Livestock and Crop Production Systems: How Rapidly Do Antibiotic Resistance Genes Dissipate in Soil following a Commercial Application of Swine or Dairy Manure?

    PubMed Central

    Marti, Romain; Tien, Yuan-Ching; Murray, Roger; Scott, Andrew; Sabourin, Lyne

    2014-01-01

    Animal manures recycled onto crop production land carry antibiotic-resistant bacteria. The present study evaluated the fate in soil of selected genes associated with antibiotic resistance or genetic mobility in field plots cropped to vegetables and managed according to normal farming practice. Referenced to unmanured soil, fertilization with swine or dairy manure increased the relative abundance of the gene targets sul1, erm(B), str(B), int1, and IncW repA. Following manure application in the spring of 2012, gene copy number decayed exponentially, reaching background levels by the fall of 2012. In contrast, gene copy number following manure application in the fall of 2012 or spring of 2013 increased significantly in the weeks following application and then declined. In both cases, the relative abundance of gene copy numbers had not returned to background levels by the fall of 2013. Overall, these results suggest that under conditions characteristic of agriculture in a humid continental climate, a 1-year period following a commercial application of raw manure is sufficient to ensure that an additional soil burden of antibiotic resistance genes approaches background. The relative abundance of several gene targets exceeded background during the growing season following a spring application or an application done the previous fall. Results from the present study reinforce the advisability of treating manure prior to use in crop production systems. PMID:24632259

  5. Safely coupling livestock and crop production systems: how rapidly do antibiotic resistance genes dissipate in soil following a commercial application of swine or dairy manure?

    PubMed

    Marti, Romain; Tien, Yuan-Ching; Murray, Roger; Scott, Andrew; Sabourin, Lyne; Topp, Edward

    2014-05-01

    Animal manures recycled onto crop production land carry antibiotic-resistant bacteria. The present study evaluated the fate in soil of selected genes associated with antibiotic resistance or genetic mobility in field plots cropped to vegetables and managed according to normal farming practice. Referenced to unmanured soil, fertilization with swine or dairy manure increased the relative abundance of the gene targets sul1, erm(B), str(B), int1, and IncW repA. Following manure application in the spring of 2012, gene copy number decayed exponentially, reaching background levels by the fall of 2012. In contrast, gene copy number following manure application in the fall of 2012 or spring of 2013 increased significantly in the weeks following application and then declined. In both cases, the relative abundance of gene copy numbers had not returned to background levels by the fall of 2013. Overall, these results suggest that under conditions characteristic of agriculture in a humid continental climate, a 1-year period following a commercial application of raw manure is sufficient to ensure that an additional soil burden of antibiotic resistance genes approaches background. The relative abundance of several gene targets exceeded background during the growing season following a spring application or an application done the previous fall. Results from the present study reinforce the advisability of treating manure prior to use in crop production systems.

  6. Leachate water quality of soils amended with different swine manure-based amendments

    EPA Science Inventory

    In the face of the rising level of manure production from concentrated animal feeding operations (CAFOs), management options are being sought that can provide nutrient recycling for plant growth and improved soil conditions with minimal environmental impacts. Alternatives to dire...

  7. Leachate water quality of soils amended with different swine manure-based amendments

    EPA Science Inventory

    In the face of the rising level of manure production from concentrated animal feeding operations (CAFOs), management options are being sought that can provide nutrient recycling for plant growth and improved soil conditions with minimal environmental impacts. Alternatives to dire...

  8. Abundance of Antibiotic Resistance Genes in Bacteriophage following Soil Fertilization with Dairy Manure or Municipal Biosolids, and Evidence for Potential Transduction.

    PubMed

    Ross, Joseph; Topp, Edward

    2015-11-01

    Animal manures and municipal biosolids recycled onto crop production land carry antibiotic-resistant bacteria that can influence the antibiotic resistome of agricultural soils, but little is known about the contribution of bacteriophage to the dissemination of antibiotic resistance genes (ARGs) in this context. In this work, we quantified a set of ARGs in the bacterial and bacteriophage fractions of agricultural soil by quantitative PCR. All tested ARGs were present in both the bacterial and phage fractions. We demonstrate that fertilization of soil with dairy manure or human biosolids increases ARG abundance in the bacterial fraction but not the bacteriophage fraction and further show that pretreatment of dairy manure can impact ARG abundance in the bacterial fraction. Finally, we show that purified bacteriophage can confer increased antibiotic resistance to soil bacteria when combined with selective pressure. The results indicate that soilborne bacteriophage represents a substantial reservoir of antibiotic resistance and that bacteriophage could play a significant role in the horizontal transfer of resistance genes in the context of an agricultural soil microbiome. Overall, our work reinforces the advisability of composting or digesting fecal material prior to field application and suggests that application of some antibiotics at subclinical concentrations can promote bacteriophage-mediated horizontal transfer of ARGs in agricultural soil microbiomes.

  9. Abundance of Antibiotic Resistance Genes in Bacteriophage following Soil Fertilization with Dairy Manure or Municipal Biosolids, and Evidence for Potential Transduction

    PubMed Central

    Ross, Joseph

    2015-01-01

    Animal manures and municipal biosolids recycled onto crop production land carry antibiotic-resistant bacteria that can influence the antibiotic resistome of agricultural soils, but little is known about the contribution of bacteriophage to the dissemination of antibiotic resistance genes (ARGs) in this context. In this work, we quantified a set of ARGs in the bacterial and bacteriophage fractions of agricultural soil by quantitative PCR. All tested ARGs were present in both the bacterial and phage fractions. We demonstrate that fertilization of soil with dairy manure or human biosolids increases ARG abundance in the bacterial fraction but not the bacteriophage fraction and further show that pretreatment of dairy manure can impact ARG abundance in the bacterial fraction. Finally, we show that purified bacteriophage can confer increased antibiotic resistance to soil bacteria when combined with selective pressure. The results indicate that soilborne bacteriophage represents a substantial reservoir of antibiotic resistance and that bacteriophage could play a significant role in the horizontal transfer of resistance genes in the context of an agricultural soil microbiome. Overall, our work reinforces the advisability of composting or digesting fecal material prior to field application and suggests that application of some antibiotics at subclinical concentrations can promote bacteriophage-mediated horizontal transfer of ARGs in agricultural soil microbiomes. PMID:26341211

  10. Soil microbial community responses to antibiotic-contaminated manure under different soil moisture regimes.

    PubMed

    Reichel, Rüdiger; Radl, Viviane; Rosendahl, Ingrid; Albert, Andreas; Amelung, Wulf; Schloter, Michael; Thiele-Bruhn, Sören

    2014-01-01

    Sulfadiazine (SDZ) is an antibiotic frequently administered to livestock, and it alters microbial communities when entering soils with animal manure, but understanding the interactions of these effects to the prevailing climatic regime has eluded researchers. A climatic factor that strongly controls microbial activity is soil moisture. Here, we hypothesized that the effects of SDZ on soil microbial communities will be modulated depending on the soil moisture conditions. To test this hypothesis, we performed a 49-day fully controlled climate chamber pot experiments with soil grown with Dactylis glomerata (L.). Manure-amended pots without or with SDZ contamination were incubated under a dynamic moisture regime (DMR) with repeated drying and rewetting changes of >20 % maximum water holding capacity (WHCmax) in comparison to a control moisture regime (CMR) at an average soil moisture of 38 % WHCmax. We then monitored changes in SDZ concentration as well as in the phenotypic phospholipid fatty acid and genotypic 16S rRNA gene fragment patterns of the microbial community after 7, 20, 27, 34, and 49 days of incubation. The results showed that strongly changing water supply made SDZ accessible to mild extraction in the short term. As a result, and despite rather small SDZ effects on community structures, the PLFA-derived microbial biomass was suppressed in the SDZ-contaminated DMR soils relative to the CMR ones, indicating that dynamic moisture changes accelerate the susceptibility of the soil microbial community to antibiotics.

  11. Nitrate leaching in two irrigated soils with different rates of cattle manure.

    PubMed

    Olson, Barry M; Bennett, D Rodney; McKenzie, Ross H; Ormann, Troy D; Atkins, Richard P

    2009-01-01

    Manure applied to irrigated land may potentially contaminate groundwater with NO3-N. An 8-yr field experiment was conducted in southern Alberta, Canada, to determine the effects of different rates of manure on NO3-N accumulation in two irrigated soil types and NO3-N leaching to shallow groundwater. An annual cereal silage was grown at each site and irrigation was based on soil moisture depletion. Treatments included a control, nitrogen fertilizer (NF) at 180 kg N ha(-1) yr(-1), and four rates of cattle (Bos taurus) manure (20, 40, 60, and 120 Mg ha(-1) yr(-1), wet-weight basis). Annual manure applications for 8 yr resulted in NO3-N accumulation in the soil profile at both sites. For every megagram of total N added from manure, NO3-N in the 0- to 1.5-m layer increased by about 50 kg ha(-1) at the coarse-textured (CT) site and by about 100 kg ha(-1) at the medium-textured (MT) site. Silage yield for all of the manure treatments was similar to yield for the NF treatment after the first 3 to 4 yr of annual manure applications. The greatest manure rate and NF treatments significantly increased NO3-N concentrations in groundwater at the CT site. Groundwater NO3-N concentrations were not adversely affected by manure or NF applications at the MT site. An annual cattle manure application rate of 20 Mg ha(-1) provided sufficient N for irrigated cereal silage production and minimized NO3-N leaching in a medium-textured soil.

  12. Transport of manure-borne bacteria and colloids in a stony soil

    NASA Astrophysics Data System (ADS)

    Pachepsky, Y.; Shelton, D.; Sadeghi, A.; Stout, W.

    2003-04-01

    Manure is a source of several microorganisms that can potentially contribute to surface and ground water contamination. As manure dissolves, microorganisms are released along with manure colloids. We hypothesized that transport of manure-borne bacteria in soils can be viewed as the colloid-facilitated transport. To test this hypothesis, we simulated rainfall of 7.1 cm h-1 to the surface of 90 cm-long lysimeters filled with the undisturbed stony soil. Bovine manure mixed from potassium bromide solution was placed on the soil surface, rainfall continued for about five hours after manure application, and effluent collected each 10 min was analyzed for turbidity, bromide-ion, and fecal coliform (FC) content. FC and turbidity had similar breakthrough curves with low dispersion. The convective-dispersive equation with linear adsorption/exclusion and the first-order removal/re-growth terms could be used as a model of the FC transport in soil, whereas the mobile-immobile zone model had to be used for the bromide transport. The average velocity of bacteria and manure colloids was about seven times larger than the average pore water velocity. Porosity available for FC and manure particulate transport was close to the water content in the mobile zone as determined from the bromide breakthrough. The regression line of reduced coliform concentrations on reduced turbidity values was not significantly different from the "one-to-one" line. Average values for the release rate constants were not significantly different for FC and manure colloids. Data of this work support the hypothesis that transport of manure-borne microorganisms has to be studied and mitigated as a colloid-facilitated transport.

  13. Does monensin in chicken manure from poultry farms pose a threat to soil invertebrates?

    PubMed

    Zižek, Suzana; Hrženjak, Rok; Kalcher, Gabrijela Tavčar; Srimpf, Karin; Semrov, Neva; Zidar, Primož

    2011-04-01

    Monensin is a carboxylic polyether ionophore used in the poultry industry as a coccidiostat. It enters the environment via manure from broiler farms. In spite of its potential presence in the environment, information concerning monensin residues in manure and soil and its toxicity to soil organisms are insufficient. In the present study, two beneficial soil invertebrate species, earthworms (Eisenia andrei) and woodlice (Porcellio scaber), were used to assess the toxicity of monensin. Animals were exposed to a range of monensin concentrations via soil or food. Earthworm reproduction was found to be the most susceptible endpoint (NOEC=3.5 mg kg(-1) dry soil; EC(50)=12.7 mg kg(-1) dry soil), while no adverse effects were recorded in isopods (NOEC⩾849mgkg(-1) dry soil, NOEC⩾357mgkg(-1) dry food). The obtained toxicity data were compared with potential concentrations of monensin in soil. In view of this, manure from broiler chickens treated with monensin at a poultry farm was sampled. According to monensin and nitrogen concentrations in the chicken manure and the degradation time of monensin, the predicted environmental concentration (PEC) was calculated. PEC of monensin is around 0.013 mg kg(-1) soil if manure is used after 3 months of composting and 0.05 mg kg(-1) soil if used without storage. Data for earthworm reproduction was used to estimate the predicted no-effect concentration (PNEC). If fresh chicken manure is applied to terrestrial ecosystems, the risk quotient (PEC/PNEC ratio) is above 1, which indicates that monensin might pose an environmental risk under certain conditions. To prevent this, it is strongly recommended to compost chicken manure for several months before using it as fertiliser.

  14. Effects of pH and manure on transport of sulfonamide antibiotics in soil.

    PubMed

    Strauss, Claudia; Harter, Thomas; Radke, Michael

    2011-01-01

    Sulfonamide antibiotics are a commonly used group of compounds in animal husbandry. They are excreted with manure, which is collected in a storage lagoon in certain types of confined animal feeding operations. Flood irrigation of forage fields with this liquid manure creates the potential risk of groundwater contamination in areas with shallow groundwater levels. We tested the hypothesis that-in addition to the soil characteristics-manure as cosolute and manure pH are two major parameters influencing sulfonamide transport in soils. Solute displacement experiments in repacked, saturated soil columns were performed with soil (loamy sand) and manure from a dairy farm in California. Breakthrough of nonreactive tracer and sulfadimethoxine, sulfamethazine, and sulfamethoxazole at different solution pH (5, 6.5, 8.5) with and without manure was modeled using Hydrus-1D to infer transport and reaction parameters. Tracer and sulfonamide breakthrough curves were well explained by a model concept based on physical nonequilibrium transport, equilibrium sorption, and first-order dissipation kinetics. Sorption of the antibiotics was low ( K₄ ≤ 0.7 L kg) and only weakly influenced by pH and manure. However, sulfonamide attenuation was significantly affected by both pH and manure. The mass recovery of sulfonamides decreased with decreasing pH, e.g., for sulfamethoxazole from 77 (pH 8.5) to 56% (pH 5). The sulfonamides were highly mobile under the studied conditions, but manure application increased their attenuation substantially. The observed attenuation was most likely caused by a combination of microbial transformation and irreversible sorption to the soil matrix.

  15. Predicting phosphorus availability from soil-applied composted and non-composted cattle feedlot manure.

    PubMed

    Zvomuya, Francis; Helgason, Bobbi L; Larney, Francis J; Janzen, H Henry; Akinremi, Olalekan O; Olson, Barry M

    2006-01-01

    Prediction of phosphorus (P) availability from soil-applied composts and manure is important for agronomic and environmental reasons. This study utilized chemical properties of eight composted and two non-composted beef cattle (Bos taurus) manures to predict cumulative phosphorus uptake (CPU) during a 363-d controlled environment chamber bioassay. Ten growth cycles of canola (Brassica napus L.) were raised in pots containing 2 kg of a Dark Brown Chernozemic clay loam soil (fine-loamy, mixed, Typic Haploboroll) mixed with 0.04 kg of the amendments. Inorganic P fertilizer (KH2PO4) and an unamended control were included for comparison. All treatments received a nutrient solution containing an adequate supply of all essential nutrients, except P, which was supplied by the amendments. Cumulative P uptake was similar for composted (74 mg kg-1 soil) and non-composted manures (60 mg kg-1 soil) and for the latter and the fertilizer (40 mg kg-1 soil). However, the CPU was significantly higher for organic amendments than the control (24 mg kg-1 soil) and for composted manure than the fertilizer. Apparent phosphorus recovery (APR) from composted manure (24%) was significantly lower than that from non-composted manure (33%), but there was no significant difference in APR between the organic amendments and the fertilizer (27%). Partial least squares (PLS) regression indicated that only two parameters [total water-extractable phosphorus (TPH2O) and total phosphorus (TP) concentration of amendments] were adequate to model amendment-derived cumulative phosphorus uptake (ACPU), explaining 81% of the variation in ACPU. These results suggest that P availability from soil-applied composted and non-composted manures can be adequately predicted from a few simple amendment chemical measurements. Accurate prediction of P availability and plant P recovery may help tailor manure and compost applications to plant needs and minimize the buildup of bioavailable P, which can contribute to

  16. An inventory of trace elements inputs to French agricultural soils.

    PubMed

    Belon, E; Boisson, M; Deportes, I Z; Eglin, T K; Feix, I; Bispo, A O; Galsomies, L; Leblond, S; Guellier, C R

    2012-11-15

    The inputs of ten trace elements (As, Cd, Cu, Cr, Hg, Mo, Ni, Pb, Se, Zn) to French agricultural soils have been assessed. The six main sources considered were: pesticides, mineral fertilizers, animal manure, liming materials, sludge and composts and atmospheric deposition. Data were collected to compute inputs at both national and regional (departmental) scales. The inventory methodology is based on two principles: data are traceable and easy to update. At a national scale, the inventory showed that trace elements inputs can be ranked: Zn≫Cu≫Cr>Pb>Ni>As=Mo>Se>Cd>Hg. Animal manure, mineral fertilizers and pesticides are the predominant sources of TEs. These results are globally in agreement with literature data though atmospheric deposition is shown to be lower than in more industrial countries such as China and United Kingdom where similar surveys were conducted. The inputs of trace elements vary strongly between regions in relation with agricultural activities. This inventory (and the related database) provides basis for developing and monitoring policies to control and reduce trace elements contamination of agricultural soils at both national and regional (departmental) scales.

  17. Mobility and plant availability of risk elements in soil after long-term application of farmyard manure.

    PubMed

    Tlustoš, Pavel; Hejcman, Michal; Hůlka, Martin; Patáková, Michaela; Kunzová, Eva; Száková, Jiřina

    2016-12-01

    Crop rotation long-term field experiments were established in 1955 and 1956 at three locations in the Czech Republic (Čáslav, Ivanovice, and Lukavec) differing in their climatic and soil physicochemical properties. The effect of long-term application of farmyard manure and farmyard manure + NPK treatments on plant-available, easily mobilizable, potentially mobilizable, and pseudo-total contents of arsenic (As), cadmium (Cd), copper (Cu), lead (Pb), and zinc (Zn) contents in soils (in 2013) as well as the uptake of these elements by winter wheat (Triticum aestivum L.) grain and straw were analyzed in the two following seasons: 2012 and 2013. The treatments resulted in increasing the soil pH level when compared to the control, but the cation exchange capacity remained unchanged. Although all fertilizers were applied for six decades, the pseudo-total concentration elements in both the soil and wheat plants stayed far below those of the Czech and European threshold limits for agricultural soils and cereals for human nutrition and feedstuff. Although the mobile pools of As, Cu, and Zn were slightly changed at the treated soils, these changes were not related to the element uptake by the wheat plants. Moreover, the effect of the location and growing season was more decisive for the differences in soil and plant element contents than for the individual treatments. Thus, the long-term application of farmyard manure did not result in any substantial change in risk element contents in both soils and winter wheat plants.

  18. Manure and tillage use in remediation of eroded land and impacts on soil chemical properties

    USDA-ARS?s Scientific Manuscript database

    Soil loss through wind and water erosion is an ongoing problem in semiarid regions. A thin layer of top soil loss over a hectare of cropland could be corresponding to tons of productive soil loss per hectare. The objectives of this study were to evaluate the influence of beef feedlot manure, tilla...

  19. Designing relevant biochars as soil amendments using lignocellulosic-based and manure-based feedstocks

    EPA Science Inventory

    Purpose: Biochars are a soil amendment produced from lignocellulosic and manure feedstocks. Not all biochars are viable soil amendments because of differences in their physical and chemical properties. Biochar could deliver more effective service as a soil amendment if its chemis...

  20. Designing relevant biochars as soil amendments using lignocellulosic-based and manure-based feedstocks

    EPA Science Inventory

    Purpose: Biochars are a soil amendment produced from lignocellulosic and manure feedstocks. Not all biochars are viable soil amendments because of differences in their physical and chemical properties. Biochar could deliver more effective service as a soil amendment if its chemis...

  1. Pig manure application for remediation of mine soils in Murcia Province, SE Spain.

    PubMed

    Faz, A; Carmona, D M; Zanuzzi, A; Mermut, A R

    2008-08-31

    In southern Spain, specifically in Murcia Province, an increased pig population causes large amounts of slurry production that creates a very serious environmental concern. Our aim was to use this waste to reduce the acid mine drainage process, heavy metal mobilization, and to improve soil conditions to enhance plant establishment in mine soils. Pig manure, sewage sludge, and lime were used as soil amendments in a field experiment and in undisturbed soil column. Field experiments showed an increase in pH, total nitrogen, organic carbon, and carbonate contents; a reduction of diethylene-tetramine pentaacetic acid (DTPA)-- and water-extractable metals; and an improvement of plant establishment. The field studies showed that pig manure could be utilized to remediate polluted soils. Column studies in the laboratory showed that amendment of mine soil with pig manure initially increased soil pH from 2.21 to 6.34, promoted reduced conditions in the surface soil, and decreased the metal mobility. After 21 weeks, while the leachate was slightly acidic, however, the mobility of metals was substantially low. Additions of 7 and 14% of pig manure were insufficient to maintain a neutral pH in the leachate. Therefore, continuous application of the pig manure may be advised.

  2. Impact of manure-related DOM on sulfonamide transport in arable soils

    NASA Astrophysics Data System (ADS)

    Zhou, Dan; Thiele-Bruhn, Sören; Arenz-Leufen, Martina Gesine; Jacques, Diederik; Lichtner, Peter; Engelhardt, Irina

    2016-09-01

    Field application of livestock manure introduces colloids and veterinary antibiotics, e.g. sulfonamides (SAs), into farmland. The presence of manure colloids may potentially intensify the SAs-pollution to soils and groundwater by colloid-facilitated transport. Transport of three SAs, sulfadiazine (SDZ), sulfamethoxypyridazine (SMPD), and sulfamoxole (SMOX), was investigated in saturated soil columns with and without manure colloids from sows and farrows, weaners, and fattening pigs. Experimental results showed that colloid-facilitated transport of SMOX was significant in the presence of manure colloids from fattening pigs with low C/N ratio, high SUVA280 nm and protein C, while manure colloids from sows and farrows and weaners had little effect on SMOX transport. In contrast, only retardation was observed for SDZ and SMPD when manure colloids were present. Breakthrough curves (BTCs) of colloids and SAs were replicated well by a newly developed numerical model that considers colloid-filtration theory, competitive kinetic sorption, and co-transport processes. Model results demonstrate that mobile colloids act as carriers for SMOX, while immobile colloids block SMOX from sorbing onto the soil. The low affinity of SMOX to sorb on immobile colloids prevents aggregation and also promotes SMOX's colloid-facilitated transport. Conversely, the high affinity of SDZ and SMPD to sorb on all types of immobile colloids retarded their transport. Thus, manure properties play a fundamental role in increasing the leaching risk of hydrophobic sulfonamides.

  3. Chlortetracycline and tylosin runoff from soils treated with antimicrobial containing manure.

    PubMed

    Hoese, A; Clay, S A; Clay, D E; Oswald, J; Trooien, T; Thaler, R; Carlson, C G

    2009-05-01

    This study assessed the runoff potential of tylosin and chlortetracycline (CTC) from soils treated with manure from swine fed rations containing the highest labeled rate of each chemical. Slurry manures from the swine contained either CTC at 108 microg/g or tylosin at 0.3 microg/g. These manures were surface applied to clay loam, silty clay loam, and silt loam soils at a rate of 0.22 Mg/ha. In one trial, tylosin was applied directly to the soil surface to examine runoff potential of water and chemical when manure was not present. Water was applied using a sprinkler infiltrometer 24-hr after manure application with runoff collected incrementally every 5 min for about 45 min. A biofilm crust formed on all manure-treated surfaces and infiltration was impeded with > 70% of the applied water collected as runoff. The total amount of CTC collected ranged from 0.9 to 3.5% of the amount applied whereas tylosin ranged from 8.4 to 12%. These data indicate that if surface-applied manure contains antimicrobials, runoff could lead to offsite contamination.

  4. Hardwood biochar and manure co-application to a calcareous soil.

    PubMed

    Ippolito, J A; Stromberger, M E; Lentz, R D; Dungan, R S

    2016-01-01

    Biochar may affect the mineralization rate of labile organic C sources such as manures via microbial community shifts, and subsequently affect nutrient release. In order to ascertain the positive or negative priming effect of biochar on manure, dairy manure (2% by wt.) and a hardwood-based, fast pyrolysis biochar were applied (0%, 1%, 2%, and 10% by wt.) to a calcareous soil. Destructive sampling occurred at 1, 2, 3, 4, 6 and 12 months to monitor for changes in soil chemistry, water content, microbial respiration, bacterial populations, and microbial community structure. Overall results showed that increasing biochar application rate improved the soil water content, which may be beneficial in limited irrigation or rainfall areas. Biochar application increased soil organic C content and plant-available Fe and Mn, while a synergistic biochar-manure effect increased plant-available Zn. Compared to the other rates, the 10% biochar application lowered concentrations of NO3-N; effects appeared masked at lower biochar rates due to manure application. Over time, soil NO3-N increased likely due to manure N mineralization, yet soil NO3-N in the 10% biochar rate remained lower as compared to other treatments. In the presence of manure, only the 10% biochar application caused subtle microbial community structure shifts by increasing the relative amounts of two fatty acids associated with Gram-negative bacteria and decreasing Gram-positive bacterial fatty acids, each by ∼1%. Our previous findings with biochar alone suggested an overall negative priming effect with increasing biochar application rates, yet when co-applied with manure the negative priming effect was eliminated. Published by Elsevier Ltd.

  5. Nutrient leaching and soil retention in mined land reclaimed with stabilized manure.

    PubMed

    Dere, Ashlee L; Stehouwer, Richard C; Aboukila, Emad; McDonald, Kirsten E

    2012-01-01

    Two environmental problems in Pennsylvania are degraded mined lands and excess manure nutrients from intensive animal production. Manure could be used in mine reclamation, but the large application rates required for sustained biomass production could result in significant nutrient discharge. An abandoned mine site in Schuylkill County, Pennsylvania, was used to test manure nutrient stabilization by composting and by mixing with primary paper mill sludge (PMS). Reclamation treatments were lime and fertilizer, composted poultry manure (78 and 156 Mg ha), and poultry manure (50 Mg ha) mixed with PMS (103 and 184 Mg ha) to achieve C-to-N ratios of 20 and 29. Leachates were collected with zero-tension lysimeters, and during 3 yr following amendment application, <1% of added N leached from the compost treatments. The manure+PMS C:N 29 treatment leached more N than any other treatment (393 kg N ha during 3 yr, 12.4 times more N than compost treatments), mostly as pulses of NO in the first two fall seasons following reclamation. The manure+PMS C:N 20 treatment leached 107 kg N ha during 3 yr. Three years after amendment application, most of the N and P added with the manure-based amendments was retained in the mine soil even though net immobilization of N by PMS appeared to be limited to 3 mo following application. Composting or mixing PMS with manure to achieve a C-to-N ratio of 20 can effectively minimize N leaching, retain added N in mine soil, and provide greater improvement in soil quality than lime and fertilizer amendment. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  6. Cattle Manure Enhances Methanogens Diversity and Methane Emissions Compared to Swine Manure under Rice Paddy.

    PubMed

    Kim, Sang Yoon; Pramanik, Prabhat; Bodelier, Paul L E; Kim, Pil Joo

    2014-01-01

    Livestock manures are broadly used in agriculture to improve soil quality. However, manure application can increase the availability of organic carbon, thereby facilitating methane (CH4) production. Cattle and swine manures are expected to have different CH4 emission characteristics in rice paddy soil due to the inherent differences in composition as a result of contrasting diets and digestive physiology between the two livestock types. To compare the effect of ruminant and non-ruminant animal manure applications on CH4 emissions and methanogenic archaeal diversity during rice cultivation (June to September, 2009), fresh cattle and swine manures were applied into experimental pots at 0, 20 and 40 Mg fresh weight (FW) ha-1 in a greenhouse. Applications of manures significantly enhanced total CH4 emissions as compared to chemical fertilization, with cattle manure leading to higher emissions than swine manure. Total organic C contents in cattle (466 g kg-1) and swine (460 g kg-1) manures were of comparable results. Soil organic C (SOC) contents were also similar between the two manure treatments, but dissolved organic C (DOC) was significantly higher in cattle than swine manure. The mcrA gene copy numbers were significantly higher in cattle than swine manure. Diverse groups of methanogens which belong to Methanomicrobiaceae were detected only in cattle-manured but not in swine-manured soil. Methanogens were transferred from cattle manure to rice paddy soils through fresh excrement. In conclusion, cattle manure application can significantly increase CH4 emissions in rice paddy soil during cultivation, and its pretreatment to suppress methanogenic activity without decreasing rice productivity should be considered.

  7. Cattle Manure Enhances Methanogens Diversity and Methane Emissions Compared to Swine Manure under Rice Paddy

    PubMed Central

    Kim, Sang Yoon; Pramanik, Prabhat; Bodelier, Paul L. E.; Kim, Pil Joo

    2014-01-01

    Livestock manures are broadly used in agriculture to improve soil quality. However, manure application can increase the availability of organic carbon, thereby facilitating methane (CH4) production. Cattle and swine manures are expected to have different CH4 emission characteristics in rice paddy soil due to the inherent differences in composition as a result of contrasting diets and digestive physiology between the two livestock types. To compare the effect of ruminant and non-ruminant animal manure applications on CH4 emissions and methanogenic archaeal diversity during rice cultivation (June to September, 2009), fresh cattle and swine manures were applied into experimental pots at 0, 20 and 40 Mg fresh weight (FW) ha−1 in a greenhouse. Applications of manures significantly enhanced total CH4 emissions as compared to chemical fertilization, with cattle manure leading to higher emissions than swine manure. Total organic C contents in cattle (466 g kg−1) and swine (460 g kg−1) manures were of comparable results. Soil organic C (SOC) contents were also similar between the two manure treatments, but dissolved organic C (DOC) was significantly higher in cattle than swine manure. The mcrA gene copy numbers were significantly higher in cattle than swine manure. Diverse groups of methanogens which belong to Methanomicrobiaceae were detected only in cattle-manured but not in swine-manured soil. Methanogens were transferred from cattle manure to rice paddy soils through fresh excrement. In conclusion, cattle manure application can significantly increase CH4 emissions in rice paddy soil during cultivation, and its pretreatment to suppress methanogenic activity without decreasing rice productivity should be considered. PMID:25494364

  8. Leachate water quality of soils amended with different swine manure-based amendments.

    PubMed

    Ro, K S; Novak, J M; Johnson, M G; Szogi, A A; Libra, J A; Spokas, K A; Bae, S

    2016-01-01

    In the face of the rising level of manure production from concentrated animal feeding operations (CAFOs), management options are being sought that can provide nutrient recycling for plant growth and improved soil conditions with minimal environmental impacts. Alternatives to direct manure application are composting and thermochemical conversion which can destroy pathogens and improve handling and storage. The effect of four forms of swine manure-based soil amendments (raw, compost, hydrochar, and pyrochar) on soil fertility and leachate water quality characteristics of a sandy soil were investigated in soil incubation experiments. All four amendments significantly increased soil carbon, cation exchange capacity and available nutrient contents of the soil. However, hydrochar amended soil leached lower amounts of N, P, and K compared to the other amendments including the control. On the other hand, pyrochar amended soil leached higher concentrations of P and K. Subsequent tests on the hydrochar for K and N adsorption isotherms and surface analysis via XPS suggested that these nutrients were not sorbed directly to the hydrochar surface. Although it is still not clear how these nutrients were retained in the soil amended with hydrochar, it suggests a great potential for hydrochar as an alternative manure management option as the hydrochar can be soil applied while minimizing potential environmental issues from the leaching of high nutrient concentrations to water bodies.

  9. Phosphorus distribution in a soil fertilized with recovered manure phosphates

    USDA-ARS?s Scientific Manuscript database

    Phosphorus (P) can be recovered in a concentrated form from livestock manure and poultry litter. A greenhouse study was conducted to evaluate the short-term leaching potential and plant availability of P from recovered P materials from liquid pig manure (SRP) and broiler litter (LRP) in a characteri...

  10. Fate of Escherichia coli O157: H7 in agricultural soils amended with different organic fertilizers.

    PubMed

    Yao, Zhiyuan; Yang, Li; Wang, Haizhen; Wu, Jianjun; Xu, Jianming

    2015-10-15

    Five organic fertilizers (vermicompost, pig manure, chicken manure, peat and oil residue) were applied to agricultural soils to study their effects on the survival of Escherichia coli O157:H7 (E. coli O157:H7). Results showed that E. coli O157:H7 survival changed greatly after organic fertilizers application, with shorter td values (survival time needed to reach the detection limit of 100 CFU g(-1)) (12.57±6.57 days) in soils amended with chicken manure and the longest (25.65±7.12 days) in soils amended with pig manure. Soil pH, EC and free Fe/Al (hydro) oxides were significant explanatory factors for E. coli O157:H7 survival in the original soils. Soil constituents (minerals and organic matter) and changes in their surface charges with pH increased the effect of soil pH on E. coli O157:H7 survival. However, electrical conductivity played a more important role in regulating E. coli O157:H7 survival in fertilizer-amended soils. This study highlighted the importance of choosing appropriate organic fertilizers in the preharvest environment to reduce food-borne bacterial contamination.

  11. Animal manure application and soil organic carbon stocks: a meta-analysis.

    PubMed

    Maillard, Émilie; Angers, Denis A

    2014-02-01

    The impact of animal manure application on soil organic carbon (SOC) stock changes is of interest for both agronomic and environmental purposes. There is a specific need to quantify SOC change for use in national greenhouse gas (GHG) emission inventories. We quantified the response of SOC stocks to manure application from a large worldwide pool of individual studies and determined the impact of explanatory factors such as climate, soil properties, land use and manure characteristics. Our study is based on a meta-analysis of 42 research articles totaling 49 sites and 130 observations in the world. A dominant effect of cumulative manure-C input on SOC response was observed as this factor explained at least 53% of the variability in SOC stock differences compared to mineral fertilized or unfertilized reference treatments. However, the effects of other determining factors were not evident from our data set. From the linear regression relating cumulative C inputs and SOC stock difference, a global manure-C retention coefficient of 12% ± 4 (95% Confidence Interval, CI) could be estimated for an average study duration of 18 years. Following an approach comparable to the Intergovernmental Panel on Climate Change, we estimated a relative SOC change factor of 1.26 ± 0.14 (95% CI) which was also related to cumulative manure-C input. Our results offer some scope for the refinement of manure retention coefficients used in crop management guidelines and for the improvement of SOC change factors for national GHG inventories by taking into account manure-C input. Finally, this study emphasizes the need to further document the long-term impact of manure characteristics such as animal species, especially pig and poultry, and manure management systems, in particular liquid vs. solid storage.

  12. Phosphorus Leaching in Soils Amended with Animal Manures Generated from Modified Diets.

    PubMed

    Toor, Gurpal S; Sims, J Thomas

    2016-07-01

    New dietary modifications for dairy (reducing P content in feed) and poultry (addition of feed additives such as phytase) aim to reduce P excretion in manures. Our objective was to investigate if dietary changes were effective at reducing P leaching loss on land application of manures. We used 54 undisturbed lysimeters (30 cm diameter, 50 cm deep) collected from three typical mid-Atlantic soils. Lysimeters received 85 kg total P ha from fertilizer (superphosphate), dairy manures generated from low- or high-P diets, or broiler litters generated from normal diet or reduced P- and phytase-amended diets. Lysimeters were irrigated with 50 mm of water each week for 9 wk. The major forms of P in the leachate were dissolved (dissolved unreactive > dissolved reactive P [DRP]) rather than particulate (total particulate P). The higher P solubility (100%) in superphosphate resulted in greater leaching of DRP, whereas the lower P solubility (<30%) in dairy manures or broiler litters resulted in lower DRP leaching from soils. Preferential flow in two soils caused greater DRP leaching; this effect was more pronounced in the superphosphate-amended than in the manure/litter-amended lysimeters. The dairy and poultry dietary modification was effective at reducing the amount of P in manures and litters. However, the application of treatments at similar P rate (85 kg ha) resulted in the addition of a higher amount of manure (54-66%) in lysimeters that received low-P dairy manure-amended and phytase-amended broiler litter, which then controlled P leaching from soils. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  13. Carbon and nitrogen stocks and nitrogen mineralization in organically managed soils amended with composted manures.

    PubMed

    Romanyà, Joan; Arco, Noèlia; Solà-Morales, Ignasi; Armengot, Laura; Sans, Francesc Xavier

    2012-01-01

    The use of composted manures and of legumes in crop rotations may control the quality and quantity of soil organic matter and may affect nutrient retention and recycling. We studied soil organic C and N stocks and N mineralization in organically and conventionally managed dryland arable soils. We selected 13 extensive organic fields managed organically for 10 yr or more as well as adjacent fields managed conventionally. Organic farmers applied composted manures ranging from 0 to 1380 kg C ha yr and incorporated legumes in crop rotations. In contrast, conventional farmers applied fresh manures combined with slurries and/or mineral fertilizers ranging from 200 to 1900 kg C ha yr and practiced a cereal monoculture. Despite the fact that the application of organic C was similar in both farming systems, organically managed soils showed higher C and similar N content and lower bulk density than conventionally managed soils. Moreover, organic C stocks responded to the inputs of organic C in manures and to the presence of legumes only in organically managed soils. In contrast, stocks of organic N increased with the inputs of N or C in both farming systems. In organically managed soils, organic N stocks were less mineralizable than in conventional soils. However, N mineralization in organic soils was sensitive to the N fixation rates of legumes and to application rate and C/N ratio of the organic fertilizers. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  14. Responses of plasmid-mediated quinolone resistance genes and bacterial taxa to (fluoro)quinolones-containing manure in arable soil.

    PubMed

    Xiong, Wenguang; Sun, Yongxue; Ding, Xueyao; Zhang, Yiming; Zhong, Xiaoxia; Liang, Wenfei; Zeng, Zhenling

    2015-01-01

    The aim of the present study was to investigate the fate of plasmid-mediated quinolone resistance (PMQR) genes and the disturbance of soil bacterial communities posed by (fluoro)quinolones (FQNs)-containing manure in arable soil. Representative FQNs (enrofloxacin (ENR), ciprofloxacin (CIP) and norfloxacin (NOR)), PMQR genes (qepA, oqxA, oqxB, aac(6')-Ib-cr and qnrS) and bacterial communities in untreated soil, +manure and +manure+FQNs groups were analyzed using culture independent methods. The significantly higher abundance of oqxA, oqxB and aac(6')-Ib-cr, and significantly higher abundance of qnrS in +manure group than those in untreated soil disappeared at day 30 and day 60, respectively. All PMQR genes (oqxA, oqxB, aac(6')-Ib-cr and qnrS) dissipated 1.5-1.7 times faster in +manure group than those in +manure+FQNs group. The disturbance of soil bacterial communities posed by FQNs-containing manure was also found. The results indicated that significant effects of PMQR genes (oqxA, oqxB, aac(6')-Ib and qnrS) on arable soils introduced by manure disappeared 2 month after manure application. FQNs introduced by manure slowed down the dissipation of PMQR genes. The presence of high FQNs provided a selective advantage for species affiliated to the phylum including Acidobacteria, Verrucomicrobia and Planctomycetes while suppressing Proteobacteria and Actinobacteria.

  15. Rainfall Driven Sorting of Soils and Manure in Beef Feedlot Pens, Implications for Steroid Hormone Transport

    NASA Astrophysics Data System (ADS)

    Bryson, R.; Harter, T.

    2009-12-01

    Previous research has documented elevated estrogenic and androgenic activity in surface waters receiving cattle feedlot effluent, while current research shows that significant concentrations of hydrophobic steroid hormones are transported in the solid phase of feedlot pen surface runoff. Accumulated manure in beef feedlot pens includes organic matter ranging from colloidal particles to partially digested feed, forming a complex soil-manure conglomerate at the pen surface. We hypothesized that the transport of solid phase particles in rainfall runoff on beef feedlots would be influenced but not limited by shield layer development. Soils and manure at a beef feedlot were evaluated before and after rainfall-runoff events to determine changes in soil composition and structure. Runoff samples were also collected during an hour of runoff and analyzed for suspended solids. Results indicate that rainfall actively sorts the soil and manure components through raindrop impact, depression storage and runoff. However, transport of solid phase constituents was found to be elevated throughout the hydrograph. This suggests that the surface shield layer conceptualization applied to other soils should be modified before application to the soil-manure conglomerate found in beef feedlot pens.

  16. Humus status of soddy-podzolic soil upon application of different green manures

    NASA Astrophysics Data System (ADS)

    Tripol'Skaya, L. N.; Romanovskaya, D. K.; Shlepetiene, A.

    2008-08-01

    Results of studying the effect of different plant species on the humus status of loamy sandy soddy-podzolic soil were generalized. It was found that the application of different green manure species ( Lupinus luteus L., Trifolium pratense L., and Raphanus sativus L.) and straw from cereal crops ( Secale cereale, Hordeum L.) under percolative conditions helped to sustain a stable humus budget in grain agrophytocenoses. A significant change in the fractional composition of HAs and FAs occurred under the effect of green manure. The fractions of free HAs and those bound to clay minerals accumulated with the application of Trifolium pratense and Raphanus sativus biomass and cereal straw. Lower amounts of aggressive and free FAs were formed in the soil with the application of straw and fallow plants. The decomposition of green manure and the formation of humic substances also depended on the hydrothermal conditions during application of manure.

  17. Searsville Sediment Experiment: What is the ideal agricultural soil?

    NASA Astrophysics Data System (ADS)

    Leal, J.; Lo, D.; Patel, N.; Gu, S.

    2014-12-01

    The purpose of this experiment is to decide whether or not the sediment located within Searsville Dam at the Jasper Ridge Biological Preserve is well suited for agricultural soil. By utilizing various combinations of sediment, farm soil, compost, and horse manure to grow basil plants, we underwent an exploratory study in order to better understand what type of materials and nutrients plants can best thrive within. Our general experiment protocol includes watering the crops with irrigation every day while young, and then limiting that water exposure to only Mondays, Wednesdays, and Fridays as they become more established. The basil is growing in pots filled with the different amounts of material, and are arranged randomly to prevent certain plants from getting more sunlight than others. The whole experiment plot is covered with a thin white fabric and secured with bricks and wood to keep out pests in the garden. In order to observe trends in the basil development, plant height and leaf number is recorded once every week. During the third week of the study we performed soil texture tests, and within the fourth week we calculated pH data. We discovered that the sediment our project focuses upon is 10-18% clay and 50% sand which categorizes it as loam, and the Stanford farm soil that serves as our control group contains 20-26% clay and 30% sand so it is a silt loam material. The pH tests also showed an average of 7.45 for sediment, 7.3 for farm soil, 7.85 for compost, and 7.65 for horse manure. By looking at all of the data recorded over the five-week time period, we have so far noticed that the 50% sediment and 50% horse manure combination consistently has the best height increase as well as leaf size and content. The 50% sediment and 50% compost mixture has also performed well in those terms, and is therefore a possibility for the best agricultural soil. However, future lab work conducted by Stanford students to examine the nutrient content of the basil tissue, along

  18. Inherent agricultural constraints in Allegheny Plateau soils

    USDA-ARS?s Scientific Manuscript database

    World population increases demand increased agricultural production. This can be accomplished through improved cultivars and production techniques or increased use of previously marginal agricultural regions. In the Allegheny Plateau (AP) region of the Appalachian Mountains, acid soils with toxic ...

  19. Fate and Transport of Agricultural Nutrients in Macro-porous Soils

    NASA Astrophysics Data System (ADS)

    Royem, A. A.; Walter, M. T.

    2010-12-01

    The major objective of this study is to address water quality problems associated with application of liquid manure to subsurface-drained agricultural lands. There are over 600 large and medium sized confined animal feeding operations (CAFOs) in New York, most of which utilize land application to manage this waste stream. Due to the regions shallow soil and humid weather, most fields have been equipped with tile drainage. The concern is that handling the manure is a liquefied state may enhance the likelihood of contamination of the tile drainage discharge and its potential impacts on downstream water quality. Laboratory studies were used to investigate how manure liquidity (percent solids) affects the transport of manure constituents through varying macropore sizes in the soil. Soil columns of 3 different macropore sizes (0, 1, 3 millimeter) were constructed, subjected to simulated rainfall over several weeks, and effluent was collected from both the soil matrix and macropores separately. Effluent samples were analyzed for soluble reactive phosphorus (SRP). As expected, the preliminary results show enhanced SRP transport through macropores with decreasing percent solids (i.e., more liquidy manure). The implications at field and watershed scales are still being investigated.

  20. Effects of liquid swine manure on dissipation of 17β-estradiol in soil.

    PubMed

    Zitnick, K K; Shappell, N W; Hakk, H; DeSutter, T M; Khan, E; Casey, F X M

    2011-02-28

    17β-estradiol (E2), a natural estrogenic hormone, degrades within hours and bind strongly to soils and sediments; however, estrogens are frequently detected in the environment at concentrations that impact water quality. Colloidal (COC) and dissolved (DOC) organic carbon may enhance the persistence and mobility of E2. Soil batch experiments were used to identify the persistence and sorption of radiolabeled E2 dissolved in solutions of (i) COC/DOC derived from liquid swine manure and (ii) CaCl(2). Estradiol disappeared from the aqueous phase before 7 d in the CaCl(2) solution, yet persisted throughout the duration of the 14 d experiment in the liquid manure solution. There was also concomitant formation of estrone (E1; a metabolite of E2) as E2 dissipated in sterile batch experiments, which was attributed to abiotic oxidation. The liquid manure solution appeared to interact with the estrogen and/or oxidation reaction sites, reducing E2 degradation. Furthermore, the liquid manure solution reduced E2/E1 binding to the soil surface resulting in more E2/E1 in the aqueous layer compared to the CaCl(2) solution. Ultrafiltration results of liquid manure indicated that ∼1/3 of E2 was associated with COC, which may be responsible for the reduced degradation and sorption of E2 in the liquid manure solution.

  1. Effects of long-term cattle manure application on soil properties and soil heavy metals in corn seed production in Northwest China.

    PubMed

    Zhao, Yunchen; Yan, Zhibin; Qin, Jiahai; Xiao, Zhanwen

    2014-06-01

    To evaluate the effects of manure application on continuous maize seed production, 10-year cattle manure on soil properties, heavy metal in soil and plant were evaluated and investigated in calcareous soil. Results showed that manure application increased soil organic matter, total and available nutrients, pH, and electrical conductivity (EC), and the most massive rate caused the highest increase. Manure application led to an increase in exchangeable fraction and an increase of availability of heavy metal. Residual fraction was dominant among all metals, followed by the fraction bound to Fe and Mn oxides. Manure application involved accumulation of heavy metal on corn, but the accumulation in the stem is higher than that in the seed. Manure application led to a high deficiency of total Zn and high accumulation of total Cd in the soil of corn seed production, which should be a risk for safety seed production in calcareous soil in Northwest China.

  2. Effect of poultry diet on phosphorus in runoff from soils amended with poultry manure and compost.

    PubMed

    Vadas, P A; Meisinger, J J; Sikora, L J; McMurtry, J P; Sefton, A E

    2004-01-01

    Phosphorus in runoff from fields where poultry litter is surface-applied is an environmental concern. We investigated the effect of adding phytase and reducing supplemental P in poultry diets and composting poultry manures, with and without Fe and Al amendments, on P in manures, composts, and runoff. We used four diets: normal (no phytase) with 0.4% supplemental P, normal + phytase, phytase + 0.3% P, and phytase + 0.2% P. Adding phytase and decreasing supplemental P in diets reduced total P but increased water-extractable P in manure. Compared with manures, composting reduced both total P, due to dilution of manure with woodchips and straw, and water-extractable P, but beyond a dilution effect so that the ratio of water-extractable P to total P was less in compost than manure. Adding Fe and Al during composting did not consistently change total P or water-extractable P. Manures and composts were surface-applied to soil boxes at a rate of 50 kg total P ha(-1) and subjected to simulated rainfall, with runoff collected for 30 min. For manures, phytase and decreased P in diets had no significant effect on total P or molybdate-reactive P loads (kg ha(-1)) in runoff. Composting reduced total P and molybdate-reactive P loads in runoff, and adding Fe and Al to compost reduced total P but not molybdate-reactive P loads in runoff. Molybdate-reactive P in runoff (mg box(-1)) was well correlated to water-extractable P applied to boxes (mg box(-1)) in manures and composts. Therefore, the final environmental impact of dietary phytase will depend on the management of poultry diets, manure, and farm-scale P balances.

  3. Nutrient losses from fall- and winter-applied manure: effects of timing and soil temperature

    USDA-ARS?s Scientific Manuscript database

    Soil temperature is a major environmental factor that affects meltwater and precipitation infiltration and nutrient cycling. The objective of this study was to determine nutrient losses in runoff and leachate from fall- and winter-applied dairy manure as affected by soil temperature at the time of a...

  4. Soil organic carbon and nitrogen in long-term manure management system

    USDA-ARS?s Scientific Manuscript database

    Long-term studies are extremely beneficial to understand and evaluate changes in soil quality and sustainability of specific management practices. The objectives of this study were to evaluate the effects of 70 yr of moldboard plowing with manure (M) and commercial fertilizer (F) additions on soil o...

  5. Contrasting effects of biochar versus manure on soil microbial communities and enzyme activities in an Aridisol

    USDA-ARS?s Scientific Manuscript database

    Biochar has been shown to increase microbial activity, alter microbial community structure, and increase soil fertility in arid and semi-arid soils, but at relatively high rates that may be impractical for large-scale field studies. This contrasts with organic amendments such as manure, which can be...

  6. Nutrient losses from Fall and Winter-applied manure: Effects of timing and soil temperature

    USDA-ARS?s Scientific Manuscript database

    Soil temperature is a major environmental factor that affects both the infiltration of meltwater and precipitation, and nutrient cycling. The objectives of this study were to determine nutrient losses in runoff and leachate from fall and winter-applied dairy manure based on the soil temperature at t...

  7. Importance of soil amendments: survival of bacterial pathogens in manure and compost used as organic fertizliers

    USDA-ARS?s Scientific Manuscript database

    Biological soil amendments (BSA’s) like manure and compost are frequently used as organic fertilizers to soils to improve its physical and chemical properties. However, BSAs have been known to be a reservoir for enteric bacterial pathogens like enterohemorrhagic E. coli, Salmonella spp, and Listeri...

  8. Effects of poultry manure on soil biochemical properties in phthalic acid esters contaminated soil.

    PubMed

    Gao, Jun; Qin, Xiaojian; Ren, Xuqin; Zhou, Haifeng

    2015-12-01

    This study aimed to evaluate the effects of poultry manure (PM) on soil biological properties in DBP- and DEHP-contaminated soils. An indoor incubation experiment was conducted. Soil microbial biomass C (Cmic), soil enzymatic activities, and microbial phospholipid fatty acid (PLFA) concentrations were measured during incubation period. The results indicated that except alkaline phosphatase activity, DBP and DEHP had negative effects on Cmic, dehydrogenase, urease, protease activities, and contents of total PLFA. However, 5 % PM treatment alleviated the negative effects of PAEs on the above biochemical parameters. In DBP-contaminated soil, 5 % PM amendment even resulted in dehydroenase activity and Cmic content increasing by 17.8 and 11.8 % on the day 15 of incubation, respectively. During the incubation periods, the total PLFA contents decreased maximumly by 17.2 and 11.6 % in DBP- and DEHP-contaminated soils without PM amendments, respectively. Compared with those in uncontaminated soil, the total PLFA contents increased slightly and the value of bacPLFA/fugalPLFA increased significantly in PAE-contaminated soils with 5 % PM amendment. Nevertheless, in both contaminated soils, the effects of 5 % PM amendment on the biochemical parameters were not observed with 10 % PM amendment. In 10 % PM-amended soils, DBP and DEHP had little effect on Cmic, soil enzymatic activities, and microbial community composition. At the end of incubation, the effects of PAEs on these parameters disappeared, irrespective of PM amendment. The application of PM ameliorated the negative effect of PAEs on soil biological environment. However, further work is needed to study the effect of PM on soil microbial gene expression in order to explain the change mechanisms of soil biological properties.

  9. Antibiotic losses in leaching and surface runoff from manure-amended agricultural land.

    PubMed

    Dolliver, Holly; Gupta, Satish

    2008-01-01

    A 3-yr field study quantified leaching and runoff losses of antibiotics from land application of liquid hog (chlortetracycline and tylosin) and solid beef (chlortetracycline, monensin, and tylosin) manures under chisel plowing and no-tillage systems. The study was conducted in southwestern Wisconsin, a karst area with steep, shallow, macroporous soils. Relative mass losses of chlortetracycline, monensin, and tylosin were <5% of the total amount applied with manure. Chlortetracycline was only detected in runoff, whereas monensin and tylosin were detected in leachate and runoff. Highest concentrations of monensin and tylosin in the leachate were 40.9 and 1.2 microg L(-1), respectively. Highest chlortetracycline, monensin, and tylosin concentrations in runoff were 0.5, 57.5, and 6.0 microg L(-1), respectively. For all three antibiotics, >90% of detections and 99% of losses occurred during the non-growing season due to fall manure application and slow degradation of antibiotics at cold temperatures. During years of high snowmelt, runoff accounted for nearly 100% of antibiotic losses, whereas during years of minimal snowmelt, runoff accounted for approximately 40% of antibiotic losses. Antibiotic losses were generally higher from the no-tillage compared with chisel plow treatment due to greater water percolation as a result of macroporosity and greater runoff due to lack of surface roughness in the no-tillage plots during the non-growing season. The results from this study suggest that small quantities of dissolved antibiotics could potentially reach surface and ground waters in the Upper Midwestern USA from manure-amended shallow macroporous soils underlain with fractured bedrock.

  10. Growth of Cymbopogon citratus and Vetiveria zizanioides on Cu mine tailings amended with chicken manure and manure-soil mixtures: a pot scale study.

    PubMed

    Das, Manab; Maiti, Subodh Kumar

    2009-01-01

    The Rakha Cu mines are located at East Singhbhum, Jharkhand, India and their activities ceased in 2001. The tailings (residue) were permanently stored in tailings ponds that require vegetation to reduce their impact on the environment. A pot scale study was conducted to evaluate the suitability of Cymbopogon citratus (DC.) Ex Nees and Vetiveria zizanioides (L) Nash for the reclamation of Cu tailings and to evaluate the effects of chicken manure and soil-manure mixtures on the revegetation of such tailings. Application of manure and soil-manure mixtures resulted in significant increase in pH, EC, OC, CEC and nutritional status of Cu tailings. The environmentally available and DTPA extractable Cu and Ni concentration reduced in amended tailings, while Mn and Zn content increased significantly. Plants grown on amended tailings accumulated lesser Cu and Ni but higher Mn and Zn. Plant biomass increased proportionally to manure and soil-manure mixtures application rates. Lemon grass produced more biomass than vetiver grass in either of the amended tailings. From the pot experiment, it can be suggested that application of chicken manure @ 5% (w/w) and in combination with lemon grass, could be a viable option for reclamation (phytostabilization) of toxic tailings.

  11. Mild electrokinetic treatment of cadmium-polluted manure for improved applicability in greenhouse soil.

    PubMed

    Huang, Bin; Chi, Guangyu; Chen, Xin; Shi, Yi

    2017-09-07

    Applications of cadmium (Cd) and salinity-containing manures contribute to Cd pollution and salinization in greenhouse soils. In this study, chicken manure polluted with Cd (5.6 mg/kg) was mildly electrokinetically treated (0.25 V/cm) for 48 h with intermittent replacement of catholyte with 20 mM acetic acid solution to remove Cd and salinity for application without need of post-treatment in greenhouse soil. The electrokinetic treatment created pH conditions mainly ranging from 5.0 to 8.0 within the manure for minimizing re-precipitation of desorbed Cd and evaporative loss of ammonium. However, without manure pre-acidification, electrokinetic treatment resulted in negligible removal of total Cd but 61.7% of increase in the small fraction of exchangeable Cd, due to poor desorption but enhanced formation of exchangeable Cd. In contrast, manure pre-acidification with 20 mM acetic acid favored Cd desorption, leading to electrokinetic removal of exchangeable, carbonate-bound, and total Cd by 32.2%, 34.5%, and 14.5%, respectively. Mild electrokinetic treatment of manure with and without pre-acidification resulted in similar removal of salinity (72.3% and 68.0%), similar pH condition (7.2 and 7.4), and basically same evaporative loss of ammonium (14.6% and 14.2%). Overall, the mild electrokinetic treatment considerably lowered the risk of Cd and the salinity from the pre-acidified manure for improved applicability in greenhouse soil, and more studies are needed to enhance the performance of electrokinetic Cd removal from manure.

  12. Persistence and leaching potential of microorganisms and mineral N in animal manure applied to intact soil columns.

    PubMed

    Amin, M G Mostofa; Forslund, Anita; Bui, Xuan Thanh; Juhler, René K; Petersen, Søren O; Lægdsmand, Mette

    2013-01-01

    Pathogens may reach agricultural soils through application of animal manure and thereby pose a risk of contaminating crops as well as surface and groundwater. Treatment and handling of manure for improved nutrient and odor management may also influence the amount and fate of manure-borne pathogens in the soil. A study was conducted to investigate the leaching potentials of a phage (Salmonella enterica serovar Typhimurium bacteriophage 28B) and two bacteria, Escherichia coli and Enterococcus species, in a liquid fraction of raw pig slurry obtained by solid-liquid separation of this slurry and in this liquid fraction after ozonation, when applied to intact soil columns by subsurface injection. We also compared leaching potentials of surface-applied and subsurface-injected raw slurry. The columns were exposed to irrigation events (3.5-h period at 10 mm h(-1)) after 1, 2, 3, and 4 weeks of incubation with collection of leachate. By the end of incubation, the distribution and survival of microorganisms in the soil of each treatment and in nonirrigated columns with injected raw slurry or liquid fraction were determined. E. coli in the leachates was quantified by both plate counts and quantitative PCR (qPCR) to assess the proportions of culturable and nonculturable (viable and nonviable) cells. Solid-liquid separation of slurry increased the redistribution in soil of contaminants in the liquid fraction compared to raw slurry, and the percent recovery of E. coli and Enterococcus species was higher for the liquid fraction than for raw slurry after the four leaching events. The liquid fraction also resulted in more leaching of all contaminants except Enterococcus species than did raw slurry. Ozonation reduced E. coli leaching only. Injection enhanced the leaching potential of the microorganisms investigated compared to surface application, probably because of a better survival with subsurface injection and a shorter leaching path.

  13. Persistence and Leaching Potential of Microorganisms and Mineral N in Animal Manure Applied to Intact Soil Columns

    PubMed Central

    Forslund, Anita; Bui, Xuan Thanh; Juhler, René K.; Petersen, Søren O.; Lægdsmand, Mette

    2013-01-01

    Pathogens may reach agricultural soils through application of animal manure and thereby pose a risk of contaminating crops as well as surface and groundwater. Treatment and handling of manure for improved nutrient and odor management may also influence the amount and fate of manure-borne pathogens in the soil. A study was conducted to investigate the leaching potentials of a phage (Salmonella enterica serovar Typhimurium bacteriophage 28B) and two bacteria, Escherichia coli and Enterococcus species, in a liquid fraction of raw pig slurry obtained by solid-liquid separation of this slurry and in this liquid fraction after ozonation, when applied to intact soil columns by subsurface injection. We also compared leaching potentials of surface-applied and subsurface-injected raw slurry. The columns were exposed to irrigation events (3.5-h period at 10 mm h−1) after 1, 2, 3, and 4 weeks of incubation with collection of leachate. By the end of incubation, the distribution and survival of microorganisms in the soil of each treatment and in nonirrigated columns with injected raw slurry or liquid fraction were determined. E. coli in the leachates was quantified by both plate counts and quantitative PCR (qPCR) to assess the proportions of culturable and nonculturable (viable and nonviable) cells. Solid-liquid separation of slurry increased the redistribution in soil of contaminants in the liquid fraction compared to raw slurry, and the percent recovery of E. coli and Enterococcus species was higher for the liquid fraction than for raw slurry after the four leaching events. The liquid fraction also resulted in more leaching of all contaminants except Enterococcus species than did raw slurry. Ozonation reduced E. coli leaching only. Injection enhanced the leaching potential of the microorganisms investigated compared to surface application, probably because of a better survival with subsurface injection and a shorter leaching path. PMID:23124240

  14. Salmonella enterica Serovar Typhimurium and Escherichia coli Contamination of Root and Leaf Vegetables Grown in Soils with Incorporated Bovine Manure

    PubMed Central

    Natvig, Erin E.; Ingham, Steven C.; Ingham, Barbara H.; Cooperband, Leslie R.; Roper, Teryl R.

    2002-01-01

    Bovine manure, with or without added Salmonella enterica serovar Typhimurium (three strains), was incorporated into silty clay loam (SCL) and loamy sand (LS) soil beds (53- by 114-cm surface area, 17.5 cm deep) and maintained in two controlled-environment chambers. The S. enterica serovar Typhimurium inoculum was 4 to 5 log CFU/g in manure-fertilized soil. The conditions in the two environmental chambers, each containing inoculated and uninoculated beds of manure-fertilized soil, simulated daily average Madison, Wis., weather conditions (hourly temperatures, rainfall, daylight, and humidity) for a 1 March or a 1 June manure application and subsequent vegetable growing seasons ending 9 August or 28 September, respectively. Core soil samples were taken biweekly from both inoculated and uninoculated soil beds in each chamber. Radishes, arugula, and carrots were planted in soil beds, thinned, and harvested. Soils, thinned vegetables, and harvested vegetables were analyzed for S. enterica serovar Typhimurium and Escherichia coli (indigenous in manure). After the 1 March manure application, S. enterica serovar Typhimurium was detected at low levels in both soils on 31 May, but not on vegetables planted 1 May and harvested 12 July from either soil. After the 1 June manure application, S. enterica serovar Typhimurium was detected in SCL soil on 7 September and on radishes and arugula planted in SCL soil on 15 August and harvested on 27 September. In LS soil, S. enterica serovar Typhimurium died at a similar rate (P ≥ 0.05) after the 1 June manure application and was less often detected on arugula and radishes harvested from this soil compared to the SCL soil. Pathogen levels on vegetables were decreased by washing. Manure application in cool (daily average maximum temperature of <10°C) spring conditions is recommended to ensure that harvested vegetables are not contaminated with S. enterica serovar Typhimurium. Manure application under warmer (daily average maximum

  15. Carbon dynamics in different soil types amended with pig slurry, pig manure and its biochar

    NASA Astrophysics Data System (ADS)

    Yanardag, Ibrahim H.; Zornoza, Raúl; Faz, Ángel; Büyükkiliç-Yanardaǧ, Asuman; Mermut, Ahmet R.

    2014-05-01

    Determining the structure and components of soil and soil organic matter is very important in terms of sustainable agriculture and forestry and greenhouse gases emissions. Organic management can increase labile C and N in the short-term, and total soil C and N in the long-term, but less is known about how management practices may affect soil organic C (SOC)quality and stability. Methods to improve the management of livestock slurries to reduce the environmental impact and carbon losses are gaining importance. There is a need to find the best wastes treatment which enhances soil fertility but also carbon sequestration, to mitigate the effects of global warming. The objective of this study was to assess the short-term changes in SOC pools, using raw pig slurry, the solid phase of pig slurry, and its biochar as amendment in different soil types (Regosol, Luvisol and Kastanozem). The three different amendments were applied at 5 g C kg-1 soil. An unamended soil for each type was used as control. Soils were incubated in triplicate for 60 days at 25ºC and at 55% of their water holding capacity. Samples were sampled to monitor the evolution of soil organic and inorganic carbon, recalcitrant carbon, soluble carbon, carbon mineralization, SOC thermal distribution (thermogravimetric analysis - differential scanning calorimetry - quadrupole mass spectrometry), and characterization of functional groups (Fourier transform infrared spectroscopy (FTIR)). Results showed that soils amended with raw pig slurry and the solid phase of the slurry showed higher values of soluble carbon, and higher carbon mineralization rates compared to biochar application, which showed values similar to controls. SOC increased at the end of incubation with biochar and the solid phase of the slurry applications in Kastanozem and Regosol. Thermogravimetric results showed an increased weight loss of the Regosol compared to Luvisol and Kastanozem, owing to the higher content of soil carbonates. Luvisol and

  16. The effects of application of poultry manure to crude oil polluted soils on maize (Zea mays) growth and soil properties.

    PubMed

    Ogboghodo, I A; Erebor, E B; Osemwota, I O; Isitekhale, H H

    2004-01-01

    An investigation of the effects of application of poultry manure to crude oil polluted soils on the growth of maize and soil properties was carried out under natural conditions at the Ambrose Alli University, Ekpoma, Nigeria. Potted maize plants were treated to crude oil pollution at four different levels (0, 25, 50 and 75 mL) and amended with poultry manure at four rates of application (0, 50, 100 and 150 kg ha(-1)) two weeks after pollution. Results obtained showed that percent survival rate, plant height and dry matter yield decreased with increase in crude oil contamination. For example % seed germination decreased from 93 to 0% as crude oil increased from 0 to 75 mL without poultry manure application while plant height decreased from 97 to 20 cm. However when amended with poultry manure, statistical analysis showed that the highest rate of crude oil application (75 mL) and the 150 kg ha(-1) rate poultry manure application affected maize growth, dry matter yield and soil properties significantly. For example at the 75 mL crude oil application, plant height increased from 20 to 149 cm as level of manure applied increased from 0 to 150 kg ha(-1) while dry matter yield increased from 27 to 58 g.

  17. Tracking agricultural soil nitric oxide emission variations with novel isotopic measurements

    NASA Astrophysics Data System (ADS)

    Miller, D. J.; Chai, J.; Guo, F.; Overby, S.; Dell, C. J.; Karsten, H.; Hastings, M. G.

    2016-12-01

    Agricultural production systems impact the reactive nitrogen cycle via atmospheric nitrogen emissions including nitric oxide, denoted as total nitrogen oxides (NOx). NOx serve as precursors to ozone and nitrate aerosols, influencing air quality, radiative forcing, and ecosystem health. With recent declines in fuel combustion sources, soil emissions are an increasing contributor to NOx budgets. However, spatially heterogeneous, episodic soil NOx pulses are challenging to constrain and remain highly uncertain. Using a novel hourly resolution soil flux chamber-based NOx collection method, we investigate fertilizer management and climatic controls on cropland soil NOx flux and nitrogen isotopic composition (δ15N-NOx) natural abundance variations with field-based and laboratory measurements. No-till, rain-fed corn plots were sampled daily (triplicate isotope samples per treatment per day) following broadcast and shallow-disk injected dairy manure applications as part of a sustainable dairy cropping study in State College, PA (Penn State University; USDA-ARS). Injected manure plots exhibited median fluxes two times higher with larger spatial variations than that for broadcast manure. Soil emission δ15N-NOx signatures of -45 to -20 ‰ were correlated with flux magnitudes across both treatments. Median δ15N-NOx signatures for injected manure were lower with larger spatial variations (-32 ± 9 ‰) than that for broadcast manure (-24 ± 1.5 ‰). These differences are likely linked with higher NH4+ availability for nitrification with injected manure in contrast with higher NH3 volatilization and higher soil δ15N-NH4+ for broadcast manure. Although NOx fluxes were suppressed 1-2 days after heavy rainfall (>35 % water-filled pore space), δ15N-NOx remained consistent. Controlled laboratory incubation studies will also be presented quantifying links with inorganic substrate and fertilizer δ15N. Our observations suggest that agricultural soil δ15N-NOx signatures are

  18. Persistence of Mycobacterium avium subsp. paratuberculosis in soil, crops, and ensiled feed following manure spreading on infected dairy farms

    PubMed Central

    Fecteau, Marie-Eve; Hovingh, Ernest; Whitlock, Robert H.; Sweeney, Raymond W.

    2013-01-01

    The goal of this study was to determine the persistence of Mycobacterium avium subsp. paratuberculosis (MAP) in soil, crops, and ensiled feeds following manure spreading. This bacterium was often found in soil samples, but less frequently in harvested feeds and silage. Spreading of manure on fields used for crop harvest is preferred to spreading on grazing pastures. PMID:24179246

  19. Developing methodologies for estimation of manure across livestock systems using agricultural census data

    NASA Astrophysics Data System (ADS)

    Khalil, Mohammad I.; Muldowney, John; Osborne, Bruce

    2017-04-01

    Livestock production and management-induced emissions of greenhouse gases (GHGs), comprising 18% of total global anthropogenic emissions together with air pollutants, have major atmospheric and ecosystem-related impacts. Identification of categorical/sub-categorical hotspots associated with these emissions and the estimation of emissions factors (EFs), including the use of the Intergovernmental Panel on Climate Change defaults (Tier 1), are key objectives in the preparation of reasonable, and transparent national reporting inventories (Tier 2). They also provide a basis for assessment of technological/management approaches for emissions reduction. For this, data on manure (solid/FYM and slurry/liquid) production across livestock categories, housing types and periods, storage types and application methodologies are required. However, relevant agricultural activity data are not sufficient to quantify the proportion and timing of the amounts of manure applied to major land use types and for different seasons. We have used the recent Census of Agriculture survey data 2010, collected by the Central Statistics Office, Ireland. Based on the compiled datasheets, several steps have been taken to generate missing information (e.g., number of individual livestock categories/subcategories) and to develop methodologies for calculating the proportion of slurry and manure production and application across farm categories. Among livestock categories, the proportion (%) of slurry over solids was higher for pigs (99:1) than the proportion derived from cattle (61:39). Solid manure production from other livestock systems derived mostly from loose-bedded houses. There were large differences between the proportions estimated using the number of farms and the livestock population. A major proportion of the slurry was applied to grassland (97 vs. 73) and the amounts applied in spring and summer were similar (40-42 vs. 36-39), but significantly higher than the autumn application (18 vs. 24

  20. Decay of bacterial pathogens, fecal indicators, and real-time quantitative PCR genetic markers in manure-amended soils.

    PubMed

    Rogers, Shane W; Donnelly, Matthew; Peed, Lindsay; Kelty, Catherine A; Mondal, Sumona; Zhong, Zirong; Shanks, Orin C

    2011-07-01

    This study examined persistence and decay of bacterial pathogens, fecal indicator bacteria (FIB), and emerging real-time quantitative PCR (qPCR) genetic markers for rapid detection of fecal pollution in manure-amended agricultural soils. Known concentrations of transformed green fluorescent protein-expressing Escherichia coli O157:H7/pZs and red fluorescent protein-expressing Salmonella enterica serovar Typhimurium/pDs were added to laboratory-scale manure-amended soil microcosms with moisture contents of 60% or 80% field capacity and incubated at temperatures of -20°C, 10°C, or 25°C for 120 days. A two-stage first-order decay model was used to determine stage 1 and stage 2 first-order decay rate coefficients and transition times for each organism and qPCR genetic marker in each treatment. Genetic markers for FIB (Enterococcus spp., E. coli, and Bacteroidales) exhibited decay rate coefficients similar to that of E. coli O157:H7/pZs but not of S. enterica serovar Typhimurium/pDs and persisted at detectable levels longer than both pathogens. Concentrations of these two bacterial pathogens, their counterpart qPCR genetic markers (stx1 and ttrRSBCA, respectively), and FIB genetic markers were also correlated (r = 0.528 to 0.745). This suggests that these qPCR genetic markers may be reliable conservative surrogates for monitoring fecal pollution from manure-amended land. Host-associated qPCR genetic markers for microbial source tracking decayed rapidly to nondetectable concentrations, long before FIB, Salmonella enterica serovar Typhimurium/pDs, and E. coli O157:H7/pZs. Although good indicators of point source or recent nonpoint source fecal contamination events, these host-associated qPCR genetic markers may not be reliable indicators of nonpoint source fecal contamination events that occur weeks following manure application on land.

  1. Runoff losses of sediment and phosphorus from no-till and cultivated soils receiving dairy manure.

    PubMed

    Verbree, David A; Duiker, Sjoerd W; Kleinman, Peter J A

    2010-01-01

    Managing manure in no-till systems is a water quality concern because surface application of manure can enrich runoff with dissolved phosphorus (P), and incorporation by tillage increases particulate P loss. This study compared runoff from well-drained and somewhat poorly drained soils under corn (Zea mays, L.) production that had been in no-till for more than 10 yr. Dairy cattle (Bos taurus L.) manure was broadcast into a fall planted cover crop before no-till corn planting or incorporated by chisel/disk tillage in the absence of a cover crop. Rainfall simulations (60 mm h(-1)) were performed after planting, mid-season, and post-harvest in 2007 and 2008. In both years and on both soils, no-till yielded significantly less sediment than did chisel/disking. Relative effects of tillage on runoff and P loss differed with soil. On the well-drained soil, runoff depths from no-till were much lower than with chisel/disking, producing significantly lower total P loads (22-50% less). On the somewhat poorly drained soil, there was little to no reduction in runoff depth with no-till, and total P loads were significantly greater than with chisel/disking (40-47% greater). Particulate P losses outweighed dissolved P losses as the major concern on the well-drained soil, whereas dissolved P from surface applied manure was more important on the somewhat poorly drained soil. This study confirms the benefit of no-till to erosion and total P runoff control on well-drained soils but highlights trade-offs in no-till management on somewhat poorly drained soils where the absence of manure incorporation can exacerbate total P losses.

  2. Effects of manure compost application on soil microbial community diversity and soil microenvironments in a temperate cropland in China.

    PubMed

    Zhen, Zhen; Liu, Haitao; Wang, Na; Guo, Liyue; Meng, Jie; Ding, Na; Wu, Guanglei; Jiang, Gaoming

    2014-01-01

    The long-term application of excessive chemical fertilizers has resulted in the degeneration of soil quality parameters such as soil microbial biomass, communities, and nutrient content, which in turn affects crop health, productivity, and soil sustainable productivity. The objective of this study was to develop a rapid and efficient solution for rehabilitating degraded cropland soils by precisely quantifying soil quality parameters through the application of manure compost and bacteria fertilizers or its combination during maize growth. We investigated dynamic impacts on soil microbial count, biomass, basal respiration, community structure diversity, and enzyme activity using six different treatments [no fertilizer (CK), N fertilizer (N), N fertilizer + bacterial fertilizer (NB), manure compost (M), manure compost + bacterial fertilizer (MB), and bacterial fertilizer (B)] in the plowed layer (0-20 cm) of potted soil during various maize growth stages in a temperate cropland of eastern China. Denaturing gradient electrophoresis (DGGE) fingerprinting analysis showed that the structure and composition of bacterial and fungi communities in the six fertilizer treatments varied at different levels. The Shannon index of bacterial and fungi communities displayed the highest value in the MB treatments and the lowest in the N treatment at the maize mature stage. Changes in soil microorganism community structure and diversity after different fertilizer treatments resulted in different microbial properties. Adding manure compost significantly increased the amount of cultivable microorganisms and microbial biomass, thus enhancing soil respiration and enzyme activities (p<0.01), whereas N treatment showed the opposite results (p<0.01). However, B and NB treatments minimally increased the amount of cultivable microorganisms and microbial biomass, with no obvious influence on community structure and soil enzymes. Our findings indicate that the application of manure compost plus

  3. Effects of Manure Compost Application on Soil Microbial Community Diversity and Soil Microenvironments in a Temperate Cropland in China

    PubMed Central

    Zhen, Zhen; Liu, Haitao; Wang, Na; Guo, Liyue; Meng, Jie; Ding, Na; Wu, Guanglei; Jiang, Gaoming

    2014-01-01

    The long-term application of excessive chemical fertilizers has resulted in the degeneration of soil quality parameters such as soil microbial biomass, communities, and nutrient content, which in turn affects crop health, productivity, and soil sustainable productivity. The objective of this study was to develop a rapid and efficient solution for rehabilitating degraded cropland soils by precisely quantifying soil quality parameters through the application of manure compost and bacteria fertilizers or its combination during maize growth. We investigated dynamic impacts on soil microbial count, biomass, basal respiration, community structure diversity, and enzyme activity using six different treatments [no fertilizer (CK), N fertilizer (N), N fertilizer + bacterial fertilizer (NB), manure compost (M), manure compost + bacterial fertilizer (MB), and bacterial fertilizer (B)] in the plowed layer (0–20 cm) of potted soil during various maize growth stages in a temperate cropland of eastern China. Denaturing gradient electrophoresis (DGGE) fingerprinting analysis showed that the structure and composition of bacterial and fungi communities in the six fertilizer treatments varied at different levels. The Shannon index of bacterial and fungi communities displayed the highest value in the MB treatments and the lowest in the N treatment at the maize mature stage. Changes in soil microorganism community structure and diversity after different fertilizer treatments resulted in different microbial properties. Adding manure compost significantly increased the amount of cultivable microorganisms and microbial biomass, thus enhancing soil respiration and enzyme activities (p<0.01), whereas N treatment showed the opposite results (p<0.01). However, B and NB treatments minimally increased the amount of cultivable microorganisms and microbial biomass, with no obvious influence on community structure and soil enzymes. Our findings indicate that the application of manure compost plus

  4. Effect of farmyard manure rate on water erosion of a Mediterranean soil: determination of the critical point of inefficacy

    NASA Astrophysics Data System (ADS)

    Annabi, Mohamed; Bahri, Haithem; Cheick M'Hamed, Hatem; Hermessi, Taoufik

    2016-04-01

    Intensive cultivation of soils, using multiple soil tillage, led to the decrease of their organic matter content and structural stability in several cultivated area of the Mediterranean countries. In these degraded soils, the addition of organic products, traditionally the animal manure, should improve soil health among them the resistance of soil to water erosion. The aim of this study was to evaluate after 1 year of the addition to a cambisoil different doses of farmyard manure on soil organic matter content, on microbial activity and on aggregate stability (proxy to soil resistance to water erosion). The statistical process (bilinear model) was used to found a point at which the addition of the organic product no longer influences the soil resistance to erosion. The farmyard manure issued from a cow breeding was composted passively during 4 months and used to amend a small plots of a cultivated cambisol (silty-clay texture, 0.9% TOC) located in the northeast of Tunisia (Morneg region). The manure was intimately incorporate to the soil. The manure organic matter content was 31%, and its isohumic coefficient was 49%. Twelve dose of manure were tested: from 0 to 220 t C.ha-1. The experiment was started on September 2011. In November 2012, soil sampling was done and soil organic carbon content (Walkley-Black method) and soil aggregate stability (wet method of Le Bissonnais) were assessed. A laboratory incubations of soil+manure mixtures, with the same proportions as tested in the field conditions, was carried at 28°C and at 75% of the mixture field capacity water retention. Carbon mineralization was monitored during three months incubation. Results show that the addition of farmyard manure stimulated the microbial activity proportionally to the added dose. This activation is due to the presence of easily biodegradable carbon in the manure, which increases with increasing manure dose. On the other hand, the addition of manure increased the aggregate stability with

  5. Adsorption and degradation of five selected antibiotics in agricultural soil.

    PubMed

    Pan, Min; Chu, L M

    2016-03-01

    Large quantities of antibiotics are being added to agricultural fields worldwide through the application of wastewater, manures and biosolids, resulting in antibiotic contamination and elevated environmental risks in terrestrial environments. Most studies on the environmental fate of antibiotics focus on aquatic environments or wastewater treatment plants. Little is known about the behavior of antibiotics at environmentally relevant concentrations in agricultural soil. In this study we evaluated the adsorption and degradation of five different antibiotics (tetracycline, sulfamethazine, norfloxacin, erythromycin, and chloramphenicol) in sterilized and non-sterilized agricultural soils under aerobic and anaerobic conditions. Adsorption was highest for tetracycline (Kd, 1093 L/kg), while that for sulfamethazine was negligible (Kd, 1.365 L/kg). All five antibiotics were susceptible to microbial degradation under aerobic conditions, with half-lives ranging from 2.9 to 43.3 d in non-sterilized soil and 40.8 to 86.6 d in sterilized soil. Degradation occurred at a higher rate under aerobic conditions but was relatively persistent under anaerobic conditions. For all the antibiotics, a higher initial concentration was found to slow down degradation and prolong persistence in soil. The degradation behavior of the antibiotics varied in relation to their physicochemical properties as well as the microbial activities and aeration of the recipient soil. The poor adsorption and relative persistence of sulfamethazine under both aerobic and anaerobic conditions suggest that it may pose a higher risk to groundwater quality. An equation was proposed to predict the fate of antibiotics in soil under different field conditions, and assess their risks to the environment.

  6. Exposure to dairy manure leads to greater antibiotic resistance and increased mass-specific respiration in soil microbial communities.

    PubMed

    Wepking, Carl; Avera, Bethany; Badgley, Brian; Barrett, John E; Franklin, Josh; Knowlton, Katharine F; Ray, Partha P; Smitherman, Crystal; Strickland, Michael S

    2017-03-29

    Intensifying livestock production to meet the demands of a growing global population coincides with increases in both the administration of veterinary antibiotics and manure inputs to soils. These trends have the potential to increase antibiotic resistance in soil microbial communities. The effect of maintaining increased antibiotic resistance on soil microbial communities and the ecosystem processes they regulate is unknown. We compare soil microbial communities from paired reference and dairy manure-exposed sites across the USA. Given that manure exposure has been shown to elicit increased antibiotic resistance in soil microbial communities, we expect that manure-exposed sites will exhibit (i) compositionally different soil microbial communities, with shifts toward taxa known to exhibit resistance; (ii) greater abundance of antibiotic resistance genes; and (iii) corresponding maintenance of antibiotic resistance would lead to decreased microbial efficiency. We found that bacterial and fungal communities differed between reference and manure-exposed sites. Additionally, the β-lactam resistance gene ampC was 5.2-fold greater under manure exposure, potentially due to the use of cephalosporin antibiotics in dairy herds. Finally, ampC abundance was positively correlated with indicators of microbial stress, and microbial mass-specific respiration, which increased 2.1-fold under manure exposure. These findings demonstrate that the maintenance of antibiotic resistance associated with manure inputs alters soil microbial communities and ecosystem function.

  7. The fate of antibiotic resistance genes and class 1 integrons following the application of swine and dairy manure to soils.

    PubMed

    Sandberg, Kyle D; LaPara, Timothy M

    2016-02-01

    The goal of this study was to determine the fate of antibiotic resistance genes (ARGs) and class 1 integrons following the application of swine and dairy manure to soil. Soil microcosms were amended with either manure from swine fed subtherapeutic levels of antibiotics or manure from dairy cows that were given antibiotics only rarely and strictly for veterinary purposes. Microcosms were monitored for 6 months using quantitative PCR targeting 16S rRNA genes (a measure of bacterial biomass), intI1, erm(B), tet(A), tet(W) and tet(X). Swine manure had 10- to 100-fold higher levels of ARGs than the dairy manure, all of which decayed over time after being applied to soil. A modified Collins-Selleck model described the decay of ARGs in the soil microcosms well, particularly the characteristic in which the decay rate declined over time. By the completion of the soil microcosm experiments, ARGs in the dairy manure-amended soils returned to background levels, whereas the ARGs in swine manure remained elevated compared to control microcosms. Our research suggests that the use of subtherapeutic use of antibiotics in animal feed could lead to the accumulation of ARGs in soils to which manure is applied. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  8. Salmonella survival in manure-treated soils during simulated seasonal temperature exposure.

    PubMed

    Holley, Richard A; Arrus, Katia M; Ominski, Kimberly H; Tenuta, Mario; Blank, Gregory

    2006-01-01

    Addition of animal manure to soil can provide opportunity for Salmonella contamination of soil, water, and food. This study examined how exposure of hog manure-treated loamy sand and clay soils to different simulated seasonal temperature sequences influenced the length of Salmonella survival. A six-strain cocktail of Salmonella serovars (Agona, Hadar, Heidelberg, Montevideo, Oranienburg, and Typhimurium) was added to yield 5 log cfu/g directly to about 5 kg of the two soils and moisture adjusted to 60 or 80% of field capacity (FC). Similarly, the Salmonella cocktail was mixed with fresh manure slurry from a hog nursery barn and the latter added to the two soils at 25 g/kg to achieve 5 log cfu/g Salmonella. Manure was mixed either throughout the soil or with the top kilogram of soil and the entire soil volume was adjusted to 60 or 80% FC. Soil treatments were stored 180 d at temperature sequences representing winter to summer (-18, 4, 10, 25 degrees C), spring to summer (4, 10, 25, 30 degrees C), or summer to winter (25, 10, 4, -18 degrees C) seasonal periods with each temperature step lasting 45 d. Samples for Salmonella recovery by direct plating or enrichment were taken at 0, 7, and 15 d post-inoculation and thereafter at 15-d intervals to 180 d. Salmonella numbers decreased during application to soil and the largest decreases occurred within the first week. Higher soil moisture, manure addition, and storage in the clay soil increased Salmonella survival. Salmonella survived longest (> or = 180 d) in both soils during summer-winter exposure but was not isolated after 160 d from loamy sand soil exposed to other seasonal treatments. For all but one treatment decimal reduction time (DRT45d) values calculated from the first 45 d after application were < or = 30 d and suggested that a 30-d delay between field application of manure in the spring or fall and use of the land would provide reasonable assurance that crop and animal contamination by Salmonella would be

  9. Monitoring changes in soil organic carbon pools, nitrogen, phosphorus, and sulfur under different agricultural management practices in the tropics.

    PubMed

    Verma, Bibhash C; Datta, Siba Prasad; Rattan, Raj K; Singh, Anil K

    2010-12-01

    Soil organic matter not only affects sustainability of agricultural ecosystems, but also extremely important in maintaining overall quality of environment as soil contains a significant part of global carbon stock. Hence, we attempted to assess the influence of different tillage and nutrient management practices on various stabilized and active soil organic carbon pools, and their contribution to the extractable nitrogen phosphorus and sulfur. Our study confined to the assessment of impact of agricultural management practices on the soil organic carbon pools and extractable nutrients under three important cropping systems, viz. soybean-wheat, maize-wheat, and rice-wheat. Results indicated that there was marginal improvement in Walkley and Black content in soil under integrated and organic nutrient management treatments in soybean-wheat, maize-wheat, and rice-wheat after completion of four cropping cycles. Improvement in stabilized pools of soil organic carbon (SOC) was not proportional to the applied amount of organic manures. While, labile pools of SOC were increased with the increase in amount of added manures. Apparently, green manure (Sesbania) was more effective in enhancing the lability of SOC as compared to farmyard manure and crop residues. The KMnO(4)-oxidizable SOC proved to be more sensitive and consistent as an index of labile pool of SOC compared to microbial biomass carbon. Under different cropping sequences, labile fractions of soil organic carbon exerted consistent positive effect on the extractable nitrogen, phosphorus, and sulfur in soil.

  10. Trans-disciplinary soil science research: Impacts of dairy nutrition on manure chemistry and the environment

    USDA-ARS?s Scientific Manuscript database

    The on-going trend of consolidation and intensification of animal agriculture requires a greater dependence on purchased feed. Larger livestock farms and more imported feed can result in the excretion of manure nutrients that may surpass the recycling capacity of local land, air, and water resource...

  11. Evaluating antibiotic resistance genes in soils with applied manures

    USDA-ARS?s Scientific Manuscript database

    Antibiotics are commonly used in livestock production to promote growth and combat disease. Recent studies have shown the potential for spread of antibiotic resistance genes (ARG) to the environment following application of livestock manures. In this study, concentrations of bacteria with ARG in soi...

  12. Greenhouse gas fluxes from agricultural soils of Kenya and Tanzania

    NASA Astrophysics Data System (ADS)

    Rosenstock, Todd S.; Mpanda, Mathew; Pelster, David E.; Butterbach-Bahl, Klaus; Rufino, Mariana C.; Thiong'o, Margaret; Mutuo, Paul; Abwanda, Sheila; Rioux, Janie; Kimaro, Anthony A.; Neufeldt, Henry

    2016-06-01

    Knowledge of greenhouse gas (GHG) fluxes in soils is a prerequisite to constrain national, continental, and global GHG budgets. However, data characterizing fluxes from agricultural soils of Africa are markedly limited. We measured carbon dioxide (CO2), nitrous oxide (N2O), and methane (CH4) fluxes at 10 farmer-managed sites of six crop types for 1 year in Kenya and Tanzania using static chambers and gas chromatography. Cumulative emissions ranged between 3.5-15.9 Mg CO2-C ha-1 yr-1, 0.4-3.9 kg N2O-N ha-1 yr-1, and -1.2-10.1 kg CH4-C ha-1 yr-1, depending on crop type, environmental conditions, and management. Manure inputs increased CO2 (p = 0.03), but not N2O or CH4, emissions. Soil cultivation had no discernable effect on emissions of any of the three gases. Fluxes of CO2 and N2O were 54-208% greater (p < 0.05) during the wet versus the dry seasons for some, but not all, crop types. The heterogeneity and seasonality of fluxes suggest that the available data describing soil fluxes in Africa, based on measurements of limited duration of only a few crop types and agroecological zones, are inadequate to use as a basis for estimating the impact of agricultural soils on GHG budgets. A targeted effort to understand the magnitude and mechanisms underlying African agricultural soil fluxes is necessary to accurately estimate the influence of this source on the global climate system and for determining mitigation strategies.

  13. Ammonia transformations and abundance of ammonia oxidizers in a clay soil underlying a manure pond.

    PubMed

    Sher, Yonatan; Baram, Shahar; Dahan, Ofer; Ronen, Zeev; Nejidat, Ali

    2012-07-01

    Unlined manure ponds are constructed on clay soil worldwide to manage farm waste. Seepage of ammonia-rich liquor into underlying soil layers contributes to groundwater contamination by nitrate. To identify the possible processes that lead to the production of nitrate from ammonia in this oxygen-limited environment, we studied the diversity and abundance of ammonia-transforming microorganisms under an unlined manure pond. The numbers of ammonia-oxidizing bacteria and anammox bacteria were most abundant in the top of the soil profile and decreased significantly with depth (0.5 m), correlating with soil pore-water ammonia concentrations and soil ammonia concentrations, respectively. On the other hand, the numbers of ammonia-oxidizing archaea were relatively constant throughout the soil profile (10(7) amoA copies per g(soil)). Nitrite-oxidizing bacteria were detected mainly in the top 0.2 m. The results suggest that nitrate accumulation in the vadose zone under the manure pond could be the result of complete aerobic nitrification (ammonia oxidation to nitrate) and could exist as a byproduct of anammox activity. While the majority of the nitrogen was removed within the 0.5-m soil section, possibly by combined anammox and heterotrophic denitrification, a fraction of the produced nitrate leached into the groundwater.

  14. Soil management: The key to soil quality and sustainable agriculture

    NASA Astrophysics Data System (ADS)

    Basch, Gottlieb; Barão, Lúcia; Soares, Miguel

    2017-04-01

    Today, after the International Year of Soils in 2015 and the proclamation by the International Union of Soil Sciences of the International Decade of Soils 2015-2020, much attention is paid to soil quality. Often used interchangeably, both terms, soil quality and soil health, refer to dynamic soil properties such as soil organic matter or pH, while soil quality also includes inherent soil properties such as texture or mineral composition. However, it is the dynamic or manageable properties that adequate soil management can influence and thus contribute to a well-functioning soil environment capable to deliver the soil-mediated provisioning, regulating and supporting ecosystem services and soil functions. This contribution intends to highlight the key principles of sustainable soil management and provide evidence that they are compliant with a productive, resource efficient and ecologically friendly agriculture. Paradoxically, and despite benefitting from good soil quality, agriculture itself when based on conventional, especially intensive tillage-based soil management practices contributes decisively to soil degradation and to several of the soil threats as identified by the Soil Thematic Strategy, being soil erosion and soil organic matter decline the most notorious ones. To mitigate soil degradation, the European Union's Common Agricultural Policy has introduced conservation measures, mainly through cross-compliance measures supposed to guarantee minimum soil cover, to limit soil erosion and to maintain the levels of soil organic matter. However, it remains unclear to what extent EU member states apply these 'Good Agricultural and Environmental Condition' (GAEC) measures to their utilized agricultural areas. Effective and cost-efficient soil management systems able to conserve or to restore favourable soil conditions, to minimize soil erosion and to invert soil organic matter and soil biodiversity decline and improve soil structure are those capable to mimic as

  15. Land application of tylosin and chlortetracycline swine manure: Impacts to soil nutrients and soil microbial community structure.

    PubMed

    Stone, James J; Dreis, Erin K; Lupo, Christopher D; Clay, Sharon A

    2011-01-01

    The land application of aged chortetracycle (CTC) and tylosin-containing swine manure was investigated to determine associated impacts to soil microbial respiration, nutrient (phosphorus, ammonium, nitrate) cycling, and soil microbial community structure under laboratory conditions. Two silty clay loam soils common to southeastern South Dakota were used. Aerobic soil respiration results using batch reactors containing a soil-manure mixture showed that interactions between soil, native soil microbial populations, and antimicrobials influenced CO(2) generation. The aged tylosin treatment resulted in the greatest degree of CO(2) inhibition, while the aged CTC treatment was similar to the no-antimicrobial treatment. For soil columns in which manure was applied at a one-time agronomic loading rate, there was no significant difference in soil-P behavior between either aged CTC or tylosin and the no-antimicrobial treatment. For soil-nitrogen (ammonium and nitrate), the aged CTC treatment resulted in rapid ammonium accumulation at the deeper 40cm soil column depth, while nitrate production was minimal. The aged CTC treatment microbial community structure was different than the no-antimicrobial treatment, where amines/amide and carbohydrate chemical guilds utilization profile were low. The aged tylosin treatment also resulted in ammonium accumulation at 40 cm column depth, however nitrate accumulation also occurred concurrently at 10 cm. The microbial community structure for the aged tylosin was also significantly different than the no-antimicrobial treatment, with a higher degree of amines/amides and carbohydrate chemical guild utilization compared to the no-antimicrobial treatment. Study results suggest that land application of CTC and tylosin-containing manure appears to fundamentally change microbial-mediated nitrogen behavior within soil A horizons.

  16. Tillage system and time post-liquid dairy manure: Effects on runoff, sediment and nutrients losses

    USDA-ARS?s Scientific Manuscript database

    Liquid manure applied in agricultural lands improves soil quality. However, incorrect management of manure may cause environmental problems due to sediments and nutrients losses associated to runoff. The aims of this work were to: (i) evaluate the time effect of post-liquid dairy manure (LDM) applic...

  17. Persistence of Indigenous Escherichia coli in Raw Bovine Manure-Amended Soil.

    PubMed

    Çekiç, Samantha K; De, Jaysankar; Jubair, Mohammad; Schneider, Keith R

    2017-09-01

    The Food Safety Modernization Act attempts to reduce produce-related foodborne illness by using preventive rather than reactive measures. The goal of this research was to determine the persistence of manure-borne generic Escherichia coli under laboratory and field conditions. The population density of naturally occurring E. coli was ∼7.2 and 5.4 log CFU/10 g in pre- and postscreened manures, respectively. Postscreened (i.e. after the liquid manure has passed through a screen) manure was applied at light, medium, and heavy rates to fields in Live Oak and Citra, FL, during the fall and summer. Laboratory microcosms of the manure-amended soils (comparable to the field's heavy application rate of manure) from both locations were maintained at 20 and 30°C. Persistence of E. coli, moisture content, and pH were monitored until E. coli became unrecoverable. The longest E. coli persistence seen in field trails was during the summer and fall trials from Citra (heavy application) that terminated on day 112 and day 280, respectively. The rate of E. coli decay ranged from 0.02 to 0.04 log CFU per day across all manure application rates, seasons, and locations. In the microcosm studies, the E. coli became extinct on day 210 in the 30°C, whereas they became unrecoverable on day 420 in the 20°C microcosms. The relatively prolonged persistence of E. coli in the microcosms suggests that survival under laboratory conditions does not mimic real-world survival rates and may not be adequate for predicting E. coli persistence in the field. The persistence data also suggest that the risk from E. coli associated with new contamination events, such as wild life intrusion, runoff, or other vectors, may be greater than the risk associated with the long-term survival of manure-borne E. coli, although more work is needed to confirm this hypothesis.

  18. Knowledge needs, available practices, and future challenges in agricultural soils

    NASA Astrophysics Data System (ADS)

    Key, Georgina; Whitfield, Mike G.; Cooper, Julia; De Vries, Franciska T.; Collison, Martin; Dedousis, Thanasis; Heathcote, Richard; Roth, Brendan; Mohammed, Shamal; Molyneux, Andrew; Van der Putten, Wim H.; Dicks, Lynn V.; Sutherland, William J.; Bardgett, Richard D.

    2016-10-01

    The goal of this study is to clarify research needs and identify effective practices for enhancing soil health. This was done by a synopsis of soil literature that specifically tests practices designed to maintain or enhance elements of soil health. Using an expert panel of soil scientists and practitioners, we then assessed the evidence in the soil synopsis to highlight practices beneficial to soil health, practices considered detrimental, and practices that need further investigation. A partial Spearman's correlation was used to analyse the panel's responses. We found that increased certainty in scientific evidence led to practices being considered to be more effective due to them being empirically justified. This suggests that for practices to be considered effective and put into practice, a substantial body of research is needed to support the effectiveness of the practice. This is further supported by the high proportion of practices (33 %), such as changing the timing of ploughing or amending the soil with crops grown as green manures, that experts felt had unknown effectiveness, usually due to insufficiently robust evidence. Only 7 of the 27 reviewed practices were considered to be beneficial, or likely to be beneficial in enhancing soil health. These included the use of (1) integrated nutrient management (organic and inorganic amendments); (2) cover crops; (3) crop rotations; (4) intercropping between crop rows or underneath the main crop; (5) formulated chemical compounds (such as nitrification inhibitors); (6) control of traffic and traffic timing; and (7) reducing grazing intensity. Our assessment, which uses the Delphi technique, is increasingly used to improve decision-making in conservation and agricultural policy, identified practices that can be put into practice to benefit soil health. Moreover, it has enabled us to identify practices that need further research and a need for increased communication between researchers, policy-makers, and

  19. Microbial and chemical markers: runoff transfer in animal manure-amended soils.

    PubMed

    Jaffrezic, Anne; Jardé, Emilie; Pourcher, Anne-Marie; Gourmelon, Michèle; Caprais, Marie-Paule; Heddadj, Djilali; Cottinet, Patrice; Bilal, Muhamad; Derrien, Morgane; Marti, Romain; Mieszkin, Sophie

    2011-01-01

    Fecal contamination of water resources is evaluated by the enumeration of the fecal coliforms and Enterococci. However, the enumeration of these indicators does not allow us to differentiate between the sources of fecal contamination. Therefore, it is important to use alternative indicators of fecal contamination to identify livestock contamination in surface waters. The concentration of fecal indicators (, enteroccoci, and F-specific bacteriophages), microbiological markers (Rum-2-bac, Pig-2-bac, and ), and chemical fingerprints (sterols and stanols and other chemical compounds analyzed by 3D-fluorescence excitation-matrix spectroscopy) were determined in runoff waters generated by an artificial rainfall simulator. Three replicate plot experiments were conducted with swine slurry and cattle manure at agronomic nitrogen application rates. Low amounts of bacterial indicators (1.9-4.7%) are released in runoff water from swine-slurry-amended soils, whereas greater amounts (1.1-28.3%) of these indicators are released in runoff water from cattle-manure-amended soils. Microbial and chemical markers from animal manure were transferred to runoff water, allowing discrimination between swine and cattle fecal contamination in the environment via runoff after manure spreading. Host-specific bacterial and chemical markers were quantified for the first time in runoff waters samples after the experimental spreading of swine slurry or cattle manure.

  20. Influence of sustainable management on aggregate stability and soil organic matter on agricultural soil of southern Spain

    NASA Astrophysics Data System (ADS)

    Morugan-Coronado, Alicia; Arcenegui, Victoria; Mataix-Solera, Jorge; Gomez-Lucas, Ignacio; Garcia-Orenes, Fuensanta

    2016-04-01

    Intensive agriculture has increased crop yields but also posed severe environmental problems. Unsustainable land management such as excessive tillage can lead to a loss of soil fertility and a drastic reduction in the aggregate stability and soil organic matter content. However sustainable agriculture can keep good crop yields with minimal impact on ecological factors conserving the soil quality and its ecosystem services. Sustainable agriculture management promotes the maintenance of soil organic matter levels providing plant nutrients through the microbial decomposition of organic materials. Also this management has a positive effect on soil structure with the improvement of stability of aggregates. The resistance of soil aggregates to the slaking and dispersive effects of water (aggregate stability) is important for maintaining the structure in arable soils. Our purpose was to investigate and compare the effects of sustainable agricultural practices versus intensive agriculture on aggregate stability and soil organic matter. Three agricultural areas are being monitored in the southern of Spain, two of them with citrus orchards (AL) and (FE) and one with grapevine(PA). In all of them two agricultural treatments are being developed, organic with no-tillage management(O) and inorganic fertilization with herbicide application and intensive tillage (I). The sustainable agricultural management (manure, no tillage and vegetation cover) contributed to the improve of soil conditions, increasing organic matter and aggregate stability. Meanwhile, herbicide treatment and intensive tillage with inorganic fertilization managements resulted in the decreasing of aggregate stability and low levels of soil organic carbon. Soil organic matter content is generally low in all unsustainable treatments plots and tends to decline in aggregate stability and soil physical condition. In both treatments the crop yield are comparable.

  1. Soil temperature regulates nitrogen loss from lysimeters following fall and winter manure application

    USDA-ARS?s Scientific Manuscript database

    Many producers practice fall and winter manure spreading for economic and practical reasons. In order to minimize the risk of nitrogen loss between application and crop uptake in the spring, university extension publications and industry professionals often make recommendations based on soil tempera...

  2. Soil temperature regulates phosphorus loss from lysimeters following fall and winter-applied manure application

    USDA-ARS?s Scientific Manuscript database

    Applying manure in the fall and winter increases the potential that some portion of the nutrients will be lost prior to crop uptake in the spring. In order to minimize the risk of nutrient loss, recommendations are often based on soil temperature, since biological activity has been shown to decrease...

  3. Soil temperature regulates nitrogen loss from lysimeters following fall and winter manure application

    USDA-ARS?s Scientific Manuscript database

    Many producers practice fall and winter manure spreading for economic and practical reasons. In order to minimize the risk of nitrogen loss between application and crop uptake in the spring, university extension publications and industry professionals often make recommendations based on soil tempera...

  4. Use of poultry manure for amendment of oil-polluted soils in relation to growth of maize (Zea mays L. )

    SciTech Connect

    Amadi, A. ) Ue Bari, Y. )

    1992-01-01

    The use of poultry manure for amelioration of oil-polluted soil was investigated by growing maize (Zea mays L.) under two experimental conditions: increasing the poultry manure rate from 0-20 kg ha{sup {minus}1} at 0.03 L/kg oil treatment level; and increasing the rate of oil treatment from 0-0.2 between the rate of poultry manure added and the enhancement of maize growth. But only a 16-kg ha{sup {minus}1} poultry manure rate and above exerted some beneficial effects on the maize growth relative to the unpolluted, unamended soil. Conversely, increasing oil concentration, regardless of the poultry manure level added, depressed maize growth, but only at oil levels of 0.03 L/kg. A positive correlation was recorded between maize height and leaf area growing in oil-treated soil amended with different poultry manure rates and growing in oil-treated amended with 20 kg ha{sup {minus}1} poultry manure. Amending oil-contaminated soils with poultry manure, should possibly improve soil fertility and maize production.

  5. Agricultural management explains historic changes in regional soil carbon stocks.

    PubMed

    van Wesemael, Bas; Paustian, Keith; Meersmans, Jeroen; Goidts, Esther; Barancikova, Gabriela; Easter, Mark

    2010-08-17

    Agriculture is considered to be among the economic sectors having the greatest greenhouse gas mitigation potential, largely via soil organic carbon (SOC) sequestration. However, it remains a challenge to accurately quantify SOC stock changes at regional to national scales. SOC stock changes resulting from SOC inventory systems are only available for a few countries and the trends vary widely between studies. Process-based models can provide insight in the drivers of SOC changes, but accurate input data are currently not available at these spatial scales. Here we use measurements from a soil inventory dating from the 1960s and resampled in 2006 covering the major soil types and agricultural regions in Belgium together with region-specific land use and management data and a process-based model. The largest decreases in SOC stocks occurred in poorly drained grassland soils (clays and floodplain soils), consistent with drainage improvements since 1960. Large increases in SOC in well drained grassland soils appear to be a legacy effect of widespread conversion of cropland to grassland before 1960. SOC in cropland increased only in sandy lowland soils, driven by increasing manure additions. Modeled land use and management impacts accounted for more than 70% of the variation in observed SOC changes, and no bias could be demonstrated. There was no significant effect of climate trends since 1960 on observed SOC changes. SOC monitoring networks are being established in many countries. Our results demonstrate that detailed and long-term land management data are crucial to explain the observed SOC changes for such networks.

  6. Agricultural management explains historic changes in regional soil carbon stocks

    PubMed Central

    van Wesemael, Bas; Paustian, Keith; Meersmans, Jeroen; Goidts, Esther; Barancikova, Gabriela; Easter, Mark

    2010-01-01

    Agriculture is considered to be among the economic sectors having the greatest greenhouse gas mitigation potential, largely via soil organic carbon (SOC) sequestration. However, it remains a challenge to accurately quantify SOC stock changes at regional to national scales. SOC stock changes resulting from SOC inventory systems are only available for a few countries and the trends vary widely between studies. Process-based models can provide insight in the drivers of SOC changes, but accurate input data are currently not available at these spatial scales. Here we use measurements from a soil inventory dating from the 1960s and resampled in 2006 covering the major soil types and agricultural regions in Belgium together with region-specific land use and management data and a process-based model. The largest decreases in SOC stocks occurred in poorly drained grassland soils (clays and floodplain soils), consistent with drainage improvements since 1960. Large increases in SOC in well drained grassland soils appear to be a legacy effect of widespread conversion of cropland to grassland before 1960. SOC in cropland increased only in sandy lowland soils, driven by increasing manure additions. Modeled land use and management impacts accounted for more than 70% of the variation in observed SOC changes, and no bias could be demonstrated. There was no significant effect of climate trends since 1960 on observed SOC changes. SOC monitoring networks are being established in many countries. Our results demonstrate that detailed and long-term land management data are crucial to explain the observed SOC changes for such networks. PMID:20679194

  7. Ice nucleation properties of agricultural soil dusts

    NASA Astrophysics Data System (ADS)

    Steinke, Isabelle; Funk, Roger; Busse, Jacqueline; Iturri, Antonela; Kirchen, Silke; Leue, Martin; Möhler, Ottmar; Schwartz, Thomas; Sierau, Berko; Toprak, Emre; Ulrich, Andreas; Hoose, Corinna; Leisner, Thomas

    2015-04-01

    Soil dust particles emitted from agricultural areas contain large amounts of organic material such as fungi, bacteria and plant debris. Being carrier for potentially highly ice-active biological particles, agricultural soil dusts are candidates for being very ice-active as well. In this work, we present ice nucleation experiments conducted in the AIDA cloud chamber. We investigated the ice nucleation efficiency of four types of soil dust from different regions of the world. Results are presented for the immersion freezing and the deposition nucleation mode: all soil dusts show higher ice nucleation efficiencies than desert dusts, especially at temperatures above 254 K. For one soil dust sample, the effect of heat treatments was investigated. Heat treatments did not affect the ice nucleation efficiency which presumably excludes primary biological particles as the only source of the increased ice nucleation efficiency. Therefore, organo-mineral complexes or organic compounds may contribute substantially to the high ice nucleation activity of agricultural soil dusts.

  8. Biochar and manure affect calcareous soil and corn silage nutrient concentrations and uptake.

    PubMed

    Lentz, R D; Ippolito, J A

    2012-01-01

    Carbon-rich biochar derived from the pyrolysis of biomass can sequester atmospheric CO, mitigate climate change, and potentially increase crop productivity. However, research is needed to confirm the suitability and sustainability of biochar application to different soils. To an irrigated calcareous soil, we applied stockpiled dairy manure (42 Mg ha dry wt) and hardwood-derived biochar (22.4 Mg ha), singly and in combination with manure, along with a control, yielding four treatments. Nitrogen fertilizer was applied when needed (based on preseason soil test N and crop requirements) in all plots and years, with N mineralized from added manure included in this determination. Available soil nutrients (NH-N; NO-N; Olsen P; and diethylenetriaminepentaacetic acid-extractable K, Mg, Na, Cu, Mn, Zn, and Fe), total C (TC), total N (TN), total organic C (TOC), and pH were evaluated annually, and silage corn nutrient concentration, yield, and uptake were measured over two growing seasons. Biochar treatment resulted in a 1.5-fold increase in available soil Mn and a 1.4-fold increase in TC and TOC, whereas manure produced a 1.2- to 1.7-fold increase in available nutrients (except Fe), compared with controls. In 2009 biochar increased corn silage B concentration but produced no yield increase; in 2010 biochar decreased corn silage TN (33%), S (7%) concentrations, and yield (36%) relative to controls. Manure produced a 1.3-fold increase in corn silage Cu, Mn, S, Mg, K, and TN concentrations and yield compared with the control in 2010. The combined biochar-manure effects were not synergistic except in the case of available soil Mn. In these calcareous soils, biochar did not alter pH or availability of P and cations, as is typically observed for acidic soils. If the second year results are representative, they suggest that biochar applications to calcareous soils may lead to reduced N availability, requiring additional soil N inputs to maintain yield targets.

  9. Yield, quality, and concentration of seven heavy metals in cabbage and broccoli grown in sewage sludge and chicken manure amended soil.

    PubMed

    Antonious, George F; Kochhar, Tejinder S; Coolong, Timothy

    2012-01-01

    The mobility of heavy metals from soil into the food chain and their subsequent bioaccumulation has increased the attention they receive as major environmental pollutants. The objectives of this investigation were to: i) study the impact of mixing native agricultural soil with municipal sewage sludge (SS) or chicken manure (CM) on yield and quality of cabbage and broccoli, ii) quantify the concentration of seven heavy metals (Cd, Cr, Mo, Cu, Zn, Pb, and Ni) in soil amended with SS or CM, and iii) determine bioavailability of heavy metals to cabbage leaves and broccoli heads at harvest. Analysis of the two soil amendments used in this investigation indicated that Cr, Ni, Cu, Zn, Mo, Cd, Pb, and organic matter content were significantly greater (P < 0.05) in premixed sewage sludge than premixed chicken manure. Total cabbage and broccoli yields obtained from SS and CM mixed soil were both greater than those obtained from no-mulch (bare) soil. Concentration of Ni in cabbage leaves of plants grown in soil amended with CM was low compared to plants grown in no-mulch soil. No significant differences were found in Cd and Pb accumulation between cabbage and broccoli. Concentrations of Ni, Cu, Zn, and Mo were greater in broccoli than cabbage. Total metals and plant available metals were also determined in the native and amended soils. Results indicated that the concentration of heavy metals in soils did not necessary reflect metals available to plants. Regardless of soil amendments, the overall bioaccumulation factor (BAF) of seven heavy metals in cabbage leaves and broccoli heads revealed that cabbage and broccoli were poor accumulators of Cr, Ni, Cu, Cd, and Pb (BAF <1), while BAF values were >1 for Zn and Mo. Elevated Ni and Mo bioaccumulation factor (BAF >1) of cabbage grown in chicken manure mixed soil is a characteristic that would be less favorable when cabbage is grown on sites having high concentrations of these two metals.

  10. Impacts of swine manure application and land management on microbial communities and resistance genes in soils and drainage waters

    USDA-ARS?s Scientific Manuscript database

    Administration of in-feed antibiotics have been observed to lead to increased concentrations of antibiotics and antibiotic resistant bacteria in swine manure. Since swine manure is often used as a fertilizer in agriculture, there is concern that antibiotics and resistance genes introduced into the a...

  11. Rainfall timing and frequency influence on leaching of Escherichia coli RS2G through soil following manure application.

    PubMed

    Saini, R; Halverson, L J; Lorimor, J C

    2003-01-01

    The time between swine (Sus scrofa) manure application to soil as a crop fertilizer, the first rainfall event, and the frequency of rainfall events should influence leaching potential of fecal pathogens. Soil microcosms were inoculated in the lab with a swine manure isolate of Escherichia coli, strain RS2G, expressing green fluorescent protein, to examine how timing and frequency of rainfall events influences RS2G leaching and survival in soil. Liquid swine manure inoculated with RS2G was applied to intact soil cores (20 cm in diameter x 30 cm long) 4, 8, or 16 d before the first rainfall event (50.8 mm over a 4-h period), and each core received one to three rainfall events. Manure application methods (no-till surface-broadcast, broadcast and incorporated, and tilled before broadcast) had no affect on leaching, although there was greater survival in soils when the manure had been incorporated. Most of the RS2G in the leachate appeared following the first rainfall event and RS2G leaching decreased with increasing time between manure application and the first rainfall, although leachates contained as much as 3.4 to 4.5 log colony forming units (CFU) 100 mL(-1) of RS2G when the first rainfall occurred 16 d after manure application. With increasing frequency of rainfalls there was a decrease in subsequent concentrations of RS2G in the leachate. There was no correlation between leachate RS2G and total coliforms or fecal streptococci concentrations. Soil RS2G numbers were 1 to 10% of the inoculum regardless of the length of time between manure application and the first rainfall. RS2G leaching was mostly influenced by the time between manure application and first rainfall event, and significant leaching and survival in soil was possible even if the first rain occurred 16 d after manure application.

  12. Survival and Persistence of Nonpathogenic Escherichia coli and Attenuated Escherichia coli O157:H7 in Soils Amended with Animal Manure in a Greenhouse Environment.

    PubMed

    Sharma, Manan; Millner, Patricia D; Hashem, Fawzy; Camp, Mary; Whyte, Celia; Graham, Lorna; Cotton, Corrie P

    2016-06-01

    Animal manure provides benefits to agriculture but may contain pathogens that contaminate ready-to-eat produce. U.S. Food and Drug Administration standards include 90- or 120-day intervals between application of manure and harvest of crop to minimize risks of pathogen contamination of fresh produce. Data on factors affecting survival of Escherichia coli in soils under greenhouse conditions are needed. Three separate studies were conducted to evaluate survival of nonpathogenic E. coli (gEc) and attenuated E. coli O157:H7 (attO157) inoculated at either low (4 log CFU/ml) or high (6 log CFU/ml) populations over 56 days. Studies involved two pot sizes (small, 398 cm(3); large, 89 liters), three soil types (sandy loam, SL; clay loam, CL; silt loam, SIL), and four amendments (poultry litter, PL; dairy manure liquids, DML; horse manure, HM; unamended). Amendments were applied to the surface of the soil in either small or large containers. Study 1, conducted in regularly irrigated small containers, showed that populations of gEc and attO157 (2.84 to 2.88 log CFU/g) in PL-amended soils were significantly (P < 0.05) greater than those in DML-amended (0.29 to 0.32 log CFU/g [dry weight] [gdw]) or unamended (0.25 to 0.28 log CFU/gdw) soils; soil type did not affect E. coli survival. Results from study 2, in large pots with CL and SIL, showed that PL-amended soils supported significantly higher attO157 and gEc populations compared with HM-amended or unamended soils. Study 3 compared results from small and large containers that received high inoculum simultaneously. Overall, in both small and large containers, PLamended soils supported higher gEc and attO157 populations compared with HM-amended and unamended soils. Populations of attO157 were significantly greater in small containers (1.83 log CFU/gdw) than in large containers (0.65 log CFU/gdw) at week 8, perhaps because small containers received more regular irrigation than large pots. Regular irrigation of small pots may have

  13. Intensive agriculture reduces soil biodiversity across Europe.

    PubMed

    Tsiafouli, Maria A; Thébault, Elisa; Sgardelis, Stefanos P; de Ruiter, Peter C; van der Putten, Wim H; Birkhofer, Klaus; Hemerik, Lia; de Vries, Franciska T; Bardgett, Richard D; Brady, Mark Vincent; Bjornlund, Lisa; Jørgensen, Helene Bracht; Christensen, Sören; Hertefeldt, Tina D'; Hotes, Stefan; Gera Hol, W H; Frouz, Jan; Liiri, Mira; Mortimer, Simon R; Setälä, Heikki; Tzanopoulos, Joseph; Uteseny, Karoline; Pižl, Václav; Stary, Josef; Wolters, Volkmar; Hedlund, Katarina

    2015-02-01

    Soil biodiversity plays a key role in regulating the processes that underpin the delivery of ecosystem goods and services in terrestrial ecosystems. Agricultural intensification is known to change the diversity of individual groups of soil biota, but less is known about how intensification affects biodiversity of the soil food web as a whole, and whether or not these effects may be generalized across regions. We examined biodiversity in soil food webs from grasslands, extensive, and intensive rotations in four agricultural regions across Europe: in Sweden, the UK, the Czech Republic and Greece. Effects of land-use intensity were quantified based on structure and diversity among functional groups in the soil food web, as well as on community-weighted mean body mass of soil fauna. We also elucidate land-use intensity effects on diversity of taxonomic units within taxonomic groups of soil fauna. We found that between regions soil food web diversity measures were variable, but that increasing land-use intensity caused highly consistent responses. In particular, land-use intensification reduced the complexity in the soil food webs, as well as the community-weighted mean body mass of soil fauna. In all regions across Europe, species richness of earthworms, Collembolans, and oribatid mites was negatively affected by increased land-use intensity. The taxonomic distinctness, which is a measure of taxonomic relatedness of species in a community that is independent of species richness, was also reduced by land-use intensification. We conclude that intensive agriculture reduces soil biodiversity, making soil food webs less diverse and composed of smaller bodied organisms. Land-use intensification results in fewer functional groups of soil biota with fewer and taxonomically more closely related species. We discuss how these changes in soil biodiversity due to land-use intensification may threaten the functioning of soil in agricultural production systems.

  14. Occurrence of 13 veterinary drugs in animal manure-amended soils in Eastern China.

    PubMed

    Wei, Ruicheng; Ge, Feng; Zhang, Lili; Hou, Xiang; Cao, Yinan; Gong, Lan; Chen, Ming; Wang, Ran; Bao, Endong

    2016-02-01

    The occurrence of 13 veterinary drugs were studied in soil fertilized with animal manures in Eastern China. The 69 soil samples were obtained from twenty-three vegetable fields in 2009 and analysed for selected veterinary drugs by HPLC-MS/MS at soil depths of 0-20, 20-40 and 40-60 cm, and two additional samples were re-analysed from an earlier study from November 2011. Results showed that animal wastes, especially those from poultry farms, were one of pollution sources of veterinary drugs in soil. The detection frequency of veterinary drugs in soil was 83%, 91% and 87% in the three soil depths, respectively. The detection rates for the five classes of drugs in soils followed the rank order cyromazine > tetracyclines > sulfonamides > fluoroquinolones > florfenicol. Veterinary drugs were detected in soil layers at 20-40 and 40-60 cm depth to a greater extent than at 0-20 cm depth. The results of the same point in years 2009 and 2011 indicated that veterinary drugs accumulate easily and persist in the deeper soil. In addition, residue levels of veterinary drugs in soil were related to the animal species the manure was derived from. Overall, the predominance of tetracyclines in sampled soils underscored the need to regulate their veterinary use in order to improve the management and treatment of associated releases.

  15. Immobilization of Cd in landfill-leachate-contaminated soil with cow manure compost as soil conditioners: A laboratory study.

    PubMed

    Liao, Zhuwei; Wang, Jia; Wan, Rui; Xi, Shuang; Chen, Zhuqi; Chen, Zhulei; Yu, Yingjian; Long, Sijie; Wang, Huabin

    2016-12-01

    Introducing cow manure compost as an amendment in landfill-leachate-contaminated soils is proved to be an effective technique for the immobilization of Cd in this study. Landfill-leachate-contaminated soil was collected from an unlined landfill in China and amended with a different blending quantity of cow manure compost (0, 12, 24, 36, and 48 g per 200 g soil), which was made by mixing cow manure and chaff at a ratio of 1/1 and maturing for 6 months. pH values of five different blending quantity mixtures increased by 0.2-0.4, and the organic matter levels increased by 2.5-7%, during a remediation period of 5 weeks. Four fractions of Cd named exchangeable Cd, reducible Cd, oxidizable Cd, and residual Cd in soil were respectively analyzed by a sequential extraction procedure. Introducing the cow manure compost application resulted in more than 40% lower exchangeable Cd but a higher concentration of oxidizable Cd in soils, and mass balance results showed nearly no Cd absorption by applied material, indicating that transformation of exchangeable Cd into oxidization forms was the main mechanism of Cd immobilization when cow manure compost was used as an amendment. The Pearson correlation showed that increasing of pH values significantly improved the efficiency of Cd immobilization, with a correlation coefficiency of 0.940 (p < 0.05). This is the first attempt at heavy metal immobilization in landfill-leachate-contaminated soil by cow manure compost, and findings of this work can be integrated to guide the application. Addition of cow manure compost (CMC) was effective in reducing exchangeable Cd in landfill-leachate-contaminated soils (LLCS). The immobilization effect of Cd was mainly assigned to the redistribution of labile soil Cd. Organic matter (OM) and pH value increased with CMC application. The pH values were more sensitive to Cd immobilization efficiency. It was proved that CMC can be safely and effectively used for the restoration of LLCS.

  16. Do drying and rewetting cycles modulate effects of sulfadiazine spiked manure in soil?

    PubMed

    Jechalke, Sven; Radl, Viviane; Schloter, Michael; Heuer, Holger; Smalla, Kornelia

    2016-05-01

    Naturally occurring drying-rewetting events in soil have been shown to affect the dissipation of veterinary antibiotics entering soil by manure fertilization. However, knowledge of effects on the soil microbial community structure and resistome is scarce. Here, consequences of drying-rewetting cycles on effects of sulfadiazine (SDZ) in soil planted with Dactylis glomerata L. were investigated in microcosms. Manure containing SDZ or not was applied to the pregrown grass and incubated for 56 days in a climate chamber. Water was either added daily or reduced during two drying events of 7 days, each followed by a recovery phase. Total community DNA was analyzed to reveal the effects on the bacterial community structure and on the abundance of sul1, sul2, intI1 ,intI2, qacE+qacEΔ1, traN and korB genes relative to 16S rRNA genes. 16S rRNA gene-based DGGE fingerprints indicated that drying-rewetting cycles modulated the effects of SDZ on the bacterial community structure in the soil. Furthermore, the SDZ treatment increased the relative abundance of sulfonamide resistance and integrase genes compared to the control. However, this increase was not different between moisture regimes, indicating that drying-rewetting had only a negligible effect on the selection of the resistome by SDZ in the manured soil.

  17. Estimation of decay rates for fecal indicator bacteria and bacterial pathogens in agricultural field-applied manure

    EPA Science Inventory

    Field-applied manure is an important source of pathogenic exposure in surface water bodies for humans and ecological receptors. We analyzed the persistence and decay of fecal indicator bacteria and bacterial pathogens from three sources (cattle, poultry, swine) for agricultural f...

  18. Estimation of decay rates for fecal indicator bacteria and bacterial pathogens in agricultural field-applied manure

    EPA Science Inventory

    Field-applied manure is an important source of pathogenic exposure in surface water bodies for humans and ecological receptors. We analyzed the persistence and decay of fecal indicator bacteria and bacterial pathogens from three sources (cattle, poultry, swine) for agricultural f...

  19. Long-term manure amendment increases organic C storage and stabilization in Loess soil

    NASA Astrophysics Data System (ADS)

    Liang, B.; Zhao, W.; Yang, X.; Zhou, J.

    2011-12-01

    Soil is the largest terrestrial pool for organic carbon in the biosphere. Therefore, sequestration of C in soils is often seen as a 'win-win' proposition. The long-term combined application of manure with chemical fertilizers had increased the accumulation of organic carbon in soil (SOC); and the results from the application of chemical fertilizers on the stock of SOC in soil were inconsistent. Furthermore, less studies have been conducted to evaluate the effect of different fertilization, especially the application of N fertilizer, on the stabilization of SOC in the different fertilized soils. In this study, we hypothesized that the long-term different fertilization not only affect organic C storage, but also its stabilization in soil. Therefore, we conducted an incubation experiment with the soils from a long-term fertilization trials. Soil samples were collected from the three fertilized plots, ((1) no fertilizer, NF soil, (2) inorganic NPK fertilizers, NPK soil; and (3) Manure + NPK fertilizers, MNPK soil) of a long-term fertilization experiment initiated in 1990 in Shaanxi, China. The soils were incubated at 28o C for 30 days with the different treatments, i.e., (1) control with no addition (CK), (2) added 200 mg N kg-1 soil (+ NH4-N), (3) added 1000 mg C kg-1 soil (+ glucose), and (4) added 200 mg N kg-1 soil + 1000 mg C kg-1 soil (+glucose + NH4-N). The evolved CO2 was determined by titration of the excess NaOH with 0.1 M HCl. Decomposition of SOC in the different soils was evaluate with the accumulation of released CO2-C based on dry soil (in mg C kg-1 soil), and the decomposition rate of SOC during the incubation (in % of total organic C in soil). Long-term different fertilization treatments (NPK, and MNPK soil) significantly increased the organic C storage in 0-100 cm soil profile. SOC storage in MNPK soil (83.0 t ha-1) was significantly higher than NPK soil (80.8 t ha-1), and both were significantly higher than the no fertilizer soil. The decomposition

  20. Geographic information system based manure application plan.

    PubMed

    Basnet, Badri B; Apan, Armando A; Raine, Steven R

    2002-02-01

    A geographic information system (GIS) based manure application plan has been developed for the site-specific application of animal waste to agricultural fields in the Westbrook sub-catchment of the Murray-Darling Basin, south-east Queensland, Australia. Sites suitable for animal waste application were identified using a GIS based weighted linear combination (WLC) model. The degree of land suitability for animal waste application was determined using a range of social, economic, environmental, and agricultural factors. As eutrophication and toxic blue-green algae blooms are a known problem in the catchment, the manure application rates were limited to the rate of crop phosphorus removal. Maximum manure application rate was calculated spatially by taking the crop nutrient (P2O5) requirement and the manure nutrient (P2O5) content into account. The environmental suitability of the fields receiving animal waste was considered in prescribing the final application rate of solid and liquid manures generated by local animal production facilities. The degree of site suitability of the agricultural fields was also used to suggest manure management practices to minimise the socio-environmental risks and increase the nutrient use efficiency of the applied manure. The amount of ammonium nitrogen (NH4-N) that would be added to the soil by satisfying the P2O5 requirement using manure sources was also calculated and an applied NH4-N map was created. This map could be used to assist farmers identify additional nitrogen requirements after manure application.

  1. Transport of manure-borne testosterone in soils affected by artificial rainfall events.

    PubMed

    Qi, Yong; Zhang, Tian C

    2016-04-15

    Information is very limited on fate and transport of steroidal hormones in soils. In this study, the rainfall simulation tests were conducted with a soil slab reactor to investigate the transport of manure-borne testosterone in a silty-clay loam soil under six controllable operation conditions (i.e., three rainfall intensities and two tillage practices). The properties [e.g., rainwater volume, particle size distribution (PSD)] of the slurry samples collected in runoff and leachate at different time intervals were measured; their correlation with the distribution of testosterone among runoff, leachate and soil matrix was analyzed. The results indicated that more than 88% of the testosterone was held by the applied manure and/or soil matrix even under the rainfall intensity of 100-year return frequency. The runoff facilitated testosterone transport through both dissolved and particle-associated phases, with the corresponding mass ratio being ∼7 to 3. Soil particles collected through runoff were mainly silt-sized aggregates (STA) and clays, indicating the necessity of using partially-dispersed soil particles as testing materials to conduct batch tests (e.g., sorption/desorption). No testosterone was detected at the soil depth >20 cm or in the leachate samples, indicating that transport of testosterone through the soil is very slow when there is no preferential flow. Tillage practice could impede the transport of testosterone in runoff. For the first time, results and the methodologies of this study allow one to quantify the hormone distribution among runoff, leachate and soil matrix at the same time and to obtain a comprehensive picture of the F/T of manure-borne testosterone in soil-water environments.

  2. Cadmium availability and uptake by radish (Raphanus sativus) grown in soils applied with wheat straw or composted pig manure.

    PubMed

    Shan, Hong; Su, Shiming; Liu, Rongle; Li, Shutian

    2016-08-01

    Soil cadmium (Cd) availability and uptake by cherry-red radish (Raphanus sativus) grown in Cd-contaminated soils after addition with wheat straw or composted pig manure were studied. The results indicated that wheat straw application promoted radish growth until the second harvest, while pig manure application improved radish biomass in Acid Ferralsols regardless of harvesting seasons. Application with pig manure might be more effective in lowering the Cd uptake by radish than wheat straw. Especially when pig manure of 11.9 g TOC kg(-1) amended into Acid Ferralsols, Cd contents in leaves and roots of radish decreased by 89.2 and 95.7 % at the second harvest, respectively. The changes in Cd fractions distribution in soils after application were contributed to the decline of Cd availability. Furthermore, significantly negative linear correlation (P < 0.05) between the ratio of humic acid (HA) and fulvic acid (FA) in soils and exchangeable Cd was also observed. However, the significantly negative relationship (P < 0.01) between soil pH and exchangeable Cd was merely found in pig manure-treated Acid Ferralsols. The increases in HA/FA ratio or pH values in soils after adding organic materials were also responsible for the decrease of Cd availability in soils and uptake by radish. Thus, it is recommended to stabilize soil Cd and reducing plant uptake by application with composted manure without or slightly contaminated with metals.

  3. Does manure management affect the latent greenhouse gas emitting potential of livestock manures?

    PubMed

    Pratt, Chris; Redding, Matthew; Hill, Jaye; Jensen, Paul D

    2015-12-01

    With livestock manures being increasingly sought as alternatives to costly synthetic fertilisers, it is imperative that we understand and manage their associated greenhouse gas (GHG) emissions. Here we provide the first dedicated assessment into how the GHG emitting potential of various manures responds to the different stages of the manure management continuum (e.g., from feed pen surface vs stockpiled). The research is important from the perspective of manure application to agricultural soils. Manures studied included: manure from beef feedpen surfaces and stockpiles; poultry broiler litter (8-week batch); fresh and composted egg layer litter; and fresh and composted piggery litter. Gases assessed were methane (CH4) and nitrous oxide (N2O), the two principal agricultural GHGs. We employed proven protocols to determine the manures' ultimate CH4 producing potential. We also devised a novel incubation experiment to elucidate their N2O emitting potential; a measure for which no established methods exist. We found lower CH4 potentials in manures from later stages in their management sequence compared with earlier stages, but only by a factor of 0.65×. Moreover, for the beef manures this decrease was not significant (P<0.05). Nitrous oxide emission potential was significantly positively (P<0.05) correlated with C/N ratios yet showed no obvious relationship with manure management stage. Indeed, N2O emissions from the composted egg manure were considerably (13×) and significantly (P<0.05) higher than that of the fresh egg manure. Our study demonstrates that manures from all stages of the manure management continuum potentially entail significant GHG risk when applied to arable landscapes. Efforts to harness manure resources need to account for this. Copyright © 2015 Elsevier Ltd. All rights reserved.

  4. Exploration of composted cereal waste and poultry manure for soil restoration.

    PubMed

    Gaind, Sunita; Nain, Lata

    2010-05-01

    Poultry manure and fungal consortium developed by including fungi of genus Aspergillus, Trichoderma and Phanerochaete were evaluated separately to degrade high silica paddy straw. The quality evaluation of composted organic wastes after two months of decomposition revealed that poultry manure amended paddy straw compost had a C:N ratio of 13.06 and germination index of 132%, compared to 15.29 and 114% of its fungal inoculated counterpart. Supplementation of paddy straw with poultry manure was as effective as its bioaugmentation with fungal consortium. The incorporation of poultry manure @ 3 t ha(-1) (T3) and poultry manure amended paddy straw compost @ 3 t ha(-1)+N(60)P(40)K(30) (T4) separately to soil under rice crop for two consecutive years, resulted in improved microbial biomass and different enzymatic activities responsible for nutrient cycling. T3 and T4 treatments recorded a grain yield improvement of 54.87 and 79.26% respectively in 2007 and 79 and 80.2% respectively in 2008 compared to N(120)P(80)K(60). Copyright 2009 Elsevier Ltd. All rights reserved.

  5. Future trends in soil cadmium concentration under current cadmium fluxes to European agricultural soils.

    PubMed

    Six, L; Smolders, E

    2014-07-01

    The gradual increase of soil cadmium concentrations in European soils during the 20th century has prompted environmental legislation to limit soil cadmium (Cd) accumulation. Mass balances (input-output) reflecting the period 1980-1995 predicted larger Cd inputs via phosphate (P) fertilizers and atmospheric deposition than outputs via crop uptake and leaching. This study updates the Cd mass balance for the agricultural top soils of EU-27+Norway (EU-27+1). Over the past 15 years, the use of P fertilizers in the EU-27+1 has decreased by 40%. The current mean atmospheric deposition of Cd in EU is 0.35 g Cd ha(-1) yr(-1), this is strikingly smaller than values used in the previous EU mass balances (~3 g Cd ha(-1) yr(-1)). Leaching of Cd was estimated with most recent data of soil solution Cd concentrations in 151 soils, which cover the range of European soil properties. No significant time trends were found in the data of net applications of Cd via manure, compost, sludge and lime, all being small sources of Cd at a large scale. Modelling of the future long-term changes in soil Cd concentrations in agricultural top soils under cereal or potato culture predicts soil Cd concentrations to decrease by 15% over the next 100 years in an average scenario, with decreasing trends in some scenarios being more prevalent than increasing trends in other scenarios. These Cd balances have reverted from the general positive balances estimated 10 or more years ago. Uncertainty analysis suggests that leaching is the most uncertain relative to other fluxes. Copyright © 2014 Elsevier B.V. All rights reserved.

  6. Dechlorination of polychlorinated biphenyl-contaminated soil via anaerobic composting with pig manure.

    PubMed

    Zhang, Chi; Du, Yao; Tao, Xiao-Qing; Zhang, Kun; Shen, Dong-Sheng; Long, Yu-Yang

    2013-10-15

    Anaerobic dechlorination is an effective degradation pathway of higher chlorinated polychlorinated biphenyls (PCBs). The efficiency of anaerobic composting remediation of PCB-contaminated soil using pig manure was determined. The results show that the dechlorination of PCB-contaminated soil via anaerobic composting with pig manure is feasible. PCB concentration is the most critical factor. Elevated PCB concentrations can inhibit dechlorination but does not disrupt the anaerobic fermentation process. At 1 mg kg(-1) PCBs, the degradation rate of five or more chlorinated biphenyls is 43.8%. The highest dechlorination performance in this experiment was obtained when the soil-to-organic waste ratio, carbon-to-nitrogen ratio, moisture content, and PCB concentration were 2:3, 20, 60%, and 1 mg kg(-1), respectively.

  7. Dissipation of polycyclic aromatic hydrocarbons from soil added with manure or vermicompost.

    PubMed

    Alvarez-Bernal, D; García-Díaz, E L; Contreras-Ramos, S M; Dendooven, L

    2006-11-01

    The dissipation of three PAHs, i.e., 500 mg phenanthrene kg(-1) soil, 350 mg anthracene kg(-1) soil and 150 mg benzo(a)pyrene kg(-1) soil, was investigated in soil from Acolman (México) added with cow manure or vermicompost while production of CO(2) and inorganic N was monitored. At day 0, recovery of added phenanthrene was 95%, anthracene 96% and benzo(a)pyrene 100% in sterilized soil and concentrations did not change significantly in sterilized soil over time. Application of organic material did not affect the concentration of phenanthrene and anthracene, which decreased sharply in the unsterilized soil in the first weeks of the incubation. Less than 3% of the added phenanthrene was detected after 100 days and less than 8.5% of the added anthracene (mean of the two experiments). The decrease in concentration of benzo(a)pyrene (BaP) was not fast as that of phenathrene and anthracene, and 22% was extractable from soil still after 100days. It was concluded that addition of farm yard manure (FYM) and vermicompost only had an effect on the initial dissipation of phenanthrene, anthracene and benzo(a)pyrene in soil of Acolman.

  8. Effects of pyrolysis char from various feed stocks on survivability of Salmonella enterica and E. coli 0157:H7 in agriculture soils

    USDA-ARS?s Scientific Manuscript database

    Control of foodborne pathogenic bacteria in agricultural soils is a major concern for vegetable growers. Pathogenic bacteria can enter soil through a variety of vectors including; manure used for fertilizer, contaminated water, animals and farmers. A technology has surfaced in recent years through...

  9. The green manure value of seven clover species grown as annual crops on low and high fertility temperate soils.

    SciTech Connect

    Ross, Shirley M.; King, Jane R.; Izaurralde, Roberto C.; O'Donovan, John T.

    2009-05-01

    Annual and perennial clover species may differ in green manure value. Seven clover (Trifolium) species were grown as annual crops on low fertility (Breton) and high fertility 15 (Edmonton) soils in Alberta

  10. Use of sulfadimethoxine in intensive calf farming: evaluation of transfer to stable manure and soil.

    PubMed

    De Liguoro, Marco; Poltronieri, Carlo; Capolongo, Francesca; Montesissa, Clara

    2007-06-01

    After prophylactic treatment of 50 calves with 62mgkg(-1)day(-1) of sulfadimethoxine (SDM) for five days, the levels of the drug over time were followed in feces, bedding and stable manure, and then in the soil of a manured field and surrounding drainage courses. Analysis were done by HPLC after applying to the different matrices a quick and simple extraction procedure. The half-life of the drug in bedding was very short (24h). In stable manure the degradation rate of the drug slowed down and the calculated half-life was 64 days, with 390microgkg(-1) of SDM still detectable after three months maturation. However, in a five months matured stable manure obtained from other groups of calves subjected to the same prophylactic treatment, levels of SDM were <50muicrokg(-1) (LOD of the analytical method). After field fertilization with this manure, no traces of SDM were found in soil (LOD 10microgkg(-1)) or in the water (LOD 2microgl(-1)) from the surrounding drainage courses. Using the internationally recognised DAPHTOXKIT-Ftrade mark, a SDM toxicity test toward Daphnia magna was performed in the range 10-100mgl(-1). The test gave negative results both after 24 and 48h, confirming that microcrustaceans are less sensitive than other models to the toxicity of antibacterials. However, based on data from other authors, concerning algal toxicity and microbial inhibition, and on the analytical results from the current field study, the calculated worst-case EC50/PEC ratio for SDM both in freshwater and in soil was still >1000.

  11. Transport, fate, and infectivity of Cryptosporidium parvum oocysts released from manure and leached through macroporous soil

    NASA Astrophysics Data System (ADS)

    Boyer, Douglas G.; Kuczynska, Ewa; Fayer, Ron

    2009-09-01

    A major mode of transmission of Cryptosporidium parvum, a widespread waterborne pathogen, is via contaminated drinking and recreational waters. Oocyst transport to surface water can occur by deposition of manure directly in the water or by wash off in surface runoff. Oocyst transport to groundwater is less straightforward and requires that the oocysts move through soil and bedrock to reach the water table. The purpose of this study was to determine the relative concentration and infectivity of C. parvum oocysts released from manure and leached through columns of undisturbed, macroporous karst soil. Modeling the fate of oocysts in this system over time can provide baseline data for evaluating real world events. Substantially more oocysts leached from undisturbed soil columns than disturbed soil columns. Oocyst survival studies using BALB/c neonatal suckling mice showed that about 85% of oocysts were infective at the beginning of leaching experiments. The oocyst infectivity decreased to about 20% after 12 weeks of leaching from soil columns maintained at 10°C. Cool (10°C) temperatures appear to increase survivability and maintain infectivity of many oocysts for 3 months or longer. Cool temperatures also appear to increase rates of release of oocysts from manure and leaching through soil. This study demonstrated that leaching is an important mechanism of oocyst transport in karst soils where infiltration capacities are high and long, continuous macropores exist. Karst groundwater systems might be especially vulnerable to contamination by leached oocysts, because of the prevalence of shallow soils and rapid groundwater movement. Oocysts leaching from soils into the epikarst could accumulate and remain viable for months until hydrological conditions are right for flushing the oocysts into the conduit flow system.

  12. The fate of fertilizer nitrogen in a high nitrate accumulated agricultural soil.

    PubMed

    Quan, Zhi; Huang, Bin; Lu, Caiyan; Shi, Yi; Chen, Xin; Zhang, Haiyang; Fang, Yunting

    2016-02-12

    Well-acclimatized nitrifiers in high-nitrate agricultural soils can quickly nitrify NH4(+) into NO3(-) subject to leaching and denitrifying loss. A 120-day incubation experiment was conducted using a greenhouse soil to explore the fates of applied fertilizer N entering into seven soil N pools and to examine if green manure (as ryegrass) co-application can increase immobilization of the applied N into relatively stable N pools and thereby reduce NO3(-) accumulation and loss. We found that 87-92% of the applied (15)N-labelled NH4(+) was rapidly recovered as NO3(-) since day 3 and only 2-4% as microbial biomass and soil organic matter (SOM), while ryegrass co-application significantly decreased its recovery as NO3(-) but enhanced its recovery as SOM (17%) at the end of incubation. The trade-off relationship between (15)N recoveries in microbial biomass and SOM indicated that ryegrass co-application stabilized newly immobilized N via initial microbial uptake and later breakdown. Nevertheless, ryegrass application didn't decrease soil total NO3(-) accumulation due to its own decay. Our results suggest that green manure co-application can increase immobilization of applied N into stable organic N via microbial turnover, but the quantity and quality of green manure should be well considered to reduce N release from itself.

  13. The fate of fertilizer nitrogen in a high nitrate accumulated agricultural soil

    PubMed Central

    Quan, Zhi; Huang, Bin; Lu, Caiyan; Shi, Yi; Chen, Xin; Zhang, Haiyang; Fang, Yunting

    2016-01-01

    Well-acclimatized nitrifiers in high-nitrate agricultural soils can quickly nitrify NH4+ into NO3− subject to leaching and denitrifying loss. A 120-day incubation experiment was conducted using a greenhouse soil to explore the fates of applied fertilizer N entering into seven soil N pools and to examine if green manure (as ryegrass) co-application can increase immobilization of the applied N into relatively stable N pools and thereby reduce NO3− accumulation and loss. We found that 87–92% of the applied 15N-labelled NH4+ was rapidly recovered as NO3− since day 3 and only 2–4% as microbial biomass and soil organic matter (SOM), while ryegrass co-application significantly decreased its recovery as NO3− but enhanced its recovery as SOM (17%) at the end of incubation. The trade-off relationship between 15N recoveries in microbial biomass and SOM indicated that ryegrass co-application stabilized newly immobilized N via initial microbial uptake and later breakdown. Nevertheless, ryegrass application didn’t decrease soil total NO3− accumulation due to its own decay. Our results suggest that green manure co-application can increase immobilization of applied N into stable organic N via microbial turnover, but the quantity and quality of green manure should be well considered to reduce N release from itself. PMID:26868028

  14. The fate of fertilizer nitrogen in a high nitrate accumulated agricultural soil

    NASA Astrophysics Data System (ADS)

    Quan, Zhi; Huang, Bin; Lu, Caiyan; Shi, Yi; Chen, Xin; Zhang, Haiyang; Fang, Yunting

    2016-02-01

    Well-acclimatized nitrifiers in high-nitrate agricultural soils can quickly nitrify NH4+ into NO3- subject to leaching and denitrifying loss. A 120-day incubation experiment was conducted using a greenhouse soil to explore the fates of applied fertilizer N entering into seven soil N pools and to examine if green manure (as ryegrass) co-application can increase immobilization of the applied N into relatively stable N pools and thereby reduce NO3- accumulation and loss. We found that 87-92% of the applied 15N-labelled NH4+ was rapidly recovered as NO3- since day 3 and only 2-4% as microbial biomass and soil organic matter (SOM), while ryegrass co-application significantly decreased its recovery as NO3- but enhanced its recovery as SOM (17%) at the end of incubation. The trade-off relationship between 15N recoveries in microbial biomass and SOM indicated that ryegrass co-application stabilized newly immobilized N via initial microbial uptake and later breakdown. Nevertheless, ryegrass application didn’t decrease soil total NO3- accumulation due to its own decay. Our results suggest that green manure co-application can increase immobilization of applied N into stable organic N via microbial turnover, but the quantity and quality of green manure should be well considered to reduce N release from itself.

  15. Organic matter composition of soil macropore surfaces under different agricultural management practices

    NASA Astrophysics Data System (ADS)

    Glæsner, Nadia; Leue, Marin; Magid, Jacob; Gerke, Horst H.

    2016-04-01

    Understanding the heterogeneous nature of soil, i.e. properties and processes occurring specifically at local scales is essential for best managing our soil resources for agricultural production. Examination of intact soil structures in order to obtain an increased understanding of how soil systems operate from small to large scale represents a large gap within soil science research. Dissolved chemicals, nutrients and particles are transported through the disturbed plow layer of agricultural soil, where after flow through the lower soil layers occur by preferential flow via macropores. Rapid movement of water through macropores limit the contact between the preferentially moving water and the surrounding soil matrix, therefore contact and exchange of solutes in the water is largely restricted to the surface area of the macropores. Organomineral complex coated surfaces control sorption and exchange properties of solutes, as well as availability of essential nutrients to plant roots and to the preferentially flowing water. DRIFT (Diffuse Reflectance infrared Fourier Transform) Mapping has been developed to examine composition of organic matter coated macropores. In this study macropore surfaces structures will be determined for organic matter composition using DRIFT from a long-term field experiment on waste application to agricultural soil (CRUCIAL, close to Copenhagen, Denmark). Parcels with 5 treatments; accelerated household waste, accelerated sewage sludge, accelerated cattle manure, NPK and unfertilized, will be examined in order to study whether agricultural management have an impact on the organic matter composition of intact structures.

  16. Persistence of Shiga toxin-producing Escherichia coli O26 in various manure-amended soil types.

    PubMed

    Fremaux, B; Prigent-Combaret, C; Delignette-Muller, M L; Mallen, B; Dothal, M; Gleizal, A; Vernozy-Rozand, C

    2008-01-01

    To evaluate the behaviour of Shiga toxin-producing Escherichia coli (STEC) O26 strains inoculated in manure-amended soils under in vitro conditions. Four green fluorescent protein (GFP)-labelled STEC O26 strains were inoculated in duplicate (at 10(6) CFU g(-1)) in three different manure-amended soil types, including two loam soils (A and B) and one clay loam soil (C), and two incubation temperatures (4 and 20 degrees C) were tested. STEC counts and soil physical parameters were periodically monitored. STEC O26 cells were able to persist during extended periods in soil even in the presence of low moisture levels, i.e. less than 0 x 08 g H2O g(-1) dry soil. At 4 and 20 degrees C, STEC could be detected in soil A for 288 and 196 days, respectively, and in soils B and C for at least 365 days postinoculation at both temperatures. The ambient temperature (i.e. 20 degrees C) was significantly associated with the highest STEC count decline in all soils tested. The temperature and soil properties appear to be contributory factors affecting the long-term survival of STEC O26 in manure-amended soils. This study provides useful information regarding the ecology of STEC O26 in manure-amended soils and may have implications for land and waste management.

  17. Effects of pig manure and wheat straw on growth of mung bean seedlings grown in aluminium toxicity soil.

    PubMed

    Shen, Q R; Shen, Z G

    2001-02-01

    Crop production in red soil areas may be limited by Al toxicity. A possible alternative to ameliorate Al toxicity is the application of such organic manure as crop straw and animal manure. A pot experiment was conducted to investigate the effects of organic materials on the alleviation of Al toxicity in acid red soil. Ground wheat straw, pig manure or CaCO3 were mixed with the soil and incubated, at 85% of water holding capacity and 25 degrees C, for 8 weeks. After the incubation, 14 seedlings of mung bean (Phaseolus aures Roxb) were allowed to grow for 12 days. Results showed that application of organic material or CaCO3 increased soil pH and decreased soil monomeric inorganic Al concentrations. Growth of mung bean seedling was improved sustantially by the application of organic material or CaCO3. Pig manure or wheat straw was more effective in ameliorating Al toxicity than was CaCO3. Mung bean plants receiving pig manure or wheat straw contained relatively high concentrations of P, Ca and K in their leaves. It is suggested that the beneficial effect of organic manure on mung bean is likely due to decreasing concentrations of monomeric inorganic Al concentrations in soil solution and improvement of mineral nutrition.

  18. Chicken manure biochar as liming and nutrient source for acid Appalachian soil.

    PubMed

    Hass, Amir; Gonzalez, Javier M; Lima, Isabel M; Godwin, Harry W; Halvorson, Jonathan J; Boyer, Douglas G

    2012-01-01

    Acid weathered soils often require lime and fertilizer application to overcome nutrient deficiencies and metal toxicity to increase soil productivity. Slow-pyrolysis chicken manure biochars, produced at 350 and 700°C with and without subsequent steam activation, were evaluated in an incubation study as soil amendments for a representative acid and highly weathered soil from Appalachia. Biochars were mixed at 5, 10, 20, and 40 g kg into a Gilpin soil (fine-loamy, mixed, active, mesic Typic Hapludult) and incubated in a climate-controlled chamber for 8 wk, along with a nonamended control and soil amended with agronomic dolomitic lime (AgLime). At the end of the incubation, soil pH, nutrient availability (by Mehlich-3 and ammonium bicarbonate diethylene triamine pentaacetic acid [AB-DTPA] extractions), and soil leachate composition were evaluated. Biochar effect on soil pH was process- and rate-dependent. Biochar increased soil pH from 4.8 to 6.6 at the high application rate (40 g kg), but was less effective than AgLime. Biochar produced at 350°C without activation had the least effect on soil pH. Biochar increased soil Mehlich-3 extractable micro- and macronutrients. On the basis of unit element applied, increase in pyrolysis temperature and biochar activation decreased availability of K, P, and S compared to nonactivated biochar produced at 350°C. Activated biochars reduced AB-DTPA extractable Al and Cd more than AgLime. Biochar did not increase NO in leachate, but increased dissolved organic carbon, total N and P, PO, SO, and K at high application rate (40 g kg). Risks of elevated levels of dissolved P may limit chicken manure biochar application rate. Applied at low rates, these biochars provide added nutritional value with low adverse impact on leachate composition. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  19. Escherichia coli Contamination of Vegetables Grown in Soils Fertilized with Noncomposted Bovine Manure: Garden-Scale Studies

    PubMed Central

    Ingham, Steven C.; Losinski, Jill A.; Andrews, Matthew P.; Breuer, Jane E.; Breuer, Jeffry R.; Wood, Timothy M.; Wright, Thomas H.

    2004-01-01

    In this study we tested the validity of the National Organic Program (NOP) requirement for a ≥120-day interval between application of noncomposted manure and harvesting of vegetables grown in manure-fertilized soil. Noncomposted bovine manure was applied to 9.3-m2 plots at three Wisconsin sites (loamy sand, silt loam, and silty clay loam) prior to spring and summer planting of carrots, radishes, and lettuce. Soil and washed (30 s under running tap water) vegetables were analyzed for indigenous Escherichia coli. Within 90 days, the level of E. coli in manure-fertilized soil generally decreased by about 3 log CFU/g from initial levels of 4.2 to 4.4 log CFU/g. Low levels of E. coli generally persisted in manure-fertilized soil for more than 100 days and were detected in enriched soil from all three sites 132 to 168 days after manure application. For carrots and lettuce, at least one enrichment-negative sample was obtained ≤100 days after manure application for 63 and 88% of the treatments, respectively. The current ≥120-day limit provided an even greater likelihood of not detecting E. coli on carrots (≥1 enrichment-negative result for 100% of the treatments). The rapid maturation of radishes prevented conclusive evaluation of a 100- or 120-day application-to-harvest interval. The absolute absence of E. coli from vegetables harvested from manure-fertilized Wisconsin soils may not be ensured solely by adherence to the NOP ≥120-day limit. Unless pathogens are far better at colonizing vegetables than indigenous E. coli strains are, it appears that the risk of contamination for vegetables grown in Wisconsin soils would be elevated only slightly by reducing the NOP requirement to ≥100 days. PMID:15528501

  20. Improvement of Soil Ecosystem Multifunctionality by Dissipating Manure-Induced Antibiotics and Resistance Genes.

    PubMed

    Liang, Yuting; Pei, Meng; Wang, Dandan; Cao, Shengnan; Xiao, Xian; Sun, Bo

    2017-05-02

    The application of animal manure containing antibiotic residues to farmlands as an organic fertilizer causes a long-term potential threat to the ecological environment of farmland. This study analyzed the effects of abating typical antibiotics and resistance genes (ARGs) applied with pig manure on farmland soil as well as on soil ecosystem multifunctionality (EMF) and its influencing factor. The results showed that Lolium multiflorum exhibited significantly stronger abatement of typical antibiotics and ARGs when combined with biochar than when used alone (p < 0.05). The dissipation of antibiotics significantly enhanced the soil functions (respiratory, ammonification, and nitrification activities) (p < 0.05). A structural equation model was established to explore the effects of abating antibiotics and ARGs in different treatment systems on soil EMF. The treatment of plant roots with ryegrass alone and in combination with biochar exerted direct positive effects on the physical structure and EMF (p < 0.001). The improvement in soil physical structure directly promoted the abatement of antibiotics and ARGs (p < 0.01). Soil pH and trace elements exerted weaker effects on antibiotics and ARGs after the application of biochar. Plant roots were the most important factor in promoting the EMF of soil containing antibiotics and ARGs.

  1. Fate and transport of testosterone in agricultural soils.

    PubMed

    Casey, Francis X M; Hakk, Heldur; Simůnek, Jirí; Larsen, Gerald L

    2004-02-01

    Hormones excreted in animal waste have been measured in surface and groundwater associated with manure that is applied to the land surface. Limited studies have been done on the fate and transport of androgenic hormones in soils. In this study, batch and column experiments were used to identify the fate and transport of radiolabeled [14C] testosterone in agricultural soils. The batch results indicated that aqueous-phase concentrations decreased for the first 5 h and then appeared to increase through time. The first-order sorption kinetics ranged from 0.08 to 0.640 h(-1) for the first 5 h. Beyond 5 h the increase in aqueous 14C could have been caused by desorption of testosterone back into the aqueous phase. However, metabolites were also produced beyond 5 h and would have likely resulted in the increase in aqueous 14C by sorption site competition and/or by lower sorption affinity. There were weak correlations of sorption with soil particle size, organic matter, and specific surface area. Testosterone was the dominant compound present in the soil column effluents, and a fully kinetic-sorption, chemical nonequilibrium model was used to describe the data. Column experiment sorption estimates were lower than the batch, which resulted from rate-limiting sorption due to the advective transport. The column degradation coefficients (0.404-0.600 h(-1)) were generally higher than values reported in the literature for 17beta-estradiol. Although it was found that testosterone degraded more readily than 17beta-estradiol, it appeared to have a greater potential to migrate in the soil because it was not as strongly sorbed. This study underlined the importance of the simultaneous transformation and sorption processes in the transport of hormones through soils.

  2. Survival of generic E. coli and surrogate E. coli O157:H7 in manure-amended soils

    USDA-ARS?s Scientific Manuscript database

    Introduction: Recently released U.S. FDA standards state that untreated biological soil amendments must be applied to soil 9 months before produce crop harvest to reduce pathogen contamination risk on produce. Manure and soil type may impact survival of bacterial pathogens. Purpose: Determine survi...

  3. Long-term effects of sustained beef feedlot manure application on soil nutrients, corn silage yield, and nutrient uptake.

    PubMed

    Ferguson, Richard B; Nienaber, John A; Eigenberg, Roger A; Woodbury, Brian L

    2005-01-01

    A field study was initiated in 1992 to investigate the long-term impacts of beef feedlot manure application (composted and uncomposted) on nutrient accumulation and movement in soil, corn silage yield, and nutrient uptake. Two application strategies were compared: providing the annual crop nitrogen (N) requirement (N-based rate) or crop phosphorus (P) removal (P-based rate), as well as a comparison to inorganic fertilizer. Additionally, effects of a winter cover crop were evaluated. Irrigated corn (Zea mays L.) was produced annually from 1993 through 2002. Average silage yield and crop nutrient removal were highest with N-based manure treatments, intermediate with P-based manure treatments, and least with inorganic N fertilizer. Use of a winter cover crop resulted in silage yield reductions in four of ten years, most likely due to soil moisture depletion in the spring by the cover crop. However, the cover crop did significantly reduce NO3-N accumulation in the shallow vadose zone, particularly in latter years of the study. The composted manure N-based treatment resulted in significantly greater soil profile NO3-N concentration and higher soil P concentration near the soil surface. The accounting procedure used to calculate N-based treatment application rates resulted in acceptable soil profile NO3-N concentrations over the short term. While repeated annual manure application to supply the total crop N requirement may be acceptable for this soil for several years, sustained application over many years carries the risk of unacceptable soil P concentrations.

  4. Effect of passivator on Cu form transformation in pig manure aerobic composting and application in soil.

    PubMed

    Lu, Xiao-Ming; Lu, Peng-Zhen; Chen, Jian-Jun; Zhang, Hui; Fu, Jie

    2015-10-01

    A sequential extraction approach was used to evaluate the effects of various combinations of passivators (sepiolite, phosphate rock, and coal fly ash) on the concentration and speciation of Cu in swine manure aerobic compost along with soil to which the compost had been applied. The results indicate that the various passivators altered the bound forms of Cu in pig manure and soil; the concentrations of exchangeable and Fe-Mn-bound Cu decreased, whereas the residual Cu concentration increased, indicating that Cu transformed to low-availability forms after the passivator treatments. The concentrations of the carbonate-bound and organic-bound Cu varied widely. Among all treatments, the treatment of the control + straw + sepiolite + coal fly ash (2.5 %) + phosphate rock (5.0 %) resulted in the most efficient passivation of Cu; the percentage of residual Cu reached 3.91-21.14 %, obviously surpassing the percentage for the control without passivation. The treatment of the control + straw + sepiolite + phosphate rock (2.5 %) resulted in the lowest residual Cu fraction (0.85 %) among passivator treatments. These results show that the addition of suitable combinations of passivators to the composting process reduced the availability of Cu and the risk of Cu pollution during the application of composted pig manure to soil. Passivation also decreased the Cu content of Apium graveolens.

  5. Gaseous nitrogen and bacterial responses to raw and digested dairy manure applications in incubated soil.

    PubMed

    Saunders, Olivia E; Fortuna, Ann-Marie; Harrison, Joe H; Cogger, Craig G; Whitefield, Elizabeth; Green, Tonia

    2012-11-06

    A study was conducted under laboratory conditions to compare rates of nitrous oxide (N(2)O) and ammonia (NH(3)) emissions when soil was amended with anaerobically digested dairy manure slurry containing <30% food byproducts, raw dairy manure slurry, or urea. Slurries were applied via surface and subsurface methods. A second objective was to correlate genes regulating nitrification and denitrification with rates of N(2)O production, slurry treatment, and application method. Ammonia volatilization from incubated soil ranged from 140 g kg(-1) of total N applied in digested slurry to 230 g kg(-1) in urea. Subsurface application of raw dairy manure slurry decreased ammonia volatilization compared with surface application. Anaerobic digestion increased N(2)O production. Cumulative N(2)O loss averaged 27 g kg(-1) of total N applied for digested slurry, compared with 5 g kg(-1) for raw dairy slurry. Genes of interest included a 16S rRNA gene selective for β-subgroup proteobacterial ammonia-oxidizers, amoA, narG, and nosZ quantified with quantitative polymerase chain reaction (qPCR) and real-time polymerase chain reaction (RT-PCR). Application of anaerobically digested slurry increased nitrifier and denitrifier gene copies that correlated with N(2)O production. Expression of all genes measured via mRNA levels was affected by N applications to soil. This study provides new information linking genetic markers in denitrifier and nitrifier populations to N(2)O production.

  6. Persistence of Escherichia coli and Salmonella in surface soil following application of liquid hog manure for production of pickling cucumbers.

    PubMed

    Côté, Caroline; Quessy, Sylvain

    2005-05-01

    Liquid hog manure is routinely applied to farm land as a crop fertilizer. However, this practice raises food safety concerns, especially when manure is used on fruit and vegetable crops. The objectives of this project were to evaluate the persistence of Escherichia coli and Salmonella in surface soil after application of liquid hog manure to fields where pickling cucumbers were grown and to verify the microbiological quality of harvested cucumbers. Mineral fertilizers were replaced by liquid hog manure at various ratios in the production of pickling cucumbers in a 3-year field study. The experimental design was a randomized complete block comprising four replicates in sandy loam (years 1, 2, and 3) and loamy sand (year 3). Soil samples were taken at a depth of 20 cm every 2 weeks after June application of organic and inorganic fertilizers. Vegetable samples were also taken at harvest time. Liquid hog manure, soil, and vegetable (washed and unwashed) samples were analyzed for the presence of Salmonella and E. coli. An exponential decrease of E. coli populations was observed in surface soil after the application of manure. The estimated average time required to reach undetectable concentrations of E. coli in sandy loam varied from 56 to 70 days, whereas the absence of E. coli was estimated at 77 days in loamy sand. The maximal Salmonella persistence in soil was 54 days. E. coli and Salmonella were not detected in any vegetable samples.

  7. How can soil organic carbon stocks in agriculture be maintained or increased?

    NASA Astrophysics Data System (ADS)

    Don, Axel; Leifeld, Jens

    2015-04-01

    CO2 emissions from soils are 10 times higher than anthropogenic CO2 emissions from fossil burning with around 60 Pg C a-1. At the same time around 60 Pg of carbon is added to the soils as litter from roots and leaves. Thus, the balance between both fluxes is supposed to be zero for the global earth system in steady state without human perturbations. However, the global carbon flux has been altered by humans since thousands of years by extracting biomass carbon as food, feed and fiber with global estimate of 40% of net primary productivity (NPP). This fraction is low in forests but agricultural systems, in particular croplands, are systems with a high net exported carbon fraction. Soils are mainly input driven systems. Agricultural soils depend on input to compensate directly for i) respiration losses, ii) extraction of carbon (and nitrogen) and depletion (e.g. via manure) or indirectly via enhances NPP (e.g. via fertilization management). In a literature review we examined the role of biomass extraction and carbon input via roots, crop residues and amendments (manure, slurry etc.) to agricultural soil's carbon stocks. Recalcitrance of biomass carbon was found to be of minor importance for long-term carbon storage. Thus, also the impact of crop type on soil carbon dynamics seems mainly driven by the amount of crop residuals of different crop types. However, we found distinct differences in the efficiency of C input to refill depleted soil C stocks between above ground C input or below ground root litter C input, with root-C being more efficient due to slower turnover rates. We discuss the role of different measures to decrease soil carbon turnover (e.g. decreased tillage intensity) as compared to measures that increase C input (e.g. cover crops) in the light of global developments in agricultural management with ongoing specialization and segregation between catch crop production and dairy farms.

  8. Application of wastewater from paper and food seasoning industries with green manure to increase soil organic carbon: a laboratory study.

    PubMed

    Lin, Chin-Ching; Arun, A B; Rekha, P D; Young, Chiu-Chung

    2008-09-01

    This laboratory scale experiment was designed to study the suitability of organic wastes from paper and food seasoning industries to improve the soil organic carbon for rice cultivation. Lignin-rich wastewater from paper industry and nitrogen-rich effluent from a food industry at suitably lower concentrations were used at two levels of green manure to enhance the soil organic carbon fraction over time. Both the groups of soils with or without Sesbania were incubated under submerged condition at 25 degrees C for 15 days. Wastewaters from paper industry (WP), food industry (WS), and a combination of WP+WS were added separately to both the treatment groups in flasks. After 103 days of incubation, from all the three treatments and control, total organic carbon and alkali-soluble organic carbon fractions were analyzed. Results indicated that in all the three treatments containing green manure amended with industrial wastewaters, the organic carbon content increased significantly. The alkali-soluble organic carbon fraction was increased by 59% in the soil amended with green manure containing WS and by 31% in the treatment without green manure compared to control. The paper mill waste water namely, WP, increased the organic carbon only in the soil containing green manure by 63%. The combined treatment of WP+WS with green manure increased alkali-soluble organic carbon fraction by 90% compared to control, while in the treatment without green manure, the organic carbon increase was 71%. Overall, the combined treatment WP+WS with green manure could increase the alkali-soluble organic carbon fraction more than all other treatments. Hence, wastewater rich in organics from paper and food industries can be efficiently used to temporarily increase the soil organic carbon content.

  9. Traditional agricultural practices enable sustainable remediation of highly polluted soils in Southern Spain for cultivation of food crops.

    PubMed

    Madejón, P; Barba-Brioso, C; Lepp, N W; Fernández-Caliani, J C

    2011-07-01

    This study relates elemental content of a range of edible crops grown in soils severely polluted by metals and metalloids as affected by traditional smallholder management practices. Five agricultural plots close to a sulfidic waste dump were monitored. Soil analysis demonstrated elevated concentrations of As, Cu, Pb and Zn that were greatly in excess of maximum statutory limits for agricultural soils in the studied region. The main vegetables (lettuce, chard, onion, potatoes) and lemon, together with their associated soils, were measured for elemental content. Extractable soil element concentrations were very low. There were differences in elemental accumulation between crops, but none exceeded statutory concentrations in edible parts. Soil-plant transfer factors were uniformly low for all elements and crops. It is concluded that traditional soil management practices (annual liming and application of animal manures) have created conditions for sustainable long-term safety use, with potential for multiple end-use, of these highly polluted soils.

  10. Emission factors for organic fertilizer-induced N2O emissions from Japanese agricultural soils

    NASA Astrophysics Data System (ADS)

    Sano, T.; Nishina, K.; Sudo, S.

    2013-12-01

    1. Introduction Agricultural fields are significant sources of nitrous oxide (N2O), which is one of the important greenhouse gases with a contribution of 7.9% to the anthropogenic global warming (IPCC, 2007). Direct fertilizer-induced N2O emission from agricultural soil is estimated using the emission factor (EF). National greenhouse gas inventory of Japan defines direct EF for N2O associated with the application of chemical and organic fertilizers as the same value (0.62%) in Japanese agricultural fields. However, it is necessary to estimate EF for organic fertilizers separately, because there are some differences in factors controlling N2O emissions (e.g. nutrient content) between chemical and organic fertilizers. The purpose of this study is to estimate N2O emissions and EF for applied organic fertilizers in Japanese agricultural fields. 2. Materials and Methods We conducted the experiments at 10 prefectural agricultural experimental stations in Japan (Yamagata, Fukushima, Niigata, Ibaraki, Aichi, Shiga, Tokushima, Nagasaki, Kumamoto, and Kagoshima) to consider the variations of cultivation and environmental conditions among regions. Field measurements had been conducted for 2-2.5 years during August 2010-April 2013. Each site set experimental plots with the applications of composted manure (cattle, swine, and poultry), chemical fertilizer, and non-nitrogen fertilizer as a control. The annual amount of applied nitrogen ranged from 16 g-N m-2 y-1 to 60 g-N m-2 y-1 depending on cropping system and cultivated crops (e.g. cabbage, potato) at each site. N2O fluxes were measured using a closed-chamber method. N2O concentrations of gas samples were measured with gas chromatography. The EF value of each fertilizer was calculated as the N2O emission from fertilizer plots minus the background N2O emission (emission from a control plot), and was expressed as a percentage of the applied nitrogen. The soil NH4+ and NO3-, soil temperature, precipitation, and WFPS (water

  11. Prevalence of antibiotic resistance genes and bacterial pathogens in long-term manured greenhouse soils as revealed by metagenomic survey.

    PubMed

    Fang, Hua; Wang, Huifang; Cai, Lin; Yu, Yunlong

    2015-01-20

    Antibiotic resistance genes (ARGs), human pathogenic bacteria (HPB), and HPB carrying ARGs pose a high risk to soil ecology and public health. Here, we used a metagenomic approach to investigate their diversity and abundance in chicken manures and greenhouse soils collected from Guli, Pulangke, and Hushu vegetable bases with different greenhouse planting years in Nanjing, Eastern China. There was a positive correlation between the levels of antibiotics, ARGs, HPB, and HPB carrying ARGs in manures and greenhouse soils. In total, 156.2–5001.4 μg/kg of antibiotic residues, 22 classes of ARGs, 32 HPB species, and 46 species of HPB carrying ARGs were found. The highest relative abundance was tetracycline resistance genes (manures) and multidrug resistance genes (greenhouse soils). The dominant HPB and HPB carrying ARGs in the manures were Bacillus anthracis, Bordetella pertussis, and B. anthracis (sulfonamide resistance gene, sul1), respectively. The corresponding findings in greenhouse soils were Mycobacterium tuberculosis and M. ulcerans, M. tuberculosis (macrolide-lincosamide-streptogramin resistance protein, MLSRP), and B. anthracis (sul1), respectively. Our findings confirmed high levels of antibiotics, ARGs, HPB, and HPB carrying ARGs in the manured greenhouse soils compared with those in the field soils, and their relative abundance increased with the extension of greenhouse planting years.

  12. The effect of soil management on the persistence of E. coli and Listeria spp. in manure- amended soils in the Northeast United States

    USDA-ARS?s Scientific Manuscript database

    Introduction: Enterohemorrhagic Escherichia coli and Listeria monocytogenes can contaminate leafy greens through inappropriately managed raw manure applied to soils. Current FDA guidance includes calling for additional scientific data to determine the appropriate interval between application of man...

  13. Plant-available and water-soluble phosphorus in soils amended with separated manure solids.

    PubMed

    Gasser, M-O; Chantigny, M H; Angers, D A; Bittman, S; Buckley, K E; Rochette, P; Massé, D

    2012-01-01

    Physical, chemical, or biological treatment of animal liquid manure generally produces a dry-matter rich fraction (DMF) that contains most of the initial phosphorus (P). Our objective was to assess the solubility and plant availability of P from various DMFs as a function of soil P status. Eight different DMFs were obtained from liquid swine (LSM) and dairy cattle (LDC) manures treated by natural decantation, anaerobic digestion, chemical flocculation, composting, or mechanical separation. The DMFs were compared with mineral P fertilizer in a pot experiment with oat ( L.) grown in four soils with varied P-fixing capacities and P saturation levels. The DMFs were added at a rate of 50 mg P kg soil and incubated 14 d before seeding. Soil water-extractable P (P) at all water:soil extraction ratios (2:1, 20:1, and 200:1) was slightly higher when DMFs were derived from LDC rather than LSM. Soil P at the 2:1 ratio was lower with anaerobically digested LSM. At the 2:1 extraction ratio, DMF P was less soluble than mineral P as P saturation in soils increased. In soils with a lower P-fixing capacity, DMF P appeared less water soluble than mineral P under 20:1 and 200:1 extraction ratios. After 72 d of plant growth, DMFs produced yields comparable to mineral P fertilizer. Although the plant availability of P from DMFs was comparable to mineral P fertilizer, P from DMFs could be less vulnerable to leaching or runoff losses in soils with a high P saturation level or low P-fixing capacity. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  14. Runoff losses of excreted chlortetracycline, sulfamethazine, and tylosin from surface-applied and soil-incorporated beef cattle feedlot manure.

    PubMed

    Amarakoon, Inoka D; Zvomuya, Francis; Cessna, Allan J; Degenhardt, Dani; Larney, Francis J; McAllister, Tim A

    2014-03-01

    Veterinary antimicrobials in land-applied manure can move to surface waters via rain or snowmelt runoff, thus increasing their dispersion in agro-environments. This study quantified losses of excreted chlortetracycline, sulfamethazine, and tylosin in simulated rain runoff from surface-applied and soil-incorporated beef cattle ( L.) feedlot manure (60 Mg ha, wet wt.). Antimicrobial concentrations in runoff generally reflected the corresponding concentrations in the manure. Soil incorporation of manure reduced the concentrations of chlortetracycline (from 75 to 12 μg L for a 1:1 mixture of chlortetracycline and sulfamethazine and from 43 to 17 μg L for chlortetracycline alone) and sulfamethazine (from 3.9 to 2.6 μg L) in runoff compared with surface application. However, there was no significant effect of manure application method on tylosin concentration (range, 0.02-0.06 μg L) in runoff. Mass losses, as a percent of the amount applied, for chlortetracycline and sulfamethazine appeared to be independent of their respective soil sorption coefficients. Mass losses of chlortetracycline were significantly reduced with soil incorporation of manure (from 6.5 to 1.7% when applied with sulfamethazine and from 6.5 to 3.5% when applied alone). Mass losses of sulfamethazine (4.8%) and tylosin (0.24%) in runoff were not affected by manure incorporation. Although our results confirm that cattle-excreted veterinary antimicrobials can be removed via surface runoff after field application, the magnitudes of chlortetracycline and sulfamethazine losses were reduced by soil incorporation of manure immediately after application.

  15. Hyperaccumulator oilcake manure as an alternative for chelate-induced phytoremediation of heavy metals contaminated alluvial soils.

    PubMed

    Mani, Dinesh; Kumar, Chitranjan; Patel, Niraj Kumar

    2015-01-01

    The ability of hyperaccumulator oilcake manure as compared to chelates was investigated by growing Calendula officinalis L for phytoremediation of cadmium and lead contaminated alluvial soil. The combinatorial treatment T6 [2.5 g kg(-1) oilcake manure+5 mmol kg(-1) EDDS] caused maximum cadmium accumulation in root, shoot and flower up to 5.46, 4.74 and 1.37 mg kg(-1) and lead accumulation up to 16.11, 13.44 and 3.17 mg kg(-1), respectively at Naini dump site, Allahabad (S3). The treatment showed maximum remediation efficiency for Cd (RR=0.676%) and Pb (RR=0.202%) at Mumfordganj contaminated site (S2). However, the above parameters were also observed at par with the treatment T5 [2.5 g kg(-1) oilcake manure +2 g kg(-1) humic acid]. Applied EDDS altered chlorophyll-a, chlorophyll-b, and carotene contents of plants while application of oilcake manure enhanced their contents in plant by 3.73-8.65%, 5.81-17.65%, and 7.04-17.19%, respectively. The authors conclude that Calendula officinalis L has potential to be safely grown in moderately Cd and Pb-contaminated soils and application of hyperaccumulator oilcake manure boosts the photosynthetic pigments of the plant, leading to enhanced clean-up of the cadmium and lead-contaminated soils. Hence, the hyperaccumulator oilcake manure should be preferred over chelates for sustainable phytoremediation through soil-plant rhizospheric process.

  16. Forms of mercury in Everglades agricultural soils

    SciTech Connect

    Patrick, W.H.; Parkpian, P.; Gambrell, R.P.

    1995-12-31

    Seventeen surface soils from the Florida Everglades Agricultural Area were subjected to selective extraction for water soluble, amorphous iron oxide bound, organic, and residual mercury. Organic bound mercury was the major fraction and represented 51% of the total mercury for the 17 soils studied. Iron oxide bound mercury and water soluble mercury accounted for only 5 percent each of the total mercury. Eight weeks incubation of the soils under aerobic and anaerobic conditions showed little effect of aeration status on the transformations among the various chemical forms.

  17. Effect of manure under different nitrogen application rates on winter wheat production and soil fertility in dryland

    NASA Astrophysics Data System (ADS)

    Zhang, H. Q.; Yu, X. Y.; Zhai, B. N.; Jin, Z. Y.; Wang, Z. H.

    2016-08-01

    Exploring an effective fertilization practice is crucial for achieving a sustainable dryland winter wheat cropping system. Following a split-plot design, this study was conducted to investigate the combined effect of manure (-M or +M; main plot) and various rates of nitrogen (N) fertilizer (0, 75, 150, 225, and 300 kg N ha-1; sub plot) on grain yield, water and N use efficiencies of winter wheat, and soil nutrients. The results showed that the treatments with manure improved the grain yield by 8%, and WUE by 10% relative to that without manure throughout the study years. The highest winter wheat yield and WUE were both recorded in the M+N225 treatment, which were not significantly different from those for M+N75 and M+N150 treatment. In contrast, high levels of N fertilizer (> 150 kg N ha-1) combined with manure not only caused a reduction in the N use efficiency (NUE), but it also caused an increase in the soil residual nitrate-N (from 43.7 to 188.9 kg ha-1) relative to without manure. After three years of continuous cropping, the treatment combining manure with 150 kg N ha-1 fertilizer had the highest SOM, available P and available K, which was 24%, 379% and 102% higher than that for unfertilized treatment (CK), and 10%, 267%, and 55% higher than that for without manure, respectively. Thus, the combination of manure (17.5 t ha-1 poultry or 30 t ha-1 pig manure) with 75-150 kg N ha-1 N fertilizer is recommended for improving winter wheat yield, water and N use efficiencies, and reducing soil nitrate-N residue as well.

  18. Characterization of the resistome in manure, soil and wastewater from dairy and beef production systems

    PubMed Central

    Noyes, Noelle R.; Yang, Xiang; Linke, Lyndsey M.; Magnuson, Roberta J.; Cook, Shaun R.; Zaheer, Rahat; Yang, Hua; Woerner, Dale R.; Geornaras, Ifigenia; McArt, Jessica A.; Gow, Sheryl P.; Ruiz, Jaime; Jones, Kenneth L.; Boucher, Christina A.; McAllister, Tim A.; Belk, Keith E.; Morley, Paul S.

    2016-01-01

    It has been proposed that livestock production effluents such as wastewater, airborne dust and manure increase the density of antimicrobial resistant bacteria and genes in the environment. The public health risk posed by this proposed outcome has been difficult to quantify using traditional microbiological approaches. We utilized shotgun metagenomics to provide a first description of the resistome of North American dairy and beef production effluents, and identify factors that significantly impact this resistome. We identified 34 mechanisms of antimicrobial drug resistance within 34 soil, manure and wastewater samples from feedlot, ranch and dairy operations. The majority of resistance-associated sequences found in all samples belonged to tetracycline resistance mechanisms. We found that the ranch samples contained significantly fewer resistance mechanisms than dairy and feedlot samples, and that the resistome of dairy operations differed significantly from that of feedlots. The resistome in soil, manure and wastewater differed, suggesting that management of these effluents should be tailored appropriately. By providing a baseline of the cattle production waste resistome, this study represents a solid foundation for future efforts to characterize and quantify the public health risk posed by livestock effluents. PMID:27095377

  19. Enhancement of methane production from co-digestion of chicken manure with agricultural wastes.

    PubMed

    Abouelenien, Fatma; Namba, Yuzaburo; Kosseva, Maria R; Nishio, Naomichi; Nakashimada, Yutaka

    2014-05-01

    The potential for methane production from semi-solid chicken manure (CM) and mixture of agricultural wastes (AWS) in a co-digestion process has been experimentally evaluated at thermophilic and mesophilic temperatures. To the best of author(')s knowledge, it is the first time that CM is co-digested with mixture of AWS consisting of coconut waste, cassava waste, and coffee grounds. Two types of anaerobic digestion processes (AD process) were used, process 1 (P1) using fresh CM (FCM) and process 2 (P2) using treated CM (TCM), ammonia stripped CM, were conducted. Methane production in P1 was increased by 93% and 50% compared to control (no AWS added) with maximum methane production of 502 and 506 mL g(-1)VS obtained at 55°C and 35°C, respectively. Additionally, 42% increase in methane production was observed with maximum volume of 695 mL g(-1)VS comparing P2 test with P2 control under 55°C. Ammonia accumulation was reduced by 39% and 32% in P1 and P2 tests. Copyright © 2014 Elsevier Ltd. All rights reserved.

  20. Molecular properties of a fermented manure preparation used as field spray in biodynamic agriculture.

    PubMed

    Spaccini, R; Mazzei, P; Squartini, A; Giannattasio, M; Piccolo, A

    2012-11-01

    Manure products fermented underground in cow horns and commonly used as field spray (preparation 500) in the biodynamic farming system, were characterized for molecular composition by solid-state nuclear magnetic resonance [(13) C cross-polarization magic-angle-spinning NMR ((13) C-CPMAS-NMR)] spectroscopy and offline tetramethylammonium hydroxide thermochemolysis gas chromatography-mass spectrometry. Both thermochemolysis and NMR spectroscopy revealed a complex molecular structure, with lignin aromatic derivatives, polysaccharides, and alkyl compounds as the predominant components. CPMAS-NMR spectra of biodynamic preparations showed a carbon distribution with an overall low hydrophobic character and significant contribution of lignocellulosic derivatives. The results of thermochemolysis confirmed the characteristic highlighted by NMR spectroscopy, revealing a molecular composition based on alkyl components of plant and microbial origin and the stable incorporation of lignin derivatives. The presence of biolabile components and of undecomposed lignin compounds in the preparation 500 should be accounted to its particularly slow maturation process, as compared to common composting procedures. Our results provide, for the first time, a scientific characterization of an essential product in biodynamic agriculture, and show that biodynamic products appear to be enriched of biolabile components and, therefore, potentially conducive to plant growth stimulation.

  1. Transport of agricultural contaminants through karst soil

    USDA-ARS?s Scientific Manuscript database

    Karst landscapes are common in many agricultural regions in the US. Well-developed karst landscapes are characterized by shallow soils, sinkholes, sinking streams, underground conduits, and springs. In these landscapes surface runoff is minimal and most recharge enters the subsurface relatively quic...

  2. Soil Macronutrient Sensing for Precision Agriculture

    USDA-ARS?s Scientific Manuscript database

    Accurate measurements of soil macronutrients (i.e., nitrogen, phosphorus, and potassium) are needed for efficient agricultural production, including site-specific crop management (SSCM), where fertilizer nutrient application rates are adjusted spatially based on local requirements. Rapid, non-destru...

  3. Occurrence of Stenotrophomonas maltophilia in agricultural soils and antibiotic resistance properties.

    PubMed

    Deredjian, Amélie; Alliot, Nolwenn; Blanchard, Laurine; Brothier, Elisabeth; Anane, Makram; Cambier, Philippe; Jolivet, Claudy; Khelil, Mohamed Naceur; Nazaret, Sylvie; Saby, Nicolas; Thioulouse, Jean; Favre-Bonté, Sabine

    2016-05-01

    The occurrence of Stenotrophomonas maltophilia was monitored in organic amendments and agricultural soils from various sites in France and Tunisia. S. maltophilia was detected in horse and bovine manures, and its abundance ranged from 0.294 (±0.509) × 10(3) to 880 (±33.4) × 10(3) CFU (g drywt)(-1) of sample. S. maltophilia was recovered from most tested soil samples (104/124). Its abundance varied from 0.33 (±0.52) to 414 (±50) × 10(3) CFU (g drywt)(-1) of soil and was not related to soil characteristics. Antibiotic resistance properties of a set of environmental strains were compared to a clinical set, and revealed a high diversity of antibiotic resistance profiles, given both the numbers of resistance and the phenotypes. Manure strains showed resistance phenotypes, with most of the strains resisting between 7 and 9 antibiotics. While French soil strains were sensitive to most antibiotics tested, some Tunisian strains displayed resistance phenotypes close to those of clinical French strains. Screening for metal resistance among 66 soil strains showed a positive relationship between antibiotic and metal resistance. However, the prevalence of antibiotic resistance phenotypes in the studied sites was not related to the metal content in soil samples. Copyright © 2016 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

  4. Improving the sustainability of animal agriculture by treating manure with alum

    USDA-ARS?s Scientific Manuscript database

    Two of the biggest environmental problems associated with animal manure management are ammonia emissions and phosphorus (P) runoff. Research conducted during the past two decades has shown that a simple topical application of aluminum sulfate (alum) to manure can greatly reduce the magnitude of bot...

  5. Application of manure containing tetracyclines slowed down the dissipation of tet resistance genes and caused changes in the composition of soil bacteria.

    PubMed

    Xiong, Wenguang; Wang, Mei; Dai, Jinjun; Sun, Yongxue; Zeng, Zhenling

    2017-09-09

    Manure application contributes to the increased environmental burden of antibiotic resistance genes (ARGs). We investigated the response of tetracycline (tet) resistance genes and bacterial taxa to manure application amended with tetracyclines over two months. Representative tetracyclines (oxytetracycline, chlorotetracycline and doxycycline), tet resistance genes (tet(M), tet(O), tet(W), tet(S), tet(Q) and tet(X)) and bacterial taxa in the untreated soil, +manure, and +manure+tetracyclines groups were analyzed. The abundances of all tet resistance genes in the +manure group were significantly higher than those in the untreated soil group on day 1. The abundances of all tet resistance genes (except tet(Q) and tet(X)) were significantly lower in the +manure group than those in the +manure+tetracyclines group on day 30 and 60. The dissipation rates were higher in the +manure group than those in the +manure+tetracyclines group. Disturbance of soil bacterial community composition imposed by tetracyclines was also observed. The results indicated that tetracyclines slowed down the dissipation of tet resistance genes in arable soil after manure application. Application of manure amended with tetracyclines may provide a significant selective advantage for species affiliated to the taxonomical families of Micromonosporaceae, Propionibacteriaceae, Streptomycetaceae, Nitrospiraceae and Clostridiaceae. Copyright © 2017 Elsevier Inc. All rights reserved.

  6. Attachment of Escherichia coli to Soil Aggregates as Affected by Aggregate Water Content and Presence of Manure Constituents

    NASA Astrophysics Data System (ADS)

    Guber, A.; Pachepsky, Y.; Shelton, D. R.; Yu, O.

    2006-12-01

    Many soils contain relatively large structural units that do not slack when soil is being wetted. Soil aggregates, obtained from dry soil samples by sieving, present a model media to study the interactions of intact soils with dissolved or suspended contaminants. Land-applied manures may contain various contaminants that cause water pollution and concomitant health problems. Some of these pollutants are bacteria, and Echerichia coli is widely used as an indicator of bacterial contamination. The objective of this work was to test the hypothesis that Echerichia coli attachment to soil aggregates is affected by aggregate size, aggregate water content, and presence of suspended manure colloids and dissolved organic compounds. Three aggregate fractions of 3.4-4.8 mm, 4.8-7.9 mm and 7.9-9.5 mm diameters were obtained by dry sieving of a loam soil. Air-dry and water-saturated aggregates were submerged in bacteria-water and bacteria-manure suspensions at four E. coli concentrations for 24 h. Amounts of attached E. coli were calculated from the difference between the amount applied and the amount remained in the suspension. Significant differences in E. coli attachment to air-dry and saturated aggregates were found. Both increase in water content and the presence of manure significantly decreased the Echerichia coli attachment to all aggregate fractions regardless of the aggregate size. Because E. coli transport in soil generally occurs through large pores between structural units when rainfall follows manure application, the decrease in bacteria attachment as a result of soil saturation and presence of suspended or dissolved manure components can enhance bacterial mobility and increase risk of ground water contamination.

  7. Changes in soil hydrological and chemical properties of vineyard soils after composted cattle manure application

    NASA Astrophysics Data System (ADS)

    Concepción Ramos, Maria

    2017-04-01

    The aim of this study was to evaluate the changes soil chemical and physical properties (organic matter content, nitrogen and phosphorus, water retention capacity and infiltration) when composted organic waste were applied in vineyard soils. The effect on soil properties after two repeated applications at a rate of 10t/ha compared with the control (without treatment) were evaluated. The analysis was carried out in vineyard soils, located in the Penedès area (NE Spain). In this area, vines are the main agricultural land use and during the last decades, important land levelling operations have been carried out to facilitate the mechanizations of the labours. After levelling, the application of organic matter is a common practice in order to increase the organic matter levels. According to SSS (1998), the soils are classified as Typic Calcixerepts, with slopes between 5 and 15%. Organic matter, nitrogen and phosphorus content were evaluated in one control plot and in another plot in which successive applications of compost were done, separated between them 2 years. The changes in infiltration were evaluated using simulated rainfall, applied at 60 mm/h. The simulated rainfall consisted of 2.5 mm diameter drops of deionised water freely falling from droppers positioned 2.5 m above the soil surface. Each simulation lasted for 40 min. Runoff generated was collected at 5 minute intervals. Differences between treatments were analysed using the Duncan test. The results confirmed the beneficial effect of compost application to improve organic matter and nutrients in the treated soils. The organic matter content increased from 1 to 2.9%; Nitrogen increased from < 1% to 0.25% and P (Olsen) increased from 45 to 164 mg/kg. The infiltration also improved, respectively 13 and 20% after the successive compost application. The effect on water retention capacity was significantly different after the second application. Keywords: compost, infiltration, nutrients, organic matter, water

  8. Impact of long-term tillage and manure application on soil physical properties

    USDA-ARS?s Scientific Manuscript database

    Soil physical properties play an integral role in maintaining soil quality for sustainable agricultural practices. Agronomic practices such as tillage systems and organic amendments have been shown to influence soil physical properties. Thus, a study was conducted to evaluate effects of long-term ma...

  9. Application of rye green manure in wheat rotation system alters soil water content and chemical characteristics under dryland condition in Maragheh.

    PubMed

    Mosavi, S B; Jafarzadeh, A A; Nishabouri, M R; Ostan, Sh; Feiziasl, V

    2009-01-15

    This study was carried out with or without rye green manure along with 4 nitrogen fertilization treatments (0, 26, 103 and 337 (kg N ha(-1)) in 3 rotation system (green manure-wheat). Results showed that, although treatment effects on dryland wheat grain yield was not significant, but maximum grain yield (2484 kg ha(-1)) was obtained from application of rye green manure along with 26 kg N ha(-1); which is 22% more than check (without rye green manure) treatment. Green manure application with or without nitrogen increased EC (dS m(-1)), but decreased OC, P (av.), Cu (av.), Mn (av.), Zn (av.) and sand in the soil. In contrast to green manure, application of nitrogen along with green manure increased saturation and clay. In the stage of stem appearance, soil moisture content decreased 8% in green-manure application but with nitrogen application the moisture increased 6% compared with check in 0-20 cm depth. It can be concluded that, green manure application is useful along with nitrogen fertilizer application in long term. This treatment could increase soil moisture content, which leads to higher wheat grain yield in dryland areas. In addition, green manure application could change some soil characteristics such as soil TNV%, which decreases availability of some essential nutrients for dryland wheat.

  10. The Effects of Cattle Manure and Garlic Rotation on Soil under Continuous Cropping of Watermelon (Citrullus lanatus L.)

    PubMed Central

    Liu, Changming; Wang, Yongqi; Ma, Jianxiang; Zhang, Yong; Li, Hao; Zhang, Xian

    2016-01-01

    Continuous cropping of watermelon (Citrullus lanatus L.) can lead to reduced yield and quality. We aimed to determine the effects of cattle manure addition and rotation with green garlic to improve yield and reduce disease incidence in watermelon and to examine the effects on the biological and chemical characteristics of the soil. Field experiments were performed during 2012–2014 on land previously under two years of continuous watermelon cropping in northwest China. We examined three treatment combinations: watermelon and garlic rotation, cattle manure application before watermelon planting, and combined cattle manure addition and crop rotation. Watermelon monoculture was retained as a control. Watermelon yield was significantly higher and disease incidence was lower in the treatments than the control. The populations of soil bacteria and actinomycetes and the bacteria/fungi ratio increased significantly and soil enzyme activities were generally enhanced under treatments. Available nutrients and soil organic matter contents were much higher under experimental treatments than the control. Results suggest both cattle manure application and garlic rotation can ameliorate the negative effects of continuous cropping. The combined treatment of cattle manure addition and green garlic rotation was optimal to increase yield, reduce disease incidence and enhance soil quality. PMID:27258145

  11. The Effects of Cattle Manure and Garlic Rotation on Soil under Continuous Cropping of Watermelon (Citrullus lanatus L.).

    PubMed

    Yang, Ruiping; Mo, Yanling; Liu, Changming; Wang, Yongqi; Ma, Jianxiang; Zhang, Yong; Li, Hao; Zhang, Xian

    2016-01-01

    Continuous cropping of watermelon (Citrullus lanatus L.) can lead to reduced yield and quality. We aimed to determine the effects of cattle manure addition and rotation with green garlic to improve yield and reduce disease incidence in watermelon and to examine the effects on the biological and chemical characteristics of the soil. Field experiments were performed during 2012-2014 on land previously under two years of continuous watermelon cropping in northwest China. We examined three treatment combinations: watermelon and garlic rotation, cattle manure application before watermelon planting, and combined cattle manure addition and crop rotation. Watermelon monoculture was retained as a control. Watermelon yield was significantly higher and disease incidence was lower in the treatments than the control. The populations of soil bacteria and actinomycetes and the bacteria/fungi ratio increased significantly and soil enzyme activities were generally enhanced under treatments. Available nutrients and soil organic matter contents were much higher under experimental treatments than the control. Results suggest both cattle manure application and garlic rotation can ameliorate the negative effects of continuous cropping. The combined treatment of cattle manure addition and green garlic rotation was optimal to increase yield, reduce disease incidence and enhance soil quality.

  12. Influence of farmyard manure on retention and availability of nickel, zinc and lead in metal-contaminated calcareous loam soils

    USDA-ARS?s Scientific Manuscript database

    Continuous irrigation of crops with untreated municipal effluent can result in the accumulation of nickel (Ni), zinc (Zn), and lead (Pb) in soils and translocation to the plants. Application of farm yard manure (FYM) to metal-contaminated soils may increase or decrease the availability and retention...

  13. Depth-dependent inactivation of Escherichia coli and Enterococcus faecalis in soil after manure application and simulated rainfall

    USDA-ARS?s Scientific Manuscript database

    E.coli and Enterococcus serve as important water quality indicator organisms. Rainfall action on manured fields and pastures releases these organisms into soil with infiltrating water. They can then be released back to runoff during subsequent rainfall or irrigation events as soil solution interacts...

  14. Remediation of degraded arable steppe soils in Moldova using vetch as green manure

    NASA Astrophysics Data System (ADS)

    Wiesmeier, M.; Lungu, M.; Hübner, R.; Cerbari, V.

    2015-01-01

    In the Republic of Moldova, non-sustainable arable farming led to severe degradation and erosion of fertile steppe soils (Chernozems). As a result, the Chernozems lost about 40% of their initial amounts of soil organic carbon (SOC). Aim of this study was to remediate degraded arable soils and promote carbon sequestration by implementation of cover cropping and green manuring in Moldova. Thereby, the suitability of the legume hairy vetch (Vicia sativa) as cover crop under the dry, continental climate of Moldova was examined. At two experimental sites, the effect of cover cropping on chemical and physical soil properties as well as on yields of subsequent main crops was determined. The results showed a significant increase of SOC after incorporation of hairy vetch due to a high above- and belowground biomass production that was related with a high input of carbon and nitrogen. A calculation of SOC stocks based on equivalent soil masses revealed a sequestration of around 3 t C ha-1 yr-1 as a result of hairy vetch cover cropping. The buildup of SOC was associated with an improvement of the soil structure as indicated by a distinct decrease of bulk density and a relative increase of macroaggregates at the expense of microaggregates and clods. As a result, yields of subsequent main crops increased by around 20%. Our results indicated that hairy vetch is a promising cover crop to remediate degraded steppe soils, control soil erosion and sequestrate substantial amounts of atmospheric C in arable soils of Moldova.

  15. Effects of pig manure containing copper and zinc on microbial community assessed via phospholipids in soils.

    PubMed

    Zhang, Yan; Luo, Wei; Jia, Junmei; Kong, Peiru; Tong, Xiaojuan; Lu, Yonglong; Xie, Liqiong; Ma, Fulong; Giesy, John P

    2014-08-01

    Pig manure (PM) is widely used as an organic fertilizer to increase yields of crops. Excessive application of compost containing relatively great concentrations of copper (Cu) and zinc (Zn) can change soil quality. To clarify the effects of different rates of application and to determine the optimal rate of fertilization, PM containing 1,115 mg Cu kg(-1), dry mass (dm) and 1,497 mg Zn kg(-1), dm was applied to alkaline soil at rates of 0, 11, 22, 44, 88, and 222 g PM kg(-1), dm. Phospholipid fatty acids (PLFAs) were used to assess soil microbial community composition. Application of PM resulted in greater concentrations of total nitrogen (TN), NH4 (+)-N, NO3 (-)-N, total carbon (TC), soil organic matter (SOM) but lesser pH values. Soils with application rates of 88-222 g PM kg(-1), dm had concentrations of total and EDTA-extractable Cu and Zn significantly greater than those in soil without PM, and concentrations of T-Cu and T-Zn in these amended soils exceeded maximum limits set by standards in china. Except in the soil with a rate of 11 g PM kg(-1), dm, total bacterial and fungal PLFAs were directly proportional to rate of application of PM. Biomasses of bacteria and fungi were significantly greater in soils with application rates of 44-222 g PM kg(-1), dm than in the soil without PM. SOM, TC and EDTA-Zn had the most direct influence on soil microbial communities. To improve fertility of soils and maintain quality of soil, rate of application should be 22-44 g PM kg(-1) dm, soil containing Cu and Zn.

  16. Effects of Cattle Feeding Regimen and Soil Management Type on the Fate of Escherichia coli O157:H7 and Salmonella enterica Serovar Typhimurium in Manure, Manure-Amended Soil, and Lettuce

    PubMed Central

    Franz, Eelco; van Diepeningen, Anne D.; de Vos, Oscar J.; van Bruggen, Ariena H. C.

    2005-01-01

    Survival of the green fluorescent protein-transformed human pathogens Escherichia coli O157:H7 and Salmonella enterica serovar Typhimurium was studied in a laboratory-simulated lettuce production chain. Dairy cows were fed three different roughage types: high-digestible grass silage plus maize silage (6:4), low-digestible grass silage, and straw. Each was adjusted with supplemental concentrates to high and low crude protein levels. The pathogens were added to manure, which was subsequently mixed (after 56 and 28 days for E. coli O157:H7 and Salmonella serovar Typhimurium, respectively) with two pairs of organically and conventionally managed loamy and sandy soil. After another 14 days, iceberg lettuce seedlings were planted and then checked for pathogens after 21 days of growth. Survival data were fitted to a logistic decline function (exponential for E. coli O157:H7 in soil). Roughage type significantly influenced the rate of decline of E. coli O157:H7 in manure, with the fastest decline in manure from the pure straw diet and the slowest in manure from the diet of grass silage plus maize silage. Roughage type showed no effect on the rate of decline of Salmonella serovar Typhimurium, although decline was significantly faster in the manure derived from straw than in the manure from the diet of grass silage plus maize silage. The pH and fiber content of the manure were significant explanatory factors and were positively correlated with the rate of decline. With E. coli O157:H7 there was a trend of faster decline in organic than in conventional soils. No pathogens were detected in the edible lettuce parts. The results indicate that cattle diet and soil management are important factors with respect to the survival of human pathogens in the environment. PMID:16204535

  17. Effects of cattle feeding regimen and soil management type on the fate of Escherichia coli O157:H7 and salmonella enterica serovar typhimurium in manure, manure-amended soil, and lettuce.

    PubMed

    Franz, Eelco; van Diepeningen, Anne D; de Vos, Oscar J; van Bruggen, Ariena H C

    2005-10-01

    Survival of the green fluorescent protein-transformed human pathogens Escherichia coli O157:H7 and Salmonella enterica serovar Typhimurium was studied in a laboratory-simulated lettuce production chain. Dairy cows were fed three different roughage types: high-digestible grass silage plus maize silage (6:4), low-digestible grass silage, and straw. Each was adjusted with supplemental concentrates to high and low crude protein levels. The pathogens were added to manure, which was subsequently mixed (after 56 and 28 days for E. coli O157:H7 and Salmonella serovar Typhimurium, respectively) with two pairs of organically and conventionally managed loamy and sandy soil. After another 14 days, iceberg lettuce seedlings were planted and then checked for pathogens after 21 days of growth. Survival data were fitted to a logistic decline function (exponential for E. coli O157:H7 in soil). Roughage type significantly influenced the rate of decline of E. coli O157:H7 in manure, with the fastest decline in manure from the pure straw diet and the slowest in manure from the diet of grass silage plus maize silage. Roughage type showed no effect on the rate of decline of Salmonella serovar Typhimurium, although decline was significantly faster in the manure derived from straw than in the manure from the diet of grass silage plus maize silage. The pH and fiber content of the manure were significant explanatory factors and were positively correlated with the rate of decline. With E. coli O157:H7 there was a trend of faster decline in organic than in conventional soils. No pathogens were detected in the edible lettuce parts. The results indicate that cattle diet and soil management are important factors with respect to the survival of human pathogens in the environment.

  18. Impacts of supplementing chemical fertilizers with organic fertilizers manufactured using pig manure as a substrate on the spread of tetracycline resistance genes in soil.

    PubMed

    Kang, Yijun; Hao, Yangyang; Shen, Min; Zhao, Qingxin; Li, Qing; Hu, Jian

    2016-08-01

    Using pig manure (PM) compost as a partial substitute for the conventional chemical fertilizers (CFs) is considered an effective approach in sustainable agricultural systems. This study aimed to analyze the impacts of supplementing CF with organic fertilizers (OFs) manufactured using pig manure as a substrate on the spread of tetracycline resistance genes (TRGs) as well as the community structures and diversities of tetracycline-resistant bacteria (TRB) in bulk and cucumber rhizosphere soils. In this study, three organic fertilizers manufactured using the PM as a substrate, namely fresh PM, common OF, and bio-organic fertilizer (BF), were supplemented with a CF. Composted manures combined with a CF did not significantly increase TRB compared with the CF alone, but PM treatment resulted in the long-term survival of TRB in soil. The use of CF+PM also increased the risk of spreading TRGs in soil. As beneficial microorganisms in BF may function as reservoirs for the spread of antibiotic resistance genes, care should be taken when adding them to the OF matrix. The PM treatment significantly altered the community structures and increased the species diversity of TRB, especially in the rhizosphere soil. BF treatment caused insignificant changes in the community structure of TRB compared with CF treatment, yet it reduced the species diversities of TRB in soil. Thus, the partial use of fresh PM as a substitute for CF could increase the risk of spread of TRGs. Apart from plant growth promotion, BF was a promising fertilizer owing to its potential ability to control TRGs.

  19. Enhancing soil sorption capacity of an agricultural soil by addition of three different organic wastes.

    PubMed

    Rojas, Raquel; Morillo, José; Usero, José; Delgado-Moreno, Laura; Gan, Jay

    2013-08-01

    This study evaluated the ability of three unmodified organic residues (composted sewage sludge, RO1; chicken manure, RO2; and a residue from olive oil production called 'orujillo', RO3) and a soil to sorb six pesticides (atrazine, lindane, alachlor, chlorpyrifos, chlorfenvinphos and endosulfan sulfate) and thereby explored the potential environmental value of these organic residues for mitigating pesticide pollution in agricultural production and removing contaminants from wastewater. Pesticide determination was carried out using gas chromatography coupled with mass spectrometry. Adsorption data were analyzed by the Langmuir and Freundlich adsorption approaches. Experimental results showed that the Freundlich isotherm model best described the adsorption process and that Kf values increased with an increase in organic matter (OM) content of the amended soil. The order of adsorption of pesticides on soils was: chlorpyrifos≥endosulfan sulfate>chlorfenvinphos≥lindane>alachlor≥atrazine. The sorption was greater for the most hydrophobic compounds and lower for the most polar ones, as corroborated by a negative correlation between Kf values and solubility. Sorption increased with an increase in organic matter. Sorption capacity was positively correlated with the organic carbon (OC) content. The organic amendment showing the maximum sorption capacity was RO3 in all cases, except for chlorfenvinphos, in which it was RO2. The order of adsorption capacity of the amendments depended on the pesticide and the organic dosage. In the case of the 10% amendment the order was RO3>RO2>RO1>soil, except for chlorfenvinphos, in which it was RO2>RO3>RO1>soil, and atrazine, where RO2 and RO3 amendments had the same effect on the soil sorption capacity (RO2≥RO3>RO1>soil).

  20. Short-term thermophilic treatment cannot remove tetracycline resistance genes in pig manures but exhibits controlling effects on their accumulation and spread in soil.

    PubMed

    Kang, Yijun; Li, Qing; Xia, Dan; Shen, Min; Mei, Lijuan; Hu, Jian

    2017-10-15

    In this work, a microcosm experiment was conducted to merely mimic thermophilic phase in aerobic composting with pig manures in order to explore: (i) the effect of thermophilic phase in composting on the abundances of tetracycline resistance genes (TRGs); and (ii) the impacts of the treated manures on the abundances of TRGs in soil. It was found that 4days of thermophilic process reduced the abundance of TRGs in pig manures by ∼1 lg unit compared to the samples without treatments, suggesting that other phases in composting may play significant roles in removal of TRGs. Once pig manures with thermophilic treatment were applied to soil, TRGs abundances decreased to the levels in unfertilized soil. With correlation analyses, it was concluded that pig manure derived tetracycline-resistant bacteria (TRB) and nutrients exerted different effects on TRGs abundances in soil. In conclusion, short-term thermophilic treatment cannot remove tetracycline resistance genes in pig manures but exhibits controlling effects on their accumulation and spread in soil. Nutrients enrichment in soil following manuring of treated pig manures, together with a large proportion of gram-positive TRB left in treated pig manures with less risk to TRGs spread, contributed to the controlling effects. Copyright © 2017 Elsevier B.V. All rights reserved.

  1. Model of fecal coliform overland transport from agricultural lands fertilized with animal manure

    USDA-ARS?s Scientific Manuscript database

    Risk assessment of surface water contamination after manure applications requires developing microbial transport models. Application of such models often leads to incorrect conclusions due to lack of calibration with experimental data and ignorance of spatial variability in bacterial concentrations....

  2. Excessive application of pig manure increases the risk of P loss in calcic cinnamon soil in China.

    PubMed

    Yang, Yanju; Zhang, Haipeng; Qian, Xiaoqing; Duan, Jiannan; Wang, Gailan

    2017-12-31

    Soil phosphorus (P) is a critical factor affecting crop yields and water environmental quality. To investigate the degree of loss risk and forms of soil P in calcic cinnamon soil, the P fraction activities in soils were analysed using chemical methods, combined with an in situ field experiment. Seven treatments were set in this study, including control (unfertilized), no P fertilizer (No-P), mineral P fertilizer (Min-P), low (L-Man) and high (H-Man) quantities of pig manure, Min-P+L-Man, and Min-P+H-Man. The results showed that manure fertilizer could not only significantly increase maize yield but could also enhance the accumulation of soil P in organic and inorganic forms. After 23years of repeated fertilization, the soil Olsen-P contents respectively showed 64.7-, 43.7- and 31.9-fold increases in the Min-P+H-Man, Min-P+L-Man and H-Man treatments, while the soil Olsen-P in Min-P treatment only increased 23.7-fold. The soil Olsen-P thresholds ranged from 22.59 to 32.48mgkg(-1) in calcic cinnamon soil to maintain a higher maize yield as well as a lower risk of P loss. Therefore, long-term excessive manure application could obviously raise the content of soil Olsen-P and increase the risk of P loss in calcic cinnamon soil. Copyright © 2017 Elsevier B.V. All rights reserved.

  3. Root Induced Heterogeneity In Agricultural Soils

    NASA Astrophysics Data System (ADS)

    Gomes, C.; Gabai, R.; Weisbrod, N.; Furman, A.

    2012-12-01

    In this study we investigate the role of plant induced heterogeneity on water dynamics in agricultural soils. We conducted three experiments in two sites (one still ongoing) in which a trench was excavated in the root zone of an orchard and the subsurface, to a depth of over 1 m, was instrumented in high resolution with water content, water potential and temperature sensors. High temporal resolution monitoring of soil state was carried for over a year, period that included natural (Mediterranean) climate boundary forcing. In addition, sprinkler, flood, and spray irrigation boundary conditions were forced for short time periods to explore the infiltration process under these conditions. One site was an Avocado orchard planted in red sandy soil while the other, still on-going, is in a grape vineyards irrigated by tap and treated wastewater, planted over alluvial clayey soil. In the vineyard, we are comparing soil irrigated with fresh water to soil irrigated with treated waste water for more than 10 years. Our preliminary results indicate several interesting phenomena. First, the role of plant roots is clearly seen as the major roots act as a conduit for water (and solute), providing a fast bypass of the upper soil. Further, we identified different regions of the subsurface that apparently were of the same texture, but in practice presented very different hydraulic properties. Second, the role of these roots depends on the boundary conditions. That is, the root bypass acts differently when soil is flooded than when flow is strictly unsaturated. As expected, simulation of the experimental results show good fit only if the domain heterogeneity of soil properties was incorporated. Results for the clayey soils were not available at time of abstract submission.

  4. [Effects of long-term manure and crop residues incorporation on yield and phosphorus saturation in a paddy soil].

    PubMed

    Yan, Xiao; Wang, De-Jian; Zhang, Gang; Ran, Jing; Zheng, Ji-Cheng

    2013-08-01

    An 8-year field experiment was conducted in the Taihu Lake region of eastern China to investigate the effects of incorporation of straw and manure on the yield and phosphorus (P) accumulation in the paddy soil, and to evaluate the potential risk of P loss from soil to environment. The experiment had four fertilization treatments, i. e., chemical fertilizers alone (NPK), chemical fertilizers plus rice/wheat straw (NPK + S), chemical fertilizers plus 7.5 t x (hm2 x a)(-1) wet pig manure (NPK + M7.5), and chemical fertilizers plus 15.0 t x (hm2 x a)(-1) wet pig manure (NPK + M15). Among the four treatments, no significant differences were observed in the yield of rice or wheat. Long-term application of chemical fertilizers plus pig manure significantly increased the soil total P, the degree of P saturation (DPS), and the concentration of extractable P forms, including Olsen-P, Mehlich 3 extractable P, CaCl2 extractable P, and water extractable P, which became a potential source of eutrophication in Taihu Lake. In contrast to chemical fertilizers plus pig manure, there were no significant differences in the concentrations of extractable P forms between the NPK + S and NPK treatments. We concludes that chemical fertilizers [P 45 kg x (hm2 x a)(-1)] plus rice/wheat straw should be recommended in the paddy soil in the Taihu Lake region under the rice-wheat rotation system.

  5. Marble waste and pig manure amendments decrease metal availability, increase soil quality and facilitate vegetation development in bare mine soils

    NASA Astrophysics Data System (ADS)

    Zornoza, Raúl; Faz, Ángel; Martínez-Martínez, Silvia; Acosta, José A.; Gómez, M. Dolores; Ángeles Muñoz, M.

    2013-04-01

    In order to bring out a functional and sustainable land use in a highly contaminated mine tailing, firstly environmental risks have to be reduced or eliminated by suitable reclamation activities. Tailing ponds pose environmental hazards, such as acidity and toxic metals reaching to waters through wind and water erosions and leaching. As a consequence, soils have no vegetation and low soil organic matter and nutrients. Various physicochemical and biochemical properties, together with exchangeable metals were measured before, 6 months and 12 months after the application of marble waste and pigs manure as reclamation strategy in a tailing pond from SE Spain to reduce hazards for environment and human health. Three months after the last addition of amendments, eight different native shrub species where planted for phytostabilization. Results showed the pH increased up to neutrality. Aggregates stability, organic carbon, total nitrogen, cation exchange capacity, bioavailable phosphorus and potassium, microbial biomass and microbial activity increased with the application of the amendments, while exchangeable metals drastically decreased (~90%). After one year of plantation, only 20% planted species died, with a high growth of survivals reaching flowering and fructification. This study confirms the high effectiveness of initial applications of marble wastes together with pig manure and plantation of shrub species to initialize the recovery of the ecosystem in bare mine soils under Mediterranean semiarid conditions. Key Words: pig manure, marble waste, heavy metals, mine soil. Acknowledgements This work has been funded by the European Union LIFE+ project MIPOLARE (LIFE09 ENV/ES/000439). J.A. Acosta acknowledges a "Saavedra Fajardo" contract from Comunidad Autónoma de Murcia (Spain)

  6. Effect of compost and manure amendments on zinc soil speciation, plant content, and translocation in an artificially contaminated soil.

    PubMed

    Al Chami, Ziad; Cavoski, Ivana; Mondelli, Donato; Miano, Teodoro

    2013-07-01

    The addition of organic matter in soil can modify the bioavailability of heavy metals. A greenhouse pot experiment was carried out using an edible plant species Eruca vesicaria L. Cavalieri grown on an artificially contaminated soil with Zn (665 mg kg(-1)). In this study, the effect of compost at 20 t ha(-1) (C20) and at 60 t ha(-1) (C60), manure at 10 t ha(-1) (M10) and at 30 t ha(-1) (M30), and chemical fertilizers (NPK) on Zn fate in a soil-plant system was evaluated. At the end of the experiment, the main growth parameters and Zn content in plants were determined. In addition, Zn speciation in the soil was assessed using the original Community Bureau of Reference sequential extraction and diethylene triamine pentaacetic acid extraction. Zinc, though an essential element for plant growth, caused toxicity effects in plants grown on control and manure treatments, while in the compost treatments, plants showed no visual toxicity symptoms. The concentrations of Zn in roots were similar for all treatments, while significant differences were observed for shoots. In fact, in the compost treatments, plants showed the lowest Zn concentration in shoots. Zinc speciation seems not to be affected by the applied treatments. Indeed, Zn plant content and translocation to shoots seems to be affected. Compost amendments significantly reduced Zn content and translocation in comparison to other treatments.

  7. Distribution of sulfamethazine, chlortetracycline and tylosin in manure and soil of Canadian feedlots after subtherapeutic use in cattle.

    PubMed

    Aust, Marc-Oliver; Godlinski, Frauke; Travis, Greg R; Hao, Xiying; McAllister, Tim A; Leinweber, Peter; Thiele-Bruhn, Sören

    2008-12-01

    Feedlots are potential point sources for the flow of antibiotics into the environment due to common use of antibiotics such as sulfamethazine, chlortetracycline and tylosin. Hence soils and manures originating from a grassland control, an experimental and a commercial feedlot were analyzed and mass balances were calculated for these antibiotics. Up to 9990 microg kg(-1) sulfamethazine and 401microg kg(-1) chlortetracycline on a dry matter basis were determined in feedlot manure. Soil concentrations were two orders of magnitude smaller. This corresponds to 7-40% of the calculated residual amount. In the commercial feedlot chlortetracycline was found down to soil depths of -40 cm; sulfamethazine was still detectable 1 year after medication. Sulfamethazine and chlortetracycline were additionally determined in manure of a control treatment in the experimental feedlot where cattle never received antibiotics. This was attributed to runoff from upslope pens. Consequently, antibiotics partially persist within feedlots and may be dislocated into the surrounding environment by vertical transport and runoff.

  8. Liquid Swine Manure Can Kill Verticillium dahliae Microsclerotia in Soil by Volatile Fatty Acid, Nitrous Acid, and Ammonia Toxicity.

    PubMed

    Conn, Kenneth L; Tenuta, Mario; Lazarovits, George

    2005-01-01

    ABSTRACT In previous studies, liquid swine manure (LSM) was sometimes shown to reduce Verticillium wilt of potato caused by Verticillium dahliae. We also observed that microsclerotia of this fungus died within 1 day, or between 3 and 6 weeks, after addition of LSM to some acid soils and within 1 week in some alkaline soils. In this study, we demonstrated that a volatile fatty acid (VFA) mixture with an identical concentration of VFAs as that found in an effective LSM reduced germination in an acid soil (pH 5.1) to the same extent as the LSM after 1 day of exposure. Germination was reduced by 45, 75, and 90% in the 10, 20, and 40% ([wt/wt] soil moisture) treatments, respectively, with the latter being equivalent to an application of 80 hl/ha. Addition to this acid soil of 19 LSMs (30% [wt/wt] soil moisture) collected from different producers resulted in complete kill of microsclerotia with 12 manures. Effective manures had a total concentration of nonionized forms of VFAs in soil solution of 2.7 mM or higher. In some acid soils (pH 5.8), addition of LSM (40% [wt/wt] soil moisture) did not kill microsclerotia until 3 to 6 weeks later. Here, a reduction in viability of microsclerotia was attributed to the accumulation of 0.06 mM nitrous acid in the soil solution at 4 weeks. When an LSM was added (40% [wt/wt] soil moisture) to an alkaline soil (pH 7.9) where VFAs are not toxic, microsclerotia germination was reduced by 80% after 1 week. Here the pH increased to 8.9 and the concentration of ammonia reached 30 mM in the soil solution. An ammonium chloride solution having an equivalent concentration of ammonium as the manure was shown to have the same spectrum of toxicity as the manure in assays ranging from pH 7 to 9, both in solutions and above the solutions. At pH 9, the concentration of ammonia reached 18 mM and 100% mortality of microsclerotia occurred. Thus, in acid soils, LSM can kill microsclerotia of V. dahliae by VFA and/or nitrous acid toxicity and in alkaline

  9. Appearance of β-lactam Resistance Genes in Agricultural Soils and Clinical Isolates over the 20th Century

    NASA Astrophysics Data System (ADS)

    Graham, David W.; Knapp, Charles W.; Christensen, Bent T.; McCluskey, Seánín; Dolfing, Jan

    2016-02-01

    Debate exists about whether agricultural versus medical antibiotic use drives increasing antibiotic resistance (AR) across nature. Both sectors have been inconsistent at antibiotic stewardship, but it is unclear which sector has most influenced acquired AR on broad scales. Using qPCR and soils archived since 1923 at Askov Experimental Station in Denmark, we quantified four broad-spectrum β-lactam AR genes (ARG; blaTEM, blaSHV, blaOXA and blaCTX-M) and class-1 integron genes (int1) in soils from manured (M) versus inorganic fertilised (IF) fields. “Total” β-lactam ARG levels were significantly higher in M versus IF in soils post-1940 (paired-t test; p < 0.001). However, dominant individual ARGs varied over time; blaTEM and blaSHV between 1963 and 1974, blaOXA slightly later, and blaCTX-M since 1988. These dates roughly parallel first reporting of these genes in clinical isolates, suggesting ARGs in animal manure and humans are historically interconnected. Archive data further show when non-therapeutic antibiotic use was banned in Denmark, blaCTX-M levels declined in M soils, suggesting accumulated soil ARGs can be reduced by prudent antibiotic stewardship. Conversely, int1 levels have continued to increase in M soils since 1990, implying direct manure application to soils should be scrutinized as part of future stewardship programs.

  10. Appearance of β-lactam Resistance Genes in Agricultural Soils and Clinical Isolates over the 20th Century

    PubMed Central

    Graham, David W.; Knapp, Charles W.; Christensen, Bent T.; McCluskey, Seánín; Dolfing, Jan

    2016-01-01

    Debate exists about whether agricultural versus medical antibiotic use drives increasing antibiotic resistance (AR) across nature. Both sectors have been inconsistent at antibiotic stewardship, but it is unclear which sector has most influenced acquired AR on broad scales. Using qPCR and soils archived since 1923 at Askov Experimental Station in Denmark, we quantified four broad-spectrum β-lactam AR genes (ARG; blaTEM, blaSHV, blaOXA and blaCTX-M) and class-1 integron genes (int1) in soils from manured (M) versus inorganic fertilised (IF) fields. “Total” β-lactam ARG levels were significantly higher in M versus IF in soils post-1940 (paired-t test; p < 0.001). However, dominant individual ARGs varied over time; blaTEM and blaSHV between 1963 and 1974, blaOXA slightly later, and blaCTX-M since 1988. These dates roughly parallel first reporting of these genes in clinical isolates, suggesting ARGs in animal manure and humans are historically interconnected. Archive data further show when non-therapeutic antibiotic use was banned in Denmark, blaCTX-M levels declined in M soils, suggesting accumulated soil ARGs can be reduced by prudent antibiotic stewardship. Conversely, int1 levels have continued to increase in M soils since 1990, implying direct manure application to soils should be scrutinized as part of future stewardship programs. PMID:26878889

  11. Simultaneous immobilization of lead and atrazine in contaminated soils using dairy-manure biochar.

    PubMed

    Cao, Xinde; Ma, Lena; Liang, Yuan; Gao, Bin; Harris, Willie

    2011-06-01

    Biochar produced from waste biomass is increasingly being recognized as a green, cost-effective amendment for environmental remediation. This work was to determine the ability of biochar to immobilize heavy metal Pb and organic pesticide atrazine in contaminated soils. Biochar prepared from dairy manure was incubated with contaminated soils at rates of 0, 2.5, and 5.0% by weight for 210 d. A commercial activated carbon (AC) was included as a comparison. The AC was effective in immobilizing atrazine, but was ineffective for Pb. However, biochar was effective in immobilizing both atrazine and Pb and the effectiveness was enhanced with increasing incubation time and biochar rates. After 210 d, soils treated with the highest rate of 5.0% biochar showed more than 57% and 66% reduction in Pb and atrazine concentrations in 0.01 M CaCl(2) extraction, respectively. Lead and atrazine concentrations in the toxicity characteristic leaching procedure solutions were reduced by 70-89% and 53-77%, respectively. Uptake of Pb and atrazine by earthworms (Eisenia fetida) was reduced by up to 79% and 73%. Phosphorus originally contained in biochar reacted with soil Pb to form insoluble hydroxypyromorphite Pb(5)(PO(4))(3)(OH), as determined by X-ray diffraction, which was presumably responsible for soil Pb immobilization, whereas atrazine stabilization may result from its adsorption by biochar demonstrated by the significant exponential decrease of extractable atrazine with increasing organic C in biochar (r(2) > 0.97, p < 0.05). The results highlighted the potential of dairy-manure biochar as a unique amendment for immobilization of both heavy metal and organic contaminants in cocontaminated soils.

  12. Low occurrence of Pseudomonas aeruginosa in agricultural soils with and without organic amendment

    PubMed Central

    Deredjian, Amélie; Colinon, Céline; Hien, Edmond; Brothier, Elisabeth; Youenou, Benjamin; Cournoyer, Benoit; Dequiedt, Samuel; Hartmann, Alain; Jolivet, Claudy; Houot, Sabine; Ranjard, Lionel; Saby, Nicolas P. A.; Nazaret, Sylvie

    2014-01-01

    The occurrence of Pseudomonas aeruginosa was monitored at a broad spatial scale in French agricultural soils, from various soil types and under various land uses to evaluate the ability of soil to be a natural habitat for that species. To appreciate the impact of agricultural practices on the potential dispersion of P. aeruginosa, we further investigated the impact of organic amendment at experimental sites in France and Burkina Faso. A real-time quantitative PCR (qPCR) approach was used to analyze a set of 380 samples selected within the French RMQS (“Réseau de Mesures de la Qualité des Sols”) soil library. In parallel, a culture-dependent approach was tested on a subset of samples. The results showed that P. aeruginosa was very rarely detected suggesting a sporadic presence of this bacterium in soils from France and Burkina Faso, whatever the structural and physico-chemical characteristics or climate. When we analyzed the impact of organic amendment on the prevalence of P. aeruginosa, we found that even if it was detectable in various manures (at levels from 103 to 105 CFU or DNA targets (g drywt)−1 of sample), it was hardly ever detected in the corresponding soils, which raises questions about its survival. The only case reports were from a vineyard soil amended with a compost of mushroom manure in Burgundy, and a few samples from two fields amended with raw urban wastes in the sub-urban area of Ouagadougou, Burkina Faso. In these soils the levels of culturable cells were below 10 CFU (g drywt)−1. PMID:24809025

  13. Decay of Bacterial Pathogens, Fecal Indicators, and Real-Time Quantitative PCR Genetic Markers in Manure-Amended Soils ▿ †

    PubMed Central

    Rogers, Shane W.; Donnelly, Matthew; Peed, Lindsay; Kelty, Catherine A.; Mondal, Sumona; Zhong, Zirong; Shanks, Orin C.

    2011-01-01

    This study examined persistence and decay of bacterial pathogens, fecal indicator bacteria (FIB), and emerging real-time quantitative PCR (qPCR) genetic markers for rapid detection of fecal pollution in manure-amended agricultural soils. Known concentrations of transformed green fluorescent protein-expressing Escherichia coli O157:H7/pZs and red fluorescent protein-expressing Salmonella enterica serovar Typhimurium/pDs were added to laboratory-scale manure-amended soil microcosms with moisture contents of 60% or 80% field capacity and incubated at temperatures of −20°C, 10°C, or 25°C for 120 days. A two-stage first-order decay model was used to determine stage 1 and stage 2 first-order decay rate coefficients and transition times for each organism and qPCR genetic marker in each treatment. Genetic markers for FIB (Enterococcus spp., E. coli, and Bacteroidales) exhibited decay rate coefficients similar to that of E. coli O157:H7/pZs but not of S. enterica serovar Typhimurium/pDs and persisted at detectable levels longer than both pathogens. Concentrations of these two bacterial pathogens, their counterpart qPCR genetic markers (stx1 and ttrRSBCA, respectively), and FIB genetic markers were also correlated (r = 0.528 to 0.745). This suggests that these qPCR genetic markers may be reliable conservative surrogates for monitoring fecal pollution from manure-amended land. Host-associated qPCR genetic markers for microbial source tracking decayed rapidly to nondetectable concentrations, long before FIB, Salmonella enterica serovar Typhimurium/pDs, and E. coli O157:H7/pZs. Although good indicators of point source or recent nonpoint source fecal contamination events, these host-associated qPCR genetic markers may not be reliable indicators of nonpoint source fecal contamination events that occur weeks following manure application on land. PMID:21642395

  14. [Effects of rotations and different green manure utilizations on crop yield and soil fertility].

    PubMed

    Yao, Zhi-yuan; Wang, Zheng; Li, Jing; Yu, Chang-wei; Cao, Qun-hu; Cao, Wei-dong; Gao, Ya-jun

    2015-08-01

    A 4-year field experiment was conducted to investigate the influence of three rotation systems and three corresponding leguminous green manure (LGM) application methods on wheat yield and soil properties. The rotation patterns were summer fallow--winter wheat (SW), LGM-- winter wheat (LW) and LGM--spring maize--winter wheat (LMW). The three LGM application methods of LW included: early mulch, early incorporation and late incorporation while the three LGM application methods of LMW were: stalk mulch, stalk incorporation and stalk move-away. The results indicated that for LW, LGM consumed more soil water, thus the wheat yield was not stable. The nitrate storage in 0-200 cm soil after wheat harvest was significantly higher than that of the others, indicating an increasing risk of nitrate leaching. Early mulch under LW had the highest soil organic carbon (SOC) content and storage of SOC (SSOC) in 0-20 cm soil. For LMW, wheat yield was comparatively stable among years, because of higher water storage before wheat seeding, and the nitrate storage in 0-200 cm soil after wheat harvest was significantly lower than LW, which decreased the risk of nitrate leaching. Stalk mulch had higher SOC content in 0-20 cm soil after wheat harvest compared with move-away. In addition, compared with the soil when the experiment started, stalk much also increased SSOC in 0-20 cm soil. In conclusion, LMW with stalk mulch could increase soil water storage, stabilize crop yield, improve soil fertility and decrease 0-200 cm soil nitrate storage. This system could be treated as a good alternative for areas with similar climate.

  15. Greenhouse gas emissions and soil properties following amendment with manure-derived biochars: Influence of pyrolysis temperature and feedstock type.

    PubMed

    Subedi, Raghunath; Taupe, Natalie; Pelissetti, Simone; Petruzzelli, Laura; Bertora, Chiara; Leahy, James J; Grignani, Carlo

    2016-01-15

    Manure-derived biochars can offer a potential option for the stabilization of manure, while mitigating climate change through carbon sequestration and the attenuation of nitrous oxide emission. A laboratory incubation study was conducted to assess the effects of four different manure-derived biochars produced from different feedstocks (poultry litter and swine manure) at different temperatures (400 or 600 °C). A commonly available standard wood chip biochar, produced at a greater temperature (1000 °C), and non-amended treatments were used as references. Two different soils (sandy and silt-loam) were amended with 2% (w/w) biochar on a dry soil weight basis (corresponding to 20 Mg ha(-1)), with the soil moisture being adjusted to 75% saturation level. After a pre-incubation period (21 days), 170 kg N ha(-1) of NH4NO3 fertilizer was added. Measurements of CO2, N2O, CH4 emissions and soil N mineralisation were carried out on different days during the 85 days of incubation. The net C mineralization and N2O emissions from both soils amended with poultry litter biochar at 400 °C were significantly greater than the other biochar treatments. Nitrate availability was greater in both soils in which the manure-derived biochar was used instead of the standard biochar. All of the biochars increased the pH of the silt-loam, sub-acid soil, but failed to improve the cation exchange capacities (CEC) in either soil. Total C and N, P, K and Mg (except Ca) were significantly increased in the manure-derived biochar amended soils, compared to the Control, and were positively correlated to the biochar nutrient contents. This study indicates that the soil application of biochar engenders effects that can vary considerably according to the biochar properties, as determined on the basis of the feedstock types and process conditions. Low-temperature biochar production from manure represents a possible way of producing a soil amendment that can stabilize C while supplying a

  16. Agriculture on Mars: Soils for Plant Growth

    NASA Technical Reports Server (NTRS)

    Ming, D. W.

    2016-01-01

    Robotic rovers and landers have enabled the mineralogical, chemical, and physical characterization of loose, unconsolidated materials on the surface of Mars. Planetary scientists refer to the regolith material as "soil." NASA is currently planning to send humans to Mars in the mid 2030s. Early missions may rely on the use of onsite resources to enable exploration and self-sufficient outposts on Mars. The martian "soil" and surface environment contain all essential plant growth elements. The study of martian surface materials and how they might react as agricultural soils opens a new frontier for researchers in the soil science community. Other potential applications for surface "soils" include (i) sources for extraction of essential plant-growth nutrients, (ii) sources of O2, H2, CO2, and H2O, (iii) substrates for microbial populations in the degradation of wastes, and (iv) shielding materials surrounding outpost structures to protect humans, plants, and microorganisms from radiation. There are many challenges that will have to be addressed by soil scientists prior to human exploration over the next two decades.

  17. Nitrous oxide emission from wetland soil following single and seasonal split application of cattle manure to field tomato (Lycopersicon esculentum, Mill var. Heinz) and rape (Brassica napus, L. var. Giant) crops.

    PubMed

    Masaka, Johnson; Nyamangara, Justice; Wuta, Menas

    2016-01-01

    An understanding of the contribution of manure applications to global atmospheric N2O loading is needed to evaluate agriculture's contribution to the global warming process. Two field experiments were carried out at Dufuya wetland (19°17'S; 29°21'E, 1260 m above sea level) to determine the effects of single and split manure applications on emissions of N2O from soil during the growing seasons of two rape and two tomato crops. Two field experiments were established. In the first experiment the manure was applied in three levels of 0, 15, and 30 Mg ha(-1) as a single application just before planting of the first tomato crop. In the second experiment the 15 and 30 Mg ha(-1) manure application rates were divided into four split applications of 3.75 and 7.5 Mg ha(-1) respectively, for each of the four cropping events. Single applications of 15 and 30 Mg ha(-1) manure once in four cropping events had higher emissions of N2O than those recorded on plots that received split applications of 3.75 and 7.5 Mg ha(-1) manure at least up to the second test crop. Thereafter N2O emissions on plots subjected to split applications of manure were higher or equal to those recorded in plots that received single basal applications of 30 Mg ha(-1) applied a week before planting the first crop. Seasonal split applications of manure to wetland vegetable crops can reduce emissions of N2O at least up to the second seasonal split application.

  18. Effects of liquid swine manure on sorption of 17ß-estradiol to soil

    USDA-ARS?s Scientific Manuscript database

    Estrogens are potent endocrine disrupting chemicals and can be found in the environment. Animal manure can contain estrogenic hormones, specifically 17'-estradiol (E2). A common manure management practice is to contain liquid manure in a manure storage ponds or lagoons, which is then applied on or i...

  19. Effect of mineral and manure phosphorus sources on runoff phosphorus.

    PubMed

    Kleinman, Peter J A; Sharpley, Andrew N; Moyer, Barton G; Elwinger, Gerald F

    2002-01-01

    Concern over nonpoint-source phosphorus (P) losses from agricultural lands to surface waters has resulted in scrutiny of factors affecting P loss potential. A rainfall simulation study was conducted to quantify the effects of alternative P sources (dairy manure, poultry manure, swine slurry, and diammonium phosphate), application methods, and initial soil P concentrations on runoff P losses from three acidic soils (Buchanan-Hartleton, Hagerstown, and Lewbeach). Low P (12 to 26 mg kg(-1) Mehlich-3 P) and high P (396 to 415 mg kg(-1) Mehlich-3 P) members of each soil were amended with 100 kg total P ha(-1) from each of the four P sources either by surface application or mixing, and subjected to simulated rainfall (70 mm h(-1) to produce 30 min runoff). Phosphorus losses from fertilizer and manure applied to the soil surface differed significantly by source, with dissolved reactive phosphorus (DRP) accounting for 64% of total phosphorus (TP) (versus 9% for the unamended soils). For manure amended soils, these losses were linearly related to water-soluble P concentration of manure (r2 = 0.86 for DRP, r2 = 0.78 for TP). Mixing the P sources into the soil significantly decreased P losses relative to surface P application, such that DRP losses from amended, mixed soils were not significantly different from the unamended soil. Results of this study can be applied to site assessment indices to quantify the potential for P loss from recently manured soils.

  20. Evolution of farm and manure management and their influence on ammonia emissions from agriculture in Switzerland between 1990 and 2010

    NASA Astrophysics Data System (ADS)

    Kupper, Thomas; Bonjour, Cyrill; Menzi, Harald

    2015-02-01

    The evolution of farm and manure management and their influence on ammonia (NH3) emissions from agriculture in Switzerland between 1990 and 2010 was modeled. In 2010, total agricultural NH3 emissions were 48,290 t N. Livestock contributed 90% (43,480 t N), with the remaining 10% (4760 t N) coming from arable and fodder crops. The emission stages of grazing, housing/exercise yard, manure storage and application produced 3%, 34%, 17% and 46%, respectively, of livestock emissions. Cattle, pigs, poultry, small ruminants, horses and other equids accounted for 78%, 15%, 3%, 2% and 2%, respectively, of the emissions from livestock and manure management. Compared to 1990, total NH3 emissions from agriculture and from livestock decreased by 16% and 14%, respectively. This was mainly due to declining livestock numbers, since the emissions per animal became bigger for most livestock categories between 1990 and 2010. The production volume for milk and meat remained constant or increased slightly. Other factors contributing to the emission mitigation were increased grazing for cattle, the growing importance of low-emission slurry application techniques and a significant reduction in the use of mineral fertilizer. However, production parameters enhancing emissions such as animal-friendly housing systems providing more surface area per animal and total volume of slurry stores increased during this time period. That such developments may counteract emission mitigation illustrates the challenge for regulators to balance the various aims in the striving toward sustainable livestock production. A sensitivity analysis identified parameters related to the excretion of total ammoniacal nitrogen from dairy cows and slurry application as being the most sensitive technical parameters influencing emissions. Further improvements to emission models should therefore focus on these parameters.

  1. Transport of Manure Constituents in Runoff

    NASA Astrophysics Data System (ADS)

    Shelton, D.; Guber, A.; Sadeghi, A. M.; Sikora, L. M.; Nemes, A.; Pachepsky, Y. A.

    2005-12-01

    Fecal coliforms (FC) are often used as indicators of pathogenic bacteria contamination of surface water from surface-applied manure. Manure constituents other than FC may serve as natural tracers of bacterial contamination provided the rates of release from manure and surface transport mechanisms are similar. The objective of this work was to compare fecal coliforms (FC), organic carbon (OC), and water-soluble phosphorus (P) transport from dissolving manure applied on hillslopes with different soil texture and surface cover conditions under simulated rainfall. Two-by-six meters runoff plots were set in triplicate on vegetated and bare 20% slopes with sandy loam and clay loam soils at the ARS Beltsville Agricultural Research Center. Fresh bovine manure was applied at the top 30-cm wide strip, and at 50 cm x 30 cm miniplots in the immediate vicinity of runoff plots. Rainfall (ca. 6 cm per hour) was simulated for 1 hour on bare plots and for 1.5 hours on vegetated plots. Runoff was collected from gutters at the edge of runoff plots and miniplots at five-min intervals. In general, the volume of runoff was less from vegetated plots than from bare plots, and was less from sandy loam plots than from clay loam plots. Partitioning of fecal coliforms between runoff and suspended sediment was quantified using the partitioning coefficient Kd. The Kd values were greater for the sandy loam plot than the clay loam soil. The value of the partitioning coefficient increased from spring to fall at all plots. Release kinetics of FC and soluble P were similar. The fast release stage of about 20 minutes was followed by aa relatively slow release stage. Both soil texture and vegetation significantly affected transport of the manure constituents. More than 70% of manure FC and OC were transported with runoff over bare plots, and less than 15% over vegetation plots. Overall, manure-borne P appears to be a promising potential tracer for assessing of manure-borne bacteria transport.

  2. How Does Recycling of Livestock Manure in Agroecosystems Affect Crop Productivity, Reactive Nitrogen Losses, and Soil Carbon Balance?

    PubMed

    Xia, Longlong; Lam, Shu Kee; Yan, Xiaoyuan; Chen, Deli

    2017-07-05

    Recycling of livestock manure in agroecosystems to partially substitute synthetic fertilizer nitrogen (N) input is recommended to alleviate the environmental degradation associated with synthetic N fertilization, which may also affect food security and soil greenhouse gas (GHG) emissions. However, how substituting livestock manure for synthetic N fertilizer affects crop productivity (crop yield; crop N uptake; N use efficiency), reactive N (Nr) losses (ammonia (NH3) emission, N leaching and runoff), GHG (methane, CH4; and nitrous oxide, N2O; carbon dioxide) emissions and soil organic carbon (SOC) sequestration in agroecosystems is not well understood. We conducted a global meta-analysis of 141 studies and found that substituting livestock manure for synthetic N fertilizer (with equivalent N rate) significantly increased crop yield by 4.4% and significantly decreased Nr losses via NH3 emission by 26.8%, N leaching by 28.9% and N runoff by 26.2%. Moreover, annual SOC sequestration was significantly increased by 699.6 and 401.4 kg C ha(-1) yr(-1) in upland and paddy fields, respectively; CH4 emission from paddy field was significantly increased by 41.2%, but no significant change of that was observed from upland field; N2O emission was not significantly affected by manure substitution in upland or paddy fields. In terms of net soil carbon balance, substituting manure for fertilizer increased carbon sink in upland field, but increased carbon source in paddy field. These results suggest that recycling of livestock manure in agroecosystems improves crop productivity, reduces Nr pollution and increases SOC storage. To attenuate the enhanced carbon source in paddy field, appropriate livestock manure management practices should be adopted.

  3. Approximating Phosphorus Leaching from Agricultural Organic Soils by Soil Testing.

    PubMed

    Zheng, Z M; Zhang, T Q; Kessel, C; Tan, C S; O'Halloran, I P; Wang, Y T; Speranzini, D; Van Eerd, L L

    2015-11-01

    Phosphorus applied to soils in excess of crop requirement could create situations favorable to P enrichment in subsurface flow that contributes to eutrophication of surface water. This pathway of P loss can be more severe in muck (i.e., organic) soils where agricultural production is intensive. This study evaluated the suitability of various environmental and agronomic soil P tests initially designed for mineral soils to predict dissolved reactive P (DRP) in subsurface flow from organic soils. Intact soil columns were collected from 44 muck soils in Ontario to provide a wide range of soil test P levels. A lysimeter leaching study was conducted by evenly adding water in an amount equivalent to 5 mm of rainfall. The leachate DRP concentration was linearly related to soil water-extractable P and CaCl-extractable P with values of 0.90 and 0.93, respectively, and to Bray-1 P and FeO-impregnated filter paper extractable P in a split-line model with a change point. Mehlich-3 P and Olsen P, a method recommended for agronomic P calibration in Ontario, were not related to leachate DRP concentration. All P sorption index (PSI) based degree of P saturation (DPS) values were closely related to leachate DRP in split-line models, with the DPS indices expressed as Bray-1 P/PSI and FeO-P/PSI having the highest correlation with leachate DRP concentration. Because it is desirable from practical and economic standpoints that the environmental risk assessment shares the same soil test with agronomic P calibration, the two PSI-based DPS indices as presented can be considered as environmental risk indicators of DRP subsurface loss from organic soils.

  4. Impacts of manure application on soil environment, rainfall use efficiency and crop biomass under dryland farming

    PubMed Central

    Wang, Xiaojuan; Jia, Zhikuan; Liang, Lianyou; Yang, Baoping; Ding, Ruixia; Nie, Junfeng; Wang, Junpeng

    2016-01-01

    Because of inadequate nutrient and water supply, soils are often unproductive in Northwest China. We studied the effects of manure application at low (LM 7.5  t ha–1), medium (MM 15 t ha–1), and high (HM 22.5 t ha–1) rates combined with fixed levels of chemical fertilizers on maize growth and rainfall use efficiency compared with chemical fertilizers (CK) under semi-arid conditions over a three-year period. HM and MM treatments could significantly increase soil water storage (0–120 cm) at tasseling stage of maize compared with LM treatment and CK (P < 0.05). Dry matter accumulation and rainfall use efficiency increased as manure application rate increasing (P < 0.05). HM treatment significantly increased rainfall use efficiency by 6.5–12.7% at big trumpeting – tasseling stage compared with LM and MM treatments. HM and MM treatments increased rainfall use efficiency by 8.6–18.1% at tasseling – grain filling stage compared with CK. There was no significant difference on biomass between HM and MM treatments at grain filling and maturity stages of maize in 2009 and 2010. PMID:26869520

  5. Propidium Monoazide Coupled with PCR Predicts Infectivity of Enteric Viruses in Swine Manure and Biofertilized Soil.

    PubMed

    Fongaro, Gislaine; Hernández, Marta; García-González, María Cruz; Barardi, Célia Regina Monte; Rodríguez-Lázaro, David

    2016-03-01

    The use of propidium monoazide (PMA) coupled with real-time PCR (RT-qPCR or qPCR for RNA or DNA viruses, respectively) was assessed to discriminate infectious enteric viruses in swine raw manure, swine effluent from anaerobic biodigester (AB) and biofertilized soils. Those samples were spiked either with infectious and heat-inactivated human adenovirus-2 (HAdV-2) or mengovirus (vMC0), and PMA-qPCR/RT-qPCR allowed discriminating inactivated viruses from the infective particles, with significant reductions (>99.9%). Then, the procedure was further assayed to evaluate the presence and stability of two non-cultivable viruses (porcine adenovirus and rotavirus A) in natural samples (swine raw manure, swine effluent from AB and biofertilized soils); it demonstrated viral inactivation during the storage period at 23 °C. As a result, the combination of PMA coupled to real-time PCR can be a promising alternative for prediction of viral infectivity in comparison to more labour-intensive and costly techniques such as animal or tissue-culture infectivity methods, and for those viruses that do not have currently available cell culture techniques.

  6. Remediation of degraded arable steppe soils in Moldova using vetch as green manure

    NASA Astrophysics Data System (ADS)

    Wiesmeier, M.; Lungu, M.; Hübner, R.; Cerbari, V.

    2015-05-01

    In the Republic of Moldova, non-sustainable arable farming led to severe degradation and erosion of fertile steppe soils (Chernozems). As a result, the Chernozems lost about 40% of their initial amounts of soil organic carbon (SOC). The aim of this study was to remediate degraded arable soils and promote carbon sequestration by implementation of cover cropping and green manuring in Moldova. Thereby, the suitability of the legume hairy vetch (Vicia sativa) as cover crop under the dry continental climate of Moldova was examined. At two experimental sites, the effect of cover cropping on chemical and physical soil properties as well as on yields of subsequent main crops was determined. The results showed a significant increase of SOC after incorporation of hairy vetch mainly due to increases of aggregate-occluded and mineral-associated OC. This was related to a high above- and belowground biomass production of hairy vetch associated with a high input of carbon and nitrogen into arable soils. A calculation of SOC stocks based on equivalent soil masses revealed a sequestration of around 3 t C ha-1yr-1 as a result of hairy vetch cover cropping. The buildup of SOC was associated with an improvement of the soil structure as indicated by a distinct decrease of bulk density and a relative increase of macroaggregates at the expense of microaggregates and clods. As a result, yields of subsequent main crops increased by around 20%. Our results indicated that hairy vetch is a promising cover crop to remediate degraded steppe soils, control soil erosion and sequester substantial amounts of atmospheric C in arable soils of Moldova.

  7. Soil macronutrient sensing for precision agriculture.

    PubMed

    Kim, Hak-Jin; Sudduth, Kenneth A; Hummel, John W

    2009-10-01

    Accurate measurements of soil macronutrients (i.e., nitrogen, phosphorus, and potassium) are needed for efficient agricultural production, including site-specific crop management (SSCM), where fertilizer nutrient application rates are adjusted spatially based on local requirements. Rapid, non-destructive quantification of soil properties, including nutrient levels, has been possible with optical diffuse reflectance sensing. Another approach, electrochemical sensing based on ion-selective electrodes or ion-selective field effect transistors, has been recognized as useful in real-time analysis because of its simplicity, portability, rapid response, and ability to directly measure the analyte with a wide range of sensitivity. Current sensor developments and related technologies that are applicable to the measurement of soil macronutrients for SSCM are comprehensively reviewed. Examples of optical and electrochemical sensors applied in soil analyses are given, while advantages and obstacles to their adoption are discussed. It is proposed that on-the-go vehicle-based sensing systems have potential for efficiently and rapidly characterizing variability of soil macronutrients within a field.

  8. Long-term fertilization of organic manure led to the succession of Bacillus community in an alluvial-aquic soil

    NASA Astrophysics Data System (ADS)

    Chen, Ruirui; Lin, Xiangui; Feng, Youzhi; Hu, Junli; Wang, Ruirui

    2014-05-01

    Long-term fertilization inevitably influences soil physic-chemical and biological properties. Our previous studies with a long-term fertilization experiment on an alluvial-aquic have revealed that specific Bacillus spp. was observed in organic manure-fertilized soils. The current study investigated the effects of long-term fertilization on the succession of Bacillus community in soils and their functions. The experiment included three fertilizer treatments: organic manure (OM), mineral fertilizers (NPK) and the control (without fertilizers). The results showed that long-term application of chemical fertilizers didn't increase the quantity of soil microbial population as much as organic fertilizers did, but it played an important role in maintaining the diversity and community structure of indigenous Bacilli. Correspondingly, long-term application of organic manure significantly increased the quantity while significantly decreased the diversity of Bacilli community. The ratio of Bacilli/bacteria was more constant in OM treatment than NPK indicating the stability of the response to long-term organic fertilizers. PCR-DGGE and clone library revealed the succession of Bacillus community after long-term application of organic manure and the dominant Bacillus spp occurred in the treatmen OM was Bacillus asahii. Our results also proved that Bacillus asahii was not derived from exogenous organic manure, but one of indigenous bacteria in the soil. Bacillus asahii was induced by the substrate after the application of organic manure, and gradually evolved into dominant Bacillus after 4 to 5 years. With an enzyme assay test of pure species and a soil incubation experiment, we came to a preliminary judgment, that the dominant Bacillus asahii didn't significantly influence the decomposition rate of cellulose and protein in the soil, but it promoted the decomposition of lipids, and could also improve the transformation process from fresh organic matter to humus. Applied organic

  9. Considerations for sampling contaminants in agricultural soils.

    PubMed

    Ramsey, Charles A

    2015-01-01

    Sampling agricultural soils for contaminants is relatively new. Existing standard sampling protocols used for the evaluation of soil nutrients are likely insufficient for contaminants. The main reasons are the very low analyte levels and differences in heterogeneity between nutrients and contaminants. To evaluate the adequacy of existing sampling protocols or to develop new protocols, a systematic scientific approach is needed. This approach begins with the development of the Sample Quality Criteria followed by a realistic understanding of the properties of the material to be sampled, most notably its heterogeneity. The Sample Quality Criteria and material properties are inputs into the Theory of Sampling. With these inputs, the Theory of Sampling can be used to determine the specifics of the sampling protocol (e.g., mass, number of increments, tool selection) that must be implemented to control error to reliably estimate the concentration of the analyte(s) of interest. Development of sampling protocols in this manner will ensure sample representativeness and therefore improve data equivalency among various parties involved. This is the only way to provide a sound technical basis for defensible decision making to ensure increased safety of food and feed, specifically with respect to contaminants in agricultural soils.

  10. Soil Organic Carbon dynamics in agricultural soils of Veneto Region

    NASA Astrophysics Data System (ADS)

    Bampa, F. B.; Morari, F. M.; Hiederer, R. H.; Toth, G. T.; Giandon, P. G.; Vinci, I. V.; Montanarella, L. M.; Nocita, M.

    2012-04-01

    One of the eight soil threats expressed in the European Commission's Thematic Strategy for Soil Protection (COM (2006)231 final) it's the decline in Soil Organic Matter (SOM). His preservation is recognized as with the objective to ensure that the soils of Europe remain healthy and capable of supporting human activities and ecosystems. One of the key goals of the strategy is to maintain and improve Soil Organic Carbon (SOC) levels. As climate change is identified as a common element in many of the soil threats, the European Commission (EC) intends to assess the actual contribution of the soil protection to climate change mitigation and the effects of climate change on the possible depletion of SOM. A substantial proportion of European land is occupied by agriculture, and consequently plays a crucial role in maintaining natural resources. Organic carbon preservation and sequestration in the EU's agricultural soils could have some potential to mitigate the effects of climate change, particularly linked to preventing certain land use changes and maintaining SOC stocks. The objective of this study is to assess the SOC dynamics in agricultural soils (cropland and grassland) at regional scale, focusing on changes due to land use. A sub-objective would be the evaluation of the most used land management practices and their effect on SOC content. This assessment aims to determine the geographical distribution of the potential GHG mitigation options, focusing on hot spots in the EU, where mitigation actions would be particularly efficient and is linked with the on-going work in the JRC SOIL Action. The pilot area is Veneto Region. The data available are coming from different sources, timing and involve different variables as: soil texture, climate, soil disturbance, managements and nutrients. The first source of data is the LUCAS project (Land Use/Land Cover Area Frame statistical Survey). Started in 2001, the LUCAS project aims to monitor changes in land cover/use and

  11. Impacts of agricultural management and climate change on future soil organic carbon dynamics in North China Plain.

    PubMed

    Wang, Guocheng; Li, Tingting; Zhang, Wen; Yu, Yongqiang

    2014-01-01

    Dynamics of cropland soil organic carbon (SOC) in response to different management practices and environmental conditions across North China Plain (NCP) were studied using a modeling approach. We identified the key variables driving SOC changes at a high spatial resolution (10 km × 10 km) and long time scale (90 years). The model used future climatic data from the FGOALS model based on four future greenhouse gas (GHG) concentration scenarios. Agricultural practices included different rates of nitrogen (N) fertilization, manure application, and stubble retention. We found that SOC change was significantly influenced by the management practices of stubble retention (linearly positive), manure application (linearly positive) and nitrogen fertilization (nonlinearly positive) - and the edaphic variable of initial SOC content (linearly negative). Temperature had weakly positive effects, while precipitation had negligible impacts on SOC dynamics under current irrigation management. The effects of increased N fertilization on SOC changes were most significant between the rates of 0 and 300 kg ha-1 yr-1. With a moderate rate of manure application (i.e., 2000 kg ha-1 yr-1), stubble retention (i.e., 50%), and an optimal rate of nitrogen fertilization (i.e., 300 kg ha-1 yr-1), more than 60% of the study area showed an increase in SOC, and the average SOC density across NCP was relatively steady during the study period. If the rates of manure application and stubble retention doubled (i.e., manure application rate of 4000 kg ha-1 yr-1 and stubble retention rate of 100%), soils across more than 90% of the study area would act as a net C sink, and the average SOC density kept increasing from 40 Mg ha-1 during 2010s to the current worldwide average of ∼ 55 Mg ha-1 during 2060s. The results can help target agricultural management practices for effectively mitigating climate change through soil C sequestration.

  12. Impacts of Agricultural Management and Climate Change on Future Soil Organic Carbon Dynamics in North China Plain

    PubMed Central

    Wang, Guocheng; Li, Tingting; Zhang, Wen; Yu, Yongqiang

    2014-01-01

    Dynamics of cropland soil organic carbon (SOC) in response to different management practices and environmental conditions across North China Plain (NCP) were studied using a modeling approach. We identified the key variables driving SOC changes at a high spatial resolution (10 km×10 km) and long time scale (90 years). The model used future climatic data from the FGOALS model based on four future greenhouse gas (GHG) concentration scenarios. Agricultural practices included different rates of nitrogen (N) fertilization, manure application, and stubble retention. We found that SOC change was significantly influenced by the management practices of stubble retention (linearly positive), manure application (linearly positive) and nitrogen fertilization (nonlinearly positive) – and the edaphic variable of initial SOC content (linearly negative). Temperature had weakly positive effects, while precipitation had negligible impacts on SOC dynamics under current irrigation management. The effects of increased N fertilization on SOC changes were most significant between the rates of 0 and 300 kg ha−1 yr−1. With a moderate rate of manure application (i.e., 2000 kg ha−1 yr−1), stubble retention (i.e., 50%), and an optimal rate of nitrogen fertilization (i.e., 300 kg ha−1 yr−1), more than 60% of the study area showed an increase in SOC, and the average SOC density across NCP was relatively steady during the study period. If the rates of manure application and stubble retention doubled (i.e., manure application rate of 4000 kg ha−1 yr−1 and stubble retention rate of 100%), soils across more than 90% of the study area would act as a net C sink, and the average SOC density kept increasing from 40 Mg ha−1 during 2010s to the current worldwide average of ∼55 Mg ha−1 during 2060s. The results can help target agricultural management practices for effectively mitigating climate change through soil C sequestration. PMID:24722689

  13. Cropping System and Type of Pig Manure Affect Nitrate-Nitrogen Leaching in a Sandy Loam Soil.

    PubMed

    Karimi, Rezvan; Akinremi, Wole; Flaten, Don

    2017-07-01

    The application of livestock manure can result in the loss of nitrate-nitrogen (NO-N) and degrade surface and groundwater. A 3-yr lysimeter study was set up to compare the effect of cropping system and nitrogen (N)- and phosphorus (P)-based pig manure application rates on the loss of water and NO-N below the root zone. The experiment was a split-plot design with annual and perennial cropping systems as the main factor. Five nutrient management treatments were the subplots: N-based liquid pig manure application; P-based liquid pig manure application, N-based solid pig manure application, P-based solid pig manure application, and a control without amendment. The results showed that 40 to 60 kg NO-N ha was lost from the annual plots in 2010 and 23 to 60 kg NO-N ha in 2011, whereas a negligible amount of NO-N was lost from the perennial (<1 kg ha) plots in both years. The application of solid pig manure on a P basis followed by urea in subsequent years reduced the risk of NO-N leaching over the course of the rotation, likely due to immobilization of N by the straw in the solid pig manure. Our study showed that a perennial cropping system consisting of a mixture of grasses has the capacity to receive and utilize significant amounts of nutrients with negligible amount of nutrient leakages to the adjacent environment. The inclusion of grasses in a crop rotation and their use to take up excess nutrients are sustainable practices that will benefit the environment. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  14. Characterization of antibiotic resistant (AR) fecal indicators in runoff from fields amended with swine manure

    USDA-ARS?s Scientific Manuscript database

    The application of animal manures to agricultural soil is a widespread practice. One concern associated with food animal manures is the introduction of antibiotic drugs, AR bacteria, and AR genes that may be spread through and across agroecosystems, with the potential to adversely impact the treatm...

  15. Retention of heavy metals in a Typic Kandiudult amended different manure-based biochars

    USDA-ARS?s Scientific Manuscript database

    Although nutrient-rich manure biochars are expected to be a cost-effective heavy metal stabilizer in both agricultural and contaminated soils, systematic studies are lacking to predict the influence of manure variety and pyrolysis temperature on metal binding potentials. In this study, biochars wer...

  16. Combining agricultural practices key to elevating soil microbial activities

    USDA-ARS?s Scientific Manuscript database

    The concept of soil health is an emerging topic in applied ecology, specifically as it pertains to the agriculture, which utilizes approximately 40% of earth’s land. However, rigorous quantification of soil health and the services provided by soil organisms to support agriculture production (e.g., n...

  17. Fate of potential indicator antimicrobial resistance genes (ARGs) and bacterial community diversity in simulated manure-soil microcosms.

    PubMed

    Wang, Mianzhi; Liu, Peng; Xiong, Wenguang; Zhou, Qin; Wangxiao, Junyi; Zeng, Zhenling; Sun, Yongxue

    2017-09-24

    The aim of this study was to investigate the fate of nine potential indicator antimicrobial resistance genes (ARGs) (sul1, sul2, tetB, tetM, ermB, ermF, fexA, cfr, intI1) and the diversity of bacterial communities in response to poultry manure applications to arable soil over a 90 day period. Quantitative real time PCR and Illumina high-throughput sequencing of 16S rDNA gene were used to quantify and trace ARG fate. The levels of all genes dramatically decreased over time and intI1, sul1, sul2 and tetM always had the greatest abundance and lowest dissipation rates. This indicated that more effort should be focused on the ARG elimination from manure rather than waiting for subsequent attenuation in the environment. Our sequencing results documented dramatic changes in the microbial community structure and diversity during these experiments. In poultry manure groups, Bacteroidetes and Actinobacteria were the two dominant phyla while Acidobacteria dominated the control groups. Moreover, the relative abundance of genera Corynebacterium, Pseudomonas, Ochrobactrum, Actinomadura and Bacillus, which contained potential opportunistic pathogens, changed over time suggesting that poultry manure not only strongly influenced bacterial community composition, but also selected specific bacterial communities. This study provides a glimpse of ARG fates and bacterial community diversity in soil after the application of poultry manure. Copyright © 2017 Elsevier Inc. All rights reserved.

  18. Percolation and Survival of Escherichia coli O157:H7 and Salmonella enterica Serovar Typhimurium in Soil Amended with Contaminated Dairy Manure or Slurry▿

    PubMed Central

    Semenov, Alexander V.; van Overbeek, Leo; van Bruggen, Ariena H. C.

    2009-01-01

    The effect of cattle manure and slurry application on percolation and survival of Escherichia coli O157:H7 and Salmonella enterica serovar Typhimurium was investigated for different soil depths after the addition of water. Four treatments were chosen for the first set of experiments: (i) addition of inoculated farmyard manure on the soil surface, (ii) mixing of inoculated farmyard manure with the top 10 cm of soil, (iii) addition of inoculated slurry on the soil surface, and (iv) injection of inoculated slurry into the top 10 cm of the soil. Homogeneity of water distribution in the soil profile was confirmed by a nondestructive nuclear magnetic resonance method. Survival data were fitted to a modified logistic model, and estimated survival times were compared. In the second set of experiments, pathogen-inoculated farmyard manure or slurry was applied to soil columns with 1-month-old lettuce plants. More pathogen cells percolated to greater depths after slurry than after manure application. Survival of E. coli O157:H7 was significantly longer in soil with slurry than in that with manure, while survival of Salmonella serovar Typhimurium was equally high with manure and slurry. The densities of the pathogens were not different in the rhizosphere compared to the bulk soil with manure, while the densities were higher by 0.88 ± 0.11 and 0.71 ± 0.23 log CFU per g (dry weight), respectively, in the rhizosphere than in bulk soil after slurry application. Our results suggest that surface application of manure may decrease the risk of contamination of groundwater and lettuce roots compared to injection of slurry. PMID:19270130

  19. Percolation and survival of Escherichia coli O157:H7 and Salmonella enterica serovar Typhimurium in soil amended with contaminated dairy manure or slurry.

    PubMed

    Semenov, Alexander V; van Overbeek, Leo; van Bruggen, Ariena H C

    2009-05-01

    The effect of cattle manure and slurry application on percolation and survival of Escherichia coli O157:H7 and Salmonella enterica serovar Typhimurium was investigated for different soil depths after the addition of water. Four treatments were chosen for the first set of experiments: (i) addition of inoculated farmyard manure on the soil surface, (ii) mixing of inoculated farmyard manure with the top 10 cm of soil, (iii) addition of inoculated slurry on the soil surface, and (iv) injection of inoculated slurry into the top 10 cm of the soil. Homogeneity of water distribution in the soil profile was confirmed by a nondestructive nuclear magnetic resonance method. Survival data were fitted to a modified logistic model, and estimated survival times were compared. In the second set of experiments, pathogen-inoculated farmyard manure or slurry was applied to soil columns with 1-month-old lettuce plants. More pathogen cells percolated to greater depths after slurry than after manure application. Survival of E. coli O157:H7 was significantly longer in soil with slurry than in that with manure, while survival of Salmonella serovar Typhimurium was equally high with manure and slurry. The densities of the pathogens were not different in the rhizosphere compared to the bulk soil with manure, while the densities were higher by 0.88 +/- 0.11 and 0.71 +/- 0.23 log CFU per g (dry weight), respectively, in the rhizosphere than in bulk soil after slurry application. Our results suggest that surface application of manure may decrease the risk of contamination of groundwater and lettuce roots compared to injection of slurry.

  20. Potential bioactivity and association of 17ß-estradiol with the dissolved and colloidal fractions of manure and soil

    USDA-ARS?s Scientific Manuscript database

    The dissolved (DF) and colloidal fractions (CF) of soil and manure may play an important role in the environmental fate and transport of steroidal estrogens, therefore, the first objective of this study was to quantify the association of [14C]17ß-estradiol (E2) with the DF and CF isolated from (i) l...

  1. Can cover crop and manure maintain or improve soil properties after stover removal from irrigated no-till corn?

    USDA-ARS?s Scientific Manuscript database

    Addition of cover crops and animal manure following corn (Zea mays L.) stover removal for expanded uses may mitigate negative soil property effects of stover removal. We studied the short-term (3 yr) cumulative impacts of stover removal with and without winter rye (Secale cereale L.) cover crop or a...

  2. Spatiotemporal soil organic carbon dynamics in irrigated corn silage-alfalfa production systems receiving liquid dairy manure

    USDA-ARS?s Scientific Manuscript database

    Accurately measuring soil organic C (SOC) stock changes over time is essential for verifying agronomic management effects on C sequestration. This study quantified the spatial and temporal changes in SOC stocks on adjacent 65-ha corn silage-alfalfa production fields receiving liquid dairy manure in...

  3. Influence of management practices on microbial nitrogen cyclers in agricultural soils

    NASA Astrophysics Data System (ADS)

    García-Orenes, Fuensanta; Morugán-Coronado, Alicia; McMillan, Mary; Pereg, Lily

    2016-04-01

    Agricultural land management has great influences on soil properties, in particular on microbial communities, due to their sensitivity to the perturbations of the soils. This is even more relevant in Mediterranean agricultural areas under semi-arid conditions. The Mediterranean belt is suffering from an intense degradation of its soils due to the millennia of intense land use and due to unsustainable management practices. As a consequence this area is suffering from a depletion of N content. In this work we investigated the effect of several traditional agricultural management practices on specific functional groups related to the nitrogen cycle in the soil. A field experiment was performed with orchard orange trees (citrus sinesis) in Eastern Spain to assess the long-term effects of ploughing with inorganic fertilization (PI) and ecological practices (EP) (chipped pruned branches and weeds as well as manure from sheep and goats) on microbes that can undertake nitrogen fixation and denitrification. Nine samples of soil were taken from every treatment, near the drip irrigation point and in a zone without the influence of drip irrigation (between trees row), and total DNA extracted. DNA samples were stored at minus-20°C to be analysed by qPCR. Microbial populations involved in the N biochemical cycle were analysed by targeted amplification of key functional biomarker genes: the abundance of nifH (nitrogen fixation), nirS, nirK and nosZ (denitrification) detected by quantitative PCR (qPCR) has shown significant differences between treatments with higher abundance of all four genes in soils from ecological agricultural treatments. This may indicate that the ecological treatment created conditions that are more suitable for N cyclers in the soil and a better fertility and quality status of these soils.

  4. Influence of farmyard manure on some morphological and biochemical parameters of cowpea (Vigna unguiculata) seedling grown in cadmium-treated soil.

    PubMed

    Asagba, Samuel Ogheneovo; Ezedom, Theresa; Kadiri, Helen

    2017-09-01

    The present study aims to assess the effects of the two kinds of farmyard manure (poultry and pig manures) as amendments for soil on cadmium (Cd) toxicity in plants using cowpea seedlings as plant model. Cd toxicity was evaluated by assessing the effect of the metal on the growth rate and antioxidant status as well as the ability of the plant to metabolise xenobiotic. There was a significantly (p < 0.05) increased concentration of Cd in the root, stem and leaves of cowpea seedlings grown in all the treated soils relative to control. Addition of poultry manure to the soil significantly (p < 0.05) decreased the level of Cd in these component parts of the seedlings and their corresponding bioaccumulation factor in a dose-dependent manner as compared with treatments with Cd pollution without manure addition and Cd pollution with pig manure addition. There was restoration of Cd-induced effect on growth rate parameters to levels comparable to controls in cowpea seedlings grown in Cd-treated soil augmented with poultry manure but not in cowpea seedlings in cadmium-treated soil with pig manure amendments. Similarly, augmentation of Cd-treated soil with pig manure did not alter the Cd-induced effect on the levels of superoxide dismutase (SOD) and lipid peroxidation (LPO) in leaf, stem and roots, as SOD remained significantly (p < 0.05) decreased and LPO increased relative to control. On the other hand, the levels of SOD and LPO in these parts of cowpea seedlings grown in Cd-treated soils amended with poultry manure were restored to a level not significantly (p > 0.05) different from control. Like in the case of SOD, the Cd-induced inhibition of the activity of xenobiotic metabolising enzymes, aldehyde oxidase and sulphite oxidase remained significantly (p < 0.05) decreased in the organs of seedling grown in Cd-treated soil amended with pig manure. Conversely, the Cd-induced effect on the activities of these enzymes was reversed in the organs of seedlings exposed

  5. Application of manures to mitigate the harmful effects of electrokinetic remediation of heavy metals on soil microbial properties in polluted soils.

    PubMed

    Tahmasbian, Iman; Safari Sinegani, Ali Akbar; Nguyen, Thi Thu Nhan; Che, Rongxiao; Phan, Thuc D; Hosseini Bai, Shahla

    2017-09-26

    Ethylenediaminetetraacetic acid (EDTA) used with electrokinetic (EK) to remediate heavy metal-polluted soils is a toxic chelate for soil microorganisms. Therefore, this study aimed to evaluate the effects of alternative organic chelates to EDTA on improving the microbial properties of a heavy metal-polluted soil subjected to EK. Cow manure extract (CME), poultry manure extract (PME) and EDTA were applied to a lead (Pb) and zinc (Zn)-polluted calcareous soil which were subjected to two electric intensities (1.1 and 3.3 v/cm). Soil carbon pools, microbial activity, microbial abundance (e.g., fungal, actinomycetes and bacterial abundances) and diethylenetriaminepentaacetic acid (DTPA)-extractable Pb and Zn (available forms) were assessed in both cathodic and anodic soils. Applying the EK to soil decreased all the microbial variables in the cathodic and anodic soils in the absence or presence of chelates. Both CME and PME applied with two electric intensities decreased the negative effect of EK on soil microbial variables. The lowest values of soil microbial variables were observed when EK was combined with EDTA. The following order was observed in values of soil microbial variables after treating with EK and chelates: EK + CME or EK + PME > EK > EK + EDTA. The CME and PME could increase the concentrations of available Pb and Zn, although the increase was less than that of EDTA. Overall, despite increasing soil available Pb and Zn, the combination of EK with manures (CME or PME) mitigated the negative effects of using EK on soil microbial properties. This study suggested that the synthetic chelates such as EDTA could be replaced with manures to alleviate the environmental risks of EK application.

  6. Nitrogen dynamics in soil amended with manures composted in dynamic and static systems.

    PubMed

    Escudero, Ania; González-Arias, Ander; del Hierro, Oscar; Pinto, Miriam; Gartzia-Bengoetxea, Nahia

    2012-10-15

    The main objectives of this study were to evaluate the stability of three different composts and to study the N dynamics in soil incubated with the composts under laboratory conditions. The composts were produced from sheep manure processed by static pile composting (C1) and from cattle and sheep manure processed by dynamic pile composting (C2 and C3 respectively). Laboratory incubation assays were carried out at 28 °C to determine the amount of N mineralized and N leached under extreme rainfall conditions in the first 30 days after application of doses of each compost equivalent to 170 and 450 kg ha(-1) of N. There were no differences in the values of these parameters in samples of the composts produced by the static (C1) and dynamic (C3) systems, and both composts behaved in the same way when applied to soil. The chemical characteristics of the three final composts, the respiration rates and the lack of stimulation of total microbial biomass indicated that the composts were stable. However, the final C/N ratio was slightly higher in C2 than in C1 and C3 (14 compared with 10 and 11) as was the respiration rate of the high dose of C2 indicating that C2 was more labile, and thus less stable than C1 and C3. Compost C2 generated the highest N mineralization rates after application of different doses (6.5 and 13.1%), as well as the highest N supplying potential (54.7 and 36.2%), and thus the highest rate of mineral N leaching (16.8 and 16.5 mg L(-1) of NO(3)-N), probably as a result of the slight difference in lability. The N release after compost application was very low and thus the leaching potential was also low, indicating that high doses of mature compost (>170 kg ha(-1) of N) could be applied to soil.

  7. Toward optimal soil organic carbon sequestration with effects of agricultural management practices and climate change in Tai-Lake paddy soils of China

    SciTech Connect

    Zhang, Liming; Zhuang, Qianlai; He, Yujie; Liu, Yaling; Yu, Dongsheng; Zhao, Quanying; Shi, Xuezheng; Xing, Shihe; Wang, Guangxiang

    2016-08-01

    Understanding the impacts of climate change and agricultural management practices on soil organic carbon (SOC) dynamics is critical for implementing optimal farming practices and maintaining agricultural productivity. This study examines the influence of climate and agricultural management on carbon sequestration potentials in Tai-Lake Paddy soils of China using the DeNitrification-DeComposition (DNDC) model, with a high-resolution soil database (1:50,000). Model simulations considered the effects of no tillage, increasing manure application, increasing/decreasing of N-fertilizer application and crop residues, water management, and climatic shifts in temperature and precipitation. We found that the carbon sequestration potential for the 2.32 Mha paddy soils of the Tai-Lake region varied from 4.71 to 44.31 Tg C during the period 2001-2019, with an annual average SOC changes ranged from 107 to 1005 kg C ha-1 yr-1. The sequestration potential significantly increased with increasing application of N-fertilizer, manure, conservation tillage, and crop residues. To increase soil C sequestration in this region, no-tillage and increasing of crop residue return to soils and manure application are recommended. Our analysis of climate impacts on SOC sequestration suggests that the rice paddies in this region will continue to be a carbon sink under future warming conditions. In addition, because the region’s annual precipitation (>1200 mm) is high, we also recommend reducing irrigation water use for these rice paddies to conserve freshwater in the Tai-Lake region.

  8. Occurrence of antibiotics in soils and manures from greenhouse vegetable production bases of Beijing, China and an associated risk assessment.

    PubMed

    Li, Cheng; Chen, Jiayi; Wang, Jihua; Ma, Zhihong; Han, Ping; Luan, Yunxia; Lu, Anxiang

    2015-07-15

    The occurrence of 15 antibiotics in soil and manure samples from 11 large-scale greenhouse vegetable production (GVP) bases in Beijing, China was investigated. Results showed that the greenhouse soils were ubiquitously contaminated with antibiotics, and that antibiotic concentrations were significantly higher in greenhouses than in open field soils. The mean concentrations of four antibiotic classes decreased in the following order: tetracyclines (102μg/kg)>quinolones (86μg/kg)>sulfonamides (1.1μg/kg)>macrolides (0.62μg/kg). This investigation also indicated that fertilization with manure and especially animal feces might be the primary source of antibiotics. A risk assessment based on the calculated risk quotients (RQs) demonstrated that oxytetracycline, chlortetracycline, norfloxacin, ciprofloxacin and enrofloxacin could pose a high risk to soil organisms. These results suggested that the ecological effects of antibiotic contamination in GVP bases and their potential adverse risks on human health need to be given special attention.

  9. Quantification of residual antibiotics in cow manure being spread over agricultural land and assessment of their behavioral effects on antibiotic resistant bacteria.

    PubMed

    Yeom, Ji-Ran; Yoon, Soon-Uk; Kim, Chang-Gyun

    2017-09-01

    Antibiotic resistant bacteria (ARB) in livestock manure used as fertilizer and spread over agriculture land, may pose a threat to the health of humans. Considering this, the concentrations of tetracycline (TC), oxytetracycline (OTC), and sulfathiazole (STZ) in the surface soil were quantified using LC-MS. These antibiotics have been used in livestock and are found in fertilizer produced from livestock excretions. Species of ABR were identified using 16S rDNA. Soil samples were collected at depths of 0, 7, and 15 cm from farmland in Incheon (South Korea). In the surface soil, three compounds were detected: TC (17.74 μg/kg), OTC (0.78 μg/kg), and STZ (0.23 μg/kg). However, except for STZ, antibiotics were not detected in the deeper samples. Overall, TC can form a chelated complex with cations, which consequently enhances its adsorption to the organic matter and metals in soil. This property can significantly reduce the mobility of TC (to lower than that of STZ). The result of 16S rDNA gene analysis indicated that Pseudomonas spp., Arthrobacter spp., and Rhodococcus spp. showed persistent resistance to the three antibiotics tested. DNA quantification results revealed strong resistance of Pseudomonas spp. to STZ, whereas Arthrobacter spp. and Rhodococcus spp. had resistance to TC and OTC. Antibiotics biodegradation suggested ability of ARB to grow in soil samples in presence of residual antibiotics during 13 days incubation. The concentrations of STZ, TC, and OTC reduced as much as 23.53, 35.60 and 66.88%, respectively. Copyright © 2017 Elsevier Ltd. All rights reserved.

  10. Urban cultivation in allotments maintains soil qualities adversely affected by conventional agriculture.

    PubMed

    Edmondson, Jill L; Davies, Zoe G; Gaston, Kevin J; Leake, Jonathan R

    2014-08-01

    Modern agriculture, in seeking to maximize yields to meet growing global food demand, has caused loss of soil organic carbon (SOC) and compaction, impairing critical regulating and supporting ecosystem services upon which humans also depend. Own-growing makes an important contribution to food security in urban areas globally, but its effects on soil qualities that underpin ecosystem service provision are currently unknown. We compared the main indicators of soil quality; SOC storage, total nitrogen (TN), C : N ratio and bulk density (BD) in urban allotments to soils from the surrounding agricultural region, and between the allotments and other urban greenspaces in a typical UK city. A questionnaire was used to investigate allotment management practices that influence soil properties. Allotment soils had 32% higher SOC concentrations and 36% higher C : N ratios than pastures and arable fields and 25% higher TN and 10% lower BD than arable soils. There was no significant difference between SOC concentration in allotments and urban non-domestic greenspaces, but it was higher in domestic gardens beneath woody vegetation. Allotment soil C : N ratio exceeded that in non-domestic greenspaces, but was lower than that in garden soil. Three-quarters of surveyed allotment plot holders added manure, 95% composted biomass on-site, and many added organic-based fertilizers and commercial composts. This may explain the maintenance of SOC, C : N ratios, TN and low BD, which are positively associated with soil functioning. Synthesis and applications. Maintenance and protection of the quality of our soil resource is essential for sustainable food production and for regulating and supporting ecosystem services upon which we depend. Our study establishes, for the first time, that small-scale urban food production can occur without the penalty of soil degradation seen in conventional agriculture, and maintains the high soil quality seen in urban greenspaces. Given the

  11. Urban cultivation in allotments maintains soil qualities adversely affected by conventional agriculture

    PubMed Central

    Edmondson, Jill L; Davies, Zoe G; Gaston, Kevin J; Leake, Jonathan R

    2014-01-01

    Modern agriculture, in seeking to maximize yields to meet growing global food demand, has caused loss of soil organic carbon (SOC) and compaction, impairing critical regulating and supporting ecosystem services upon which humans also depend. Own-growing makes an important contribution to food security in urban areas globally, but its effects on soil qualities that underpin ecosystem service provision are currently unknown. We compared the main indicators of soil quality; SOC storage, total nitrogen (TN), C : N ratio and bulk density (BD) in urban allotments to soils from the surrounding agricultural region, and between the allotments and other urban greenspaces in a typical UK city. A questionnaire was used to investigate allotment management practices that influence soil properties. Allotment soils had 32% higher SOC concentrations and 36% higher C : N ratios than pastures and arable fields and 25% higher TN and 10% lower BD than arable soils. There was no significant difference between SOC concentration in allotments and urban non-domestic greenspaces, but it was higher in domestic gardens beneath woody vegetation. Allotment soil C : N ratio exceeded that in non-domestic greenspaces, but was lower than that in garden soil. Three-quarters of surveyed allotment plot holders added manure, 95% composted biomass on-site, and many added organic-based fertilizers and commercial composts. This may explain the maintenance of SOC, C : N ratios, TN and low BD, which are positively associated with soil functioning. Synthesis and applications. Maintenance and protection of the quality of our soil resource is essential for sustainable food production and for regulating and supporting ecosystem services upon which we depend. Our study establishes, for the first time, that small-scale urban food production can occur without the penalty of soil degradation seen in conventional agriculture, and maintains the high soil quality seen in urban greenspaces. Given the

  12. Can Organic Materials Reduce Excess Nutrient Leaching from Manure-Rich Paddock Soils?

    PubMed

    Parvage, Mohammed Masud; Ulén, Barbro; Kirchmann, Holger

    2017-01-01

    Horse paddocks have been identified as a significant contributor of animal waste nutrients to natural waters; thus, modified paddock management is needed. Because chemical amendments pose a health risk to horses, an alternative for reducing nutrient translocation from manure is to add available organic residues to the soil. To examine the feasibility of outdoor use of organic materials to reduce nutrient losses from paddock soils, three commonly available organic materials (peat, wheat straw, and wood chips) were tested for their nutrient retention capacities in batch experiments followed by leaching experiments in an in-house lysimeter station using artificial rainfall. Results showed that the grounded peat and wood chips retained some phosphorus (P), whereas grounded wheat straw released P to the solution. In leaching experiments, peat reduced nitrogen (N) losses by 40% but increased P and carbon (C) losses severalfold. Wheat straw was ineffective in reducing P, N, or C losses and in some cases increased the losses. Wood chips effectively reduced P and C losses, by 70 and 40%, respectively, but not N losses. It was concluded that, among the three organic materials, only the wood chips can be used outdoors to reduce nutrient losses from paddock soils. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  13. Method for detection and enumeration of Cryptosporidium parvum oocysts in feces, manures, and soils.

    PubMed

    Kuczynska, E; Shelton, D R

    1999-07-01

    Eight concentration and purification methods were evaluated to determine percentages of recovery of Cryptosporidium parvum oocysts from calf feces. The NaCl flotation method generally resulted in the highest percentages of recovery. Based on the percentages of recovery, the amounts of fecal debris in the final oocyst preparations, the relatively short processing time (<3 h), and the low expense, the NaCl flotation method was chosen for further evaluation. Extraction efficiency was evaluated by using oocyst concentrations of 25, 50, 10(2), 10(3), 10(4), and 10(5) oocysts g of bovine feces-1. The percentages of recovery ranged from 10.8% (25 oocysts g-1) to 17.0% (10(4) oocysts g-1) (r2 = 0.996). A conservative estimate of the detection limit for bovine feces is ca. 30 oocysts g of feces-1. Percentages of recovery were determined for six different types of animal feces (cow, horse, pig, sheep, deer, and chicken feces) at a single oocyst concentration (10(4) oocysts g-1). The percentages of recovery were highest for bovine feces (17. 0%) and lowest for chicken feces (3.2%). Percentages of recovery were determined for bovine manure after 3 to 7 days of storage. The percentages of recovery ranged from 1.9 to 3.5% depending on the oocyst concentration, the time of storage, and the dispersing solution. The percentages of oocyst recovery from soils were evaluated by using different flotation solutions (NaCl, cold sucrose, ZnSO4), different dispersing solutions (Triton X-100, Tween 80, Tris plus Tween 80), different dispersion techniques (magnetic stirring, sonication, blending), and different dispersion times (5, 15, and 30 min). Twenty-five-gram soil samples were used to reduce the spatial variability. The highest percentages of recovery were obtained when we used 50 mM Tris-0.5% Tween 80 as the dispersing solution, dispersion for 15 min by stirring, and saturated NaCl as the flotation solution. The percentages of oocyst recovery from freshly spiked sandy loam, silty clay

  14. Sampling for Soil Carbon Stock Assessment in Rocky Agricultural Soils

    NASA Technical Reports Server (NTRS)

    Beem-Miller, Jeffrey P.; Kong, Angela Y. Y.; Ogle, Stephen; Wolfe, David

    2016-01-01

    Coring methods commonly employed in soil organic C (SOC) stock assessment may not accurately capture soil rock fragment (RF) content or soil bulk density (rho (sub b)) in rocky agricultural soils, potentially biasing SOC stock estimates. Quantitative pits are considered less biased than coring methods but are invasive and often cost-prohibitive. We compared fixed-depth and mass-based estimates of SOC stocks (0.3-meters depth) for hammer, hydraulic push, and rotary coring methods relative to quantitative pits at four agricultural sites ranging in RF content from less than 0.01 to 0.24 cubic meters per cubic meter. Sampling costs were also compared. Coring methods significantly underestimated RF content at all rocky sites, but significant differences (p is less than 0.05) in SOC stocks between pits and corers were only found with the hammer method using the fixed-depth approach at the less than 0.01 cubic meters per cubic meter RF site (pit, 5.80 kilograms C per square meter; hammer, 4.74 kilograms C per square meter) and at the 0.14 cubic meters per cubic meter RF site (pit, 8.81 kilograms C per square meter; hammer, 6.71 kilograms C per square meter). The hammer corer also underestimated rho (sub b) at all sites as did the hydraulic push corer at the 0.21 cubic meters per cubic meter RF site. No significant differences in mass-based SOC stock estimates were observed between pits and corers. Our results indicate that (i) calculating SOC stocks on a mass basis can overcome biases in RF and rho (sub b) estimates introduced by sampling equipment and (ii) a quantitative pit is the optimal sampling method for establishing reference soil masses, followed by rotary and then hydraulic push corers.

  15. Sampling for Soil Carbon Stock Assessment in Rocky Agricultural Soils

    NASA Technical Reports Server (NTRS)

    Beem-Miller, Jeffrey P.; Kong, Angela Y. Y.; Ogle, Stephen; Wolfe, David

    2016-01-01

    Coring methods commonly employed in soil organic C (SOC) stock assessment may not accurately capture soil rock fragment (RF) content or soil bulk density (rho (sub b)) in rocky agricultural soils, potentially biasing SOC stock estimates. Quantitative pits are considered less biased than coring methods but are invasive and often cost-prohibitive. We compared fixed-depth and mass-based estimates of SOC stocks (0.3-meters depth) for hammer, hydraulic push, and rotary coring methods relative to quantitative pits at four agricultural sites ranging in RF content from less than 0.01 to 0.24 cubic meters per cubic meter. Sampling costs were also compared. Coring methods significantly underestimated RF content at all rocky sites, but significant differences (p is less than 0.05) in SOC stocks between pits and corers were only found with the hammer method using the fixed-depth approach at the less than 0.01 cubic meters per cubic meter RF site (pit, 5.80 kilograms C per square meter; hammer, 4.74 kilograms C per square meter) and at the 0.14 cubic meters per cubic meter RF site (pit, 8.81 kilograms C per square meter; hammer, 6.71 kilograms C per square meter). The hammer corer also underestimated rho (sub b) at all sites as did the hydraulic push corer at the 0.21 cubic meters per cubic meter RF site. No significant differences in mass-based SOC stock estimates were observed between pits and corers. Our results indicate that (i) calculating SOC stocks on a mass basis can overcome biases in RF and rho (sub b) estimates introduced by sampling equipment and (ii) a quantitative pit is the optimal sampling method for establishing reference soil masses, followed by rotary and then hydraulic push corers.

  16. Sampling for Soil Carbon Stock Assessment in Rocky Agricultural Soils

    NASA Technical Reports Server (NTRS)

    Beem-Miller, Jeffrey P.; Kong, Angela Y. Y.; Ogle, Stephen; Wolfe, David

    Coring methods commonly employed in soil organic C (SOC) stock assessment may not accurately capture soil rock fragment (RF) content or soil bulk density (rho (sub b)) in rocky agricultural soils, potentially biasing SOC stock estimates. Quantitative pits are considered less biased than coring methods but are invasive and often cost-prohibitive. We compared fixed-depth and mass-based estimates of SOC stocks (0.3-meters depth) for hammer, hydraulic push, and rotary coring methods relative to quantitative pits at four agricultural sites ranging in RF content from less than 0.01 to 0.24 cubic meters per cubic meter. Sampling costs were also compared. Coring methods significantly underestimated RF content at all rocky sites, but significant differences (p is less than 0.05) in SOC stocks between pits and corers were only found with the hammer method using the fixed-depth approach at the less than 0.01 cubic meters per cubic meter RF site (pit, 5.80 kilograms C per square meter; hammer, 4.74 kilograms C per square meter) and at the 0.14 cubic meters per cubic meter RF site (pit, 8.81 kilograms C per square meter; hammer, 6.71 kilograms C per square meter). The hammer corer also underestimated rho (sub b) at all sites as did the hydraulic push corer at the 0.21 cubic meters per cubic meter RF site. No significant differences in mass-based SOC stock estimates were observed between pits and corers. Our results indicate that (i) calculating SOC stocks on a mass basis can overcome biases in RF and rho (sub b) estimates introduced by sampling equipment and (ii) a quantitative pit is the optimal sampling method for establishing reference soil masses, followed by rotary and then hydraulic push corers.

  17. Co-pyrolyzing plastic mulch waste with animal manures

    USDA-ARS?s Scientific Manuscript database

    Pyrolyzing various livestock and agricultural wastes produces power and value-added byproducts. It also substantially reduces ultimate waste volume to be disposed of and improves soil fertility and promotes carbon sequestration via soil application of biochar. Researchers found that manure-derived ...

  18. Long-term combined chemical and manure fertilizations increase soil organic carbon and total nitrogen in aggregate fractions at three typical cropland soils in China.

    PubMed

    He, Y T; Zhang, W J; Xu, M G; Tong, X G; Sun, F X; Wang, J Z; Huang, S M; Zhu, P; He, X H

    2015-11-01

    Soil organic carbon (SOC), total nitrogen (TN), microbial biomass carbon (MBC) and nitrogen (MBN) are important factors of soil fertility. However, effects of the combined chemical fertilizer and organic manure or straw on these factors and their relationships are less addressed under long-term fertilizations. This study addressed changes in SOC, TN, MBC and MBN at 0-20 cm soil depth under three 17 years (September 1990-September 2007) long-term fertilization croplands along a heat and water gradient in China. Four soil physical fractions (coarse free and fine free particulate organic C, cfPOC and ffPOC; intra-microaggregate POC, iPOC; and mineral associated organic C, MOC) were examined under five fertilizations: unfertilized control, chemical nitrogen (N), phosphorus (P) and potassium (K) (NPK), NPK plus straw (NPKS, hereafter straw return), and NPK plus manure (NPKM and 1.5NPKM, hereafter manure). Compared with Control, manure significantly increased all tested parameters. SOC and TN in fractions distributed as MOC > iPOC > cfPOC > ffPOC with the highest increase in cfPOC (329.3%) and cfPTN (431.1%), and the lowest in MOC (40.8%) and MTN (45.4%) under manure. SOC significantly positively correlated with MBC, cfPOC, ffPOC, iPOC and MOC (R(2) = 0.51-0.84, P < 0.01), while TN with cfPTN, ffPTN, iPTN and MTN (R(2) = 0.45-0.79, P < 0.01), but not with MBN, respectively. Principal component analyses explained 86.9-91.2% variance of SOC, TN, MBC, MBN, SOC and TN in each fraction. Our results demonstrated that cfPOC was a sensitive SOC indicator and manure addition was the best fertilization for improving soil fertility while straw return should take into account climate factors in Chinese croplands.

  19. In vitro assessment of thyroidal and estrogenic activities in poultry and broiler manure.

    PubMed

    Valdehita, A; Quesada-García, A; Delgado, M M; Martín, J V; García-González, M C; Fernández-Cruz, M L; Navas, J M

    2014-02-15

    Among the many chemicals found in avian manure, endocrine disruptors (EDs), of natural or anthropogenic origin, are of special environmental concern. Nowadays, an increasing amount of estrogens is being released into the environment via the use of manure to fertilize agricultural land. While most research in this field has focused on estrogenic phenomena, little is known about alterations related to other endocrine systems, such as the thyroidal one. Here we simultaneously assessed the potential estrogenic and thyroidal activity of poultry and broiler litter manure using in vitro approaches based on estrogen receptor (Er) and thyroid receptor (Tr) transactivation assays. In addition, leaching experiments were performed to assess whether the EDs present in the manure pass through a soil column and potentially reach the groundwater. Manure from four broiler and four poultry farms was collected in two sampling campaigns carried out in two seasons (fall and spring). Extracts from broiler and poultry manure exhibited strong thyroidal activity. Only poultry manure showed estrogenic activity, which is consistent with the low levels of estrogens expected in hatchlings. Leakage experiments were performed in columns with two kinds of arable soils: sandy and loamy. No estrogenicity or thyroidal activity was detectable in soils treated with the manure or in the corresponding leachates. These results indicate that substances with estrogenic or thyroidal activity were degraded in the soil under our experimental conditions. However, the long-term effects associated with the constant and intensive application of manure to agricultural land in some regions require further research.

  20. Contamination of soils with microbial pathogens originating from effluent water used for agricultural irrigation

    NASA Astrophysics Data System (ADS)

    Bernstein, N.

    2009-04-01

    The use of wastewater for agricultural irrigation is steadily increasing world-wide and due to shortages of fresh water is common today in most arid regions of the world. The use of treated wastewater for agricultural irrigation may result in soil exposure to pathogens, creating potential public health problems. A variety of human pathogens are present in raw sewage water. Although their concentrations decrease during the wastewater reclamation process, the secondary treated effluents most commonly used for irrigation today still contain bacterial human pathogens. A range of bacterial pathogens, introduced through contaminated irrigation water or manure, are capable of surviving for long periods in soil and water where they have the potential to contaminate crops in the field. Therefore, there is a risk of direct contamination of crops by human pathogens from the treated effluents used for irrigation, as well as a risk of indirect contamination of the crops from contaminated soil at the agricultural site. Contradictory to previous notion, recent studies have demonstrated that human pathogens can enter plants through their roots and translocate and survive in edible, aerial plant tissues. The practical implications of these new findings for food safety are still not clear, but no doubt reflect the pathogenic microorganisms' ability to survive and multiply in the irrigated soil, water, and the harvested edible crop.

  1. Biofumigation for control of pale potato cyst nematodes: activity of brassica leaf extracts and green manures on Globodera pallida in vitro and in soil.

    PubMed

    Lord, James S; Lazzeri, Luca; Atkinson, Howard J; Urwin, Peter E

    2011-07-27

    The effects of brassica green manures on Globodera pallida were assessed in vitro and in soil microcosms. Twelve of 22 brassica accessions significantly inhibited the motility of G. pallida infective juveniles in vitro. Green manures of selected brassicas were then incorporated into soil containing encysted eggs of G. pallida. Their effect on egg viability was estimated by quantifying nematode actin 1 mRNA by RT-qPCR. The leaf glucosinolate profiles of the plants were determined by high-performance liquid chromatography. Three Brassica juncea lines (Nemfix, Fumus, and ISCI99) containing high concentrations of 2-propenyl glucosinolate were the most effective, causing over 95% mortality of encysted eggs of G. pallida in polyethylene-covered soil. The toxic effects of green manures were greater in polyethylene-covered than in open soil. Toxicity in soil correlated with the concentration of isothiocyanate-producing glucosinolate but not total glucosinolate in green manures.

  2. Phosphorus forms in animal manure and the impact on soil P status

    USDA-ARS?s Scientific Manuscript database

    Increased knowledge of manure P chemistry is needed to optimize recycling and minimize adverse environmental effects associated with land application of manure. Part I of this chapter reviews and discusses various manure P characterization methods including sequential fractionation, solution 31P nu...

  3. Phosphorus availability and early corn growth response in soil amended with turkey manure ash

    USDA-ARS?s Scientific Manuscript database

    Incinerating turkey manure is an alternative option to generate renewable energy and also to eliminate environmental problems associated with manure stockpiling. Incineration produces a turkey manure ash (TMA) with a fertilizer value of 4.3% P and 10% K. We conducted a greenhouse pot-study using a l...

  4. Method for Detection and Enumeration of Cryptosporidium parvum Oocysts in Feces, Manures, and Soils

    PubMed Central

    Kuczynska, Ewa; Shelton, Daniel R.

    1999-01-01

    Eight concentration and purification methods were evaluated to determine percentages of recovery of Cryptosporidium parvum oocysts from calf feces. The NaCl flotation method generally resulted in the highest percentages of recovery. Based on the percentages of recovery, the amounts of fecal debris in the final oocyst preparations, the relatively short processing time (<3 h), and the low expense, the NaCl flotation method was chosen for further evaluation. Extraction efficiency was evaluated by using oocyst concentrations of 25, 50, 102, 103, 104, and 105 oocysts g of bovine feces−1. The percentages of recovery ranged from 10.8% (25 oocysts g−1) to 17.0% (104 oocysts g−1) (r2 = 0.996). A conservative estimate of the detection limit for bovine feces is ca. 30 oocysts g of feces−1. Percentages of recovery were determined for six different types of animal feces (cow, horse, pig, sheep, deer, and chicken feces) at a single oocyst concentration (104 oocysts g−1). The percentages of recovery were highest for bovine feces (17.0%) and lowest for chicken feces (3.2%). Percentages of recovery were determined for bovine manure after 3 to 7 days of storage. The percentages of recovery ranged from 1.9 to 3.5% depending on the oocyst concentration, the time of storage, and the dispersing solution. The percentages of oocyst recovery from soils were evaluated by using different flotation solutions (NaCl, cold sucrose, ZnSO4), different dispersing solutions (Triton X-100, Tween 80, Tris plus Tween 80), different dispersion techniques (magnetic stirring, sonication, blending), and different dispersion times (5, 15, and 30 min). Twenty-five-gram soil samples were used to reduce the spatial variability. The highest percentages of recovery were obtained when we used 50 mM Tris–0.5% Tween 80 as the dispersing solution, dispersion for 15 min by stirring, and saturated NaCl as the flotation solution. The percentages of oocyst recovery from freshly spiked sandy loam, silty clay

  5. Food web responses to augmenting the entomopathogenic nematodes in bare and animal manure-mulched soil.

    PubMed

    Duncan, L W; Graham, J H; Zellers, J; Bright, D; Dunn, D C; El-Borai, F E; Porazinska, D L

    2007-06-01

    Factorial treatments of entomopathogenic nematodes (EPN) and composted, manure mulches were evaluated for two years in a central Florida citrus orchard to study the post-application biology of EPN used to manage the root weevil, Diaprepes abbreviatus. Mulch treatments were applied once each year to study the effects of altering the community of EPN competitors (free-living bactivorous nematodes) and antagonists (nematophagous fungi (NF), predaceous nematodes and some microarthro-pods). EPN were augmented once with Steinernema riobrave in 2004 and twice in 2005. Adding EPN to soil affected the prevalence of organisms at several trophic levels, but the effects were often ephemeral and sometimes inconsistent. EPN augmentation always increased the mortality of sentinel weevil larvae, the prevalence of free-living nematodes in sentinel cadavers and the prevalence of trapping NF. Subsequent to the insecticidal effects of EPN augmentation in 2004, but not 2005, EPN became temporarily less prevalent, and fewer sentinel weevil larvae died in EPN-augmented compared to non-augmented plots. Manure mulch had variable effects on endoparasitic NF, but consistently decreased the prevalence of trapping NF and increased the prevalence of EPN and the sentinel mortality. Both temporal and spatial abundance of NF were inversely related to the prevalence of Steinernema diaprepesi, whereas Heterorhabditis zealandica prevalence was positively correlated with NF over time. The number of weevil larvae killed by EPN was likely greatest in 2005, due in part to non-target effects of augmentation on the endemic EPN community in 2004 that occurred during a period of peak weevil recruitment into the soil.

  6. Food Web Responses to Augmenting the Entomopathogenic Nematodes in Bare and Animal Manure-Mulched Soil

    PubMed Central

    Duncan, L. W.; Graham, J. H.; Zellers, J.; Bright, D.; Dunn, D. C.; El-Borai, F. E.; Porazinska, D. L.

    2007-01-01

    Factorial treatments of entomopathogenic nematodes (EPN) and composted, manure mulches were evaluated for two years in a central Florida citrus orchard to study the post-application biology of EPN used to manage the root weevil, Diaprepes abbreviatus. Mulch treatments were applied once each year to study the effects of altering the community of EPN competitors (free-living bactivorous nematodes) and antagonists (nematophagous fungi (NF), predaceous nematodes and some microarthro-pods). EPN were augmented once with Steinernema riobrave in 2004 and twice in 2005. Adding EPN to soil affected the prevalence of organisms at several trophic levels, but the effects were often ephemeral and sometimes inconsistent. EPN augmentation always increased the mortality of sentinel weevil larvae, the prevalence of free-living nematodes in sentinel cadavers and the prevalence of trapping NF. Subsequent to the insecticidal effects of EPN augmentation in 2004, but not 2005, EPN became temporarily less prevalent, and fewer sentinel weevil larvae died in EPN-augmented compared to non-augmented plots. Manure mulch had variable effects on endoparasitic NF, but consistently decreased the prevalence of trapping NF and increased the prevalence of EPN and the sentinel mortality. Both temporal and spatial abundance of NF were inversely related to the prevalence of Steinernema diaprepesi, whereas Heterorhabditis zealandica prevalence was positively correlated with NF over time. The number of weevil larvae killed by EPN was likely greatest in 2005, due in part to non-target effects of augmentation on the endemic EPN community in 2004 that occurred during a period of peak weevil recruitment into the soil. PMID:19259487

  7. The Temperature Dependence of Soil Moisture Characteristics of Agricultural Soils

    NASA Astrophysics Data System (ADS)

    Salehzadeh, Amir

    1990-01-01

    limits the speed of measurement for typical agricultural soils to about 12-14 hours for each main branch over the potential range 0 to -2000 cm. (2) Although the stripper tensiometer can operate with soil air presures greater than 2 atmospheres gauge, the tensiometer contact problem appears likely to limit the range, at least for certain soils.

  8. Some key environmental variables controlling nitrous oxide emissions from agricultural and semi-natural soils in Scotland

    NASA Astrophysics Data System (ADS)

    Skiba, U. M.; Sheppard, L. J.; Macdonald, J.; Fowler, D.

    Soil N 2O emissions were measured from a range of mineral soils (22 sites) supporting woodlands, grassland and agriculture between 1991 and 1996 and were co-analysed in order to establish some overriding relationships between the N 2O emission and soil temperature, water content, available NH +4 and NO -3, pH and N input by fertiliser, manure and atmospheric deposition. Fluxes were measured by chamber techniques. For individual sites, nitrogen, soil temperature and water content were the key variables controlling the emission rates. Nitrogen additions by fertilisation, manure and atmospheric deposition increased the emissions of N 2O. From pasture grazed by sheep 1.7% of the N input from fertiliser and animal excreta was emitted as N 2O. For an experimental sitka spruce plantation receiving acid mist and a mixed woodland in the immediate vicinity of a poultry farm losses of N 2O were estimated at 3.7 and 0.8% of the atmospheric N deposited, respectively. In spite of the large variations in land use, soil physical and chemical characteristics of the 22 data sets collected at different years and at varying frequency, the mean flux from each site could be described by following multiple regression equation: log N 2O ( μg N m -2 h -1)=-1.04+0.165∗soil temperature+0.403∗log N input (kg N ha -1 yr -1) -0.0145∗gravimetric soil water content (% soil dry weight).

  9. Acidification processes and soil leaching influenced by agricultural practices revealed by strontium isotopic ratios

    NASA Astrophysics Data System (ADS)

    Pierson-Wickmann, Anne-Catherine; Aquilina, Luc; Weyer, Christina; Molénat, Jérôme; Lischeid, Gunnar

    2009-08-01

    In natural river systems, the chemical and isotopic composition of stream- and ground waters are mainly controlled by the geology and water-rock interactions. The leaching of major cations from soils has been recognized as a possible consequence of acidic deposition from atmosphere for over 30 years. Moreover, in agricultural areas, the application of physiological acid fertilizers and nitrogen fertilizers in the ammonia form may enhance the cation leaching through the soil profile into ground- and surface waters. This origin of leached cations has been studied on two small and adjacent agricultural catchments in Brittany, western France. The study catchments are drained by two first-order streams, and mainly covered with cambisoils, issued from the alteration and weathering of a granodiorite basement. Precipitations, soil water- and NH 4 acetate-leachates, separated minerals, and stream waters have been investigated. Chemical element ratios, such as Ba/Sr, Na/Sr and Ca/Sr ratios, as well as Sr isotopic ratios are used to constrain the relative contribution from potential sources of stream water elements. Based on Sr isotopic ratio and element concentration, soil water- and NH 4 acetate leaching indicates (1) a dominant manure/slurry contribution in the top soil, representing a cation concentrated pool, with low 87Sr/ 86Sr ratios; (2) in subsoils, mineral dissolution is enhanced by fertilizer application, becoming the unique source of cations in the saprolite. The relatively high weathering rates encountered implies significant sources of cations which are not accessory minerals, but rather plagioclase and biotite dissolution. Stream water has a very different isotopic and chemical composition compared to soil water leaching suggesting that stream water chemistry is dominated by elements issued from mineral and rock weathering. Agriculture, by applications of chemical and organic fertilizers, can influence the export of major base cations, such as Na +. Plagioclase

  10. Effects of manure and mineral fertilization strategies on soil antibiotic resistance gene levels and microbial community in a paddy-upland rotation system.

    PubMed

    Lin, Hui; Sun, Wanchun; Zhang, Zulin; Chapman, Stephen J; Freitag, Thomas E; Fu, Jianrong; Zhang, Xin; Ma, Junwei

    2016-04-01

    This work investigated the responses of antibiotic resistance genes (ARGs) and the soil microbial community in a paddy-upland rotation system to mineral fertilizer (NPK) and different application dosages of manure combined with NPK. The occurrence of five tetracycline ARGs (tetA, tetB, tetC, tetG and tetW), two sulfonamide ARGs (sul1 and sul2) and one genetic element (IntI1) was quantified. NPK application showed only slight or no impact on soil ARGs abundances compared with the control without fertilizer. Soil ARGs abundances could be increased by manure-NPK application but was related to manure dosage (2250-9000 kg ha(-1)). Principal component analysis (PCA) showed that the soil ARG profile of the treatment with 9000 kg ha(-1) manure separated clearly from the other treatments; the ARGs that contributed most to the discrimination of this treatment were tetA, tetG, tetW, sul1, sul2 and IntI1. Community level physiological profile (CLPP) analysis showed that increasing manure dosage from 4500 kg ha(-1) to 9000 kg ha(-1) induced a sharp increase in almost all of the detected ARGs but would not change the microbial community at large. However, 9000 kg ha(-1) manure application produced a decline in soil microbial activity. Determination of antibiotics and heavy metals in soils suggested that the observed bloom of soil ARGs might associate closely with the accumulation of copper and zinc in soil.

  11. Fate and transport of antimicrobials and antimicrobial resistance genes in soil and runoff following land application of swine manure slurry.

    PubMed

    Joy, Stacey R; Bartelt-Hunt, Shannon L; Snow, Daniel D; Gilley, John E; Woodbury, Bryan L; Parker, David B; Marx, David B; Li, Xu

    2013-01-01

    Due to the use of antimicrobials in livestock production, residual antimicrobials and antimicrobial resistance genes (ARGs) could enter the environment following the land application of animal wastes and could further contaminate surface and groundwater. The objective of this study was to determine the effect of various manure land application methods on the fate and transport of antimicrobials and ARGs in soil and runoff following land application of swine manure slurry. Swine manure slurries were obtained from facilities housing pigs that were fed chlortetracyline, tylosin or bacitracin and were land applied via broadcast, incorporation, and injection methods. Three rainfall simulation tests were then performed on amended and control plots. Results show that land application methods had no statistically significant effect on the aqueous concentrations of antimicrobials in runoff. However, among the three application methods tested broadcast resulted in the highest total mass loading of antimicrobials in runoff from the three rainfall simulation tests. The aqueous concentrations of chlortetracyline and tylosin in runoff decreased in consecutive rainfall events, although the trend was only statistically significant for tylosin. For ARGs, broadcast resulted in significantly higher erm genes in runoff than did incorporation and injection methods. In soil, the effects of land application methods on the fate of antimicrobials in top soil were compound specific. No clear trend was observed in the ARG levels in soil, likely because different host cells may respond differently to the soil environments created by various land application methods.

  12. Effect of the chemical composition of green manure crops on humus formation in a Soddy-Podzolic soil

    NASA Astrophysics Data System (ADS)

    Tripolskaja, L.; Romanovskaja, D.; Slepetiene, A.; Razukas, A.; Sidlauskas, G.

    2014-04-01

    The effects of different types of green manure ( Trifolium pratense L., Dactylis glomerata L., and Secale cereale L.) and the time of its input into the soil (autumn and spring) on the contents of humus and labile humus substances in a soddy-podzolic soil and the relationship between the formation of humus and the chemical composition of the applied biomass were studied. Green manure had a positive effect on the accumulation of humus in the soil. When the plants were plowed into the soil in the fall, the amount of humus formed in the soil in the first year was 0.1% higher in comparison with the spring application of green manure. The most active synthesis of new humus substances took place upon the following properties of the plant biomass: C: N = 15-25, the cellulose content of 20-28%, and the lignin content of 14-17%. The highest amount of labile humus substances was formed during the decomposition of the biomass with the C: N ratio above 20, the cellulose content of 19-20%, and the lignin content of 14-16%.

  13. Economic feasibility of no-tillage and manure for soil carbon sequestration in corn production in northeastern Kansas.

    PubMed

    Pendell, Dustin L; Williams, Jeffery R; Rice, Charles W; Nelson, Richard G; Boyles, Scott B

    2006-01-01

    This study examined the economic potential of no-tillage versus conventional tillage to sequester soil carbon by using two rates of commercial N fertilizer or beef cattle manure for continuous corn (Zea mays L.) production. Yields, input rates, field operations, and prices from an experiment were used to simulate a distribution of net returns for eight production systems. Carbon release values from direct, embodied, and feedstock energies were estimated for each system, and were used with soil carbon sequestration rates from soil tests to determine the amount of net carbon sequestered by each system. The values of carbon credits that provide an incentive for managers to adopt production systems that sequester carbon at greater rates were derived. No-till systems had greater annual soil carbon gains, net carbon gains, and net returns than conventional tillage systems. Systems that used beef cattle manure had greater soil carbon gains and net carbon gains, but lower net returns, than systems that used commercial N fertilizer. Carbon credits would be needed to encourage the use of manure-fertilized cropping systems.

  14. Contrasting Effects of Farmyard Manure (FYM) and Compost for Remediation of Metal Contaminated Soil.

    PubMed

    Sabir, Muhammad; Ali, Amanat; Zia-Ur-rehman, Muhammad; Hakeem, Khalid Rehman

    2015-01-01

    We investigated effect of farm yard manure (FYM) and compost applied to metal contaminated soil at rate of 1% (FYM-1, compost-1), 2% (FYM-2, compost-2), and 3% (FYM-3, compost-3). FYM significantly (P < 0.001) increased dry weights of shoots and roots while compost increased root dry weight compared to control. Amendments significantly increased nickel (Ni) in shoots and roots of maize except compost applied at 1%. FYM-3 and -1 caused maximum Ni in shoots (11.42 mg kg(-1)) and roots (80.92 mg kg(-1)), respectively while compost-2 caused maximum Ni (14.08 mg kg(-1)) and (163.87 mg kg(-1)) in shoots and roots, respectively. Plants grown in pots amended with FYM-2 and compost-1 contained minimum Cu (30.12 and 30.11 mg kg(-1)) in shoots, respectively. FYM-2 and compost-2 caused minimum zinc (Zn) (59.08 and 66.0 mg kg(-1)) in maize shoots, respectively. FYM-2 caused minimum Mn in maize shoots while compost increased Mn in shoots and roots compared to control. FYM and compost increased the ammonium bicarbonate diethylene triamine penta acetic acid (AB-DTPA) extractable Ni and Mn in the soil and decreased Cu and Zn. Lower remediation factors for all metals with compost indicated that compost was effective to stabilize the metals in soil compared to FYM.

  15. Influence of Long-term Application of Feedlot Manure Amendments on Water Repellency of a Clay Loam Soil.

    PubMed

    Miller, Jim J; Beasley, Bruce W; Hazendonk, Paul; Drury, Craig F; Chanasyk, David S

    2017-05-01

    Long-term application of feedlot manure to cropland may increase the quantity of soil organic carbon (C) and change its quality, which may influence soil water repellency. The objective was to determine the influence of feedlot manure type (stockpiled vs. composted), bedding material (straw [ST] vs. woodchips [WD]), and application rate (13, 39, or 77 Mg ha) on repellency of a clay loam soil after 17 annual applications. The repellency was determined on all 14 treatments using the water repellency index ( index), the water drop penetration time (WDPT) method, and molarity of ethanol (MED) test. The C composition of particulate organic matter in soil of five selected treatments after 16 annual applications was also determined using C nuclear magnetic resonance-direct polarization with magic-angle spinning (NMR-DPMAS). Manure type had no significant ( > 0.05) effect on index and WDPT, and MED classification was similar. Mean index and WDPT values were significantly greater and MED classification more hydrophobic for WD than ST. Application rate had no effect on the index, but WDPT was significantly greater and MED classification more hydrophobic with increasing application rate. Strong ( > 0.7) but nonsignificant positive correlations were found between index and WDPT versus hydrophobic (alkyl + aromatic) C, lignin at 74 ppm (O-alkyl), and unspecified aromatic compounds at 144 ppm. Specific aromatic compounds also contributed more to repellency than alkyl, O-alkyl, and carbonyl compounds. Overall, all three methods consistently showed that repellency was greater for WD- than ST-amended clay loam soil, but manure type had no effect. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  16. Use of a surrogate to evaluate the impact of tillage on the transport of steroid hormones from manure-amended agricultural field

    USDA-ARS?s Scientific Manuscript database

    Beef feedlot manure distributed to row crop production areas is a potential surface water contaminant source of the steroid hormones commonly used in beef cattle production. This article reports on research conducted at the University of Nebraska Haskell Agricultural Laboratory near Concord, Nebrask...

  17. Hexavalent chromium availability and phytoremediation potential of Cichorium spinosum as affect by manure, zeolite and soil ageing.

    PubMed

    Antoniadis, Vasileios; Polyzois, Theologos; Golia, Evaggelia E; Petropoulos, Spyridon A

    2017-03-01

    Cichorium spinosum (spiny chicory) is a wild edible vegetable, and a possible suitable species for Cr(VI)-phytoremediation. There are three approaches for altering Cr(VI) dynamics: reduction to Cr(III) by organic matter addition, soil ageing, and Cr(VI) retention by high binding capacity materials added to soil, e.g., zeolite. Our aim was to assess spiny chicory as a phytoremediation species in relation to these three methods of altering Cr(VI) soil dynamics. There were 5 treatments: control (C); soil with 100 mg kg(-1) Cr(VI) (S); soil with zeolite plus 100 mg kg(-1) Cr(VI) (Z); soil with manure plus 100 mg kg(-1) Cr(VI) (M); and soil added with 100 mg kg(-1) Cr(VI) one year before this experiment (AS, "aged soil"). In soil, Cr(VI) was higher at S, while Z, M and AS were lower. In plant, Cr(VI) at Z, S, and AS were similar and significantly higher than M. This indicates that added manure decrease Cr(VI) availability to chicory due to the formation of organometallic complexes. However, chicory uptake amounted to 0.26-0.40 kg Cr(VI) ha(-1) for Z, S, and AS, while uptake at M was lower. In conclusion, manure addition was more successful in decreasing Cr(VI) bioavailability, but it also slowed Cr(VI)-phytoremediation process. Copyright © 2016. Published by Elsevier Ltd.

  18. Drivers of nitrous oxide emissions during thaw of agricultural soils in the mid-continental climate of Manitoba

    NASA Astrophysics Data System (ADS)

    Tenuta, M.; Gao, X.; Amiro, B. D.; Gervais, M.; Westphal, M.

    2016-12-01

    Measures of nitrous oxide emisisons from agricultural soils during thaw are infrequent. Here we report results linking thaw emissions and soil drivers from a long-term research site using high frequency micromet monitoring of fluxes, shorter-term studies of several sites using chamber methods and those of an incubation study. Thaw emissions accounted for 1/3 of total annual N2O crop year emissions. Of soil factors examined, fall or spring surface soil nitrate, fall addition of synthetic nitrogen fertilizer or organic nitrogen as green manures, decreasing compaction, and water saturation promoted N2O thaw emissions. The results indicate denitrification of near surface soils to be the source of thaw N2O emissions. We discuss here the management practices likely to reduce emissions of N2O at thaw.

  19. Fly ash application in nutrient poor agriculture soils: impact on methanotrophs population dynamics and paddy yields.

    PubMed

    Singh, Jay Shankar; Pandey, Vimal Chandra

    2013-03-01

    There are reports that the application of fly ash, compost and press mud or a combination thereof, improves plant growth, soil microbial communities etc. Also, fly ash in combination with farmyard manure or other organic amendments improves soil physico-chemical characteristics, rice yield and microbial processes in paddy fields. However, the knowledge about the impact of fly ash inputs alone or in combination with other organic amendments on soil methanotrophs number in paddy soils is almost lacking. We hypothesized that fly ash application at lower doses in paddy agriculture soil could be a potential amendment to elevate the paddy yields and methanotrophs number. Here we demonstrate the impact of fly ash and press mud inputs on number of methanotrophs, antioxidants, antioxidative enzymatic activities and paddy yields at agriculture farm. The impact of amendments was significant for methanotrophs number, heavy metal concentration, antioxidant contents, antioxidant enzymatic activities and paddy yields. A negative correlation was existed between higher doses of fly ash-treatments and methanotrophs number (R(2)=0.833). The content of antioxidants and enzymatic activities in leaves of higher doses fly ash-treated rice plants increased in response to stresses due to heavy metal toxicity, which was negatively correlated with rice grain yield (R(2)=0.944) and paddy straw yield (R(2)=0.934). A positive correlation was noted between heavy metals concentrations and different antioxidant and enzymatic activities across different fly ash treated plots.The data of this study indicate that heavy metal toxicity of fly ash may cause oxidative stress in the paddy crop and the antioxidants and related enzymes could play a defensive role against phytotoxic damages. We concluded that fly ash at lower doses with press mud seems to offer the potential amendments to improving soil methanotrophs population and paddy crop yields for the nutrient poor agriculture soils.

  20. Green manure and long-term fertilization effects on soil zinc and cadmium availability and uptake by wheat (Triticum aestivum L.) at different growth stages.

    PubMed

    Grüter, Roman; Costerousse, Benjamin; Bertoni, Angelina; Mayer, Jochen; Thonar, Cécile; Frossard, Emmanuel; Schulin, Rainer; Tandy, Susan

    2017-12-01

    Zinc (Zn) deficiency in human populations depending on cereals as a main source of Zn is a global malnutrition problem. In this field study, we investigated the potential of green manure application to increase soil Zn availability and wheat grain Zn concentrations (biofortification) on a Luvisol with different long-term fertilizer management. We also studied cadmium (Cd), as wheat is a major contributor of this undesired non-essential element to human diets. Clover (Trifolium alexandrinum L.), mustard (Sinapis alba L.) or no green manure was grown on field plots which had been managed with farmyard manure or mineral fertilizers for 65years in Switzerland. After green manure incorporation into the soil, spring wheat (Triticum aestivum L.) was grown on all plots. The "diffusive gradients in thin films" (DGT) method and DTPA extraction were used to compare soil Zn and Cd availability among the treatments. In contrast to mustard, clover increased soil mineral nitrogen concentrations and wheat biomass; however, neither increased grain Zn concentrations. DGT-available Zn and Cd increased temporarily after both farmyard manure and mineral nitrogen fertilizer application. Higher DTPA-extractable soil Zn and Cd, lower wheat grain yields, but higher grain Zn concentrations were obtained with farmyard manure compared to mineral fertilizers, independent of the green manure treatment. Farmyard manure added Zn, Cd and organic matter that increased the soil binding capacity for Zn and Cd. The decomposition of clover residues caused higher wheat grain yields, but only marginally lower grain Zn concentrations. The absence of a stronger dilution of grain Zn was probably due to organic acid and nitrogen release from decomposing clover, which facilitated Zn uptake by wheat. The study revealed that both long- and short-term field management with organic matter alters soil Zn and Cd concentrations but that the long-term effects dominate their uptake by wheat, in Zn sufficient soil

  1. Microbial fuel cell assisted nitrate nitrogen removal using cow manure and soil.

    PubMed

    Vijay, Ankisha; Vaishnava, Monika; Chhabra, Meenu

    2016-04-01

    Microbial fuel cells (MFCs) are emerging wastewater treatment systems with a proven potential for denitrification. In this study, we have developed a high-rate denitrifying MFC. The anode consisted of cow manure and fruit waste and the cathode consisted of cow manure and soil. The initial chemical oxygen demand (COD)/nitrate nitrogen (NO3 (-)-N) was varied from 2 to 40 at the cathode while keeping the anode ratio fixed at 100. NO3 (-)-N removal rate of 7.1 ± 0.9 kg NO3 (-)-N/m(3) net cathodic compartment (NCC)/day was achieved at cathode COD/NO3 (-)-N ratio 7.31 with the current density of 190 ± 9.1 mA/m(2) and power density of 31.92 ± 4 mW/m(2) of electrode surface area. We achieved an open-circuit voltage (OCV) of 410 ± 20 mV at initial cathodic NO3 (-)-N of 0.345 g/l. The cathode COD/NO3 (-)-N ratio had a significant influence on MFC's OCV and nitrate removal rate. Lower OCV (<150 mV) and NO3 (-)-N removal rates were observed at COD/NO3 (-)-N ratio >12 and <7. Experiments done at different cathode pH values indicated that the optimum pH for denitrification was 7. Under optimized biochemical conditions, nitrate removal rate of 6.5 kg NO3 (-)-N/m(3) net cathodic compartment (NCC)/day and power density of 210 mW/m(2) were achieved in a low resistance MFC. The present study thus demonstrates the utility of MFCs for the treatment of high nitrate wastes.

  2. Leaching of Escherichia coli O157:H7 in Diverse Soils under Various Agricultural Management Practices

    PubMed Central

    Gagliardi, Joel V.; Karns, Jeffrey S.

    2000-01-01

    Application of animal manures to soil as crop fertilizers is an important means for recycling the nitrogen and phosphorus which the manures contain. Animal manures also contain bacteria, including many types of pathogens. Manure pathogen levels depend on the source animal, the animal's state of health, and how the manure was stored or treated before use. Rainfall may result in pathogen spread into soil by runoff from stored or unincorporated manure or by leaching through the soil profile. Steady rainfall consisting of 16.5 mm h−1 was applied to 100-mm disturbed soil cores that were treated with manure and inoculated with Escherichia coli O157:H7 strain B6914. The level of B6914 in leachate was near the inoculum level each hour for 8 h, as was the level of B6914 at several soil depths after 24 h, indicating that there was a high rate of growth. Bacterial movement through three different types of soil was then compared by using disturbed (tilled) and intact (no-till) soil cores and less intense rainfall consisting of 25.4 mm on 4 consecutive days and then four more times over a 17-day period. Total B6914 levels exceeded the inoculum levels for all treatments except intact clay loam cores. B6914 levels in daily leachate samples decreased sharply with time, although the levels were more constant when intact sandy loam cores were used. The presence of manure often increased total B6914 leachate and soil levels in intact cores but had the opposite effect on disturbed soil cores. Ammonia and nitrate levels correlated with B6914 and total coliform levels in leachate. We concluded that tillage practice, soil type, and method of pathogen delivery affect but do not prevent vertical E. coli O157:H7 and coliform transport in soil and that soluble nitrogen may enhance transport. PMID:10698745

  3. [Effects of crop rotation and bio-organic manure on soil microbial characteristics of Chrysanthemum cropping system].

    PubMed

    Xiao, Xin; Zhu, Wei; Du, Chao; Shi, Ya-dong; Wang, Jian-fei

    2015-06-01

    We conducted a field experiment to evaluate the effects of rotation system and bio-organic manure on soil microbial characteristics of Chrysanthemum cropping system. Taking Chrysanthemum morifolium Ramat and wheat as experimental plants, treatments under Chrysanthemum continuous cropping system (M1), conventional Chrysanthemum-wheat rotation system (M2), and Chrysanthemum-wheat rotation system receiving bio-organic manure application of 200 kg · 667 m(-2) (M3) were designed. Soil chemical properties, soil microbial biomass carbon (MBC) and nitrogen (MBN), and the amounts of different types of soil microorganisms were determined. Results showed that compared with M1, treatments of M2 and M3 significantly increased soil pH, organic matter, available N, P, and K, MBC, MBN, and the amounts of bacteria, fungi and actinomycetes, but decreased the ratio of MBC/MBN, and the relative percentage of fungi in the total amount of microorganisms. Treatment of M3 had the highest contents of soil organic matter, available N, available P, available K, MBC, MBN, and the amounts of bacteria, fungi and actinomycetes, with the values being 15.62 g · kg(-1), 64.75 mg · kg(-1), 83.26 mg · kg(-1), 96.72 mg · kg(-1), 217.40 mg · kg(-1), 38.41 mg · kg(-1), 22.31 x 10(6) cfu · g(-1), 56.36 x 10(3) cfu · g(-1), 15.90 x 10(5) cfu · g(-1), respectively. We concluded that rational crop rotation and bio-organic manure application could weaken soil acidification, improve soil fertility and microbial community structure, increase the efficiency of nutrition supply, and have a positive effect on reducing the obstacles of continuous cropping.

  4. Impact of Manure Fertilization on the Abundance of Antibiotic-Resistant Bacteria and Frequency of Detection of Antibiotic Resistance Genes in Soil and on Vegetables at Harvest

    PubMed Central

    Marti, Romain; Scott, Andrew; Tien, Yuan-Ching; Murray, Roger; Sabourin, Lyne; Zhang, Yun

    2013-01-01

    Consumption of vegetables represents a route of direct human exposure to bacteria found in soil. The present study evaluated the complement of bacteria resistant to various antibiotics on vegetables often eaten raw (tomato, cucumber, pepper, carrot, radish, lettuce) and how this might vary with growth in soil fertilized inorganically or with dairy or swine manure. Vegetables were sown into field plots immediately following fertilization and harvested when of marketable quality. Vegetable and soil samples were evaluated for viable antibiotic-resistant bacteria by plate count on Chromocult medium supplemented with antibiotics at clinical breakpoint concentrations. DNA was extracted from soil and vegetables and evaluated by PCR for the presence of 46 gene targets associated with plasmid incompatibility groups, integrons, or antibiotic resistance genes. Soil receiving manure was enriched in antibiotic-resistant bacteria and various antibiotic resistance determinants. There was no coherent corresponding increase in the abundance of antibiotic-resistant bacteria enumerated from any vegetable grown in manure-fertilized soil. Numerous antibiotic resistance determinants were detected in DNA extracted from vegetables grown in unmanured soil. A smaller number of determinants were additionally detected on vegetables grown only in manured and not in unmanured soil. Overall, consumption of raw vegetables represents a route of human exposure to antibiotic-resistant bacteria and resistance determinants naturally present in soil. However, the detection of some determinants on vegetables grown only in freshly manured soil reinforces the advisability of pretreating manure through composting or other stabilization processes or mandating offset times between manuring and harvesting vegetables for human consumption. PMID:23851089

  5. Impact of manure fertilization on the abundance of antibiotic-resistant bacteria and frequency of detection of antibiotic resistance genes in soil and on vegetables at harvest.

    PubMed

    Marti, Romain; Scott, Andrew; Tien, Yuan-Ching; Murray, Roger; Sabourin, Lyne; Zhang, Yun; Topp, Edward

    2013-09-01

    Consumption of vegetables represents a route of direct human exposure to bacteria found in soil. The present study evaluated the complement of bacteria resistant to various antibiotics on vegetables often eaten raw (tomato, cucumber, pepper, carrot, radish, lettuce) and how this might vary with growth in soil fertilized inorganically or with dairy or swine manure. Vegetables were sown into field plots immediately following fertilization and harvested when of marketable quality. Vegetable and soil samples were evaluated for viable antibiotic-resistant bacteria by plate count on Chromocult medium supplemented with antibiotics at clinical breakpoint concentrations. DNA was extracted from soil and vegetables and evaluated by PCR for the presence of 46 gene targets associated with plasmid incompatibility groups, integrons, or antibiotic resistance genes. Soil receiving manure was enriched in antibiotic-resistant bacteria and various antibiotic resistance determinants. There was no coherent corresponding increase in the abundance of antibiotic-resistant bacteria enumerated from any vegetable grown in manure-fertilized soil. Numerous antibiotic resistance determinants were detected in DNA extracted from vegetables grown in unmanured soil. A smaller number of determinants were additionally detected on vegetables grown only in manured and not in unmanured soil. Overall, consumption of raw vegetables represents a route of human exposure to antibiotic-resistant bacteria and resistance determinants naturally present in soil. However, the detection of some determinants on vegetables grown only in freshly manured soil reinforces the advisability of pretreating manure through composting or other stabilization processes or mandating offset times between manuring and harvesting vegetables for human consumption.

  6. Using rare earth elements to control phosphorus and track manure in runoff.

    PubMed

    Buda, Anthony R; Church, Clinton; Kleinman, Peter J A; Saporito, Lou S; Moyer, Barton G; Tao, Liang

    2010-01-01

    Concern over the enrichment of agricultural runoff with phosphorus (P) from land applied livestock manures has prompted the development of manure amendments that minimize P solubility. In this study, we amended poultry, dairy, and swine manures with two rare earth chlorides, lanthanum chloride (LaCl(3).7H(2)O) and ytterbium chloride (YbCl(3).6H(2)O), to evaluate their effects on P solubility in the manure following incubation in the laboratory as well as on the fate of P and rare earth elements (REEs) when manures were surface-applied to packed soil boxes and subjected to simulated rainfall. In terms of manure P solubility, La:water-extractable P (WEP) ratios close to 1:1 resulted in maximum WEP reduction of 95% in dairy manure and 98% in dry poultry litter. Results from the runoff study showed that REE applications to dry manures such as poultry litter were less effective in reducing dissolved reactive phosphorus (DRP) in runoff than in liquid manures and slurries, which was likely due to mixing limitations. The most effective reductions of DRP in runoff by REEs were observed in the alkaline pH soil, although reductions of DRP in runoff from the acidic soil were still >50%. Particulate REEs were strongly associated with particulate P in runoff, suggesting a potentially useful role in tracking the fate of P and other manure constituents from manure-amended soils. Finally, REEs that remained in soil following runoff had a tendency to precipitate WEP, especially in soils receiving manure amendments. The findings have valuable applications in water quality protection and the evaluation of P site assessment indices.

  7. Microbial ecology overview during anaerobic codigestion of dairy wastewater and cattle manure and use in agriculture of obtained bio-fertilisers.

    PubMed

    Toumi, Jihen; Miladi, Baligh; Farhat, Amel; Nouira, Said; Hamdi, Moktar; Gtari, Maher; Bouallagui, Hassib

    2015-12-01

    The anaerobic co-digestion of dairy wastewater (DW) and cattle manure (CM) was examined and associated with microbial community's structures using Denaturing Gradient Gel Electrophoresis (DGGE). The highest volatile solids (VS) reduction yield of 88.6% and biogas production of 0.87 L/g VS removed were obtained for the C/N ratio of 24.7 at hydraulic retention time (HRT) of 20 days. The bacterial DGGE profile showed significant abundance of Uncultured Bacteroidetes, Firmicutes and Synergistetes bacterium. The Syntrophomonas strains were discovered in dependent association to H2-using bacteria such as Methanospirillum sp., Methanosphaera sp. and Methanobacterium formicicum. These syntrophic associations are essential in anaerobic digesters allow them to keep low hydrogen partial pressure. However, high concentrations of VFA produced from dairy wastes acidification allow the growth of Methanosarcina species. The application of the stabilised anaerobic effluent on the agriculture soil showed significant beneficial effects on the forage corn and tomato plants growth and crops. Copyright © 2015 Elsevier Ltd. All rights reserved.

  8. Nitrogen loss from windblown agricultural soils in the Columbia Plateau

    USDA-ARS?s Scientific Manuscript database

    Wind erosion of agricultural soils can degrade both air quality and soil productivity in the Columbia Plateau of the Pacific Northwest United States. Soils in the region contain fine particles that, when suspended, are highly susceptible to long range transport in the atmosphere. Nitrogen (N) associ...

  9. Can biosolids reduce wind erosion of agricultural soils?

    USDA-ARS?s Scientific Manuscript database

    The application of biosolids to agricultural land has the potential to improve soil health and crop production. In addition, organic material contained in biosolids may enhance biological activity, retention of soil water, and soil aggregation. Thus, there is a likelihood that biosolids applied to s...

  10. Does North Appalachian Agriculture Contribute to Soil Carbon Sequestration

    USDA-ARS?s Scientific Manuscript database

    Agricultural systems are important for world ecosystems. They can be managed to moderate CO2 emissions. World soils can be both a sink and source of atmospheric CO2, but it is a slow process. Data from long-term soil management experiments are needed to assess soil carbon (C) sink capacity through a...

  11. Precision agriculture and soil and water management in cranberry production

    USDA-ARS?s Scientific Manuscript database

    Recent research on soil and water management of cranberry farms is presented in a special issue in Canadian Journal of Soil Science. The special issue (“Precision Agriculture and Soil Water Management in Cranberry Production”) consists of ten articles that include field, laboratory, and modeling stu...

  12. Short-term incorporation of organic manures and biofertilizers influences biochemical and microbial characteristics of soils under an annual crop [Turmeric (Curcuma longa L.)].

    PubMed

    Dinesh, R; Srinivasan, V; Hamza, S; Manjusha, A

    2010-06-01

    The study was conducted to determine whether short-term incorporation of organic manures and biofertilizers influence biochemical and microbial variables reflecting soil quality. For the study, soils were collected from a field experiment conducted on turmeric (Curcuma longa L.) involving organic nutrient management (ONM), chemical nutrient management (CNM) and integrated nutrient management (INM). The findings revealed that application of organic manures and biofertilizers (ONM and INM) positively influenced microbial biomass C, N mineralization, soil respiration and enzymes activities. Contrarily, greater metabolic quotient levels in CNM indicated a stressed soil microbial community. Principal component analysis indicated the strong relationship between microbial activity and the availability of labile and easily mineralizable organic matter. The findings imply that even short-term incorporation of organic manures and biofertilizers promoted soil microbial and enzyme activities and these parameters are sensitive enough to detect changes in soil quality due to short-term incorporation of biological fertilizers. (c) 2010 Elsevier Ltd. All rights reserved.

  13. Long-term effect of manure and fertilizer on soil organic carbon pools in dryland farming in northwest China.

    PubMed

    Liu, Enke; Yan, Changrong; Mei, Xurong; Zhang, Yanqing; Fan, Tinglu

    2013-01-01

    An understanding of the dynamics of soil organic carbon (SOC) as affected by farming practices is imperative for maintaining soil productivity and mitigating global warming. The objectives of this study were to investigate the effects of long-term fertilization on SOC and SOC fractions for the whole soil profile (0-100 cm) in northwest China. The study was initiated in 1979 in Gansu, China and included six treatments: unfertilized control (CK), nitrogen fertilizer (N), nitrogen and phosphorus (P) fertilizers (NP), straw plus N and P fertilizers (NP+S), farmyard manure (FYM), and farmyard manure plus N and P fertilizers (NP+FYM). Results showed that SOC concentration in the 0-20 cm soil layer increased with time except in the CK and N treatments. Long-term fertilization significantly influenced SOC concentrations and storage to 60 cm depth. Below 60 cm, SOC concentrations and storages were statistically not significant between all treatments. The concentration of SOC at different depths in 0-60 cm soil profile was higher under NP+FYM follow by under NP+S, compared to under CK. The SOC storage in 0-60 cm in NP+FYM, NP+S, FYM and NP treatments were increased by 41.3%, 32.9%, 28.1% and 17.9%, respectively, as compared to the CK treatment. Organic manure plus inorganic fertilizer application also increased labile soil organic carbon pools in 0-60 cm depth. The average concentration of particulate organic carbon (POC), dissolved organic carbon (DOC) and microbial biomass carbon (MBC) in organic manure plus inorganic fertilizer treatments (NP+S and NP+FYM) in 0-60 cm depth were increased by 64.9-91.9%, 42.5-56.9%, and 74.7-99.4%, respectively, over the CK treatment. The POC, MBC and DOC concentrations increased linearly with increasing SOC content. These results indicate that long-term additions of organic manure have the most beneficial effects in building carbon pools among the investigated types of fertilization.

  14. Long-Term Effect of Manure and Fertilizer on Soil Organic Carbon Pools in Dryland Farming in Northwest China

    PubMed Central

    Liu, Enke; Yan, Changrong; Mei, Xurong; Zhang, Yanqing; Fan, Tinglu

    2013-01-01

    An understanding of the dynamics of soil organic carbon (SOC) as affected by farming practices is imperative for maintaining soil productivity and mitigating global warming. The objectives of this study were to investigate the effects of long-term fertilization on SOC and SOC fractions for the whole soil profile (0–100 cm) in northwest China. The study was initiated in 1979 in Gansu, China and included six treatments: unfertilized control (CK), nitrogen fertilizer (N), nitrogen and phosphorus (P) fertilizers (NP), straw plus N and P fertilizers (NP+S), farmyard manure (FYM), and farmyard manure plus N and P fertilizers (NP+FYM). Results showed that SOC concentration in the 0–20 cm soil layer increased with time except in the CK and N treatments. Long-term fertilization significantly influenced SOC concentrations and storage to 60 cm depth. Below 60 cm, SOC concentrations and storages were statistically not significant between all treatments. The concentration of SOC at different depths in 0–60 cm soil profile was higher under NP+FYM follow by under NP+S, compared to under CK. The SOC storage in 0–60 cm in NP+FYM, NP+S, FYM and NP treatments were increased by 41.3%, 32.9%, 28.1% and 17.9%, respectively, as compared to the CK treatment. Organic manure plus inorganic fertilizer application also increased labile soil organic carbon pools in 0–60 cm depth. The average concentration of particulate organic carbon (POC), dissolved organic carbon (DOC) and microbial biomass carbon (MBC) in organic manure plus inorganic fertilizer treatments (NP+S and NP+FYM) in 0–60 cm depth were increased by 64.9–91.9%, 42.5–56.9%, and 74.7–99.4%, respectively, over the CK treatment. The POC, MBC and DOC concentrations increased linearly with increasing SOC content. These results indicate that long-term additions of organic manure have the most beneficial effects in building carbon pools among the investigated types of fertilization. PMID:23437161

  15. Evaluation of bottom ash and composted manure blends as a soil amendment material.

    PubMed

    Mukhtar, S; Kenimer, A L; Sadaka, S S; Mathis, J G

    2003-09-01

    The long-term goal of this project was to find alternative uses for bottom ash (BA) and composted dairy manure (CM), by-products of coal combustion and livestock production, respectively. The study discussed in this paper focused on potential water quality impacts associated with using blended BA and CM as a soil amendment. The constituents of BA and CM include heavy metals and other chemicals that, while essential nutrients for plant growth, also pose a potential threat to water quality. Four blends (BA:CM, v/v) namely, B1 (100%:0%), B2 (70%:30%), B3 (50%:50%) and B4 (0%:100%), were subjected to flow-through water table management and two blends, B2 (70%:30%) and B3 (50%:50%), were subjected to constant head water table management using de-ionized water. Leachate and standing water from saturated and flooded blends of BA and CM were examined for total solids (TS), volatile solids (VS), COD, pH, total Kjeldahl nitrogen (TKN), NO(3)-N, total P, total K as well as selected metals over a 5 and 7 week period for flow-through and constant head watertables, respectively. The results showed that higher CM content resulted in higher TS, VS, TKN, P and K concentrations in the leachate and standing water. Concentrations of these constituents were higher in leachate than in the standing water. Even though, marked reductions of most chemicals in the leachate and standing water were realized within one to three weeks, initially high concentrations of chemicals in leachate and standing water from these particular blends made them unsuitable as soil amendment material. Based upon these results, it was concluded that additional column studies of BA and CM blends with reduced CM content (5%, 10% and 20%) should be performed to further assess the feasibility of BA and CM blends as an environmentally safe soil amendment material.

  16. Determining soil quality in urban agricultural regions by soil enzyme-based index.

    PubMed

    Igalavithana, Avanthi Deshani; Farooq, Muhammad; Kim, Kye-Hoon; Lee, Young-Han; Qayyum, Muhammad Farooq; Al-Wabel, Mohammad I; Lee, Sang Soo; Ok, Yong Sik

    2017-06-26

    Urban agricultural soils are highly variable, and careful selection of sensitive indicators is needed for the assessment of soil quality. This study is proposed to develop an index based on soil enzyme activities for assessing the quality of urban agricultural soils. Top soils were collected from urban agricultural areas of Korea, and soil chemical properties, texture, microbial fatty acids, and enzyme activities were determined. The soils belonged to five textural classes with the highest frequency of sandy loam. There was no clear correlation between the soil chemical properties and soil microbial properties. Principal component analysis (PCA) and factor analysis were applied to microbial groups for identification of microbial community variation in soils. Two soil groups, namely group 1 (G1) and group 2 (G2), based on microbial community abundance were examined by PCA, and those were more prominent in factor analysis. The G1 soils showed higher microbial community abundance than G2 soils. The canonical discriminant analysis was applied to the enzyme activities of sandy loam soil to develop an index, and the index validation was confirmed using the unused soils and published data. The high-quality soils in published literature assigned the high valued index. Microbial fatty acids and soil enzyme activities can be suitable indicators for soil quality evaluation of urban agricultural soils.

  17. Decomposition of olive mill waste compost, goat manure and Medicago sativa in Lebanese soils using the litterbag technique

    NASA Astrophysics Data System (ADS)

    Atallah, Therese

    2014-05-01

    Organic amendments, green manure and plant residues incorporation are the main sources of nutrients in organic farming, their decomposition rate is crucial for the accumulation and long-term storage of organic matter in soils. In this study the decomposition of compost from olive mill waste (N: 29.3 g kg-1; total dissolved nitrogen or TDN: 3.82 g kg-1), goat manure (N: 31.5 g kg-1; TDN: 0.94 g kg-1), the shoots (N: 33.6 g kg-1; TDN: 17.57 g kg-1) and roots (N: 22.12 g kg-1; TDN: 8.87 g kg-1) of Medicago sativa was followed in three Lebanese soils. The nitrogen, phosphorus and potassium released were followed over one year, starting in early winter (December-January). The mild sub-humid Mediterranean conditions allowed a rapid mass loss in alfalfa shoots 30 days after incorporation. Manure and compost were more persistent. Between 80 and 90% of TDN were released, after 30 days of in-situ incubation for compost, the release was over 90% for alfalfa shoots. The movement of P was slower, as the compost (6.99 g kg-1 of P) and manure (9.81 g kg-1 of P) lost 33% and 22%, respectively, during 30 days of incubation. After one year, 15 to 35% of P remained in the soils. The manure was the richest in potassium (19.66 g kg-1) followed by the alfalfa shoots (15.56 g kg-1), the compost (8.19 g kg-1) and the roots (5.96 g kg-1). The loss of potassium was important, as over 88% had disappeared over the year. All decomposition curves followed an exponential model. The calculated coefficients of decomposition for total nitrogen (lnfinal - lninitial/days) were significantly higher for alfalfa shoots (0.00547 day-1) and similar for the compost (0.00184 day-1) and the manure (0.00175 day-1). The ANOVA test showed a difference between two of the sites (Site A: 521 g kg-1 of clay and 42 g kg-1 of calcium carbonate; Site S: 260 g kg-1 of clay and 269 g kg-1 of CaCO3) and the third one (Site L: 315 g kg-1 of clay and 591 g kg-1 of CaCO3). The relationships between the soil calcium

  18. Comparison of models used for national agricultural ammonia emission inventories in Europe: Litter-based manure systems

    NASA Astrophysics Data System (ADS)

    Reidy, B.; Webb, J.; Misselbrook, T. H.; Menzi, H.; Luesink, H. H.; Hutchings, N. J.; Eurich-Menden, B.; Döhler, H.; Dämmgen, U.

    Six N-flow models, used to calculate national ammonia (NH 3) emissions from agriculture in different European countries, were compared using standard data sets. Scenarios for litter-based systems were run separately for beef cattle and for broilers, with three different levels of model standardisation: (a) standardized inputs to all models (FF scenario); (b) standard N excretion, but national values for emission factors (EFs) (FN scenario); (c) national values for N excretion and EFs (NN scenario). Results of the FF scenario for beef cattle produced very similar estimates of total losses of total ammoniacal-N (TAN) (±6% of the mean total), but large differences in NH 3 emissions (±24% of the mean). These differences arose from the different approaches to TAN immobilization in litter, other N losses and mineralization in the models. As a result of those differences estimates of TAN available at spreading differed by a factor of almost 3. Results of the FF scenario for broilers produced a range of estimates of total changes in TAN (±9% of the mean total), and larger differences in the estimate of NH 3 emissions (±17% of the mean). The different approaches among the models to TAN immobilization, other N losses and mineralization, produced estimates of TAN available at spreading which differed by a factor of almost 1.7. The differences in estimates of NH 3 emissions decreased as estimates of immobilization and other N losses increased. Since immobilization and denitrification depend also on the C:N ratio in manure, there would be advantages to include C flows in mass-flow models. This would also provide an integrated model for the estimation of emissions of methane, non-methane VOCs and carbon dioxide. Estimation of these would also enable an estimate of mass loss, calculation of the N and TAN concentrations in litter-based manures and further validation of model outputs.

  19. Animal waste utilization: Effective use of manure as a soil resource

    SciTech Connect

    Hatfield, J.L.; Stewart, B.A.

    1998-12-31

    This unique book examines the beneficial aspects of animal waste as a soil resource--not simply as an agricultural by-product with minimal practical use. Topics include: types of livestock waste--swine, poultry, dairy; methods and management of waste utilization; storage, handling, processing and application of animal waste; economics of waste utilization; new modeling and management techniques; and nonpoint source pollution, water quality, leaching, and air quality.

  20. Influence of solid dairy manure and compost with and without alum on survival of indicator bacteria in soil and on potato.

    PubMed

    Entry, James A; Leytem, April B; Verwey, Sheryl

    2005-11-01

    We measured Escherichia coli, Enterococcus spp. and fecal coliform numbers in soil and on fresh potato skins after addition of solid dairy manure and dairy compost with and without alum (Al(2)(SO(4))(3)) treatment 1, 7, 14, 28, 179 and 297 days after application. The addition of dairy compost or solid dairy manure at rates to meet crop phosphorus uptake did not consistently increase E. coli and Enterococcus spp. and fecal coliform bacteria in the soil. We did not detect E. coli in any soil sample after the first sampling day. Seven, 14, 28, 179 and 297 days after solid dairy waste and compost and alum were applied to soil, alum did not consistently affect Enterococcus spp. and fecal coliform bacteria in the soil. We did not detect E. coli in any soil, fresh potato skin or potato wash-water at 214 days after dairy manure or compost application regardless of alum treatment. Dairy compost or solid dairy manure application to soil at rates to meet crop phosphorus uptake did not consistently increase Enterococcus spp. and fecal coliform numbers in bulk soil. Solid dairy manure application to soil at rates to meet crop phosphorus uptake, increased Enterococcus spp. and fecal coliform numbers in potato rhizosphere soil. However, fresh potato skins had higher Enterococcus spp. and fecal coliform numbers when solid dairy manure was added to soil compared to compost, N and P inorganic fertilizer and N fertilizer treatments. We did not find any E. coli, Enterococcus or total coliform bacteria on the exterior of the tuber, within the peel or within a whole baked potato after microwave cooking for 5 min.

  1. Calculating Nitrogen Gas Fluxes from Agricultural Soils in the Central US

    NASA Astrophysics Data System (ADS)

    Del Grosso, S.; Ogle, S. M.; Parton, W. J.; Breidt, F. J.

    2009-12-01

    The DAYCENT model is currently used to estimate N2O emissions from agricultural soils for the US National GHG Inventory. DAYCENT is a process based terrestrial ecosystem model of intermediate complexity. The model has been extensively tested with field data from various locations representing a wide range of vegetation types, soil classifications, and land management practices. DAYCENT simulates direct soil N2O emissions, as well as indirect NO emissions from NO3 leaching and N volatilization, at sub-county level resolution. Meteorological data required to drive DAYCENT were acquired from DAYMET and soils data were obtained from STATSGO. A Monte Carlo analysis was combined with an empirically-based approach to quantify uncertainties. The Monte Carlo analysis involved drawing model drivers from probability distribution functions for major model inputs (i.e. weather, soil class, N addition rate). A structural uncertainty estimator was developed by deriving a statistical equation from a comparison of DAYCENT simulated N2O emissions with measured emissions from experiments in North America. Spatial variability in emissions was driven primarily by differences in N inputs from fertilizer and manure, while temporal variability was driven more by weather. A higher portion of total uncertainty was due to model structure compared to model inputs suggesting that improvements in model algorithms and parameterization are needed to increase confidence in emission estimates

  2. Determining effects of multiple tannin manure applications on dairy forages and soil

    USDA-ARS?s Scientific Manuscript database

    Dietary choices for dairy cows have direct implications to nutrient availability from land-applied manure because of alterations to manure chemistry. Tannin additions to a dairy cow’s diet protect feed protein through rumen fermentation and digestion, resulting in reduced concentrations of urea nitr...

  3. Evaluation of ammonia emissions from manure incorporated with different soil aerator configurations

    USDA-ARS?s Scientific Manuscript database

    The incorporation of swine manure with tillage effectively reduces ammonia emissions and conserves crop available N but is not compatible with no-till and many other conservation tillage programs. Rolling-tine aerators potentially provide a means to enhance manure infiltration with limited disruptio...

  4. Agriculture Canada Central Saskatchewan Vector Soils Data

    NASA Technical Reports Server (NTRS)

    Knapp, David; Hall, Forrest G. (Editor); Rostad, Harold

    2000-01-01

    This data set consists of GIS layers that describe the soils of the BOREAS SSA. These original data layers were submitted as vector data in ARC/INFO EXPORT format. These data also include the soil name and soil layer files, which provide additional information about the soils. There are three sets of attributes that include information on the primary, secondary, and tertiary soil type within each polygon. Thus, there is a total of nine main attributes in this data set.

  5. No-tillage and manure effects on soil erosion, carbon and nitrogen dynamics in sugarcane field in Okinawa, Japan

    USDA-ARS?s Scientific Manuscript database

    Soil erosion and nutrients runoff have led to agricultural and environmental problems throughout the world. Not only on-site effect of decreasing soil fertility, but also various ecosystems have been damaged due to oversupply of sediment and nutrients from agricultural zones. Therefore effective soi...

  6. Application of PTR-MS for measuring odorant emissions from soil application of manure slurry.

    PubMed

    Feilberg, Anders; Bildsoe, Pernille; Nyord, Tavs

    2015-01-09

    Odorous volatile organic compounds (VOC) and hydrogen sulfide (H2S) are emitted together with ammonia (NH3) from manure slurry applied as a fertilizer, but little is known about the composition and temporal variation of the emissions. In this work, a laboratory method based on dynamic flux chambers packed with soil has been used to measure emissions from untreated pig slurry and slurry treated by solid-liquid separation and ozonation. Proton-transfer-reaction mass spectrometry (PTR-MS) was used to provide time resolved data for a range of VOC, NH3 and H2S. VOC included organic sulfur compounds, carboxylic acids, phenols, indoles, alcohols, ketones and aldehydes. H2S emission was remarkably observed to take place only in the initial minutes after slurry application, which is explained by its high partitioning into the air phase. Long-term odor effects are therefore assessed to be mainly due to other volatile compounds with low odor threshold values, such as 4-methylphenol. PTR-MS signal assignment was verified by comparison to a photo-acoustic analyzer (NH3) and to thermal desorption GC/MS (VOC). Due to initial rapid changes in odorant emissions and low concentrations of odorants, PTR-MS is assessed to be a very useful method for assessing odor following field application of slurry. The effects of treatments on odorant emissions are discussed.

  7. Application of PTR-MS for Measuring Odorant Emissions from Soil Application of Manure Slurry

    PubMed Central

    Feilberg, Anders; Bildsoe, Pernille; Nyord, Tavs

    2015-01-01

    Odorous volatile organic compounds (VOC) and hydrogen sulfide (H2S) are emitted together with ammonia (NH3) from manure slurry applied as a fertilizer, but little is known about the composition and temporal variation of the emissions. In this work, a laboratory method based on dynamic flux chambers packed with soil has been used to measure emissions from untreated pig slurry and slurry treated by solid-liquid separation and ozonation. Proton-transfer-reaction mass spectrometry (PTR-MS) was used to provide time resolved data for a range of VOC, NH3 and H2S. VOC included organic sulfur compounds, carboxylic acids, phenols, indoles, alcohols, ketones and aldehydes. H2S emission was remarkably observed to take place only in the initial minutes after slurry application, which is explained by its high partitioning into the air phase. Long-term odor effects are therefore assessed to be mainly due to other volatile compounds with low odor threshold values, such as 4-methylphenol. PTR-MS signal assignment was verified by comparison to a photo-acoustic analyzer (NH3) and to thermal desorption GC/MS (VOC). Due to initial rapid changes in odorant emissions and low concentrations of odorants, PTR-MS is assessed to be a very useful method for assessing odor following field application of slurry. The effects of treatments on odorant emissions are discussed. PMID:25585103

  8. Assessment of uncertainty and risk in modeling regional heavy-metal accumulation in agricultural soils.

    PubMed

    Keller, A; Abbaspour, K C; Schulin, R

    2002-01-01

    Present agricultural land use and atmospheric deposition may lead to heavy-metal accumulation rates in soils that may violate soil quality standards in the future. To undertake suitable preventive measures against heavy-metal enrichment, flux balances in agroecosystems and their uncertainties have to be assessed. For this reason we developed an empirical stochastic model, PROTERRA-S, that considers heavy-metal inputs through agricultural management as well as outputs by crop removal and leaching on a regional scale. In this manuscript we describe application of PROTERRA-S to the Sundgau region in Switzerland. Considering uncertainty in informational and natural variability, large variations of the aggregated regional cadmium and zinc balances were found, with standard deviations that were of the same order of magnitude as their average values. Uncertainty in the simulated net zinc flux originated mainly from uncertainty in the zinc concentrations of manure and crops and from uncertainty in atmospheric deposition of zinc. For cadmium, the main contribution to the total uncertainty came from uncertainty in crop concentration, regression functions to estimate Freundlich parameters, atmospheric deposition, and from spatial variation of soil pH and cation exchange capacity (CEC). For both zinc and cadmium, informational uncertainty in input data were large, indicating that significant uncertainty reduction could be achieved by additional data collection campaigns. A monetary risk value for the regional zinc accumulation rate in Sundgau was calculated to be on the order of 22 million Euro.

  9. Relative contribution of maize and external manure amendment to soil carbon sequestration in a long-term intensive maize cropping system

    PubMed Central

    Zhang, Wenju; Liu, Kailou; Wang, Jinzhou; Shao, Xingfang; Xu, Minggang; Li, Jianwei; Wang, Xiujun; Murphy, Daniel V.

    2015-01-01

    We aimed to quantify the relative contributions of plant residue and organic manure to soil carbon sequestration. Using a 27-year-long inorganic fertilizer and manure amendment experiment in a maize (Zea mays L.) double-cropping system, we quantified changes in harvestable maize biomass and soil organic carbon stocks (0–20 cm depth) between 1986-2012. By employing natural 13C tracing techniques, we derived the proportional contributions of below-ground crop biomass return (maize-derived carbon) and external manure amendment (manure-derived carbon) to the total soil organic carbon stock. The average retention of maize-derived carbon plus manure-derived carbon during the early period of the trial (up to 11 years) was relatively high (10%) compared to the later period (22 to 27 years, 5.1–6.3%). About 11% of maize-derived carbon was converted to soil organic carbon, which was double the retention of manure-derived carbon (4.4–5.1%). This result emphasized that organic amendments were necessary to a win-win strategy for both SOC sequestration and maize production. PMID:26039186

  10. Global warming potential of manure amended soils under rice-wheat system in the Indo-Gangetic plains

    NASA Astrophysics Data System (ADS)

    Bhatia, A.; Pathak, H.; Jain, N.; Singh, P. K.; Singh, A. K.

    Use of organic amendments such as farmyard manure (FYM), green manure (GM) and crop residues is important to improve soil health and reduce the dependence on synthetic chemical fertilizer. However, these organic amendments also effect the emissions of greenhouse gas (GHG) from soil. Influence of different organic amendments on emissions of GHG from soil and their global warming potential (GWP) was studied in a field experiment in rice-wheat cropping system of Indo-Gangetic plains (IGP). There was 28% increase in CH 4 emissions on addition of 25% N through Sesbania GM along with urea compared to urea alone. Substitution of 100% inorganic N by organic sources lead to a 60% increase in CH 4 emissions. The carbon equivalent emission from rice-wheat systems varied between 3816 and 4886 kg C equivalent ha -1 depending upon fertilizer and organic amendment. GWP of rice-wheat system increased by 28% on full substitution of organic N by chemical N. However, the C efficiency ratios of the GM and crop residue treatments were at par with the recommended inorganic fertilizer treatment. Thus use of organic amendments along with inorganic fertilizer increases the GWP of the rice-wheat system but may improve the soil fertility status without adversely affecting the C efficiency ratio. However, the trade-off between improved yield and soil health versus GHG emissions should be taken into account while promoting the practice of farming with organic residues substitution for mineral fertilizer.

  11. Environmental analysis of typical antibiotic-resistant bacteria and ARGs in farmland soil chronically fertilized with chicken manure.

    PubMed

    Zhao, Xiang; Wang, Jinhua; Zhu, Lusheng; Ge, Weili; Wang, Jun

    2017-03-21

    Antibiotics and the corresponding resistant bacteria and resistance genes (ARGs) are generally considered emerging pollutants. To assess the impacts of tetracycline (TC) and sulfonamide (SA) antibiotics that are eliminated with fecaluria as drug prototypes, farmland soil used to research long-term fertilization with chicken manure was collected at four sites in Shandong Province. In this study, the rates of bacterial drug resistance to the same antibiotic decreased with an increase in the concentration of that antibiotic, and the resistance rates to TCs were lower than those to SAs. PCR of ARGs revealed that the ARGs detected at the highest frequency were the TC resistance genes tetW and tetO and the SA resistance genes sul1 and sul2. Real-time qPCR showed that the quantities of ARGs in farmland soil fertilized with chicken manure were significantly greater compared with the control soil. Moreover, significant correlations (R(2)=0.9525, p<0.05) between the number of sul ARGs and the total SA concentration were observed in all of the soil samples. In summary, this study showed that SAs can induce the appearance of ARGs and pollute the soil environment.

  12. Replacing methyl bromide in annual strawberry production with glucosinolate-containing green manure crops.

    PubMed

    Lazzeri, Luca; Baruzzi, Gianluca; Malaguti, Lorena; Antoniacci, Loredana

    2003-09-01

    The use of biocidal green manure crops is an agronomic technique for amending soil with fresh organic matter containing volatile compounds active in controlling some soil-borne pests and diseases. Two new selections of the Brassicaceae family were cultivated, incorporated before planting strawberries and tested as an alternative to fumigation with methyl bromide. Two biocidal green manure crops (Brassica juncea L sel ISCI20, Eruca sativa Mill cv Nemat) containing glucosinolate-myrosinase systems, a conventional green manure (barley), untreated soil and a fumigated control were evaluated during two seasons. The effect of these soil management systems on subsequent strawberry performance was evaluated by monitoring yield and plant growth parameters. In both years, biocidal plant green manure treatments led to a fruit yield lower than with methyl bromide, but higher than with conventional green manure or untreated soil. These results confirm the good prospects for biocidal green manures, not only as an environmentally friendly alternative to methyl bromide in conventional agriculture, but also in organic agricult