Sample records for mapping tools gmt

  1. A modern Python interface for the Generic Mapping Tools

    NASA Astrophysics Data System (ADS)

    Uieda, L.; Wessel, P.

    2017-12-01

    Figures generated by The Generic Mapping Tools (GMT) are present in countless publications across the Earth sciences. The command-line interface of GMT lends the tool its flexibility but also creates a barrier to entry for begginers. Meanwhile, adoption of the Python programming language has grown across the scientific community. This growth is largely due to the simplicity and low barrier to entry of the language and its ecosystem of tools. Thus, it is not surprising that there have been at least three attempts to create Python interfaces for GMT: gmtpy (github.com/emolch/gmtpy), pygmt (github.com/ian-r-rose/pygmt), and PyGMT (github.com/glimmer-cism/PyGMT). None of these projects are currently active and, with the exception of pygmt, they do not use the GMT Application Programming Interface (API) introduced in GMT 5. The two main Python libraries for plotting data on maps are the matplotlib Basemap toolkit (matplotlib.org/basemap) and Cartopy (scitools.org.uk/cartopy), both of which rely on matplotlib (matplotlib.org) as the backend for generating the figures. Basemap is known to have limitations and is being discontinued. Cartopy is an improvement over Basemap but is still bound by the speed and memory constraints of matplotlib. We present a new Python interface for GMT (GMT/Python) that makes use of the GMT API and of new features being developed for the upcoming GMT 6 release. The GMT/Python library is designed according to the norms and styles of the Python community. The library integrates with the scientific Python ecosystem by using the "virtual files" from the GMT API to implement input and output of Python data types (numpy "ndarray" for tabular data and xarray "Dataset" for grids). Other features include an object-oriented interface for creating figures, the ability to display figures in the Jupyter notebook, and descriptive aliases for GMT arguments (e.g., "region" instead of "R" and "projection" instead of "J"). GMT/Python can also serve as a backend for developing new high-level interfaces, which can help make GMT more accessible to beginners and more intuitive for Python users. GMT/Python is an open-source project hosted on Github (github.com/GenericMappingTools/gmt-python) and is in early stages of development. A first release will accompany the release of GMT 6, which is expected for early 2018.

  2. Using the Generic Mapping Tools From Within the MATLAB, Octave and Julia Computing Environments

    NASA Astrophysics Data System (ADS)

    Luis, J. M. F.; Wessel, P.

    2016-12-01

    The Generic Mapping Tools (GMT) is a widely used software infrastructure tool set for analyzing and displaying geoscience data. Its power to analyze and process data and produce publication-quality graphics has made it one of several standard processing toolsets used by a large segment of the Earth and Ocean Sciences. GMT's strengths lie in superior publication-quality vector graphics, geodetic-quality map projections, robust data processing algorithms scalable to enormous data sets, and ability to run under all common operating systems. The GMT tool chest offers over 120 modules sharing a common set of command options, file structures, and documentation. GMT modules are command line tools that accept input and write output, and this design allows users to write scripts in which one module's output becomes another module's input, creating highly customized GMT workflows. With the release of GMT 5, these modules are high-level functions with a C API, potentially allowing users access to high-level GMT capabilities from any programmable environment. Many scientists who use GMT also use other computational tools, such as MATLAB® and its clone Octave. We have built a MATLAB/Octave interface on top of the GMT 5 C API. Thus, MATLAB or Octave now has full access to all GMT modules as well as fundamental input/output of GMT data objects via a MEX function. Internally, the GMT/MATLAB C API defines six high-level composite data objects that handle input and output of data via individual GMT modules. These are data tables, grids, text tables (text/data mixed records), color palette tables, raster images (1-4 color bands), and PostScript. The API is responsible for translating between the six GMT objects and the corresponding native MATLAB objects. References to data arrays are passed if transposing of matrices is not required. The GMT and MATLAB/Octave combination is extremely flexible, letting the user harvest the general numerical and graphical capabilities of both systems, and represents a giant step forward in interoperability between GMT and other software package. We will present examples of the symbiotic benefits of combining these platforms. Two other extensions are also in the works: a nearly finished Julia wrapper and an embryonic Python module. Publication supported by FCT- project UID/GEO/50019/2013 - Instituto D. Luiz

  3. Hawaiian Volcano Observatory seismic data, January to March 2009

    USGS Publications Warehouse

    Nakata, Jennifer S.; Okubo, Paul G.

    2010-01-01

    Figures 11–14 are maps showing computer-located hypocenters. The maps were generated using the Generic Mapping Tools (GMT), found at http://gmt.soest.hawaii.edu/ (last accessed 01/22/2010), in place of traditional QPLOT maps.

  4. The GMT/MATLAB Toolbox

    NASA Astrophysics Data System (ADS)

    Wessel, Paul; Luis, Joaquim F.

    2017-02-01

    The GMT/MATLAB toolbox is a basic interface between MATLAB® (or Octave) and GMT, the Generic Mapping Tools, which allows MATLAB users full access to all GMT modules. Data may be passed between the two programs using intermediate MATLAB structures that organize the metadata needed; these are produced when GMT modules are run. In addition, standard MATLAB matrix data can be used directly as input to GMT modules. The toolbox improves interoperability between two widely used tools in the geosciences and extends the capability of both tools: GMT gains access to the powerful computational capabilities of MATLAB while the latter gains the ability to access specialized gridding algorithms and can produce publication-quality PostScript-based illustrations. The toolbox is available on all platforms and may be downloaded from the GMT website.

  5. The Generic Mapping Tools 6: Classic versus Modern Mode

    NASA Astrophysics Data System (ADS)

    Wessel, P.; Uieda, L.; Luis, J. M. F.; Scharroo, R.; Smith, W. H. F.; Wobbe, F.

    2017-12-01

    The Generic Mapping Tools (GMT; gmt.soest.hawaii.edu) is a 25-year old, mature open-source software package for the analysis and display of geoscience data (e.g., interpolate, filter, manipulate, project and plot temporal and spatial data). The GMT "toolbox" includes about 80 core and 40 supplemental modules sharing a common set of command options, file structures, and documentation. GMT5, when released in 2013, introduced an application programming interface (API) to allow programmatic access to GMT from other computing environments. Since then, we have released a GMT/MATLAB toolbox, an experimental GMT/Julia package, and will soon introduce a GMT/Python module. In developing these extensions, we wanted to simplify the GMT learning curve but quickly realized the main stumbling blocks to GMT command-line mastery would be ported to the external environments unless we introduced major changes. With thousands of GMT scripts already in use by scientists around the world, we were acutely aware of the need for backwards compatibility. Our solution, to be released as GMT 6, was to add a modern run mode that complements the classic mode offered so far. Modern mode completely eliminates the top three obstacles for new (and not so new) GMT users: (1) The responsibility to properly stack PostScript layers manually (i.e., the -O -K dance), (2) the responsibility of handling output redirection of PostScript (create versus append), and (3) the need to provide commands with repeated information about regions (-R) and projections (-J). Thus, modern mode results in shorter, simpler scripts with fewer pitfalls, without interfering with classic scripts. Our implementation adds five new commands that begin and end a modern session, simplify figure management, automate the conversion of PostScript to more suitable formats, automate region detection, and offer a new automated subplot environment for multi-panel illustrations. Here, we highlight the GMT modern mode and the simplifications it offers, both for command-line use and in external environments. GMT 6 is in beta mode but accessible from our repository. Numerous improvements have been added in addition to modern mode; we expect a formal release in early 2018. Publication partially supported by FCT project UID/GEO/50019/2013 - Instituto D. Luiz.

  6. Globes from global data: Charting international research networks with the GRASS GIS r.out.polycones add-on module.

    NASA Astrophysics Data System (ADS)

    Löwe, Peter

    2015-04-01

    Many Free and Open Source Software (FOSS) tools have been created for the various application fields within geoscience. While FOSS allows re-implementation of functionalities in new environments by access to the original codebase, the easiest approach to build new software solutions for new problems is the combination or merging of existing software tools. Such mash-ups are implemented by embedding and encapsulating FOSS tools within each another, effectively focusing the use of the embedded software to the specific role it needs to perform in the given scenario, while ignoring all its other capabilities. GRASS GIS is a powerful and established FOSS GIS for raster, vector and volume data processing while the Generic Mapping Tools (GMT) are a suite of powerful Open Source mapping tools, which exceed the mapping capabilities of GRASS GIS. This poster reports on the new GRASS GIS add-on module r.out.polycones. It enables users to utilize non-continuous projections for map production within the GRASS production environment. This is implemented on the software level by encapsulating a subset of GMT mapping capabilities into a GRASS GIS (Version 6.x) add-on module. The module was developed at the German National Library of Science and Technology (TIB) to provide custom global maps of scientific collaboration networks, such as the DataCite consortium, the registration agency for Digital Object Identifiers (DOI) for research data. The GRASS GIS add-on module can be used for global mapping of raster data into a variety of non continuous sinosoidal projections, allowing the creation of printable biangles (gores) to be used for globe making. Due to the well structured modular nature of GRASS modules, technical follow-up work will focus on API-level Python-based integration in GRASS 7 [1]. Based on this, GMT based mapping capabilities in GRASS will be extended beyond non-continuous sinosoidal maps and advanced from raster-layers to content GRASS display monitors. References: [1] Petras, V., Petrasova, A., Chemin, Y., Zambelli, P., Landa, M., Gebbert, S., Neteler, N., Löwe, P.: Analyzing rasters, vectors and time series using new Python interfaces in GRASS GIS 7, Geophysical Research Abstracts Vol. 17, EGU2015-8142, 2015 (in preparation)

  7. Free software helps map and display data

    NASA Astrophysics Data System (ADS)

    Wessel, Paul; Smith, Walter H. F.

    When creating camera-ready figures, most scientists are familiar with the sequence of raw data → processing → final illustration and with the spending of large sums of money to finalize papers for submission to scientific journals, prepare proposals, and create overheads and slides for various presentations. This process can be tedious and is often done manually, since available commercial or in-house software usually can do only part of the job.To expedite this process, we introduce the Generic Mapping Tools (GMT), which is a free, public domain software package that can be used to manipulate columns of tabular data, time series, and gridded data sets and to display these data in a variety of forms ranging from simple x-y plots to maps and color, perspective, and shaded-relief illustrations. GMT uses the PostScript page description language, which can create arbitrarily complex images in gray tones or 24-bit true color by superimposing multiple plot files. Line drawings, bitmapped images, and text can be easily combined in one illustration. PostScript plot files are device-independent, meaning the same file can be printed at 300 dots per inch (dpi) on an ordinary laserwriter or at 2470 dpi on a phototypesetter when ultimate quality is needed. GMT software is written as a set of UNIX tools and is totally self contained and fully documented. The system is offered free of charge to federal agencies and nonprofit educational organizations worldwide and is distributed over the computer network Internet.

  8. Systems engineering implementation in the preliminary design phase of the Giant Magellan Telescope

    NASA Astrophysics Data System (ADS)

    Maiten, J.; Johns, M.; Trancho, G.; Sawyer, D.; Mady, P.

    2012-09-01

    Like many telescope projects today, the 24.5-meter Giant Magellan Telescope (GMT) is truly a complex system. The primary and secondary mirrors of the GMT are segmented and actuated to support two operating modes: natural seeing and adaptive optics. GMT is a general-purpose telescope supporting multiple science instruments operated in those modes. GMT is a large, diverse collaboration and development includes geographically distributed teams. The need to implement good systems engineering processes for managing the development of systems like GMT becomes imperative. The management of the requirements flow down from the science requirements to the component level requirements is an inherently difficult task in itself. The interfaces must also be negotiated so that the interactions between subsystems and assemblies are well defined and controlled. This paper will provide an overview of the systems engineering processes and tools implemented for the GMT project during the preliminary design phase. This will include requirements management, documentation and configuration control, interface development and technical risk management. Because of the complexity of the GMT system and the distributed team, using web-accessible tools for collaboration is vital. To accomplish this GMTO has selected three tools: Cognition Cockpit, Xerox Docushare, and Solidworks Enterprise Product Data Management (EPDM). Key to this is the use of Cockpit for managing and documenting the product tree, architecture, error budget, requirements, interfaces, and risks. Additionally, drawing management is accomplished using an EPDM vault. Docushare, a documentation and configuration management tool is used to manage workflow of documents and drawings for the GMT project. These tools electronically facilitate collaboration in real time, enabling the GMT team to track, trace and report on key project metrics and design parameters.

  9. Geometric Comparisons of Selected Small Topographically Fresh Volcanoes in the Borealis and Elysium Planitia Volcanic Fields, Mars: Implications for Eruptive Styles

    NASA Technical Reports Server (NTRS)

    Taylor, K.; Sakimoto, S. E. H.; Mitchell, D.

    2002-01-01

    MOLA (Mars Orbiter Laser Altimeter) data from small, topographically fresh volcanoes from the Elysium and Borealis regions were gridded and analyzed using GMT (Generic Mapping Tools) programs. Results compare eruptive styles of the two regions, and draw conclusions about the different volcanic regions. Additional information is contained in the original extended abstract.

  10. ADOPT: A tool for automatic detection of tectonic plates at the surface of convection models

    NASA Astrophysics Data System (ADS)

    Mallard, C.; Jacquet, B.; Coltice, N.

    2017-08-01

    Mantle convection models with plate-like behavior produce surface structures comparable to Earth's plate boundaries. However, analyzing those structures is a difficult task, since convection models produce, as on Earth, diffuse deformation and elusive plate boundaries. Therefore we present here and share a quantitative tool to identify plate boundaries and produce plate polygon layouts from results of numerical models of convection: Automatic Detection Of Plate Tectonics (ADOPT). This digital tool operates within the free open-source visualization software Paraview. It is based on image segmentation techniques to detect objects. The fundamental algorithm used in ADOPT is the watershed transform. We transform the output of convection models into a topographic map, the crest lines being the regions of deformation (plate boundaries) and the catchment basins being the plate interiors. We propose two generic protocols (the field and the distance methods) that we test against an independent visual detection of plate polygons. We show that ADOPT is effective to identify the smaller plates and to close plate polygons in areas where boundaries are diffuse or elusive. ADOPT allows the export of plate polygons in the standard OGR-GMT format for visualization, modification, and analysis under generic softwares like GMT or GPlates.

  11. Comparison of Southern Hemisphere radiosonde and LIMS temperatures at 100 mb. [limb infrared monitor of stratosphere

    NASA Technical Reports Server (NTRS)

    Miles, T.; Grose, W. L.; Russell, J. M., III; Remsberg, E. E.

    1987-01-01

    Radiosonde (RS)and satellite-derived (Nimbus-7 LIMS) 100-mb temperatures over New Zealand at 12 GMT are compared for the 1978-79 summer. The colocated LIMS temperature information consists of synoptically mapped values (for 12 GMT), as well as the primary nighttime orbital retrievals valid at about 1030 GMT. The RS time series of temperature is dominated by temporal fluctuations associated mainly with the eastward passage of waves which have characteristic periods of 4-5 and 11-12 days and peak-to-peak amplitudes of 10-15 K. The LIMS temperatures and the corresponding temperature time series are also found to exhibit quite close agreement (in terms of temporal phase for the latter) with the RS data. However, the LIMS-mapped temperature fluctuations suffer from a noticeable attenuation in amplitude (approaching 50 percent for higher-frequency fluctuations), which will affect the accuracy of LIMS-derived estimates of dynamical quantities such as wind velocity and relative vorticity in the lower stratosphere.

  12. Transfer effects of errorless Goal Management Training on cognitive function and quality of life in brain-injured persons.

    PubMed

    Bertens, Dirk; Kessels, Roy P C; Boelen, Danielle H E; Fasotti, Luciano

    2016-01-01

    Previous findings had shown that the addition of errorless learning to traditional Goal Management Training (GMT) resulted in superior results when training everyday tasks in persons with executive deficits after brain injury. To investigate the additional effects of an errorless GMT on cognitive function and quality of life after acquired brain injury. This is a supplementary analysis of findings from an RCT in which 67 patients with executive impairments after acquired brain injury were randomly allocated to an experimental errorless GMT (n = 33) or conventional GMT (n = 34) to train two individually chosen everyday tasks. Objective cognitive function using neuropsychological tests, subjective cognitive complaints and quality of life using questionnaires were assessed before and after training. No significant interaction effects between these three types of outcome measures and the two forms of GMT were found. Irrespective of treatment, performance on two executive tests (Modified Six Elements Test; p = 0.006, Zoo Map test; p = 0.001) improved and daily executive function problems as reported by the participants (EFI; p = 0.001) and proxies (DEX; p = 0.01) diminished. Besides the previously found superiority of errorless GMT when training everyday tasks, additional improvements in cognition and quality of life did not differ between the two treatments.

  13. Abbreviated Goal Management Training Shows Preliminary Evidence as a Neurorehabilitation Tool for HIV-associated Neurocognitive Disorders among Substance Users

    PubMed Central

    Casaletto, Kaitlin B.; Moore, David J.; Woods, Steven Paul; Umlauf, Anya; Scott, J. C.; Heaton, Robert K.

    2016-01-01

    Objective Substance use disorders are highly comorbid with and contribute to the increased prevalence of neurocognitive dysfunction observed in HIV infection. Despite their adverse impact on everyday functioning, there are currently no compensatory-based neurorehabilitation interventions validated for use among HIV+ substance users (HIV/SUD). This study examined the effectiveness of Goal Management Training (GMT) alone or GMT as part of a metacognitive training among HIV/SUD individuals with executive dysfunction. Methods Ninety HIV/SUD individuals were randomized to a single 15-minute session: 1) GMT (n=30); 2) GMT plus metacognitive training (neurocognitive awareness; GMT+Meta; n=30); or 3) active control (n=30). Following a brief neurocognitive battery and study condition, participants performed a complex laboratory-based function task, Everyday Multitasking Test (Everyday MT), during which metacognition (awareness) was evaluated. Results There was an increasing, but nonsignificant tendency for better Everyday MT performances across study conditions (Control≤GMT≤GMT+Meta; ps<0.08). Post-hoc analyses showed that GMT and GMT+Meta groups demonstrated small benefits (d=0.20–0.27) compared to the control arm but did not differ from one another (ds<0.10). When GMT groups were combined, there were significant medium effect-size benefits in Everyday MT performance and metacognitive task appraisals as compared to the control condition. Among participants who underwent GMT, benefits were most prominent in persons with poorer pre-training dual-tasking ability, depression, and methamphetamine use disorders (ds=0.35–1.04). Conclusions A brief compensatory strategy has benefits for everyday multitasking and metacognition among HIV+ substance users with executive dysfunction. Future work exploring more intensive trainings, potentially complimentary to other restorative approaches and/or pharmacological treatments, is warranted. PMID:26753986

  14. Trial Vocal Fold Injection Predicts Thyroplasty Outcomes in Nonparalytic Glottic Incompetence.

    PubMed

    Dumberger, Lukas D; Overton, Lewis; Buckmire, Robert A; Shah, Rupali N

    2017-04-01

    Trial vocal fold injection (TVFI) may be used prior to permanent medialization when voice outcome is uncertain. We aimed to determine whether voice outcomes of TVFI are predictive of, or correlate with outcomes after type I Gore-Tex medialization thyroplasty (GMT) in patients with nonparalytic glottic incompetence (GI). Thirty-five patients with nonparalytic GI who underwent TVFI followed by GMT were retrospectively reviewed. Change in voice-related quality of life (VRQOL) after TVFI was compared to change in VRQOL 3 to 9 months after GMT. Similar comparisons were made for change in glottal function index (GFI) and change in grade, roughness, breathiness, asthenia, and strain (GRBAS). Sample correlation coefficients were calculated. Change in VRQOL after TVFI showed good correlation with change in VRQOL after GMT, r = 0.55. Change in GFI after TVFI showed strong correlation with change in GFI after GMT, r = 0.74. Change in GRBAS after TVFI showed excellent correlation with change in GRBAS after GMT, r = 0.90. The TVFI is a useful tool in nonparalytic GI when outcomes from glottic closure procedures are not clear. Voice outcome measures after TVFI strongly correlate with outcomes from GMT. These data may be used to more confidently counsel patients regarding their predicted outcomes of permanent medialization.

  15. Hawaiian Volcano Observatory Seismic Data, January to December 2008

    USGS Publications Warehouse

    Nakata, Jennifer S.; Okubo, Paul G.

    2009-01-01

    The U.S. Geological Survey (USGS), Hawaiian Volcano Observatory (HVO) summary presents seismic data gathered during the year. The seismic summary is offered without interpretation as a source of preliminary data and is complete in that most data for events of M greater than 1.5 are included. All latitude and longitude references in this report are stated in Old Hawaiian Datum. The HVO summaries have been published in various forms since 1956. Summaries prior to 1974 were issued quarterly, but cost, convenience of preparation and distribution, and the large quantities of data necessitated an annual publication, beginning with Summary 74 for the year 1974. Beginning in 2004, summaries are simply identified by the year, rather than by summary number. Summaries originally issued as administrative reports were republished in 2007 as Open-File Reports. All the summaries since 1956 are listed at http://geopubs.wr.usgs.gov/ (last accessed 09/21/2009). In January 1986, HVO adopted CUSP (California Institute of Technology USGS Seismic Processing). Summary 86 includes a description of the seismic instrumentation, calibration, and processing used in recent years. The present summary includes background information about the seismic network to provide the end user an understanding of the processing parameters and how the data were gathered. A report by Klein and Koyanagi (1980) tabulates instrumentation, calibration, and recording history of each seismic station in the network. It is designed as a reference for users of seismograms and phase data and includes and augments the information in the station table in this summary. Figures 11-14 are maps showing computer-located hypocenters. The maps were generated using the Generic Mapping Tools (GMT http://gmt.soest.hawaii.edu/, last accessed 09/21/2009) in place of traditional Qplot maps.

  16. Searching social networks for subgraph patterns

    NASA Astrophysics Data System (ADS)

    Ogaard, Kirk; Kase, Sue; Roy, Heather; Nagi, Rakesh; Sambhoos, Kedar; Sudit, Moises

    2013-06-01

    Software tools for Social Network Analysis (SNA) are being developed which support various types of analysis of social networks extracted from social media websites (e.g., Twitter). Once extracted and stored in a database such social networks are amenable to analysis by SNA software. This data analysis often involves searching for occurrences of various subgraph patterns (i.e., graphical representations of entities and relationships). The authors have developed the Graph Matching Toolkit (GMT) which provides an intuitive Graphical User Interface (GUI) for a heuristic graph matching algorithm called the Truncated Search Tree (TruST) algorithm. GMT is a visual interface for graph matching algorithms processing large social networks. GMT enables an analyst to draw a subgraph pattern by using a mouse to select categories and labels for nodes and links from drop-down menus. GMT then executes the TruST algorithm to find the top five occurrences of the subgraph pattern within the social network stored in the database. GMT was tested using a simulated counter-insurgency dataset consisting of cellular phone communications within a populated area of operations in Iraq. The results indicated GMT (when executing the TruST graph matching algorithm) is a time-efficient approach to searching large social networks. GMT's visual interface to a graph matching algorithm enables intelligence analysts to quickly analyze and summarize the large amounts of data necessary to produce actionable intelligence.

  17. Visual Data Analysis for Satellites

    NASA Technical Reports Server (NTRS)

    Lau, Yee; Bhate, Sachin; Fitzpatrick, Patrick

    2008-01-01

    The Visual Data Analysis Package is a collection of programs and scripts that facilitate visual analysis of data available from NASA and NOAA satellites, as well as dropsonde, buoy, and conventional in-situ observations. The package features utilities for data extraction, data quality control, statistical analysis, and data visualization. The Hierarchical Data Format (HDF) satellite data extraction routines from NASA's Jet Propulsion Laboratory were customized for specific spatial coverage and file input/output. Statistical analysis includes the calculation of the relative error, the absolute error, and the root mean square error. Other capabilities include curve fitting through the data points to fill in missing data points between satellite passes or where clouds obscure satellite data. For data visualization, the software provides customizable Generic Mapping Tool (GMT) scripts to generate difference maps, scatter plots, line plots, vector plots, histograms, timeseries, and color fill images.

  18. Basic to Advanced InSAR Processing: GMTSAR

    NASA Astrophysics Data System (ADS)

    Sandwell, D. T.; Xu, X.; Baker, S.; Hogrelius, A.; Mellors, R. J.; Tong, X.; Wei, M.; Wessel, P.

    2017-12-01

    Monitoring crustal deformation using InSAR is becoming a standard technique for the science and application communities. Optimal use of the new data streams from Sentinel-1 and NISAR will require open software tools as well as education on the strengths and limitations of the InSAR methods. Over the past decade we have developed freely available, open-source software for processing InSAR data. The software relies on the Generic Mapping Tools (GMT) for the back-end data analysis and display and is thus called GMTSAR. With startup funding from NSF, we accelerated the development of GMTSAR to include more satellite data sources and provide better integration and distribution with GMT. In addition, with support from UNAVCO we have offered 6 GMTSAR short courses to educate mostly novice InSAR users. Currently, the software is used by hundreds of scientists and engineers around the world to study deformation at more than 4300 different sites. The most challenging aspect of the recent software development was the transition from image alignment using the cross-correlation method to a completely new alignment algorithm that uses only the precise orbital information to geometrically align images to an accuracy of better than 7 cm. This development was needed to process a new data type that is being acquired by the Sentinel-1A/B satellites. This combination of software and open data is transforming radar interferometry from a research tool into a fully operational time series analysis tool. Over the next 5 years we are planning to continue to broaden the user base through: improved software delivery methods; code hardening; better integration with data archives; support for high level products being developed for NISAR; and continued education and outreach.

  19. Overshooting cloud top, variation of tropopause and severe storm formation

    NASA Technical Reports Server (NTRS)

    Hung, R. J.; Smith, R. E.

    1984-01-01

    The development of severe multicell thunderstorms leading to the touchdown of six tornados near Pampa, TX, on May 19-20, 1982, is characterized in detail on the basis of weather maps, rawinsonde data, and radar summaries, and the results are compared with GOES rapid-scan IR images. The multicell storm cloud is shown to have formed beginning at 1945 GMT at the point of highest horizontal moisture convergence and lowest tropopause height and to have penetrated the tropopause at 2130 GMT, reaching a maximum altitude and a cloud-top black-body temperature 9 C lower than the tropopause temperature at 2245 GMT and collapsing about 20 min, when the firt tornado touched down. The value of the real-time vertical profiles provided by satellite images in predicting which severe storms will produce tornados or other violent phenomena is stressed.

  20. Airborne Measurements of Atmospheric Volume Scattering Coefficients in Northern Europe, Summer, 1978

    DTIC Science & Technology

    1980-06-01

    in the southwestern quadrant . At 1200 GMT there was a 1000 millibar low centered near Genoa with a warm front east and southeast to the Adriatic Sea...occluded front 5’ west of the Irish coast. The track was in the northeast quadrant of the high with northeasterly surlace flow. At 1200 GMT a small 1025...The air mass was maritime polar. The satellite map for 1309 GM F showed thin clouds over western Europa aad heavier cloud cover over eastern ’ur:,pe

  1. Global Mobility Task: index for evaluating motor impairment and motor rehabilitation programs in Parkinson's disease patients.

    PubMed

    Peppe, A; Ranaldi, A; Chiavalon, C; Gasbarra, A; Collepardo, A; Romeo, R; Pasqualetti, P; Caltagirone, C

    2007-09-01

    In this study, the validity of a motor task, i.e., the Global Mobility Task (GMT), was assessed in a group of Parkinson's disease (PD) patients. Fifty-eight PD patients (mean age: 68.7 years) and 18 healthy subjects (mean age: 65.8 years) were enrolled in the study. The GMT measures the ability of an adult to roll over on the floor and stand up in five steps using two parameters: 'Time' and 'Score', i.e., the time needed and the ability to perform each step of the task. As the GMT has never been evaluated before, internal consistency and concurrent and discriminative validity were considered in assessing its characteristics in a group of PD patients at the beginning and at the end of a motor rehabilitation program. To determine whether the GMT could also quantify the extrapyramidal impairment, we compared data collected using this task with data obtained using clinical scales such as the Unified Parkinson's Disease Rating Scale III (UPDRS part III) and Hoehn & Yahr's score. Results showed that the GMT had good consistency and inter-rater reproducibility, was closely related to clinical scales and was able to detect the amelioration of extrapyramidal symptoms at the end of the motor rehabilitation program. we propose the GMT as a tool for measuring impaired mobility in PD patients and for evaluating the objective effects of motor rehabilitation programs.

  2. Goal Management Training and Mindfulness Meditation improve executive functions and transfer to ecological tasks of daily life in polysubstance users enrolled in therapeutic community treatment.

    PubMed

    Valls-Serrano, Carlos; Caracuel, Alfonso; Verdejo-Garcia, Antonio

    2016-08-01

    We have previously shown that Goal Management Training+Mindfulness Meditation (GMT+MM) improves executive functions in polysubstance users enrolled in outpatient treatment. The aim of this study was to establish if GMT+MM has similar positive effects on executive functions in polysubstance users in residential treatment, and if executive functions' gains transfer to more ecologically valid goal-oriented tasks. Thirty-two polysbustance users were randomly allocated to eight weeks of GMT+MM (n=16) or control, i.e., no-intervention (n=16); both groups received treatment as usual. Outcome measures included performance in laboratory tasks of basic and complex executive functions (i.e., basic: working memory and inhibition; complex: planning and self-regulation) and in an ecological task of goal-directed behavior (the Multiple Errands Test - contextualized version, MET-CV) measured post-interventions. Results showed that GMT+MM was superior to control in improving basic measures of working memory (Letter-number sequencing; F=4.516, p=0.049) and reflection impulsivity (Information Sampling Test; F=6.217, p=0.018), along with initial thinking times during planning (Zoo Map Test; F=8.143, p=0.008). In addition, GMT+MM was superior to control in improving performance in the MET-CV (task failures; F=8.485, p=0.007). Our findings demonstrate that GMT+MM increases reflective processes and the achievement of goals in daily activities, furthermore ecological test can detects changes easily than laboratory tasks. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

  3. Interactive Geophysical Mapping on the Web

    NASA Astrophysics Data System (ADS)

    Meertens, C.; Hamburger, M.; Estey, L.; Weingroff, M.; Deardorff, R.; Holt, W.

    2002-12-01

    We have developed a set of interactive, web-based map utilities that make geophysical results accessible to a large number and variety of users. These tools provide access to pre-determined map regions via a simple Html/JavaScript interface or to user-selectable areas using a Java interface to a Generic Mapping Tools (GMT) engine. Users can access a variety of maps, satellite images, and geophysical data at a range of spatial scales for the earth and other planets of the solar system. Developed initially by UNAVCO for study of global-scale geodynamic processes, users can choose from a variety of base maps (satellite mosaics, global topography, geoid, sea-floor age, strain rate and seismic hazard maps, and others) and can then add a number of geographic and geophysical overlays for example coastlines, political boundaries, rivers and lakes, NEIC earthquake and volcano locations, stress axes, and observed and model plate motion and deformation velocity vectors representing a compilation of 2933 geodetic measurements from around the world. The software design is flexible allowing for construction of special editions for different target audiences. Custom maps been implemented for UNAVCO as the "Jules Verne Voyager" and "Voyager Junior", for the International Lithosphere Project's "Global Strain Rate Map", and for EarthScope Education and Outreach as "EarthScope Voyager Jr.". For the later, a number of EarthScope-specific features have been added, including locations of proposed USArray (seismic), Plate Boundary Observatory (geodetic), and San Andreas Fault Observatory at Depth sites plus detailed maps and geographically referenced examples of EarthScope-related scientific investigations. In addition, we are developing a website that incorporates background materials and curricular activities that encourage users to explore Earth processes. A cluster of map processing computers and nearly a terabyte of disk storage has been assembled to power the generation of interactive maps and provide space for a very large collection of map data. A portal to these map tools can be found at: http://jules.unavco.ucar.edu.

  4. Interactive Web Interface to the Global Strain Rate Map Project

    NASA Astrophysics Data System (ADS)

    Meertens, C. M.; Estey, L.; Kreemer, C.; Holt, W.

    2004-05-01

    An interactive web interface allows users to explore the results of a global strain rate and velocity model and to compare them to other geophysical observations. The most recent model, an updated version of Kreemer et al., 2003, has 25 independent rigid plate-like regions separated by deformable boundaries covered by about 25,000 grid areas. A least-squares fit was made to 4900 geodetic velocities from 79 different geodetic studies. In addition, Quaternary fault slip rate data are used to infer geologic strain rate estimates (currently only for central Asia). Information about the style and direction of expected strain rate is inferred from the principal axes of the seismic strain rate field. The current model, as well as source data, references and an interactive map tool, are located at the International Lithosphere Program (ILP) "A Global Strain Rate Map (ILP II-8)" project website: http://www-world-strain-map.org. The purpose of the ILP GSRM project is to provide new information from this, and other investigations, that will contribute to a better understanding of continental dynamics and to the quantification of seismic hazards. A unique aspect of the GSRM interactive Java map tool is that the user can zoom in and make custom views of the model grid and results for any area of the globe selecting strain rate and style contour plots and principal axes, observed and model velocity fields in specified frames of reference, and geologic fault data. The results can be displayed with other data sets such Harvard CMT earthquake focal mechanisms, stress directions from the ILP World Stress Map Project, and topography. With the GSRM Java map tool, the user views custom maps generated by a Generic Mapping Tool (GMT) server. These interactive capabilities greatly extend what is possible to present in a published paper. A JavaScript version, using pre-constructed maps, as well as a related information site have also been created for broader education and outreach access. The GSRM map tool will be demonstrated and latest model GSRM 1.1 results, containing important new data for Asia, Iran, western Pacific, and Southern California, will be presented.

  5. Doppler Imaging of Exoplanets and Brown Dwarfs

    NASA Astrophysics Data System (ADS)

    Crossfield, I.; Biller, B.; Schlieder, J.; Deacon, N.; Bonnefoy, M.; Homeier, D.; Allard, F.; Buenzli, E.; Henning, T.; Brandner, W.; Goldman, Bertr; Kopytova, T.

    2014-03-01

    Doppler Imaging produces 2D global maps. When applied to cool planets or more massive brown dwarfs, it can map atmospheric features and track global weather patterns. The first substellar map, of the 2pc-distant brown dwarf Luhman 16B (Crossfeld et al. 2014), revealed patchy regions of thin & thick clouds. Here, I investigate the feasibility of future Doppler Imaging of additional objects. Searching the literature, I find that all 3 of P, v sin i, and variability are published for 22 brown dwarfs. At least one datum exists for 333 targets. The sample is very incomplete below ~L5; we need more surveys to find the best targets for Doppler Imaging! I estimate limiting magnitudes for Doppler Imaging with various hi-resolution near-infrared spectrographs. Only a handful of objects - at the M/L and L/T transitions - can be mapped with current tools. Large telescopes such as TMT and GMT will allow Doppler Imaging of many dozens of brown dwarfs and the brightest exoplanets. More targets beyond type L5 likely remain to be found. Future observations will let us probe the global atmospheric dynamics of many diverse objects.

  6. Abbreviated Goal Management Training Shows Preliminary Evidence as a Neurorehabilitation Tool for HIV-associated Neurocognitive Disorders among Substance Users.

    PubMed

    Casaletto, Kaitlin B; Moore, David J; Woods, Steven Paul; Umlauf, Anya; Scott, J C; Heaton, Robert K

    2016-01-01

    Substance use disorders are highly comorbid with and contribute to the increased prevalence of neurocognitive dysfunction observed in HIV infection. Despite their adverse impact on everyday functioning, there are currently no compensatory-based neurorehabilitation interventions validated for use among HIV+ substance users (HIV/SUD). This study examined the effectiveness of goal management training (GMT) alone or GMT as part of a metacognitive training among HIV/SUD individuals with executive dysfunction. Ninety HIV/SUD individuals were randomized to a single 15-min session: (1) GMT (n = 30); (2) GMT plus metacognitive training (neurocognitive awareness; GMT + Meta; n = 30); or (3) active control (n = 30). Following a brief neurocognitive battery and study condition, participants performed a complex laboratory-based function task, Everyday Multitasking Test (Everyday MT), during which metacognition (awareness) was evaluated. There was an increasing, but non-significant tendency for better Everyday MT performances across study conditions (Control ≤ GMT ≤ GMT + Meta; ps < .08). Post hoc analyses showed that GMT and GMT + Meta groups demonstrated small benefits (d = .20-.27) compared to the control arm but did not differ from one another (ds < .10). When GMT groups were combined, there were significant medium effect size benefits in Everyday MT performance and metacognitive task appraisals as compared to the control condition. Among participants who underwent GMT, benefits were most prominent in persons with poorer pre-training dual-tasking ability, depression, and methamphetamine use disorders (ds = .35-1.04). A brief compensatory strategy has benefits for everyday multitasking and metacognition among HIV+ substance users with executive dysfunction. Future work exploring more intensive trainings, potentially complimentary to other restorative approaches and/or pharmacological treatments, is warranted.

  7. Pain referral and regional deep tissue hyperalgesia in experimental human hip pain models.

    PubMed

    Izumi, Masashi; Petersen, Kristian Kjær; Arendt-Nielsen, Lars; Graven-Nielsen, Thomas

    2014-04-01

    Hip disorder patients typically present with extensive pain referral and hyperalgesia. To better understand underlying mechanisms, an experimental hip pain model was established in which pain referrals and hyperalgesia could be studied under standardized conditions. In 16 healthy subjects, pain was induced by hypertonic saline injection into the gluteus medius tendon (GMT), adductor longus tendon (ALT), or gluteus medius muscle (GMM). Isotonic saline was injected contralaterally as control. Pain intensity was assessed on a visual analogue scale (VAS), and subjects mapped the pain distribution. Before, during, and after injections, passive hip joint pain provocation tests were completed, together with quantitative sensory testing as follows: pressure pain thresholds (PPTs), cuff algometry pain thresholds (cuff PPTs), cutaneous pin-prick sensitivity, and thermal pain thresholds. Hypertonic saline injected into the GMT resulted in higher VAS scores than hypertonic injections into the ALT and GMM (P<.05). Referred pain areas spread to larger parts of the leg after GMT and GMM injections compared with more regionalized pain pattern after ALT injections (P<.05). PPTs at the injection site were decreased after hypertonic saline injections into GMT and GMM compared with baseline, ALT injections, and isotonic saline. Cuff PPTs from the thigh were decreased after hypertonic saline injections into the ALT compared with baseline, GMT injections, and isotonic saline (P<.05). More subjects had positive joint pain provocation tests after hypertonic compared with isotonic saline injections (P<.05), indicating that this provocation test also assessed hyperalgesia in extra-articular soft tissues. The experimental models may open for better understanding of pain mechanisms associated with painful hip disorders. Copyright © 2014 International Association for the Study of Pain. Published by Elsevier B.V. All rights reserved.

  8. Antiphospholipid antibody profiles in lupus nephritis with glomerular microthrombosis: a prospective study of 124 cases.

    PubMed

    Zheng, Hui; Chen, Yi; Ao, Wen; Shen, Yan; Chen, Xiao-wei; Dai, Min; Wang, Xiao-dong; Yan, Yu-cheng; Yang, Cheng-de

    2009-01-01

    Glomerular microthrombosis (GMT) is a common vascular change in patients with lupus nephritis (LN). The mechanism underlying GMT is largely unknown. Although several studies have reported the association of antiphospholipid antibodies (aPL) with GMT, the relation between GMT and aPL remains controversial. Previous studies have demonstrated that some aPL could bind to several hemostatic and fibrinolytic proteases that share homologous enzymatic domains. Of the protease-reactive aPL, some can inhibit the anticoagulant activity of activated protein C and the fibrinolytic function of plasmin, and hinder the antithrombin inactivation of thrombin. The purpose of this study was to investigate the prevalence of GMT in LN patients and examine the relation between the aPL profiles (including some protease-reactive aPL) and GMT. Renal biopsy specimens were examined for the presence of glomerular microthrombi. Plasma samples from 25 LN patients with GMT (LN-GMT group) and 99 LN patients without GMT (LN-non-GMT group) were tested for lupus anticoagulant and antibodies against cardiolipin, beta2 glycoprotein I, plasmin, thrombin, tissue plasminogen activator, and annexin II. The prevalence of GMT in LN patients was 20.2%. Compared with the LN-non-GMT group, the LN-GMT group had an elevated systemic lupus erythematosus disease activity index; elevated renal tissue injury activity and chronicity indices; elevated serum creatinine, blood urea nitrogen, and proteinuria levels; a lower serum C3 level and much intense glomerular C3, C1q staining; and a higher frequency of hypertension (P < 0.05 for all). Additionally, the detection rate of lupus anticoagulant, immunoglobulin G (IgG) anti-beta2 glycoprotein I and anti-thrombin antibodies were higher in the LN-GMT group than in the LN-non-GMT group (P < 0.05 for all). No statistical differences were found in the detection rates of IgG anti-cardiolipin, plasmin, tissue plasminogen activator, or annexin II antibodies (P > 0.05 for all). No detectable difference in IgM autoantibodies to the above antigens was observed between the two groups. GMT occurs in approximately 20.2% of LN patients. Patients with GMT have severer renal tissue injuries and poorer renal functions than patients without GMT. The lupus anticoagulant and antibodies against beta2 glycoprotein I and thrombin may play a role in GMT.

  9. Antiphospholipid antibody profiles in lupus nephritis with glomerular microthrombosis: a prospective study of 124 cases

    PubMed Central

    Zheng, Hui; Chen, Yi; Ao, Wen; Shen, Yan; Chen, Xiao-wei; Dai, Min; Wang, Xiao-dong; Yan, Yu-cheng; Yang, Cheng-de

    2009-01-01

    Introduction Glomerular microthrombosis (GMT) is a common vascular change in patients with lupus nephritis (LN). The mechanism underlying GMT is largely unknown. Although several studies have reported the association of antiphospholipid antibodies (aPL) with GMT, the relation between GMT and aPL remains controversial. Previous studies have demonstrated that some aPL could bind to several hemostatic and fibrinolytic proteases that share homologous enzymatic domains. Of the protease-reactive aPL, some can inhibit the anticoagulant activity of activated protein C and the fibrinolytic function of plasmin, and hinder the antithrombin inactivation of thrombin. The purpose of this study was to investigate the prevalence of GMT in LN patients and examine the relation between the aPL profiles (including some protease-reactive aPL) and GMT. Methods Renal biopsy specimens were examined for the presence of glomerular microthrombi. Plasma samples from 25 LN patients with GMT (LN-GMT group) and 99 LN patients without GMT (LN-non-GMT group) were tested for lupus anticoagulant and antibodies against cardiolipin, β2 glycoprotein I, plasmin, thrombin, tissue plasminogen activator, and annexin II. Results The prevalence of GMT in LN patients was 20.2%. Compared with the LN-non-GMT group, the LN-GMT group had an elevated systemic lupus erythematosus disease activity index; elevated renal tissue injury activity and chronicity indices; elevated serum creatinine, blood urea nitrogen, and proteinuria levels; a lower serum C3 level and much intense glomerular C3, C1q staining; and a higher frequency of hypertension (P < 0.05 for all). Additionally, the detection rate of lupus anticoagulant, immunoglobulin G (IgG) anti-β2 glycoprotein I and anti-thrombin antibodies were higher in the LN-GMT group than in the LN-non-GMT group (P < 0.05 for all). No statistical differences were found in the detection rates of IgG anti-cardiolipin, plasmin, tissue plasminogen activator, or annexin II antibodies (P > 0.05 for all). No detectable difference in IgM autoantibodies to the above antigens was observed between the two groups. Conclusions GMT occurs in approximately 20.2% of LN patients. Patients with GMT have severer renal tissue injuries and poorer renal functions than patients without GMT. The lupus anticoagulant and antibodies against β2 glycoprotein I and thrombin may play a role in GMT. PMID:19545416

  10. Sturckow in Node 1/Unity module with power tool

    NASA Image and Video Library

    1998-12-11

    S88-E-5126 (12-11-98) --- Astronaut Frederick W. Sturckow, pilot, is pictured with a power tool near the hatchway between Unity and a pressurized mating adapter (PMA). Members of the STS-88 crew used this type tool and others to attach handrails and accessories and perform other tasks on Unity. The photo was taken with an electronic still camera (ESC) at 01:09:40 GMT, Dec. 11.

  11. Tamoxifen enhances therapeutic effects of gemcitabine on cholangiocarcinoma tumorigenesis.

    PubMed

    Jing, Gu; Yuan, Kaiyu; Turk, Amy N; Jhala, Nirag C; Arnoletti, Juan P; Zhang, Kui; McDonald, Jay M; Chen, Yabing

    2011-06-01

    Cholangiocarcinoma is a highly malignant tumor with limited therapeutic options. We have previously reported that tamoxifen (TMX) induces apoptosis of cholangiocarcinoma cells and reduces cholangiocarcinoma tumorigenesis in mice. In the present studies, we determined the effect of combination therapy of TMX and gemcitabine (GMT), another chemotherapeutical reagent for many cancers, on cholangiocarcinoma tumorigenesis and investigated the responsible mechanisms. GMT inhibited cell growth and induced apoptosis of cholangiocarcinoma cells in a concentration-dependent manner. TMX enhanced GMT-induced apoptosis of cholangiocarcinoma cells. Consistently, GMT (15 mg/kg) inhibited cholangiocarcinoma tumorigenesis in nude mice by 50%. TMX (15 mg/kg) enhanced the inhibitory effect of GMT on tumorigenesis by 33%. The inhibition of tumor growth correlated with enhanced apoptosis in tumor tissues. To elucidate the mechanisms underlying the additive effects of TMX on GMT-induced apoptosis, we determined the activation of caspases in cholangiocarcinoma cells exposed to GMT, TMX, or both. Activation of caspases 9 and 3, as well as cytochrome c release to the cytosol, was demonstrated in cells exposed to both reagents. In contrast, TMX activated caspase 2, whereas GMT had no effect. Inhibition of caspase 2 activation decreased TMX-, but not GMT-, induced activation of caspase 3 and apoptosis of cholangiocarcinoma cells. Similarly, activation of caspase 2 was found in tumors from TMX-treated mice, but not GMT-treated mice. Therefore, the enhanced effect of TMX on GMT-induced cholangiocarcinoma cell death is partially mediated by activation of caspase 2. TMX and GMT both induce apoptosis and inhibit cholangiocarcinoma tumorigenesis, which may be attributed to the activation of distinct apoptosis signals by TMX and GMT. Our studies provide in vivo evidence and molecular insight to support the use of TMX and GMT in combination as an effective therapy for cholangiocarcinoma.

  12. Directed Differentiation of Embryonic Stem Cells Into Cardiomyocytes by Bacterial Injection of Defined Transcription Factors.

    PubMed

    Bai, Fang; Ho Lim, Chae; Jia, Jingyue; Santostefano, Katherine; Simmons, Chelsey; Kasahara, Hideko; Wu, Weihui; Terada, Naohiro; Jin, Shouguang

    2015-10-09

    Forced expression of defined transcriptional factors has been well documented as an effective method for cellular reprogramming or directed differentiation. However, transgene expression is not amenable for therapeutic application due to potential insertional mutagenesis. Here, we have developed a bacterial type III secretion system (T3SS)-based protein delivery tool and shown its application in directing pluripotent stem cell differentiation by a controlled delivery of transcription factors relevant to early heart development. By fusing to an N-terminal secretion sequence for T3SS-dependent injection, three transcriptional factors, namely Gata4, Mef2c, and Tbx5 (abbreviated as GMT), were translocated into murine embryonic stem cells (ESCs), where the proteins are effectively targeted to the nucleus with an average intracellular half-life of 5.5 hours. Exogenous GMT protein injection activated the cardiac program, and multiple rounds of GMT protein delivery significantly improved the efficiency of ESC differentiation into cardiomyocytes. Combination of T3SS-mediated GMT delivery and Activin A treatment showed an additive effect, resulting in on average 60% of the ESCs differentiated into cardiomyocytes. ESC derived cardiomyocytes displayed spontaneous rhythmic contractile movement as well as normal hormonal responses. This work serves as a foundation for the bacterial delivery of multiple transcription factors to direct cell fate without jeopardizing genomic integrity.

  13. Directed Differentiation of Embryonic Stem Cells Into Cardiomyocytes by Bacterial Injection of Defined Transcription Factors

    PubMed Central

    Bai, Fang; Ho Lim, Chae; Jia, Jingyue; Santostefano, Katherine; Simmons, Chelsey; Kasahara, Hideko; Wu, Weihui; Terada, Naohiro; Jin, Shouguang

    2015-01-01

    Forced expression of defined transcriptional factors has been well documented as an effective method for cellular reprogramming or directed differentiation. However, transgene expression is not amenable for therapeutic application due to potential insertional mutagenesis. Here, we have developed a bacterial type III secretion system (T3SS)-based protein delivery tool and shown its application in directing pluripotent stem cell differentiation by a controlled delivery of transcription factors relevant to early heart development. By fusing to an N-terminal secretion sequence for T3SS-dependent injection, three transcriptional factors, namely Gata4, Mef2c, and Tbx5 (abbreviated as GMT), were translocated into murine embryonic stem cells (ESCs), where the proteins are effectively targeted to the nucleus with an average intracellular half-life of 5.5 hours. Exogenous GMT protein injection activated the cardiac program, and multiple rounds of GMT protein delivery significantly improved the efficiency of ESC differentiation into cardiomyocytes. Combination of T3SS-mediated GMT delivery and Activin A treatment showed an additive effect, resulting in on average 60% of the ESCs differentiated into cardiomyocytes. ESC derived cardiomyocytes displayed spontaneous rhythmic contractile movement as well as normal hormonal responses. This work serves as a foundation for the bacterial delivery of multiple transcription factors to direct cell fate without jeopardizing genomic integrity. PMID:26449528

  14. New 3D seismicity maps using chromo-stereoscopy with two alternative freewares

    NASA Astrophysics Data System (ADS)

    Okamoto, Y.

    2011-12-01

    Seismicity maps play a key role in an introduction of geosciences studies or outreach programs. Various techniques are used in order to show earthquakes in a three dimensional field. To use "chromo-stereoscopy" is our simple and easier-making solution. The Chroma Depth 3D Glasses are employed for this purpose. The glasses consist of two transparent blazed grating films covered with a paper holder and cost a little (1 US$). Looking through these glasses, the colored chart turns into three dimensional perspective due to the mechanism that the color codes make a depth dimension with dispersion. We use two complementary freewares to make maps, the GMT (Generic Mapping Tools, Wessel and Smith.1988) and the POV-Ray (Persistence of Vision Pty. Ltd. 2004). The two softwares have their own advantages; the GMT is specialized for map making with simple scripts, while the POV-Ray produces realistic 3D rendering images with more complicated scripts. The earthquakes are plotted with the rainbow color codes depending on their depths in a black background as printed or PC images. Therefore, the red colored shallow earthquakes are float in front and blue colored ones sink deeper. This effect is so amazing that the students who first wear these glasses are strongly moved and fascinated with this simple mechanism. The data used here are from JMA seismicity catalogue and USGS (ANSS) catalogue. The POV-Ray version needs coastline data, so we got them from the Coastline Extractor (NGDC) web site. Also, the POR-Ray has no function to draw lines in three dimensions, so we had to make some trials for showing them in relief. The main target of our map is "the Wadati-Beniof zone", in which the sub-ducting oceanic plate surface is fringed by deeper earthquakes colored yellow, green to blue. The active volcanic regions such as the Hawaii islands or the active fault regions such as the San Andreas Fault are also effective targets of our method. However, since their shallow complicated seismic structures rather than the sub-ducting plate boundaries, the amazing effect is somewhat spoiled. Now, we try to render a transparent sphere model to improve it. The future task is to evaluate the three dimensional effect quantitatively. Present version of our maps has some back draws, but their simple and easier-making process is quite suitable for study in class rooms and outreach purpose, not only for geosciences study itself but also for optics study at the secondary levels. The maps described here are now available in our website (http://www.osaka-kyoiku.ac.jp/ yossi/).

  15. Bias correction in Global Mean Temperature comparisons between Global Climate Models and implications for the deterministic and stochastic dynamics

    NASA Astrophysics Data System (ADS)

    Chapman, Sandra; Stainforth, David; Watkins, Nicholas

    2017-04-01

    Global mean temperature (GMT) provides a simple means of benchmarking a broad ensemble of global climate models (GCMs) against past observed GMT which in turn provide headline assessments of the consequences of possible future forcing scenarios. The slow variations of past changes in GMT seen in different GCMs track each other [1] and the observed GMT reasonably closely. However, the different GCMs tend to generate GMT time-series which have absolute values that are offset with respect to each other [2]. Subtracting these offsets is an integral part of comparisons between ensembles of GCMs and observed past GMT. We will discuss how this constrains how the GCMs are related to each other. The GMT of a given GCM is a macroscopic reduced variable that tracks a subset of the full information contained in the time evolving solution of that GCM. If the GMT slow timescale dynamics of different GCMs is to a good approximation the same, subject to a linear translation, then the phenomenology captured by this dynamics is essentially linear; any feedback is to leading order linear in GMT. It then follows that a linear energy balance evolution equation for GMT is sufficient to reproduce the slow timescale GMT dynamics, provided that the appropriate effective heat capacity and feedback parameters are known. As a consequence, the GCM's GMT timeseries may underestimate the impact of, and uncertainty in, the outcomes of future forcing scenarios. The offset subtraction procedure identifies a slow time-scale dynamics in model generated GMT. Fluctuations on much faster timescales do not typically track each other from one GCM to another, with the exception of major forcing events such as volcanic eruptions. This suggests that the GMT time-series can be decomposed into a slow and fast timescale which naturally leads to stochastic reduced energy balance models for GMT. [1] IPCC Chapter 9 P743 and fig 9.8,IPCC TS.1 [2] see e.g. [Mauritsen et al., Tuning the Climate of a Global Model, Journal of Advances in Modelling Earth Systems, 2012] 4, IPCC SPM.6

  16. An ocean gazetteer for education and research

    NASA Astrophysics Data System (ADS)

    Delaney, R.; Staudigel, D.; Staudigel, H.

    2003-04-01

    Global travel, economy, and news coverage often challenge the student's and teacher's knowledge of the geography of the seas. The International Hydrographic Organization (IHO) has published a description of all the major seas making up earth's oceans, but there is currently no electronic tool that identifies them on a digital map. During an internship at Scripps Institution of Oceanography, we transferred the printed visual description of the seas from IHO publication 23 into a digital format. This digital map was turned into a (Flash) web application that allows a user to identify any of the IHO seas on a world map, simply by moving the computer cursor over it. In our presentation, we will describe the path taken to produce this web application and the learning process involved in this path during our internship at Scripps. The main steps in this process included the digitization of the official IHO maps, the transfer of this information onto a modern digital map by Smith and Sandwell. Adjustments were necessary due to the fact that many of the landmasses were placed incorrectly on a lat/long grid, off by as much as 100km. Boundaries between seas were often misrepresented by the IHO as straight lines on a Mercator projection. Once the digitization of the seas was completed we used the 2d animation environment Flash and we produced an interactive map environment that allows any teacher or student of ocean geography to identify an ocean by name and location. Aside from learning about the geography of the oceans, we were introduced to the use of digitizers, we learned to make maps using Generic Mapping Tools (GMT) and digital global bathymetry data sets, and we learned about map projections. We studied Flash to produce an interactive map of the oceans that displays bathymetry and topography, highlighting any particular sea the cursor moves across. The name of the selected sea in our Flash application appears in a textbox on the bottom of the map. The result of this project can be found at http://earthref.org/PACER/beta/IH023seas.

  17. Temporal Comparisons of Internet Topology

    DTIC Science & Technology

    2014-06-01

    Number CAIDA Cooperative Association of Internet Data Analysis CDN Content Delivery Network CI Confidence Interval DoS denial of service GMT Greenwich...the CAIDA data. Our methods include analysis of graph theoretical measures as well as complex network and statistical measures that will quantify the...tool that probes the Internet for topology analysis and performance [26]. Scamper uses network diagnostic tools, such as traceroute and ping, to probe

  18. Rebased Global Mean Temperature comparisons between Global Climate Models and observed Global Mean Temperature: constraints and implications

    NASA Astrophysics Data System (ADS)

    Chapman, S. C.; Stainforth, D. A.; Watkins, N. W.

    2017-12-01

    One of the benchmarks of global climate models (GCMs) is that their slow, decadal or longer timescale variations in past changes in Global Mean Temperature (GMT) track each other [1] and the observed GMT reasonably closely. However, the different GCMs tend to generate GMT time-series which have absolute values that are offset with respect to each other by as much as 3 degrees [2]. Subtracting these offsets, or rebasing, is an integral part of comparisons between observed past GMT and the GMT anomalies generated by ensembles of GCMs. We will formalize how rebasing introduces constraints in how the GCMs are related to each other. The GMT of a given GCM is a macroscopic reduced variable that tracks a subset of the full information contained in the time evolving solution of that GCM. If the GMT slow timescale dynamics of different GCMs is to a good approximation the same subject to a linear translation, then the phenomenology captured by this dynamics is essentially linear. Feedbacks in the different models when expressed through GMT are then to leading order linear. It then follows that a linear energy balance evolution equation for GMT is sufficient to reproduce the slow timescale GMT dynamics, given the appropriate effective heat capacity and feedback parameters. As a consequence, the GMT timeseries future projections generated by the GCMs may underestimate the impact of, and uncertainty in, the outcomes of future forcing scenarios. The offset subtraction procedure identifies a slow time-scale dynamics in model generated GMT. Fluctuations on much faster timescales do not typically track each other from one GCM to another, with the exception of major forcing events such as volcanic eruptions. This suggests that the GMT time-series can be decomposed into a slow and fast timescale which naturally leads to stochastic reduced energy balance models for GMT. [1] IPCC Chapter 9 P743 and fig 9.8, IPCC TS.1 [2] see e.g. [Mauritsen et al., Tuning the Climate of a Global Model, Journal of Advances in Modelling Earth Systems, 2012]4, IPCC SPM.6

  19. Voyager Interactive Web Interface to EarthScope

    NASA Astrophysics Data System (ADS)

    Eriksson, S. C.; Meertens, C. M.; Estey, L.; Weingroff, M.; Hamburger, M. W.; Holt, W. E.; Richard, G. A.

    2004-12-01

    Visualization of data is essential in helping scientists and students develop a conceptual understanding of relationships among many complex types of data and keep track of large amounts of information. Developed initially by UNAVCO for study of global-scale geodynamic processes, the Voyager map visualization tools have evolved into interactive, web-based map utilities that can make scientific results accessible to a large number and variety of educators and students as well as the originally targeted scientists. A portal to these map tools can be found at: http://jules.unavco.org. The Voyager tools provide on-line interactive data visualization through pre-determined map regions via a simple HTML/JavaScript interface (for large numbers of students using the tools simultaneously) or through student-selectable areas using a Java interface to a Generic Mapping Tools (GMT) engine. Students can access a variety of maps, satellite images, and geophysical data at a range of spatial scales for the earth and other planets of the solar system. Students can also choose from a variety of base maps (satellite mosaics, global topography, geoid, sea-floor age, strain rate and seismic hazard maps, and others) and can then add a number of geographic and geophysical overlays, for example coastlines, political boundaries, rivers and lakes, earthquake and volcano locations, stress axes, and observed and model plate motion, as well as deformation velocity vectors representing a compilation of over 5000 geodetic measurements from around the world. The related educational website, "Exploring our Dynamic Planet", (http://www.dpc.ucar.edu/VoyagerJr/jvvjrtool.html) incorporates background materials and curricular activities that encourage students to explore Earth processes. One of the present curricular modules is designed for high school students or introductory-level undergraduate non-science majors. The purpose of the module is for students to examine real data to investigate how plate tectonic processes are reflected in observed geophysical phenomena. Constructing maps by controlling map parameters and answering open-ended questions which describe, compare relationships, and work with both observed and model data, promote conceptual understanding of plate tectonics and related processes. The goals of curricular development emphasize inquiry, development of critical thinking skills, and student-centered interests. Custom editions of the map utility have been made as the "Jules Verne Voyager" and "Voyager Junior", for the International Lithosphere Project's "Global Strain Rate Map", and for EarthScope Education and Outreach as "EarthScope Voyager Jr.". For the latter, a number of EarthScope-specific features have been added, including locations of proposed USArray (seismic), Plate Boundary Observatory (geodetic), and San Andreas Fault Observatory at Depth sites, plus detailed maps and geographically referenced examples of EarthScope-related scientific investigations. As EarthScope develops, maps will be updated in `real time' so that students of all ages can use the data in formal and informal educational settings.

  20. GIS Tool for Real-time Decision Making and Analysis of Multidisciplinary Cryosphere Datasets.

    NASA Astrophysics Data System (ADS)

    Roberts, S. D.; Moore, J. A.

    2004-12-01

    In support of the Western Arctic Shelf-Basin Interaction Project(SBI) a web-based interactive mapping server was installed on the USCGC Healy's on-board science computer network during its 2004 spring(HLY-04-02) and summer cruises (HLY-04-03) in the Chukchi and Beaufort Seas. SBI is a National Science Foundation sponsored multi-year and multidisciplinary project studying the biological productivity in the region. The mapping server was developed by the UCAR Joint Office of Science Support(JOSS) using OpenSource GIS tools(University of Minnesota Mapserver and USGS MapSurfer). Additional OpenSource tools such as GMT and MB-Systems were also utilized. The key layers in this system are the current ship track, station locations, multibeam bottom bathymetry, IBCAO bathymetry, DMSP satellite imagery , NOAA AVHRR Sea Surface temperature and all past SBI Project ship tracks and station locations. The ship track and multibeam layers are updated in real-time and the satellite layers are updated daily only during clear weather. In addition to using current high resolution multibeam bathymetry data, a composite high resolution bathymetry layer was created using multibeam data from past cruises in the SBI region. The server provides click-and-drag zooms, pan, feature query, distance measure and lat/lon/depth querys on a polar projection map of the arctic ocean. The main use of the system on the ship was for cruise track and station position planning by the scientists utilizing all available historical data and high resolution bathymetry. It was also the main source of information to all the scientist on board as to the cruise progress and plans. The system permitted on-board scientists to integrate historical cruise information for comparative purposes. A mirror web site was set up on land and the current ship track/station information was copied once a day to this site via a satellite link so people interested SBI research could follow the cruise progress.

  1. Delineating Beach and Dune Morphology from Massive Terrestrial Laser Scanning Data Using the Generic Mapping Tools

    NASA Astrophysics Data System (ADS)

    Zhou, X.; Wang, G.; Yan, B.; Kearns, T.

    2016-12-01

    Terrestrial laser scanning (TLS) techniques have been proven to be efficient tools to collect three-dimensional high-density and high-accuracy point clouds for coastal research and resource management. However, the processing and presenting of massive TLS data is always a challenge for research when targeting a large area with high-resolution. This article introduces a workflow using shell-scripting techniques to chain together tools from the Generic Mapping Tools (GMT), Geographic Resources Analysis Support System (GRASS), and other command-based open-source utilities for automating TLS data processing. TLS point clouds acquired in the beach and dune area near Freeport, Texas in May 2015 were used for the case study. Shell scripts for rotating the coordinate system, removing anomalous points, assessing data quality, generating high-accuracy bare-earth DEMs, and quantifying beach and sand dune features (shoreline, cross-dune section, dune ridge, toe, and volume) are presented in this article. According to this investigation, the accuracy of the laser measurements (distance from the scanner to the targets) is within a couple of centimeters. However, the positional accuracy of TLS points with respect to a global coordinate system is about 5 cm, which is dominated by the accuracy of GPS solutions for obtaining the positions of the scanner and reflector. The accuracy of TLS-derived bare-earth DEM is primarily determined by the size of grid cells and roughness of the terrain surface for the case study. A DEM with grid cells of 4m x 1m (shoreline by cross-shore) provides a suitable spatial resolution and accuracy for deriving major beach and dune features.

  2. Goal Management Training for rehabilitation of executive functions: a systematic review of effectiveness in patients with acquired brain injury.

    PubMed

    Krasny-Pacini, Agata; Chevignard, Mathilde; Evans, Jonathan

    2014-01-01

    To determine if Goal Management Training (GMT) is effective for the rehabilitation of executive functions following brain injury when administered alone or in combination with other interventions. Systematic review, with quality appraisal specific to executive functions research and calculation of effect sizes. Twelve studies were included. Four studies were "Proof-of-principle" studies, testing the potential effectiveness of GMT and eight were rehabilitation studies. Effectiveness was greater when GMT was combined with other interventions. The most effective interventions appeared to be those combing GMT with: Problem Solving Therapy; personal goal setting; external cueing or prompting apply GMT to the current task; personal homework to increase patients' commitment and training intensity; ecological and daily life training activities rather than paper-and-pencil, office-type tasks. Level of support for GMT was higher for studies measuring outcome in terms of increases in participation in everyday activities rather than on measures of executive impairment. Comprehensive rehabilitation programs incorporating GMT, but integrating other approaches, are effective in executive function rehabilitation following brain injury in adults. There is insufficient evidence to support use of GMT as a stand-alone intervention.

  3. Constructing a dispersed fringe sensor prototype for the Giant Magellan Telescope

    NASA Astrophysics Data System (ADS)

    Frostig, Danielle; McLeod, Brian; AGWS Team

    2018-01-01

    The Giant Magellan Telescope (GMT) will be the world’s largest telescope upon completion. The GMT employs seven 8 m primary mirror segments and seven 1 m secondary mirror segments. One challenge of the GMT is keeping the seven pairs of mirror segments on the GMT in phase. In this project, we developed and began assembly on a design for a dispersed fringe sensor prototype consisting of an optical and basic mechanical layout. The prototype design will be tested on the Magellan Clay Telescope as an experiment for future phasing methods to be used on the GMT.

  4. A Novel Method for Producing Light GMT Sheets by a Pneumatic Technique

    NASA Astrophysics Data System (ADS)

    Dai, H.-L.; Rao, Y.-N.

    2015-09-01

    A novel method for producing a kind of light glass-mat- reinforced thermoplastic (GMT) sheets by using a pneumatic technique is presented. The tensile and flexural properties of produced light GMT sheets, with various lengths of glass fibers and PP content, were determined experimentally. Results of the experimental investigation show that the light GMT sheets are fully suitable for engineering applications.

  5. Do Old Errors Always Lead to New Truths? A Randomized Controlled Trial of Errorless Goal Management Training in Brain-Injured Patients.

    PubMed

    Bertens, Dirk; Kessels, Roy P C; Fiorenzato, Eleonora; Boelen, Danielle H E; Fasotti, Luciano

    2015-09-01

    Both errorless learning (EL) and Goal Management Training (GMT) have been shown effective cognitive rehabilitation methods aimed at optimizing the performance on everyday skills after brain injury. We examine whether a combination of EL and GMT is superior to traditional GMT for training complex daily tasks in brain-injured patients with executive dysfunction. This was an assessor-blinded randomized controlled trial conducted in 67 patients with executive impairments due to brain injury of non-progressive nature (minimal post-onset time: 3 months), referred for outpatient rehabilitation. Individually selected everyday tasks were trained using 8 sessions of an experimental combination of EL and GMT or via conventional GMT, which follows a trial-and-error approach. Primary outcome measure was everyday task performance assessed after treatment compared to baseline. Goal attainment scaling, rated by both trainers and patients, was used as secondary outcome measure. EL-GMT improved everyday task performance significantly more than conventional GMT (adjusted difference 15.43, 95% confidence interval [CI] [4.52, 26.35]; Cohen's d=0.74). Goal attainment, as scored by the trainers, was significantly higher after EL-GMT compared to conventional GMT (mean difference 7.34, 95% CI [2.99, 11.68]; Cohen's d=0.87). The patients' goal attainment scores did not differ between the two treatment arms (mean difference 3.51, 95% CI [-1.41, 8.44]). Our study is the first to show that preventing the occurrence of errors during executive strategy training enhances the acquisition of everyday activities. A combined EL-GMT intervention is a valuable contribution to cognitive rehabilitation in clinical practice.

  6. In vivo cardiac cellular reprogramming efficacy is enhanced by angiogenic preconditioning of the infarcted myocardium with vascular endothelial growth factor.

    PubMed

    Mathison, Megumi; Gersch, Robert P; Nasser, Ahmed; Lilo, Sarit; Korman, Mallory; Fourman, Mitchell; Hackett, Neil; Shroyer, Kenneth; Yang, Jianchang; Ma, Yupo; Crystal, Ronald G; Rosengart, Todd K

    2012-12-01

    In situ cellular reprogramming offers the possibility of regenerating functional cardiomyocytes directly from scar fibroblasts, obviating the challenges of cell implantation. We hypothesized that pretreating scar with gene transfer of the angiogenic vascular endothelial growth factor (VEGF) would enhance the efficacy of this strategy. Gata4, Mef2c, and Tbx5 (GMT) administration via lentiviral transduction was demonstrated to transdifferentiate rat fibroblasts into (induced) cardiomyocytes in vitro by cardiomyocyte marker studies. Fisher 344 rats underwent coronary ligation and intramyocardial administration of an adenovirus encoding all 3 major isoforms of VEGF (AdVEGF-All6A(+)) or an AdNull control vector (n=12/group). Lentivirus encoding GMT or a GFP control was administered to each animal 3 weeks later, followed by histologic and echocardiographic analyses. GMT administration reduced the extent of fibrosis by half compared with GFP controls (12 ± 2% vs 24 ± 3%, P<0.01) and reduced the number of myofibroblasts detected in the infarct zone by 4-fold. GMT-treated animals also demonstrated greater density of cardiomyocyte-specific marker beta myosin heavy chain 7(+) cells compared with animals receiving GFP with or without VEGF (P<0.01). Ejection fraction was significantly improved after GMT vs GFP administration (12 ± 3% vs -7 ± 3%, P<0.01). Eight (73%) GFP animals but no GMT animals demonstrated decreased ejection fraction during this interval (P<0.01). Also, improvement in ejection fraction was 4-fold greater in GMT/VEGF vs GMT/null animals (17 ± 2% vs 4 ± 1%, P<0.05). VEGF administration to infarcted myocardium enhances the efficacy of GMT-mediated cellular reprogramming in improving myocardial function and reducing the extent of myocardial fibrosis compared with the use of GMT or VEGF alone.

  7. Association between anti-beta2 glycoprotein I antibodies and renal glomerular C4d deposition in lupus nephritis patients with glomerular microthrombosis: a prospective study of 155 cases.

    PubMed

    Shen, Y; Chen, X-W; Sun, C-Y; Dai, M; Yan, Y-C; Yang, C-D

    2010-09-01

    Glomerular microthrombosis (GMT) is a common vascular change in patients with lupus nephritis (LN). The mechanism underlying GMT is still unknown. In our previous study, we found that the level of IgG anti-beta2 glycoprotein I (beta2GPI) antibodies was higher in the LN-GMT group than in the LN-non-GMT group, which indicated that anti-beta2GPI antibodies may play a role in GMT formation. Many studies have demonstrated that the activation of the classical complement pathway may play a critical role in fetal loss and aPL-induced thrombosis formation. To investigate whether complement activation plays a role in GMT formation and to evaluate its relationship with aPL, we prospectively investigated deposition of C4d in 155 renal biopsy specimens of LN patients. The results revealed a strong relationship between the intensity of glomerular C4d staining and the presence of microthrombi (p < 0.001). The detection rate of IgG anti-beta2GPI antibodies was higher in the LN-GMT group than in the LN-non-GMT group (p < 0.05). Further, the intensity of glomerular C4d staining was significantly related with IgG anti-beta2GPI antibodies (p < 0.05). The results of our study suggest that anti-beta2GPI antibodies may play a role in GMT formation, and this process might involve complement activation.

  8. Climate-change impacts on terrestrial ecosystems and water resources at different global warming levels

    NASA Astrophysics Data System (ADS)

    Tanaka, A.; Takahashi, K.; Shiogama, H.; Hanasaki, N.; Masaki, Y.; Ito, A.; Noda, H.; Hijioka, Y.; Emori, S.

    2016-12-01

    The Paris Agreement of 2015 includes pursuing efforts to limit the increase in the global mean temperature from preindustrial levels (ΔGMT) to 1.5°C, as well as suppressing ΔGMT well below 2°C. However, how impacts of 1.5°C differ from the impacts of 2°C or greater warming is unclear, and further studies covering wider ranges of ΔGMT are required. We arranged climate-change impacts at different ΔGMT levels by employing the outputs from impact assessment simulations based on climate scenarios of five climate models and four radiative forcing scenarios. We then tested whether climate-change impacts at different ΔGMT levels in a range ΔGMT = 1.5-4°C can be derived from those at ΔGMT = 2°C by linear scaling. We assessed impacts on net primary production, CO2 emissions from biomass burning, soil erosion, and surface runoff, at global and regional scales. We found that linearity holds in most regions for net primary production, biomass burning, and surface runoff, but fails for soil erosion. In this session, we discuss at what value of ΔGMT linearity fails for both world and several regional domains.

  9. A pilot investigation of the potential for incorporating lifelog technology into executive function rehabilitation for enhanced transfer of self-regulation skills to everyday life.

    PubMed

    Cuberos-Urbano, Gustavo; Caracuel, Alfonso; Valls-Serrano, Carlos; García-Mochón, Leticia; Gracey, Fergus; Verdejo-García, Antonio

    2018-06-01

    The objective of the study was to identify the potential target and effect size of goal management training (GMT) enhanced with life-logging technology compared with standard GMT on a range of possible primary outcomes reflecting cognitive and ecological aspects of executive functioning and quality of life. Sixteen patients with acquired brain injury involving executive dysfunction were randomly allocated to one of the two interventions: seven weeks of GMT (n = 8), or seven weeks of GMT+Lifelog (n = 8). Outcome measures included a battery of executive function tests, the Dysexecutive Questionnaire (DEX) and the Quality of Life after Brain Injury scale (QOLIBRI), measured pre- and post-interventions. Within-group changes were assessed with related-samples t-tests and estimation of effect sizes. GMT+Lifelog was associated with significant changes, of medium to large effect size, in response inhibition (Stroop), multitasking (Strategy Application and Multiple Errand tests), DEX Intentionality and Positive Affect subscales and QOLIBRI Daily Life and Autonomy, subscales. GMT alone was associated with significant changes of overall quality of life. It was concluded that GMT+Lifelog holds promise to optimise the impact of GMT on executive dysfunction and quality of life.

  10. The GLIMS Glacier Database

    NASA Astrophysics Data System (ADS)

    Raup, B. H.; Khalsa, S. S.; Armstrong, R.

    2007-12-01

    The Global Land Ice Measurements from Space (GLIMS) project has built a geospatial and temporal database of glacier data, composed of glacier outlines and various scalar attributes. These data are being derived primarily from satellite imagery, such as from ASTER and Landsat. Each "snapshot" of a glacier is from a specific time, and the database is designed to store multiple snapshots representative of different times. We have implemented two web-based interfaces to the database; one enables exploration of the data via interactive maps (web map server), while the other allows searches based on text-field constraints. The web map server is an Open Geospatial Consortium (OGC) compliant Web Map Server (WMS) and Web Feature Server (WFS). This means that other web sites can display glacier layers from our site over the Internet, or retrieve glacier features in vector format. All components of the system are implemented using Open Source software: Linux, PostgreSQL, PostGIS (geospatial extensions to the database), MapServer (WMS and WFS), and several supporting components such as Proj.4 (a geographic projection library) and PHP. These tools are robust and provide a flexible and powerful framework for web mapping applications. As a service to the GLIMS community, the database contains metadata on all ASTER imagery acquired over glacierized terrain. Reduced-resolution of the images (browse imagery) can be viewed either as a layer in the MapServer application, or overlaid on the virtual globe within Google Earth. The interactive map application allows the user to constrain by time what data appear on the map. For example, ASTER or glacier outlines from 2002 only, or from Autumn in any year, can be displayed. The system allows users to download their selected glacier data in a choice of formats. The results of a query based on spatial selection (using a mouse) or text-field constraints can be downloaded in any of these formats: ESRI shapefiles, KML (Google Earth), MapInfo, GML (Geography Markup Language) and GMT (Generic Mapping Tools). This "clip-and-ship" function allows users to download only the data they are interested in. Our flexible web interfaces to the database, which includes various support layers (e.g. a layer to help collaborators identify satellite imagery over their region of expertise) will facilitate enhanced analysis to be undertaken on glacier systems, their distribution, and their impacts on other Earth systems.

  11. Gelatinous Marrow Transformation: A Series of 11 Cases from a Tertiary Care Centre in South India

    PubMed Central

    Das, Sreeya; Mishra, Pritinanda; Kar, Rakhee; Basu, Debdatta

    2014-01-01

    Gelatinous marrow transformation (GMT) or serous atrophy of bone marrow (BM) is a rare disease characterised by focal marrow hypoplasia, fat atrophy, and accumulation of extracellular mucopolysaccharides abundant in hyaluronic acid. This study reviews 11 cases of GMT from South India. Clinical and haematological parameters, BM aspirate, and biopsies of all patients diagnosed with GMT over a period of 7 years were studied. GMT was diagnosed in BM biopsy based on characteristic morphological appearance and was confirmed by alcian blue positive staining pattern at pH levels of 2.5 and 0.5. Eleven patients were diagnosed with GMT. All were males within the age range of 15 to 50 years. The underlying clinical diagnosis was human immunodeficiency virus positivity in 5 cases, 2 with coexistent disseminated tuberculosis, 1 with cryptococcal meningitis, and 1 with oral candidiasis; disseminated tuberculosis in 1 case; pyrexia of unknown origin in 2 cases; Hodgkin’s lymphoma in 1 case; acute lymphoblastic lymphoma with maintenance chemotherapy in 1 case; and alcoholic pancreatitis in 1 case. BM aspirates showed gelatinous metachromatic seromucinous material in 3 cases. BM biopsies were hypocellular in 7 and normocellular in 4 cases and showed focal GMT in 5 and diffuse GMT in 6 cases. Reactive changes were seen in 4 cases and haemophagocytosis in addition to GMT in 1 case. GMT is a relatively uncommon condition and an indicator of severe illness. It should be differentiated from myelonecrosis, amyloidosis, and marrow oedema. A high index of suspicion is required to diagnose this condition. PMID:25035676

  12. Gelatinous marrow transformation: a series of 11 cases from a tertiary care centre in South India.

    PubMed

    Das, Sreeya; Mishra, Pritinanda; Kar, Rakhee; Basu, Debdatta

    2014-06-01

    Gelatinous marrow transformation (GMT) or serous atrophy of bone marrow (BM) is a rare disease characterised by focal marrow hypoplasia, fat atrophy, and accumulation of extracellular mucopolysaccharides abundant in hyaluronic acid. This study reviews 11 cases of GMT from South India. Clinical and haematological parameters, BM aspirate, and biopsies of all patients diagnosed with GMT over a period of 7 years were studied. GMT was diagnosed in BM biopsy based on characteristic morphological appearance and was confirmed by alcian blue positive staining pattern at pH levels of 2.5 and 0.5. Eleven patients were diagnosed with GMT. All were males within the age range of 15 to 50 years. The underlying clinical diagnosis was human immunodeficiency virus positivity in 5 cases, 2 with coexistent disseminated tuberculosis, 1 with cryptococcal meningitis, and 1 with oral candidiasis; disseminated tuberculosis in 1 case; pyrexia of unknown origin in 2 cases; Hodgkin's lymphoma in 1 case; acute lymphoblastic lymphoma with maintenance chemotherapy in 1 case; and alcoholic pancreatitis in 1 case. BM aspirates showed gelatinous metachromatic seromucinous material in 3 cases. BM biopsies were hypocellular in 7 and normocellular in 4 cases and showed focal GMT in 5 and diffuse GMT in 6 cases. Reactive changes were seen in 4 cases and haemophagocytosis in addition to GMT in 1 case. GMT is a relatively uncommon condition and an indicator of severe illness. It should be differentiated from myelonecrosis, amyloidosis, and marrow oedema. A high index of suspicion is required to diagnose this condition.

  13. Cardioprotective effects of traditional Chinese medicine Guanmaitong on acute myocardial infarction.

    PubMed

    Wang, Xing-Hua; Li, Guang-Ping; Yang, Wan-Song; Jiao, Zhan-Quan; Liu, Hong-Mei; Ni, Yan-Ping

    2016-12-01

    Guanmaitong (GMT) is a traditional Chinese herbal compound that has been used for the treatment of coronary heart disease (CHD) and other cardiovascular diseases. However, the efficacy of GMT in treating cardiovascular diseases remains unclear. The aim of the present study was to investigate the protective mechanisms and identify the targeted proteins and signaling networks associated with the physiological activity of GMT in a rat model of acute myocardial infarction (AMI). Sprague-Dawley rats were randomly allocated into five groups: Control group (sham-operated), the model group, and small, medium, and large dosage GMT groups. The rat model of AMI was established via ligation of the coronary artery. The results indicate that GMT was able to reduce myocardial infarction size and improve the activities of tumor necrosis factor-α (TNF-α), intercellular adhesion molecule 1 (ICAM-1) and interleukin-1. Furthermore, the reduced apoptotic index of the GMT-treated cardiocytes (P<0.05 vs. model group) was in accordance with the downregulated expression of Bax and the upregulated expression of Bcl-2. In conclusion, GMT may exert a protective potential against myocardial infarction injury by inhibiting apoptosis and inflammation of cardiomyocytes, and may offer a promising adjunct treatment for CHD.

  14. Cardioprotective effects of traditional Chinese medicine Guanmaitong on acute myocardial infarction

    PubMed Central

    Wang, Xing-Hua; Li, Guang-Ping; Yang, Wan-Song; Jiao, Zhan-Quan; Liu, Hong-Mei; Ni, Yan-Ping

    2016-01-01

    Guanmaitong (GMT) is a traditional Chinese herbal compound that has been used for the treatment of coronary heart disease (CHD) and other cardiovascular diseases. However, the efficacy of GMT in treating cardiovascular diseases remains unclear. The aim of the present study was to investigate the protective mechanisms and identify the targeted proteins and signaling networks associated with the physiological activity of GMT in a rat model of acute myocardial infarction (AMI). Sprague-Dawley rats were randomly allocated into five groups: Control group (sham-operated), the model group, and small, medium, and large dosage GMT groups. The rat model of AMI was established via ligation of the coronary artery. The results indicate that GMT was able to reduce myocardial infarction size and improve the activities of tumor necrosis factor-α (TNF-α), intercellular adhesion molecule 1 (ICAM-1) and interleukin-1. Furthermore, the reduced apoptotic index of the GMT-treated cardiocytes (P<0.05 vs. model group) was in accordance with the downregulated expression of Bax and the upregulated expression of Bcl-2. In conclusion, GMT may exert a protective potential against myocardial infarction injury by inhibiting apoptosis and inflammation of cardiomyocytes, and may offer a promising adjunct treatment for CHD. PMID:28105124

  15. Transcriptomics of cortical gray matter thickness decline during normal aging

    PubMed Central

    Kochunov, P; Charlesworth, J; Winkler, A; Hong, LE; Nichols, T; Curran, JE; Sprooten, E; Jahanshad, N; Thompson, PM; Johnson, MP; Kent, JW; Landman, BA; Mitchell, B; Cole, SA; Dyer, TD; Moses, EK; Goring, HHH; Almasy, L; Duggirala, R; Olvera, RL; Glahn, DC; Blangero, J

    2013-01-01

    Introduction We performed a whole-transcriptome correlation analysis, followed by the pathway enrichment and testing of innate immune response pathways analyses to evaluate the hypothesis that transcriptional activity can predict cortical gray matter thickness (GMT) variability during normal cerebral aging Methods Transcriptome and GMT data were availabe for 379 individuals (age range=28–85) community-dwelling members of large extended Mexican-American families. Collection of transcriptome data preceded that of neuroimaging data by 17 years. Genome-wide gene transcriptome data consisted of 20,413 heritable lymphocytes-based transcripts. GMT measurements were performed from high-resolution (isotropic 800µm) T1-weighted MRI. Transcriptome-wide and pathway enrichment analysis was used to classify genes correlated with GMT. Transcripts for sixty genes from seven innate immune pathways were tested as specific predictors of GMT variability. Results Transcripts for eight genes (IGFBP3, LRRN3, CRIP2, SCD, IDS, TCF4, GATA3, HN1) passed the transcriptome-wide significance threshold. Four orthogonal factors extracted from this set predicted 31.9% of the variability in the whole-brain and between 23.4 and 35% of regional GMT measurements. Pathway enrichment analysis identified six functional categories including cellular proliferation, aggregation, differentiation, viral infection, and metabolism. The integrin signaling pathway was significantly (p<10−6) enriched with GMT. Finally, three innate immune pathways (complement signaling, toll-receptors and scavenger and immunoglobulins) were significantly associated with GMT. Conclusion Expression activity for the genes that regulate cellular proliferation, adhesion, differentiation and inflammation can explain a significant proportion of individual variability in cortical GMT. Our findings suggest that normal cerebral aging is the product of a progressive decline in regenerative capacity and increased neuroinflammation. PMID:23707588

  16. Transcriptomics of cortical gray matter thickness decline during normal aging.

    PubMed

    Kochunov, P; Charlesworth, J; Winkler, A; Hong, L E; Nichols, T E; Curran, J E; Sprooten, E; Jahanshad, N; Thompson, P M; Johnson, M P; Kent, J W; Landman, B A; Mitchell, B; Cole, S A; Dyer, T D; Moses, E K; Goring, H H H; Almasy, L; Duggirala, R; Olvera, R L; Glahn, D C; Blangero, J

    2013-11-15

    We performed a whole-transcriptome correlation analysis, followed by the pathway enrichment and testing of innate immune response pathway analyses to evaluate the hypothesis that transcriptional activity can predict cortical gray matter thickness (GMT) variability during normal cerebral aging. Transcriptome and GMT data were available for 379 individuals (age range=28-85) community-dwelling members of large extended Mexican American families. Collection of transcriptome data preceded that of neuroimaging data by 17 years. Genome-wide gene transcriptome data consisted of 20,413 heritable lymphocytes-based transcripts. GMT measurements were performed from high-resolution (isotropic 800 μm) T1-weighted MRI. Transcriptome-wide and pathway enrichment analysis was used to classify genes correlated with GMT. Transcripts for sixty genes from seven innate immune pathways were tested as specific predictors of GMT variability. Transcripts for eight genes (IGFBP3, LRRN3, CRIP2, SCD, IDS, TCF4, GATA3, and HN1) passed the transcriptome-wide significance threshold. Four orthogonal factors extracted from this set predicted 31.9% of the variability in the whole-brain and between 23.4 and 35% of regional GMT measurements. Pathway enrichment analysis identified six functional categories including cellular proliferation, aggregation, differentiation, viral infection, and metabolism. The integrin signaling pathway was significantly (p<10(-6)) enriched with GMT. Finally, three innate immune pathways (complement signaling, toll-receptors and scavenger and immunoglobulins) were significantly associated with GMT. Expression activity for the genes that regulate cellular proliferation, adhesion, differentiation and inflammation can explain a significant proportion of individual variability in cortical GMT. Our findings suggest that normal cerebral aging is the product of a progressive decline in regenerative capacity and increased neuroinflammation. Copyright © 2013 Elsevier Inc. All rights reserved.

  17. 78 FR 26616 - Pacific Fishery Management Council; Public Meeting

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-05-07

    ... Pacific Fishery Management Council's (Pacific Council) Groundfish Management Team (GMT) will hold a... will be held via webinar. To attend the GMT meeting, please reserve your seat by visiting: https://www2... reorganization of groundfish stock complexes. The GMT is tentatively scheduled to report their findings to the...

  18. 77 FR 74469 - Pacific Fishery Management Council; Public Meeting

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-12-14

    ... Pacific Fishery Management Council's (Pacific Council) Groundfish Management Team (GMT) will hold a week long working meeting, which is open to the public. The GMT will also meet with a subgroup of the Council's Scientific and Statistical Committee (SSC). DATES: The GMT meeting will be held Monday, January...

  19. 78 FR 56659 - Pacific Fishery Management Council; Public Meeting

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-09-13

    ... Pacific Fishery Management Council's (Pacific Council) Groundfish Management Team (GMT) will hold a working meeting, which is open to the public. DATES: The GMT meeting will be held Monday, September 30, 2013 from 1 p.m. until business for the day is completed. The GMT meeting will reconvene Tuesday...

  20. 77 FR 57558 - Pacific Fishery Management Council; Public Meeting

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-09-18

    ... Pacific Fishery Management Council's (Pacific Council) Groundfish Management Team (GMT) will hold a working meeting, which is open to the public. DATES: The GMT meeting will be held Tuesday, October 2, 2012 from 1 p.m. until business for the day is completed. The GMT meeting will reconvene Wednesday, October...

  1. De-mystifying earned value management for ground based astronomy projects, large and small

    NASA Astrophysics Data System (ADS)

    Norton, Timothy; Brennan, Patricia; Mueller, Mark

    2014-08-01

    The scale and complexity of today's ground based astronomy projects have justifiably required Principal Investigator's and their project teams to adopt more disciplined management processes and tools in order to achieve timely and accurate quantification of the progress and relative health of their projects. Earned Value Management (EVM) is one such tool. Developed decades ago and used extensively in the defense and construction industries, and now a requirement of NASA projects greater than $20M; EVM has gained a foothold in ground-based astronomy projects. The intent of this paper is to de-mystify EVM by discussing the fundamentals of project management, explaining how EVM fits with existing principles, and describing key concepts every project can use to implement their own EVM system. This paper also discusses pitfalls to avoid during implementation and obstacles to its success. The authors report on their organization's most recent experience implementing EVM for the GMT-Consortium Large Earth Finder (G-CLEF) project. G-CLEF is a fiber-fed, optical echelle spectrograph that has been selected as a first light instrument for the Giant Magellan Telescope (GMT), planned for construction at the Las Campanas Observatory in Chile's Atacama Desert region.

  2. Prominent gelatinous bone marrow transformation presenting prior to myelodysplastic syndrome: a case report with review of the literature.

    PubMed

    Nakanishi, Ryota; Ishida, Mitsuaki; Hodohara, Keiko; Yoshida, Takashi; Yoshii, Miyuki; Okuno, Hiroko; Horinouchi, Akiko; Iwai, Muneo; Yoshida, Keiko; Kagotani, Akiko; Okabe, Hidetoshi

    2013-01-01

    Gelatinous bone marrow transformation (GMT) is a rare disorder characterized by the presence of fat cell atrophy, loss of hematopoietic cells, and deposition of extracellular gelatinous materials. GMT is not a specific disease, but is strongly associated with malnutrition and drugs. Albeit extremely rare, GMT has been reported in patients with myeloproliferative disorders. Herein, we report the second documented case of hypoplastic myelodysplastic syndrome (MDS) accompanying GMT. A 73-year-old Japanese male with excellent nutrition status and no history of alcohol or drug intake was detected with pancytopenia. The initial bone marrow aspirate specimen reveled hypocellular marrow without dysplastic signs in the myeloid cells. Bone marrow biopsy demonstrated hypocellular bone marrow with prominent GMT. He received blood transfusions, however, pancytopenia continued to progress. The second bone marrow aspirate specimen showed dysplastic changes, such as pseudo-Pelger-Huët cells, hypogranular or agranular granulocytes, and megakaryocytes with multiple small nuclei. Cytogenetic study demonstrated deletion of chromosome 7. Therefore, an ultimate diagnosis of hypoplastic MDS accompanying GMT was made. Only a limited number of cases of myeloproliferative disorders with GMT have been reported. Our analysis of these cases revealed that chromosome 7 abnormality is frequently observed in this condition. Moreover, findings from the current case suggested that myeloproliferative disorders including MDS must be included in the differential diagnostic considerations of GMT patients, who have no history of malnutrition or drugs, and careful examination of the bone marrow smear specimen and cytogenetic analysis are necessary for early detection of underlying myeloproliferative disorders.

  3. 75 FR 33245 - Pacific Fishery Management Council; Public Meeting

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-06-11

    ... Pacific Fishery Management Council's (Council) Groundfish Management Team (GMT) will hold a working meeting, which is open to the public. DATES: The GMT meeting will be held Monday, June 28, 2010 from 1 p.m. until business for the day is completed. The GMT meeting will reconvene Tuesday, June 29 through...

  4. Direct In Vivo Reprogramming with Sendai Virus Vectors Improves Cardiac Function after Myocardial Infarction.

    PubMed

    Miyamoto, Kazutaka; Akiyama, Mizuha; Tamura, Fumiya; Isomi, Mari; Yamakawa, Hiroyuki; Sadahiro, Taketaro; Muraoka, Naoto; Kojima, Hidenori; Haginiwa, Sho; Kurotsu, Shota; Tani, Hidenori; Wang, Li; Qian, Li; Inoue, Makoto; Ide, Yoshinori; Kurokawa, Junko; Yamamoto, Tsunehisa; Seki, Tomohisa; Aeba, Ryo; Yamagishi, Hiroyuki; Fukuda, Keiichi; Ieda, Masaki

    2018-01-04

    Direct cardiac reprogramming holds great promise for regenerative medicine. We previously generated directly reprogrammed induced cardiomyocyte-like cells (iCMs) by overexpression of Gata4, Mef2c, and Tbx5 (GMT) using retrovirus vectors. However, integrating vectors pose risks associated with insertional mutagenesis and disruption of gene expression and are inefficient. Here, we show that Sendai virus (SeV) vectors expressing cardiac reprogramming factors efficiently and rapidly reprogram both mouse and human fibroblasts into integration-free iCMs via robust transgene expression. SeV-GMT generated 100-fold more beating iCMs than retroviral-GMT and shortened the duration to induce beating cells from 30 to 10 days in mouse fibroblasts. In vivo lineage tracing revealed that the gene transfer of SeV-GMT was more efficient than retroviral-GMT in reprogramming resident cardiac fibroblasts into iCMs in mouse infarct hearts. Moreover, SeV-GMT improved cardiac function and reduced fibrosis after myocardial infarction. Thus, efficient, non-integrating SeV vectors may serve as a powerful system for cardiac regeneration. Copyright © 2017 Elsevier Inc. All rights reserved.

  5. Overview of the University of Pittsburgh/amfAR Training Program in HIV Prevention Research for MSM and Male-to-Female Transgender Populations in Low- and Middle-Income Countries.

    PubMed

    Stall, Ron; Egan, James E; Kinsky, Suzanne; Coulter, Robert W S; Friedman, M Reuel; Matthews, Derrick D; Klindera, Kent; Cowing, Michael

    2016-12-01

    Gay men, other men who have sex with men and transgender (GMT) populations suffer a disproportionate burden of HIV disease around the globe, which is directly attributable to the virulently homophobic environments in which many GMT people live. In addition to the direct effects of homophobia on GMT individuals, the ongoing marginalization of GMT people has meant that there is limited social capital on which effective HIV prevention and care programs can be built in many low- and middle-income countries (LMIC). Thus, meaningful responses meant to address the dire situation of GMT populations in LMIC settings must include a combination of bold and innovative approaches if efforts to end the epidemic are to have any chance of making a real difference. The HIV Scholars Program at the University of Pittsburgh's Center for LGBT Health Research is a prime example of a creative and dynamic approach to raising the expertise needed within GMT populations to respond to the global HIV/AIDS pandemic.

  6. In situ reprogramming to transdifferentiate fibroblasts into cardiomyocytes using adenoviral vectors: Implications for clinical myocardial regeneration.

    PubMed

    Mathison, Megumi; Singh, Vivek P; Chiuchiolo, Maria J; Sanagasetti, Deepthi; Mao, Yun; Patel, Vivekkumar B; Yang, Jianchang; Kaminsky, Stephen M; Crystal, Ronald G; Rosengart, Todd K

    2017-02-01

    The reprogramming of cardiac fibroblasts into induced cardiomyocyte-like cells improves ventricular function in myocardial infarction models. Only integrating persistent expression vectors have thus far been used to induce reprogramming, potentially limiting its clinical applicability. We therefore tested the reprogramming potential of nonintegrating, acute expression adenoviral (Ad) vectors. Ad or lentivirus vectors encoding Gata4 (G), Mef2c (M), and Tbx5 (T) were validated in vitro. Sprague-Dawley rats then underwent coronary ligation and Ad-mediated administration of vascular endothelial growth factor to generate infarct prevascularization. Three weeks later, animals received Ad or lentivirus encoding G, M, or T (AdGMT or LentiGMT) or an equivalent dose of a null vector (n = 11, 10, and 10, respectively). Outcomes were analyzed by echocardiography, magnetic resonance imaging, and histology. Ad and lentivirus vectors provided equivalent G, M, and T expression in vitro. AdGMT and LentiGMT both likewise induced expression of the cardiomyocyte marker cardiac troponin T in approximately 6% of cardiac fibroblasts versus <1% cardiac troponin T expression in AdNull (adenoviral vector that does not encode a transgene)-treated cells. Infarcted myocardium that had been treated with AdGMT likewise demonstrated greater density of cells expressing the cardiomyocyte marker beta myosin heavy chain 7 compared with AdNull-treated animals. Echocardiography demonstrated that AdGMT and LentiGMT both increased ejection fraction compared with AdNull (AdGMT: 21% ± 3%, LentiGMT: 14% ± 5%, AdNull: -0.4% ± 2%; P < .05). Ad vectors are at least as effective as lentiviral vectors in inducing cardiac fibroblast transdifferentiation into induced cardiomyocyte-like cells and improving cardiac function in postinfarct rat hearts. Short-term expression Ad vectors may represent an important means to induce cardiac cellular reprogramming in humans. Copyright © 2016 The American Association for Thoracic Surgery. Published by Elsevier Inc. All rights reserved.

  7. Chemical Enhancement of In Vitro and In Vivo Direct Cardiac Reprogramming.

    PubMed

    Mohamed, Tamer M A; Stone, Nicole R; Berry, Emily C; Radzinsky, Ethan; Huang, Yu; Pratt, Karishma; Ang, Yen-Sin; Yu, Pengzhi; Wang, Haixia; Tang, Shibing; Magnitsky, Sergey; Ding, Sheng; Ivey, Kathryn N; Srivastava, Deepak

    2017-03-07

    Reprogramming of cardiac fibroblasts into induced cardiomyocyte-like cells in situ represents a promising strategy for cardiac regeneration. A combination of 3 cardiac transcription factors, Gata4, Mef2c, and Tbx5 (GMT), can convert fibroblasts into induced cardiomyocyte-like cells, albeit with low efficiency in vitro. We screened 5500 compounds in primary cardiac fibroblasts to identify the pathways that can be modulated to enhance cardiomyocyte reprogramming. We found that a combination of the transforming growth factor-β inhibitor SB431542 and the WNT inhibitor XAV939 increased reprogramming efficiency 8-fold when added to GMT-overexpressing cardiac fibroblasts. The small molecules also enhanced the speed and quality of cell conversion; we observed beating cells as early as 1 week after reprogramming compared with 6 to 8 weeks with GMT alone. In vivo, mice exposed to GMT, SB431542, and XAV939 for 2 weeks after myocardial infarction showed significantly improved reprogramming and cardiac function compared with those exposed to only GMT. Human cardiac reprogramming was similarly enhanced on transforming growth factor-β and WNT inhibition and was achieved most efficiently with GMT plus myocardin. Transforming growth factor-β and WNT inhibitors jointly enhance GMT-induced direct cardiac reprogramming from cardiac fibroblasts in vitro and in vivo and provide a more robust platform for cardiac regeneration. © 2016 American Heart Association, Inc.

  8. Chemical Enhancement of In Vitro and In Vivo Direct Cardiac Reprogramming

    PubMed Central

    Mohamed, Tamer M. A.; Stone, Nicole R.; Berry, Emily C.; Radzinsky, Ethan; Huang, Yu; Pratt, Karishma; Ang, Yen-Sin; Yu, Pengzhi; Wang, Haixia; Tang, Shibing; Magnitsky, Sergey; Ding, Sheng; Ivey, Kathryn N.; Srivastava, Deepak

    2017-01-01

    Background Reprogramming of cardiac fibroblasts into induced cardiomyocyte-like cells (iCMs) in situ represents a promising strategy for cardiac regeneration. A combination of three cardiac transcription factors, Gata4, Mef2c and Tbx5 (GMT), can convert fibroblasts into iCMs, albeit with low efficiency in vitro. Methods We screened 5,500 compounds in primary cardiac fibroblasts to identify the pathways that can be modulated to enhance cardiomyocyte reprogramming. Results We found that a combination of the transforming growth factor (TGF)-β inhibitor SB431542 and the WNT inhibitor XAV939 increased reprogramming efficiency eight-fold when added to GMT-overexpressing cardiac fibroblasts. The small-molecules also enhanced the speed and the quality of cell conversion, as we observed beating cells as early as 1 week after reprogramming compared to 6–8 weeks with GMT alone. In vivo, mice exposed to GMT, SB431542, and XAV939 for 2 weeks after myocardial infarction showed significantly improved reprogramming and cardiac function compared to those exposed to only GMT. Human cardiac reprogramming was similarly enhanced upon TGF-β and WNT inhibition and was achieved most efficiently with GMT plus Myocardin. Conclusions Thus, TGF-β and WNT inhibitors jointly enhance GMT-induced direct cardiac reprogramming from cardiac fibroblasts in vitro and in vivo and provide a more robust platform for cardiac regeneration. PMID:27834668

  9. Education Partnerships in Teacher Training: McDonald Observatory and the Giant Magellan Telescope Organization.

    NASA Astrophysics Data System (ADS)

    Finkelstein, Keely; Preston, Sandra Lee; Hemenway, Mary; Malasarn, Davin; Wetzel, Marc

    2015-08-01

    McDonald Observatory in remote, west Texas has a long history of providing K-12 teacher professional development (PD) through workshops at the observatory. Recently, we have started a new teacher PD program in partnership with the Giant Magellan Telescope Organization (GMTO) to provide teacher training and establish a network of teachers and students engaged in the Giant Magellan Telescope. The GMT Teacher workshop has been offered to 30 teachers during the summers of 2014 and 2015; continued engagement has been offered to the teachers through online resources, networking, participation in other teacher PD opportunities and conferences. Evaluation has been conducted using several metrics immediately post workshops, and long term followup evaluation methods. At the close of the 2014 workshop teachers reported learning about the telescopes and nighttime observing, and the promise of the GMT. Consensus statements at the close of the workshop also spoke about passion for and appreciation of astronomy. The major source of recommendation during the year one workshop was to provide more detailed information or activities on the GMT during the workshops. While this does prove challenging to incorporate a full slate of activities on the GMT before the telescope is even built, we are currently working to produce more take-home materials which are GMT specific, continue to make general connections to telescope technology and science that are applicable to the GMT with the teachers. McDonald Observatory and GMTO will continue to partner to offer teacher PD related to the GMT, and increase the network of teachers and students engaged in the GMT, up and through the beginning of its operations in 2020. We will present the current highlights, evaulation outcome results, and future outlook for this program and collaboration.

  10. [Nephrotoxicity of Aristolochia manshuriensis and aristolochic acids in mice].

    PubMed

    Ding, Xiao-shuang; Liang, Ai-hua; Wang, Jin-hua; Xiao, Yong-qing; Wu, Zi-lun; Li, Chun-ying; Li, Li; He, Rong; Hui, Lian-qiang; Liu, Bao-yan

    2005-07-01

    The acute toxic effects of Aristolochia manshuriensis (GMT) and the total aristolochic acids (TA) were compared in mice with aristolochic acid A (AA) as the dose standard. The dose relationship of the renal toxicity induced by Aristolochia manshuriensis was determined. A single dose of GMT extract or TA was given intragastrically to mice at different doses. LD50 values, the blood levels of BUN, Cr and ALT were measured. A histomorphological study was also performed in livers and kidneys of mice. LD50 value of GMT extract was 4.4 g x kg(-1) which was equivalent to 40 mg x kg(-1) as calculated by the content of AA in GMT extract, and this value was comparable with LD50 obtained from TA given intragastrically in mice (equivalent to 33 mg x kg(-1) of AA for male and 37 mg x kg(-1) for female). GMT extract caused a significant increase in blood BUN and Cr and an obvious morphological change in kidney in a dose-dependent manner at doses of AA 4.5 mg x kg(-1) and above. Liver damage, characterized by both an increase in blood level of AST and histomorphological change, was observed at doses of AA 25 mg x kg(-1) and above. All changes were in proportion to the doses of AA. GMT causes both renal and liver toxicity. The dose leading to nephrotoxicity is much lower than that inducing hepatatoxicity. Aristolochic acids existed in GMT are the main toxic components to cause renal toxicity which is a crucial cause to result in death. The lethality and nephrotoxicity of GMT is in proportion to the doses of AA.

  11. Induction of cardiomyocyte-like cells in infarct hearts by gene transfer of Gata4, Mef2c, and Tbx5.

    PubMed

    Inagawa, Kohei; Miyamoto, Kazutaka; Yamakawa, Hiroyuki; Muraoka, Naoto; Sadahiro, Taketaro; Umei, Tomohiko; Wada, Rie; Katsumata, Yoshinori; Kaneda, Ruri; Nakade, Koji; Kurihara, Chitose; Obata, Yuichi; Miyake, Koichi; Fukuda, Keiichi; Ieda, Masaki

    2012-10-12

    After myocardial infarction (MI), massive cell death in the myocardium initiates fibrosis and scar formation, leading to heart failure. We recently found that a combination of 3 cardiac transcription factors, Gata4, Mef2c, and Tbx5 (GMT), reprograms fibroblasts directly into functional cardiomyocytes in vitro. To investigate whether viral gene transfer of GMT into infarcted hearts induces cardiomyocyte generation. Coronary artery ligation was used to generate MI in the mouse. In vitro transduction of GMT retrovirus converted cardiac fibroblasts from the infarct region into cardiomyocyte-like cells with cardiac-specific gene expression and sarcomeric structures. Injection of the green fluorescent protein (GFP) retrovirus into mouse hearts, immediately after MI, infected only proliferating noncardiomyocytes, mainly fibroblasts, in the infarct region. The GFP expression diminished after 2 weeks in immunocompetent mice but remained stable for 3 months in immunosuppressed mice, in which cardiac induction did not occur. In contrast, injection of GMT retrovirus into α-myosin heavy chain (αMHC)-GFP transgenic mouse hearts induced the expression of αMHC-GFP, a marker of cardiomyocytes, in 3% of virus-infected cells after 1 week. A pooled GMT injection into the immunosuppressed mouse hearts induced cardiac marker expression in retrovirus-infected cells within 2 weeks, although few cells showed striated muscle structures. To transduce GMT efficiently in vivo, we generated a polycistronic retrovirus expressing GMT separated by 2A "self-cleaving" peptides (3F2A). The 3F2A-induced cardiomyocyte-like cells in fibrotic tissue expressed sarcomeric α-actinin and cardiac troponin T and had clear cross striations. Quantitative RT-PCR also demonstrated that FACS-sorted 3F2A-transduced cells expressed cardiac-specific genes. GMT gene transfer induced cardiomyocyte-like cells in infarcted hearts.

  12. Epistatic effect of plasminogen activator inhibitor 1 and beta-fibrinogen genes on risk of glomerular microthrombosis in lupus nephritis: interaction with environmental/clinical factors.

    PubMed

    Gong, Rujun; Liu, Zhihong; Li, Leishi

    2007-05-01

    Glomerular microthrombosis (GMT) is not uncommon in lupus nephritis and has been associated with active renal injury and progressive kidney destruction. We undertook this study to determine whether genetic variations of hemostasis factors, such as plasminogen activator inhibitor 1 (PAI-1) and fibrinogen, affect the risk of GMT. A cross-sectional cohort of 101 lupus nephritis patients with or without GMT was genotyped for PAI-1 -675 4G/5G and beta-fibrinogen (FGB) -455 G/A gene polymorphisms and analyzed. PAI-1 4G/4G homozygotes and FGB A allele carriers were both at increased risk for GMT. When the data were stratified for both gene polymorphisms, an epistatic effect was detected. The PAI-1 4G/4G genotype was found to predispose to GMT not equally in all lupus nephritis patients, but only in FGB A allele carriers. Likewise, the association between the FGB A allele and GMT was restricted to lupus nephritis patients homozygous for the PAI-1 4G allele. This epistatic effect was revalidated by the multifactor dimensionality reduction (MDR) analysis and further assessed by incorporating a variety of environmental and clinical factors into the MDR analysis. The most parsimonious model that had a cross-validation consistency of 100% included joint effects of PAI-1 and FGB gene polymorphisms and anticardiolipin antibody (aCL) status and yielded the best prediction of GMT, with 66.6% accuracy. Our findings suggest that risk of GMT in lupus nephritis is attributable, at least in part, to an epistatic effect of PAI-1 and FGB genes, likely via an interaction with environmental/clinical factors, such as aCL.

  13. A Geo-referenced 3D model of the Juan de Fuca Slab and associated seismicity

    USGS Publications Warehouse

    Blair, J.L.; McCrory, P.A.; Oppenheimer, D.H.; Waldhauser, F.

    2011-01-01

    We present a Geographic Information System (GIS) of a new 3-dimensional (3D) model of the subducted Juan de Fuca Plate beneath western North America and associated seismicity of the Cascadia subduction system. The geo-referenced 3D model was constructed from weighted control points that integrate depth information from hypocenter locations and regional seismic velocity studies. We used the 3D model to differentiate earthquakes that occur above the Juan de Fuca Plate surface from earthquakes that occur below the plate surface. This GIS project of the Cascadia subduction system supersedes the one previously published by McCrory and others (2006). Our new slab model updates the model with new constraints. The most significant updates to the model include: (1) weighted control points to incorporate spatial uncertainty, (2) an additional gridded slab surface based on the Generic Mapping Tools (GMT) Surface program which constructs surfaces based on splines in tension (see expanded description below), (3) double-differenced hypocenter locations in northern California to better constrain slab location there, and (4) revised slab shape based on new hypocenter profiles that incorporate routine depth uncertainties as well as data from new seismic-reflection and seismic-refraction studies. We also provide a 3D fly-through animation of the model for use as a visualization tool.

  14. Building information modeling (BIM) approach to the GMT Project

    NASA Astrophysics Data System (ADS)

    Teran, Jose; Sheehan, Michael; Neff, Daniel H.; Adriaanse, David; Grigel, Eric; Farahani, Arash

    2014-07-01

    The Giant Magellan Telescope (GMT), one of several next generation Extremely Large Telescopes (ELTs), is a 25.4 meter diameter altitude over azimuth design set to be built at the summit of Cerro Campánas at the Las Campánas Observatory in Chile. The paper describes the use of Building Information Modeling (BIM) for the GMT project.

  15. Comparison of HHV-6 antibody titers in West Africa and the Caribbean.

    PubMed

    Cleghorn, F R; Maybank, K A; Jack, N; Pate, E; Mingle, J; Levine, P H; Manns, A

    1995-11-01

    Human herpesvirus-6 (HHV-6) infection seems to be ubiquitous early in life, but antibody responses vary by geographic area. We compared HHV-6 antibody titer in 123 West African and 122 Caribbean serum samples. A quantitative immunofluorescence assay (IFA) using antigens derived from an HSB-2 cell line was used to test for IgG HHV-6 (GS strain) antibodies. The prevalence of HHV-6 antibodies was high (98%) in both sites. African samples had a significantly higher geometric mean titer (GMT: 697) than did Caribbean samples (GMT: 99). There was no difference between males (GMT: 260) and females (GMT: 270) overall. Children up to and including 9 years old had significantly higher titers (GMT: 483) than did all others (GMT: 237), and female children tended to have higher titers than did male children. In both areas there was a trend towards highest titer at younger age, followed by a decrease in titer during adulthood and middle age, and a secondary rise in titer in the oldest age group. Environmental and host factors may explain these geographic differences in antibody responses between two groups of African origin.

  16. The application of Goal Management Training to aspects of financial management in individuals with traumatic brain injury.

    PubMed

    Grant, Michele; Ponsford, Jennie; Bennett, Pauleen C

    2012-01-01

    Executive functions encompass planning, problem-solving and self-monitoring abilities, abilities that are implicit in goal attainment and often compromised in individuals with traumatic brain injury (TBI). Goal Management Training (GMT) is a theoretically based rehabilitation protocol that was developed to improve goal-directed behaviour. To date, there is evidence to support the efficacy of GMT in healthy older adults and in one previously high functioning individual with acquired brain injury. However, there is no evidence that, in individuals with TBI and severe cognitive impairments, GMT leads to sustained improvement on everyday tasks requiring planning and organisation. The current study was conducted to explore the efficacy of GMT in helping individuals with TBI to improve aspects of their day-to-day financial management. Four participants with severe TBI completed a modified GMT module. Outcomes were assessed using Goal Attainment Scaling. Five control participants were also recruited as a comparison group for the Multiple Errands Task which was used to measure generalisation. The outcomes in each case were variable. Overall the results showed that the structured GMT intervention assisted some TBI individuals to improve their performance on financial management tasks, with evidence of generalisation in some cases.

  17. Voice outcomes following the gray minithyrotomy.

    PubMed

    Mallur, Pavan S; Gartner-Schmidt, Jacqueline; Rosen, Clark A

    2012-07-01

    Most practitioners have limited treatment options for vocal fold scar and sulcus vocalis. The Gray minithyrotomy (GMT) is a surgical procedure for the treatment of these conditions, although limited objective data exist regarding voice outcomes. This study compares the quantified subjective and visual perceptual outcomes following GMT for the treatment of vocal fold scar and sulcus vocalis. We performed a retrospective review of patients who underwent GMT in a single institution. Patient-reported satisfaction, Voice Handicap Index-10 scores, results of video perceptual analysis, and complications were recorded. Sixteen patients underwent GMT for phonotraumatic or postoperative scar (11), radiation-induced scar (3), or sulcus vocalis (2). Seven underwent bilateral operations. Follow-up data were available for 12 patients. Eight patients had 2 or more failed surgical interventions before GMT. Seven of the 13 procedures resulted in a self-reported improvement. Although the mean preoperative Voice Handicap Index-10 score (30.6) across all patients did not decrease after the operation, 6 of the 13 GMT procedures resulted in improvement (mean decrease, 7.5). Complications, encountered in 5 patients, included ecchymosis, neck abscess, tongue numbness, wound dehiscence, and aspiration pneumonia. The GMT is a viable treatment for severe vocal fold scar and sulcus vocalis. Our results show improvement in half of a cohort that was marked by previous failures at improving voice. These results point to the recalcitrant nature of voice difficulties in treating vocal fold scar and sulcus, and may properly guide clinicians and patients in their expectations following this infrequently used technique.

  18. Large 0/12 GMT Differences of US Vaisala RS80 Observations

    NASA Technical Reports Server (NTRS)

    Redder, Chris; Atlas, Robert (Technical Monitor)

    2002-01-01

    The daily differences between the temperatures and heights taken at 0 GMT and 12 GMT by Vaisala RS80 rawinsondes have been calculated. The observations were obtained during selected months from 1998 - 2002 over North America, Europe and Australia. The daily differences are defined by the formula, Delta T = Delta T(sub 0) - 0.5(T(sub -12) - T(sub +12)) where AT is the 0/12 GMT difference, T(sub 0) is the 0 GMT observation and T(sub -12) and T(sub +12) are the 12 GMT observations taken just prior and after the 0 GMT synoptic time. If T(sub +12) is missing then Delta T = T(sub 0) - T(sub -12). A similar expression is used if T(sub -12) is missing. Monthly averages of the increments at each station that launch RS80 rawinsondes are then calculated. The results show positive systematic differences in the stratosphere with values as high as 5 K and 150 m at 10 hPa over the central United States. The values remain generally positive and gradually decrease as the levels descend into the upper troposphere but are still significant. In addition, the maximum at each level is just westward of 90 W at the highest levels and just eastward in the troposphere with smaller values along both coasts. In Canada as well as in Europe and Australia the differences are much smaller with no systematic patterns similar to those that exist over the contiguous United States. Time-series plots of the temperatures and heights at select stations in the United States show that the observed values taken at 0 GMT are consistently higher than those at 12 GMT. Over Canada the differences become much less apparent and some cases non-existent. The observations were obtained through National Centers for Environmental Prediction (NCEP) but were checked with data from other sources to verify that no modifications were made other than those at the stations. Since the data from outside the the United States exhibit no large systematic differences, the preliminary conclusion is that the large differences are artificial and probably originate from the post-processing software at the observing stations.

  19. Open Technologies at Athabasca University's Geospace Observatories

    NASA Astrophysics Data System (ADS)

    Connors, M. G.; Schofield, I. S.

    2012-12-01

    Athabasca University Geophysical Observatories feature two auroral observation sites situated in the subauroral zone of western Canada, separated by approximately 25 km. These sites are both on high-speed internet and ideal for observing phenomena detectable from this latitude, which include noctilucent clouds, meteors, and magnetic and optical aspects of the aurora. General aspects of use of Linux in observatory management are described, with emphasis on recent imaging projects involving control of high resolution digital SLR cameras at low cadence, and inexpensive white light analog video cameras at 30 Hz. Linux shell scripts are extensively used, with image capture controlled by gphoto2, the ivtv-utils package, x264 video coding library, and ffmpeg. Imagemagick allows processing of images in an automated fashion. Image archives and movies are created and can be correlated with magnetic data. Much of the magnetic data stream also uses GMT (Generic Mapping Tools) within shell scripts for display. Additionally, SPASE metadata are generated for most of the magnetic data, thus allowing users of our AUTUMN magnetic data repository to perform SPASE queries on the dataset. Visualization products from our twin observatories will be presented.

  20. Comparing the model-simulated global warming signal to observations using empirical estimates of unforced noise.

    PubMed

    Brown, Patrick T; Li, Wenhong; Cordero, Eugene C; Mauget, Steven A

    2015-04-21

    The comparison of observed global mean surface air temperature (GMT) change to the mean change simulated by climate models has received much public and scientific attention. For a given global warming signal produced by a climate model ensemble, there exists an envelope of GMT values representing the range of possible unforced states of the climate system (the Envelope of Unforced Noise; EUN). Typically, the EUN is derived from climate models themselves, but climate models might not accurately simulate the correct characteristics of unforced GMT variability. Here, we simulate a new, empirical, EUN that is based on instrumental and reconstructed surface temperature records. We compare the forced GMT signal produced by climate models to observations while noting the range of GMT values provided by the empirical EUN. We find that the empirical EUN is wide enough so that the interdecadal variability in the rate of global warming over the 20(th) century does not necessarily require corresponding variability in the rate-of-increase of the forced signal. The empirical EUN also indicates that the reduced GMT warming over the past decade or so is still consistent with a middle emission scenario's forced signal, but is likely inconsistent with the steepest emission scenario's forced signal.

  1. Comparing the model-simulated global warming signal to observations using empirical estimates of unforced noise

    PubMed Central

    Brown, Patrick T.; Li, Wenhong; Cordero, Eugene C.; Mauget, Steven A.

    2015-01-01

    The comparison of observed global mean surface air temperature (GMT) change to the mean change simulated by climate models has received much public and scientific attention. For a given global warming signal produced by a climate model ensemble, there exists an envelope of GMT values representing the range of possible unforced states of the climate system (the Envelope of Unforced Noise; EUN). Typically, the EUN is derived from climate models themselves, but climate models might not accurately simulate the correct characteristics of unforced GMT variability. Here, we simulate a new, empirical, EUN that is based on instrumental and reconstructed surface temperature records. We compare the forced GMT signal produced by climate models to observations while noting the range of GMT values provided by the empirical EUN. We find that the empirical EUN is wide enough so that the interdecadal variability in the rate of global warming over the 20th century does not necessarily require corresponding variability in the rate-of-increase of the forced signal. The empirical EUN also indicates that the reduced GMT warming over the past decade or so is still consistent with a middle emission scenario's forced signal, but is likely inconsistent with the steepest emission scenario's forced signal. PMID:25898351

  2. Rehabilitation of executive functioning in patients with frontal lobe brain damage with goal management training.

    PubMed

    Levine, Brian; Schweizer, Tom A; O'Connor, Charlene; Turner, Gary; Gillingham, Susan; Stuss, Donald T; Manly, Tom; Robertson, Ian H

    2011-01-01

    Executive functioning deficits due to brain disease affecting frontal lobe functions cause significant real-life disability, yet solid evidence in support of executive functioning interventions is lacking. Goal Management Training (GMT), an executive functioning intervention that draws upon theories concerning goal processing and sustained attention, has received empirical support in studies of patients with traumatic brain injury, normal aging, and case studies. GMT promotes a mindful approach to complex real-life tasks that pose problems for patients with executive functioning deficits, with a main goal of periodically stopping ongoing behavior to monitor and adjust goals. In this controlled trial, an expanded version of GMT was compared to an alternative intervention, Brain Health Workshop that was matched to GMT on non-specific characteristics that can affect intervention outcome. Participants included 19 individuals in the chronic phase of recovery from brain disease (predominantly stroke) affecting frontal lobe function. Outcome data indicated specific effects of GMT on the Sustained Attention to Response Task as well as the Tower Test, a visuospatial problem-solving measure that reflected far transfer of training effects. There were no significant effects on self-report questionnaires, likely owing to the complexity of these measures in this heterogeneous patient sample. Overall, these data support the efficacy of GMT in the rehabilitation of executive functioning deficits.

  3. Goal management training of executive functions in patients with spina bifida: a randomized controlled trial.

    PubMed

    Stubberud, Jan; Langenbahn, Donna; Levine, Brian; Stanghelle, Johan; Schanke, Anne-Kristine

    2013-07-01

    Executive dysfunction causes significant real-life disability for patients with spina bifida (SB). However, no previous research has been directed toward the amelioration of executive functioning deficits amongst persons with SB. Goal Management Training (GMT) is a compensatory cognitive rehabilitation approach, addressing underlying deficits in sustained attention to improve executive function. GMT has received empirical support in studies of other patient groups. The purpose of the present study was to determine the efficacy of GMT in treating subjects with SB, using inpatient intervention periods. We hypothesized post-intervention changes in scores on neuropsychological measures to reflect improved attentional control, including sustained attention and inhibitory control. Thirty-eight adult subjects with SB were included in this randomized controlled trial. Inclusion was based upon the presence of executive functioning complaints. Experimental subjects (n = 24) received 21 hr of GMT, with efficacy of GMT being compared to results of subjects in a wait-list condition (n = 14). All subjects were assessed at baseline, post-intervention, and at 6-month follow-up. Findings indicated superior effects of GMT on domain-specific neuropsychological measures and on a functional "real-life" measure, all lasting at least 6 months post-treatment. These results show that deficits in executive functioning can be ameliorated in patients with congenital brain dysfunction.

  4. MiR-133 promotes cardiac reprogramming by directly repressing Snai1 and silencing fibroblast signatures.

    PubMed

    Muraoka, Naoto; Yamakawa, Hiroyuki; Miyamoto, Kazutaka; Sadahiro, Taketaro; Umei, Tomohiko; Isomi, Mari; Nakashima, Hanae; Akiyama, Mizuha; Wada, Rie; Inagawa, Kohei; Nishiyama, Takahiko; Kaneda, Ruri; Fukuda, Toru; Takeda, Shu; Tohyama, Shugo; Hashimoto, Hisayuki; Kawamura, Yoshifumi; Goshima, Naoki; Aeba, Ryo; Yamagishi, Hiroyuki; Fukuda, Keiichi; Ieda, Masaki

    2014-07-17

    Fibroblasts can be directly reprogrammed into cardiomyocyte-like cells (iCMs) by overexpression of cardiac transcription factors or microRNAs. However, induction of functional cardiomyocytes is inefficient, and molecular mechanisms of direct reprogramming remain undefined. Here, we demonstrate that addition of miR-133a (miR-133) to Gata4, Mef2c, and Tbx5 (GMT) or GMT plus Mesp1 and Myocd improved cardiac reprogramming from mouse or human fibroblasts by directly repressing Snai1, a master regulator of epithelial-to-mesenchymal transition. MiR-133 overexpression with GMT generated sevenfold more beating iCMs from mouse embryonic fibroblasts and shortened the duration to induce beating cells from 30 to 10 days, compared to GMT alone. Snai1 knockdown suppressed fibroblast genes, upregulated cardiac gene expression, and induced more contracting iCMs with GMT transduction, recapitulating the effects of miR-133 overexpression. In contrast, overexpression of Snai1 in GMT/miR-133-transduced cells maintained fibroblast signatures and inhibited generation of beating iCMs. MiR-133-mediated Snai1 repression was also critical for cardiac reprogramming in adult mouse and human cardiac fibroblasts. Thus, silencing fibroblast signatures, mediated by miR-133/Snai1, is a key molecular roadblock during cardiac reprogramming. © 2014 The Authors.

  5. MiR-133 promotes cardiac reprogramming by directly repressing Snai1 and silencing fibroblast signatures

    PubMed Central

    Muraoka, Naoto; Yamakawa, Hiroyuki; Miyamoto, Kazutaka; Sadahiro, Taketaro; Umei, Tomohiko; Isomi, Mari; Nakashima, Hanae; Akiyama, Mizuha; Wada, Rie; Inagawa, Kohei; Nishiyama, Takahiko; Kaneda, Ruri; Fukuda, Toru; Takeda, Shu; Tohyama, Shugo; Hashimoto, Hisayuki; Kawamura, Yoshifumi; Goshima, Naoki; Aeba, Ryo; Yamagishi, Hiroyuki; Fukuda, Keiichi; Ieda, Masaki

    2014-01-01

    Fibroblasts can be directly reprogrammed into cardiomyocyte-like cells (iCMs) by overexpression of cardiac transcription factors or microRNAs. However, induction of functional cardiomyocytes is inefficient, and molecular mechanisms of direct reprogramming remain undefined. Here, we demonstrate that addition of miR-133a (miR-133) to Gata4, Mef2c, and Tbx5 (GMT) or GMT plus Mesp1 and Myocd improved cardiac reprogramming from mouse or human fibroblasts by directly repressing Snai1, a master regulator of epithelial-to-mesenchymal transition. MiR-133 overexpression with GMT generated sevenfold more beating iCMs from mouse embryonic fibroblasts and shortened the duration to induce beating cells from 30 to 10 days, compared to GMT alone. Snai1 knockdown suppressed fibroblast genes, upregulated cardiac gene expression, and induced more contracting iCMs with GMT transduction, recapitulating the effects of miR-133 overexpression. In contrast, overexpression of Snai1 in GMT/miR-133-transduced cells maintained fibroblast signatures and inhibited generation of beating iCMs. MiR-133-mediated Snai1 repression was also critical for cardiac reprogramming in adult mouse and human cardiac fibroblasts. Thus, silencing fibroblast signatures, mediated by miR-133/Snai1, is a key molecular roadblock during cardiac reprogramming. PMID:24920580

  6. Currie and Krikalev remove launch restraint bolts in FGB/Zarya module

    NASA Image and Video Library

    1998-12-11

    S88-E-5085 (12-11-98) --- Nancy J. Currie and Sergei Krikalev use rechargeable power tools to tighten and loosen nuts onboard the Russian-built Zarya module which they entered on Flight Day 8. The two are mission specialists, with Krikalev representing the Russian Space Agency (RSA). The photo was taken with an electronic still camera (ESC) at 05:28:53 GMT, Dec. 11.

  7. View in the Node 1/Unity module after docking

    NASA Image and Video Library

    1998-12-10

    S88-E-5112 (12-10-98)) --- Astronaut Jerry L. Ross, mission specialist, packs a bag of tools and equipment in the hatchway of the Unity connecting module. Ross and his crewmates were installing hand rails and other equipment and performing various tasks to ready the Unity and Zarya for their ISS roles. The photo was taken with an electronic still camera at 20:26:02 GMT, Dec. 10.

  8. Daniel Barry in Node 1/Unity module with tools

    NASA Image and Video Library

    2017-04-20

    S96-E-5080 (31 May 1999) --- Astronaut Daniel T. Barry, mission specialist, participates in the Flight Day 5 team effort to ready International Space Station (ISS) hardware. After ingressing the Pressurized Mating Adapter (PMA2), Barry and fellow crew members went into the Unity node to perform a variety of chores. The scene was recorded with an electronic still camera (ESC) at 01:54:41 GMT, May 31, 1999.

  9. Group Music Therapy as a Preventive Intervention for Young People at Risk: Cluster-Randomized Trial.

    PubMed

    Gold, Christian; Saarikallio, Suvi; Crooke, Alexander Hew Dale; McFerran, Katrina Skewes

    2017-07-01

    Music forms an important part of the lives and identities of adolescents and may have positive or negative mental health implications. Music therapy can be effective for mental disorders such as depression, but its preventive potential is unknown. The aim of this study was to examine whether group music therapy (GMT) is an effective intervention for young people who may be at risk of developing mental health problems, as indicated via unhealthy music use. The main question was whether GMT can reduce unhealthy uses of music and increase potentials for healthy uses of music, compared to self-directed music listening (SDML). We were also interested in effects of GMT on depressive symptoms, psychosocial well-being, rumination, and reflection. In an exploratory cluster-randomized trial in Australian schools, 100 students with self-reported unhealthy music use were invited to GMT (weekly sessions over 8 weeks) or SDML. Changes in the Healthy-Unhealthy Music Scale (HUMS) and mental health outcomes were measured over 3 months. Both interventions were well accepted. No effects were found between GMT and SDML (all p > 0.05); both groups tended to show small improvements over time. Younger participants benefited more from GMT, and older ones more from SDML (p = 0.018). GMT was associated with similar changes as SDML. Further research is needed to improve the processes of selecting participants for targeted interventions; to determine optimal dosage; and to provide more reliable evidence of effects of music-based interventions for adolescents. © the American Music Therapy Association 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com

  10. Characterization of antibody responses to combinations of a dengue virus type 2 DNA vaccine and two dengue virus type 2 protein vaccines in rhesus macaques.

    PubMed

    Simmons, Monika; Porter, Kevin R; Hayes, Curtis G; Vaughn, David W; Putnak, Robert

    2006-10-01

    We evaluated three nonreplicating dengue virus type 2 (DENV-2) vaccines: (i) a DNA vaccine containing the prM-E gene region (D), (ii) a recombinant subunit protein vaccine containing the B domain (i.e., domain III) of the E protein as a fusion with the Escherichia coli maltose-binding protein (R), and (iii) a purified inactivated virus vaccine (P). Groups of four rhesus macaques each were primed once and boosted twice using seven different vaccination regimens. After primary vaccination, enzyme-linked immunosorbent assay (ELISA) antibody levels increased most rapidly for groups inoculated with the P and DP combination, and by 1 month after the second boost, ELISA titers were similar for all groups. The highest plaque reduction neutralization test (PRNT) titers were seen in those groups that received the DR/DR/DR combination (geometric mean titer [GMT], 510), the P/P/P vaccine (GMT, 345), the DP/DP/DP combination (GMT, 287), and the R/R/R vaccine (GMT, 200). The next highest titers were seen in animals that received the D/R/R vaccine (GMT, 186) and the D/P/P vaccine (GMT, 163). Animals that received the D/D/D vaccine had the lowest neutralizing antibody titer (GMT, 49). Both ELISA and PRNT titers declined at variable rates. The only significant protection from viremia was observed in the P-vaccinated animals (mean of 0.5 days), which also showed the highest antibody concentration, including antibodies to NS1, and highest antibody avidity at the time of challenge.

  11. Emotional health and coping in spina bifida after goal management training: a randomized controlled trial.

    PubMed

    Stubberud, Jan; Langenbahn, Donna; Levine, Brian; Stanghelle, Johan; Schanke, Anne-Kristine

    2015-02-01

    Executive function impairments are common after spina bifida (SB) and potentially have a detrimental effect on the individual's emotional health and coping. Goal management training (GMT) is a cognitive rehabilitation method for improving executive function. The purpose of this study was to determine the efficacy of GMT on aspects of perceived emotional health and coping in individuals with SB. Thirty-eight adult subjects with SB were included in this randomized controlled trial. Inclusion was based upon the presence of executive functioning complaints. Experimental subjects (n = 24) received 21 hr of GMT, with efficacy of GMT being compared with results of subjects in a wait-list condition (n = 14). Four self-report questionnaires assessing emotional health and coping were utilized as outcome measures. All subjects were assessed at baseline, postintervention, and at 6-month follow-up. Findings indicated positive effects of GMT relative to the control group on measures of emotional health. Of note, the GMT group showed significant improvement, compared with control subjects, on a self-report inventory of depressive and anxiety symptoms after training, lasting at least 6 months posttreatment. Furthermore, both groups showed improvements after training on mental health components of health-related quality of life. Finally, the GMT group showed a significant increase in task-focused coping and a decrease in avoidant coping after training compared with pretreatment baseline assessment scores. Overall, findings indicate that by us a compensatory intervention to manage executive dysfunction, effective and lasting benefits can be achieved with regard to aspects of perceived emotional health and coping. PsycINFO Database Record (c) 2015 APA, all rights reserved.

  12. Single-Construct Polycistronic Doxycycline-Inducible Vectors Improve Direct Cardiac Reprogramming and Can Be Used to Identify the Critical Timing of Transgene Expression.

    PubMed

    Umei, Tomohiko C; Yamakawa, Hiroyuki; Muraoka, Naoto; Sadahiro, Taketaro; Isomi, Mari; Haginiwa, Sho; Kojima, Hidenori; Kurotsu, Shota; Tamura, Fumiya; Osakabe, Rina; Tani, Hidenori; Nara, Kaori; Miyoshi, Hiroyuki; Fukuda, Keiichi; Ieda, Masaki

    2017-08-19

    Direct reprogramming is a promising approach in regenerative medicine. Overexpression of the cardiac transcription factors Gata4, Mef2c, and Tbx5 (GMT) or GMT plus Hand2 (GHMT) directly reprogram fibroblasts into cardiomyocyte-like cells (iCMs). However, the critical timing of transgene expression and the molecular mechanisms for cardiac reprogramming remain unclear. The conventional doxycycline (Dox)-inducible temporal transgene expression systems require simultaneous transduction of two vectors (pLVX-rtTA/pLVX-cDNA) harboring the reverse tetracycline transactivator (rtTA) and the tetracycline response element (TRE)-controlled transgene, respectively, leading to inefficient cardiac reprogramming. Herein, we developed a single-construct-based polycistronic Dox-inducible vector (pDox-cDNA) expressing both the rtTA and TRE-controlled transgenes. Fluorescence activated cell sorting (FACS) analyses, quantitative RT-PCR, and immunostaining revealed that pDox-GMT increased cardiac reprogramming three-fold compared to the conventional pLVX-rtTA/pLVX-GMT. After four weeks, pDox-GMT-induced iCMs expressed multiple cardiac genes, produced sarcomeric structures, and beat spontaneously. Co-transduction of pDox-Hand2 with retroviral pMX-GMT increased cardiac reprogramming three-fold compared to pMX-GMT alone. Temporal Dox administration revealed that Hand2 transgene expression is critical during the first two weeks of cardiac reprogramming. Microarray analyses demonstrated that Hand2 represses cell cycle-promoting genes and enhances cardiac reprogramming. Thus, we have developed an efficient temporal transgene expression system, which could be invaluable in the study of cardiac reprogramming.

  13. Single-Construct Polycistronic Doxycycline-Inducible Vectors Improve Direct Cardiac Reprogramming and Can Be Used to Identify the Critical Timing of Transgene Expression

    PubMed Central

    Umei, Tomohiko C.; Yamakawa, Hiroyuki; Muraoka, Naoto; Sadahiro, Taketaro; Isomi, Mari; Haginiwa, Sho; Kojima, Hidenori; Kurotsu, Shota; Tamura, Fumiya; Osakabe, Rina; Tani, Hidenori; Nara, Kaori; Miyoshi, Hiroyuki; Fukuda, Keiichi; Ieda, Masaki

    2017-01-01

    Direct reprogramming is a promising approach in regenerative medicine. Overexpression of the cardiac transcription factors Gata4, Mef2c, and Tbx5 (GMT) or GMT plus Hand2 (GHMT) directly reprogram fibroblasts into cardiomyocyte-like cells (iCMs). However, the critical timing of transgene expression and the molecular mechanisms for cardiac reprogramming remain unclear. The conventional doxycycline (Dox)-inducible temporal transgene expression systems require simultaneous transduction of two vectors (pLVX-rtTA/pLVX-cDNA) harboring the reverse tetracycline transactivator (rtTA) and the tetracycline response element (TRE)-controlled transgene, respectively, leading to inefficient cardiac reprogramming. Herein, we developed a single-construct-based polycistronic Dox-inducible vector (pDox-cDNA) expressing both the rtTA and TRE-controlled transgenes. Fluorescence activated cell sorting (FACS) analyses, quantitative RT-PCR, and immunostaining revealed that pDox-GMT increased cardiac reprogramming three-fold compared to the conventional pLVX-rtTA/pLVX-GMT. After four weeks, pDox-GMT-induced iCMs expressed multiple cardiac genes, produced sarcomeric structures, and beat spontaneously. Co-transduction of pDox-Hand2 with retroviral pMX-GMT increased cardiac reprogramming three-fold compared to pMX-GMT alone. Temporal Dox administration revealed that Hand2 transgene expression is critical during the first two weeks of cardiac reprogramming. Microarray analyses demonstrated that Hand2 represses cell cycle-promoting genes and enhances cardiac reprogramming. Thus, we have developed an efficient temporal transgene expression system, which could be invaluable in the study of cardiac reprogramming. PMID:28825623

  14. In Vivo Cardiac Cellular Reprogramming Efficacy Is Enhanced by Angiogenic Preconditioning of the Infarcted Myocardium With Vascular Endothelial Growth Factor

    PubMed Central

    Mathison, Megumi; P. Gersch, Robert; Nasser, Ahmed; Lilo, Sarit; Korman, Mallory; Fourman, Mitchell; Hackett, Neil; Shroyer, Kenneth; Yang, Jianchang; Ma, Yupo; Crystal, Ronald G.; Rosengart, Todd K.

    2012-01-01

    Background In situ cellular reprogramming offers the possibility of regenerating functional cardiomyocytes directly from scar fibroblasts, obviating the challenges of cell implantation. We hypothesized that pretreating scar with gene transfer of the angiogenic vascular endothelial growth factor (VEGF) would enhance the efficacy of this strategy. Methods and Results Gata4, Mef2c, and Tbx5 (GMT) administration via lentiviral transduction was demonstrated to transdifferentiate rat fibroblasts into (induced) cardiomyocytes in vitro by cardiomyocyte marker studies. Fisher 344 rats underwent coronary ligation and intramyocardial administration of an adenovirus encoding all 3 major isoforms of VEGF (AdVEGF‐All6A+) or an AdNull control vector (n=12/group). Lentivirus encoding GMT or a GFP control was administered to each animal 3 weeks later, followed by histologic and echocardiographic analyses. GMT administration reduced the extent of fibrosis by half compared with GFP controls (12±2% vs 24±3%, P<0.01) and reduced the number of myofibroblasts detected in the infarct zone by 4‐fold. GMT‐treated animals also demonstrated greater density of cardiomyocyte‐specific marker beta myosin heavy chain 7+ cells compared with animals receiving GFP with or without VEGF (P<0.01). Ejection fraction was significantly improved after GMT vs GFP administration (12±3% vs −7±3%, P<0.01). Eight (73%) GFP animals but no GMT animals demonstrated decreased ejection fraction during this interval (P<0.01). Also, improvement in ejection fraction was 4‐fold greater in GMT/VEGF vs GMT/null animals (17±2% vs 4±1%, P<0.05). Conclusions VEGF administration to infarcted myocardium enhances the efficacy of GMT‐mediated cellular reprogramming in improving myocardial function and reducing the extent of myocardial fibrosis compared with the use of GMT or VEGF alone. PMID:23316332

  15. Antibody responses to influenza viruses in paediatric patients and their contacts at the onset of the 2009 pandemic in Mexico.

    PubMed

    Miranda-Novales, Guadalupe; Arriaga-Pizano, Lourdes; Herrera-Castillo, Cristina; Pastelin-Palacios, Rodolfo; Valero-Pacheco, Nuriban; Pérez-Toledo, Marisol; Ferat-Osorio, Eduardo; Solórzano-Santos, Fortino; Vázquez-Rosales, Guillermo; Espitia-Pinzón, Clara; Zamudio-Lugo, Irma; Meza-Chávez, Abigail; Klenerman, Paul; Isibasi, Armando; López-Macías, Constantino

    2015-03-15

    On April 2009, the Mexican Ministry of Health received notification of cases of severe pneumonia mostly affecting young healthy people; this was the beginning of the first influenza pandemic of the 21st century. The nature of the immune response to the influenza A(H1N1)2009 pandemic strain in Mexico at the beginning of the pandemic outbreak has not been completely defined. We describe the serological response to the 2009 pandemic influenza virus in paediatric patients with influenza-like illness, their household contacts (HHCs), and exposed health-care workers (HCWs) at the beginning of the pandemic outbreak in Mexico City. thirty pre-epidemic and 129 epidemic samples were collected and serum antibodies were measured against A(H1N1)2009 pandemic virus and two non-pandemic swine influenza viruses by an haemagglutination inhibition assay . 91% (29/32) of the convalescence samples from confirmed patients had an antibody titre ≥ 10 (GMT 25), 63% (41/65) of the HHCs (GMT 12), 41% of HCWs (GMT 6) and 13% (4/30) of pre-epidemic samples (GMT 6) for the pandemic influenza virus. Of the 32 confirmed cases, 60% had an antibody titre ≥ 40 for the pandemic strain, 53% for the A/swine/Iowa(H1N1) virus (GMT 62) and 43% for the A/swine/Texas(H3N2) virus (GMT 66). The antibody response to 2009 pandemic influenza virus was widespread in convalescence samples from patients with confirmed pandemic influenza infection but the GMT was below the protective titre. There was no evidence that antibodies to the swine influenza viruses had cross-protective effect against the 2009 pandemic influenza virus.

  16. [Study on the neutralization capacity of different types of human measles virus vaccine and the epidemic strains].

    PubMed

    Feng, Yan; Lu, Yi-yu; Yan, Ju-ying; Jiang, Xiao-hui; Shi, Wen; Xu, Chang-ping; Li, Zhen

    2007-11-01

    To explore the neutralization capacities of different types of human serum to measles virus epidemic strains and vaccine strain. Neutralization antibody (NT) to Shanghai 191 and measles virus isolates in 2005 were tested using acute and convalescent serum samples from diagnosed measles patients, children serum samples collected before and after vaccination and serum samples of migrant residents, from 3 different regions. Additionally, animal immune serum referring to vaccine strain and 3 epidemic strains were prepared and used to undergo crossing neutralization test with corresponding strains mentioned-above. Antigenic ratios were calculated. GMT value of NT of after-immune serum to vaccine strains was 50.82,1.86 times higher than that to MVi/ZJ/05/7 (GMT was 27.35), whereas GMT value of convalescent serum to MVi/ZJ/05/7 (GMT was 386.95) was obviously higher than that to vaccine strain (GMT was 1:151.83),and GMT value of migrant residents' serum in 3 regions to MVi/ZJ/05/7 were 2.22-4.17 times lower than that to vaccine strain. Meanwhile,the antigenic ratios between MVi/ZJ/ 99/1, MVi/ZJ/04/1, MVi/ZJ/05/7 and vaccine strain were found to be 4.28,5.24 and 5.66 respectively. Additionally,low NT titers to vaccine strain were found in patients' acute sera and GMT value was over 1:4. There were obvious differences on neutralization antibody of different types of serum to measles vaccine strain and epidemic strains which indicating the antigenic diversity of epidemic strains had influenced the protective effectiveness of vaccine antibody to epidemic strains. It was of significance to carry on research projects on the antigenic diversity and effectiveness of measles vaccine.

  17. Combined Goal Management Training and Mindfulness meditation improve executive functions and decision-making performance in abstinent polysubstance abusers.

    PubMed

    Alfonso, José P; Caracuel, Alfonso; Delgado-Pastor, Luis C; Verdejo-García, Antonio

    2011-08-01

    The clinical relevance of neuropsychological deficits in addicted individuals has fostered interest in treatment strategies aimed to effectively target executive and decision-making dysfunction. One of the best-validated interventions for executive dysfunction is Goal Management Training (GMT) (Robertson et al., 2005), an interactive program aimed at improving participants' organization and ability to achieve goals. Mindfulness-based meditation can complement GMT training in order to improve attentional scanning and "reading" of emotional signals involved in adaptive decision-making. In this pilot study we investigated the efficacy of a 7-week program including GMT+Mindfulness (GMT+MF), as compared to standard treatment alone (STx), for reducing executive and decision-making deficits in an outpatient sample of alcohol and polysubstance abusers. Eighteen participants were enrolled in the GMT+MF group, whereas 16 participants formed the STx group; both groups were matched for relevant demographic and clinical variables, and pre-treatment degree of executive dysfunction. Results showed that the individuals enrolled in GMT+MF significantly improved their performance on neuropsychological measures of working memory (Letter Number Sequencing), response inhibition (Stroop) and decision-making (Iowa Gambling Task) after the treatment; whereas individuals enrolled in STx alone failed to show significant changes. These preliminary results indicate that the GMT+MF intervention may be effective in reducing executive and decision-making deficits in polysubstance abusers, and they support future randomized controlled studies aimed at examining the extent to which these improvements may generalize to every day functioning and may affect the capacity of addicted individuals to achieve and maintain abstinence. Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

  18. Rehabilitation of Executive Functioning in Patients with Frontal Lobe Brain Damage with Goal Management Training

    PubMed Central

    Levine, Brian; Schweizer, Tom A.; O'Connor, Charlene; Turner, Gary; Gillingham, Susan; Stuss, Donald T.; Manly, Tom; Robertson, Ian H.

    2011-01-01

    Executive functioning deficits due to brain disease affecting frontal lobe functions cause significant real-life disability, yet solid evidence in support of executive functioning interventions is lacking. Goal Management Training (GMT), an executive functioning intervention that draws upon theories concerning goal processing and sustained attention, has received empirical support in studies of patients with traumatic brain injury, normal aging, and case studies. GMT promotes a mindful approach to complex real-life tasks that pose problems for patients with executive functioning deficits, with a main goal of periodically stopping ongoing behavior to monitor and adjust goals. In this controlled trial, an expanded version of GMT was compared to an alternative intervention, Brain Health Workshop that was matched to GMT on non-specific characteristics that can affect intervention outcome. Participants included 19 individuals in the chronic phase of recovery from brain disease (predominantly stroke) affecting frontal lobe function. Outcome data indicated specific effects of GMT on the Sustained Attention to Response Task as well as the Tower Test, a visuospatial problem-solving measure that reflected far transfer of training effects. There were no significant effects on self-report questionnaires, likely owing to the complexity of these measures in this heterogeneous patient sample. Overall, these data support the efficacy of GMT in the rehabilitation of executive functioning deficits. PMID:21369362

  19. Immunopotentiation of outer membrane protein through anti-idiotype Pasteurella multocida vaccine in rabbits.

    PubMed

    Arif, Javid; Rahman, Sajjad-Ur; Arshad, Muhammad; Akhtar, Pervez

    2013-11-01

    Pasteurella multocida was isolated from cattle affected with haemorrhagic septicaemia and characterized on the basis of morphological, cultural and biochemical tests. Bacterial outer membrane proteins (OMPs) were extracted with 1% Sarkosyl method. P. multocida anti-idiotype vaccine prepared from OMPs (21.3 mg per 100 ml), was evaluated and compared with bacterin supplemented with 10% OMPs and plain alum-adsorbed bacterin in rabbit models. It was observed that OMPs-anti-idiotype vaccine induced high levels of antibody titres (geomean titres -GMT) detected using indirect haemagglutination (IHA) test. The OMPs anti-idiotype antibody titres of 168.9 GMT were obtained to 42.2 GMT in OMPs supplemented bacterin on 21 days post vaccination, while the plain bacterin had the least titre of 27.9 GMT. The OMPs-anti-idiotype vaccine provoked better immunogenic response in terms of highest GMT titres and long lasting effect in rabbits and 100% protection against the challenge with homologous strain of P. multocida,while 88% protection was obtained in rabbits, given OMPs supplemented bacterin. Copyright © 2013 The International Alliance for Biological Standardization. Published by Elsevier Ltd. All rights reserved.

  20. Persistence of measles neutralizing antibody related to vaccine and natural infection acquired before HIV infection.

    PubMed

    Isa, M B; Pavan, J V; Sicilia Don, P; Grutadauria, S; Martinez, L C; Giordano, M O; Masachessi, G; Barril, P A; Nates, S V

    2014-08-01

    Little is known about long-lasting measles protective immunity when exposure to wild-type or vaccine measles virus precedes HIV infection. The results obtained suggest that measles immunity wanes and the lowest measles geometric mean titres (GMT) were significantly associated with measles vaccine-induced immunity in individuals that later developed HIV infection (86% prevalence, GMT 164 mIU/ml) compared to naturally induced immunity in HIV-infected adults (100% prevalence, GMT 340 mIU/ml, P = 0·0082) or non-HIV infected adults (100%, GMT 724 mIU/ml, P = 0·0001), and vaccine-induced immunity in non-HIV-infected adults (100%, GMT 347 mIU/ml, P = 0·017). The study was conducted in an area without wild-type virus circulation since 2000. The absence of virus circulating may alter the paradigm of lifelong immunity to measles virus after vaccination. As the proportion of HIV-infected individuals possessing only vaccine-induced immunity continues to grow, checking the status of measles immunity in this group is strongly recommended.

  1. Rehabilitation of Executive Functions in a Real-Life Setting: Goal Management Training Applied to a Person with Schizophrenia

    PubMed Central

    Levaux, M.-N.; Larøi, F.; Malmedier, M.; Offerlin-Meyer, I.; Danion, J.-M.; Van der Linden, M.

    2012-01-01

    The aim was to assess the efficacy of a modified version of Goal Management Training (GMT) in a person with schizophrenia who had difficulties in attaining the final goal for new and multitasking daily-life situations. GMT is designed to improve abilities in establishing goal-directed plans and carrying them out effectively. Beneficial effects of GMT were measured for several clinical questionnaires, laboratory tasks, and three real-life situations: meal preparation (trained, familiar); washing (nontrained, familiar); meeting preparation (nontrained, unfamiliar). The results revealed improvement in planning and on trained laboratory and meal preparation tasks and a generalization of GMT effects on nontrained laboratory and everyday tasks. Self-esteem also improved. Finally, a two-year followup indicated the durability of the beneficial effects. PMID:23094177

  2. Willingness to use HIV pre-exposure prophylaxis among gay men, other men who have sex with men and transgender women in Myanmar.

    PubMed

    Draper, Bridget L; Fowkes, Freya J I; Oo, Zaw Min; Thein, Zaw Win; Aung, Poe Poe; Veronese, Vanessa; Ryan, Claire; Thant, Myo; Hughes, Chad; Stoové, Mark

    2017-07-26

    HIV pre-exposure prophylaxis (PrEP) has emerged as a key component of contemporary HIV combination prevention strategies. To explore the local suitability of PrEP, country-specific acceptability studies are needed to inform potential PrEP implementation. In the context of Myanmar, in addition to resource constraints, HIV service access by gay men, other men who have sex with men, and transgender women (GMT) continues to be constrained by legislative and community stigma and marginalization. We aimed to determine PrEP acceptability among GMT in Myanmar and explore the factors associated with willingness to use PrEP. GMT were recruited in Yangon and Mandalay through local HIV prevention outreach programmes in November and December 2014. Quantitative surveys were administered by trained peer educators and collected data on demographics, sexual risk, testing history and PrEP acceptability. A modified six-item PrEP acceptability scale classified self-reported HIV undiagnosed GMT as willing to use PrEP. Multivariable logistic regression identified factors associated with willingness to use PrEP. Among 434 HIV undiagnosed GMT, PrEP awareness was low (5%). PrEP acceptability was high, with 270 (62%) GMT classified as willing to use PrEP. GMT recruited in Mandalay (adjusted odds ratio (aOR) = 1.79; 95%CI = 1.05-3.03), who perceived themselves as likely to become HIV positive (aOR = 1.82; 95%CI = 1.10-3.02), who had more than one recent regular partner (aOR = 2.94; 95%CI = 1.41-6.14), no regular partners (aOR = 2.05; 95%CI = 1.10-3.67), more than five casual partners (aOR = 2.05; 95%CI = 1.06-3.99) or no casual partners (aOR = 2.25; 95%CI = 1.23-4.11) were more likely to be willing to use PrEP. The association between never or only occasionally using condoms with casual partners and willingness to use PrEP was marginally significant (aOR = 2.02; 95%CI = 1.00-4.10). GMT who reported concern about side effects and long-term use of PrEP were less likely (aOR = 0.35; 95%CI = 0.21-0.59) to be willing to use PrEP. This is the first study to assess PrEP acceptability in Myanmar. Findings suggest PrEP is an acceptable prevention option among GMT in Myanmar, providing they are not required to pay for it. Implementation/demonstration projects are needed to explore the feasibility and cost-effectiveness of PrEP as a prevention option for GMT in Myanmar.

  3. Myelin water and T(2) relaxation measurements in the healthy cervical spinal cord at 3.0T: repeatability and changes with age.

    PubMed

    MacMillan, Erin L; Mädler, Burkhard; Fichtner, Nicole; Dvorak, Marcel F; Li, David K B; Curt, Armin; MacKay, Alex L

    2011-01-15

    Multiecho T(2) relaxation measurements offer specific information about myelin content through the myelin water fraction (MWF), as well as about the water environments through the intra- and extra-cellular (IE), and global, geometric mean T(2) (GMT(2)) times. While these measurements have yielded new insights into brain development and pathologies, they have yet to be thoroughly investigated in the spinal cord. The goals of this study were: (1) to apply a new 3D multiecho T(2) relaxation measurement in the cervical spine with sufficient axial resolution to distinguish grey and white matter; (2) to perform a pilot reliability assessment of the resulting MWF and GMT(2) measures in a target population; and (3) to detect differences in these measures between a younger cohort (20-30 years of age) and an older cohort (50-75 years of age) of healthy adults. The results demonstrated that the MWF in younger healthy adults follows the known pattern of lower myelin content in grey matter (mean (95% confidence interval)) (0.049 (0.030-0.067)) as compared to white matter (0.296 (0.275-0.317), p<0.001). The reliability coefficients were 0.65 and 0.82 for the MWF in the dorsal (DC) and lateral column (LC) white matter, respectively; 0.79 and 0.52 for the IE GMT(2); and 0.74 and 0.73 for the global GMT(2). Significantly lower MWF were found in the older adults than in the younger adults (DC p=0.014; LC p=0.012), as well as lower IE GMT(2) times (DC p=0.008; LC p=0.042), however, the global GMT(2) times did not show any differences. These changes in MWF and IE GMT(2) times, but not in global GMT(2) times, indicate that multiecho T(2) relaxation measures are sensitive to changes in myelin integrity and cell morphology that may not be apparent on conventional T(2) weighted images. Copyright © 2010 Elsevier Inc. All rights reserved.

  4. 76 FR 22677 - Pacific Fishery Management Council; Public Meeting

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-04-22

    ... Groundfish Management Team (GMT). The meeting is open to the public. DATES: The conference call will be held... the Groundfish Management Team to review the developing Ecosystem Fishery Management Plan. The GMT...

  5. The GMT-Consortium Large Earth Finder (G-CLEF) : An Optical Echelle Spectrograph for the Giant Magellan Telescope (GMT) with Multi-Object Spectroscopy (MOS) Capability

    NASA Astrophysics Data System (ADS)

    Szentgyorgyi, Andrew

    2017-09-01

    "The GMT-Consortium Large Earth Finder (G-CLEF) is an optical band echelle spectrograph that has been selected as the first light instrument for the Giant Magellan Telescope (GMT). G-CLEF is a general purpose, high dispersion instrument that is fiber fed and capable of extremely precise radial velocity (PRV) measurements. G-CLEF will have a novel multi-object spectroscopy (MOS) capability that will be useful for a number of exoplanet science programs. I describe the general properties of G-CLEF and the systems engineering analyses, especially for PRV, that drove the current G-CLEF design. The requirements for calibration of the MOS channel are presented along with several novel approaches for achieving moderate radial velocity precision in the MOS mode."

  6. Antibody responses to natural influenza A/H1N1/09 disease or following immunization with adjuvanted vaccines, in immunocompetent and immunocompromised children.

    PubMed

    Meier, Sara; Bel, Michael; L'huillier, Arnaud; Crisinel, Pierre-Alex; Combescure, Christophe; Kaiser, Laurent; Grillet, Stéphane; Pósfay-Barbe, Klara; Siegrist, Claire-Anne

    2011-04-27

    To compare antibody responses elicited by influenza A/H1N1/09 disease and immunization with adjuvanted vaccines, in immunocompetent or immunocompromised children. Prospective parallel cohort field study enrolling children with confirmed influenza A/H1N1/09 disease or immunized with 1 (immunocompetent) or 2 (immunocompromised) doses of influenza A/H1N1/09 squalene-based AS03- or MF59-adjuvanted vaccines. Antibody geometric mean titers (GMT) were measured by hemagglutination inhibition (HAI) and microneutralization (MN) assays 4-6 weeks after vaccination/disease. Vaccine adverse events were self-recorded in a 7-day diary. Antibody titers were as high in 48 immunocompetent children after a single immunization (HAI and MN seroprotection rates: 98%; HAI-GMT: 395, MN-GMT: 370) as in 51 convalescent children (seroprotection rates: 98% (HAI) and 92% (MN); GMT: 350 (HAI) and 212 (MN). Twenty-seven immunocompromised children reached slightly lower seroprotection rates (HAI: 89%, MN: 85%) but similar antibody titers (HAI-GMT: 306, MN-GMT: 225) after 2 immunizations. Adverse events increased with age (P=0.01) and were more frequent with Pandemrix® than Focetria® (P=0.03). Similarly high seroresponses may be expected in immunocompetent children after a single dose of adjuvanted vaccines as responses of convalescent children. Two vaccine doses were sufficient for most immunocompromised children. NCT0102293 and NCT01022905. Copyright © 2011 Elsevier Ltd. All rights reserved.

  7. Rehabilitation of Executive Functions in Patients with Chronic Acquired Brain Injury with Goal Management Training, External Cuing, and Emotional Regulation: A Randomized Controlled Trial.

    PubMed

    Tornås, Sveinung; Løvstad, Marianne; Solbakk, Anne-Kristin; Evans, Jonathan; Endestad, Tor; Hol, Per Kristian; Schanke, Anne-Kristine; Stubberud, Jan

    2016-04-01

    Executive dysfunction is a common consequence of acquired brain injury (ABI), causing significant disability in daily life. This randomized controlled trial investigated the efficacy of Goal Management Training (GMT) in improving executive functioning in patients with chronic ABI. Seventy patients with a verified ABI and executive dysfunction were randomly allocated to GMT (n=33) or a psycho-educative active control condition, Brain Health Workshop (BHW) (n=37). In addition, all participants received external cueing by text messages. Neuropsychological tests and self-reported questionnaires of executive functioning were administered pre-intervention, immediately after intervention, and at 6 months follow-up. Assessors were blinded to group allocation. Questionnaire measures indicated significant improvement of everyday executive functioning in the GMT group, with effects lasting at least 6 months post-treatment. Both groups improved on the majority of the applied neuropsychological tests. However, improved performance on tests demanding executive attention was most prominent in the GMT group. The results indicate that GMT combined with external cueing is an effective metacognitive strategy training method, ameliorating executive dysfunction in daily life for patients with chronic ABI. The strongest effects were seen on self-report measures of executive functions 6 months post-treatment, suggesting that strategies learned in GMT were applied and consolidated in everyday life after the end of training. Furthermore, these findings show that executive dysfunction can be improved years after the ABI.

  8. Software requirements flow-down and preliminary software design for the G-CLEF spectrograph

    NASA Astrophysics Data System (ADS)

    Evans, Ian N.; Budynkiewicz, Jamie A.; DePonte Evans, Janet; Miller, Joseph B.; Onyuksel, Cem; Paxson, Charles; Plummer, David A.

    2016-08-01

    The Giant Magellan Telescope (GMT)-Consortium Large Earth Finder (G-CLEF) is a fiber-fed, precision radial velocity (PRV) optical echelle spectrograph that will be the first light instrument on the GMT. The G-CLEF instrument device control subsystem (IDCS) provides software control of the instrument hardware, including the active feedback loops that are required to meet the G-CLEF PRV stability requirements. The IDCS is also tasked with providing operational support packages that include data reduction pipelines and proposal preparation tools. A formal, but ultimately pragmatic approach is being used to establish a complete and correct set of requirements for both the G-CLEF device control and operational support packages. The device control packages must integrate tightly with the state-machine driven software and controls reference architecture designed by the GMT Organization. A model-based systems engineering methodology is being used to develop a preliminary design that meets these requirements. Through this process we have identified some lessons that have general applicability to the development of software for ground-based instrumentation. For example, tasking an individual with overall responsibility for science/software/hardware integration is a key step to ensuring effective integration between these elements. An operational concept document that includes detailed routine and non- routine operational sequences should be prepared in parallel with the hardware design process to tie together these elements and identify any gaps. Appropriate time-phasing of the hardware and software design phases is important, but revisions to driving requirements that impact software requirements and preliminary design are inevitable. Such revisions must be carefully managed to ensure efficient use of resources.

  9. Loss of Inositol Phosphorylceramide Sphingolipid Mannosylation Induces Plant Immune Responses and Reduces Cellulose Content in Arabidopsis[OPEN

    PubMed Central

    Ishikawa, Toshiki; Rennie, Emilie A.; Lao, Jeemeng; Yan, Jingwei; Tsai, Alex Yi-Lin; Baidoo, Edward E.K.; Demura, Taku; Kawai-Yamada, Maki

    2016-01-01

    Glycosylinositol phosphorylceramides (GIPCs) are a class of glycosylated sphingolipids found in plants, fungi, and protozoa. These lipids are abundant in the plant plasma membrane, forming ∼25% of total plasma membrane lipids. Little is known about the function of the glycosylated headgroup, but two recent studies have indicated that they play a key role in plant signaling and defense. Here, we show that a member of glycosyltransferase family 64, previously named ECTOPICALLY PARTING CELLS1, is likely a Golgi-localized GIPC-specific mannosyl-transferase, which we renamed GIPC MANNOSYL-TRANSFERASE1 (GMT1). Sphingolipid analysis revealed that the Arabidopsis thaliana gmt1 mutant almost completely lacks mannose-carrying GIPCs. Heterologous expression of GMT1 in Saccharomyces cerevisiae and tobacco (Nicotiana tabacum) cv Bright Yellow 2 resulted in the production of non-native mannosylated GIPCs. gmt1 displays a severe dwarfed phenotype and a constitutive hypersensitive response characterized by elevated salicylic acid and hydrogen peroxide levels, similar to that we previously reported for the Golgi-localized, GIPC-specific, GDP-Man transporter GONST1 (Mortimer et al., 2013). Unexpectedly, we show that gmt1 cell walls have a reduction in cellulose content, although other matrix polysaccharides are unchanged. PMID:27895225

  10. Randomized trial of HPV4 vaccine assessing the response to HPV4 vaccine in two schedules among Peruvian female sex workers.

    PubMed

    Brown, Brandon; Blas, Magaly; Cabral, Alejandra; Carcamo, Cesar; Gravitt, Patti; Halsey, Neal

    2012-03-16

    Two hundred female sex workers (FSWs) in Lima, Peru were randomized to receive HPV4 vaccine in the standard (0, 2, 6 months) or a modified schedule (0, 3, 6 months). One hundred and eighty four (92%) participants completed 3 doses of vaccine. Baseline seropositive rates were 58% for HPV6, 22.5% for HPV11, 41.5% for HPV16, and 13% for HPV18. The final geometric mean antibody titer (GMT) following vaccination was significantly greater for women who were seropositive at baseline compared to seronegative women: HPV6 (GMT ratio=2.3, p<0.01), HPV11 (GMT ratio=2.7, p<0.01), HPV16 (GMT ratio=1.3, p=0.04), and HPV18 (GMT ratio=2.4, p<0.01). Antibody titers in the modified schedule were not inferior to those in the standard schedule, suggesting the modified schedule may be paired with required STD visits. Although all women benefit from vaccination, administration at a younger age and before sexual debut is needed to achieve maximum protection from vaccine. Copyright © 2012 Elsevier Ltd. All rights reserved.

  11. Attenuated live cholera vaccine strain CVD 103-HgR elicits significantly higher serum vibriocidal antibody titers in persons of blood group O.

    PubMed Central

    Lagos, R; Avendaño, A; Prado, V; Horwitz, I; Wasserman, S; Losonsky, G; Cryz, S; Kaper, J B; Levine, M M

    1995-01-01

    Persons of blood group O are at increased risk of developing cholera gravis. In a randomized, placebo-controlled, double-blind safety-immunogenicity trial of live oral cholera vaccine CVD 103-HgR in 5- to 9-year-old Chilean children, vibriocidal antibody seroconversion (74% overall) did not differ by blood group. However, the reciprocal geometric mean titer (GMT) in blood group O vaccines (GMT = 486) was higher than that in non-O vaccines (GMT = 179) (P < 0.02). PMID:7822046

  12. [Peritubular capillary injury in Chinese herb guan-mu-tong-induced acute tubular necrosis].

    PubMed

    Yang, Li; Li, Xiao-mei; Wang, Su-xia; Wang, Hai-yan

    2005-07-01

    To explore the role and mechanisms of peritubular capillary (PTC) injury in the progression of Chinese Herb guan-mu-tong (GMT, aristolochiae manshuriensis kom) induced acute tubular necrosis (GMT-ATN). Renal biopsy tissue from 4 cases of GMT-ATN and 5 cases of antibiotic induced ATN (A-ATN) were included in the study. Tubulointerstitial injury was semi-quantitatively assessed. Immunohistochemical SP method was applied to reveal PTC as well as the expression of vascular endothelial growth factor (VEGF). Ultra microstructure of endothelial cells and basement membrane of PTC was detected by electronic microscopy (EM). 5 cases of minor mesangioproliferative non-IgA glomerulonephritis were selected as a control group. The density of PTC was decreased significantly in GMT-ATN, as compared with the A-ATN and control group (211.08 +/- 56.15 vs 413.54 +/- 66.59, 536.62 +/- 68.38, P < 0.01). Dilated and deformed PTC lumina were noted in GMT-ATN with some endothelial cells and basement membrane partially disrupted. Most endothelial cells were found to be swollen with vacuoles dispersed in the cell plasma. The basement membrane was partially shrunk and thickened. The expression of VEGF in renal tubular epithelial cells (RTEC) was much less in the GMT-ATN than that in A-ATN group 2.1 (0-3.86)% vs [42.5 (31.33-60.25)%, P < 0.01], even though it was higher than that in the control group [23.1 (18.2-39.5)%, P < 0.01]; the expression was correlated with PTC density. Close correlation was also found between RTEC regeneration and PTC density, as well as VEGF expression (r = 0.880 and 0.802 respectively, P < 0.01). PTC was markedly injured in GMT-ATN; this could be one of the cause for the continuously progressing tubulointerstitial damage. The low expression of VEGF in RTEC might contribute to the PTC injury process.

  13. Responses to hepatitis B vaccine in isolated anti-HBc positive adults

    PubMed Central

    Yao, Jun; Ren, Wen; Chen, Yongdi; Jiang, Zhenggang; Shen, Lingzhi; Shan, Huan; Dai, Xuewei; Li, Jing; Liu, Ying; Qiu, Yan; Ren, Jingjing

    2016-01-01

    ABSTRACT Immune responses of isolated anti-HBc subjects are not well characterized in populations in China. This study aimed to evaluate immune responses to hepatitis B vaccination in isolated anti-HBc positive subjects. A cohort of 608 subjects were selected and separated into isolated anti-HBc (negative for HBsAg and anti-HBs, positive for anti-HBc) and control (negative for HBsAg, anti-HBs, and anti-HBc) groups, who were matched by age and sex. All subjects received 3 doses of hepatitis B vaccine (20μg) at months 0, 1, and 3, followed by testing for serological responses 1 month after the third vaccination. The positive seroprotection rate and geometric mean titer (GMT) for hepatitis B surface antibody (anti-HBs) of isolated anti-HBc subjects were significantly lower than those in the control group(86.2% vs.92.1%, P = 0.02; 47.26 vs.97.81 mIU/mL, P < 0.001). When stratified by age, positive seroprotection rate in the isolated anti-HBc group were 92%, 88.5% and 79.4% in the 20–34, 35–49, and 50–60 y old subgroups, respectively (χ2 = 5.919, P = 0.04). Additionally, the GMT level for anti-HBs in the isolated anti-HBc group for different age subgroups were 104.43, 47.87 and 31.79 mIU/mL respectively (χ2 = 19.44, P < 0.001). The GMT level for anti-HBc before vaccination were negatively correlated with GMT for anti-HBs after 3 doses of hepatitis B vaccine (r = −0.165, P < 0.001). In conclusion, isolated anti-HBc positive subjects can achieve good immune responses after hepatitis B vaccination, and the positive seroprotection rate and GMT level for anti-HBs were lower than the control group. Better responses could be observed in young adults, and significant negative correlations were found between GMT of anti-HBc before vaccination and GMT of anti-HBs after vaccination. PMID:27065099

  14. Responses to hepatitis B vaccine in isolated anti-HBc positive adults.

    PubMed

    Yao, Jun; Ren, Wen; Chen, Yongdi; Jiang, Zhenggang; Shen, Lingzhi; Shan, Huan; Dai, Xuewei; Li, Jing; Liu, Ying; Qiu, Yan; Ren, Jingjing

    2016-07-02

    Immune responses of isolated anti-HBc subjects are not well characterized in populations in China. This study aimed to evaluate immune responses to hepatitis B vaccination in isolated anti-HBc positive subjects. A cohort of 608 subjects were selected and separated into isolated anti-HBc (negative for HBsAg and anti-HBs, positive for anti-HBc) and control (negative for HBsAg, anti-HBs, and anti-HBc) groups, who were matched by age and sex. All subjects received 3 doses of hepatitis B vaccine (20μg) at months 0, 1, and 3, followed by testing for serological responses 1 month after the third vaccination. The positive seroprotection rate and geometric mean titer (GMT) for hepatitis B surface antibody (anti-HBs) of isolated anti-HBc subjects were significantly lower than those in the control group(86.2% vs.92.1%, P = 0.02; 47.26 vs.97.81 mIU/mL, P < 0.001). When stratified by age, positive seroprotection rate in the isolated anti-HBc group were 92%, 88.5% and 79.4% in the 20-34, 35-49, and 50-60 y old subgroups, respectively (χ2 = 5.919, P = 0.04). Additionally, the GMT level for anti-HBs in the isolated anti-HBc group for different age subgroups were 104.43, 47.87 and 31.79 mIU/mL respectively (χ2 = 19.44, P < 0.001). The GMT level for anti-HBc before vaccination were negatively correlated with GMT for anti-HBs after 3 doses of hepatitis B vaccine (r = -0.165, P < 0.001). In conclusion, isolated anti-HBc positive subjects can achieve good immune responses after hepatitis B vaccination, and the positive seroprotection rate and GMT level for anti-HBs were lower than the control group. Better responses could be observed in young adults, and significant negative correlations were found between GMT of anti-HBc before vaccination and GMT of anti-HBs after vaccination.

  15. Inefficient reprogramming of fibroblasts into cardiomyocytes using Gata4, Mef2c, Tbx5

    PubMed Central

    Chen, J.X.; Krane, M.; Deutsch, M. A.; Wang, L.; Rav-Acha, M.; Gregoire, S.; Engels, M. C.; Rajarajan, K.; Karra, R.; Abel, E. D.; Wu, J. C.; Milan, D.; Wu, S. M.

    2012-01-01

    Rationale Direct reprogramming of fibroblasts into cardiomyocytes is a novel strategy for cardiac regeneration. However, the key determinants involved in this process are unknown. Objective To assess the efficiency of direct fibroblast reprogramming via viral overexpression of GATA4, Mef2c, and Tbx5 (GMT). Methods and Results We induced GMT overexpression in murine tail tip fibroblasts (TTFs) and cardiac fibroblasts (CFs) from multiple lines of transgenic mice carrying different cardiomyocyte lineage reporters. We found that the induction of GMT overexpression in TTFs and CFs is inefficient at inducing molecular and electrophysiological phenotypes of mature cardiomyocytes. In addition, transplantation of GMT infected CFs into injured mouse hearts resulted in decreased cell survival with minimal induction of cardiomyocyte genes. Conclusions Significant challenges remain in our ability to convert fibroblasts into cardiomyocyte-like cells and a greater understanding of cardiovascular epigenetics is needed to increase the translational potential of this strategy. PMID:22581928

  16. Climate impacts of geoengineering in a delayed mitigation scenario

    NASA Astrophysics Data System (ADS)

    Tilmes, S.; Sanderson, B. M.; O'Neill, B. C.

    2016-08-01

    Decarbonization in the immediate future is required to limit global mean temperature (GMT) increase to 2°C relative to preindustrial conditions, if geoengineering is not considered. Here we use the Community Earth System Model (CESM) to investigate climate outcomes if no mitigation is undertaken until GMT has reached 2°C. We find that late decarbonization in CESM without applying stratospheric sulfur injection (SSI) leads to a peak temperature increase of 3°C and GMT remains above 2° for 160 years. An additional gradual increase and then decrease of SSI over this period reaching about 1.5 times the aerosol burden resulting from the Mount Pinatubo eruption in 1992 would limit the increase in GMT to 2.0° for the specific pathway and model. SSI produces mean and extreme temperatures in CESM comparable to an early decarbonization pathway, but aridity is not mitigated to the same extent.

  17. Antibody responses after vaccination against equine influenza in the Republic of Korea in 2013.

    PubMed

    Kim, Eun-Ju; Kim, Bo-Hye; Yang, Sunjoo; Choi, Eun-Jin; Shin, Ye-Jin; Song, Jae-Young; Shin, Yeun-Kyung

    2015-11-01

    In this study, antibody responses after equine influenza vaccination were investigated among 1,098 horses in Korea using the hemagglutination inhibition (HI) assay. The equine influenza viruses, A/equine/South Africa/4/03 (H3N8) and A/equine/Wildeshausen/1/08 (H3N8), were used as antigens in the HI assay. The mean seropositive rates were 91.7% (geometric mean antibody levels (GMT), 56.8) and 93.6% (GMT, 105.2) for A/equine/South Africa/4/03 and A/equine/Wildeshausen/1/08, respectively. Yearlings and two-year-olds in training exhibited lower positive rates (68.1% (GMT, 14) and 61.7% (GMT, 11.9), respectively, with different antigens) than average. Horses two years old or younger may require more attention in vaccination against equine influenza according to the vaccination regime, because they could be a target of the equine influenza virus.

  18. Climate Impacts of Geoengineering in a Delayed Mitigation Scenario

    NASA Astrophysics Data System (ADS)

    Tilmes, S.; Sanderson, B. M.; O'Neill, B. C.

    2016-12-01

    Decarbonization in the immediate future is required to limit global mean temperature (GMT) increase to 2 degrees C relative to pre-industrial conditions, if geoengineering is not considered. Here we use the Community Earth System Model (CESM) to investigate climate outcomes if no mitigation is undertaken until GMT has reached 2 degree C. We find that late decarbonization (LD) in CESM without applying stratospheric sulfur injection (SSI) leads to a peak temperature increase of 3 degree C and GMT remains above 2 degrees for 160 years. An additional gradual increase and then decrease of SSI over this period reaching about 1.5 times the aerosol burden resulting from the Mt Pinatubo eruption in 1992 would limit the increase in GMT to 2.0 degrees for the specific pathway and model. SSI produces mean and extreme temperatures in CESM comparable to an early decarbonization pathway, but aridity is not mitigated to the same extent.

  19. Group music therapy for severe mental illness: a randomized embedded-experimental mixed methods study.

    PubMed

    Grocke, D; Bloch, S; Castle, D; Thompson, G; Newton, R; Stewart, S; Gold, C

    2014-08-01

    Music therapy is an innovative approach to support people with severe mental illness (SMI). The aim of the study was to determine whether group music therapy (GMT) positively impacted on quality of life (QoL), social enrichment, self-esteem, spirituality and psychiatric symptoms of participants with SMI and how they experienced the intervention. The primary outcome was QoL; secondary measures assessed social enrichment, self-esteem, spirituality and psychiatric symptoms. The 13-week intervention comprised singing familiar songs and composing original songs recorded in a professional studio. Qualitative data were generated from focus group interviews and song lyric analysis. Ninety-nine adults (57 female) were recruited, with an initial cohort (n = 75) randomized to either: weekly GMT followed by standard care (SC) or SC followed by GMT. Crossover occurred after 13 weeks. Measures were conducted at baseline, 13, 26 and 39 weeks. A second cohort (n = 24) could not be randomized and were assigned to GMT followed by SC. Intention-to-treat analysis showed a significant difference between GMT and SC on QoL and spirituality. This was robust to different assumptions about missing data (listwise deletion, last observation carried forward or multiple imputation). Per-protocol analysis suggested greater benefit for those receiving more sessions. Focus group interview and song lyric analyses suggested that GMT was enjoyable; self-esteem was enhanced; participants appreciated therapists and peers; and although challenges were experienced, the programme was recommended to others. Group music therapy may enhance QoL and spirituality of persons with SMI. © 2013 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  20. Computational fluid dynamics modeling and analysis for the Giant Magellan Telescope (GMT)

    NASA Astrophysics Data System (ADS)

    Ladd, John; Slotnick, Jeffrey; Norby, William; Bigelow, Bruce; Burgett, William

    2016-08-01

    The Giant Magellan Telescope (GMT) is planned for construction at a summit of Cerro Las Campanas at the Los Campanas Observatory (LCO) in Chile. GMT will be the most powerful ground-based telescope in operation in the world. Aero-thermal interactions between the site topography, enclosure, internal systems, and optics are complex. A key parameter for optical quality is the thermal gradient between the terrain and the air entering the enclosure, and how quickly that gradient can be dissipated to equilibrium. To ensure the highest quality optical performance, careful design of the telescope enclosure building, location of the enclosure on the summit, and proper venting of the airflow within the enclosure is essential to minimize the impact of velocity and temperature gradients in the air entering the enclosure. High-fidelity Reynolds-Averaged Navier Stokes (RANS) Computational Fluid Dynamics (CFD) analysis of the GMT, enclosure, and LCO terrain is performed to study (a) the impact of either an open or closed enclosure base soffit external shape design, (b) the effect of telescope/enclosure location on the mountain summit, and (c) the effect of enclosure venting patterns. Details on the geometry modeling, grid discretization, and flow solution are first described. Then selected computational results are shown to quantify the quality of the airflow entering the GMT enclosure based on soffit, site location, and venting considerations. Based on the results, conclusions are provided on GMT soffit design, site location, and enclosure venting. The current work is not used to estimate image quality but will be addressed in future analyses as described in the conclusions.

  1. Gating modifier toxins isolated from spider venom: modulation of voltage-gated sodium channels and the role of lipid membranes.

    PubMed

    Agwa, Akello J; Peigneur, Steve; Chow, Chun Yuen; Lawrence, Nicole; Craik, David J; Tytgat, Jan; King, Glenn F; Henriques, Sonia Troeira; Schroeder, Christina I

    2018-04-27

    Gating modifier toxins (GMTs) are venom-derived peptides isolated from spiders and other venomous creatures that modulate activity of disease-relevant voltage-gated ion channels and are therefore being pursued as therapeutic leads. The amphipathic surface profile of GMTs has prompted the proposal that some GMTs simultaneously bind to the cell membrane and voltage-gated ion channels in a trimolecular complex. Here we examined whether there is a relationship among spider GMT amphipathicity, membrane binding and potency or selectivity for voltage-gated sodium (NaV) channels. We used NMR spectroscopy and in silico calculations to examine the structures and physicochemical properties of a panel of nine GMTs and deployed surface plasmon resonance to measure GMT affinity for lipids putatively found in proximity to NaV channels. Electrophysiology was used to quantify GMT activity on NaV1.7, an ion channel linked to chronic pain. Selectivity of the peptides was further examined against a panel of NaV channel subtypes. We show that GMTs adsorb to the outer leaflet of anionic lipid bilayers through electrostatic interactions. We did not observe a direct correlation between GMT amphipathicity and affinity for lipid bilayers. Furthermore, GMT-lipid bilayer interactions did not correlate with potency or selectivity for NaVs. We therefore propose that increased membrane binding is unlikely to improve subtype selectivity and that the conserved amphipathic GMT surface profile is an adaptation that facilitates simultaneous modulation of multiple NaVs. Published under license by The American Society for Biochemistry and Molecular Biology, Inc.

  2. GMT/local-time conversion chart

    NASA Technical Reports Server (NTRS)

    Creveling, C. J.

    1968-01-01

    GMT/local-time conversion is made by a longitude pocket instrument that automatically indicates desired information by simply manipulating the moveable portion of the instrument in accordance with a set of simple instructions imprinted on the reverse side of the instrument.

  3. [A survey of levels of antibodies against influenza viruses in the population of Wuxi City].

    PubMed

    You, Feng-Xing; Sun, Na; Ma, Guang-Yuan; Wang, Miao-Miao; Sa, Dan; Shi, Chao; Wu, Jia-Lin; Lin, Xia; Xiao, Yong; Qian, Yan-Hua; Jiang, Yong; Xie, Jie; Ji, Ya-Yong; Guan, Hong-Xia

    2011-10-01

    To investigate levels of antibodies against type A and type C influenza viruses and those against the 2009 H1N1 influenza A virus (before and after the 2009 H1N1 pandemic) among residents in Wuxi. To compare levels of antibodies against the 2009 H1N1 influenza virus (one year after the pandemic) in the unvaccinated population with those in the population who received vaccine. Serum samples were collected from subjects (aged 1-60 years) during September 2008 to May 2009, and during September 2010 to January 2011. Also collected were serum samples from adults who had received vaccines for pandemic (H1N1) 2009 for one year. Antibody response to influenza viruses was measured using hemagglutination inhibition (HI) assay. Seropositivity rate, seroprotection rate and geometric mean titer (GMT) were compared for each age group during different periods. Before the outbreak of the 2009 H1N1 pandemic, seropositivity rate, seroprotection rate and GMT among the study subjects in were 2.86% (4/140), 0.71% (1/140) and 5.23, respectively. One year after the outbreak, seropositivity rate, seroprotection rate and GMT among the study subjects were 66.33%, 37.76% and 19.17, respectively. Among them, adult subjects showed 50.00% seropositivity rate, 19.44% seroprotection rate and 13.09 GMT, while adult subjects who had received vaccine for one year showed 61.36% seropositivity rate, 22.73% seroprotection rate and 14.14 GMT. No significant difference was observed between these two populations (P > 0.05 for all three indexes). Furthermore, before the outbreak of the 2009 H1N1 pandemic, levels of antibodies against seasonal influenza viruses among the study subjects were as follows: for H1N1 virus, seropositivity rate, seroprotection rate and GMT were 55.00%, 35.00% and 16.90, respectively; for H3N2 virus, seropositivity rate, seroprotection rate and GMT were 86.40%, 84.30% and 58.56, respectively. One year after the 2009 H1N1 influenza A virus had spread to Wuxi, the population levels of antibodies against this virus have approached those against seasonal influenza viruses, as reflected by seropositivity rates, seroproection rates and GMT. Moreover, considerable levels of antibodies against seasonal influenza viruses were observed in populations, indicating no seasonal influenza outbreak would occur recently.

  4. Gelatinous Marrow Transformation Associated with Imatinib: Case Report and Literature Review

    PubMed Central

    Jiang, B.; Yellapragada, S.; Thiagarajan, P.

    2017-01-01

    Gelatinous marrow transformation (GMT) is a rare condition observed in severe illness or malnutrition, in which the bone marrow contains amorphous “gelatinous” extracellular material, and histopathology demonstrates varied degrees of fat cell atrophy and loss of hematopoietic elements. An association of GMT with imatinib use in chronic myeloid leukemia (CML) has been reported recently. The objective of this study is to describe a case of GMT associated with imatinib use and review the existing similar cases in the literature to identify epidemiological patterns and potential imatinib-induced mechanisms leading to gelatinous conversion. PMID:28133556

  5. A dispersed fringe sensor prototype for the Giant Magellan Telescope

    NASA Astrophysics Data System (ADS)

    Frostig, Danielle; McLeod, Brian A.; Kopon, Derek

    2017-01-01

    The Giant Magellan Telescope (GMT) will employ seven 8.4m primary mirror segments and seven 1m secondary mirror segments to achieve the diffraction limit of a 25.4m aperture. One challenge of the GMT is keeping the seven pairs of mirror segments in phase. We present a conceptual opto mechanical design for a prototype dispersed fringe sensor. The prototype, which operates at J-band and incorporates an infrared avalanche photodiode array, will be deployed on the Magellan Clay Telescope to verify the sensitivity and accuracy of the planned GMT phasing sensor.

  6. Loss of Inositol Phosphorylceramide Sphingolipid Mannosylation Induces Plant Immune Responses and Reduces Cellulose Content in Arabidopsis

    DOE PAGES

    Fang, Lin; Ishikawa, Toshiki; Rennie, Emilie A.; ...

    2016-11-28

    Glycosylinositol phosphorylceramides (GIPCs) are a class of glycosylated sphingolipids found in plants, fungi, and protozoa. These lipids are abundant in the plant plasma membrane, forming ~25% of total plasma membrane lipids. Little is known about the function of the glycosylated headgroup, but two recent studies have indicated that they play a key role in plant signaling and defense. Here, we show that a member of glycosyltransferase family 64, previously named ECTOPICALLY PARTING CELLS1, is likely a Golgi-localized GIPC-specific mannosyl-transferase, which we renamed GIPC MANNOSYL-TRANSFERASE1 (GMT1). Sphingolipid analysis revealed that the Arabidopsis thaliana gmt1 mutant almost completely lacks mannose-carrying GIPCs. Heterologousmore » expression of GMT1 in Saccharomyces cerevisiae and tobacco (Nicotiana tabacum) cv Bright Yellow 2 resulted in the production of non-native mannosylated GIPCs. gmt1 displays a severe dwarfed phenotype and a constitutive hypersensitive response characterized by elevated salicylic acid and hydrogen peroxide levels, similar to that we previously reported for the Golgi-localized, GIPC-specific, GDP-Man transporter GONST1 (Mortimer et al., 2013). Unexpectedly, we show that gmt1 cell walls have a reduction in cellulose content, although other matrix polysaccharides are unchanged.« less

  7. Assessing sex assignment concordance with genotype and phenotype.

    PubMed

    Suresh, Deepa; Crawford, Jessica; Axelrad, Marni E; Gunn, Sheila K; McCullough, Laurence; Smith, O' Brian; Sutton, Vernon R; Roth, David; Karaviti, Lefkothea P; Dietrich, Jennifer E

    2013-03-14

    To catalogue patients with DSD and to assess the concordance of genotype and phenotype with sex assignment at birth compared to sex assignment before and following assessment by a Gender Medicine Team (GMT) at one institution, as an initial step in formulating standardized guidelines for management of these conditions. After obtaining IRB approval, a retrospective chart review was conducted patients seen in the Gender Medicine Clinic (GMC) between 2006-2009 at Texas Children's Hospital (TCH), Houston, Texas. McNemar's test and Kappa agreement provided associations of various factors with sex assignment at birth prior to GMT assessment and after GMT assessment. Forty-seven patients seen in the GMC with confirmed DSD. Forty-seven patients met the inclusion criteria. The mean age of the patients at the time of GMT evaluation was 9.1+/-6.1 years; 61.7% had male karyotype, and 38.3% had female karyotype; 51.1% had a male external phenotype, 42.6% had a female external phenotype, and 6.4% had phenotypic ambiguity. Sex assignment was concordant with genotype and phenotype in 63.8% and 86.4%, respectively of cases at the time of birth and in 76.6% and 97.7%, respectively, of cases after assessment by GMT. Long-term outcomes are needed to establish standardized practice guidelines for decision-making.

  8. Short-term stability of T1 and T2 relaxation measures in multiple sclerosis normal appearing white matter.

    PubMed

    Liang, Alice L W; Vavasour, Irene M; Mädler, Burkhard; Traboulsee, Anthony L; Lang, Donna J; Li, David K B; MacKay, Alex L; Laule, Cornelia

    2012-06-01

    The presence of diffuse and widespread abnormalities within the 'normal appearing' white matter (NAWM) of multiple sclerosis (MS) brain has been established. T(1) histogram analysis has revealed increased T(1) (related to water content) in segmented NAWM, while quantitative assessment of T(2) relaxation measures has demonstrated decreased myelin water fraction (MWF, related to myelin content) and increased geometric mean T(2) (GMT(2)) of the intra/extracellular water pool. Previous studies with follow-up periods of 1-5 years have demonstrated longitudinal changes in T(1) histogram metrics over time; however, longitudinal changes in MWF and GMT(2) of segmented NAWM have not been examined. We examined the short-term evolution of MWF, GMT(2) and T(1) in MS NAWM based on monthly scanning over 6 months in 18 relapsing remitting (RR) MS subjects. Histogram metrics demonstrated short-term stability of T(1), MWF and remitting (RR) MS subjects. We observed no change in MWF, GMT(2) or T(1) histogram metrics in NAWM in RRMS over the course of 6 months. Longer follow-up periods may be required to establish demonstrable changes in NAWM based on of MWF, GMT(2) and T(1) metrics.

  9. Goal Management Training improves everyday executive functioning for persons with spina bifida: self-and informant reports six months post-training.

    PubMed

    Stubberud, Jan; Langenbahn, Donna; Levine, Brian; Stanghelle, Johan; Schanke, Anne-Kristine

    2014-01-01

    Executive dysfunction accounts for significant disability for many patients with spina bifida (SB), thus indicating the need for effective interventions aimed at improving executive functioning in this population. Goal Management Training™ (GMT) is a cognitive rehabilitation approach that targets disorganised behaviour resulting from executive dysfunction, and has received empirical support in studies of other patient groups. The purpose of this study was to determine if GMT would lead to perceived improved executive functioning in the daily lives of patients with SB, as evidenced by reduced report of dysexecutive problems in daily life on self- and informant questionnaires. Thirty-eight adults with SB were included in this randomised controlled trial (RCT). Inclusion was based upon the presence of executive functioning complaints. Experimental subjects (n = 24) received 21 hours of GMT, with efficacy of GMT being compared to results of subjects in a wait-list condition (n = 14). All subjects were assessed at baseline, post-intervention, and at six-month follow-up. Self-report measures indicated that the GMT group's everyday executive functioning improved significantly after training, lasting at least 6 months post-treatment. There were no significant effects on informant-report questionnaires. Overall, these findings indicate that executive difficulties in everyday life can be ameliorated for individuals with congenital brain dysfunction.

  10. [Effect of Guanmaitong Tablet on ERK and p38 Protein of TLR2 Pathway Expression in Cerebral Ischemia/Reperfusion Rats: an Experimental Study].

    PubMed

    Zhang, Cui-xiang; Liu, Jian-xun; Li, Dan; Li, Lei; Fu, Jian-hua; Hou, Jin-cai; Du, Xue-mei; Zhang, Fa-chang

    2015-06-01

    To explore the inflammatory cascade mechanism through Toll like receptor 2 (TLR2) pathway after cerebral ischemia/reperfusion, and to study molecular mechanisms of Guanmaitong (GMT) Tablet for protecting brain damage. We used bolt-line method to block/release the middle cerebral artery, causing cerebral ischemia/reperfusion (I/R) injury model. GMT Tablet was given by gastrogavage. Rats were then divided into the high dose GMT group (1200 mg/kg), the middle dose GMT group (600 mg/kg), the low dose GMT group (300 mg/kg), the positive control group (Tanakan, 20 mg/kg). Their right brain tissues were fixed in 10% neutral formalin. TLR2 expressions were detected by immunofluorescence staining. The total protein was extracted from right brain tissues by ultrasonica- tion. Expression levels of extracellular regulated protein kinases (ERK), phospho-extracellular regulated protein kinases (p-ERK), p38-mitogen activated protein kinases (p-ERK), phospho-p38-mitogen activated protein kinases [p-p38-MAPKs(p-p38)] were assessed by Western blot. Abdominal aortic blood was withdrawn. IL-6 and IL-1β levels were detected by ELISA in brain tissues and serum. Compared with the sham-oepration group, expression levels of TLR2, ERK, p-ERK, p38, p-p38 protein were up-regulated (P < 0.05, P < 0.01), and contents of IL-6 and IL-1β in brain tissues and serum were increased in the model group (P < 0.01). Expression levels of TLR2, ERK, p-ERK, p38, p-p38 were down-regulated (P < 0.05, P < 0.01), and contents of IL-6 and IL-1β were reduced in brain tissues and serum in middle and high dose GMT groups (P < 0.05, P < 0.01). TLR2 pathway was involved in cerebral I/R injury. GMT protected neurons by down-regulating protein expressions of TLR2, ERK, p-ERK, p38, p-p38 and contents of IL-1β and IL-6.

  11. JPRS Report, Proliferation Issues

    DTIC Science & Technology

    1992-03-03

    Moscow TASS in English 0856 GMT 1410 GMT 19 Feb 92 14 Feb 92 [Transmitted via KYODO] [By ITAR-TASS correspondent Sergey Kuznetsov ] [Text] Lieutenant...would be at variance with its pledges under the terms of nalist Oleg Andriyashkin, author of the information in the recent agreement on joint measures

  12. Effect of carbohydrate restriction in patients with hyperinsulinemic hypoglycemia after Roux-en-Y gastric bypass.

    PubMed

    Botros, Nadia; Rijnaarts, Iris; Brandts, Hans; Bleumink, Gysele; Janssen, Ignace; de Boer, Hans

    2014-11-01

    Hyperinsulinemic hypoglycemia is a rare complication of Roux-en-Y gastric bypass (RYGB) surgery. Meals with a high carbohydrate (carb) content and high glycemic index (GI) may provoke these hypoglycemic attacks. The aim of this study is to assess the effects of reducing meal carb content and GI on glycemic responses in patients with post-RYGB hypoglycemia. Fourteen patients with post-RYGB hypoglycemia underwent two meal tests: a mixed meal test (MMT) with a carb content of 30 g and a meal test with the low GI supplement, Glucerna SR 1.5® (Glucerna meal test (GMT)). Plasma glucose and serum insulin levels were measured for a period of 6 h. Peak glucose levels were reached at T 30 during GMT and at T 60 during MMT, and they were 1.5 ± 0.3 mmol/L lower during GMT than during MMT (7.5 ± 0.4 vs 9.0 ± 0.4 mmol/L, P < 0.005). GMT induced the most rapid rise in plasma insulin: at T 30 plasma, insulin was 30.7 ± 8.5 mU/L higher during GMT than during MMT (P < 0.005). None of the carb-restricted meals induced post-prandial hypoglycemia. A 30-g carb-restricted meal may help to prevent post-prandial hypoglycemia in patients with post-RYGB hypoglycemia. The use of a liquid, low GI, supplement offers no additional advantage.

  13. Translations on North Korea, Number 552

    DTIC Science & Technology

    1977-09-19

    KCNA in English 0337 GMT 31 Aug 77 SK] ECUADOREAN PUBLISHER LEAVES—Pyongyang, 29 August—Humberto Ortiz Flores, director of the " Voluntad " publishing...steady rise.[Pyongyang KCNA in English 1530 GMT 26 Aug 77 OW] ECUADOR PUBLISHER—Humberto Ortiz Flores, director of the " Voluntad " publishing house

  14. Large 0/12 GMT Differences of US Vaisala RS80 Observations

    NASA Technical Reports Server (NTRS)

    Atlas, Robert (Technical Monitor)

    2002-01-01

    Large differences been observations taken at 0 and 12 GMT have been revealed during routine monitoring of observations at the Data Assimilation Office (DAO) at NASA's Goddard Space Flight Center (GSFC). As a result, an investigation has been conducted to confirm the large differences and isolate its source. The data clearly shows that 0/12 GMT differences are largely artificial especially over the central US and that the differences largely originate in the post processing software at the observing stations. In particular, the release time of the rawinsonde balloon may be misspecified to be the synoptic time which would lead to the miscalculation of the bias correction that accounts for solar radiation effects on the thermistor.

  15. InSAR Maps of Deformation Covering Raft River, Idaho from 2007 to 2010

    DOE Data Explorer

    Reinisch, Elena C. (ORCID:0000000252211921)

    2007-03-11

    This dataset contains maps of deformation covering Raft River, Idaho from 2007 to 2010 calculated from interferometric synthetic aperture radar data. This dataset is used in the study entitled "Inferring geothermal reservoir processes at the Raft River Geothermal Field, Idaho, USA through modeling InSAR-measured surface deformation" by F. Liu, et al. This dataset was derived from raw SAR data from the Envisat satellite missions operated by the European Space Agency (ESA) that are copyrighted by ESA and were provided through the WInSAR consortium at the UNAVCO facility. All pair directories use the image acquired on 3/11/2007 as a reference image. To view specific information for each grd file, please use the GMT command "grdinfo" - e.g., for grd file In20070311_20071111/drho_utm.grd, use terminal command: grdinfo In20070311_20071111/drho_utm.grd

  16. Permanent Neutrality and the Panama Canal after 1999

    DTIC Science & Technology

    1989-03-31

    Circuito RPC Television, 2!25 GMT 18 JAN 89, as r-eported by FE_ Latin America, 19 January 1989, p. 21. 12. "FDF Captains Reiterate Support for Norieoa...1973. 10. Circuito RPC Television. 2325 GMT, 18 January 1989. Reported by FBIS, Latin America, 19 January 1989. 11. "FDP Captains Reiterate Support

  17. Comparing the model-simulated global warming signal to observations using empirical estimates of unforced noise

    USDA-ARS?s Scientific Manuscript database

    The comparison of observed global mean surface air temperature (GMT) change to the mean change simulated by climate models has received much attention. For a given global warming signal produced by a climate model ensemble, there exists an envelope of GMT values representing the range of possible un...

  18. A multi-model analysis of risk of ecosystem shifts under climate change

    NASA Astrophysics Data System (ADS)

    Warszawski, Lila; Friend, Andrew; Ostberg, Sebastian; Frieler, Katja; Lucht, Wolfgang; Schaphoff, Sibyll; Beerling, David; Cadule, Patricia; Ciais, Philippe; Clark, Douglas B.; Kahana, Ron; Ito, Akihiko; Keribin, Rozenn; Kleidon, Axel; Lomas, Mark; Nishina, Kazuya; Pavlick, Ryan; Tito Rademacher, Tim; Buechner, Matthias; Piontek, Franziska; Schewe, Jacob; Serdeczny, Olivia; Schellnhuber, Hans Joachim

    2013-12-01

    Climate change may pose a high risk of change to Earth’s ecosystems: shifting climatic boundaries may induce changes in the biogeochemical functioning and structures of ecosystems that render it difficult for endemic plant and animal species to survive in their current habitats. Here we aggregate changes in the biogeochemical ecosystem state as a proxy for the risk of these shifts at different levels of global warming. Estimates are based on simulations from seven global vegetation models (GVMs) driven by future climate scenarios, allowing for a quantification of the related uncertainties. 5-19% of the naturally vegetated land surface is projected to be at risk of severe ecosystem change at 2 ° C of global warming (ΔGMT) above 1980-2010 levels. However, there is limited agreement across the models about which geographical regions face the highest risk of change. The extent of regions at risk of severe ecosystem change is projected to rise with ΔGMT, approximately doubling between ΔGMT = 2 and 3 ° C, and reaching a median value of 35% of the naturally vegetated land surface for ΔGMT = 4 °C. The regions projected to face the highest risk of severe ecosystem changes above ΔGMT = 4 °C or earlier include the tundra and shrublands of the Tibetan Plateau, grasslands of eastern India, the boreal forests of northern Canada and Russia, the savanna region in the Horn of Africa, and the Amazon rainforest.

  19. The GMT-Consortium Large Earth Finder (G-CLEF): an optical Echelle spectrograph for the Giant Magellan Telescope (GMT)

    NASA Astrophysics Data System (ADS)

    Szentgyorgyi, Andrew; Baldwin, Daniel; Barnes, Stuart; Bean, Jacob; Ben-Ami, Sagi; Brennan, Patricia; Budynkiewicz, Jamie; Chun, Moo-Young; Conroy, Charlie; Crane, Jeffrey D.; Epps, Harland; Evans, Ian; Evans, Janet; Foster, Jeff; Frebel, Anna; Gauron, Thomas; Guzmán, Dani; Hare, Tyson; Jang, Bi-Ho; Jang, Jeong-Gyun; Jordan, Andres; Kim, Jihun; Kim, Kang-Miin; Mendes de Oliveira, Claudia Mendes; Lopez-Morales, Mercedes; McCracken, Kenneth; McMuldroch, Stuart; Miller, Joseph; Mueller, Mark; Oh, Jae Sok; Onyuksel, Cem; Ordway, Mark; Park, Byeong-Gon; Park, Chan; Park, Sung-Joon; Paxson, Charles; Phillips, David; Plummer, David; Podgorski, William; Seifahrt, Andreas; Stark, Daniel; Steiner, Joao; Uomoto, Alan; Walsworth, Ronald; Yu, Young-Sam

    2016-08-01

    The GMT-Consortium Large Earth Finder (G-CLEF) will be a cross-dispersed, optical band echelle spectrograph to be delivered as the first light scientific instrument for the Giant Magellan Telescope (GMT) in 2022. G-CLEF is vacuum enclosed and fiber-fed to enable precision radial velocity (PRV) measurements, especially for the detection and characterization of low-mass exoplanets orbiting solar-type stars. The passband of G-CLEF is broad, extending from 3500Å to 9500Å. This passband provides good sensitivity at blue wavelengths for stellar abundance studies and deep red response for observations of high-redshift phenomena. The design of G-CLEF incorporates several novel technical innovations. We give an overview of the innovative features of the current design. G-CLEF will be the first PRV spectrograph to have a composite optical bench so as to exploit that material's extremely low coefficient of thermal expansion, high in-plane thermal conductivity and high stiffness-to-mass ratio. The spectrograph camera subsystem is divided into a red and a blue channel, split by a dichroic, so there are two independent refractive spectrograph cameras. The control system software is being developed in model-driven software context that has been adopted globally by the GMT. G-CLEF has been conceived and designed within a strict systems engineering framework. As a part of this process, we have developed a analytical toolset to assess the predicted performance of G-CLEF as it has evolved through design phases.

  20. Changes in crop yields and their variability at different levels of global warming

    NASA Astrophysics Data System (ADS)

    Ostberg, Sebastian; Schewe, Jacob; Childers, Katelin; Frieler, Katja

    2018-05-01

    An assessment of climate change impacts at different levels of global warming is crucial to inform the policy discussion about mitigation targets, as well as for the economic evaluation of climate change impacts. Integrated assessment models often use global mean temperature change (ΔGMT) as a sole measure of climate change and, therefore, need to describe impacts as a function of ΔGMT. There is already a well-established framework for the scalability of regional temperature and precipitation changes with ΔGMT. It is less clear to what extent more complex biological or physiological impacts such as crop yield changes can also be described in terms of ΔGMT, even though such impacts may often be more directly relevant for human livelihoods than changes in the physical climate. Here we show that crop yield projections can indeed be described in terms of ΔGMT to a large extent, allowing for a fast estimation of crop yield changes for emissions scenarios not originally covered by climate and crop model projections. We use an ensemble of global gridded crop model simulations for the four major staple crops to show that the scenario dependence is a minor component of the overall variance of projected yield changes at different levels of ΔGMT. In contrast, the variance is dominated by the spread across crop models. Varying CO2 concentrations are shown to explain only a minor component of crop yield variability at different levels of global warming. In addition, we find that the variability in crop yields is expected to increase with increasing warming in many world regions. We provide, for each crop model, geographical patterns of mean yield changes that allow for a simplified description of yield changes under arbitrary pathways of global mean temperature and CO2 changes, without the need for additional climate and crop model simulations.

  1. IMPACT OF GLUCOSE MANAGEMENT TEAM ON OUTCOMES OF HOSPITALIZARON IN PATIENTS WITH TYPE 2 DIABETES ADMITTED TO THE MEDICAL SERVICE.

    PubMed

    Wang, Yunjiao J; Seggelke, Stacey; Hawkins, R Matthew; Gibbs, Joanna; Lindsay, Mark; Hazlett, Ingrid; Low Wang, Cecilia C; Rasouli, Neda; Young, Kendra A; Draznin, Boris

    2016-12-01

    To improve glycemic control of hospitalized patients with diabetes and hyperglycemia, many medical centers have established dedicated glucose management teams (GMTs). However, the impact of these specialized teams on clinical outcomes has not been evaluated. We conducted a retrospective study of 440 patients with type 2 diabetes admitted to the medical service for cardiac or infection-related diagnosis. The primary endpoint was a composite outcome of several well-recognized markers of morbidity, consisting of: death during hospitalization, transfer to intensive care unit, initiation of enteral or parenteral nutrition, line infection, new in-hospital infection or infection lasting more than 20 days of hospitalization, deep venous thrombosis or pulmonary embolism, rise in plasma creatinine, and hospital re-admissions. Medical housestaff managed the glycemia in 79% of patients (usual care group), while the GMT managed the glycemia in 21% of patients (GMT group). The primary outcome was similar between cohorts (0.95 events per patient versus 0.99 events per patient in the GMT and usual care cohorts, respectively). For subanalysis, the subjects in both groups were stratified into those with average glycemia of <180 mg/dL versus those with glycemia >180 mg/dL. We found a significant beneficial impact of glycemic management by the GMT on the composite outcome in patients with average glycemia >180 mg/dL during their hospital stay. The number of patients who met primary outcome was significantly higher in the usual care group (40 of 83 patients, 48%) than in the GMT-treated cohort (8 of 33 patients, 25.7%) (P<.02). Our data suggest that GMTs may have an important role in managing difficult-to-control hyperglycemia in the inpatient setting. BG = blood glucose GMT = glucose management team HbA1c = hemoglobin A1c ICU = intensive care unit POC = point of care T2D = type 2 diabetes.

  2. [Analysis for protection rate and antibody levels of epidemic cerebrospinal meningitis among children aged between 3-23 months in Liuzhou, in 2012].

    PubMed

    Cui, X L; Wu, X; Li, M Q

    2016-12-06

    Objective: To understand the level of bactericidal antibodies against Neisseria meningitidis and their rate of protection in children aged between 3 and 23 months, in Liuzhou, in 2012. Methods: Convenience sampling was performed in Liujiang, Rong'an and Sanjiang Counties from May through August, 2012. The inclusion criteria for 603 subjects were: Children aged between 3 and 23 months; no history of meningococcal meningitis; no vaccination against Neisseria meningitidis serogroup C; more than 30 days from the last vaccination against Neisseria meningitidis serogroup A. Demographic information and immunization history of the subjects were obtained using questionnaires. Venous blood samples (2.0 ml each) were collected and levels of Neisseria meningitides antibodies determined using a Serum Bactericidal Assay (SBA). The geometric mean titer (GMT) of serum bacterial antibodies was positive when it was greater than or equal to 1∶2 and protective when greater than 1∶8. Chi-square and Fisher's exact tests were used to compare differences in the positive and protective rates of serum antibodies of Neisseria meningitidis serogroup A and Neisseria meningitidis serogroup C, among children with different demographic characteristics. Kruskal-Wallis H test was used to compare differences in the GMT of serum antibodies of Neisseria meningitidis serogroup A and Neisseria meningitidis serogroup C, among children with different demographic characteristics. Results: Of 603 subjects, 325 (53.9%) were female and 278 (46.1%) were male; 276 (45.8%), 143 (23.7%) and 184 (30.5%) subjects were administered, respectively, no treatment, 1 dose vaccine and 2 doses vaccine. The GMT of serum antibodies against group A Neisseria meningitidis was 1∶1.11, the positive rate was 7.6% (46) and the protective rate was 2.0% (12). The GMT of antibodies in children receiving 1 vaccine dose was 1∶1.16 and the protective rate was 3.5% (5), both values higher than those in children receiving 2 vaccine doses (GMT: 1∶1.2, protective rate: 3.5% (5)). However, these differences were not statistically significant (GMT: H =0.64, P= 0.728; protective rate: Fisher's exact test, P= 0.080). The GMT of antibodies in children receiving 1 and 2 doses of meningococcal polysaccharide vaccines were 1∶1.12 and 1∶2.30, respectively (≤180 d). The GMT of serum antibodies for group C meningococcal vaccine was 1∶1.18 and its positive and protective rates were 14.6% (88) and 2.2% (13), respectively. Conclusion: Children aged between 3 and 23 months are susceptible to Neisseria meningitidis groups A and C. The immune effectiveness of group A meningococcal polysaccharide vaccine is relatively poor in this age group and their antibody levels decreased rapidly.

  3. 78 FR 57665 - Sunshine Act Meeting

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-09-19

    ... NATIONAL COUNCIL ON DISABILITY Sunshine Act Meeting TIME AND DATES: The Members of the National Council on Disability (NCD) will hold a quarterly meeting on Monday, October 7, 9:00 a.m.-5:15 p.m. (GMT), and Tuesday, October 8, 2013, 9:00 a.m.-12:15 p.m. (GMT). PLACE: The meeting will occur in Topeka...

  4. Deletion of Aspergillus nidulans GDP-mannose transporters affects hyphal morphometry, cell wall architecture, spore surface character, cell adhesion, and biofilm formation.

    PubMed

    Kadry, Ashraf A; El-Ganiny, Amira M; Mosbah, Rasha A; Kaminskyj, Susan G W

    2018-07-01

    Systemic human fungal infections are increasingly common. Aspergillus species cause most of the airborne fungal infections. Life-threatening invasive aspergillosis was formerly found only in immune-suppressed patients, but recently some strains of A. fumigatus have become primary pathogens. Many fungal cell wall components are absent from mammalian systems, so they are potential drug targets. Cell-wall-targeting drugs such as echinocandins are used clinically, although echinocandin-resistant strains were discovered shortly after their introduction. Currently there are no fully effective anti-fungal drugs. Fungal cell wall glycoconjugates modulate human immune responses, as well as fungal cell adhesion, biofilm formation, and drug resistance. Guanosine diphosphate (GDP) mannose transporters (GMTs) transfer GDP-mannose from the cytosol to the Golgi lumen prior to mannosylation. Aspergillus nidulans GMTs are encoded by gmtA and gmtB. Here we elucidate the roles of A. nidulans GMTs. Strains engineered to lack either or both GMTs were assessed for hyphal and colonial morphology, cell wall ultrastructure, antifungal susceptibility, spore hydrophobicity, adherence and biofilm formation. The gmt-deleted strains had smaller colonies with reduced sporulation and with thicker hyphal walls. The gmtA deficient spores had reduced hydrophobicity and were less adherent and less able to form biofilms in vitro. Thus, gmtA not only participates in maintaining the cell wall integrity but also plays an important role in biofilm establishment and adherence of A. nidulans. These findings suggested that GMTs have roles in A. nidulans growth and cell-cell interaction and could be a potential target for new antifungals that target virulence determinants.

  5. Wind profiler data in a mesoscale experiment from a meteorological perspective

    NASA Technical Reports Server (NTRS)

    Zipser, E. J.; Augustine, J.; Cunning, J.

    1986-01-01

    During May and June of 1985, the Oklahoma-Kansas Preliminary Regional Experiment of STORM-Central (OK PRE-STORM) was carried out, with the major objectives of learning more about mesoscale convective systems (MCSs) and gaining experience in the use of new sensing systems and measurement strategies that will improve the design of STORM-Central. Three 50-MHz wind profilers were employed in a triangular array with sides about 275 km. It is far too soon to report any results of this effort, for it has barely begun. The purpose here is to show some examples of the data, some of the surrounding conventional data, and to discuss some of the issues important to meteorologists in evaluating the contribution of the profiler data. The case of 10 to 11 June 1985, featuring a major squall line system which crossed the dense observing network from northwest to southeast, passing the Liberal site about 2230 GMT/10 June, the McPherson site about 0100 GMT/11 June, and Wichita about 0300 GMT/11 June is discussed. Radar and satellite data show that the system was growing rapidly when it passed Liberal, and was large and mature when it passed through McPherson and Wichita. The radar depiction of the system during this stage is given, with the McPherson site in the intense convective echoes near the leading edge at 01 GMT and in the stratiform precipitation at 03 GMT. The profiler wind data for a 9-hour period encompassing the squall line passage at each site are given.

  6. GMTIFS: challenging optical design problems and their solutions for the GMT integral-field spectrograph

    NASA Astrophysics Data System (ADS)

    Hart, John; Bloxham, Gabe; Boz, Robert; Espeland, Brady; Sharp, Robert

    2016-08-01

    GMTIFS is a first generation instrument for the Giant Magellan Telescope (GMT). It is a combined Imager and Integral Field Spectrograph (IFS) designed to work with the Adaptive Optics (AO) Systems of the GMT. Working at the diffraction limit of the GMT and satisfying the challenging AO interface requirements and constraints results in unique optical challenges. We describe two of these challenges and how we have addressed them. The GMT has a direct feed architecture that maximizes transmission and reduces emissivity. This means that the cryostat window is tilted to reflect visual wavelengths to the external Visual Wave Front Subsystem (VWS). For a plane-parallel window, this tilt causes astigmatism in the transmitted beam that must be corrected. A corrective system using two plates, tilted and slightly wedged in opposite directions, is used. Geometry and performance of the system is described. Another challenging problem is the optical design of the anamorphic field projector. The Integral Field Unit of GMTIFS requires that a small field delivered to it be projected onto an Image Slicer at much larger scale, with the magnification in the spectral direction being twice that in the spatial direction so that the spaxels are square when referred to the sky. Output images must be coincident in the spectral and spatial projections in both the field and pupil domains. Additionally, field and pupil image locations must be independently controllable so that they can be made coincident for interchangeable units that provide a range of output field scales. A two-mirror system that satisfies these requirements is described.

  7. In vivo reprogramming of murine cardiac fibroblasts into induced cardiomyocytes

    PubMed Central

    Qian, Li; Huang, Yu; Spencer, C. Ian; Foley, Amy; Vedantham, Vasanth; Liu, Lei; Conway, Simon J.; Fu, Ji-dong; Srivastava, Deepak

    2012-01-01

    SUMMARY The reprogramming of adult cells into pluripotent cells or directly into alternative adult cell types holds great promise for regenerative medicine. We reported that cardiac fibroblasts, which represent 50% of the cells in the mammalian heart, can be directly reprogrammed to adult cardiomyocyte-like cells in vitro by the addition of Gata4, Mef2c and Tbx5 (GMT). Here, we use genetic lineage-tracing to show that resident non-myocytes in the murine heart can be reprogrammed into cardiomyocyte-like cells in vivo by local delivery of GMT after coronary ligation. Induced cardiomyocytes became bi-nucleate, assembled sarcomeres and had cardiomyocyte-like gene expression. Analysis of single cells revealed ventricular cardiomyocyte-like action potentials, beating upon electrical stimulation, and evidence of electrical coupling. In vivo delivery of GMT decreased infarct size and modestly attenuated cardiac dysfunction up to 3 months after coronary ligation. Delivery of the pro-angiogenic and fibroblast activating peptide, Thymosin β4, along with GMT, resulted in further improvements in scar area and cardiac function. These findings demonstrate that cardiac fibroblasts can be reprogrammed into cardiomyocyte-like cells in their native environment for potential regenerative purposes. PMID:22522929

  8. A comparison of 2 influenza vaccine schedules in 6- to 23-month-old children.

    PubMed

    Englund, Janet A; Walter, Emmanuel B; Fairchok, Mary P; Monto, Arnold S; Neuzil, Kathleen M

    2005-04-01

    Trivalent inactivated influenza vaccine (TIV) is recommended for all children ages 6 to 23 months. Delivering 2 doses of TIV at least 4 weeks apart to young children receiving this vaccine for the first time is challenging. We compared the immunogenicity and reactogenicity of the standard 2-dose regimen of TIV administered in the fall with an early schedule of a single spring dose followed by a fall dose of the same vaccine in healthy toddlers 6 to 23 months of age. Children were recruited in the spring to be randomized into either the standard or early schedule. An additional group was also enrolled in the fall as part of a nonrandomized standard comparison group. The 2002-2003 licensed TIV was administered in the spring; the fall 2003-2004 vaccine contained the same 3 antigenic components. Reactogenicity was assessed by parental diaries and telephone surveillance. Blood was obtained after the second dose of TIV for all children. The primary outcome measure was antibody response to influenza A/H1N1, A/H3N2, and B after 2 doses of vaccine, as determined by hemagglutination-inhibition titers > or =1:32 and geometric mean titer (GMT). Two hundred nineteen children were randomized to receive either the standard or early TIV schedule; 40 additional children were enrolled in the fall in the nonrandomized standard group. Response rates in the combined standard versus early groups were similar overall: 78% (GMT: 48) vs 76% (GMT: 57) to H1N1, 89% (GMT: 115) vs 88% (GMT: 129) to H3N2, and 52% (GMT: 24) vs 60% (GMT: 28) to B. Reactogenicity after TIV in both groups of children was minimal and did not differ by dose, age, or time between doses. Reaction rates were higher in those receiving TIV and concomitant vaccines compared with those receiving TIV alone. Overall rates of fever >38 degrees C axillary and injection-site pain, redness, or swelling were 5.4%, 3.1%, 0.9%, and 1.1%, respectively. When the spring and fall influenza vaccines had the same 3 antigenic components, the early vaccine schedule resulted in similar immunogenicity and reactogenicity compared with the standard schedule. When the vaccine components do not change between years, initiating influenza vaccine in the spring at the time of routine office visits would facilitate full immunization of children against influenza earlier in the season.

  9. 78 FR 69454 - Notice of Sunshine Act Meetings

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-11-19

    ... NATIONAL COUNCIL ON DISABILITY Notice of Sunshine Act Meetings TIME AND DATES: The Members of the National Council on Disability (NCD) will hold a quarterly meeting on Wednesday, December 4, 9:00 a.m.-5:15 p.m. (GMT), and Thursday, December 5, 2013, 9:00 a.m.-12:15 p.m. (GMT). PLACE: The meeting will occur in Topeka, Kansas at the Kansas State...

  10. Changeability of tissue's magnetic remanence after galvanic-magnetostimulation in upper-back pain treatment.

    PubMed

    Dyszkiewicz, Andrzej Jan; Kępiński, Paweł; Połeć, Paweł; Chachulski, Damian; Nowak-Kostrzewska, Ewa

    2015-11-01

    Research was conducted on parametric profiles of healthy subjects and patients with cervico-brachial pain syndrome resulting from C4/5 and/or C5/6 discopathy, including magnetic remanence of tissues in marker points 1-12 (L+R) and functional parameters, and their subsequent change after treatment in group A, using method of push-pull galvanic magnetostimulation (GMT 2.0). GMT 2.0 device, comprised of one air solenoid and three galvanic solenoids in electrolytic tubs, was designed for push-pull magnetostimulation of the head, coupled with simultaneous stimulation of the limbs. Clinical trial was conducted in Outpatient Private Clinic "VIS" under the auspices of Silesian Higher Medical School in Katowice, Poland. 55 subjects participated in the study: control group K consisted of 23 healthy individuals, whereas 33 patients in group A were treated using GMT 2.0. Only patients in group A were treated with GMT 2.0 during 40-min sessions over a period of 10 days. Parametric profile of the patients was defined using various measurements: electronic SFTR test (C-Th-shoulders), HR, RR, BDI and VAS tests, magnetic remanence in marker points 1-12 (L+R) and blood parameters: HB, ER, CREA, BIL, K(+), Na(+), Cl(-) Fe(2+), Ca(2+) and Mg(2+). There was a significant reduction in pain (VAS), increase in the range of motion (SFTR), lower depression symptoms (BDI), slower heart rate (HR), lower blood pressure (RR), greater concentration of Mg(2+), K(+), Ca(2+)ions and reduction in the concentration of BIL, CREA Fe(2+) after GMT 2.0 treatment in group A. Evaluation of magnetic remanence in marker points M1-12 (L+R) initially showed higher values in group K, which after treatment were normalized to values similar to those in group K. GMT 2.0 treatment in group A resulted in normalization of magnetic remanence, synergically with increased range of motion (SFTR test), decreased HR and RR parameters, smaller depressive trends (BDI test), as well as increased ion levels (K(+), Mg(2+), Ca(2+)) and better functional parameters of kidneys and liver. Copyright © 2015 Elsevier Ltd. All rights reserved.

  11. Group-based multicomponent treatment to reduce depressive symptoms in women with co-morbid psychiatric and psychosocial problems during pregnancy: A randomized controlled trial.

    PubMed

    Van Ravesteyn, Leontien M; Kamperman, Astrid M; Schneider, Tom A J; Raats, Monique E; Steegers, Eric A P; Tiemeier, Henning; Hoogendijk, Witte J G; Lambregtse-van den Berg, Mijke P

    2018-01-15

    Depressive symptoms in pregnant women, which are common and debilitating, are often co-morbid with other mental disorders (e.g. anxiety and personality disorders), and related to low socioeconomic status (SES). This situation may hamper treatment outcome, which has often been neglected in previous studies on the treatment of depression during pregnancy. We developed a new group-based multicomponent treatment (GMT) comprising cognitive behavioral therapy, psycho-education and body-oriented therapy and compared the effect on depressive symptoms with individual counseling (treatment as usual, TAU) in a heterogeneous group of pregnant women with co-morbid mental disorders and/or low SES. An outpatient sample from a university hospital of 158 pregnant women who met DSM-IV criteria for mental disorders were included and 99 participants were randomized to GMT or TAU from January 2010 until January 2013. The Edinburgh Depression Scale (EDS) was used at baseline, every 5 weeks during pregnancy and as the primary outcome measure of depressive symptoms at 6 weeks postpartum. Secondary outcome measures included the clinician-reported Hamilton Depression Rating Scale (HDRS), obstetric outcomes and a 'Patient Satisfaction' questionnaire. 155 participants were included the intention-to-treat (ITT)-analysis. GMT was not superior above TAU according to estimated EDS (β = 0.13, CI = - 0.46-0.71, p = 0.67) and HDRS scores (β = - 0.39, CI = - 0.82-0.05, p = 0.08) at 6 weeks postpartum. There were no differences in secondary outcomes between the GMT and TAU, nor between the randomized condition and patient-preference condition. The ability to detect an effect of GMT may have been limited by sample size, missing data and the ceiling effect of TAU. GMT is an acceptable treatment for a heterogeneous group of pregnant women with depressive symptoms and co-morbid mental disorders and/or low SES, but not superior to TAU. Further research should focus on understanding and treating co-morbid disorders and psychosocial problems during pregnancy. Dutch trial registry, www.trialregister.nl under reference number: NTR3015. Copyright © 2017 Elsevier B.V. All rights reserved.

  12. The opto-mechanical design of the GMT-consortium large earth finder (G-CLEF)

    NASA Astrophysics Data System (ADS)

    Mueller, Mark; Baldwin, Daniel; Bean, Jacob; Bergner, Henry; Bigelow, Bruce; Chun, Moo-Young; Crane, Jeffrey; Foster, Jeff; Fżrész, Gabor; Gauron, Thomas; Guzman, Dani; Hertz, Edward; Jordán, Andrés.; Kim, Kang-Min; McCracken, Kenneth; Norton, Timothy; Ordway, Mark; Park, Chan; Park, Sang; Podgorski, William A.; Szentgyorgyi, Andrew; Uomoto, Alan; Yuk, In-Soo

    2014-08-01

    The GMT-Consortium Large Earth Finder (G-CLEF) is a fiber fed, optical echelle spectrograph that has been selected as a first light instrument for the Giant Magellan Telescope (GMT) currently under construction at the Las Campanas Observatory in Chile's Atacama desert region. We designed G-CLEF as a general-purpose echelle spectrograph with precision radial velocity (PRV) capability used for exoplanet detection. The radial velocity (RV) precision goal of GCLEF is 10 cm/sec, necessary for detection of Earth-sized planets orbiting stars like our Sun in the habitable zone. This goal imposes challenging stability requirements on the optical mounts and the overall spectrograph support structures. Stability in instruments of this type is typically affected by changes in temperature, orientation, and air pressure as well as vibrations caused by telescope tracking. For these reasons, we have chosen to enclose G-CLEF's spectrograph in a thermally insulated, vibration isolated vacuum chamber and place it at a gravity invariant location on GMT's azimuth platform. Additional design constraints posed by the GMT telescope include: a limited space envelope, a thermal emission ceiling, and a maximum weight allowance. Other factors, such as manufacturability, serviceability, available technology and budget are also significant design drivers. All of the previously listed considerations must be managed while ensuring that performance requirements are achieved. In this paper, we discuss the design of G-CLEF's optical mounts and support structures including technical choices made to minimize the system's sensitivity to thermal gradients. A more general treatment of the properties of G-CLEF can be found elsewhere in these proceedings1. We discuss the design of the vacuum chamber which houses the irregularly shaped optical bench and optics while conforming to a challenging space envelope on GMT's azimuth platform. We also discuss the design of G-CLEF's insulated enclosure and thermal control systems which maintain the spectrograph at milli-Kelvin level stability while simultaneously limiting the maximum thermal emission into the telescope dome environment. Finally, we discuss G-CLEF's front-end assembly and fiber-feed system as well as other interface challenges presented by the telescope, enclosure and neighboring instrumentation.

  13. Safety and immunogenicity of different doses and schedules of a live attenuated tetravalent dengue vaccine (TDV) in healthy adults: A Phase 1b randomized study.

    PubMed

    Rupp, Richard; Luckasen, Gary Joseph; Kirstein, Judith Lee; Osorio, Jorge E; Santangelo, Joseph D; Raanan, Marsha; Smith, Mary Kathryn; Wallace, Derek; Gordon, Gilad S; Stinchcomb, Dan T

    2015-11-17

    A safe, effective dengue vaccine that can simultaneously induce immunity to all four dengue virus serotypes (DENV-1-4) is a public health priority. A chimeric tetravalent dengue vaccine (TDV) based on an attenuated DENV-2 serotype backbone was evaluated in healthy, flavivirus-seronegative adults. In this randomized, multicenter, Phase 1b study conducted in the United States, the safety and immunogenicity of TDV were evaluated in 140 participants aged 18-45 years in six dosing regimen study groups. Participants were injected subcutaneously on Days 0 and 90; placebo (saline) was injected where appropriate to maintain double blinding. Three different TDV dosages (TDV, a vaccine in which TDV-4 had been increased three-fold, and a one-tenth TDV dose), and single or double dosing were evaluated in one and/or both arms. Primary endpoints were solicited and unsolicited adverse events (AEs) and seroconversion rates to DENV-1-4 at Day 120. The severity of all AEs was generally mild. The most common unsolicited AEs were headache (52%), fatigue (43%) and myalgia (29%). The incidence of injection site pain ranged from 29 to 64% and 5 to 52% among study groups after the first and second doses, respectively. At Day 120, the ranges of seroconversion rates among the groups were DEN-1: 84-100%; DEN-2: 96-100%; DEN-3: 83-100%; and DEN-4: 33-77%. More than 80% of participants in each group seroconverted to at least three dengue serotypes. Substantial GMT increases from baseline were observed for DEN-1-3 at all time points from Day 30 onward; DEN-4 GMT increases were lower. Increasing TDV-4 slightly increased DEN-4 GMT, did not impact DEN-2 and DEN-3 GMT, but reduced DEN-1 GMT. Neither multiple dosing in both arms, nor one-tenth TDV dosing meaningfully impacted GMT increases relative to TDV. All TDV doses and dosing schedules were well tolerated and immunogenic in healthy flavivirus-naive adults (ClinicalTrials.gov NCT01511250). Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

  14. A novel rapid direct haemagglutination-inhibition assay for measurements of humoral immune response against non-haemagglutinating Fowlpox virus strains in vaccinated chickens.

    PubMed

    Wambura, Philemon N; Mzula, Alexanda

    2017-10-01

    Fowlpox (FP) is a serious disease in chickens caused by Fowlpox virus (FPV). One method currently used to control FPV is vaccination followed by confirmation that antibody titres are protective using the indirect haemagglutination assay (IHA). The direct haemagglutination inhibition (HI) assay is not done because most FPV strains do not agglutinate chicken red blood cells (RBCs). A novel FPV strain TPV-1 which agglutinates chicken RBCs was discovered recently and enabled a direct HI assay to be conducted using homologous sera. This study is therefore aimed at assessing the direct HI assay using a recently discovered novel haemagglutinating FPV strain TPV-1 in chickens vaccinated with a commercial vaccine containing a non-haemagglutinating FPV.Chicks vaccinated with FPV at 1 day-old had antibody geometric mean titres (GMT) of log 2 3.7 at 7 days after vaccination and log 2 8.0 at 28 days after vaccination when tested in the direct HI. Chickens vaccinated at 6 weeks-old had antibody geometric mean titres (GMT) of log 2 5.0 at 7 days after vaccination and log 2 8.4 at 28 days after vaccination when tested in the direct HI. The GMT recorded 28 days after vaccination was slightly higher in chickens vaccinated at 6-week-old than in chicks vaccinated at one-day-old. However, this difference was not significant (P > 0.05). All vaccinated chickens showed "takes". No antibody response to FPV and "takes" were detected in unvaccinated chickens (GMT < 1). There was a slightly higher GMT in chickens of all ages throughout the observation period when the standard assay, the passive (indirect) haemagglutination was used (Overall GMT reached log 2 9.3 ±.0.3 on day 28). However, the difference between the two assays was not significant (P > 0.05). These findings indicate that a simple and rapid direct HI assay using the FPV TPV-1 strain as antigen may be used to measure antibody levels in chickens vaccinated with non-haemagglutinating strains of FPV, and that the titres are comparable to those obtained by indirect IHA.

  15. Correlation between the Mayan calendar and ours: Astronomy helps to answer why the most popular correlation (GMT) is wrong

    NASA Astrophysics Data System (ADS)

    Klokočník, J.; Kostelecký, J.; Böhm, V.; Böhm, B.; Vondrák, J.; Vítek, F.

    2008-05-01

    The Maya used their own very precise calendar. When transforming data from the Mayan calendar to ours, or vice versa, a surprisingly large uncertainty is found. The relationship between the two calendars has been investigated by many researchers during the last century and about 50 different values of the transformation coefficient, known as the correlation, have been deduced. They can differ by centuries, potentially yielding an incredibly large error in the relation of Mayan history to the history of other civilizations. The most frequently used correlation is the GMT one (of Goodman-Martínez-Thompson), based largely on historical evidence from colonial times. Astronomy (celestial mechanics) may resolve the problem of the correlation, provided that historians have correctly decoded the records of various astronomical phenomena discovered, namely, in one extremely important and rare Mayan book, the Dresden Codex (DC). This describes (among other matters) observations of various astronomical phenomena (eclipses, conjunctions, maximum elongations, heliacal aspects, etc), made by the Maya. Modern celestial mechanics enables us to compute exactly when the phenomena occurred in the sky for the given place on the Earth, even though far back in time. Here we check (by a completely independent method), confirming the value of the correlation obtained by Böhm & Böhm (1996, 1999). In view of these tests, we advocate rejecting the GMT correlation and replacing it by the Böhm's correlation. We also comment on the criticism of GMT by some investigators. The replacement of GMT by another correlation seems, however, unacceptable to many Mayanists, as they would need to rewrite the whole history of Mesoamerica. The history of the Maya would be - for example with Böhm's correlation - closer to our time by 104 years.

  16. A preliminary design for the GMT-Consortium Large Earth Finder (G-CLEF)

    NASA Astrophysics Data System (ADS)

    Szentgyorgyi, Andrew; Barnes, Stuart; Bean, Jacob; Bigelow, Bruce; Bouchez, Antonin; Chun, Moo-Young; Crane, Jeffrey D.; Epps, Harland; Evans, Ian; Evans, Janet; Frebel, Anna; Furesz, Gabor; Glenday, Alex; Guzman, Dani; Hare, Tyson; Jang, Bi-Ho; Jang, Jeong-Gyun; Jeong, Ueejong; Jordan, Andres; Kim, Kang-Min; Kim, Jihun; Li, Chih-Hao; Lopez-Morales, Mercedes; McCracken, Kenneth; McLeod, Brian; Mueller, Mark; Nah, Jakyung; Norton, Timothy; Oh, Heeyoung; Oh, Jae Sok; Ordway, Mark; Park, Byeong-Gon; Park, Chan; Park, Sung-Joon; Phillips, David; Plummer, David; Podgorski, William; Rodler, Florian; Seifahrt, Andreas; Tak, Kyung-Mo; Uomoto, Alan; Van Dam, Marcos A.; Walsworth, Ronald; Yu, Young Sam; Yuk, In-Soo

    2014-08-01

    The GMT-Consortium Large Earth Finder (G-CLEF) is an optical-band echelle spectrograph that has been selected as the first light instrument for the Giant Magellan Telescope (GMT). G-CLEF is a general-purpose, high dispersion spectrograph that is fiber fed and capable of extremely precise radial velocity measurements. The G-CLEF Concept Design (CoD) was selected in Spring 2013. Since then, G-CLEF has undergone science requirements and instrument requirements reviews and will be the subject of a preliminary design review (PDR) in March 2015. Since CoD review (CoDR), the overall G-CLEF design has evolved significantly as we have optimized the constituent designs of the major subsystems, i.e. the fiber system, the telescope interface, the calibration system and the spectrograph itself. These modifications have been made to enhance G-CLEF's capability to address frontier science problems, as well as to respond to the evolution of the GMT itself and developments in the technical landscape. G-CLEF has been designed by applying rigorous systems engineering methodology to flow Level 1 Scientific Objectives to Level 2 Observational Requirements and thence to Level 3 and Level 4. The rigorous systems approach applied to G-CLEF establishes a well defined science requirements framework for the engineering design. By adopting this formalism, we may flexibly update and analyze the capability of G-CLEF to respond to new scientific discoveries as we move toward first light. G-CLEF will exploit numerous technological advances and features of the GMT itself to deliver an efficient, high performance instrument, e.g. exploiting the adaptive optics secondary system to increase both throughput and radial velocity measurement precision.

  17. Induction of human cardiomyocyte-like cells from fibroblasts by defined factors.

    PubMed

    Wada, Rie; Muraoka, Naoto; Inagawa, Kohei; Yamakawa, Hiroyuki; Miyamoto, Kazutaka; Sadahiro, Taketaro; Umei, Tomohiko; Kaneda, Ruri; Suzuki, Tomoyuki; Kamiya, Kaichiro; Tohyama, Shugo; Yuasa, Shinsuke; Kokaji, Kiyokazu; Aeba, Ryo; Yozu, Ryohei; Yamagishi, Hiroyuki; Kitamura, Toshio; Fukuda, Keiichi; Ieda, Masaki

    2013-07-30

    Heart disease remains a leading cause of death worldwide. Owing to the limited regenerative capacity of heart tissue, cardiac regenerative therapy has emerged as an attractive approach. Direct reprogramming of human cardiac fibroblasts (HCFs) into cardiomyocytes may hold great potential for this purpose. We reported previously that induced cardiomyocyte-like cells (iCMs) can be directly generated from mouse cardiac fibroblasts in vitro and vivo by transduction of three transcription factors: Gata4, Mef2c, and Tbx5, collectively termed GMT. In the present study, we sought to determine whether human fibroblasts also could be converted to iCMs by defined factors. Our initial finding that GMT was not sufficient for cardiac induction in HCFs prompted us to screen for additional factors to promote cardiac reprogramming by analyzing multiple cardiac-specific gene induction with quantitative RT-PCR. The addition of Mesp1 and Myocd to GMT up-regulated a broader spectrum of cardiac genes in HCFs more efficiently compared with GMT alone. The HCFs and human dermal fibroblasts transduced with GMT, Mesp1, and Myocd (GMTMM) changed the cell morphology from a spindle shape to a rod-like or polygonal shape, expressed multiple cardiac-specific proteins, increased a broad range of cardiac genes and concomitantly suppressed fibroblast genes, and exhibited spontaneous Ca(2+) oscillations. Moreover, the cells matured to exhibit action potentials and contract synchronously in coculture with murine cardiomyocytes. A 5-ethynyl-2'-deoxyuridine assay revealed that the iCMs thus generated do not pass through a mitotic cell state. These findings demonstrate that human fibroblasts can be directly converted to iCMs by defined factors, which may facilitate future applications in regenerative medicine.

  18. Immunogenicity and safety of two doses of a non-adjuvanted influenza A H1N1/2009 vaccine in young autoimmune rheumatic diseases patients.

    PubMed

    Aikawa, N E; Trudes, G; Campos, L M A; Pereira, R M R; Moraes, J C B; Ribeiro, A C; Miraglia, J; Timenetsky, M do Carmo S; Bonfa, E; Silva, Ca

    2013-11-01

    The aim of this study was to evaluate the immunogenicity and safety of the influenza A H1N1/2009 vaccine in children under 9 years old with autoimmune rheumatic diseases (ARD). Thirty-eight ARD patients and 11 healthy children received two doses of non-adjuvanted influenza A/California/7/2009 (H1N1) virus-like vaccine. Subjects were evaluated before and 21 days after vaccination. Seroprotection (SP) and seroconversion (SC) rates, geometric mean titers (GMT) and factor increases (FI) in GMT were calculated. Mean ages were comparable between patients and controls. Pre-vaccination SP and GMT were similar in patients and controls (p > 0.05). Three weeks after immunization, SP (81.6% vs. 81.8%, p = 1.0), SC (81.6% vs. 90.9%, p = 0.66), GMT (151.5 vs. 282.1, p = 0.26) and the FI in GMT (16.7 vs. 36.3, p = 0.23) were similar in patients and controls, with both groups achieving an adequate response, according to the European Medicines Agency and Food and Drug Administration standards. Analysis of the possible factors influencing SC showed no difference in demographic data, leukocyte/lymphocyte counts or immunosuppressant use between seroconverted and non-seroconverted patients (p > 0.05). The vaccine demonstrated a satisfactory safety profile in this population. Two doses of influenza A H1N1/2009 vaccination induced an effective antibody response and caused adverse events in rare instances, suggesting this vaccine is appropriate and can be recommended for this age group.

  19. The optical design of the G-CLEF Spectrograph: the first light instrument for the GMT

    NASA Astrophysics Data System (ADS)

    Ben-Ami, Sagi; Epps, Harland; Evans, Ian; Mueller, Mark; Podgorski, William; Szentgyorgyi, Andrew

    2016-08-01

    The GMT-Consortium Large Earth Finder (G-CLEF), the first major light instrument for the GMT, is a fiber-fed, high-resolution echelle spectrograph. In the following paper, we present the optical design of G-CLEF. We emphasize the unique solutions derived for the spectrograph fiber-feed: the Mangin mirror that corrects the cylindrical field curvature, the implementation of VPH grisms as cross dispersers, and our novel solution for a multi-colored exposure meter. We describe the spectrograph blue and red cameras comprised of 7 and 8 elements respectively, with one aspheric surface in each camera, and present the expected echellogram imaged on the instrument focal planes. Finally, we present ghost analysis and mitigation strategy that takes into account both single reflection and double reflection back scattering from various elements in the optical train.

  20. GMTIFS: The Giant Magellan Telescope integral fields spectrograph and imager

    NASA Astrophysics Data System (ADS)

    Sharp, Rob; Bloxham, G.; Boz, R.; Bundy, D.; Davies, J.; Espeland, B.; Fordham, B.; Hart, J.; Herrald, N.; Nielsen, J.; Vaccarella, A.; Vest, C.; Young, P.; McGregor, P.

    2016-08-01

    GMTIFS is the first-generation adaptive optics integral-field spectrograph for the GMT, having been selected through a competitive review process in 2011. The GMTIFS concept is for a workhorse single-object integral-field spectrograph, operating at intermediate resolution (R 5,000 and 10,000) with a parallel imaging channel. The IFS offers variable spaxel scales to Nyquist sample the diffraction limited GMT PSF from λ 1-2.5 μm as well as a 50 mas scale to provide high sensitivity for low surface brightness objects. The GMTIFS will operate with all AO modes of the GMT (Natural guide star - NGSAO, Laser Tomography - LTAO, and, Ground Layer - GLAO) with an emphasis on achieving high sky coverage for LTAO observations. We summarize the principle science drivers for GMTIFS and the major design concepts that allow these goals to be achieved.

  1. AVE/VAS 3: 25-mb sounding data

    NASA Technical Reports Server (NTRS)

    Sienkiewicz, M. E.

    1982-01-01

    The rawinsonde sounding program for the AVE/VAS 3 experiment is described. Tabulated data are presented at 25-mb intervals for the 24 National Weather Service stations and 14 special stations participating in the experiment. Soundings were taken at 3-hr intervals, beginning at 1200 GMT on March 27, 1982, and ending at 0600 GMT on March 28, 1982 (7 sounding times). An additional sounding was taken at the National Weather Service stations at 1200 GMT on March 28, 1982, at the normal synoptic observation time. The method of processing soundings is briefly discussed, estimates of the RMS errors in the data are presented, and an example of contact data is given. Termination pressures of soundings taken in the mesos-beta-scale network are tabulated, as are observations of ground temperature at a depth of 2 cm.

  2. JPRS Report, Proliferation Issues

    DTIC Science & Technology

    1992-08-05

    dispatch a research team to Russia in SK3007130792 Pyongyang Korean Central September to discuss details of the joint effort with Broadcasting Network in...to SK3107041192 Pyongyang Korean Central criticize our peaceful nuclear project so as to pressure the Broadcasting Network in Korean 0025 GMT 31 Jul... Network in Korean 0025 GMT 23 Jul 92 had promised before the nation that they would peace- fully reunify the country without fighting each other, the

  3. S-phase Synchronization Facilitates the Early Progression of Induced-Cardiomyocyte Reprogramming through Enhanced Cell-Cycle Exit.

    PubMed

    Bektik, Emre; Dennis, Adrienne; Pawlowski, Gary; Zhou, Chen; Maleski, Danielle; Takahashi, Satoru; Laurita, Kenneth R; Deschênes, Isabelle; Fu, Ji-Dong

    2018-05-04

    Direct reprogramming of fibroblasts into induced cardiomyocytes (iCMs) holds a great promise for regenerative medicine and has been studied in several major directions. However, cell-cycle regulation, a fundamental biological process, has not been investigated during iCM-reprogramming. Here, our time-lapse imaging on iCMs, reprogrammed by Gata4, Mef2c, and Tbx5 (GMT) monocistronic retroviruses, revealed that iCM-reprogramming was majorly initiated at late-G1- or S-phase and nearly half of GMT-reprogrammed iCMs divided soon after reprogramming. iCMs exited cell cycle along the process of reprogramming with decreased percentage of 5-ethynyl-20-deoxyuridine (EdU)⁺/α-myosin heavy chain (αMHC)-GFP⁺ cells. S-phase synchronization post-GMT-infection could enhance cell-cycle exit of reprogrammed iCMs and yield more GFP high iCMs, which achieved an advanced reprogramming with more expression of cardiac genes than GFP low cells. However, S-phase synchronization did not enhance the reprogramming with a polycistronic-viral vector, in which cell-cycle exit had been accelerated. In conclusion, post-infection synchronization of S-phase facilitated the early progression of GMT-reprogramming through a mechanism of enhanced cell-cycle exit.

  4. Design and manufacture of 8.4 m primary mirror segments and supports for the GMT

    NASA Astrophysics Data System (ADS)

    Martin, H. M.; Angel, J. R. P.; Burge, J. H.; Cuerden, B.; Davison, W. B.; Johns, M.; Kingsley, J. S.; Kot, L. B.; Lutz, R. D.; Miller, S. M.; Shectman, S. A.; Strittmatter, P. A.; Zhao, C.

    2006-06-01

    The design, manufacture and support of the primary mirror segments for the GMT build on the successful primary mirror systems of the MMT, Magellan and Large Binocular telescopes. The mirror segment and its support system are based on a proven design, and the experience gained in the existing telescopes has led to significant refinements that will provide even better performance in the GMT. The first 8.4 m segment has been cast at the Steward Observatory Mirror Lab, and optical processing is underway. Measurement of the off-axis surface is the greatest challenge in the manufacture of the segments. A set of tests that meets the requirements has been defined and the concepts have been developed in some detail. The most critical parts of the tests have been demonstrated in the measurement of a 1.7 m off-axis prototype. The principal optical test is a full-aperture, high-resolution null test in which a hybrid reflective-diffractive null corrector compensates for the 14 mm aspheric departure of the off-axis segment. The mirror support uses the same synthetic floatation principle as the MMT, Magellan, and LBT mirrors. Refinements for GMT include 3-axis actuators to accommodate the varying orientations of segments in the telescope.

  5. Hypercat - Hypercube of Clumpy AGN Tori

    NASA Astrophysics Data System (ADS)

    Nikutta, Robert; Lopez-Rodriguez, Enrique; Ichikawa, Kohei; Levenson, Nancy; Packham, Christopher C.

    2017-06-01

    Dusty tori surrounding the central engines of Active Galactic Nuclei (AGN) are required by the Unification Paradigm, and are supported by many observations, e.g. variable nuclear absorber (sometimes Compton-thick) in X-rays, reverberation mapping in optical/UV, hot dust emission and SED shapes in NIR/MIR, molecular and cool-dust tori observed with ALMA in sub-mm.While models of AGN torus SEDs have been developed and utilized for a long time, the study of the resolved emission morphology (brightness maps) has so far been under-appreciated, presumably because resolved observations of the central parsec in AGN are only possible very recently. Currently, only NIR+MIR interferometry is capable of resolving the nuclear dust emission (but not of producing images, until MATISSE comes online). Furthermore, MIR interferometry has delivered also puzzling results, e.g. that in some resolved sources the light emanates preferentially from polar directions above the "torus" system, and not from the equatorial plane, where most of the dust is located.We are preparing the release of a panchromatic, fully interpolable hypercube of brightness maps and projected dust images for a large number of CLUMPY torus models (Nenkova+2008), that will help facilitate studies of resolved AGN emission and dust morphologies. Together with the cube we will release a comprehensive set of open-source tools (Python) that will enable researches to work efficiently with this large hypercube:* easy sub-cube selection + memory-mapping (mitigating the too-big-for-RAM problem)* multi-dim image interpolation (get an image at any wavelength & model parameter combination)* simulation of observations with telescopes (compute/provide + apply a PSF) and interferometers (get visibilities)* analyze images with respect to the power contained at all scales and orientations (via 2D steerable wavelets), addressing the seemingly puzzling results mentioned aboveA series of papers is in preparation, aiming at solving the puzzles, and at making predictions about the resolvability of all nearby AGN tori with any combination of current and future instruments (e.g. VLTI+MATISSE, TMT+MICHI, GMT, ELT, JWST, ALMA).

  6. Data for NASA's AVE 4 experiment: 25-mb sounding data and synoptic charts

    NASA Technical Reports Server (NTRS)

    Fucik, N. F.; Turner, R. E.

    1975-01-01

    The AVE 4 Experiment is described and tabulated rawinsonde data at 25-mb intervals from the surface to 25 mb for the 42 stations participating in the experiment are presented. Soundings were taken between 0000 GMT, April 24 and 1200 GMT, April 25, 1975. The methods of data processing and accuracy are discussed. Synoptic charts prepared from the data are presented, as well as an example of contact data.

  7. Impact of the initial specification of moisture and vertical motion on precipitation forecasts with a mesoscale model Implications for a satellite mesoscale data base

    NASA Technical Reports Server (NTRS)

    Mlynczak, Pamela E.; Houghton, David D.; Diak, George R.

    1986-01-01

    Using a numerical mesoscale model, four simulations were performed to determine the effects of suppressing the initial mesoscale information in the moisture and wind fields on the precipitation forecasts. The simulations included a control forecast 12-h simulation that began at 1200 GMT March 1982 and three experiment simulations with modifications to the moisture and vertical motion fields incorporated at 1800 GMT. The forecasts from 1800 GMT were compared to the second half of the control forecast. It was found that, compared to the control forecast, suppression of the moisture and/or wind initial field(s) produces a drier forecast. However, the characteristics of the precipitation forecasts of the experiments were not different enough to conclude that either mesoscale moisture or mesoscale vertical velocity at the initial time are more important for producing a forecast closer to that of the control.

  8. The Nimbus 5 data catalog. Volume 1: Data orbits 104 through 693, 19 December 1972 - 31 January 1973

    NASA Technical Reports Server (NTRS)

    1973-01-01

    Nimbus 5 was successfully launched from the Western Test Range at Vandenburg AFB, California, into a near circular orbit (1089 km x 1102 km) at 07 hr 56 min 00 sec GMT on 11 December 1972. All experiments and subsystems were successfully turned on. Satellite operations from launch (11 December) through orbit 103 (18 December) consisted of engineering evaluation of all spacecraft systems. As a result of that effort, data reception, accountability, and processing were intermittent during that period. Therefore, this catalog reflects documentation from orbit 104 (19 December 1972) through orbit 693 (31 January 1973). The pitch bias history, surface composition mapping radiometer, and infrared temperature profile radiometer are discussed.

  9. An Integrated Multivariable Visualization Tool for Marine Sanctuary Climate Assessments

    NASA Astrophysics Data System (ADS)

    Shein, K. A.; Johnston, S.; Stachniewicz, J.; Duncan, B.; Cecil, D.; Ansari, S.; Urzen, M.

    2012-12-01

    The comprehensive development and use of ecological climate impact assessments by ecosystem managers can be limited by data access and visualization methods that require a priori knowledge about the various large and complex climate data products necessary to those impact assessments. In addition, it can be difficult to geographically and temporally integrate climate and ecological data to fully characterize climate-driven ecological impacts. To address these considerations, we have enhanced and extended the functionality of the NOAA National Climatic Data Center's Weather and Climate Toolkit (WCT). The WCT is a freely available Java-based tool designed to access and display NCDC's georeferenced climate data products (e.g., satellite, radar, and reanalysis gridded data). However, the WCT requires users already know how to obtain the data products, which products are preferred for a given variable, and which products are most relevant to their needs. Developed in cooperation with research and management customers at the Gulf of the Farallones National Marine Sanctuary, the Integrated Marine Protected Area Climate Tools (IMPACT) modification to the WCT simplifies or eliminates these requirements, while simultaneously adding core analytical functionality to the tool. Designed for use by marine ecosystem managers, WCT-IMPACT accesses a suite of data products that have been identified as relevant to marine ecosystem climate impact assessments, such as NOAA's Climate Data Records. WCT-IMPACT regularly crops these products to the geographic boundaries of each included marine protected area (MPA), and those clipped regions are processed to produce MPA-specific analytics. The tool retrieves the most appropriate data files based on the user selection of MPA, environmental variable(s), and time frame. Once the data are loaded, they may be visualized, explored, analyzed, and exported to other formats (e.g., Google KML). Multiple variables may be simultaneously visualized using a 4-panel display and compared via a variety of statistics such as difference, probability, or correlation maps.; NCDC's Weather and Climate Toolkit image of NARR-A non-convective cloud cover (%) over the Pacific Coast on June 17, 2012 at 09:00 GMT.

  10. Modelling the Velocity Field in a Regular Grid in the Area of Poland on the Basis of the Velocities of European Permanent Stations

    NASA Astrophysics Data System (ADS)

    Bogusz, Janusz; Kłos, Anna; Grzempowski, Piotr; Kontny, Bernard

    2014-06-01

    The paper presents the results of testing the various methods of permanent stations' velocity residua interpolation in a regular grid, which constitutes a continuous model of the velocity field in the territory of Poland. Three packages of software were used in the research from the point of view of interpolation: GMT ( The Generic Mapping Tools), Surfer and ArcGIS. The following methods were tested in the softwares: the Nearest Neighbor, Triangulation (TIN), Spline Interpolation, Surface, Inverse Distance to a Power, Minimum Curvature and Kriging. The presented research used the absolute velocities' values expressed in the ITRF2005 reference frame and the intraplate velocities related to the NUVEL model of over 300 permanent reference stations of the EPN and ASG-EUPOS networks covering the area of Europe. Interpolation for the area of Poland was done using data from the whole area of Europe to make the results at the borders of the interpolation area reliable. As a result of this research, an optimum method of such data interpolation was developed. All the mentioned methods were tested for being local or global, for the possibility to compute errors of the interpolated values, for explicitness and fidelity of the interpolation functions or the smoothing mode. In the authors' opinion, the best data interpolation method is Kriging with the linear semivariogram model run in the Surfer programme because it allows for the computation of errors in the interpolated values and it is a global method (it distorts the results in the least way). Alternately, it is acceptable to use the Minimum Curvature method. Empirical analysis of the interpolation results obtained by means of the two methods showed that the results are identical. The tests were conducted using the intraplate velocities of the European sites. Statistics in the form of computing the minimum, maximum and mean values of the interpolated North and East components of the velocity residuum were prepared for all the tested methods, and each of the resulting continuous velocity fields was visualized by means of the GMT programme. The interpolated components of the velocities and their residua are presented in the form of tables and bar diagrams.

  11. Generalised and Fractional Langevin Equations-Implications for Energy Balance Models

    NASA Astrophysics Data System (ADS)

    Watkins, N. W.; Chapman, S. C.; Chechkin, A.; Ford, I.; Klages, R.; Stainforth, D. A.

    2017-12-01

    Energy Balance Models (EBMs) have a long heritage in climate science, including their use in modelling anomalies in global mean temperature. Many types of EBM have now been studied, and this presentation concerns the stochastic EBMs, which allow direct treatment of climate fluctuations and noise. Some recent stochastic EBMs (e.g. [1]) map on to Langevin's original form of his equation, with temperature anomaly replacing velocity, and other corresponding replacements being made. Considerable sophistication has now been reached in the application of multivariate stochastic Langevin modelling in many areas of climate. Our work is complementary in intent and investigates the Mori-Kubo "Generalised Langevin Equation" (GLE) which incorporates non-Markovian noise and response in a univariate framework, as a tool for modelling GMT [2]. We show how, if it is present, long memory simplifies the GLE to a fractional Langevin equation (FLE). Evidence for long range memory in global temperature, and the success of fractional Gaussian noise in its prediction [5] has already motivated investigation of a power law response model [3,4,5]. We go beyond this work to ask whether an EBM of FLE-type exists, and what its solutions would be. [l] Padilla et al, J. Climate (2011); [2] Watkins, GRL (2013); [3] Rypdal, JGR (2012); [4] Rypdal and Rypdal, J. Climate (2014); [5] Lovejoy et al, ESDD (2015).

  12. Description of data on the Nimbus 7 LIMS map archive tape: Ozone and nitric acid

    NASA Technical Reports Server (NTRS)

    Remsberg, E. E.; Kurzeja, R. J.; Haggard, K. V.; Russell, J. M., III; Gordley, L. L.

    1986-01-01

    The Nimbus 7 Limb Infrared Monitor of the Stratosphere (LIMS) data set has been processed into a Fourier coefficient representation with a Kalman filter algorithm applied to profile data at individual latitudes and pressure levels. The algorithm produces synoptic data at noon Greenwich Mean Time (GMT) from the asynoptic orbital profiles. This form of the data set is easy to use and is appropriate for time series analysis and further data manipulation and display. Ozone and nitric acid results are grouped together in this report because the LIMS vertical field of views (FOV's) and analysis characteristics for these species are similar. A comparison of the orbital input data with mixing ratios derived from Kalman filter coefficients indicates errors in mixing ratio of generally less than 5 percent, with 15 percent being a maximum error. The high quality of the mapped data was indicated by coherence of both the phases and the amplitudes of waves with latitude and pressure. Examples of the mapped fields are presented, and details are given concerning the importance of diurnal variations, the removal of polar stratospheric cloud signatures, and the interpretation of bias effects in the data near the tops of profiles.

  13. Safety and immunogenicity of a Vi polysaccharide-tetanus toxoid conjugate vaccine (Typbar-TCV) in healthy infants, children, and adults in typhoid endemic areas: a multicenter, 2-cohort, open-label, double-blind, randomized controlled phase 3 study.

    PubMed

    Mohan, Vadrevu Krishna; Varanasi, Vineeth; Singh, Anit; Pasetti, Marcela F; Levine, Myron M; Venkatesan, Ramasamy; Ella, Krishna M

    2015-08-01

    Enteric fever caused by Salmonella Typhi remains a major public health problem in developing countries. Typbar-TCV is a single-dose typhoid Vi polysaccharide-tetanus toxoid conjugate vaccine for persons ≥6 months of age. Six hundred fifty-four healthy subjects aged 2-45 years enrolled in a double-blind, randomized controlled trial (RCT) received a single dose of Typbar-TCV or comparator "Vi polysaccharide" (Typbar), and 327 healthy subjects aged 6-23 months received a single dose of Typbar-TCV in an open-label trial (OLT); both received single- or multidose presentations from different lots. After 2 years, subsets in each group received a booster dose. The primary objective included analysis of geometric mean titer (GMTs) and 4-fold rise of anti-Vi serum immunoglobulin G (IgG) enzyme-linked immunosorbent assay titers over baseline (seroconversion [SCN]) 42 days after immunization. Typbar-TCV recipients in the RCT attained higher anti-Vi IgG GMTs 42 days after immunization (SCN, 97%; GMT, 1293 [95% confidence interval {CI}, 1153-1449]) than recipients of Typbar (SCN, 93%; GMT, 411 [95% CI, 359-471]) (P < .001). Typbar-TCV was highly immunogenic in the OLT (SCN, 98%; GMT, 1937 [95% CI, 1785-2103]). Two years after vaccination, anti-Vi titers remained higher in Typbar-TCV subjects (GMT, 82 [95% CI, 73-92]); and exhibited higher avidity (geometric mean avidity index [GMAI], 60%) than in Typbar recipients (GMT, 46 [95% CI, 40-53]; GMAI 46%) in the RCT (P < .001). OLT Typbar-TCV recipients achieved GMT of 48 (95% CI, 42-55) and GMAI of 57%. Typbar-TCV induced multiple IgG subclasses and strong booster responses in all ages. No serious vaccine-attributable adverse events were observed. Single-dose Typbar-TCV is well tolerated and induces robust and long-lasting serum anti-Vi IgG across age groups. CTRI/2011/08/001957, CTRI/2014/01/004341. © The Author 2015. Published by Oxford University Press on behalf of the Infectious Diseases Society of America. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  14. Immunogenicity and reactogenicity of alternative schedules of HPV vaccine in Vietnam: a cluster randomized noninferiority trial.

    PubMed

    Neuzil, Kathleen M; Canh, Do Gia; Thiem, Vu Dinh; Janmohamed, Amynah; Huong, Vu Minh; Tang, Yuxiao; Diep, Nguyen Thi Ngoc; Tsu, Vivien; LaMontagne, D Scott

    2011-04-13

    Human papillomavirus (HPV) vaccine programs may decrease the morbidity and mortality due to cervical cancer seen among women in low-resource countries. However, the 3-dose schedule over a 6-month period is a potential barrier to vaccine introduction in such settings. To determine the immunogenicity and reactogenicity of different dosing schedules of quadrivalent HPV vaccine in adolescent girls in Vietnam. Open-label, cluster randomized, noninferiority study (conducted between October 2007 and January 2010) assessing 4 schedules of an HPV vaccine delivered in 21 schools to 903 adolescent girls (aged 11-13 years at enrollment) living in northwestern Vietnam. Intramuscular injection of 3 doses of quadrivalent HPV vaccine delivered on a standard dosing schedule (at 0, 2, and 6 months) and 3 alternative dosing schedules (at 0, 3, and 9 months; at 0, 6, and 12 months; or at 0, 12, and 24 months). Serum anti-HPV geometric mean titers (GMT) measured 1 month after the third dose of the HPV vaccine was administered; GMT was determined by type-specific competitive immunoassay. Noninferiority of each alternative vaccination dosing schedule was achieved if the lower bound of the multiplicity-adjusted confidence interval (CI) of the type-specific GMT ratio for HPV-16 and HPV-18 was greater than 0.5 (primary outcome). Safety outcomes were immediate reactions, local reactions, fever within 7 days after each dose, and serious adverse events up to 30 days following the last dose. In the intention-to-treat analysis, 809 girls who received at least 1 HPV vaccine dose had valid serum measurements 1 month after the third dose. After the third dose, the GMTs for those in the standard schedule group who received doses at 0, 2, and 6 months were 5808.0 (95% CI, 4961.4-6799.0) for HPV-16 and 1729.9 (95% CI, 1504.0-1989.7) for HPV-18; 5368.5 (95% CI, 4632.4-6221.5) and 1502.3 (95% CI, 1302.1-1733.2), respectively, for those whose received doses at 0, 3, and 9 months; 5716.4 (95% CI, 4876.7-6700.6) and 1581.5 (95% CI, 1363.4-1834.6), respectively, for those who received doses at 0, 6, and 12 months; and 3692.5 (95% CI, 3145.3-4334.9) and 1335.7 (95% CI, 1191.6-1497.3), respectively, for those who received doses at 0, 12, and 24 months. Noninferiority criteria were met for the alternative schedule groups that received doses at 0, 3, and 9 months (HPV-16 GMT ratio: 0.92 [95% CI, 0.71-1.20]; HPV-18 GMT ratio: 0.87 [95% CI, 0.68-1.11]) and at 0, 6, and 12 months (HPV-16 GMT ratio: 0.98 [95% CI, 0.75-1.29]; HPV-18 GMT ratio: 0.91 [95% CI, 0.71-1.17]). Prespecified noninferiority criteria were not met for the alternative schedule group that received doses at 0, 12, and 24 months (HPV-16 GMT ratio: 0.64 [95% CI, 0.48-0.84]; HPV-18 GMT ratio: 0.77 [95% CI, 0.62-0.96]). Pain at the injection site was the most common adverse event. Among adolescent girls in Vietnam, administration of the HPV vaccine on standard and alternative schedules was immunogenic and well tolerated. The use of 2 alternative dosing schedules (at 0, 3, and 9 months and at 0, 6, and 12 months) compared with a standard schedule (at 0, 2, and 6 months) did not result in inferior antibody concentrations. clinicaltrials.gov Identifier: NCT00524745.

  15. Data for NASA's AVSSE 2 experiment: 25 mb sounding data and synoptic charts

    NASA Technical Reports Server (NTRS)

    Fucik, N. F.; Turner, R. E.

    1976-01-01

    The AVSSE II experiment is described and tabulated rawinsonde data at 25 mb intervals from the surface to 25 mb for the 23 stations participating in the experiment are presented. Soundings were taken between 1,200 GMT, May 6, and 1,200 GMT, May 7, 1975. The methods of data processing and accuracy are briefly discussed. Synoptic charts prepared from the data are presented, as well as an example of contact data.

  16. Data for NASA's AVE 4 experiment: 25 mb sounding data and synoptic charts

    NASA Technical Reports Server (NTRS)

    Fucik, N. F.; Turner, R. E.

    1976-01-01

    The AVE IV Experiment is described and tabulated rawinsonde data at 25 mb intervals from the surface to 25 mb for the 42 stations participating in the experiment are presented. Soundings were taken between 0000 GMT, April 24, and 1,200 GMT, April 25, 1975. The methods of data processing and accuracy are briefly discussed. Synoptic charts prepared from the data are presented, as well as an example of contact data.

  17. SEGY to ASCII: Conversion and Plotting Program

    USGS Publications Warehouse

    Goldman, Mark R.

    1999-01-01

    This report documents a computer program to convert standard 4 byte, IBM floating point SEGY files to ASCII xyz format. The program then optionally plots the seismic data using the GMT plotting package. The material for this publication is contained in a standard tar file (of99-126.tar) that is uncompressed and 726 K in size. It can be downloaded by any Unix machine. Move the tar file to the directory you wish to use it in, then type 'tar xvf of99-126.tar' The archive files (and diskette) contain a NOTE file, a README file, a version-history file, source code, a makefile for easy compilation, and an ASCII version of the documentation. The archive files (and diskette) also contain example test files, including a typical SEGY file along with the resulting ASCII xyz and postscript files. Requirements for compiling the source code into an executable are a C++ compiler. The program has been successfully compiled using Gnu's g++ version 2.8.1, and use of other compilers may require modifications to the existing source code. The g++ compiler is a free, high quality C++ compiler and may be downloaded from the ftp site: ftp://ftp.gnu.org/gnu Requirements for plotting the seismic data is the existence of the GMT plotting package. The GMT plotting package may be downloaded from the web site: http://www.soest.hawaii.edu/gmt/

  18. Postdose 3 G1 serum neutralizing antibody as correlate of protection for pentavalent rotavirus vaccine.

    PubMed

    Liu, G Frank; Hille, Darcy; Kaplan, Susan S; Goveia, Michelle G

    2017-10-03

    Although clinical trials of the pentavalent rotavirus vaccine (RotaTeq®, RV5) have demonstrated efficacy against RV gastroenteritis (RGE) in low and high-income settings, a clear correlate of protection or a measure of immune response that could predict efficacy has yet to be identified. This is the first time that immunogenicity data with both serum neutralized antibody (SNA) titers and anti-RV IgA titers from several clinical efficacy trials were pooled to provide a unique context for evaluating the correlation between immunogenicity and RGE risk or efficacy of RV5. The correlation between immunogenicity and RGE risk is evaluated with data at the individual subject level. The analyses show that higher Postdose 3 (PD3) G1 SNA titers are associated with lower odds of contracting any RGE. The correlation between immunogenicity and efficacy is assessed using aggregated population level data, which shows higher efficacy associated with higher PD3 G1 SNA geometric mean titer (GMT) ratio (between RV5 and placebo) and PD3 serum anti-RV IgA GMT ratio. Among high-income countries, efficacy plateaus over the range of PD3 G1 SNA GMT ratios and PD3 serum anti-RV IgA GMT ratios. From both individual- and population-level analyses, PD3 G1 SNA titers correlated most closely with the RGE risk or efficacy for RV5.

  19. Continued increase of extreme El Niño frequency long after 1.5 °C warming stabilization

    NASA Astrophysics Data System (ADS)

    Wang, Guojian; Cai, Wenju; Gan, Bolan; Wu, Lixin; Santoso, Agus; Lin, Xiaopei; Chen, Zhaohui; McPhaden, Michael J.

    2017-08-01

    The Paris Agreement aims to constrain global mean temperature (GMT) increases to 2 °C above pre-industrial levels, with an aspirational target of 1.5 °C. However, the pathway to these targets and the impacts of a 1.5 °C and 2 °C warming on extreme El Niño and La Niña events--which severely influence weather patterns, agriculture, ecosystems, public health and economies--is little known. Here, by analysing climate models participating in the Climate Model Intercomparison Project's Phase 5 (CMIP5; ref. ) under a most likely emission scenario, we demonstrate that extreme El Niño frequency increases linearly with the GMT towards a doubling at 1.5 °C warming. This increasing frequency of extreme El Niño events continues for up to a century after GMT has stabilized, underpinned by an oceanic thermocline deepening that sustains faster warming in the eastern equatorial Pacific than the off-equatorial region. Ultimately, this implies a higher risk of extreme El Niño to future generations after GMT rise has halted. On the other hand, whereas previous research suggests extreme La Niña events may double in frequency under the 4.5 °C warming scenario, the results presented here indicate little to no change under 1.5 °C or 2 °C warming.

  20. Long-term patterns of immune investment by wild deer mice infected with Sin Nombre virus.

    PubMed

    Lehmer, Erin M; Jones, Jeremy D; Bego, Mariana G; Varner, Johanna M; Jeor, Stephen St; Clay, Christine A; Dearing, M Denise

    2010-01-01

    Immunocompetence of animals fluctuates seasonally, However, there is little consensus on the cause of these fluctuations. Some studies have suggested that these patterns are influenced by changes in reproductive condition, whereas others have suggested that differences result from seasonal variations in energy expenditures. The objective of our study was to examine these contrasting views of immunity by evaluating seasonal patterns of immune response and reproduction in wild populations of deer mice Peromyscus maniculatus exposed to Sin Nombre virus (SNV). Over three consecutive fall (September, October, November) and three consecutive spring (March, April, May) sampling periods, we used titration enzyme-linked immunosorbent assay (ELISA) to quantify virus-specific antibody production in 48 deer mice infected with SNV. Levels of reproductive hormones were quantified using ELISA. SNV antibody titers reached their lowest level during November (geometric mean titer [GMT] = 420) and their highest levels during September (GMT = 5,545) and May (GMT = 3,582), suggesting that the immune response of deer mice to SNV has seasonal patterns. The seeming decrease in antibody titer over winter coupled with the consistency in body masses suggests that during winter, immunocompetence may be compromised to offset the energetic costs of maintenance functions, including those associated with maintaining body mass. Deer mice showed distinct sex-based differences in SNV antibody production, with males producing higher antibody titers (GMT = 3,333) than females (GMT = 1,477). Levels of reproductive hormones do not appear to influence antibody production in either males or females, as there was no correlation between estradiol concentrations and SNV antibody titer in female deer mice (r² = 0.26), nor was there a significant relationship between levels of testosterone and SNV antibody titers in males (r² = 0.28). Collectively, this study demonstrates that immunocompetence of wild deer mice is seasonally variable; however, reproduction is not the primary stressor responsible for this variation. Rather, the data suggest that deer mice may compromise immunocompetence during winter to offset other maintenance costs during this period.

  1. Time to Change Dosing of Inactivated Quadrivalent Influenza Vaccine in Young Children: Evidence From a Phase III, Randomized, Controlled Trial.

    PubMed

    Jain, Varsha K; Domachowske, Joseph B; Wang, Long; Ofori-Anyinam, Opokua; Rodríguez-Weber, Miguel A; Leonardi, Michael L; Klein, Nicola P; Schlichter, Gary; Jeanfreau, Robert; Haney, Byron L; Chu, Laurence; Harris, Jo-Ann S; Sarpong, Kwabena O; Micucio, Amanda C; Soni, Jyoti; Chandrasekaran, Vijayalakshmi; Li, Ping; Innis, Bruce L

    2017-03-01

    Children under 3 years of age may benefit from a double-dose of inactivated quadrivalent influenza vaccine (IIV4) instead of the standard-dose. We compared the only United States-licensed standard-dose IIV4 (0.25 mL, 7.5 µg hemagglutinin per influenza strain) versus double-dose IIV4 manufactured by a different process (0.5 mL, 15 µg per strain) in a phase III, randomized, observer-blind trial in children 6-35 months of age (NCT02242643). The primary objective was to demonstrate immunogenic noninferiority of the double-dose for all vaccine strains 28 days after last vaccination. Immunogenic superiority of the double-dose was evaluated post hoc. Immunogenicity was assessed in the per-protocol cohort (N = 2041), and safety was assessed in the intent-to-treat cohort (N = 2424). Immunogenic noninferiority of double-dose versus standard-dose IIV4 was demonstrated in terms of geometric mean titer (GMT) ratio and seroconversion rate difference. Superior immunogenicity against both vaccine B strains was observed with double-dose IIV4 in children 6-17 months of age (GMT ratio = 1.89, 95% confidence interval [CI] = 1.64-2.17, B/Yamagata; GMT ratio = 2.13, 95% CI = 1.82-2.50, B/Victoria) and in unprimed children of any age (GMT ratio = 1.85, 95% CI = 1.59-2.13, B/Yamagata; GMT ratio = 2.04, 95% CI = 1.79-2.33, B/Victoria). Safety and reactogenicity, including fever, were similar despite the higher antigen content and volume of the double-dose IIV4. There were no attributable serious adverse events. Double-dose IIV4 may improve protection against influenza B in some young children and simplifies annual influenza vaccination by allowing the same vaccine dose to be used for all eligible children and adults. © The Author 2017. Published by Oxford University Press on behalf of The Journal of the Pediatric Infectious Diseases Society

  2. Time to Change Dosing of Inactivated Quadrivalent Influenza Vaccine in Young Children: Evidence From a Phase III, Randomized, Controlled Trial

    PubMed Central

    Jain, Varsha K.; Domachowske, Joseph B.; Wang, Long; Ofori-Anyinam, Opokua; Rodríguez-Weber, Miguel A.; Leonardi, Michael L.; Klein, Nicola P.; Schlichter, Gary; Jeanfreau, Robert; Haney, Byron L.; Chu, Laurence; Harris, Jo-Ann S.; Sarpong, Kwabena O.; Micucio, Amanda C.; Soni, Jyoti; Chandrasekaran, Vijayalakshmi; Li, Ping

    2017-01-01

    Abstract Background. Children under 3 years of age may benefit from a double-dose of inactivated quadrivalent influenza vaccine (IIV4) instead of the standard-dose. Methods. We compared the only United States-licensed standard-dose IIV4 (0.25 mL, 7.5 µg hemagglutinin per influenza strain) versus double-dose IIV4 manufactured by a different process (0.5 mL, 15 µg per strain) in a phase III, randomized, observer-blind trial in children 6–35 months of age (NCT02242643). The primary objective was to demonstrate immunogenic noninferiority of the double-dose for all vaccine strains 28 days after last vaccination. Immunogenic superiority of the double-dose was evaluated post hoc. Immunogenicity was assessed in the per-protocol cohort (N = 2041), and safety was assessed in the intent-to-treat cohort (N = 2424). Results. Immunogenic noninferiority of double-dose versus standard-dose IIV4 was demonstrated in terms of geometric mean titer (GMT) ratio and seroconversion rate difference. Superior immunogenicity against both vaccine B strains was observed with double-dose IIV4 in children 6–17 months of age (GMT ratio = 1.89, 95% confidence interval [CI] = 1.64–2.17, B/Yamagata; GMT ratio = 2.13, 95% CI = 1.82–2.50, B/Victoria) and in unprimed children of any age (GMT ratio = 1.85, 95% CI = 1.59–2.13, B/Yamagata; GMT ratio = 2.04, 95% CI = 1.79–2.33, B/Victoria). Safety and reactogenicity, including fever, were similar despite the higher antigen content and volume of the double-dose IIV4. There were no attributable serious adverse events. Conclusions. Double-dose IIV4 may improve protection against influenza B in some young children and simplifies annual influenza vaccination by allowing the same vaccine dose to be used for all eligible children and adults. PMID:28062552

  3. Telephone-based goal management training for adults with mild traumatic brain injury: study protocol for a randomized controlled trial.

    PubMed

    Archer, Kristin R; Coronado, Rogelio A; Haislip, Lori R; Abraham, Christine M; Vanston, Susan W; Lazaro, Anthony E; Jackson, James C; Ely, E Wesley; Guillamondegui, Oscar D; Obremskey, William T

    2015-06-02

    Approximately 1 million individuals experience a mild traumatic brain injury (TBI) and cost the United States nearly $17 billion each year. Many trauma survivors with mild TBI have debilitating and long-term physical, emotional, and cognitive impairments that are unrecognized at trauma centers. Early intervention studies are needed to address these impairments, especially cognitive deficits in executive functioning. Goal management training (GMT) is a structured cognitive rehabilitation program that has been found to improve executive functioning in patients with moderate to severe TBI. The current study adapted the GMT program for telephone delivery in order to improve the accessibility of rehabilitation services in a patient population with multiple barriers to care and significant yet unrecognized cognitive impairment. The primary objective of this study is to examine the efficacy of telephone-based GMT for improving executive functioning, functional status, and psychological health in trauma survivors with mild TBI. This study is a three-group randomized controlled trial being conducted at a Level I trauma center. Ninety trauma survivors with mild TBI and cognitive deficits in executive functioning will be randomized to receive telephone-based GMT, telephone-based education, or usual care. GMT and education programs will be delivered by a physical therapist. The first in-person session is 1 h and the remaining six telephone sessions are 30 min. A battery of well-established cognitive tests will be conducted and validated questionnaires will be collected that measure executive functioning, functional status, and depressive and posttraumatic stress disorder symptoms at 6 weeks, 4 months, and 7 months following hospital discharge. This study supports a telephone-delivery approach to rehabilitation services in order to broaden the availability of evidence-based cognitive strategies. This trial was registered with Clinicaltrials.gov on 10 October 2012, registration number: NCT01714531.

  4. Forward Programming of Cardiac Stem Cells by Homogeneous Transduction with MYOCD plus TBX5

    PubMed Central

    Belian, Elisa; Noseda, Michela; Abreu Paiva, Marta S.; Leja, Thomas; Sampson, Robert; Schneider, Michael D.

    2015-01-01

    Adult cardiac stem cells (CSCs) express many endogenous cardiogenic transcription factors including members of the Gata, Hand, Mef2, and T-box family. Unlike its DNA-binding targets, Myocardin (Myocd)—a co-activator not only for serum response factor, but also for Gata4 and Tbx5—is not expressed in CSCs. We hypothesised that its absence was a limiting factor for reprogramming. Here, we sought to investigate the susceptibility of adult mouse Sca1+ side population CSCs to reprogramming by supplementing the triad of GATA4, MEF2C, and TBX5 (GMT), and more specifically by testing the effect of the missing co-activator, Myocd. Exogenous factors were expressed via doxycycline-inducible lentiviral vectors in various combinations. High throughput quantitative RT-PCR was used to test expression of 29 cardiac lineage markers two weeks post-induction. GMT induced more than half the analysed cardiac transcripts. However, no protein was detected for the induced sarcomeric genes Actc1, Myh6, and Myl2. Adding MYOCD to GMT affected only slightly the breadth and level of gene induction, but, importantly, triggered expression of all three proteins examined (α-cardiac actin, atrial natriuretic peptide, sarcomeric myosin heavy chains). MYOCD + TBX was the most effective pairwise combination in this system. In clonal derivatives homogenously expressing MYOCD + TBX at high levels, 93% of cardiac transcripts were up-regulated and all five proteins tested were visualized. In summary: (1) GMT induced cardiac genes in CSCs, but not cardiac proteins under the conditions used. (2) Complementing GMT with MYOCD induced cardiac protein expression, indicating a more complete cardiac differentiation program. (3) Homogeneous transduction with MYOCD + TBX5 facilitated the identification of differentiating cells and the validation of this combinatorial reprogramming strategy. Together, these results highlight the pivotal importance of MYOCD in driving CSCs toward a cardiac muscle fate. PMID:26047103

  5. Forward Programming of Cardiac Stem Cells by Homogeneous Transduction with MYOCD plus TBX5.

    PubMed

    Belian, Elisa; Noseda, Michela; Abreu Paiva, Marta S; Leja, Thomas; Sampson, Robert; Schneider, Michael D

    2015-01-01

    Adult cardiac stem cells (CSCs) express many endogenous cardiogenic transcription factors including members of the Gata, Hand, Mef2, and T-box family. Unlike its DNA-binding targets, Myocardin (Myocd)-a co-activator not only for serum response factor, but also for Gata4 and Tbx5-is not expressed in CSCs. We hypothesised that its absence was a limiting factor for reprogramming. Here, we sought to investigate the susceptibility of adult mouse Sca1+ side population CSCs to reprogramming by supplementing the triad of GATA4, MEF2C, and TBX5 (GMT), and more specifically by testing the effect of the missing co-activator, Myocd. Exogenous factors were expressed via doxycycline-inducible lentiviral vectors in various combinations. High throughput quantitative RT-PCR was used to test expression of 29 cardiac lineage markers two weeks post-induction. GMT induced more than half the analysed cardiac transcripts. However, no protein was detected for the induced sarcomeric genes Actc1, Myh6, and Myl2. Adding MYOCD to GMT affected only slightly the breadth and level of gene induction, but, importantly, triggered expression of all three proteins examined (α-cardiac actin, atrial natriuretic peptide, sarcomeric myosin heavy chains). MYOCD + TBX was the most effective pairwise combination in this system. In clonal derivatives homogenously expressing MYOCD + TBX at high levels, 93% of cardiac transcripts were up-regulated and all five proteins tested were visualized. (1) GMT induced cardiac genes in CSCs, but not cardiac proteins under the conditions used. (2) Complementing GMT with MYOCD induced cardiac protein expression, indicating a more complete cardiac differentiation program. (3) Homogeneous transduction with MYOCD + TBX5 facilitated the identification of differentiating cells and the validation of this combinatorial reprogramming strategy. Together, these results highlight the pivotal importance of MYOCD in driving CSCs toward a cardiac muscle fate.

  6. [Analysis of antibodies of poliviruses in persistent populations in Beijing, 2012].

    PubMed

    Zhang, Zhu Jiazi; Zhang, Herun; Li, Renqing; Zeng, Yang; Li, Xiaomei; Pan, Jingbin; Sun, Hao; Wang, Zhongzhan; Guo, Fangru; Zhang, Yihua; Wang, Fengshuang; Wu, Tao; Peng, Xinghui; Lu, Li; Pang, Xinghuo

    2014-09-01

    To analyze the polio immunity level of persistent population in Beijing, 2012. A total of 1 676 subjects residing more than 6 months in Beijing were selected by stratified random cluster sampling design in 2012. Demographic characteristics, history of oral poliovirus vaccine (OPV) immunization were investigated by questionnaire. All 5 ml blood sample were collected for testing of polio neutralizing antibody using the method of microcell neutralization. The positive rate and the geometric mean titer (GMT) of polio neutralizing antibody type I, II and III were analyzed in different groups. The positive rate of type I, II and III were 98.2% (1 645/1 676), 98.1% (1 644/1 676), 97.6% (1 635/1 676); The GMT were 1:130.2, 1: 113.4 and 1: 79.7. Three types of positive rates in<15 years group (99.7% (664/666), 99.8% (665/666), 99.5% (663/666)) were higher than those of ≥ 15 years group (97.1% (981/1 010), 96.9% (979/1 010), 96.2% (972/1 010)), the differences were significant (all the values of P < 0.01); The GMT in<15 years group (1:325.9, 1:250.5, 1:190.7) were higher than that of ≥ 15 years group (1: 71.1, 1: 67.2, 1: 44.8), the difference was significant (all the values of P < 0.01). The positive rate (99.0%-100%) and GMT (1: 128.8-1: 300.7) in vaccination information confirmed population were higher. The highest positive rate (all were 100%) and GMT(1: 409.7-1: 636.7) were observed in children who vaccinated three times. The polio antibody of healthy population was at a high level in Beijing in 2012; Especially the age groups of < 15 years which were covered by vaccines.Immunization barrier had been formed firmly to interrupt the transmission of wild poliovirus and vaccine-derived poliovirus.

  7. Observations of Inertio-Gravity Waves in the Wake of Hurricane Frederic.

    DTIC Science & Technology

    1983-12-01

    Prederic passed within 80 to 130 km .4.1-4, 13 S4 W. W. of the array sites (Fig. 1) at 2100 GMT 12 September. Five hours later, Frederic made landfall... Prederic from a GOES satellite at 2001 GMT 12 September clearly delineates a well developed eye of about • % 140 tc 50 km in diameter (Figure 2). The...Renvick, 1981, Buoy observations during the passage of hurricane Prederic 1979, Data Report, NOA Data Buoy Cffice, NSTL Station, Hississippi. Kase, R. H

  8. Diagnosing development. II - A study of rapid cyclone development using analyzed data fields

    NASA Technical Reports Server (NTRS)

    Smith, Phillip; Lupo, Anthony; Zwack, Peter

    1991-01-01

    A diagnosis is presented of the explosive development phase of a cyclone that occurred over the southeastern U.S. during the 24 hour period 1200 GMT January 20 to 1200 GMT January 21, 1979. The Zwack-Osossi development equation is extended to incorporate geostrophic and ageostrophic forcing of the basic development parameter, geostrophic vorticity tendency. This equation yields reasonable comparability with observed geostrophic vorticity changes and shows positive vorticity advection, latent heat release and thermal advection to be the primary development mechanisms.

  9. Direct Reprogramming of Human Fibroblasts toward a Cardiomyocyte-like State

    PubMed Central

    Fu, Ji-Dong; Stone, Nicole R.; Liu, Lei; Spencer, C. Ian; Qian, Li; Hayashi, Yohei; Delgado-Olguin, Paul; Ding, Sheng; Bruneau, Benoit G.; Srivastava, Deepak

    2013-01-01

    Summary Direct reprogramming of adult somatic cells into alternative cell types has been shown for several lineages. We previously showed that GATA4, MEF2C, and TBX5 (GMT) directly reprogrammed nonmyocyte mouse heart cells into induced cardiomyocyte-like cells (iCMs) in vitro and in vivo. However, GMT alone appears insufficient in human fibroblasts, at least in vitro. Here, we show that GMT plus ESRRG and MESP1 induced global cardiac gene-expression and phenotypic shifts in human fibroblasts derived from embryonic stem cells, fetal heart, and neonatal skin. Adding Myocardin and ZFPM2 enhanced reprogramming, including sarcomere formation, calcium transients, and action potentials, although the efficiency remained low. Human iCM reprogramming was epigenetically stable. Furthermore, we found that transforming growth factor β signaling was important for, and improved the efficiency of, human iCM reprogramming. These findings demonstrate that human fibroblasts can be directly reprogrammed toward the cardiac lineage, and lay the foundation for future refinements in vitro and in vivo. PMID:24319660

  10. Manufacture of a 1.7m prototype of the GMT primary mirror segments

    NASA Astrophysics Data System (ADS)

    Martin, H. M.; Burge, J. H.; Miller, S. M.; Smith, B. K.; Zehnder, R.; Zhao, C.

    2006-06-01

    We have nearly completed the manufacture of a 1.7 m off-axis mirror as part of the technology development for the Giant Magellan Telescope. The mirror is an off-axis section of a 5.3 m f/0.73 parent paraboloid, making it roughly a 1:5 model of the outer 8.4 m GMT segment. The 1.7 m mirror will be the primary mirror of the New Solar Telescope at Big Bear Solar Observatory. It has a 2.7 mm peak-to-valley departure from the best-fit sphere, presenting a serious challenge in terms of both polishing and measurement. The mirror was polished with a stressed lap, which bends actively to match the local curvature at each point on the mirror surface, and works for asymmetric mirrors as well as symmetric aspheres. It was measured using a hybrid reflective-diffractive null corrector to compensate for the mirror's asphericity. Both techniques will be applied in scaled-up versions to the GMT segments.

  11. The New Era of Treatment for Obesity and Metabolic Disorders: Evidence and Expectations for Gut Microbiome Transplantation

    PubMed Central

    Jayasinghe, Thilini N.; Chiavaroli, Valentina; Holland, David J.; Cutfield, Wayne S.; O'Sullivan, Justin M.

    2016-01-01

    Key Points The microbiome has been implicated in the development of obesity.Conventional therapeutic methods have limited effectiveness for the treatment of obesity and prevention of related complications.Gut microbiome transplantation may represent an alternative and effective therapy for the treatment of obesity. Obesity has reached epidemic proportions. Despite a better understanding of the underlying pathophysiology and growing treatment options, a significant proportion of obese patients do not respond to treatment. Recently, microbes residing in the human gastrointestinal tract have been found to act as an “endocrine” organ, whose composition and functionality may contribute to the development of obesity. Therefore, fecal/gut microbiome transplantation (GMT), which involves the transfer of feces from a healthy donor to a recipient, is increasingly drawing attention as a potential treatment for obesity. Currently the evidence for GMT effectiveness in the treatment of obesity is preliminary. Here, we summarize benefits, procedures, and issues associated with GMT, with a special focus on obesity. PMID:26925392

  12. Préoccupations de carrière chez les médecins de travail des groupements de Médecine de travail en Tunisie

    PubMed Central

    Merchaoui, Irtyah; Chouchène, Asma; Bouanène, Ines; Chaari, Néila; Zrafi, Wassim; Henchi, Adnène; Akrout, Mohamed; Amri, Charfeddine

    2017-01-01

    Introduction L'insatisfaction de carrière des médecins de travail (MT) peut influencer leur performance et la qualité des prestations fournies. L'objectif de notre étude est d'évaluer la satisfaction au travail des MT du terrain de l'ensemble des Groupements de médecine de travail (GMT) de la Tunisie et préciser les facteurs déterminants. Méthodes Il s'agit d'une étude nationale transversale portant sur les MT de 22 GMT, basée sur le questionnaire, validé SAPHORA JOB. Résultats 58% des MT des GMT étaient insatisfaits de leur carrière. La satisfaction de carrière était statistiquement influencée par le nombre d'entreprises en charge (p=0,016), l'organisation du travail (p=0,010),le ressenti du métier (p=0,011),le salaire (p‹10-3) et l'information sur la réglementation en vigueur (p=0,047). Conclusion L'homogénéisation des grilles salariales et des échelons de carrière des MT des GMT basée sur une révision des textes législatifs est indiquée. L'amélioration de l'organisation et des conditions de travail peut permettre un épanouissement au travail et une amélioration des prestations. PMID:28819472

  13. Five-year immunity persistence following immunization with inactivated enterovirus 71 type (EV71) vaccine in healthy children: A further observation.

    PubMed

    Hu, Yuemei; Zeng, Gang; Chu, Kai; Zhang, Jing; Han, Weixiao; Zhang, Ying; Li, Jing; Zhu, Fengcai

    2018-02-26

    The longevity of antibodies induced by inactivated enterovirus 71 type (EV71) vaccine is not well studied. To estimate the immunity persistence following two-dose vaccination of EV71 vaccine, a five-year follow-up study was conducted as an extension of a Phase III clinical trial. In this study, a sub-cohort of volunteers who was eligible for enrollment and randomly administrated either 2 dose EV71 vaccine or placebo in the phase III clinical trial was selected, and then further observed 64 months post the 1st vaccination. 211 Subjects (106 vaccine subjects and 105 placebo subjects) who provided a full series of blood samples (at all the sampling points) were included in the final analyzed population. Seropositive rate (SR) and geometric mean titer (GMT) of the neutralizing antibodies (NAb) was calculated to detect the dynamic profiles of EV71 vaccine-induced immunogenicity. SR at the 5th year remained 94.34% in the vaccine subjects, with a GMT of 141.42. The SR was 71.43% in the placebo subjects, with a GMT of 71.83. Despite natural infection consistently promoted the NAb increase in the placebo subjects, the SR and GMT in vaccine subjects remained significantly higher than that in the placebo subjects at all the sampling points. The inactivated EV71 vaccine-induced immunity had a good persistence, within 5 years following the primary vaccination.

  14. Submental Ultrasonographic Parameters among Patients with Obstructive Sleep Apnea.

    PubMed

    Bilici, Suat; Engin, Acioglu; Ozgur, Yigit; Ozlem Onerci, Celebi; Ahmet Gorkem, Yasak; Aytul Hande, Yardimci

    2017-03-01

    Objective This study aimed to determine the value of submental ultrasonography (US) parameters for diagnostic workup among patients with obstructive sleep apnea (OSA) and to determine whether there is a correlation between US findings and the severity of OSA. Study Design Cross-sectional analysis. Setting Tertiary education hospital. Subjects and Methods The study included 147 patients with suspected OSA who underwent submental US to evaluate various parameters following overnight polysomnography. US findings were compared with the apnea-hypopnea index and other parameters. Results All US parameters, except for subcutaneous tissue thickness, were significantly different among patients with OSA. Of note, distance between lingual arteries (DLA), geniohyoid muscle thickness (GMT), and lateral parapharyngeal wall thickness (LPWT) were significantly greater in the patients with severe OSA than those with mild and moderate OSA ( P < .001). GMT had the strongest correlation with OSA ( r = 0.419, P < .001); LPWT and DLA also had high correlation coefficient values ( r = 0.343, P < .001, and r = 0.342, P < .001, respectively). Stepwise regression analysis showed that GMT (beta = 0.243, P = 0.004), LPWT (beta = 0.236, P = 0.004), and DLA (beta = 0.204, P = 0.008) were the most significant factors for predicting the severity of OSA according to the apnea-hypopnea index. Conclusion Submental US can be used to determine whether there is a correlation between US findings and severity of OSA. GMT could be considered a novel parameter for determining the severity of OSA.

  15. Phenolics from Garcinia mangostana Inhibit Advanced Glycation Endproducts Formation: Effect on Amadori Products, Cross-Linked Structures and Protein Thiols.

    PubMed

    Abdallah, Hossam M; El-Bassossy, Hany; Mohamed, Gamal A; El-Halawany, Ali M; Alshali, Khalid Z; Banjar, Zainy M

    2016-02-22

    Accumulation of Advanced Glycation Endproducts (AGEs) in body tissues plays a major role in the development of diabetic complications. Here, the inhibitory effect of bioactive metabolites isolated from fruit hulls of Garcinia mangostana on AGE formation was investigated through bio-guided approach using aminoguanidine (AG) as a positive control. Including G. mangostana total methanol extract (GMT) in the reaction mixture of bovine serum albumin (BSA) and glucose or ribose inhibited the fluorescent and non-fluorescent AGEs formation in a dose dependent manner. The bioassay guided fractionation of GMT revealed isolation of four bioactive constituents from the bioactive fraction; which were identified as: garcimangosone D (1), aromadendrin-8-C-glucopyranoside (2), epicatechin (3), and 2,3',4,5',6-pentahydroxybenzophenone (4). All the tested compounds significantly inhibited fluorescent and non-fluorescent AGEs formation in a dose dependent manner whereas compound 3 (epicatechin) was found to be the most potent. In search for the level of action, addition of GMT, and compounds 2-4 inhibited fructosamine (Amadori product) and protein aggregation formation in both glucose and ribose. To explore the mechanism of action, it was found that addition of GMT and only compound (3) to reaction mixture increased protein thiol in both glucose and ribose while compounds 1, 2 and 4 only increased thiol in case of ribose. In conclusion, phenolic compounds 1-4 inhibited AGEs formation at the levels of Amadori product and protein aggregation formation through saving protein thiol.

  16. Seroepidemiologic Survey of Varicella-Zoster Virus in Korean Adults Using Glycoprotein Enzyme Immuno Assay and Fluorescent Antibody to Membrane Antigen Test

    PubMed Central

    Kim, Yun Hwa; Hwang, Ji Young; Lee, Kyung Min; Choi, Jin Hee; Lee, Tae Yoon; Choi, Jong Soo

    2011-01-01

    Background Herpes zoster (HZ) occurs mainly in the elderly and Korea is rapidly becoming an aging society. Therefore, it is important to know the immune status against varicella-zoster virus (VZV) in Korean adults to prevent the disease. Objective The aim of this study was to survey the immune status of Korean adults over 40 years of age against VZV. Methods Antibody titer was measured using a VaccZyme™ VZV glycoprotein enzyme immunoassay (gpEIA) (Binding Site, UK). Fluorescent antibody to membrane antigen (FAMA) test was performed to measure the seropositive rate. Results HZ incidence in the 214 adults enrolled in this study was 10.3%. The gpEIA geometric mean titer (GMT) was 490 mIU/ml and 90.2% of the subjects had a protective level of gpEIA antibody titer against varicella. The average gpEIA GMT of adults who previously had HZ was 1,122 mIU/ml, which was higher than the average gpEIA GMT of 457 mIU/ml in adults who had not had HZ. The FAMA positive rate was 98.6%. Conclusion Most (90.2%) Korean adults ≥40-years-of-age have a protective level of gpEIA antibody against varicella and 98.6% were FAMA seropositive. The GMT of gpEIA antibody was significantly increased with age, and was higher in adults with a history of HZ. PMID:21738361

  17. Using computer-based video analysis in the study of fidgety movements.

    PubMed

    Adde, Lars; Helbostad, Jorunn L; Jensenius, Alexander Refsum; Taraldsen, Gunnar; Støen, Ragnhild

    2009-09-01

    Absence of fidgety movements (FM) in high-risk infants is a strong marker for later cerebral palsy (CP). FMs can be classified by the General Movement Assessment (GMA), based on Gestalt perception of the infant's movement pattern. More objective movement analysis may be provided by computer-based technology. The aim of this study was to explore the feasibility of a computer-based video analysis of infants' spontaneous movements in classifying non-fidgety versus fidgety movements. GMA was performed from video material of the fidgety period in 82 term and preterm infants at low and high risks of developing CP. The same videos were analysed using the developed software called General Movement Toolbox (GMT) with visualisation of the infant's movements for qualitative analyses. Variables derived from the calculation of displacement of pixels from one video frame to the next were used for quantitative analyses. Visual representations from GMT showed easily recognisable patterns of FMs. Of the eight quantitative variables derived, the variability in displacement of a spatial centre of active pixels in the image had the highest sensitivity (81.5) and specificity (70.0) in classifying FMs. By setting triage thresholds at 90% sensitivity and specificity for FM, the need for further referral was reduced by 70%. Video recordings can be used for qualitative and quantitative analyses of FMs provided by GMT. GMT is easy to implement in clinical practice, and may provide assistance in detecting infants without FMs.

  18. Science capabilities of the Maunakea Spectroscopic Explorer

    NASA Astrophysics Data System (ADS)

    Devost, Daniel; McConnachie, Alan; Flagey, Nicolas; Cote, Patrick; Balogh, Michael; Driver, Simon P.; Venn, Kim

    2017-01-01

    The Maunakea Spectroscopic Explorer (MSE) project will transform the CFHT 3.6m optical telescope into a 10m class dedicated multiobject spectroscopic facility, with an ability to simultaneously measure thousands of objects with a spectral resolution range spanning 2,000 to 20,000. The project is currently in design phase, with full science operations nominally starting in 2025. MSE will enable transformational science in areas as diverse as exoplanetary host characterization; stellar monitoring campaigns; tomographic mapping of the interstellar and intergalactic media; the in-situ chemical tagging of the distant Galaxy; connecting galaxies to the large scale structure of the Universe; measuring the mass functions of cold dark matter sub-halos in galaxy and cluster-scale hosts; reverberation mapping of supermassive black holes in quasars. MSE is an essential follow-up facility to current and next generations of multi-wavelength imaging surveys, including LSST, Gaia, Euclid, eROSITA, SKA, and WFIRST, and is an ideal feeder facility for E-ELT, TMT and GMT. I will give an update on the status of the project and review some of the most exciting scientific capabilities of the observatory.

  19. Navy Tactical Applications Guide. Volume 7. Southern Hemisphere Weather Analysis and Forecast Applications

    DTIC Science & Technology

    1989-10-01

    R2). The 500-mb analysis (Fig. IB-22a) during the winter season. Several important differ - has been reanalyzed to fit the satellite image data. ences...EARI AIM 21 JV! so% +20 7 +818 +765 16 SURFACE 86072012Z One Ica us Figure IB-27a. FNOC Surface Analysis . 1200 GMT 20 July 19...and the high and is also shown by the 0000 GMT surface is not a result of the blocking pattern. The axis of the high analysis . The cloud vortex

  20. The opto-mechanical design of the GMT-Consortium Large Earth Finder (G-CLEF)

    NASA Astrophysics Data System (ADS)

    Mueller, Mark; Szentgyorgyi, Andrew; Baldwin, Daniel; Bean, Jacob; Ben-Ami, Sagi; Brennan, Patricia; Budynkiewicz, J.; Chun, Moo-Yung; Crane, Jeffrey D.; Epps, Harland; Evans, Ian; Evans, Janet; Foster, Jeff; Frebel, Anna; Gauron, Thomas; Glenday, Alex; Hare, Tyson; Jang, Bi-Ho; Jang, Jeong-Gyun; Jordan, Andreas; Kim, Jihun; Kim, Kang-Min; Mendes de Oliveira, Claudia; Lopez-Morales, Mercedes; McCracken, Kenneth; McMuldroch, Stuart; Miller, Joseph; Oh, Jae Sok; Onyuksel, Cem; Ordway, Mark; Park, Chan; Park, Sung-Joon; Paxson, Charles; Phillips, David; Plummer, David; Podgorski, William; Seifahrt, Andreas; Steiner, Joao; Uomoto, Alan; Walsworth, Ronald; Yu, Young-Sam

    2016-08-01

    The GMT-Consortium Large Earth Finder (G-CLEF) is a fiber-fed, optical echelle spectrograph selected as the first light instrument for the Giant Magellan Telescope (GMT) now under construction at the Las Campanas Observatory in Chile. G-CLEF has been designed to be a general-purpose echelle spectrograph with precision radial velocity (PRV) capability for exoplanet detection. The radial velocity (RV) precision goal of G-CLEF is 10 cm/sec, necessary for detection of Earth-sized exoplanets. This goal imposes challenging stability requirements on the optical mounts and the overall spectrograph support structures especially when considering the instrument's operational environment. The accuracy of G-CLEF's PRV measurements will be influenced by minute changes in temperature and ambient air pressure as well as vibrations and micro gravity-vector variations caused by normal telescope slewing. For these reasons we have chosen to enclose G-CLEF's spectrograph in a well-insulated, vibration isolated vacuum chamber in a gravity invariant location on GMT's azimuth platform. Additional design constraints posed by the GMT telescope include: a limited space envelope, a thermal emission ceiling, and a maximum weight allowance. Other factors, such as manufacturability, serviceability, available technology and budget are also significant design drivers. All of the above considerations must be managed while ensuring performance requirements are achieved. In this paper, we discuss the design of G-CLEF's optical mounts and support structures including the choice of a low coefficient of thermal expansion (CTE) carbon-fiber optical bench to minimize the system's sensitivity to thermal soaks and gradients. We discuss design choices made to the vacuum chamber geared towards minimize the influence of daily ambient pressure variations on image motion during observation. We discuss the design of G-CLEF's insulated enclosure and thermal control systems which will maintain the spectrograph at milli-Kelvin level stability while simultaneously limiting thermal emissions into the telescope dome. Also discussed are micro gravity-vector variations caused by normal telescope slewing, their uncorrected influence on image motion, and how they are dealt with in the design. Finally, we discuss G-CLEF's front-end assembly and fiber-feed system as well as other interface challenges presented by the telescope, enclosure and neighboring instrumentation.

  1. Risk behaviours and prevalence of sexually transmitted infections and HIV in a group of Dominican gay men, other men who have sex with men and transgender women.

    PubMed

    Brito, Maximo O; Hodge, David; Donastorg, Yeycy; Khosla, Shaveta; Lerebours, Leonel; Pope, Zachary

    2015-04-29

    The objectives of this study were to estimate the point prevalence of sexually transmitted infection (STI) and to investigate the sexual practices and behaviours associated with STIs in a group of gay men, other men who have sex with men and transgender women (GMT) in the province of La Romana, Dominican Republic. A cross-sectional study of a convenience sample of GMT persons. The study was conducted in the province of La Romana, Dominican Republic, in June-July 2013. Out of 117 GMT persons screened, a total of 100 completed the study. Participants had to be at least 18 years of age, reside in La Romana and have had sex with another man in the preceding 12 months. All participants were interviewed and tested for STI. The main outcome of interest was the detection of any STI (HIV, herpes simplex virus type 2 (HSV-2), syphilis, hepatitis B or C) by serology. Among 100 participants, the median age was 22 years (range 18-65). One-third had consumed illicit drugs the preceding year and only 43% consistently used condoms. Prevalence was 38% for HSV-2, 5% for HIV and 13% for syphilis. There were no cases of hepatitis B or C. Factors associated with the odds of a STI were age >22 years (OR=11.1, 95% CI 3.6 to 34.5), receptive anal intercourse (OR=4.2, 95% CI 1.3 to 13.6) and having ≥2 male sexual partners during the preceding month (OR=4, 95% CI 1.3 to 12.5). In this group of GMT persons, seroprevalence of STI was high, and a number of risk behaviours were associated with STI. These preliminary data will help inform policy and programmes to prevent HIV/STI in GMT persons in the region. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions.

  2. Optomechanical design concept for GMACS: a wide-field multi-object moderate resolution optical spectrograph for the Giant Magellan Telescope (GMT)

    NASA Astrophysics Data System (ADS)

    Smee, Stephen A.; Prochaska, Travis; Shectman, Stephen A.; Hammond, Randolph P.; Barkhouser, Robert H.; DePoy, D. L.; Marshall, J. L.

    2012-09-01

    We describe the conceptual optomechanical design for GMACS, a wide-field, multi-object, moderate-resolution optical spectrograph for the Giant Magellan Telescope (GMT). GMACS is a candidate first-light instrument for the GMT and will be one of several instruments housed in the Gregorian Instrument Rotator (GIR) located at the Gregorian focus. The instrument samples a 9 arcminute x 18 arcminute field of view providing two resolution modes (i.e, low resolution, R ~ 2000, and moderate resolution, R ~ 4000) over a 3700 Å to 10200 Å wavelength range. To minimize the size of the optics, four fold mirrors at the GMT focal plane redirect the full field into four individual "arms", that each comprises a double spectrograph with a red and blue channel. Hence, each arm samples a 4.5 arcminute x 9 arcminute field of view. The optical layout naturally leads to three separate optomechanical assemblies: a focal plane assembly, and two identical optics modules. The focal plane assembly contains the last element of the telescope's wide-field corrector, slit-mask, tent-mirror assembly, and slit-mask magazine. Each of the two optics modules supports two of the four instrument arms and houses the aft-optics (i.e. collimators, dichroics, gratings, and cameras). A grating exchange mechanism, and articulated gratings and cameras facilitate multiple resolution modes. In this paper we describe the details of the GMACS optomechanical design, including the requirements and considerations leading to the design, mechanism details, optics mounts, and predicted flexure performance.

  3. Dry dock gate stability modelling

    NASA Astrophysics Data System (ADS)

    Oktoberty; Widiyanto; Sasono, E. J.; Pramono, S.; Wandono, A. T.

    2018-03-01

    The development of marine transportation needs in Indonesia increasingly opens national shipyard business opportunities to provide shipbuilding services to the shipbuilding vessels. That emphasizes the stability of prime. The ship's decking door becomes an integral part of the efficient place and the specification of the use of the asset of its operational ease. This study aims to test the stability of Dry Dock gate with the length of 35.4 meters using Maxsurf and Hydromax in analyzing the calculation were in its assessment using interval per 500 mm length so that it can get detail data toward longitudinal and transverse such as studying Ship planning in general. The test result shows dry dock gate meets IMO standard with ballast construction containing 54% and 68% and using fix ballast can produce GMt 1,924 m, tide height 11,357m. The GMt value indicates dry dick gate can be stable and firmly erect at the base of the mouth dry dock. When empty ballast produces GMt 0.996 which means dry dock date is stable, but can easily be torn down. The condition can be used during dry dock gate treatment.

  4. "Slit Mask Design for the Giant Magellan Telescope Multi-object Astronomical and Cosmological Spectrograph"

    NASA Astrophysics Data System (ADS)

    Williams, Darius; Marshall, Jennifer L.; Schmidt, Luke M.; Prochaska, Travis; DePoy, Darren L.

    2018-01-01

    The Giant Magellan Telescope Multi-object Astronomical and Cosmological Spectrograph (GMACS) is currently in development for the Giant Magellan Telescope (GMT). GMACS will employ slit masks with a usable diameter of approximately 0.450 m for the purpose of multi-slit spectroscopy. Of significant importance are the design constraints and parameters of the multi-object slit masks themselves as well as the means for mapping astronomical targets to physical mask locations. Analytical methods are utilized to quantify deformation effects on a potential slit mask due to thermal expansion and vignetting of target light cones. Finite element analysis (FEA) is utilized to simulate mask flexure in changing gravity vectors. The alpha version of the mask creation program for GMACS, GMACS Mask Simulator (GMS), a derivative of the OSMOS Mask Simulator (OMS), is introduced.

  5. NASA's AVE 7 experiment: 25-mb sounding data

    NASA Technical Reports Server (NTRS)

    Davis, J. G.; Fuelberg, H. E.; Turner, R. E.

    1978-01-01

    The AVE 7 Experiment is described and tabulated rawinsonde data at 25 mb internals from the surface to 25 mb for the 24 stations participating in the experiment are presented. Soundings were taken between 0000GMT May 2 and 1200 GMT May 3, 1978. The methods of data processing and the accuracy are briefly discussed. Selected synoptic charts prepared from the data are presented as well as an example of contact data. A tabulation of adverse weather events that occured during the AVE 7 period, including freezing temperature, snow, tornadoes, damaging winds, and flooding, is presented.

  6. STS-108 Endeavour Launch from Pad 39-B

    NASA Technical Reports Server (NTRS)

    2001-01-01

    KENNEDY SPACE CENTER, Fla. -- Space Shuttle Endeavour soars into a twilight sky on mission STS-108, the second attempt over two days. Liftoff occurred at 5:19:28 p.m. EST (10:19.28 GMT). Endeavour will dock with the International Space Station on Dec. 7. STS-108 is the final Shuttle mission of 2001and the 107th Shuttle flight overall. It is the 12th flight to the Space Station. Landing of the orbiter at KSC's Shuttle Landing Facility is targeted for 1:05 p.m. EST (6:05 p.m. GMT) Dec. 16.

  7. Wet-Bulb-Globe Temperature Data Report

    DTIC Science & Technology

    2015-03-01

    Hour Min Pressure Dry Nat Wet Globe Dry Nat Wet Globe Dry Nat Wet Globe Wind Cld amt Cld type Obscuration Quest RH Kestrel RH VPSc RH S1 WBGT Q WBGT...Wet Globe Dry Nat Wet Globe Dry Nat Wet Globe Wind Cld amt Cld type Obscuration Quest RH Kestrel RH VPSc RH S1 WBGT Q WBGT K2 WBGT GMT millibars deg F...Dry Nat Wet Globe Dry Nat Wet Globe Wind Cld amt Cld type Obscuration Quest RH Kestrel RH VPSc RH S1 WBGT Q WBGT K2 WBGT GMT millibars deg F deg F deg

  8. The Use of Interactive Graphics Processing in Short-Range Terminal Weather Forecasting: An Initial Assessment.

    DTIC Science & Technology

    1983-03-31

    Height Analysis for 000 GMT, 22 Deec 1981 41 " 4 : "-6 ".. * °5 * d ... FORECAST EXPERIMENT 10: At 04 GMT 6 April 1982 a developing cvcont’ was moving...distribution of precipitation, Mlon. Wea. Rev., 107:5:-67. 140 Appendix C Inland Cyclogenesis Decision Assistance Procedure CI1. II II. N1 N(:Y(:lA4)(; %I~SI...cyclogenesis. 149 . .. ... . ,,. - 7 72 500 millibar heightt contours ". 500 millibar vorticity contours . L Surface Cyclone Fizue (2. N1 (’ridia i -I rough C(I

  9. AVE-SESAME IV: 25 mb sounding data

    NASA Technical Reports Server (NTRS)

    Sienkiewicz, M. E.; Gilchrist, L. P.; Turner, R. E.

    1980-01-01

    The rawinsonde sounding program for the AVE-SESAME 4 experiment is descirbed and tabulated data at 25 mb for the 23 National Weather Service and 20 special stations participating in the experiment are presented. Soundings were taken at 3 hr intervals beginning at 1200 GMT on May 9, 1979, and ending at 1200 GMT on May 10, 1979 (nine sounding times). The method of processing is discussed, estimates of the rms errors in the data are presented, and an example of contact data is given. Reasons are given for the termination of soundings below 100 mb, and soundings are listed which exhibit abnormal characteristics.

  10. Goal Management Training Combined With External Cuing as a Means to Improve Emotional Regulation, Psychological Functioning, and Quality of Life in Patients With Acquired Brain Injury: A Randomized Controlled Trial.

    PubMed

    Tornås, Sveinung; Løvstad, Marianne; Solbakk, Anne-Kristin; Schanke, Anne-Kristine; Stubberud, Jan

    2016-11-01

    To investigate whether goal management training (GMT) expanded to include external cuing and an emotional regulation module is associated with improved emotional regulation, psychological functioning, and quality of life (QOL) after chronic acquired brain injury (ABI). Randomized controlled trial with blinded outcome assessment at baseline, posttraining, and 6-month follow-up. Outpatient. Persons with ABI and executive dysfunction (N=70; 64% traumatic brain injury; 52% men; mean age ± SD, 43±13y; mean time since injury ± SD, 8.1±9.4y). Eight sessions of GMT in groups, including a new module addressing emotional regulation, and external cuing. A psychoeducative control condition (Brain Health Workshop) was matched on amount of training, therapist contact, and homework. Emotional regulation was assessed with the Brain Injury Rehabilitation Trust Regulation of Emotions Questionnaire, the Emotional Control subscale and the Emotion Regulation factor (Behavior Rating Inventory of Executive Function-Adult Version), and the Positive and Negative Affect subscales from the Dysexecutive Questionnaire. Secondary outcome measures included psychological distress (Hopkins Symptom Checklist-25) and QOL (Quality of Life After Brain Injury Scale). Findings indicated beneficial effects of GMT on emotional regulation skills in everyday life and in QOL 6 months posttreatment. No intervention effects on measures of psychological distress were registered. GMT is a promising intervention for improving emotional regulation after ABI, even in the chronic phase. More research using objective measures of emotional regulation is needed to investigate the efficacy of this type of training. Copyright © 2016 American Congress of Rehabilitation Medicine. Published by Elsevier Inc. All rights reserved.

  11. Alignment and use of the optical test for the 8.4-m off-axis primary mirrors of the Giant Magellan Telescope

    NASA Astrophysics Data System (ADS)

    West, S. C.; Burge, J. H.; Cuerden, B.; Davison, W.; Hagen, J.; Martin, H. M.; Tuell, M. T.; Zhao, C.; Zobrist, T.

    2010-07-01

    The Giant Magellan Telescope has a 25 meter f/0.7 near-parabolic primary mirror constructed from seven 8.4 meter diameter segments. Several aspects of the interferometric optical test used to guide polishing of the six off-axis segments go beyond the demonstrated state of the art in optical testing. The null corrector is created from two obliquelyilluminated spherical mirrors combined with a computer-generated hologram (the measurement hologram). The larger mirror is 3.75 m in diameter and is supported at the top of a test tower, 23.5 m above the GMT segment. Its size rules out a direct validation of the wavefront produced by the null corrector. We can, however, use a reference hologram placed at an intermediate focus between the two spherical mirrors to measure the wavefront produced by the measurement hologram and the first mirror. This reference hologram is aligned to match the wavefront and thereby becomes the alignment reference for the rest of the system. The position and orientation of the reference hologram, the 3.75 m mirror and the GMT segment are measured with a dedicated laser tracker, leading to an alignment accuracy of about 100 microns over the 24 m dimensions of the test. In addition to the interferometer that measures the GMT segment, a separate interferometer at the center of curvature of the 3.75 m sphere monitors its figure simultaneously with the GMT measurement, allowing active correction and compensation for residual errors. We describe the details of the design, alignment, and use of this unique off-axis optical test.

  12. STS-108 Endeavour Launch from Pad 39-B

    NASA Technical Reports Server (NTRS)

    2001-01-01

    STS-108 Endeavour Launch from Pad 39-B KSC-01PD-1785 KENNEDY SPACE CENTER, Fla. -- Space Shuttle Endeavour soars into a twilight sky on mission STS-108, the second attempt over two days. Liftoff occurred at 5:19:28 p.m. EST (10:19.28 GMT). Endeavour will dock with the International Space Station on Dec. 7. STS-108 is the final Shuttle mission of 2001and the 107th Shuttle flight overall. It is the 12th flight to the Space Station. Landing of the orbiter at KSC's Shuttle Landing Facility is targeted for 1:05 p.m. EST (6:05 p.m. GMT) Dec. 16.

  13. AVE-Sesame 3: 25-MB sounding data

    NASA Technical Reports Server (NTRS)

    Williams, S. T.; Gerhard, M. L.; Gilchrist, L. P.; Turner, R. E.

    1980-01-01

    The rawinsonde sounding program for the AVE-SESAME 3 experiment is described and tabulated data at 25-mb intervals from the surface to 25 mb for the 23 National Weather Service and 19 special stations participating in the experiment are presented. Soundings were taken at 3 hr intervals beginning at 1200 GMT on April 25, 1979, and ending at 1200 GMT on April 26, 1979 (nine sounding times). The method of processing is discussed briefly, estimates of the rms errors in the data presented, an example of contact data given, reasons given for the termination of soundings below 100 mb, and soundings listed which exhibit abnormal characteristics.

  14. STS-108 Endeavour Launch from Pad 39-B

    NASA Technical Reports Server (NTRS)

    2001-01-01

    STS-108 Endeavour Launch from Pad 39-B KSC-01PD-1786 KENNEDY SPACE CENTER, Fla. -- Like a lighted taper, Space Shuttle Endeavour shines atop its twisted contrail as it soars into space on mission STS-108. Liftoff occurred at 5:19:28 p.m. EST (10:19.28 GMT). Endeavour will dock with the International Space Station on Dec. 7. STS-108 is the final Shuttle mission of 2001and the 107th Shuttle flight overall. It is the 12th flight to the Space Station. Landing of the orbiter at KSC's Shuttle Landing Facility is targeted for 1:05 p.m. EST (6:05 p.m. GMT) Dec. 16.

  15. End-to-end observatory software modeling using domain specific languages

    NASA Astrophysics Data System (ADS)

    Filgueira, José M.; Bec, Matthieu; Liu, Ning; Peng, Chien; Soto, José

    2014-07-01

    The Giant Magellan Telescope (GMT) is a 25-meter extremely large telescope that is being built by an international consortium of universities and research institutions. Its software and control system is being developed using a set of Domain Specific Languages (DSL) that supports a model driven development methodology integrated with an Agile management process. This approach promotes the use of standardized models that capture the component architecture of the system, that facilitate the construction of technical specifications in a uniform way, that facilitate communication between developers and domain experts and that provide a framework to ensure the successful integration of the software subsystems developed by the GMT partner institutions.

  16. Reprogramming of mouse fibroblasts into cardiomyocyte-like cells in vitro.

    PubMed

    Qian, Li; Berry, Emily C; Fu, Ji-dong; Ieda, Masaki; Srivastava, Deepak

    2013-06-01

    Cardiac fibroblasts can be reprogrammed to cardiomyocyte-like cells by the introduction of three transcription factors: Gata4, Mef2c and Tbx5 (collectively referred to here as GMT). Resident cardiac fibroblasts can be converted in vivo into induced cardiomyocyte-like cells (iCMs) that closely resemble endogenous cardiomyocytes and electrically integrate with the host myocardium. In contrast, in vitro reprogramming yields many partially reprogrammed iCMs, with a few that reprogram fully into contracting myocytes (~3 out of 10,000 GMT-transduced cells). iCMs can be observed as early as 3 d after viral infection, and they continue to mature over 2 months before beating is observed. Despite the success of multiple groups, the inefficiency of in vitro reprogramming has made it challenging for others. However, given the advantages of in vitro iCMs for performing mechanistic studies and, if refined, for testing drugs or small molecules for personalized medicine and modeling cardiac disease in a dish, it is important to standardize the protocol to improve reproducibility and enhance the technology further. Here we describe a detailed step-by-step protocol for in vitro cardiac reprogramming using retroviruses encoding GMT.

  17. GMT azimuth bogie wheel-rail interface wear study

    NASA Astrophysics Data System (ADS)

    Teran, Jose; Lindh, Cory; Morgan, Chris; Manuel, Eric; Bigelow, Bruce C.; Burgett, William S.

    2016-07-01

    Performance of the GMT azimuth drive system is vital for the operation of the telescope and, as such, all components subject to wear at the drive interface merit a high level of scrutiny for achieving a proper balance between capital costs, maintenance costs, and the risk for downtime during planned and unplanned maintenance or replacement procedures. Of particular importance is the interface between the azimuth wheels and rail, as usage frequency is high, the full weight of the enclosure must be transferred through small patches of contact, and replacement of the rail would pose a greater logistical challenge than the replacement of smaller components such as bearings and gearmotors. This study investigates tradeoffs between various wheel-rail and roller-track interfaces, including performance, complexity, and anticipated wear considerations. First, a survey of railway and overhead crane industry literature is performed and general detailing recommendations are made to minimize wear and the risk of rolling contact fatigue. Second, Adams/VI-Rail is used to simulate lifetime wear of four specific configurations under consideration for the GMT azimuth wheel-rail interface; all studied configurations are shown to be viable, and their relative merits are discussed.

  18. Antibody persistence and serological protection among seasonal 2007 influenza A(H1N1) infected subjects: Results from the FLUREC cohort study.

    PubMed

    Delabre, Rosemary Markovic; Salez, Nicolas; Lemaitre, Magali; Leruez-Ville, Marianne; de Lamballerie, Xavier; Carrat, Fabrice

    2015-12-08

    Haemagglutination-inhibition (HI) antibody titer is a correlate of protection against influenza; its persistence after infection or vaccination is important to determining susceptibility to subsequent infection. Few studies, however, have reported longitudinal data regarding the magnitude and duration of HI protection following natural seasonal influenza A infection. Using French influenza cohort study data collected from 2008 to 2010, we investigated persistence of serological protection among subjects according to influenza-like illness (ILI) and laboratory-confirmed seasonal 2007 influenza A(H1N1) infection status at inclusion in 2008 (ILI-A(H1N1) positive, ILI-A(H1N1) negative, or no-ILI). Antibody titers against seasonal 2007 A(H1N1) were determined using the HI technique for sera. Regression models for interval-censored data were used to estimate geometric mean titers (GMT) for HI assays. A logistic regression model adjusted for age group (subjects <30, 30-50 and >50 years old) was used to quantify the association between HI titer and protection against infection. Based on 310 total subjects, influenza A(H1N1) infection was confirmed in 39 of 115 ILI subjects at inclusion. GMT associated with 50% probability of protection among ILI subjects decreased with age group (subjects <30 yo: GMT of 40.8 was associated with 50% [95CI: 29.3%; 70.7%] probability of protection, subjects 30-50 yo: 26.8 [95CI: 34.4%; 65.6%] and subjects >50 yo: 8.9 [95CI: 15.3%; 84.7%]). GMT declined after the first annual study visit among ILI-A(H1N1) positive subjects but remained higher compared to inclusion at the 2010 study visit (41.5 [95CI: 34.8; 49.5], p=0.0157). GMT remained stable among ILI-A(H1N1) negative subjects (p=0.7502), but decreased among no-ILI subjects (p<0.0001). Our results confirm the positive relationship between HI titer and probability of protection among naturally infected subjects, and provides evidence that protection associated with HI titer varies with age. This longitudinal analysis suggests the rise in HI titers following seasonal 2007 influenza A(H1N1) infection may persist into subsequent influenza seasons. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

  19. The Integration of TLS and Continuous GPS to Study Landslide Deformation: A Case Study at the El Yunque National Forest, Puerto Rico

    NASA Astrophysics Data System (ADS)

    Phillips, D. A.; Wang, G.; Joyce, J.; Rivera, F. O.; Galan, G.; Meertens, C. M.

    2010-12-01

    Terrestrial Laser Scanning (TLS) and Global Positioning System (GPS) technologies provide comprehensive information of landslide deformation in the both spatial and temporal domains, which are critical to study the dynamics and kinematics of landslides. TLS allows the generation of a precise 3D model of a landslide surface by deriving spatial deformation from consecutive TLS campaigns. Continuous GPS (CGPS) monitoring allows the generation of the displacement time series of single points. Integrated TLS and CGPS datasets were collected at the base of a 500-600 meter long landslide on a steep mountain slope in the El Yunque National Rainforest in Puerto Rico. Major movements of this landslide in 2004 and 2005 caused the closing of one of three remaining access roads to the national forest. A retaining wall was constructed to restrain the landslide and allow the road reopen. Prior to termination of the wall a significant portion of the northwest end of the wall failed. This portion was repaired but prior to final termination in August 2009 significant soil displacements behind the failed section thwarted final grading efforts. Geologic investigation indicated that the landslide extended much further upslope than indicated and involved bedrock as well as overlying residual soils. Striations along flank escarpments indicated displacement of the entire landslide to the northwest but active displacement could only be certified in the lower most portions behind the retaining wall. The northwest portion of the wall continued to show flexural deformation until it finally burst in July 2010. The size and displacement magnitude of the presently moving mass has become a major focus of investigation. To precisely identify the present boundaries and displacement magnitude of the lower portions of the landslide, we performed two TLS campaigns at the landslide site in May and August 2010. A continuous GPS array consisting of 3 stations was also installed at the site, one of which was located outside of the landslide as a stable reference point. Topcon GB-1000 dual frequency receivers and PG-A1 antennas were used to collect the GPS data. GPS data were processed using Topcon software. A Riegl VZ-400 laser scanner, provided by UNAVCO, was used to collect the TLS data. This scanner provides high resolution, high-speed data acquisition using a narrow infrared laser beam and a fast scanning mechanism. Centimeter-level scans from 12 scan positions were performed during each TLS campaign. TLS data acquisition and global registration were performed using RIEGL RiSCAN-PRO software. The Generic Mapping Tools (GMT, http://gmt.soest.hawaii.edu), a software package widely utilized in the geophysical community, was used for data post processing and map plotting. Our TLS and GPS results have clearly identified the boundaries, the rate and direction of displacement, and the volume change of the lower portions of presently sliding mass. Rainfall data from a local USGS weather station were also integrated to this study. Our results indicate close correlation between landslide movements and rainfall.

  20. Live from the Seafloor: Seismic Signals associated with the 2015 Eruption of Axial Seamount

    NASA Astrophysics Data System (ADS)

    Wilcock, W. S. D.; Tolstoy, M.; Garcia, C.; Tan, Y. J.; Waldhauser, F.

    2015-12-01

    Axial seamount is the most active volcanic feature on the Juan de Fuca Ridge having previously erupted in 1998 and 2011. In 2014, the Ocean Observatories Initiative installed a multidisciplinary, cabled observatory on Axial seamount that includes a compact network of 7 seismometers spanning the southern half of the summit caldera with another seismometer located at the base of the volcano. Real-time data from the seismic network has been archived at the IRIS Data Management Center from mid-November 2014. We have implemented an automated algorithm to detect earthquakes, pick P and S wave phases, determine hypocenters and estimate magnitudes. Over 5 months to mid-April earthquake rates increased from an average of ~100 per day to >500 per day. Most of the earthquakes were small (MW ≤ 1.5) and occurred in swarms beneath the east and west walls of the caldera at depths clustering around 1.5 km. On April 23, 2015 at 1700-2100 GMT there was a sizeable swarm of earthquakes near the east wall of the caldera with most activity north of the network. The main seismic crisis, which coincided with ~2 m of deflation at the center of the caldera (Nooner et al., this meeting), commenced at 0500 GMT on April 24. For the first 2 hours epicenters were confined near the east wall north of the network. The southern limit of seismicity then migrated ~3 km south over one hour to beneath the network where very high levels of seismicity (~500 per hour) persisted until 1500 GMT. During the seismic crisis, the caldera seismometers were swamped by nearby earthquakes, including ~100 per hour with MW ≥ 2; additional analysis is required to determine if seismicity also migrated outside the caldera. In the following weeks, earthquake rates beneath the caldera decreased to <10 per day. An exciting discovery during this period was the detection of a large number of impulsive water borne signals, each comprising a train of water column multiples with arrival times consistent with sound sources on the seafloor 15-20 km to the north of the network. These events commenced at the end of the seismic crisis, peaked at a rate of >2000 per day on April 26 and continued at decreasing levels until mid-May. Recent seafloor mapping and observations have confirmed that these impulsive events mark the site of an eruption on the north rift of the volcano (Kelley et al., this meeting).

  1. A comparison of observed and forecast energetics over North America

    NASA Technical Reports Server (NTRS)

    Baker, W. E.; Brin, Y.

    1985-01-01

    The observed kinetic energy balance is calculated over North America and compared with that computed from forecast fields for the 13-15 January 1979 cyclone. The FGGE upper-air rawinsonde network serves as the observational database while the forecast energetics are derived from a numerical integration with the GLAS fourth-order general circulation model initialized at 00 GMT 13 January. Maps of the observed and predicted kinetic energy and eddy conversion are in good qualitative agreement, although the model eddy conversion tends to be 2 to 3 times stronger than the observed values. Both the forecast and observations exhibit the lower and upper tropospheric maxima in vertical profiles of kinetic energy generation and dissipation typically found in cyclonic disturbances. An interesting time lag is noted in the observational analysis with the maximum observed kinetic energy occurring 12 h later than the maximum eddy conversion over the same region.

  2. Seismic Waves, 4th order accurate

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    2013-08-16

    SW4 is a program for simulating seismic wave propagation on parallel computers. SW4 colves the seismic wave equations in Cartesian corrdinates. It is therefore appropriate for regional simulations, where the curvature of the earth can be neglected. SW4 implements a free surface boundary condition on a realistic topography, absorbing super-grid conditions on the far-field boundaries, and a kinematic source model consisting of point force and/or point moment tensor source terms. SW4 supports a fully 3-D heterogeneous material model that can be specified in several formats. SW4 can output synthetic seismograms in an ASCII test format, or in the SAC finarymore » format. It can also present simulation information as GMT scripts, whixh can be used to create annotated maps. Furthermore, SW4 can output the solution as well as the material model along 2-D grid planes.« less

  3. Immunogenicity of 2 doses of HPV vaccine in younger adolescents vs 3 doses in young women: a randomized clinical trial.

    PubMed

    Dobson, Simon R M; McNeil, Shelly; Dionne, Marc; Dawar, Meena; Ogilvie, Gina; Krajden, Mel; Sauvageau, Chantal; Scheifele, David W; Kollmann, Tobias R; Halperin, Scott A; Langley, Joanne M; Bettinger, Julie A; Singer, Joel; Money, Deborah; Miller, Dianne; Naus, Monika; Marra, Fawziah; Young, Eric

    2013-05-01

    Global use of human papillomavirus (HPV) vaccines to prevent cervical cancer is impeded by cost. A 2-dose schedule for girls may be possible. To determine whether mean antibody levels to HPV-16 and HPV-18 among girls receiving 2 doses was noninferior to women receiving 3 doses. Randomized, phase 3, postlicensure, multicenter, age-stratified, noninferiority immunogenicity study of 830 Canadian females from August 2007 through February 2011. Follow-up blood samples were provided by 675 participants (81%). Girls (9-13 years) were randomized 1:1 to receive 3 doses of quadrivalent HPV vaccine at 0, 2, and 6 months (n = 261) or 2 doses at 0 and 6 months (n = 259). Young women (16-26 years) received 3 doses at 0, 2, and 6 months (n = 310). Antibody levels were measured at 0, 7, 18, 24, and 36 months. Primary outcome was noninferiority (95% CI, lower bound >0.5) of geometric mean titer (GMT) ratios for HPV-16 and HPV-18 for girls (2 doses) compared with young women (3 doses) 1 month after last dose. Secondary outcomes were noninferiority of GMT ratios of girls receiving 2 vs 3 doses of vaccine; and durability of noninferiority to 36 months. The GMT ratios were noninferior for girls (2 doses) to women (3 doses): 2.07 (95% CI, 1.62-2.65) for HPV-16 and 1.76 (95% CI, 1.41-2.19) for HPV-18. Girls (3 doses) had GMT responses 1 month after last vaccination for HPV-16 of 7736 milli-Merck units per mL (mMU/mL) (95% CI, 6651-8999) and HPV-18 of 1730 mMU/mL (95% CI, 1512-1980). The GMT ratios were noninferior for girls (2 doses) to girls (3 doses): 0.95 (95% CI, 0.73-1.23) for HPV-16 and 0.68 (95% CI, 0.54-0.85) for HPV-18. The GMT ratios for girls (2 doses) to women (3 doses) remained noninferior for all genotypes to 36 months. Antibody responses in girls were noninferior after 2 doses vs 3 doses for all 4 vaccine genotypes at month 7, but not for HPV-18 by month 24 or HPV-6 by month 36. Among girls who received 2 doses of HPV vaccine 6 months apart, responses to HPV-16 and HPV-18 one month after the last dose were noninferior to those among young women who received 3 doses of the vaccine within 6 months. Because of the loss of noninferiority to some genotypes at 24 to 36 months in girls given 2 doses vs 3 doses, more data on the duration of protection are needed before reduced-dose schedules can be recommended. clinicaltrials.gov Identifier: NCT00501137.

  4. FMC: a one-liner Python program to manage, classify and plot focal mechanisms

    NASA Astrophysics Data System (ADS)

    Álvarez-Gómez, José A.

    2014-05-01

    The analysis of earthquake focal mechanisms (or Seismic Moment Tensor, SMT) is a key tool on seismotectonics research. Each focal mechanism is characterized by several location parameters of the earthquake hypocenter, the earthquake size (magnitude and scalar moment tensor) and some geometrical characteristics of the rupture (nodal planes orientations, SMT components and/or SMT main axes orientations). The aim of FMC is to provide a simple but powerful tool to manage focal mechanism data. The data should be input to the program formatted as one of two of the focal mechanisms formatting options of the GMT (Generic Mapping Tools) package (Wessel and Smith, 1998): the Harvard CMT convention and the single nodal plane Aki and Richards (1980) convention. The former is a SMT format that can be downloaded directly from the Global CMT site (http://www.globalcmt.org/), while the later is the simplest way to describe earthquake rupture data. FMC is programmed in Python language, which is distributed as Open Source GPL-compatible, and therefore can be used to develop Free Software. Python runs on almost any machine, and has a wide support and presence in any operative system. The program has been conceived with the modularity and versatility of the classical UNIX-like tools. Is called from the command line and can be easily integrated into shell scripts (*NIX systems) or batch files (DOS/Windows systems). The program input and outputs can be done by means of ASCII files or using standard input (or redirection "<"), standard output (screen or redirection ">") and pipes ("|"). By default FMC will read the input and write the output as a Harvard CMT (psmeca formatted) ASCII file, although other formats can be used. Optionally FMC will produce a classification diagram representing the rupture type of the focal mechanisms processed. In order to count with a detailed classification of the focal mechanisms I decided to classify the focal mechanism in a series of fields that include the oblique slip regimes. This approximation is similar to the Johnston et al. (1994) classification; with 7 classes of earthquakes: 1) Normal; 2) Normal - Strike-slip; 3) Strike-slip - Normal; 4) Strike-slip; 5) Strike-slip - Reverse; 6) Reverse - strike-slip and 7) Reverse. FMC uses by default this classification in the resulting diagram, based on the Kaverina et al. (1996) projection, which improves the Frohlich and Apperson (1992) ternary diagram.

  5. Sea surface velocities from visible and infrared multispectral atmospheric mapping sensor imagery

    NASA Technical Reports Server (NTRS)

    Pope, P. A.; Emery, W. J.; Radebaugh, M.

    1992-01-01

    High resolution (100 m), sequential Multispectral Atmospheric Mapping Sensor (MAMS) images were used in a study to calculate advective surface velocities using the Maximum Cross Correlation (MCC) technique. Radiance and brightness temperature gradient magnitude images were formed from visible (0.48 microns) and infrared (11.12 microns) image pairs, respectively, of Chandeleur Sound, which is a shallow body of water northeast of the Mississippi delta, at 145546 GMT and 170701 GMT on 30 Mar. 1989. The gradient magnitude images enhanced the surface water feature boundaries, and a lower cutoff on the gradient magnitudes calculated allowed the undesirable sunglare and backscatter gradients in the visible images, and the water vapor absorption gradients in the infrared images, to be reduced in strength. Requiring high (greater than 0.4) maximum cross correlation coefficients and spatial coherence of the vector field aided in the selection of an optimal template size of 10 x 10 pixels (first image) and search limit of 20 pixels (second image) to use in the MCC technique. Use of these optimum input parameters to the MCC algorithm, and high correlation and spatial coherence filtering of the resulting velocity field from the MCC calculation yielded a clustered velocity distribution over the visible and infrared gradient images. The velocity field calculated from the visible gradient image pair agreed well with a subjective analysis of the motion, but the velocity field from the infrared gradient image pair did not. This was attributed to the changing shapes of the gradient features, their nonuniqueness, and large displacements relative to the mean distance between them. These problems implied a lower repeat time for the imagery was needed in order to improve the velocity field derived from gradient imagery. Suggestions are given for optimizing the repeat time of sequential imagery when using the MCC method for motion studies. Applying the MCC method to the infrared brightness temperature imagery yielded a velocity field which did agree with the subjective analysis of the motion and that derived from the visible gradient imagery. Differences between the visible and infrared derived velocities were 14.9 cm/s in speed and 56.7 degrees in direction. Both of these velocity fields also agreed well with the motion expected from considerations of the ocean bottom topography and wind and tidal forcing in the study area during the 2.175 hour time interval.

  6. STS-108 Endeavour Launch from Pad 39-B

    NASA Technical Reports Server (NTRS)

    2001-01-01

    STS-108 Endeavour Launch from Pad 39-B KSC-01PD-1787 KENNEDY SPACE CENTER, Fla. -- Spewing flames and smoke, Space Shuttle Endeavour hurtles into the twilight sky on mission STS-108. The second attempt in two days, liftoff occurred at 5:19:28 p.m. EST (10:19.28 GMT). Endeavour will dock with the International Space Station on Dec. 7. STS-108 is the final Shuttle mission of 2001and the 107th Shuttle flight overall. It is the 12th flight to the Space Station. Landing of the orbiter at KSC's Shuttle Landing Facility is targeted for 1:05 p.m. EST (6:05 p.m. GMT) Dec. 16.

  7. Evaluation of the class II region of the major histocompatibility complex of the greyhound with the genomic matching technique and sequence-based typing.

    PubMed

    Fliegner, R A; Holloway, S A; Lester, S; McLure, C A; Dawkins, R L

    2008-08-01

    The class II region of the major histocompatibility complex was evaluated in 25 greyhounds by sequence-based typing and the genomic matching technique (GMT). Two new DLA-DRB1 alleles were identified. Twenty-four dogs carried the DLA-DRB1*01201/DQA1*00401/DQB1*01303/DQB1*01701 haplotype, which carries two DQB1 alleles. One haplotype was identified from which DQB1 and DQA1 appeared to be deleted. The GMT enabled detection of DQB1 copy number, discrimination of the different class II haplotypes and the identification of new, possibly biologically relevant polymorphisms.

  8. Glycolysis-induced discordance between glucose metabolic rates measured with radiolabeled fluorodeoxyglucose and glucose

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ackermann, R.F.; Lear, J.L.

    We have developed an autoradiographic method for estimating the oxidative and glycolytic components of local CMRglc (LCMRglc), using sequentially administered ({sup 18}F)fluorodeoxyglucose (FDG) and ({sup 14}C)-6-glucose (GLC). FDG-6-phosphate accumulation is proportional to the rate of glucose phosphorylation, which occurs before the divergence of glycolytic (GMg) and oxidative (GMo) glucose metabolism and is therefore related to total cerebral glucose metabolism GMt: GMg + GMo = GMt. With oxidative metabolism, the {sup 14}C label of GLC is temporarily retained in Krebs cycle-related substrate pools. We hypothesize that with glycolytic metabolism, however, a significant fraction of the {sup 14}C label is lost frommore » the brain via lactate production and efflux from the brain. Thus, cerebral GLC metabolite concentration may be more closely related to GMo than to GMt. If true, the glycolytic metabolic rate will be related to the difference between FDG- and GLC-derived LCMRglc. Thus far, we have studied normal awake rats, rats with limbic activation induced by kainic acid (KA), and rats visually stimulated with 16-Hz flashes. In KA-treated rats, significant discordance between FDG and GLC accumulation, which we attribute to glycolysis, occurred only in activated limbic structures. In visually stimulated rats, significant discordance occurred only in the optic tectum.« less

  9. Immune interference in the setting of same-day administration of two similar inactivated alphavirus vaccines: eastern equine and western equine encephalitis.

    PubMed

    Reisler, Ronald B; Gibbs, Paul H; Danner, Denise K; Boudreau, Ellen F

    2012-11-26

    We compared the effect on primary vaccination plaque-reduction neutralization 80% titers (PRNT80) responses of same-day administration (at different injection sites) of two similar investigational inactivated alphavirus vaccines, eastern equine encephalitis (EEE) vaccine (TSI-GSD 104) and western equine encephalitis (WEE) vaccine (TSI-GSD 210) to separate administration. Overall, primary response rate for EEE vaccine was 524/796 (66%) and overall primary response rate for WEE vaccine was 291/695 (42%). EEE vaccine same-day administration yielded a 59% response rate and a responder geometric mean titer (GMT)=89 while separate administration yielded a response rate of 69% and a responder GMT=119. WEE vaccine same-day administration yielded a 30% response rate and a responder GMT=53 while separate administration yielded a response rate of 54% and a responder GMT=79. EEE response rates for same-day administration (group A) vs. non-same-day administration (group B) were significantly affected by gender. A logistic regression model predicting response to EEE comparing group B to group A for females yielded an OR=4.10 (95% CL 1.97-8.55; p=.0002) and for males yielded an OR=1.25 (95% CL 0.76-2.07; p=.3768). WEE response rates for same-day administration vs. non-same-day administration were independent of gender. A logistic regression model predicting response to WEE comparing group B to group A yielded an OR=2.14 (95% CL 1.22-3.73; p=.0077). We report immune interference occurring with same-day administration of two completely separate formalin inactivated viral vaccines in humans. These findings combined with the findings of others regarding immune interference would argue for a renewed emphasis on studying the immunological mechanisms of induction of inactivated viral vaccine protection. Copyright © 2012. Published by Elsevier Ltd.

  10. Measles epidemics and seroepidemiology of population in Wujin, Changzhou city, Jiangsu province, China 2015.

    PubMed

    Tang, Lingyan; Zhou, Yihong; Pan, Yingzi; Zhu, Hongming

    2017-05-19

    The measles epidemic was rather severe in Wujin 2015, and a seroprevalence survey of measles antibody was conducted during June to September 2015 in Wjin district of Changzhou city. Blood samples were collected from community health population and convenient samples of residual blood from hospitals. Measles-specific IgG levels were measured by ELISA assay. A total of 122 measles cases were reported 2015 in Wujin district with an incidence of 8.31 per 100000 populations. A large proportion of measles cases were adults ≥20years (62.30%) and infants aged <18months (28.69%). Floating population accounted for 68.57% of all cases. 1070 blood samples aged from 9months to 49years old were collected and the overall seroprevalence and geometric mean titer (GMT) of measles were 82.71% and 551.19mIU/ml, respectively. Although the seroprevalence among children aged 9months to 4years was consistently over 90%, it began to decrease since 24months, and till the age of ≥10years, the seroprevalences were all <80%, however, the seroprevalence rised to above 80% in people over 40years. There were no significant differences between the two blood sample sources in the level of seroprevalence and GMT. Also no significant differences were observed in the seroprevalence of measles and GMT levels between genders. The seroprevalence and GMT in people with measles vaccination were higher than those without measles vaccination or people whose measles vaccination are unknown (P<0.001). Our study indicated that the adult measles cases have become a serious problem in Wujin district, which may mainly relate to the increasing size of the floating population with low measles vaccine coverage. The seroprevalence of measles decreased dramatically with increasing age since teenagers, which may mainly caused by waning vaccine-induced immunity. Therefore, it is necessary to strengthen measles vaccine in these people especially floating population. Copyright © 2017 Elsevier Ltd. All rights reserved.

  11. Quantifying the bystander-effect of 2.5G mobile telephones on the speech perception of digital hearing aid users.

    PubMed

    Vlastarakos, P V; Nikolopoulos, T P; Manolopoulos, L; Stamou, A; Halkiotis, K K; Ferekidis, E; Georgiou, E

    2012-01-01

    To quantify the bystander-effect of 2.5G mobile telephones (2.5G-MTs) on the speech perception of digital hearing-aid (dHA) users. Differences in the susceptibility of behind-the-ear (BTE) compared to in-to-the-ear (ITE) dHAs were also assessed. Prospective-comparative study conducted at a tertiary referral centre (ENT Department) and a HA-fitting laboratory. Key-word recognition scores from open-sentence lists were calculated. Power-analysis determined that a minimum of 60 subjects with SNHL (30 in each group), using either BTE or ITE dHAs, were required for reliable study outcomes. Sixty-four adults were tested with a functioning 2.5G-MT at almost physical contact with their ear; thirty subjects used BTE and 34 ITE dHAs. Aided word recognition score differences between studied groups and within each group, while a 2.5G-MT was activated. Cut-off inclusion criterion regarding baseline aided word recognition score was 75%. Baseline aided word recognition scores for ITE dHAs were better compared to BTE ones (p < 0.01). Following the 2.5G-MT activation, this difference disappeared. No statistically significant difference in word recognition was observed between the examined groups, or within the BTE group, from the bystander-effect of the 2.5G-MT. ITE dHAs proved more susceptible to electromagnetic interference (p < 0.05). The bystander-effect of 2.5G-MTs on the speech perception of dHA users is either minimal, or not significant. The observed compatibility has a positive impact on the lives of millions of people worldwide. The long-standing theory of more interference in BTE compared to ITE HAs is not confirmed by the results of the present study. EBM level of evidence: 2c.

  12. "Triplet" polycistronic vectors encoding Gata4, Mef2c, and Tbx5 enhances postinfarct ventricular functional improvement compared with singlet vectors.

    PubMed

    Mathison, Megumi; Singh, Vivek P; Gersch, Robert P; Ramirez, Maricela O; Cooney, Austin; Kaminsky, Stephen M; Chiuchiolo, Maria J; Nasser, Ahmed; Yang, Jianchang; Crystal, Ronald G; Rosengart, Todd K

    2014-10-01

    The in situ reprogramming of cardiac fibroblasts into induced cardiomyocytes by the administration of gene transfer vectors encoding Gata4 (G), Mef2c (M), and Tbx5 (T) has been shown to improve ventricular function in myocardial infarction models. The efficacy of this strategy could, however, be limited by the need for fibroblast targets to be infected 3 times--once by each of the 3 transgene vectors. We hypothesized that a polycistronic "triplet" vector encoding all 3 transgenes would enhance postinfarct ventricular function compared with use of "singlet" vectors. After validation of the polycistronic vector expression in vitro, adult male Fischer 344 rats (n=6) underwent coronary ligation with or without intramyocardial administration of an adenovirus encoding all 3 major vascular endothelial growth factor (VEGF) isoforms (AdVEGF-All6A positive), followed 3 weeks later by the administration to AdVEGF-All6A-positive treated rats of singlet lentivirus encoding G, M, or T (1×10(5) transducing units each) or the same total dose of a GMT "triplet" lentivirus vector. Western blots demonstrated that triplet and singlet vectors yielded equivalent GMT transgene expression, and fluorescence activated cell sorting demonstrated that triplet vectors were nearly twice as potent as singlet vectors in generating induced cardiomyocytes from cardiac fibroblasts. Echocardiography demonstrated that GMT triplet vectors were more effective than the 3 combined singlet vectors in enhancing ventricular function from postinfarct baselines (triplet, 37%±10%; singlet, 13%±7%; negative control, 9%±5%; P<.05). These data have confirmed that the in situ administration of G, M, and T induces postinfarct ventricular functional improvement and that GMT polycistronic vectors enhance the efficacy of this strategy. Copyright © 2014 The American Association for Thoracic Surgery. Published by Elsevier Inc. All rights reserved.

  13. Immunogenicity and safety of the inactivated Japanese encephalitis vaccine IXIARO® in elderly subjects: Open-label, uncontrolled, multi-center, phase 4 study.

    PubMed

    Cramer, Jakob P; Dubischar, Katrin; Eder, Susanne; Burchard, Gerd D; Jelinek, Tomas; Jilma, Bernd; Kollaritsch, Herwig; Reisinger, Emil; Westritschnig, Kerstin

    2016-08-31

    IXIARO® is a Vero cell-derived, inactivated Japanese encephalitis (JE) vaccine licensed mainly in western countries for children and adults traveling to JE endemic areas. Limited immunogenicity and safety data in elderly travelers have been available. To evaluate safety and immunogenicity of IXIARO in elderly subjects. Open-label, single arm, multi-centered study. Two-hundred subjects with good general health, including adequately controlled chronic conditions, received two doses of IXIARO®, 28days apart. Protective levels of antibodies were tested 42days after the second dose. Systemic and local adverse events (AEs) were solicited for 7days after each dose, unsolicited AEs were collected up to day 70 and in a phone call at month 7. Subjects were aged 64-83years (median 69.0years). Nineteen percent of subjects had serious or medically attended AEs up to Day 70 (primary endpoint), none of them causally linked to IXIARO. Solicited local AEs were reported by 33.5% (most common: local tenderness) and solicited systemic AEs by 27% (most common: headache) of subjects. The seroprotection rate was 65% with a geometric mean titre (GMT) of 37. Subjects with tick borne encephalitis (TBE) vaccinations in the past 5years (N=29) had a SCR of 90% and GMT of 65. IXIARO is generally well tolerated in the elderly, and the safety profile is largely comparable with younger adults. SCR and GMT are lower compared to younger adults, but SCR is in the range reported in elderly for other vaccines e.g. against TBE, hepatitis-A virus (HAV)/hepatitis-B virus (HBV), influenza. The differences in SCR and GMT from younger to elderly adults were in the range of other vaccines. Duration of protection is uncertain in older persons, therefore a booster dose (third dose) should be considered before any further exposure to JE virus. Copyright © 2016. Published by Elsevier Ltd.

  14. Immunogenicity and safety of zoster vaccine live administered with quadrivalent influenza virus vaccine.

    PubMed

    Levin, Myron J; Buchwald, Ulrike K; Gardner, Julie; Martin, Jason; Stek, Jon E; Brown, Elizabeth; Popmihajlov, Zoran

    2018-01-02

    Randomized, blinded, placebo-controlled trial to evaluate the safety and immunogenicity of ZOSTAVAX™ (ZV) administered concomitantly with quadrivalent inactivated influenza vaccine (IIV4) in adults≥50years of age (NCT02519855). Overall, 440 participants were randomized into the Concomitant Group (CG) and 442 into the Sequential Group (SG). The CG received ZV and IIV4 at separate injection sites on Day 1 and matching placebo at Week 4. The SG received placebo and IIV4 (2015-2016 influenza season) at separate injection sites on Day 1 and ZV at Week 4. Varicella-zoster virus (VZV) antibody geometric mean titer (GMT) and geometric mean fold-rise (GMFR) from baseline to 4weeks postvaccination, measured by glycoprotein enzyme-linked immunosorbent assay (gpELISA) and adjusted for age and prevaccination titer. Influenza strain-specific GMT at baseline and 4weeks postvaccination was measured by hemagglutination inhibition (HAI) assay. Injection-site and systemic adverse experiences (AEs) within 28days following any vaccination and serious AEs throughout the study. The adjusted VZV antibody GMT ratio (CG/SG) was 0.87 (95%CI: 0.80, 0.95), meeting the prespecified noninferiority criterion. The VZV antibody GMFR in the CG was 1.9 (95%CI: 1.76, 2.05), meeting the acceptability criterion. Influenza antibody GMT ratios for A/H1N1, A/H3N2, B/Yamagata and B/Victoria were 1.02 (95%CI: 0.88, 1.18), 1.10 (95%CI: 0.94, 1.29), 1.00 (95%CI: 0.88, 1.14), and 0.99 (95%CI: 0.87, 1.13), respectively. The frequency of vaccine-related injection-site and systemic AEs was comparable between groups. No vaccine-related serious AE was observed. The concomitant administration of ZV and IIV4 to adults≥50years of age induced VZV-specific and influenza-specific antibody responses that were comparable to those following administration of either vaccine alone, and was generally well tolerated. Copyright © 2017 Elsevier Ltd. All rights reserved.

  15. A Concept for Seeing-Limited Near-IR Spectroscopy on the Giant Magellan Telescope

    NASA Astrophysics Data System (ADS)

    Simcoe, Robert A.; Furesz, Gabor; Egan, Mark; Malonis, Andrew; Hellickson, Tim

    2016-09-01

    We present a simple seeing-limited IR spectrometer design for the Giant Magellan Telescope, with continuous R = 6000 coverage from 0.87-2.50 microns for a 0:7" slit. The instrument's design is based on an asymmetric white pupil echelle layout, with dichroics splitting the optical train into yJ, H, and K channels after the pupil transfer mirror. A separate low-dispersion mode offers single-object R ~ 850 spectra which also cover the full NIR bandpass in each exposure. Catalog gratings and H2RG detectors are used to minimize cost, and only two cryogenic rotary mechanisms are employed, reducing mechanical complexity. The instrument dewar occupies an envelope of 1:8×1:5×1:2 meters, satisfying mass and volume requirements for GMT with comfortable margin. We estimate the system throughput at ~35% including losses from the atmosphere, telescope, and instrument (i.e. all coatings, gratings, and sensors). This optical efficiency is comparable to the FIRE spectrograph on Magellan, and we have specified and designed fast cameras so the GMT instrument will have an almost identical pixel scale as FIRE. On the 6.5 meter Magellan telescopes, FIRE is read-noise limited in the y and J bands, similar to other existing near-IR spectrometers and also to JWST/NIRSPEC. GMT's twelve-fold increase in collecting area will therefore offer gains in signal-to-noise per exposure that exceed those of moderate resolution optical instruments, which are already sky-noise limited on today's telescopes. Such an instrument would allow GMT to pursue key early science programs on the Epoch of Reionization, galaxy formation, transient astronomy, and obscured star formation environments prior to commissioning of its adaptive optics system. This design study demonstrates the feasibility of developing relatively affordable spectrometers at the ELT scale, in response to the pressures of joint funding for these telescopes and their associated instrument suites.

  16. Earth Reflectivity from Deep Space Climate Observatory (DSCOVR) Earth Polychromatic Camera (EPIC)

    NASA Astrophysics Data System (ADS)

    Song, W.; Knyazikhin, Y.; Wen, G.; Marshak, A.; Yan, G.; Mu, X.; Park, T.; Chen, C.; Xu, B.; Myneni, R. B.

    2017-12-01

    Earth reflectivity, which is also specified as Earth albedo or Earth reflectance, is defined as the fraction of incident solar radiation reflected back to space at the top of the atmosphere. It is a key climate parameter that describes climate forcing and associated response of the climate system. Satellite is one of the most efficient ways to measure earth reflectivity. Conventional polar orbit and geostationary satellites observe the Earth at a specific local solar time or monitor only a specific area of the Earth. For the first time, the NASA's Earth Polychromatic Imaging Camera (EPIC) onboard NOAA's Deep Space Climate Observatory (DSCOVR) collects simultaneously radiance data of the entire sunlit earth at 8 km resolution at nadir every 65 to 110 min. It provides reflectivity images in backscattering direction with the scattering angle between 168º and 176º at 10 narrow spectral bands in ultraviolet, visible, and near-Infrared (NIR) wavelengths. We estimate the Earth reflectivity using DSCOVR EPIC observations and analyze errors in Earth reflectivity due to sampling strategy of polar orbit Terra/Aqua MODIS and geostationary Goddard Earth Observing System-R series missions. We also provide estimates of contributions from ocean, clouds, land and vegetation to the Earth reflectivity. Graphic abstract shows enhanced RGB EPIC images of the Earth taken on July-24-2016 at 7:04GMT and 15:48 GMT. Parallel lines depict a 2330 km wide Aqua MODIS swath. The plot shows diurnal courses of mean Earth reflectance over the Aqua swath (triangles) and the entire image (circles). In this example the relative difference between the mean reflectances is +34% at 7:04GMT and -16% at 15:48 GMT. Corresponding daily averages are 0.256 (0.044) and 0.231 (0.025). The relative precision estimated as root mean square relative error is 17.9% in this example.

  17. MiR-590 Promotes Transdifferentiation of Porcine and Human Fibroblasts Toward a Cardiomyocyte-Like Fate by Directly Repressing Specificity Protein 1.

    PubMed

    Singh, Vivek P; Mathison, Megumi; Patel, Vivekkumar; Sanagasetti, Deepthi; Gibson, Brian W; Yang, Jianchang; Rosengart, Todd K

    2016-11-10

    Reprogramming of cardiac fibroblasts into induced cardiomyocyte-like cells represents a promising potential new therapy for treating heart disease, inducing significant improvements in postinfarct ventricular function in rodent models. Because reprogramming factors effective in transdifferentiating rodent cells are not sufficient to reprogram human cells, we sought to identify reprogramming factors potentially applicable to human studies. Lentivirus vectors expressing Gata4, Mef2c, and Tbx5 (GMT); Hand2 (H), Myocardin (My), or microRNA (miR)-590 were administered to rat, porcine, and human cardiac fibroblasts in vitro. induced cardiomyocyte-like cell production was then evaluated by assessing expression of the cardiomyocyte marker, cardiac troponin T (cTnT), whereas signaling pathway studies were performed to identify reprogramming factor targets. GMT administration induced cTnT expression in ≈6% of rat fibroblasts, but failed to induce cTnT expression in porcine or human cardiac fibroblasts. Addition of H/My and/or miR-590 to GMT administration resulted in cTNT expression in ≈5% of porcine and human fibroblasts and also upregulated the expression of the cardiac genes, MYH6 and TNNT2. When cocultured with murine cardiomyocytes, cTnT-expressing porcine cardiac fibroblasts exhibited spontaneous contractions. Administration of GMT plus either H/My or miR-590 alone also downregulated fibroblast genes COL1A1 and COL3A1. miR-590 was shown to directly suppress the zinc finger protein, specificity protein 1 (Sp1), which was able to substitute for miR-590 in inducing cellular reprogramming. These data support porcine studies as a surrogate for testing human cardiac reprogramming, and suggest that miR-590-mediated repression of Sp1 represents an alternative pathway for enhancing human cardiac cellular reprogramming. © 2016 The Authors. Published on behalf of the American Heart Association, Inc., by Wiley Blackwell.

  18. The effect of infliximab and timing of vaccination on the humoral response to influenza vaccination in patients with rheumatoid arthritis and ankylosing spondylitis.

    PubMed

    Elkayam, Ori; Bashkin, Amir; Mandelboim, Michal; Litinsky, Irena; Comaheshter, Doron; Levartovsky, David; Mendelson, Ella; Wigler, Irena; Caspi, Dan; Paran, Daphna

    2010-06-01

    To assess the effect of the timing of vaccination in relation to administration of infliximab on the efficacy and safety of influenza vaccine in patients with rheumatoid arthritis (RA) and ankylosing spondylitis (AS). The study population comprised 38 patients treated with infliximab at a mean dosage of 3 mg/kg (20 RA patients; 18 AS patients; 23 RA controls (treated with disease modifying antirheumatic drugs other than anti-tumor necrosis factor-alpha; and 17 healthy controls). Split-virion inactivated vaccine containing 15 mug hemagglutinin/dose of each of A/New Caledionan/20/1999 (H1N1), A/Wisconsin/67/2005 (H3N2), and B/Malaysia/2506/2004 (M) was used. Patients treated with infliximab were divided into 2 groups: 22 were vaccinated on the day of administration of infliximab, while 16 received the vaccine 3 weeks after infliximab. Baseline and 4- to 6-week clinical assessment of disease activity included erythrocyte sedimentation rate and C-reactive protein for all patients, the 28-joint disease-activity score for RA patients, and Bath Ankylosing Spondylitis Disease Activity Index for AS patients. Hemagglutination inhibition (HI) antibodies were tested by a standard World Health Organization procedure. Response was defined as >or=4-fold rise in HI antibodies 4 to 6 weeks after vaccination, or seroconversion in patients with a nonprotective baseline level of antibodies (<1/40). Geometric mean titers (GMT) were calculated to assess the immunity of the whole group. At baseline, RA patients and controls had similar occurrence of protective levels of HI antibodies and GMT, while AS patients had lower levels reflecting lower rates of previous vaccination. Four weeks after vaccination, a significant and similar increase in GMT for each antigen was observed in all groups (P < 0.004) except in the RA-infliximab group, vaccinated 3 weeks after administration of infliximab, in whom the increase in GMT was not significant for H1N1 (P = 0.12) and H3 (P = 0.06). AS patients demonstrated an increase in GMT, independently of the time of vaccination. The percentage of responders was similar in all groups. The response was not affected by variables such as age, gender, methotrexate, or prednisone use. Parameters of disease activity remained unchanged. No adverse effects other than injection site pain were recorded. Influenza virus vaccine generated a good humoral response in RA and AS patients treated with infliximab. Copyright 2010 Elsevier Inc. All rights reserved.

  19. Global Multi-Resolution Topography (GMRT) Synthesis - Recent Updates and Developments

    NASA Astrophysics Data System (ADS)

    Ferrini, V. L.; Morton, J. J.; Celnick, M.; McLain, K.; Nitsche, F. O.; Carbotte, S. M.; O'hara, S. H.

    2017-12-01

    The Global Multi-Resolution Topography (GMRT, http://gmrt.marine-geo.org) synthesis is a multi-resolution compilation of elevation data that is maintained in Mercator, South Polar, and North Polar Projections. GMRT consists of four independently curated elevation components: (1) quality controlled multibeam data ( 100m res.), (2) contributed high-resolution gridded bathymetric data (0.5-200 m res.), (3) ocean basemap data ( 500 m res.), and (4) variable resolution land elevation data (to 10-30 m res. in places). Each component is managed and updated as new content becomes available, with two scheduled releases each year. The ocean basemap content for GMRT includes the International Bathymetric Chart of the Arctic Ocean (IBCAO), the International Bathymetric Chart of the Southern Ocean (IBCSO), and the GEBCO 2014. Most curatorial effort for GMRT is focused on the swath bathymetry component, with an emphasis on data from the US Academic Research Fleet. As of July 2017, GMRT includes data processed and curated by the GMRT Team from 974 research cruises, covering over 29 million square kilometers ( 8%) of the seafloor at 100m resolution. The curated swath bathymetry data from GMRT is routinely contributed to international data synthesis efforts including GEBCO and IBCSO. Additional curatorial effort is associated with gridded data contributions from the international community and ensures that these data are well blended in the synthesis. Significant new additions to the gridded data component this year include the recently released data from the search for MH370 (Geoscience Australia) as well as a large high-resolution grid from the Gulf of Mexico derived from 3D seismic data (US Bureau of Ocean Energy Management). Recent developments in functionality include the deployment of a new Polar GMRT MapTool which enables users to export custom grids and map images in polar projection for their selected area of interest at the resolution of their choosing. Available for both the south and north polar regions, grids can be exported from GMRT in a variety of formats including ASCII, GeoTIFF and NetCDF to support use in common mapping software applications such as ArcGIS, GMT, Matlab, and Python. New web services have also been developed to enable programmatic access to grids and images in north and south polar projections.

  20. Toward high-efficiency and detailed Monte Carlo simulation study of the granular flow spallation target

    NASA Astrophysics Data System (ADS)

    Cai, Han-Jie; Zhang, Zhi-Lei; Fu, Fen; Li, Jian-Yang; Zhang, Xun-Chao; Zhang, Ya-Ling; Yan, Xue-Song; Lin, Ping; Xv, Jian-Ya; Yang, Lei

    2018-02-01

    The dense granular flow spallation target is a new target concept chosen for the Accelerator-Driven Subcritical (ADS) project in China. For the R&D of this kind of target concept, a dedicated Monte Carlo (MC) program named GMT was developed to perform the simulation study of the beam-target interaction. Owing to the complexities of the target geometry, the computational cost of the MC simulation of particle tracks is highly expensive. Thus, improvement of computational efficiency will be essential for the detailed MC simulation studies of the dense granular target. Here we present the special design of the GMT program and its high efficiency performance. In addition, the speedup potential of the GPU-accelerated spallation models is discussed.

  1. STS-108 Endeavour Launch from Pad 39-B

    NASA Technical Reports Server (NTRS)

    2001-01-01

    STS-108 Endeavour Launch from Pad 39-B KSC-01PD-1788 KENNEDY SPACE CENTER, Fla. -- A pool of water near Launch Pad 39B turns crimson from the reflection of flames at the launch of Space Shuttle Endeavour on mission STS-109. The second attempt in two days, liftoff occurred at 5:19:28 p.m. EST (10:19.28 GMT). Endeavour will dock with the International Space Station on Dec. 7. STS-108 is the final Shuttle mission of 2001and the 107th Shuttle flight overall. It is the 12th flight to the Space Station. Landing of the orbiter at KSC's Shuttle Landing Facility is targeted for 1:05 p.m. EST (6:05 p.m. GMT) Dec. 16.

  2. Tree Cover Mapping Tool—Documentation and user manual

    USGS Publications Warehouse

    Cotillon, Suzanne E.; Mathis, Melissa L.

    2016-06-02

    The Tree Cover Mapping (TCM) tool was developed by scientists at the U.S. Geological Survey Earth Resources Observation and Science Center to allow a user to quickly map tree cover density over large areas using visual interpretation of high resolution imagery within a geographic information system interface. The TCM tool uses a systematic sample grid to produce maps of tree cover. The TCM tool allows the user to define sampling parameters to estimate tree cover within each sample unit. This mapping method generated the first on-farm tree cover maps of vast regions of Niger and Burkina Faso. The approach contributes to implementing integrated landscape management to scale up re-greening and restore degraded land in the drylands of Africa. The TCM tool is easy to operate, practical, and can be adapted to many other applications such as crop mapping, settlements mapping, or other features. This user manual provides step-by-step instructions for installing and using the tool, and creating tree cover maps. Familiarity with ArcMap tools and concepts is helpful for using the tool.

  3. Some Programs Should Not Run on Laptops - Providing Programmatic Access to Applications Via Web Services

    NASA Astrophysics Data System (ADS)

    Gupta, V.; Gupta, N.; Gupta, S.; Field, E.; Maechling, P.

    2003-12-01

    Modern laptop computers, and personal computers, can provide capabilities that are, in many ways, comparable to workstations or departmental servers. However, this doesn't mean we should run all computations on our local computers. We have identified several situations in which it preferable to implement our seismological application programs in a distributed, server-based, computing model. In this model, application programs on the user's laptop, or local computer, invoke programs that run on an organizational server, and the results are returned to the invoking system. Situations in which a server-based architecture may be preferred include: (a) a program is written in a language, or written for an operating environment, that is unsupported on the local computer, (b) software libraries or utilities required to execute a program are not available on the users computer, (c) a computational program is physically too large, or computationally too expensive, to run on a users computer, (d) a user community wants to enforce a consistent method of performing a computation by standardizing on a single implementation of a program, and (e) the computational program may require current information, that is not available to all client computers. Until recently, distributed, server-based, computational capabilities were implemented using client/server architectures. In these architectures, client programs were often written in the same language, and they executed in the same computing environment, as the servers. Recently, a new distributed computational model, called Web Services, has been developed. Web Services are based on Internet standards such as XML, SOAP, WDSL, and UDDI. Web Services offer the promise of platform, and language, independent distributed computing. To investigate this new computational model, and to provide useful services to the SCEC Community, we have implemented several computational and utility programs using a Web Service architecture. We have hosted these Web Services as a part of the SCEC Community Modeling Environment (SCEC/CME) ITR Project (http://www.scec.org/cme). We have implemented Web Services for several of the reasons sited previously. For example, we implemented a FORTRAN-based Earthquake Rupture Forecast (ERF) as a Web Service for use by client computers that don't support a FORTRAN runtime environment. We implemented a Generic Mapping Tool (GMT) Web Service for use by systems that don't have local access to GMT. We implemented a Hazard Map Calculator Web Service to execute Hazard calculations that are too computationally intensive to run on a local system. We implemented a Coordinate Conversion Web Service to enforce a standard and consistent method for converting between UTM and Lat/Lon. Our experience developing these services indicates both strengths and weakness in current Web Service technology. Client programs that utilize Web Services typically need network access, a significant disadvantage at times. Programs with simple input and output parameters were the easiest to implement as Web Services, while programs with complex parameter-types required a significant amount of additional development. We also noted that Web services are very data-oriented, and adapting object-oriented software into the Web Service model proved problematic. Also, the Web Service approach of converting data types into XML format for network transmission has significant inefficiencies for some data sets.

  4. Factors Associated with Post-Seasonal Serological Titer and Risk Factors for Infection with the Pandemic A/H1N1 Virus in the French General Population

    PubMed Central

    Lapidus, Nathanael; de Lamballerie, Xavier; Salez, Nicolas; Setbon, Michel; Delabre, Rosemary M.; Ferrari, Pascal; Moyen, Nanikaly; Gougeon, Marie-Lise; Vely, Frédéric; Leruez-Ville, Marianne; Andreoletti, Laurent; Cauchemez, Simon; Boëlle, Pierre-Yves; Vivier, Éric; Abel, Laurent; Schwarzinger, Michaël; Legeas, Michèle; Le Cann, Pierre; Flahault, Antoine; Carrat, Fabrice

    2013-01-01

    The CoPanFlu-France cohort of households was set up in 2009 to study the risk factors for infection by the pandemic influenza virus (H1N1pdm) in the French general population. The authors developed an integrative data-driven approach to identify individual, collective and environmental factors associated with the post-seasonal serological H1N1pdm geometric mean titer, and derived a nested case-control analysis to identify risk factors for infection during the first season. This analysis included 1377 subjects (601 households). The GMT for the general population was 47.1 (95% confidence interval (CI): 45.1, 49.2). According to a multivariable analysis, pandemic vaccination, seasonal vaccination in 2009, recent history of influenza-like illness, asthma, chronic obstructive pulmonary disease, social contacts at school and use of public transports by the local population were associated with a higher GMT, whereas history of smoking was associated with a lower GMT. Additionally, young age at inclusion and risk perception of exposure to the virus at work were identified as possible risk factors, whereas presence of an air humidifier in the living room was a possible protective factor. These findings will be interpreted in light of the longitudinal analyses of this ongoing cohort. PMID:23613718

  5. Historical Earthquake Scenarios and Effects on the Ancient City of İstanbul (A.D. 478 - 1999)

    NASA Astrophysics Data System (ADS)

    Şahin, Murat; Elitez, İrem; Özmen, Aybars; Yaltırak, Cenk

    2016-04-01

    Active fault mapping is one of the most important subject in the active tectonic studies. The consistency of the active fault maps with the reality is curial for the settlements and socio-economic conditions. The Marmara region is one of the precious area where the longest duration settlement and civilization are observed along a fault system. The Marmara Sea and its surrounding area are unique on the earth which has the remarkable history of 1500 years in non-instrumental period. Because, İstanbul was the capital city of both Byzantium and Ottoman Empire and the historical records of İstanbul are reliable for this environment such as A.D. 1509 earthquake known as 'little apocalypse'. Although the active faults of the Marmara Sea have studied and mapped by many researchers, there are only three different main fault model suggested for the Marmara Sea. These are single fault model (Le Pichon et al., 2001), pull-apart model (Armijo et al., 2005) and horsetail model (Yaltırak, 2002; 2015). Yaltırak (2015) grouped the 38 destructive historical earthquakes according to their felt area for these three fault models in the Marmara region. In this study we have modelled the Modified Mercalli Intensities (MMI) of historical buildings and cross checked with damages on the related structure in order to investigate the consistency of fault pattern with historical earthquakes. In this study three-stage evaluation has been made. In the first stage, three models that differ from each other were prepared on a database in commercial ArcGIS software. Mw values were calculated for each segment according to their lengths, seismogenic depths and 18 mm/yr accumulation by using the equation of Kanamori (1977). In the second stage, the 1:25000-scale geological map of the ancient city of İstanbul was revised according to Vs30 data of the İstanbul Metropolitan Municipality. The exact location of the historical constructions in the İstanbul have been plotted by using non-commercial high-resolution satellite images and archaeological maps. The third stage is the calculation of g-acceleration by using attenuation relation of Boore et al. (1993 and 1997). In order to calculate the MMI values for this study, we used the PGA-MMI equation of Bilal and Askan (2010). The MMI data sets produced in ArcGIS 10.2 utilized to generate the images by using the Generic Mapping Tool (GMT). In conclusion, one of the fault patterns (Le Pichon et al., 2001) has major contradictions with historical earthquake records and the other (Armijo et al., 2005) has incompatibilities with records as much as the first one. The remarkable correlation between the active faults and the damages of historical earthquakes on the constructions in ancient city of İstanbul is observed in the third model (Yaltırak, 2002; 2015).

  6. Discordance gradient-surface dans le rétrécissement mitral: le gradient moyen transmitral est-il un critère de sévérité ou un indice de tolérance du rétrécissement mitral serré?

    PubMed Central

    Najih, Hayat; Arous, Salim; Laarje, Aziza; Baghdadi, Dalila; Benouna, Mohamed Ghali; Azzouzi, Leila; Habbal, Rachida

    2016-01-01

    Le rétrécissement mitral (RM) rhumatismal demeure une valvulopathie fréquente dans les pays en voie de développement. Cependant, les pays industrialisés ont vu l'émergence ces dernières années de nouvelles étiologies de RM; notamment l'origine médicamenteuse et/ou toxique responsable de valvulopathies restrictives aussi bien sténosantes que régurgitantes. Pour cette raison, l'évaluation échocardiographique du RM et surtout, la définition de critères objectifs pour conclure au caractère serré du RM reste toujours d'actualité. Les objectifs du travail sont: évaluer l'existence ou non d'une corrélation directe entre le gradient moyen transmitral (GMT) et la sévérité du RM chez les patients porteurs d'un RM serré ou très serré (critère primaire) et analyser les différents paramètres qui conditionnent le gradient moyen transmitral (GMT) (Critère secondaire). Il s'agit d'une étude transversale monocentrique incluant tous les patients admis au service de Cardiologie du CHU Ibn Rochd de Casablanca pour un RM serré ou très serré, sur une période d'une année (Janvier 2014 à Décembre 2014). Nous avons analysés séparément deux groupes de patients : ceux avec un gradient moyen transmitral<10 mmHg (groupe 1) et ceux avec un gradient>10mmHg (groupe2). 50 patients porteurs d'un RM serré ou très serré ont été inclus. L'âge moyen de nos patients est de 41,7 ans avec prédominance féminine (sex ratio: 0,25). 64% de nos patients avaient un RM serré et 36% avaient un RM très serré. 52% (26 patients) avaient un GMT <10mmHg et 48% (24 patients) avaient un gradient moyen >10mmHg, ce qui suggère l'absence de corrélation directe entre la sévérité du RM et le GMT (coefficient de Pearson R: -0,137). Pour la dyspnée, 80% des patients du groupe 1 étaient dyspnéiques stade II de la NYHA et 70% des patients du groupe 2 étaient dyspnéiques stade III (41%) ou IV (29%) de la NYHA, ce qui signifie l'existence d'une corrélation significative entre le GMT et la sévérité de la dyspnée (R: 0,586 et p: 0,001). L'étude analytique de la fréquence cardiaque et la présence d'une décompensation cardiaque par rapport au gradient moyen transmitral a montré une corrélation significative. En effet, parmi les patients du groupe 1, 96% avaient une FC entre 60 et 100 bpm et aucun patient n'était en décompensation cardiaque. Dans le groupe 2,54% (13 patients) avaient une FC >100 bpm et 7 parmi eux (53%) étaient en décompensation cardiaque gauche. L'étude de la pression artérielle pulmonaire systolique dans les deux groupes de l'étude a révélé l'existence dans notre série d'une corrélation statistiquement significative (R : 0,518 et P : 0,001) entre la PAPS et le GMT. La régularité du rythme et la fonction ventriculaire droite n'étaient pas corrélées au GMT (R : 0,038 et R :-0,002 respectivement). Le gradient moyen transmitral est un bon indicateur de la tolérance du rétrécissement mitral, mais il reflète imparfaitement sa sévérité vue qu'il dépend de plusieurs paramètres hémodynamiques. D'authentiques rétrécissements mitraux très serrés peuvent exister avec des gradients moyens transmitraux <10 mm Hg, c'est pour cette raison que la valeur du GMT ne doit jamais être interprétée isolément. PMID:28292038

  7. Anti-aliasing filters for deriving high-accuracy DEMs from TLS data: A case study from Freeport, Texas

    NASA Astrophysics Data System (ADS)

    Xiong, L.; Wang, G.; Wessel, P.

    2017-12-01

    Terrestrial laser scanning (TLS), also known as ground-based Light Detection and Ranging (LiDAR), has been frequently applied to build bare-earth digital elevation models (DEMs) for high-accuracy geomorphology studies. The point clouds acquired from TLS often achieve a spatial resolution at fingerprint (e.g., 3cm×3cm) to handprint (e.g., 10cm×10cm) level. A downsampling process has to be applied to decimate the massive point clouds and obtain portable DEMs. It is well known that downsampling can result in aliasing that causes different signal components to become indistinguishable when the signal is reconstructed from the datasets with a lower sampling rate. Conventional DEMs are mainly the results of upsampling of sparse elevation measurements from land surveying, satellite remote sensing, and aerial photography. As a consequence, the effects of aliasing have not been fully investigated in the open literature of DEMs. This study aims to investigate the spatial aliasing problem and implement an anti-aliasing procedure of regridding dense TLS data. The TLS data collected in the beach and dune area near Freeport, Texas in the summer of 2015 are used for this study. The core idea of the anti-aliasing procedure is to apply a low-pass spatial filter prior to conducting downsampling. This article describes the successful use of a fourth-order Butterworth low-pass spatial filter employed in the Generic Mapping Tools (GMT) software package as anti-aliasing filters. The filter can be applied as an isotropic filter with a single cutoff wavelength or as an anisotropic filter with different cutoff wavelengths in the X and Y directions. The cutoff wavelength for the isotropic filter is recommended to be three times the grid size of the target DEM.

  8. Anti-aliasing filters for deriving high-accuracy DEMs from TLS data: A case study from Freeport, Texas

    NASA Astrophysics Data System (ADS)

    Xiong, Lin.; Wang, Guoquan; Wessel, Paul

    2017-03-01

    Terrestrial laser scanning (TLS), also known as ground-based Light Detection and Ranging (LiDAR), has been frequently applied to build bare-earth digital elevation models (DEMs) for high-accuracy geomorphology studies. The point clouds acquired from TLS often achieve a spatial resolution at fingerprint (e.g., 3 cm×3 cm) to handprint (e.g., 10 cm×10 cm) level. A downsampling process has to be applied to decimate the massive point clouds and obtain manageable DEMs. It is well known that downsampling can result in aliasing that causes different signal components to become indistinguishable when the signal is reconstructed from the datasets with a lower sampling rate. Conventional DEMs are mainly the results of upsampling of sparse elevation measurements from land surveying, satellite remote sensing, and aerial photography. As a consequence, the effects of aliasing caused by downsampling have not been fully investigated in the open literature of DEMs. This study aims to investigate the spatial aliasing problem of regridding dense TLS data. The TLS data collected from the beach and dune area near Freeport, Texas in the summer of 2015 are used for this study. The core idea of the anti-aliasing procedure is to apply a low-pass spatial filter prior to conducting downsampling. This article describes the successful use of a fourth-order Butterworth low-pass spatial filter employed in the Generic Mapping Tools (GMT) software package as an anti-aliasing filter. The filter can be applied as an isotropic filter with a single cutoff wavelength or as an anisotropic filter with two different cutoff wavelengths in the X and Y directions. The cutoff wavelength for the isotropic filter is recommended to be three times the grid size of the target DEM.

  9. KSC01pd1820

    NASA Image and Video Library

    2001-12-07

    VANDENBERG AIR FORCE BASE, Calif. -- A Delta II rocket launches successfully with the joint NASA/French Space Agency oceanography satellite Jason 1 and Thermosphere Ionosphere Mesosphere Energetics and Dynamics satellite aboard. Liftoff from Launch Complex 2W occurred at 7:07 a.m. PST (10:07 a.m. EST or 15:07 GMT). Jason 1 joins the orbiting Topex/Poseidon satellite to continue observations of the global climate interaction occurring between the sea and the atmosphere as a result of stored solar energy. Instruments on Jason 1 will map variations in ocean surface topography to monitor world ocean circulation, study interactions of the oceans and atmosphere, improve climate predictions and observe events like El Nino. The mission is expected to last three years. The TIMED satellite will study a little-known region above the atmosphere, some 40 to 110 miles from the Earth's surface. Studying this region has been nearly impossible until now because conventional airplanes and balloons cannot reach this high altitude, and it is too low for direct satellite measurements

  10. KSC01pd1822

    NASA Image and Video Library

    2001-12-07

    VANDENBERG AIR FORCE BASE, Calif.. -- A Delta rocket leaps off Launch Complex 2W carrying the joint NASA/French Space Agency oceanography satellite Jason 1 and Thermosphere Ionosphere Mesosphere Energetics and Dynamics satellite aboard. Liftoff occurred at 7:07 a.m. PST (10:07 a.m. EST or 15:07 GMT). Jason 1 joins the orbiting Topex/Poseidon satellite to continue observations of the global climate interaction occurring between the sea and the atmosphere as a result of stored solar energy. Instruments on Jason 1 will map variations in ocean surface topography to monitor world ocean circulation, study interactions of the oceans and atmosphere, improve climate predictions and observe events like El Nino. The mission is expected to last three years. The TIMED satellite will study a little-known region above the atmosphere, some 40 to 110 miles from the Earth's surface. Studying this region has been nearly impossible until now because conventional airplanes and balloons cannot reach this high altitude, and it is too low for direct satellite measurements

  11. The analysis and kinetic energy balance of an upper-level wind maximum during intense convection

    NASA Technical Reports Server (NTRS)

    Fuelberg, H. E.; Jedlovec, G. J.

    1982-01-01

    The purpose of this paper is to analyze the formation and maintenance of the upper-level wind maximum which formed between 1800 and 2100 GMT, April 10, 1979, during the AVE-SESAME I period, when intense storms and tornadoes were experienced (the Red River Valley tornado outbreak). Radiosonde stations participating in AVE-SESAME I are plotted (centered on Oklahoma). National Meteorological Center radar summaries near the times of maximum convective activity are mapped, and height and isotach plots are given, where the formation of an upper-level wind maximum over Oklahoma is the most significant feature at 300 mb. The energy balance of the storm region is seen to change dramatically as the wind maximum forms. During much of its lifetime, the upper-level wind maximum is maintained by ageostrophic flow that produces cross-contour generation of kinetic energy and by the upward transport of midtropospheric energy. Two possible mechanisms for the ageostrophic flow are considered.

  12. Vaccine-Induced Anti-HBs Level in 5-6 Year-Old Malnourished Children

    PubMed Central

    Karimi, Mehran; Raee, Ali; Baghianimoghadam, Behnam; Fallahzadeh, Mohammad Hossein

    2013-01-01

    Background Malnutrition is the most common cause of immune deficiency. It results in reduced secretion of T-cells and B-cell-stimulating factors leading to declining of special immunoglobulins. On the other hand, hepatitis B, as a major world health problem, can be prevented effectively by vaccination. Three doses of hepatitis B virus (HBV) vaccine induce protective levels of anti-hepatitis B surface (anti-HBs) in 95% of healthy children. This level decreases gradually over time. Objectives The goal of this study was to assess anti-HBs in malnourished children, who confronted to some degrees of immune deficiency. Patients and Methods This is a cross-sectional study conducted during May to August 2010 in therapeutic clinics of Yazd, Iran. Samples were selected simply and consecutively among 5-6 year-old children with a history of three doses of HBV vaccine in infancy. On the basis of World Health Organization’s definition on malnutrition, which considers anthropometric measurements, malnourished children entered the study. Totally 83 cases (37 boys and 46 girls) were gathered and classified into three groups of mild, moderate, and severe malnutrition. One milliliter of venous blood was taken and anti-HBs were tested by enzyme linked immunosorbant assay (ELISA). Results Overall, seroprotection rate and geometric mean titer (GMT) of anti-HBs were 60.2% and 15.47 ± 10.92 mIU/mL, respectively. Seroprotection rate was 71.4%, 55.2%, and 72.7% in mild, moderate, and severe malnourished children, respectively. GMT was 30.78 mIU/mL, 12.15 mIU/mL, and 22.95 mIU/mL in these groups, respectively. None of these two indices were significant in these groups (P = 0.471, P = 0.364). Seroprotection rate and GMT were 54.1% and 13.26 ± 11.59 mIU/mL in boys, and 65.2% and 17.5 ± 10.59 mIU/mL in girls, respectively, showing no significant relationship with gender (P = 0.302, P = 0.602). Lowest seroprotection rate was in stunted cases (47.1%) and highest in wasted children (77.8%). This difference also was not significant (P = 0.43). Conclusions The seroprotection rate and GMT of anti-HBs observed in this study do not show a high level of immunity. These two indices were not related to severity of malnutrition. We conclude that severity of malnutrition does not affect vaccine-induced antibody level and seroprotection rate; however small sample size in each group of study hinders decisive conclusion. Moreover, GMT and seroprotection rate showed no relationship with type of abnormal anthropometric index, including weight for height, weight for age, and height for age. PMID:23658590

  13. Vaccine-Induced Anti-HBs Level in 5-6 Year-Old Malnourished Children.

    PubMed

    Karimi, Mehran; Raee, Ali; Baghianimoghadam, Behnam; Fallahzadeh, Mohammad Hossein

    2013-02-01

    Malnutrition is the most common cause of immune deficiency. It results in reduced secretion of T-cells and B-cell-stimulating factors leading to declining of special immunoglobulins. On the other hand, hepatitis B, as a major world health problem, can be prevented effectively by vaccination. Three doses of hepatitis B virus (HBV) vaccine induce protective levels of anti-hepatitis B surface (anti-HBs) in 95% of healthy children. This level decreases gradually over time. The goal of this study was to assess anti-HBs in malnourished children, who confronted to some degrees of immune deficiency. This is a cross-sectional study conducted during May to August 2010 in therapeutic clinics of Yazd, Iran. Samples were selected simply and consecutively among 5-6 year-old children with a history of three doses of HBV vaccine in infancy. On the basis of World Health Organization's definition on malnutrition, which considers anthropometric measurements, malnourished children entered the study. Totally 83 cases (37 boys and 46 girls) were gathered and classified into three groups of mild, moderate, and severe malnutrition. One milliliter of venous blood was taken and anti-HBs were tested by enzyme linked immunosorbant assay (ELISA). Overall, seroprotection rate and geometric mean titer (GMT) of anti-HBs were 60.2% and 15.47 ± 10.92 mIU/mL, respectively. Seroprotection rate was 71.4%, 55.2%, and 72.7% in mild, moderate, and severe malnourished children, respectively. GMT was 30.78 mIU/mL, 12.15 mIU/mL, and 22.95 mIU/mL in these groups, respectively. None of these two indices were significant in these groups (P = 0.471, P = 0.364). Seroprotection rate and GMT were 54.1% and 13.26 ± 11.59 mIU/mL in boys, and 65.2% and 17.5 ± 10.59 mIU/mL in girls, respectively, showing no significant relationship with gender (P = 0.302, P = 0.602). Lowest seroprotection rate was in stunted cases (47.1%) and highest in wasted children (77.8%). This difference also was not significant (P = 0.43). The seroprotection rate and GMT of anti-HBs observed in this study do not show a high level of immunity. These two indices were not related to severity of malnutrition. We conclude that severity of malnutrition does not affect vaccine-induced antibody level and seroprotection rate; however small sample size in each group of study hinders decisive conclusion. Moreover, GMT and seroprotection rate showed no relationship with type of abnormal anthropometric index, including weight for height, weight for age, and height for age.

  14. Randomized comparative study of the serum antihemagglutinin and antineuraminidase antibody responses to six licensed trivalent influenza vaccines.

    PubMed

    Couch, Robert B; Atmar, Robert L; Keitel, Wendy A; Quarles, John M; Wells, Janet; Arden, Nancy; Niño, Diane

    2012-12-17

    Serum antibody to the hemagglutinin (HA) surface protein of influenza virus induced by influenza vaccination is a correlate of protection against influenza. The neuraminidase (NA) protein is also on the surface of the virus; antibody to it has been shown to impair virus release from infected cells and to reduce the intensity of influenza infections in animal models and in humans challenged with infectious virus. Recently we have shown that NA inhibiting antibody can independently contribute to immunity to naturally-occurring influenza immunity in the presence of antibody to the HA. The present study was conducted to evaluate induction of antibody to the NA and the HA by commercially available influenza vaccines. Healthy young adults were vaccinated with one of five commercially available trivalent inactivated vaccines or live influenza vaccine. Frequencies of serum antibody and fold geometric mean titer (GMT) increases four weeks later were measured to each of the three vaccine viruses (A/H1N1, A/H3N2, B) in hemagglutination-inhibition (HAI) and neutralization (neut) assays. Frequency and fold GMT increase in neuraminidase-inhibition (NI) antibody titers were measured to the influenza A viruses (A/H1N1, A/H3N2). No significant reactogenicity occurred among the vaccinated subjects. The Fluvirin inactivated vaccine induced more anti-HA antibody responses and a higher fold GMT increase than the other inactivated vaccines but there were no major differences in response frequencies or fold GMT increase among the inactivated vaccines. Both the frequency of antibody increase and fold GMT increase were significantly lower for live vaccine than for any inactivated vaccine in HAI and neut assays for all three vaccine viruses. Afluria inactivated vaccine induced more N1 antibody and Fluarix induced more N2 antibody than the other vaccines but all inactivated vaccines induced serum NI antibody. The live vaccine failed to elicit any NI responses for the N2 NA of A/H3N2 virus and frequencies were low for the N1 of A/H1N1 virus. Trivalent inactivated influenza vaccines with similar HA dosage induce similar serum anti-HA antibody responses in healthy adults. Current inactivated vaccines all induce serum anti-NA antibody to the N1 and N2 NA proteins but some are better than others for N1 or N2. The live vaccine, Flumist, was a poor inducer of either anti-HA or anti-NA serum antibody compared to inactivated vaccine in the healthy adults. In view of the capacity for contributing to immunity to influenza in humans, developing guidelines for NA content and induction of NA antibody is desirable. Copyright © 2012 Elsevier Ltd. All rights reserved.

  15. 75 FR 80470 - Pacific Fishery Management Council; Public Meeting

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-12-22

    ... Pacific Fishery Management Council's (Council) Groundfish Management Team (GMT) will hold a working... session is to review team roles and responsibilities, conduct workload planning for 2011, review the...

  16. User Guide for the Anvil Threat Cooridor Forecast Tool V2.4 for AWIPS

    NASA Technical Reports Server (NTRS)

    Barett, Joe H., III; Bauman, William H., III

    2008-01-01

    The Anvil Tool GUI allows users to select a Data Type, toggle the map refresh on/off, place labels, and choose the Profiler Type (source of the KSC 50 MHz profiler data), the Date- Time of the data, the Center of Plot, and the Station (location of the RAOB or 50 MHz profiler). If the Data Type is Models, the user selects a Fcst Hour (forecast hour) instead of Station. There are menus for User Profiles, Circle Label Options, and Frame Label Options. Labels can be placed near the center circle of the plot and/or at a specified distance and direction from the center of the circle (Center of Plot). The default selection for the map refresh is "ON". When the user creates a new Anvil Tool map with Refresh Map "ON, the plot is automatically displayed in the AWIPS frame. If another Anvil Tool map is already displayed and the user does not change the existing map number shown at the bottom of the GUI, the new Anvil Tool map will overwrite the old one. If the user turns the Refresh Map "OFF", the new Anvil Tool map is created but not automatically displayed. The user can still display the Anvil Tool map through the Maps dropdown menu* as shown in Figure 4.

  17. Making Space for Place: Mapping Tools and Practices to Teach for Spatial Justice

    ERIC Educational Resources Information Center

    Rubel, Laurie H.; Hall-Wieckert, Maren; Lim, Vivian Y.

    2017-01-01

    This article presents a set of spatial tools for classroom learning about spatial justice. As part of a larger team, we designed a curriculum that engaged 10 learners with 3 spatial tools: (a) an oversized floor map, (b) interactive geographic information systems (GIS) maps, and (c) participatory mapping. We analyze how these tools supported…

  18. Serological Response of Patients with Influenza A (H1N1) pdm09-Associated Pneumonia: An Observational Study

    PubMed Central

    Angkasekwinai, Nasikarn; Kaewnapha, Bualan; Waywa, Duangdao; Werarak, Peerawong; Tongsai, Sasima; Chokephaibulkit, Kulkanya; Thamlikitkul, Visanu; Siritantikorn, Sontana

    2013-01-01

    Background Little is known about the dynamics or magnitude of antibody response in patients with influenza A (H1N1) pdm09-associated pneumonia. We described and compared the antibody response to influenza A (H1N1) pdm09 in patients with and without pneumonia. Methods We collected serum samples and determined antibody titers by the hemagglutination inhibition (HI) and microneutralization (mNT) assays from patients with RT-PCR confirmed influenza A (H1N1) pdm09 virus at baseline, 1, 2 and 6 months after onset of illness. Results Fifty-nine patients were enrolled, 45 (76.3%) were between 15 and 60 years of age, 49 (83.1%) were hospitalized and 25 (42.4%) had complications with pneumonia. Ninety-four percent of patients had HI titers ≥ 1: 40 and 90% had mNT titers ≥ 1: 160 at 2 months after illness. Geometric mean titers (GMT) of HI and mNT increased significantly (p<0.001) between baseline and months 1 or 2, then declined significantly (p<0.001) at month 6 by the HI assay, but dropped to an insignificant level (p=0.24) by the mNT assay. The mNT-GMT was at least twice as high as corresponding HI antibodies over a 6 month period. The GMT of HI and mNT in those with pneumonia (1 mo) peaked earlier than that of those without pneumonia (2 mo). When adjusted by age and gender, those with pneumonia had a higher HI-GMT than those without pneumonia at 1 month (264 vs. 117, p=0.007), 2 months (212 vs. 159, p=0.013), and 6 months (160 vs. 82, p=0.018). Conclusions The patients recovered from influenza A (H1N1) pdm09-associated pneumonia, clearly developed an earlier and more robust antibody response until 6 months after onset of illness. The results in our study are useful to determine an appropriate donor and timing to obtain convalescent plasma for adjunctive treatment of seriously ill patients with pandemic H1N1 influenza. PMID:24312299

  19. Impact of vaccination on infection with Vietnam H5N1 high pathogenicity avian influenza virus in hens and the eggs they lay.

    PubMed

    Bertran, Kateri; Moresco, Kira; Swayne, David E

    2015-03-10

    High pathogenicity avian influenza virus (HPAIV) infections in chickens negatively impact egg production and cause egg contamination. Previously, vaccination maintained egg production and reduced egg contamination when challenged with a North American H5N2 HPAIV. However, Asian H5N1 HPAIV infection has some characteristics of increased pathogenicity compared to other H5 HPAIV such as more rapid drop and complete cessation in egg production. Sham (vaccinated at 25 and 28 weeks of age), inactivated H5N1 Once (1X-H5-Vax; vaccinated at 28 weeks of age only) and inactivated H5N1 Twice (2X-H5-Vax; vaccinated at 25 and 28 weeks of age) vaccinated adult White Leghorn hens were challenged intranasally at 31 weeks of age with 6.1 log10 mean embryo infectious doses (EID50) of clade 2.3.2.1a H5N1 HPAIV (A/chicken/Vietnam/NCVD-675/2011) which was homologous to the inactivated vaccine. Sham-vaccinated layers experienced 100% mortality within 3 days post-challenge; laid soft and thin-shelled eggs; had recovery of virus from oral swabs and in 53% of the eggs from eggshell surface (35%), yolk (24%), and albumin (41%); and had very high titers of virus (average 7.91 log10 EID50/g) in all segments of the oviduct and ovary. By comparison, 1X- and 2X-H5-Vax challenged hens survived infection, laid similar number of eggs pre- and post-challenge, all eggs had normal egg shell quality, and had significantly fewer contaminated eggs with reduced virus quantity. The 2X-H5-Vax hens had significantly higher HI titers by the day of challenge (304 GMT) and at termination (512 GMT) than 1X-H5-Vax hens (45 GMT and 128 GMT). The current study demonstrated that AIV infections caused by clade 2.3.2.1a H5N1 variants can be effectively controlled by either double or single homologous vaccination. Published by Elsevier Ltd.

  20. Social Media's Initial Reaction to Information and Misinformation on Ebola, August 2014: Facts and Rumors.

    PubMed

    Fung, Isaac Chun-Hai; Fu, King-Wa; Chan, Chung-Hong; Chan, Benedict Shing Bun; Cheung, Chi-Ngai; Abraham, Thomas; Tse, Zion Tsz Ho

    2016-01-01

    We analyzed misinformation about Ebola circulating on Twitter and Sina Weibo, the leading Chinese microblog platform, at the outset of the global response to the 2014-2015 Ebola epidemic to help public health agencies develop their social media communication strategies. We retrieved Twitter and Sina Weibo data created within 24 hours of the World Health Organization announcement of a Public Health Emergency of International Concern (Batch 1 from August 8, 2014, 06:50:00 Greenwich Mean Time [GMT] to August 9, 2014, 06:49:59 GMT) and seven days later (Batch 2 from August 15, 2014, 06:50:00 GMT to August 16, 2014, 06:49:59 GMT). We obtained and analyzed a 1% random sample of tweets containing the keyword Ebola. We retrieved all Sina Weibo posts with Chinese keywords for Ebola for analysis. We analyzed changes in frequencies of keywords, hashtags, and Web links using relative risk (RR) and c(2) feature selection algorithm. We identified misinformation by manual coding and categorizing randomly selected sub-datasets. We identified two speculative treatments (i.e., bathing in or drinking saltwater and ingestion of Nano Silver, an experimental drug) in our analysis of changes in frequencies of keywords and hashtags. Saltwater was speculated to be protective against Ebola in Batch 1 tweets but their mentions decreased in Batch 2 (RR=0.11 for "salt" and RR=0.14 for "water"). Nano Silver mentions were higher in Batch 2 than in Batch 1 (RR=10.5). In our manually coded samples, Ebola-related misinformation constituted about 2% of Twitter and Sina Weibo content. A range of 36%-58% of the posts were news about the Ebola outbreak and 19%-24% of the posts were health information and responses to misinformation in both batches. In Batch 2, 43% of Chinese microblogs focused on the Chinese government sending medical assistance to Guinea. Misinformation about Ebola was circulated at a very low level globally in social media in either batch. Qualitative and quantitative analyses of social media posts can provide relevant information to public health agencies during emergency responses.

  1. Concept Mapping Using Cmap Tools to Enhance Meaningful Learning

    NASA Astrophysics Data System (ADS)

    Cañas, Alberto J.; Novak, Joseph D.

    Concept maps are graphical tools that have been used in all facets of education and training for organizing and representing knowledge. When learners build concept maps, meaningful learning is facilitated. Computer-based concept mapping software such as CmapTools have further extended the use of concept mapping and greatly enhanced the potential of the tool, facilitating the implementation of a concept map-centered learning environment. In this chapter, we briefly present concept mapping and its theoretical foundation, and illustrate how it can lead to an improved learning environment when it is combined with CmapTools and the Internet. We present the nationwide “Proyecto Conéctate al Conocimiento” in Panama as an example of how concept mapping, together with technology, can be adopted by hundreds of schools as a means to enhance meaningful learning.

  2. 47 CFR 73.701 - Definitions.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... equivalent to mean solar time at the prime meridian (0° longitude), formerly expressed in GMT. (RR) (f... for 50 percent of the days of the reference month. (r) Carrier power. The average power supplied to...

  3. 47 CFR 73.701 - Definitions.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... equivalent to mean solar time at the prime meridian (0° longitude), formerly expressed in GMT. (RR) (f... for 50 percent of the days of the reference month. (r) Carrier power. The average power supplied to...

  4. 47 CFR 73.701 - Definitions.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... equivalent to mean solar time at the prime meridian (0° longitude), formerly expressed in GMT. (RR) (f... for 50 percent of the days of the reference month. (r) Carrier power. The average power supplied to...

  5. 47 CFR 73.701 - Definitions.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... equivalent to mean solar time at the prime meridian (0° longitude), formerly expressed in GMT. (RR) (f... for 50 percent of the days of the reference month. (r) Carrier power. The average power supplied to...

  6. 47 CFR 73.701 - Definitions.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... equivalent to mean solar time at the prime meridian (0° longitude), formerly expressed in GMT. (RR) (f... for 50 percent of the days of the reference month. (r) Carrier power. The average power supplied to...

  7. Strategy for the IRAS all-sky survey

    NASA Technical Reports Server (NTRS)

    Lundy, S. A.

    1984-01-01

    IRAS (the Infrared Astronomical Satellite) was launched on January 25, 1983 (January 26 GMT) with the primary purpose of performing an infrared survey of the entire celestial sphere. To ensure completeness and reliability, every point of sky was to be covered by a minimum of four separate scans of the telescope field-of-view, and as much as possible with six, with certain added timing constraints on the elapsed interval between scans. These strong requirements for sky coverage, combined with a restricted, rotating viewing-window, made extensive planning for the survey strategy, both pre-launch and during operations, a necessity. The result was that on November 21 (November 22 GMT), when the liquid helium required for cooling was depleted, 96 percent of the sky was covered to the minimum depth of four and 71 percent was coverd to depth six or more.

  8. Ageostrophic winds in the severe strom environment

    NASA Technical Reports Server (NTRS)

    Moore, J. T.

    1982-01-01

    The period from 1200 GMT 10 April to 0000 GMT 11 April 1979, during which time several major tornadoes and severe thunderstorms, including the Wichita Falls tornado occurred was studied. A time adjusted, isentropic data set was used to analyze key parameters. Fourth order centered finite differences were used to compute the isallobaric, inertial advective, tendency, inertial advective geostrophic and ageostrophic winds. Explicit isentropic trajectories were computed through the isentropic, inviscid equations of motion using a 15 minute time step. Ageostrophic, geostrophic and total vertical motion fields were computed to judge the relative importance of ageostrophy in enhancing the vertical motion field. It is found that ageostrophy is symptomatic of those mass adjustments which take place during upper level jet streak propagation and can, in a favorable environment, act to increase and release potential instability over meso alpha time periods.

  9. Sun, Moon and Earthquakes

    NASA Astrophysics Data System (ADS)

    Kolvankar, V. G.

    2013-12-01

    During a study conducted to find the effect of Earth tides on the occurrence of earthquakes, for small areas [typically 1000km X1000km] of high-seismicity regions, it was noticed that the Sun's position in terms of universal time [GMT] shows links to the sum of EMD [longitude of earthquake location - longitude of Moon's foot print on earth] and SEM [Sun-Earth-Moon angle]. This paper provides the details of this relationship after studying earthquake data for over forty high-seismicity regions of the world. It was found that over 98% of the earthquakes for these different regions, examined for the period 1973-2008, show a direct relationship between the Sun's position [GMT] and [EMD+SEM]. As the time changes from 00-24 hours, the factor [EMD+SEM] changes through 360 degree, and plotting these two variables for earthquakes from different small regions reveals a simple 45 degree straight-line relationship between them. This relationship was tested for all earthquakes and earthquake sequences for magnitude 2.0 and above. This study conclusively proves how Sun and the Moon govern all earthquakes. Fig. 12 [A+B]. The left-hand figure provides a 24-hour plot for forty consecutive days including the main event (00:58:23 on 26.12.2004, Lat.+3.30, Long+95.980, Mb 9.0, EQ count 376). The right-hand figure provides an earthquake plot for (EMD+SEM) vs GMT timings for the same data. All the 376 events including the main event faithfully follow the straight-line curve.

  10. Impact of malaria and helminth infections on immunogenicity of the human papillomavirus-16/18 AS04-adjuvanted vaccine in Tanzania.

    PubMed

    Brown, Joelle; Baisley, Kathy; Kavishe, Bazil; Changalucha, John; Andreasen, Aura; Mayaud, Philippe; Gumodoka, Balthazar; Kapiga, Saidi; Hayes, Richard; Watson-Jones, Deborah

    2014-01-23

    Endemic malaria and helminth infections in sub-Saharan Africa can act as immunological modulators and impact responses to standard immunizations. We conducted a cohort study to measure the influence of malaria and helminth infections on the immunogenicity of the bivalent HPV-16/18 vaccine. We evaluated the association between malaria and helminth infections, and HPV-16/18 antibody responses among 298 Tanzanian females aged 10-25 years enrolled in a randomized controlled trial of the HPV-16/18 vaccine. Malaria parasitaemia was diagnosed by examination of blood smears, and helminth infections were diagnosed by examination of urine and stool samples, respectively. Geometric mean antibody titres (GMT) against HPV-16/18 antibodies were measured by enzyme-linked immunosorbent assay. Parasitic infections were common; one-third (30.4%) of participants had a helminth infection and 10.2% had malaria parasitaemia. Overall, the vaccine induced high HPV-16/18 GMTs, and there was no evidence of a reduction in HPV-16 or HPV-18 GMT at Month 7 or Month 12 follow-up visits among participants with helminths or malaria. There was some evidence that participants with malaria had increased GMTs compared to those without malaria. The data show high HPV immunogenicity regardless of the presence of malaria and helminth infections. The mechanism and significance for the increase in GMT in those with malaria is unknown. Copyright © 2013 The Authors. Published by Elsevier Ltd.. All rights reserved.

  11. Peptide-enhanced mRNA transfection in cultured mouse cardiac fibroblasts and direct reprogramming towards cardiomyocyte-like cells

    PubMed Central

    Lee, Kunwoo; Yu, Pengzhi; Lingampalli, Nithya; Kim, Hyun Jin; Tang, Richard; Murthy, Niren

    2015-01-01

    The treatment of myocardial infarction is a major challenge in medicine due to the inability of heart tissue to regenerate. Direct reprogramming of endogenous cardiac fibroblasts into functional cardiomyocytes via the delivery of transcription factor mRNAs has the potential to regenerate cardiac tissue and to treat heart failure. Even though mRNA delivery to cardiac fibroblasts has the therapeutic potential, mRNA transfection in cardiac fibroblasts has been challenging. Herein, we develop an efficient mRNA transfection in cultured mouse cardiac fibroblasts via a polyarginine-fused heart-targeting peptide and lipofectamine complex, termed C-Lipo and demonstrate the partial direct reprogramming of cardiac fibroblasts towards cardiomyocyte cells. C-Lipo enabled the mRNA-induced direct cardiac reprogramming due to its efficient transfection with low toxicity, which allowed for multiple transfections of Gata4, Mef2c, and Tbx5 (GMT) mRNAs for a period of 2 weeks. The induced cardiomyocyte-like cells had α-MHC promoter-driven GFP expression and striated cardiac muscle structure from α-actinin immunohistochemistry. GMT mRNA transfection of cultured mouse cardiac fibroblasts via C-Lipo significantly increased expression of the cardiomyocyte marker genes, Actc1, Actn2, Gja1, Hand2, and Tnnt2, after 2 weeks of transfection. Moreover, this study provides the first direct evidence that the stoichiometry of the GMT reprogramming factors influence the expression of cardiomyocyte marker genes. Our results demonstrate that mRNA delivery is a potential approach for cardiomyocyte generation. PMID:25834424

  12. A randomized controlled trial on errorless learning in goal management training: study rationale and protocol

    PubMed Central

    2013-01-01

    Background Many brain-injured patients referred for outpatient rehabilitation have executive deficits, notably difficulties with planning, problem-solving and goal directed behaviour. Goal Management Training (GMT) has proven to be an efficacious cognitive treatment for these problems. GMT entails learning and applying an algorithm, in which daily tasks are subdivided into multiple steps. Main aim of the present study is to examine whether using an errorless learning approach (preventing the occurrence of errors during the acquisition phase of learning) contributes to the efficacy of Goal Management Training in the performance of complex daily tasks. Methods/Design The study is a double blind randomized controlled trial, in which the efficacy of Goal Management Training with an errorless learning approach will be compared with conventional Goal Management Training, based on trial and error learning. In both conditions 32 patients with acquired brain injury of mixed etiology will be examined. Main outcome measure will be the performance on two individually chosen everyday-tasks before and after treatment, using a standardized observation scale and goal attainment scaling. Discussion This is the first study that introduces errorless learning in Goal Management Training. It is expected that the GMT-errorless learning approach will improve the execution of complex daily tasks in brain-injured patients with executive deficits. The study can contribute to a better treatment of executive deficits in cognitive rehabilitation. Trial registration (Dutch Trial Register): http://NTR3567 PMID:23786651

  13. Sonic Booms on Big Structures (SonicBOBS) Phase I Database; NASA Dryden Sensors

    NASA Technical Reports Server (NTRS)

    Haering, Edward A., Jr.; Arnac, Sarah Renee

    2010-01-01

    This DVD contains 13 channels of microphone and up to 22 channels of pressure transducer data collected in September, 2009 around several buildings located at Edwards Air Force Base. These data were recorded by NASA Dryden. Not included are data taken by NASA Langley and Gulfstream. Each day's data is in a separate folder and each pass is in a file beginning with "SonicBOBS_" (for microphone data) or "SonicBOBSBB_" (for BADS and BASS data) followed by the month, day, year as two digits each, followed by the hour, minute, sec after midnight GMT. The filename time given is for the END time of the raw recording file. In the case of the microphone data, this time may be several minutes after the sonic boom, and is according to the PC's uncalibrated clock. The Matlab data files have the actual time as provided by a GPS-based IRIG-B signal recorded concurrently with the data. Microphone data is given for 5 seconds prior to 20 seconds after the sonic boom. BADS and BASS data is given for the full recording, 6 seconds for the BADS and 10 seconds for the BASS. As an example of the naming convention, file "SonicBOBS_091209154618.mat" is from September 12, 2009 at 15:46:18 GMT. Note that data taken on September 12, 2009 prior to 01:00:00 GMT was of the Space Shuttle Discovery (a sonic boom of opportunity), which was on September 11, 2009 in local Pacific Daylight Time.

  14. Map reading tools for map libraries.

    USGS Publications Warehouse

    Greenberg, G.L.

    1982-01-01

    Engineers, navigators and military strategists employ a broad array of mechanical devices to facilitate map use. A larger number of map users such as educators, students, tourists, journalists, historians, politicians, economists and librarians are unaware of the available variety of tools which can be used with maps to increase the speed and efficiency of their application and interpretation. This paper identifies map reading tools such as coordinate readers, protractors, dividers, planimeters, and symbol-templets according to a functional classification. Particularly, arrays of tools are suggested for use in determining position, direction, distance, area and form (perimeter-shape-pattern-relief). -from Author

  15. Accurate estimation of short read mapping quality for next-generation genome sequencing

    PubMed Central

    Ruffalo, Matthew; Koyutürk, Mehmet; Ray, Soumya; LaFramboise, Thomas

    2012-01-01

    Motivation: Several software tools specialize in the alignment of short next-generation sequencing reads to a reference sequence. Some of these tools report a mapping quality score for each alignment—in principle, this quality score tells researchers the likelihood that the alignment is correct. However, the reported mapping quality often correlates weakly with actual accuracy and the qualities of many mappings are underestimated, encouraging the researchers to discard correct mappings. Further, these low-quality mappings tend to correlate with variations in the genome (both single nucleotide and structural), and such mappings are important in accurately identifying genomic variants. Approach: We develop a machine learning tool, LoQuM (LOgistic regression tool for calibrating the Quality of short read mappings, to assign reliable mapping quality scores to mappings of Illumina reads returned by any alignment tool. LoQuM uses statistics on the read (base quality scores reported by the sequencer) and the alignment (number of matches, mismatches and deletions, mapping quality score returned by the alignment tool, if available, and number of mappings) as features for classification and uses simulated reads to learn a logistic regression model that relates these features to actual mapping quality. Results: We test the predictions of LoQuM on an independent dataset generated by the ART short read simulation software and observe that LoQuM can ‘resurrect’ many mappings that are assigned zero quality scores by the alignment tools and are therefore likely to be discarded by researchers. We also observe that the recalibration of mapping quality scores greatly enhances the precision of called single nucleotide polymorphisms. Availability: LoQuM is available as open source at http://compbio.case.edu/loqum/. Contact: matthew.ruffalo@case.edu. PMID:22962451

  16. A proposed-standard format to represent and distribute tomographic models and other earth spatial data

    NASA Astrophysics Data System (ADS)

    Postpischl, L.; Morelli, A.; Danecek, P.

    2009-04-01

    Formats used to represent (and distribute) tomographic earth models differ considerably and are rarely self-consistent. In fact, each earth scientist, or research group, uses specific conventions to encode the various parameterizations used to describe, e.g., seismic wave speed or density in three dimensions, and complete information is often found in related documents or publications (if available at all) only. As a consequence, use of various tomographic models from different authors requires considerable effort, is more cumbersome than it should be and prevents widespread exchange and circulation within the community. We propose a format, based on modern web standards, able to represent different (grid-based) model parameterizations within the same simple text-based environment, easy to write, to parse, and to visualise. The aim is the creation of self-describing data-structures, both human and machine readable, that are automatically recognised by general-purpose software agents, and easily imported in the scientific programming environment. We think that the adoption of such a representation as a standard for the exchange and distribution of earth models can greatly ease their usage and enhance their circulation, both among fellow seismologists and among a broader non-specialist community. The proposed solution uses semantic web technologies, fully fitting the current trends in data accessibility. It is based on Json (JavaScript Object Notation), a plain-text, human-readable lightweight computer data interchange format, which adopts a hierarchical name-value model for representing simple data structures and associative arrays (called objects). Our implementation allows integration of large datasets with metadata (authors, affiliations, bibliographic references, units of measure etc.) into a single resource. It is equally suited to represent other geo-referenced volumetric quantities — beyond tomographic models — as well as (structured and unstructured) computational meshes. This approach can exploit the capabilities of the web browser as a computing platform: a series of in-page quick tools for comparative analysis between models will be presented, as well as visualisation techniques for tomographic layers in Google Maps and Google Earth. We are working on tools for conversion into common scientific format like netCDF, to allow easy visualisation in GEON-IDV or gmt.

  17. Friction Mapping as a Tool for Measuring the Elastohydrodynamic Contact Running-in Process

    DTIC Science & Technology

    2015-10-01

    ARL-TR-7501 ● OCT 2015 US Army Research Laboratory Friction Mapping as a Tool for Measuring the Elastohydrodynamic Contact...Research Laboratory Friction Mapping as a Tool for Measuring the Elastohydrodynamic Contact Running-in Process by Stephen Berkebile Vehicle...YYYY) October 2015 2. REPORT TYPE Final 3. DATES COVERED (From - To) 1 January–30 June 2015 4. TITLE AND SUBTITLE Friction Mapping as a Tool for

  18. Solar Geometry

    Atmospheric Science Data Center

    2014-09-25

    Solar Noon (GMT time) The time when the sun is due south in the northern hemisphere or due north in the southern ... The average cosine of the angle between the sun and directly overhead during daylight hours.   Cosine solar ...

  19. NAM Forecast Soundings

    Science.gov Websites

    finished at Mon Jan 29 17:50:41 GMT 2007 Disclaimer Please note that these products are experimental and in J/kg TOTL - Total Totals Index This product is experimental and is for evaluation only. The

  20. Magrit: a new thematic cartography tool

    NASA Astrophysics Data System (ADS)

    Viry, Matthieu; Giraud, Timothée; Lambert, Nicolas

    2018-05-01

    The article provides an overview of the features of the Magrit web application: a free online thematic mapping tool, presenting a strong pedagogical dimension and making possible to mobilize all the elements necessary for the realization of a thematic map. In this tool, several simple modes of representation are proposed such as proportional maps or choropleth maps. Other, more complex modes are also available such as smoothed maps and cartograms. Each map can be finalized thanks to layout and customization features (projection, scale, orientation, toponyms, etc.) and exported in vector format. Magrit is therefore a complete, light and versatile tool particularly adapted to cartography teaching at the university.

  1. Brown enters transfer tunnel

    NASA Image and Video Library

    1998-11-01

    STS095-E-5160 (1 Nov. 1998) --- Astronaut Curtis L. Brown Jr., STS-95 commander, floats through airlock hatchway during Flight Day three activity. The photo was taken with an electronic still camera (ESC) at 01:39:20 GMT, Nov. 1.

  2. SASS wind forecast impact studies using the GLAS and NEPRF systems: Preliminary conclusions

    NASA Technical Reports Server (NTRS)

    Kalnay, E.; Atlas, R.; Baker, W. E.; Duffy, D.; Halem, M.; Helfand, M.

    1984-01-01

    For this project, a version of the GLAS Analysis/Forecast System was developed that includes an objective dealiasing scheme as an integral part of the analysis cycle. With this system the (100 sq km) binned SASS wind data generated by S. Peteherych of AER, Canada corresponding of the period 0000 GMT 7 September 1978 to 1200 GMT 13 September 1978 was objectively dealiased. The dealiased wind fields have been requested and received by JPL, NMC and the British Meteorological Office. The first 3.5 days of objectively dealiased fields were subjectively enhanced on the McIDAS system. Approximately 20% of the wind directions were modified, and of these, about 70% were changed by less than 90 deg. Two SASS forecast impact studies, were performed using the dealiased fields, with the GLAS and the NEPRF (Navy Environmental Prediction Research Facility) analysis/forecast systems.

  3. Pressure Contact Sounding Data for NASA's Atmospheric Variability Experiment (AVE 3)

    NASA Technical Reports Server (NTRS)

    Fuelberg, H. E.; Hill, C. K.; Turner, R. E.; Long, K. E.

    1975-01-01

    The basic rawinsonde data are described at each pressure contact from the surface to sounding termination for the 41 stations participating in the AVE III measurement program that began at 0000 GMT on February 6 and ended at 1200 GMT on February 7, 1975. Soundings were taken at 3-hour intervals during a large period of the experiment from most stations within the United States east of about 105 degrees west longitude. Methods of data processing, change in reduction scheme since the AVE II pilot experiment, and data accuracy are briefly discussed. An example of contact data is presented, and microfiche cards of all the contact data are included in the appendix. The AVE III project was conducted to better understand and establish the extent of applications for meteorological satellite sensor data through correlative ground truth experiments and to provide basic experimental data for use in studies of atmospheric scales of-motion interrelationships.

  4. Successful Graded Mirror Therapy in a Patient with Chronic Deafferentation Pain in Whom Traditional Mirror Therapy was Ineffective: A Case Report.

    PubMed

    Mibu, Akira; Nishigami, Tomohiko; Tanaka, Katsuyoshi; Osumi, Michihiro; Tanabe, Akihito

    2016-04-01

    A 43-year-old man had deafferentation pain in his right upper extremity secondary to brachial plexus avulsion from a traffic accident 23 years previously. On our initial examination, he had severe tingling pain with numbness in the right fingers rated 10 on the numerical rating scale. The body perception of the affected third and fourth fingers was distorted in the flexed position. Although he performed traditional mirror therapy (TMT) for 4 weeks in the same methods as seen in previous studies, he could not obtain willed motor imagery and pain-alleviation effect. Therefore, we modified the task of TMT: Graded mirror therapy (GMT). GMT consisted of five stages: (1) observation of the mirror reflection of the unaffected side without imagining any movements of the affected side; (2) observation of the mirror reflection of the third and fourth fingers changing shape gradually adjusted from a flexed position to a extended position; (3) observation of the mirror reflection of passive movement; (4) motor imagery of affected fingers with observation of the mirror reflection (similar to TMT); (5) motor imagery of affected fingers without mirror. Each task was performed for 3 to 4 weeks. As a result, pain intensity during mirror therapy gradually decreased and finally disappeared. The body perception of the affected fingers also improved, and he could imagine the movement of the fingers with or without mirror. We suggested that GMT starting from the observation task without motor imagery may effectively decrease deafferentation pain compared to TMT. © 2016 World Institute of Pain.

  5. Implementation of structure-mapping inference by event-file binding and action planning: a model of tool-improvisation analogies.

    PubMed

    Fields, Chris

    2011-03-01

    Structure-mapping inferences are generally regarded as dependent upon relational concepts that are understood and expressible in language by subjects capable of analogical reasoning. However, tool-improvisation inferences are executed by members of a variety of non-human primate and other species. Tool improvisation requires correctly inferring the motion and force-transfer affordances of an object; hence tool improvisation requires structure mapping driven by relational properties. Observational and experimental evidence can be interpreted to indicate that structure-mapping analogies in tool improvisation are implemented by multi-step manipulation of event files by binding and action-planning mechanisms that act in a language-independent manner. A functional model of language-independent event-file manipulations that implement structure mapping in the tool-improvisation domain is developed. This model provides a mechanism by which motion and force representations commonly employed in tool-improvisation structure mappings may be sufficiently reinforced to be available to inwardly directed attention and hence conceptualization. Predictions and potential experimental tests of this model are outlined.

  6. BRIC - Brown with canisters on middeck

    NASA Image and Video Library

    1998-11-02

    STS095-E-5171 (2 Nov. 1998) --- Astronaut Curtis L. Brown, STS-95 commander, during Flight Day 3 activity aboard the Space Shuttle Discovery. The photo was taken with an electronic still camera (ESC) at 05:57:03 GMT, Nov. 2.

  7. Phenolics from Garcinia mangostana alleviate exaggerated vasoconstriction in metabolic syndrome through direct vasodilatation and nitric oxide generation.

    PubMed

    Abdallah, Hossam M; El-Bassossy, Hany M; Mohamed, Gamal A; El-Halawany, Ali M; Alshali, Khalid Z; Banjar, Zainy M

    2016-09-13

    Exaggerated vasoconstriction plays a very important role in the hypertension, a major component of metabolic syndrome (MetS). In the current work, the potential protective effect of methanol extract of fruit hulls of Garcinia mangostana L. on the exaggerated vasoconstriction in MetS has been investigated. In addition, the bioactive fraction and compounds as well as the possible mechanism of action have been illustrated. The effect of methanol extract of G. mangostana (GMT) fruit hulls on the vascular reactivity of aorta isolated from animals with MetS was investigated through bioassay-guided fractionation procedures. GMT was partitioned with chloroform (I) and the remaining mother liquor was fractionated on a Diaion HP-20 with H2O, 50 and 100 % methanol to give fractions II, III, and IV, respectively. The effect of total extract (GMT), bioactive fraction and the bioactive compounds on the vasoconstriction were examined in aortae isolated from animals with MetS by incubation for 30 min before exposing aortae to cumulative concentrations of phenylephrine (PE). The direct relaxant effect was also examined by adding cumulative concentrations of the bioactive fraction and its bioactive compounds to PE precontracted vessels. In addition, aortic nitric oxide (NO) and reactive oxygen species (ROS) production was investigated. Bioassay-guided fractionation of GMT revealed isolation of garcimangosone D (1), aromadendrin-8-C-β-D-glucopyranoside (2), 2,4,3'-trihydroxy benzophenone-6-O-β-D-glucopyranoside (3), maclurin-6-O-β-D-glucopyranoside (rhodanthenone) (4), epicatechin (5), and 2,3',4,5',6-pentahydroxy benzophenone (6). Only compounds 2, 4, and 5 significantly alleviated the exaggerated vasoconstriction of MetS aortae and in the same time showed significant vasodilation of PE pre-contracted aortae. To further illustrate the mechanism of action, the observed vasodilation was completely blocked by the nitric oxide (NO) synthase inhibitor, Nω-nitro-L-arginine methyl ester hydrochloride and inhibited by guanylate cyclase inhibitor, methylene blue. However, vasodilation was not affected by the potassium channel blocker, tetraethylammonium or the cyclooxygenase inhibitor, indomethacin. In addition, compounds 2, 4, and 5 stimulated NO generation from isolated aortae to levels comparable with acetylcholine. Furthermore, 4 and 5 inhibited reactive oxygen species generation in MetS aortae. The phenolic compounds 2, 4, and 5 ameliorated the exaggerated vasoconstriction in MetS aortae through vasodilatation-NO generation mechanism.

  8. [Effectiveness of rapid hepatitis B vaccination with different vaccine dosages and types in adults].

    PubMed

    Nie, L; Pang, X H; Zhang, Z; Ma, J X; Liu, X Y; Qiu, Q; Liang, Y; Li, Q; Zhang, W

    2017-09-10

    Objective: To evaluate the effectiveness of rapid hepatitis B vaccination with different vaccine dosages and types in adults. Methods: Adults who were aged ≥20 years, negative in the detections of 5 HBV serum markers or only anti-HBc positive were selected from Chaoyang district of Beijing. They were divided into 4 community-based specific groups and given three doses of 10 μg HepB-SCY vaccine, 20 μg HepB-SCY vaccine, 20 μg HepB-CHO vaccine and 10 μg HepB-HPY vaccine respectively at month 0, 1, and 2. Their blood samples were collected within 1-2 months after completing the three dose vaccination to test anti-HBs level by using chemiluminesent microparticle immunoassay. A face to face questionnaire survey was conducted, and χ (2) test, Mantel- Haensel χ (2) test, Kruskal-Wallis rank test and multiple logistic regression analysis were performed. Results: A total of 1 772 participants completed vaccination and observation. Their average age was 48.5 years, and 62.75 % of them were females. The anti-HBs positive rates in the groups of 10 μg HepB-SCY, 20 μg HepB-SCY, 20 μg HepB-CHO and 10 μg HepB-HPY vaccines were 79.49 % , 84.34 % , 82.50 % and 74.15 %, respectively ( P =0.005), and the geometric mean titers (GMT) were39.53 mIU/ml, 62.37 mIU/ml, 48.18 mIU/ml and 33.64 mIU/ml respectively ( P =0.025). The overall anti-HBs positive rate and GMT were 79.01 % and 41.18 mIU/ml. The anti-HBs GMT of 4 groups declined with age. The differences in anti-HBs GMT among 4 groups minimized with age. The result of logistic modeling indicated that vaccine type and dosage, age and smoking were associated with anti-HBs statistically after controlling the variables of"only anti-HBc positive or not"and"history of hepatitis B vaccination". Conclusion: Hepatitis B vaccination at dosage of 20 μg based on 0-1-2 month rapid schedule could achieved anti-HBs positive rates>80 % in middle aged and old people, which can be used as supplement of 0-1-6 month routine schedule.

  9. Safety and immunogenicity of a freeze-dried, Vero cell culture-derived, inactivated Japanese encephalitis vaccine (KD-287, ENCEVAC®) versus a mouse brain-derived inactivated Japanese encephalitis vaccine in children: a phase III, multicenter, double-blinded, randomized trial.

    PubMed

    Yun, Ki Wook; Lee, Hoan Jong; Kang, Jin Han; Eun, Byung Wook; Kim, Yae-Jean; Kim, Kyung-Hyo; Kim, Nam Hee; Hong, Young Jin; Kim, Dong Ho; Kim, Hwang Min; Cha, Sung-Ho

    2015-01-08

    Although mouse brain-derived, inactivated Japanese encephalitis vaccines (JE-MBs) have been successfully used for a long time, potential rare neurological complications have prompted the development of a Vero cell culture-derived inactivated vaccine (JE-VC). In a phase III clinical study, we aimed to compare the safety and immunogenicity of a JE-VC, KD-287 with a JE-MB, JEV-GCC, in children. In this multicenter, double-blinded, randomized controlled trial, the study population consisted of 205 healthy Korean children aged 12-23 months. Each subject was subcutaneously vaccinated with either KD-287 or JEV-GCC twice at an interval of 2 weeks and then vaccinated once 12 months after the second vaccination. Neutralizing antibodies were measured by the plaque reduction neutralization test using the homologous and heterologous, as a post hoc analysis, challenge virus strains. The three-dose regimen of KD-287 showed a comparable safety profile with JEV-GCC except higher incidence of fever after the first dose (30.4% and 14.7%, respectively). Most of the fever was mild degree (61.3% and 66.7%, respectively). KD-287 fulfilled the non-inferiority criteria for seroconversion rate (SCR) and geometric mean titer (GMT) of the neutralizing antibody, which were the primary endpoints, at 4 weeks after the third vaccination (95% CI: -1.00, 3.10 for the SCR difference and 10.8, 17.6 for the GMT ratio). The SCRs of KD-287 were all 100% and the GMTs were higher in the KD-287 group than in the JEV-GCC group after the second vaccination and before and after the third vaccination (GMT ratio: 5.59, 20.13, and 13.79, respectively, p < 0.001 in all). GMTs were higher in the KD-287 group in the heterologous analysis also (GMT ratio: 4.05, 5.15, and 4.19, respectively, p < 0.001 in all). This study suggests that the KD-287, a JE-VC is as safe as and may be more effective than the licensed MB-derived vaccine. KD-287 could thus be useful as a second-generation vaccine and substitute for the current JE-MB vaccine in Korean children. ClinicalTrials.gov: NCT01150942.

  10. Global exposure and vulnerability to multi-sector development and climate change hotspots

    NASA Astrophysics Data System (ADS)

    Byers, Edward; Gidden, Matthew; Leclère, David; Balkovic, Juraj; Burek, Peter; Ebi, Kristie; Greve, Peter; Grey, David; Havlik, Petr; Hillers, Astrid; Johnson, Nils; Kahil, Taher; Krey, Volker; Langan, Simon; Nakicenovic, Nebjosa; Novak, Robert; Obersteiner, Michael; Pachauri, Shonali; Palazzo, Amanda; Parkinson, Simon; Rao, Narasimha D.; Rogelj, Joeri; Satoh, Yusuke; Wada, Yoshihide; Willaarts, Barbara; Riahi, Keywan

    2018-05-01

    Understanding the interplay between multiple climate change risks and socioeconomic development is increasingly required to inform effective actions to manage these risks and pursue sustainable development. We calculate a set of 14 impact indicators at different levels of global mean temperature (GMT) change and socioeconomic development covering water, energy and land sectors from an ensemble of global climate, integrated assessment and impact models. The analysis includes changes in drought intensity and water stress index, cooling demand change and heat event exposure, habitat degradation and crop yield, amongst others. To investigate exposure to multi-sector climate impacts, these are combined with gridded socioeconomic projections of population and those ‘vulnerable to poverty’ from three Shared Socioeconomic Pathways (SSP) (income <10/day, currently 4.2 billion people). We show that global exposure to multi-sector risks approximately doubles between 1.5 °C and 2 °C GMT change, doubles again with 3 °C GMT change and is ~6x between the best and worst cases (SSP1/1.5 °C vs SSP3/3 °C, 0.8–4.7bi). For populations vulnerable to poverty, the exposure is an order of magnitude greater (8–32x) in the high poverty and inequality scenarios (SSP3) compared to sustainable socioeconomic development (SSP1). Whilst 85%–95% of global exposure falls to Asian and African regions, they have 91%–98% of the exposed and vulnerable population (depending on SSP/GMT combination), approximately half of which in South Asia. In higher warming scenarios, African regions have growing proportion of the global exposed and vulnerable population, ranging from 7%–17% at 1.5 °C, doubling to 14%–30% at 2 °C and again to 27%–51% at 3 °C. Finally, beyond 2 °C and at higher risk thresholds, the world’s poorest are disproportionately impacted, particularly in cases (SSP3) of high inequality in Africa and southern Asia. Sustainable development that reduces poverty, mitigates emissions and meets targets in the water, energy and land sectors has the potential for order-of-magnitude scale reductions in multi-sector climate risk for the most vulnerable.

  11. KSC01pd1821

    NASA Image and Video Library

    2001-12-07

    VANDENBERG AIR FORCE BASE, Calif. -- A Delta II rocket appears to erupt from the undulating clouds of smoke below as it launches with the joint NASA/French Space Agency oceanography satellite Jason 1 and Thermosphere Ionosphere Mesosphere Energetics and Dynamics satellite aboard. Liftoff from Launch Complex 2W occurred at 7:07 a.m. PST (10:07 a.m. EST or 15:07 GMT). Jason 1 joins the orbiting Topex/Poseidon satellite to continue observations of the global climate interaction occurring between the sea and the atmosphere as a result of stored solar energy. Instruments on Jason 1 will map variations in ocean surface topography to monitor world ocean circulation, study interactions of the oceans and atmosphere, improve climate predictions and observe events like El Nino. The mission is expected to last three years. The TIMED satellite will study a little-known region above the atmosphere, some 40 to 110 miles from the Earth's surface. Studying this region has been nearly impossible until now because conventional airplanes and balloons cannot reach this high altitude, and it is too low for direct satellite measurements

  12. Knowledge maps: a tool for online assessment with automated feedback.

    PubMed

    Ho, Veronica W; Harris, Peter G; Kumar, Rakesh K; Velan, Gary M

    2018-12-01

    In higher education, most assessments or examinations comprise either multiple-choice items or open-ended questions such as modified essay questions (MEQs). Online concept and knowledge maps are potential tools for assessment, which might emphasize meaningful, integrated understanding of phenomena. We developed an online knowledge-mapping assessment tool, which provides automated feedback on student-submitted maps. We conducted a pilot study to investigate the potential utility of online knowledge mapping as a tool for automated assessment by comparing the scores generated by the software with manual grading of a MEQ on the same topic for a cohort of first-year medical students. In addition, an online questionnaire was used to gather students' perceptions of the tool. Map items were highly discriminating between students of differing knowledge of the topic overall. Regression analysis showed a significant correlation between map scores and MEQ scores, and responses to the questionnaire regarding use of knowledge maps for assessment were overwhelmingly positive. These results suggest that knowledge maps provide a similar indication of students' understanding of a topic as a MEQ, with the advantage of instant, consistent computer grading and time savings for educators. Online concept and knowledge maps could be a useful addition to the assessment repertoire in higher education.

  13. SeaWiFS: North Pacific Storm

    NASA Technical Reports Server (NTRS)

    2002-01-01

    An extratropical storm can be seen swirling over the North Pacific just south of Alaska. This SeaWiFS image was collected yesterday at 23:20 GMT. Credit: Provided by the SeaWiFS Project, NASA/Goddard Space Flight Center, and ORBIMAGE

  14. Mukai gives thumbs up on middeck

    NASA Image and Video Library

    1998-10-29

    STS095-E-5037 (10-29-98) --- Holding a notebook filled with Flight Day 1 activity, payload specialist Chiaki Mukai gives an "all okay" signal. The photograph was taken with an electronic still camera (ESC) at 10:04:30 GMT, Oct. 29.

  15. Relationships between lava and tephra volumes erupted during the 26 October 2013 lava fountaining episode from the New Southeast Crater of Etna

    NASA Astrophysics Data System (ADS)

    Andronico, Daniele; Behncke, Boris; Cristaldi, Antonio; De Beni, Emanuela; Lo Castro, Maria Deborah; Lopez, Manuela; Scollo, Simona

    2014-05-01

    Determining the volume of the various products of a volcanic eruption can be notoriously difficult, especially if the products encompass lava, distal tephra, and proximal pyroclastics mostly deposited on a growing volcanic cone. We evaluated, for the first time at Etna, the total masses and volumes of both lava flows and pyroclastic material emitted during the 26 October 2013 episode of lava fountaining at Etna's New Southeast Crater (NSEC), correlating them with mass eruption rate and total grain-size of the fallout deposit. The episode was heralded by Strombolian activity starting on early 25 October and gradually intensifying throughout the day, blending into a continuous lava fountain early on 26 October. An eruption column started to rise to ~4 km above Etna's summit before being bent toward WSW by the wind. Lava fountaining up to 500 m high continued until ~10:00 GMT, and then started to diminish significantly; by 13:00 GMT, the episode was over. 'A'¯a lava flows were emitted throughout the phase of lava fountaining, forming a three-lobed lava field toward south and a minor lava flow toward east. After the episode, we carried out field surveys to map both the fallout deposits and the lava flows. Distal tephra was deposited to at least 110 km distance from the vent and possibly beyond the south coast of Sicily. The dispersal area of the tephra deposit was quite narrow on the ground, the load per unit area declining very rapidly away from the main dispersal axis. In the very proximal area (~1.6 km from the NSEC), the fallout deposit formed a 3-cm thick bed of scoriaceous lapilli (peaked at -2 phi) amounting to 22.25 kg/m2. The tephra load dropped up to 0.4 kg/m2 in the town of Adrano (16 km), where we found a continuous, thin layer of medium-sized ash. Finally, the fallout consisted of fine ash (~99 % of clasts

  16. Concept-Mapping Tools and the Development of Students' Critical-Thinking Skills

    ERIC Educational Resources Information Center

    Tseng, Sheng-Shiang

    2015-01-01

    Developing students' critical-thinking skills has recently received attention at all levels of education. This article proposes the use of concept-mapping tools to improve students' critical-thinking skills. The article introduces a Web-based concept-mapping tool--Popplet--and demonstrates its application for teaching critical-thinking skills in…

  17. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007747 (15 June 2013) --- The European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” is about to dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  18. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007862 (15 June 2013) --- The European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” is about to dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  19. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007859 (15 June 2013) --- The European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” is about to dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  20. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007748 (15 June 2013) --- The European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” is about to dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  1. Currie with stowage bags

    NASA Image and Video Library

    1998-12-12

    S88-E-5135 (12-12-98) --- Astronaut Nancy J. Currie, mission specialist, totes a lamp while sorting through a mountain of bags filled with hardware, equipment and supplies onboard Endeavour. The photo was taken with an electronic still camera at 03:49:03 GMT, Dec. 12.

  2. ISS Passes over Hurricane_Irma_GMT248-1510

    NASA Image and Video Library

    2017-09-05

    The International Space Station’s external cameras captured a dramatic view of Hurricane Irma as it moved across the Atlantic Ocean Sept. 5. The National Hurricane Center had recently upgraded Irma to a Category 5 storm with hurricane warnings issued across the Caribbean.

  3. Map based multimedia tool on Pacific theatre in World War II

    NASA Astrophysics Data System (ADS)

    Pakala Venkata, Devi Prasada Reddy

    Maps have been used for depicting data of all kinds in the educational community for many years. A standout amongst the rapidly changing methods of teaching is through the development of interactive and dynamic maps. The emphasis of the thesis is to develop an intuitive map based multimedia tool, which provides a timeline of battles and events in the Pacific theatre of World War II. The tool contains summaries of major battles and commanders and has multimedia content embedded in it. The primary advantage of this Map tool is that one can quickly know about all the battles and campaigns of the Pacific Theatre by accessing Timeline of Battles in each region or Individual Battles in each region or Summary of each Battle in an interactive way. This tool can be accessed via any standard web browser and motivate the user to know more about the battles involved in the Pacific Theatre. It was made responsive using Google maps API, JavaScript, HTML5 and CSS.

  4. An open source, web based, simple solution for seismic data dissemination and collaborative research

    NASA Astrophysics Data System (ADS)

    Diviacco, Paolo

    2005-06-01

    Collaborative research and data dissemination in the field of geophysical exploration need network tools that can access large amounts of data from anywhere using any PC or workstation. Simple solutions based on a combination of Open Source software can be developed to address such requests, exploiting the possibilities offered by the web technologies, and at the same time avoiding the costs and inflexibility of commercial systems. A viable solution consists of MySQL for data storage and retrieval, CWP/SU and GMT for data visualisation and a scripting layer driven by PHP that allows users to access the system via an Apache web server. In the light of the experience building the on-line archive of seismic data of the Istituto Nazionale di Oceanografia e di Geofisica Sperimentale (OGS), we describe the solutions and the methods adopted, with a view to stimulate both the attitude of network collaborative research of other institutions similar to ours, and the development of different applications.

  5. Assessing dangerous climate change through an update of the Intergovernmental Panel on Climate Change (IPCC) "reasons for concern".

    PubMed

    Smith, Joel B; Schneider, Stephen H; Oppenheimer, Michael; Yohe, Gary W; Hare, William; Mastrandrea, Michael D; Patwardhan, Anand; Burton, Ian; Corfee-Morlot, Jan; Magadza, Chris H D; Füssel, Hans-Martin; Pittock, A Barrie; Rahman, Atiq; Suarez, Avelino; van Ypersele, Jean-Pascal

    2009-03-17

    Article 2 of the United Nations Framework Convention on Climate Change [United Nations (1992) http://unfccc.int/resource/docs/convkp/conveng.pdf. Accessed February 9, 2009] commits signatory nations to stabilizing greenhouse gas concentrations in the atmosphere at a level that "would prevent dangerous anthropogenic interference (DAI) with the climate system." In an effort to provide some insight into impacts of climate change that might be considered DAI, authors of the Third Assessment Report (TAR) of the Intergovernmental Panel on Climate Change (IPCC) identified 5 "reasons for concern" (RFCs). Relationships between various impacts reflected in each RFC and increases in global mean temperature (GMT) were portrayed in what has come to be called the "burning embers diagram." In presenting the "embers" in the TAR, IPCC authors did not assess whether any single RFC was more important than any other; nor did they conclude what level of impacts or what atmospheric concentrations of greenhouse gases would constitute DAI, a value judgment that would be policy prescriptive. Here, we describe revisions of the sensitivities of the RFCs to increases in GMT and a more thorough understanding of the concept of vulnerability that has evolved over the past 8 years. This is based on our expert judgment about new findings in the growing literature since the publication of the TAR in 2001, including literature that was assessed in the IPCC Fourth Assessment Report (AR4), as well as additional research published since AR4. Compared with results reported in the TAR, smaller increases in GMT are now estimated to lead to significant or substantial consequences in the framework of the 5 "reasons for concern."

  6. Scaling Irregular Applications through Data Aggregation and Software Multithreading

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Morari, Alessandro; Tumeo, Antonino; Chavarría-Miranda, Daniel

    Bioinformatics, data analytics, semantic databases, knowledge discovery are emerging high performance application areas that exploit dynamic, linked data structures such as graphs, unbalanced trees or unstructured grids. These data structures usually are very large, requiring significantly more memory than available on single shared memory systems. Additionally, these data structures are difficult to partition on distributed memory systems. They also present poor spatial and temporal locality, thus generating unpredictable memory and network accesses. The Partitioned Global Address Space (PGAS) programming model seems suitable for these applications, because it allows using a shared memory abstraction across distributed-memory clusters. However, current PGAS languagesmore » and libraries are built to target regular remote data accesses and block transfers. Furthermore, they usually rely on the Single Program Multiple Data (SPMD) parallel control model, which is not well suited to the fine grained, dynamic and unbalanced parallelism of irregular applications. In this paper we present {\\bf GMT} (Global Memory and Threading library), a custom runtime library that enables efficient execution of irregular applications on commodity clusters. GMT integrates a PGAS data substrate with simple fork/join parallelism and provides automatic load balancing on a per node basis. It implements multi-level aggregation and lightweight multithreading to maximize memory and network bandwidth with fine-grained data accesses and tolerate long data access latencies. A key innovation in the GMT runtime is its thread specialization (workers, helpers and communication threads) that realize the overall functionality. We compare our approach with other PGAS models, such as UPC running using GASNet, and hand-optimized MPI code on a set of typical large-scale irregular applications, demonstrating speedups of an order of magnitude.« less

  7. Assessing dangerous climate change through an update of the Intergovernmental Panel on Climate Change (IPCC) “reasons for concern”

    PubMed Central

    Smith, Joel B.; Schneider, Stephen H.; Oppenheimer, Michael; Yohe, Gary W.; Hare, William; Mastrandrea, Michael D.; Patwardhan, Anand; Burton, Ian; Corfee-Morlot, Jan; Magadza, Chris H. D.; Füssel, Hans-Martin; Pittock, A. Barrie; Rahman, Atiq; Suarez, Avelino; van Ypersele, Jean-Pascal

    2009-01-01

    Article 2 of the United Nations Framework Convention on Climate Change [United Nations (1992) http://unfccc.int/resource/docs/convkp/conveng.pdf. Accessed February 9, 2009] commits signatory nations to stabilizing greenhouse gas concentrations in the atmosphere at a level that “would prevent dangerous anthropogenic interference (DAI) with the climate system.” In an effort to provide some insight into impacts of climate change that might be considered DAI, authors of the Third Assessment Report (TAR) of the Intergovernmental Panel on Climate Change (IPCC) identified 5 “reasons for concern” (RFCs). Relationships between various impacts reflected in each RFC and increases in global mean temperature (GMT) were portrayed in what has come to be called the “burning embers diagram.” In presenting the “embers” in the TAR, IPCC authors did not assess whether any single RFC was more important than any other; nor did they conclude what level of impacts or what atmospheric concentrations of greenhouse gases would constitute DAI, a value judgment that would be policy prescriptive. Here, we describe revisions of the sensitivities of the RFCs to increases in GMT and a more thorough understanding of the concept of vulnerability that has evolved over the past 8 years. This is based on our expert judgment about new findings in the growing literature since the publication of the TAR in 2001, including literature that was assessed in the IPCC Fourth Assessment Report (AR4), as well as additional research published since AR4. Compared with results reported in the TAR, smaller increases in GMT are now estimated to lead to significant or substantial consequences in the framework of the 5 “reasons for concern.” PMID:19251662

  8. Memory immune response and safety of a booster dose of Japanese encephalitis chimeric virus vaccine (JE-CV) in JE-CV-primed children

    PubMed Central

    Feroldi, Emmanuel; Capeding, Maria Rosario; Boaz, Mark; Gailhardou, Sophia; Meric, Claude; Bouckenooghe, Alain

    2013-01-01

    Japanese encephalitis chimeric virus vaccine (JE-CV) is a licensed vaccine indicated in a single dose administration for primary immunization. This controlled phase III comparative trial enrolled children aged 36–42 mo in the Philippines. 345 children who had received one dose of JE-CV in a study two years earlier, received a JE-CV booster dose. 105 JE-vaccine-naïve children in general good health were randomized to receive JE-CV (JE-vaccine naïve group; 46 children) or varicella vaccine (safety control group; 59 children). JE neutralizing antibody titers were assessed using PRNT50. Immunological memory was observed in children who had received the primary dose of JE-CV before. Seven days after the JE-CV booster dose administration, 96.2% and 66.8% of children were seroprotected and had seroconverted, respectively, and the geometric mean titer (GMT) was 231 1/dil. Twenty-eight days after the JE-CV booster dose seroprotection and seroconversion were achieved in 100% and 95.3% of children, respectively, and the GMT was 2,242 1/dil. In contrast, only 15.4% of JE-CV-vaccine naïve children who had not received any prior JE vaccine were seroprotected seven days after they received JE-CV. One year after receiving the JE-CV booster dose, 99.4% of children remained seroprotected. We conclude that JE-CV is effective and safe, both as a single dose and when administrated as a booster dose. A booster dose increases the peak GMT above the peak level reached after primary immunization and the antibody persistence is maintained at least one year after the JE-CV booster dose administration. Five year follow up is ongoing. PMID:23442823

  9. Memory immune response and safety of a booster dose of Japanese encephalitis chimeric virus vaccine (JE-CV) in JE-CV-primed children.

    PubMed

    Feroldi, Emmanuel; Capeding, Maria Rosario; Boaz, Mark; Gailhardou, Sophia; Meric, Claude; Bouckenooghe, Alain

    2013-04-01

    Japanese encephalitis chimeric virus vaccine (JE-CV) is a licensed vaccine indicated in a single dose administration for primary immunization. This controlled phase III comparative trial enrolled children aged 36-42 mo in the Philippines. 345 children who had received one dose of JE-CV in a study two years earlier, received a JE-CV booster dose. 105 JE-vaccine-naïve children in general good health were randomized to receive JE-CV (JE-vaccine naïve group; 46 children) or varicella vaccine (safety control group; 59 children). JE neutralizing antibody titers were assessed using PRNT50. Immunological memory was observed in children who had received the primary dose of JE-CV before. Seven days after the JE-CV booster dose administration, 96.2% and 66.8% of children were seroprotected and had seroconverted, respectively, and the geometric mean titer (GMT) was 231 1/dil. Twenty-eight days after the JE-CV booster dose seroprotection and seroconversion were achieved in 100% and 95.3% of children, respectively, and the GMT was 2,242 1/dil. In contrast, only 15.4% of JE-CV-vaccine naïve children who had not received any prior JE vaccine were seroprotected seven days after they received JE-CV. One year after receiving the JE-CV booster dose, 99.4% of children remained seroprotected. We conclude that JE-CV is effective and safe, both as a single dose and when administrated as a booster dose. A booster dose increases the peak GMT above the peak level reached after primary immunization and the antibody persistence is maintained at least one year after the JE-CV booster dose administration. Five year follow up is ongoing.

  10. Immunogenicity and safety of an E. coli-produced bivalent human papillomavirus (type 16 and 18) vaccine: A randomized controlled phase 2 clinical trial.

    PubMed

    Wu, Ting; Hu, Yue-Mei; Li, Juan; Chu, Kai; Huang, Shou-Jie; Zhao, Hui; Wang, Zhong-Ze; Yang, Chang-Lin; Jiang, Han-Min; Wang, Yi-Jun; Lin, Zhi-Jie; Pan, Hui-Rong; Sheng, Wei; Wei, Fei-Xue; Li, Shao-Wei; Wang, Ying; Zhu, Feng-Cai; Li, Chang-Gui; Zhang, Jun; Xia, Ning-Shao

    2015-07-31

    This study aimed to investigate the dosage, immunogenicity and safety profile of a novel human papillomavirus (HPV) types 16 and 18 bivalent vaccine produced by E. coli. This randomized, double-blinded, controlled phase 2 trial enrolled women aged 18-25 years in China. Totally 1600 eligible participants were randomized to receive 90μg, 60μg, or 30μg of the recombinant HPV 16/18 bivalent vaccine or the control hepatitis B vaccine on a 0, 1 and 6 month schedule. The designated doses are the combined micrograms of HPV16 and 18 VLPs with dose ratio of 2:1. The immunogenicity of the vaccines was assessed by measuring anti-HPV 16 and 18 neutralizing antibodies and total IgG antibodies. Safety of the vaccine was assessed. All but one of the seronegative participants who received 3 doses of the HPV vaccines seroconverted at month 7 for anti-HPV 16/18 neutralizing antibodies and IgG antibodies. For HPV 16, the geometric mean titers (GMTs) of the neutralizing antibodies were similar between the 60μg (GMT=10,548) and 90μg (GMT=12,505) HPV vaccine groups and were significantly higher than those in the 30μg (GMT=7596) group. For HPV 18, the GMTs of the neutralizing antibodies were similar among the 3 groups. The HPV vaccine was well tolerated. No vaccine-associated serious adverse events were identified. The prokaryotic-expressed HPV vaccine is safe and immunogenic in women aged 18-25 years. The 60μg dosage formulation was selected for further investigation for efficacy. NCT01356823. Copyright © 2015 Elsevier Ltd. All rights reserved.

  11. International Space Station Columbus Payload SoLACES Degradation Assessment

    NASA Technical Reports Server (NTRS)

    Harman, William; Schmidl, William; Mikatarian, Ron; Soares, Carlos; Schmidtke, Gerhard; Erhardt, Christian

    2014-01-01

    SOLAR is a European Space Agency (ESA) payload deployed on the International Space Station (ISS) and located on the Columbus Laboratory. It is located on the Columbus External Payload Facility in a zenith location. The objective of the SOLAR payload is to study the Sun. The SOLAR payload consists of three instruments that allow for measurement of virtually the entire electromagnetic spectrum (17 nm to 100 um). The three payload instruments are SOVIM (SOlar Variable and Irradiance Monitor), SOLSPEC (SOLar SPECctral Irradiance measurements), and SolACES (SOLar Auto-Calibrating Extreme UV/UV Spectrophotometers). The SolACES payload includes a set of 4 spectrometers that measure the solar EUV flux from 17 nm to 220 nm. One of these 4 spectrometers failed early on (before deployment). EUV data is important in understanding the solar dynamo. Also, EUV flux is the source of most of the ionization that produces the ionosphere plasma. Plasma production is important in understanding the ionosphere environment. The ionosphere conditions affect many subjects including spacecraft charging, dynamo processes, instabilities, and communications. The 3 remaining spectrometers have collected valuable data during the historically low solar cycle 24. Some of this data will be presented. A significant trend in degradation of the remaining SolACES spectrometers was observed towards the end of CY2010 (GMT 310) through mid CY 2011 (GMT 132). The Principle Investigators of SolACES initiated a Mission Evaluation Room (MER) Chit to request an investigation of the degradation in CY 2011 (GMT 230). The Boeing Space Environments team was asked to respond to the ESA initiated MER Chit request to investigate the cause of the degradation. This paper will discuss the findings of that investigation.

  12. Emergence of new hydrologic regimes of surface water resources in the conterminous United States under future warming

    NASA Astrophysics Data System (ADS)

    Leng, Guoyong; Huang, Maoyi; Voisin, Nathalie; Zhang, Xuesong; Asrar, Ghassem R.; Leung, L. Ruby

    2016-11-01

    Despite the importance of surface water to people and ecosystems, few studies have explored detectable changes in surface water supply in a changing climate, given its large natural variability. Here we analyze runoff projections from the Variable Infiltration Capacity hydrological model driven by 97 downscaled and bias-corrected Coupled Model Intercomparison Project Phase 5 climate projections over the conterminous United States (CONUS). Our results show that more than 40% of the CONUS land area will experience significant changes in the probability distribution functions (i.e. PDFs) of summer and winter runoff by the end of the 21st century, which may pose great challenges to future surface water supply. Sub-basin mean runoff PDFs are projected to change significantly after 2040s depending on the emission scenarios, with earliest occurrence in the Pacific Northwest and northern California regions. When examining the response as a function of changes in the global mean temperature (ΔGMT), a linear relationship is revealed at the 95% confidence level. Generally, 1 °C increase of GMT leads to 11% and 17% more lands experiencing changes in summer and winter runoff PDFs, respectively. Such changes in land fraction scale with ΔGMT at the country scale independent of emission scenarios, but the same relationship does not necessarily hold at sub-basin scales, due to the larger role of atmospheric circulation changes and their uncertainties on regional precipitation. Further analyses show that the emergence of significant changes in sub-basin runoff PDFs is indicative of the emergence of new hydrology regimes and it is dominated by the changes in variability rather than shift in the mean, regardless of the emission scenarios.

  13. Risk factors for inadequate antibody response to primary rabies vaccination in dogs under one year of age

    PubMed Central

    Wallace, Ryan M.; Pees, Anna; Blanton, Jesse B.

    2017-01-01

    Ensuring the adequacy of response to rabies vaccination in dogs is important, particularly in the context of pet travel. Few studies have examined the factors associated with dogs’ failure to achieve an adequate antibody titer after vaccination (0.5 IU/ml). This study evaluated rabies antibody titers in dogs after primary vaccination. Dogs under one year of age whose serum was submitted to a reference laboratory for routine diagnostics, and which had no prior documented history of vaccination were enrolled (n = 8,011). Geometric mean titers (GMT) were calculated and univariate analysis was performed to assess factors associated with failure to achieve 0.5 IU/mL. Dogs vaccinated at >16 weeks of age had a significantly higher GMT compared to dogs vaccinated at a younger age (1.64 IU/ml, 1.57–1.72, ANOVA p < 0.01). There was no statistical difference in GMT between dogs vaccinated <12 weeks and dogs vaccinated 12–16 weeks (1.22 IU/ml and 1.21 IU/ml). The majority of dogs failed to reach an adequate titer within the first 3 days of primary vaccination; failure rates were also high if the interval from vaccination to titer check was greater than 90 days. Over 90% of dogs that failed primary vaccination were able to achieve adequate titers after booster vaccination. The ideal timing for blood draw is 8–30 days after primary vaccination. In the event of a failure, most dogs will achieve an adequate serologic response upon a repeat titer (in the absence of booster vaccination). Booster vaccination after failure provided the highest probability of an acceptable titer. PMID:28759602

  14. Advanced structural design for precision radial velocity instruments

    NASA Astrophysics Data System (ADS)

    Baldwin, Dan; Szentgyorgyi, Andrew; Barnes, Stuart; Bean, Jacob; Ben-Ami, Sagi; Brennan, Patricia; Budynkiewicz, Jamie; Chun, Moo-Young; Conroy, Charlie; Crane, Jeffrey D.; Epps, Harland; Evans, Ian; Evans, Janet; Foster, Jeff; Frebel, Anna; Gauron, Thomas; Guzman, Dani; Hare, Tyson; Jang, Bi-Ho; Jang, Jeong-Gyun; Jordan, Andres; Kim, Jihun; Kim, Kang-Min; Mendes de Oliveira, Claudia; Lopez-Morales, Mercedes; McCracken, Kenneth; McMuldroch, Stuart; Miller, Joseph; Mueller, Mark; Oh, Jae Sok; Ordway, Mark; Park, Byeong-Gon; Park, Chan; Park, Sung-Joon; Paxson, Charles; Phillips, David; Plummer, David; Podgorski, William; Seifahrt, Andreas; Stark, Daniel; Steiner, Joao; Uomoto, Alan; Walsworth, Ronald; Yu, Young-Sam

    2016-07-01

    The GMT-Consortium Large Earth Finder (G-CLEF) is an echelle spectrograph with precision radial velocity (PRV) capability that will be a first light instrument for the Giant Magellan Telescope (GMT). G-CLEF has a PRV precision goal of 40 cm/sec (10 cm/s for multiple measurements) to enable detection of Earth-like exoplanets in the habitable zones of sun-like stars1. This precision is a primary driver of G-CLEF's structural design. Extreme stability is necessary to minimize image motions at the CCD detectors. Minute changes in temperature, pressure, and acceleration environments cause structural deformations, inducing image motions which degrade PRV precision. The instrument's structural design will ensure that the PRV goal is achieved under the environments G-CLEF will be subjected to as installed on the GMT azimuth platform, including: Millikelvin (0.001 °K) thermal soaks and gradients 10 millibar changes in ambient pressure Changes in acceleration due to instrument tip/tilt and telescope slewing Carbon fiber/cyanate composite was selected for the optical bench structure in order to meet performance goals. Low coefficient of thermal expansion (CTE) and high stiffness-to-weight are key features of the composite optical bench design. Manufacturability and serviceability of the instrument are also drivers of the design. In this paper, we discuss analyses leading to technical choices made to minimize G-CLEF's sensitivity to changing environments. Finite element analysis (FEA) and image motion sensitivity studies were conducted to determine PRV performance under operational environments. We discuss the design of the optical bench structure to optimize stiffness-to-weight and minimize deformations due to inertial and pressure effects. We also discuss quasi-kinematic mounting of optical elements and assemblies, and optimization of these to ensure minimal image motion under thermal, pressure, and inertial loads expected during PRV observations.

  15. Risk factors for inadequate antibody response to primary rabies vaccination in dogs under one year of age.

    PubMed

    Wallace, Ryan M; Pees, Anna; Blanton, Jesse B; Moore, Susan M

    2017-07-01

    Ensuring the adequacy of response to rabies vaccination in dogs is important, particularly in the context of pet travel. Few studies have examined the factors associated with dogs' failure to achieve an adequate antibody titer after vaccination (0.5 IU/ml). This study evaluated rabies antibody titers in dogs after primary vaccination. Dogs under one year of age whose serum was submitted to a reference laboratory for routine diagnostics, and which had no prior documented history of vaccination were enrolled (n = 8,011). Geometric mean titers (GMT) were calculated and univariate analysis was performed to assess factors associated with failure to achieve 0.5 IU/mL. Dogs vaccinated at >16 weeks of age had a significantly higher GMT compared to dogs vaccinated at a younger age (1.64 IU/ml, 1.57-1.72, ANOVA p < 0.01). There was no statistical difference in GMT between dogs vaccinated <12 weeks and dogs vaccinated 12-16 weeks (1.22 IU/ml and 1.21 IU/ml). The majority of dogs failed to reach an adequate titer within the first 3 days of primary vaccination; failure rates were also high if the interval from vaccination to titer check was greater than 90 days. Over 90% of dogs that failed primary vaccination were able to achieve adequate titers after booster vaccination. The ideal timing for blood draw is 8-30 days after primary vaccination. In the event of a failure, most dogs will achieve an adequate serologic response upon a repeat titer (in the absence of booster vaccination). Booster vaccination after failure provided the highest probability of an acceptable titer.

  16. Sinking Maps: A Conceptual Tool for Visual Metaphor

    ERIC Educational Resources Information Center

    Giampa, Joan Marie

    2012-01-01

    Sinking maps, created by Northern Virginia Community College professor Joan Marie Giampa, are tools that teach fine art students how to construct visual metaphor by conceptually mapping sensory perceptions. Her dissertation answers the question, "Can visual metaphor be conceptually mapped in the art classroom?" In the Prologue, Giampa…

  17. Prototype of Partial Cutting Tool of Geological Map Images Distributed by Geological Web Map Service

    NASA Astrophysics Data System (ADS)

    Nonogaki, S.; Nemoto, T.

    2014-12-01

    Geological maps and topographical maps play an important role in disaster assessment, resource management, and environmental preservation. These map information have been distributed in accordance with Web services standards such as Web Map Service (WMS) and Web Map Tile Service (WMTS) recently. In this study, a partial cutting tool of geological map images distributed by geological WMTS was implemented with Free and Open Source Software. The tool mainly consists of two functions: display function and cutting function. The former function was implemented using OpenLayers. The latter function was implemented using Geospatial Data Abstraction Library (GDAL). All other small functions were implemented by PHP and Python. As a result, this tool allows not only displaying WMTS layer on web browser but also generating a geological map image of intended area and zoom level. At this moment, available WTMS layers are limited to the ones distributed by WMTS for the Seamless Digital Geological Map of Japan. The geological map image can be saved as GeoTIFF format and WebGL format. GeoTIFF is one of the georeferenced raster formats that is available in many kinds of Geographical Information System. WebGL is useful for confirming a relationship between geology and geography in 3D. In conclusion, the partial cutting tool developed in this study would contribute to create better conditions for promoting utilization of geological information. Future work is to increase the number of available WMTS layers and the types of output file format.

  18. Cabana shaves on middeck

    NASA Image and Video Library

    1998-12-08

    S88-E-5166 (12-08-98) --- Astronaut Robert D. Cabana, mission commander, shaves on Endeavour's middeck. Sergei K. Krikalev, mission specialist representing the Russian Space Agency, is in the background. The photo was taken with an electronic still camera (ESC) at 23:20:40 GMT, Dec. 8.

  19. iss009e21540

    NASA Image and Video Library

    2004-09-05

    ISS009-E-21540 (5 September 2004) --- While Frances was moving destructively through Florida, another hurricane formed Sunday, September 5, in the central Atlantic. Quickly strengthening, Ivan was photographed at 10:27:46 (GMT) from the International Space Station, flying above Earth at an altitude of 235 miles.

  20. Brown on aft flight deck with microphone

    NASA Image and Video Library

    1998-10-31

    STS095-E-5177 (31 Oct. 1998) --- On Discovery's aft flight deck, astronaut Curtis L. Brown Jr., STS-95 commander, checks over notes with ground controllers in Houston. The photo was taken with an electronic still camera (ESC) at 00:41:51 GMT, Oct. 31.

  1. Brown on middeck

    NASA Image and Video Library

    1998-10-30

    STS095-E-5054 (30 Oct. 1998) --- Astronaut Curtis L. Brown, STS-95 commander, has a handful of vials as he checks a notebook during Flight Day two activity onboard the Space Shuttle Discovery. The photo was taken with an electronic still camera at 10:42:49 GMT, Oct. 30.

  2. Improved pattern scaling approaches for the use in climate impact studies

    NASA Astrophysics Data System (ADS)

    Herger, Nadja; Sanderson, Benjamin M.; Knutti, Reto

    2015-05-01

    Pattern scaling is a simple way to produce climate projections beyond the scenarios run with expensive global climate models (GCMs). The simplest technique has known limitations and assumes that a spatial climate anomaly pattern obtained from a GCM can be scaled by the global mean temperature (GMT) anomaly. We propose alternatives and assess their skills and limitations. One approach which avoids scaling is to consider a period in a different scenario with the same GMT change. It is attractive as it provides patterns of any temporal resolution that are consistent across variables, and it does not distort variability. Second, we extend the traditional approach with a land-sea contrast term, which provides the largest improvements over the traditional technique. When interpolating between known bounding scenarios, the proposed methods significantly improve the accuracy of the pattern scaled scenario with little computational cost. The remaining errors are much smaller than the Coupled Model Intercomparison Project Phase 5 model spread.

  3. An Intracranial Electroencephalography (iEEG) Brain Function Mapping Tool with an Application to Epilepsy Surgery Evaluation.

    PubMed

    Wang, Yinghua; Yan, Jiaqing; Wen, Jianbin; Yu, Tao; Li, Xiaoli

    2016-01-01

    Before epilepsy surgeries, intracranial electroencephalography (iEEG) is often employed in function mapping and epileptogenic foci localization. Although the implanted electrodes provide crucial information for epileptogenic zone resection, a convenient clinical tool for electrode position registration and Brain Function Mapping (BFM) visualization is still lacking. In this study, we developed a BFM Tool, which facilitates electrode position registration and BFM visualization, with an application to epilepsy surgeries. The BFM Tool mainly utilizes electrode location registration and function mapping based on pre-defined brain models from other software. In addition, the electrode node and mapping properties, such as the node size/color, edge color/thickness, mapping method, can be adjusted easily using the setting panel. Moreover, users may manually import/export location and connectivity data to generate figures for further application. The role of this software is demonstrated by a clinical study of language area localization. The BFM Tool helps clinical doctors and researchers visualize implanted electrodes and brain functions in an easy, quick and flexible manner. Our tool provides convenient electrode registration, easy brain function visualization, and has good performance. It is clinical-oriented and is easy to deploy and use. The BFM tool is suitable for epilepsy and other clinical iEEG applications.

  4. An Intracranial Electroencephalography (iEEG) Brain Function Mapping Tool with an Application to Epilepsy Surgery Evaluation

    PubMed Central

    Wang, Yinghua; Yan, Jiaqing; Wen, Jianbin; Yu, Tao; Li, Xiaoli

    2016-01-01

    Objects: Before epilepsy surgeries, intracranial electroencephalography (iEEG) is often employed in function mapping and epileptogenic foci localization. Although the implanted electrodes provide crucial information for epileptogenic zone resection, a convenient clinical tool for electrode position registration and Brain Function Mapping (BFM) visualization is still lacking. In this study, we developed a BFM Tool, which facilitates electrode position registration and BFM visualization, with an application to epilepsy surgeries. Methods: The BFM Tool mainly utilizes electrode location registration and function mapping based on pre-defined brain models from other software. In addition, the electrode node and mapping properties, such as the node size/color, edge color/thickness, mapping method, can be adjusted easily using the setting panel. Moreover, users may manually import/export location and connectivity data to generate figures for further application. The role of this software is demonstrated by a clinical study of language area localization. Results: The BFM Tool helps clinical doctors and researchers visualize implanted electrodes and brain functions in an easy, quick and flexible manner. Conclusions: Our tool provides convenient electrode registration, easy brain function visualization, and has good performance. It is clinical-oriented and is easy to deploy and use. The BFM tool is suitable for epilepsy and other clinical iEEG applications. PMID:27199729

  5. Analyzing the Scientific Evolution of Social Work Using Science Mapping

    ERIC Educational Resources Information Center

    Martínez, Ma Angeles; Cobo, Manuel Jesús; Herrera, Manuel; Herrera-Viedma, Enrique

    2015-01-01

    Objectives: This article reports the first science mapping analysis of the social work field, which shows its conceptual structure and scientific evolution. Methods: Science Mapping Analysis Software Tool, a bibliometric science mapping tool based on co-word analysis and h-index, is applied using a sample of 18,794 research articles published from…

  6. Construct Maps: A Tool to Organize Validity Evidence

    ERIC Educational Resources Information Center

    McClarty, Katie Larsen

    2013-01-01

    The construct map is a promising tool for organizing the data standard-setting panelists interpret. The challenge in applying construct maps to standard-setting procedures will be the judicious selection of data to include within this organizing framework. Therefore, this commentary focuses on decisions about what to include in the construct map.…

  7. Earth Observation

    NASA Image and Video Library

    2014-07-08

    ISS040-E-050750 (7 July 2014) --- One of the Expedition 40 crew members aboard the International Space Station photographed a series of images of Typhoon Neoguri in the vicinity of Japan and Taiwan on July 7, 2014. This oblique 35mm focal length view was photographed at 07:41:29 GMT.

  8. Translations on North Korea, Number 573.

    DTIC Science & Technology

    1978-02-02

    Production 61 Ore Production 61 Changsong Mine 61 - c - KIM IL-SONG PHOTOS APPEARING IN ’NODONG SINMUN,’ DECEMBER 1977 [Editorial Report] The...Pyongyang Domestic Service in Korean 0800 GMT 12 Jan 78 SK] CHANGSONG MINE—The Changsong mine has overfulfilled the tagets set for tunneling by 270

  9. TES Instrument Operational Status

    Atmospheric Science Data Center

    2017-09-21

    ... resumed science collection on May 30, 2017 with both full travel on the translator and a working metrology laser.   UPDATE: ... UPDATE:   The TES ICS translator has stalled a third time in as many weeks.  The stall occurred at 06:07 GMT on Aug 4, 2016. More ...

  10. Earth observation taken by the Expedition 28 crew

    NASA Image and Video Library

    2011-08-24

    ISS028-E-031904 (24 Aug. 2011) --- This photo of Hurricane Irene was photographed from onboard the International Space station at 19:14:14 GMT on Aug. 24, 20ll. The image, captured with the aid of a 70?mm lens, reveals the eye at center frame.

  11. CEBAS - MS Anderson works with three middeck payloads

    NASA Image and Video Library

    1998-03-03

    S89-E-5204 (25 Jan 1998) --- This Electronic Still Camera (ESC) image shows astronaut Michael P. Anderson, mission specialist, checking the Biotechnology Refrigerator (BTR) while transferring logistics, onboard the Space Shuttle Endeavour. This ESC view was taken on January 25, 1998, at 18:54:53 GMT.

  12. MS Anderson works with three middeck payloads

    NASA Image and Video Library

    1998-03-03

    S89-E-5207 (25 Jan 1998) --- This Electronic Still Camera (ESC) image shows astronaut Michael P. Anderson, mission specialist, checking the Biotechnology Refrigerator (BTR) while transferring logistics onboard the Space Shuttle Endeavour. This ESC view was taken on January 25, 1998, at 18:56:29 GMT.

  13. View in the Node 1/Unity module after docking

    NASA Image and Video Library

    1998-12-10

    S88-E-5111 (12-10-98) --- Astronaut Robert D. Cabana, mission commander, totes a notebook while checking on the progress of readiness tasks onboard the Unity connecting module. The photo was taken with an electronic still camera (ESC) at 20:25:57 GMT, Dec. 10.

  14. Pilot Rick Husband in Node 1/Unity module with checklist

    NASA Image and Video Library

    2017-04-20

    S96-E-5081 (31 May 1999) --- Astronaut Rick D. Husband, pilot, looks over a checklist of tasks to be performed inside Unity on Flight Day 5. The photo was recorded with an electronic still camera (ESC) at 01:54:45 GMT, May 31, 1999.

  15. MS Dunbar exercises on an ergometer

    NASA Image and Video Library

    1998-03-03

    S89-E-5202 (25 Jan 1998) --- This Electronic Still Camera (ESC) image shows mission specialist, Bonnie J. Dunbar, payload commander, working out on the bicycle ergometer onboard the Earth-orbiting Space Shuttle Endeavour. This ESC view was taken on January 25, 1998, at 18:36:52 GMT.

  16. Korean Affairs Report.

    DTIC Science & Technology

    1986-07-18

    a football ground, a 400-meter track, a jumping pit, training grounds for various events and gymnastic rooms. The tiers of seats are roofed with a...also at the airport. [Text] [Pyongyang KCNA in English 1054 GMT 21 Jun 86 SK] /12913 WPK DELEGATION IN PERU—Pyongyang 23 June (KCNA)— Peruvian

  17. Rick Husband gives thumbs-up from flight deck during rendezvous

    NASA Image and Video Library

    2017-04-20

    S96-E-5037 (29 May 1999) --- Astronaut Rick D. Husband, pilot, signals with thumbs up during Discovery's rendezvous operations with the International Space Station (ISS). The photo was taken with an electronic still camera (ESC) at 03:34:23 GMT, May 29, 1999.

  18. Lack of immunity against rubella among Italian young adults.

    PubMed

    Gallone, Maria Serena; Gallone, Maria Filomena; Larocca, Angela Maria Vittoria; Germinario, Cinzia; Tafuri, Silvio

    2017-03-07

    To support the evaluation of the 2010-15 National Plan for Measles and Congenital Rubella Elimination, the authors designed and performed a serosurveillance survey to verify the immunity/susceptibility rate against rubella among Apulian young adults. The study was carried out from May 2011 to June 2012 in the Department of Transfusion Medicine/Blood Bank of Policlinico General Hospital in Bari. Subjects were enrolled by a convenience sampling. For each enrolled patient a 5 ml serum sample was collected and tested for anti-rubella IgG. The geometrical means (GMT) of anti-rubella IgG was calculated. T student test or ANOVA test, when appropriate, was used to compare the means of age per gender and GMT of anti-rubella IgG titres per age classes. Chi-square test was used to compare the proportion of anti-rubella IgG positive subjects per gender and per age classes. For all tests, a p value <0.05 was considered as significant. At the end of the study 1764 subjects were enrolled, 1362 (77.2%) of which were male. The mean age was 38.4 ± 11.7 years (range: 17-65). 86.7% (95% CI = 85.0-88.2) had a positive titre of anti-rubella IgG. GMT of anti-rubella IgG titre was 4.3. The proportion of positive subjects was of 76.8% (n = 279/363; 95% CI = 72.2-81.1) in persons aged 18-26 years; 88.1% (n = 310/352; 95% CI = 84.2-91.3) in 27-35 year-old people; 88.5% (n = 464/524; 95% CI = 85.5-91.1) in 36-45 year-old people; 90.7% (n = 350/386; 95% CI = 87.3-93.4) among people aged 46-55 years and 90.6% (n = 126/139; 95% CI = 84.5-94.9) in 55-65 year-old people (Chi-square = 39.7; p < 0.0001). GMT of anti-rubella IgG titre was 4.3 (4.3 in male and 4.2 in female, t = 2.2; p = 0.03) and seems to differ dividing the enrolled subjects by age group (F = 14.3; p < 0.0001). According to our data, too many women of child-bearing age are still unprotected from rubella in the elimination era and in this scenario the public health efforts should be oriented to catch-up activities.

  19. Immunogenicity and safety of the candidate RTS,S/AS01 vaccine in young Nigerian children: a randomized, double-blind, lot-to-lot consistency trial.

    PubMed

    Umeh, Rich; Oguche, Stephen; Oguonu, Tagbo; Pitmang, Simon; Shu, Elvis; Onyia, Jude-Tony; Daniyam, Comfort A; Shwe, David; Ahmad, Abdullahi; Jongert, Erik; Catteau, Grégory; Lievens, Marc; Ofori-Anyinam, Opokua; Leach, Amanda

    2014-11-12

    For regulatory approval, consistency in manufacturing of vaccine lots is expected to be demonstrated in confirmatory immunogenicity studies using two-sided equivalence trials. This randomized, double-blind study (NCT01323972) assessed consistency of three RTS,S/AS01 malaria vaccine batches formulated from commercial-scale purified antigen bulk lots in terms of anti-CS-responses induced. Healthy children aged 5-17 months were randomized (1:1:1:1) to receive RTS,S/AS01 at 0-1-2 months from one of three commercial-scale purified antigen bulk lots (1600 litres-fermentation scale; commercial-scale lots), or a comparator vaccine batch made from pilot-scale purified antigen bulk lot (20 litres-fermentation scale; pilot-scale lot). The co-primary objectives were to first demonstrate consistency of antibody responses against circumsporozoite (CS) protein at one month post-dose 3 for the three commercial-scale lots and second demonstrate non-inferiority of anti-CS antibody responses at one month post-dose 3 for the commercial-scale lots compared to the pilot-scale lot. Safety and reactogenicity were evaluated as secondary endpoints. One month post-dose-3, anti-CS antibody geometric mean titres (GMT) for the 3 commercial scale lots were 319.6 EU/ml (95% confidence interval (CI): 268.9-379.8), 241.4 EU/ml (207.6-280.7), and 302.3 EU/ml (259.4-352.3). Consistency for the RTS,S/AS01 commercial-scale lots was demonstrated as the two-sided 95% CI of the anti-CS antibody GMT ratio between each pair of lots was within the range of 0.5-2.0. GMT of the pooled commercial-scale lots (285.8 EU/ml (260.7-313.3)) was non-inferior to the pilot-scale lot (271.7 EU/ml (228.5-323.1)). Each RTS,S/AS01 lot had an acceptable tolerability profile, with infrequent reports of grade 3 solicited symptoms. No safety signals were identified and no serious adverse events were considered related to vaccination. RTS,S/AS01 lots formulated from commercial-scale purified antigen bulk batches induced a consistent anti-CS antibody response, and the anti-CS GMT of pooled commercial-scale lots was non-inferior to that of a lot formulated from a pilot-scale antigen bulk batch. Copyright © 2014 The Authors. Published by Elsevier Ltd.. All rights reserved.

  20. Engineering With Nature Geographic Project Mapping Tool (EWN ProMap)

    DTIC Science & Technology

    2015-07-01

    EWN ProMap database provides numerous case studies for infrastructure projects such as breakwaters, river engineering dikes, and seawalls that have...the EWN Project Mapping Tool (EWN ProMap) is to assist users in their search for case study information that can be valuable for developing EWN ideas...Essential elements of EWN include: (1) using science and engineering to produce operational efficiencies supporting sustainable delivery of

  1. Using Generalizability Theory to Examine Different Concept Map Scoring Methods

    ERIC Educational Resources Information Center

    Cetin, Bayram; Guler, Nese; Sarica, Rabia

    2016-01-01

    Problem Statement: In addition to being teaching tools, concept maps can be used as effective assessment tools. The use of concept maps for assessment has raised the issue of scoring them. Concept maps generated and used in different ways can be scored via various methods. Holistic and relational scoring methods are two of them. Purpose of the…

  2. Development of a Competency Mapping Tool for Undergraduate Professional Degree Programmes, Using Mechanical Engineering as a Case Study

    ERIC Educational Resources Information Center

    Holmes, David W.; Sheehan, Madoc; Birks, Melanie; Smithson, John

    2018-01-01

    Mapping the curriculum of a professional degree to the associated competency standard ensures graduates have the competence to perform as professionals. Existing approaches to competence mapping vary greatly in depth, complexity, and effectiveness, and a standardised approach remains elusive. This paper describes a new mapping software tool that…

  3. An Experiment in Mind-Mapping and Argument-Mapping: Tools for Assessing Outcomes in the Business Curriculum

    ERIC Educational Resources Information Center

    Gargouri, Chanaz; Naatus, Mary Kate

    2017-01-01

    Distinguished from other teaching-learning tools, such as mind and concept mapping in which students draw pictures and concepts and show relationships and correlation between them to demonstrate their own understanding of complex concepts, argument mapping is used to demonstrate clarity of reasoning, based on supporting evidence, and come to a…

  4. Teachers' Perceptions of Esri Story Maps as Effective Teaching Tools

    ERIC Educational Resources Information Center

    Strachan, Caitlin; Mitchell, Jerry

    2014-01-01

    The current study explores teachers' perceptions of Esri Story Maps as effective teaching tools. Story Maps are a relatively new web application created using Esri's cloud-based GIS platform, ArcGIS Online. They combine digitized, dynamic web maps with other story elements to help the creator effectively convey a message. The relative ease…

  5. Problem-solving tools for analyzing system problems. The affinity map and the relationship diagram.

    PubMed

    Lepley, C J

    1998-12-01

    The author describes how to use two management tools, an affinity map and a relationship diagram, to define and analyze aspects of a complex problem in a system. The affinity map identifies the key influencing elements of the problem, whereas the relationship diagram helps to identify the area that is the most important element of the issue. Managers can use the tools to draw a map of problem drivers, graphically display the drivers in a diagram, and use the diagram to develop a cause-and-effect relationship.

  6. Tools for model-building with cryo-EM maps

    DOE PAGES

    Terwilliger, Thomas Charles

    2018-01-01

    There are new tools available to you in Phenix for interpreting cryo-EM maps. You can automatically sharpen (or blur) a map with phenix.auto_sharpen and you can segment a map with phenix.segment_and_split_map. If you have overlapping partial models for a map, you can merge them with phenix.combine_models. If you have a protein-RNA complex and protein chains have been accidentally built in the RNA region, you can try to remove them with phenix.remove_poor_fragments. You can put these together and automatically sharpen, segment and build a map with phenix.map_to_model.

  7. Tools for model-building with cryo-EM maps

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Terwilliger, Thomas Charles

    There are new tools available to you in Phenix for interpreting cryo-EM maps. You can automatically sharpen (or blur) a map with phenix.auto_sharpen and you can segment a map with phenix.segment_and_split_map. If you have overlapping partial models for a map, you can merge them with phenix.combine_models. If you have a protein-RNA complex and protein chains have been accidentally built in the RNA region, you can try to remove them with phenix.remove_poor_fragments. You can put these together and automatically sharpen, segment and build a map with phenix.map_to_model.

  8. ATV-4 approach to ISS

    NASA Image and Video Library

    2013-06-15

    ISS036-E-008169 (15 June 2013) --- The European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” approaches the International Space Station. The spacecraft went on to successfully dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  9. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007858 (15 June 2013) --- The European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” approaches the International Space Station. The spacecraft went on to successfully dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  10. ATV-4 approach to ISS

    NASA Image and Video Library

    2013-06-15

    ISS036-E-008170 (15 June 2013) --- The European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” approaches the International Space Station. The spacecraft went on to successfully dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  11. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007856 (15 June 2013) --- The European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” approaches the International Space Station. The spacecraft went on to successfully dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  12. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007864 (15 June 2013) --- As seen from a window in the Pirs module, the European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” is about to dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  13. Results of the 2003 Pregnancy and Parenthood Survey

    DTIC Science & Technology

    2005-08-01

    survey indicate that the knowledge of emergency contraception is increasing in the Navy, and most men and women have had training about birth control , sexually...Family Care Program compliance assessment. 4. Improve General Military Training (GMT) to increase awareness (e.g., birth control , unplanned...27 Birth Control ................................................................................................................................28

  14. Ross during EVA 2

    NASA Image and Video Library

    1998-12-09

    S88-E-5093 (12-09-98) --- Astronaut Jerry L. Ross, mission specialist, requires artificial light to work during the second STS-88 space walk. Part of a pressurized mating adapter (PMA) is in the foreground. The photo was taken with an electronic still camera (ESC) at 23:49:36 GMT, Dec. 9.

  15. Low Temperature Structure and Properties of Graphite Lamellar Compounds.

    DTIC Science & Technology

    1984-01-01

    IV.RESULTS ACCEPTOR COMPOUNDS IV.1. Compound Syntheses All compounds were prepared by directly reacting the halide vapour with pyrographite (HOPG) in the...1983 "Caractdrisation chimique et struc- turale des compos~s graphite-trichlorure de gallium Synth. Met. 7, 125. Onn D.G., Foley G.M.T. & Fischer

  16. Ellen Ochoa and Valeri Tokarev prepare for Node 1/Unity ingress

    NASA Image and Video Library

    2017-04-20

    S96-E-5002 (29 MAY 1999) --- With the aid of a lamp, cosmonaut Valery Tokarev and astronaut Ellen Ochoa participate in the activation of SPACEHAB on Flight Day 2. The photo was recorded with an electronic still camera (ESC) at 07:18:06 GMT, May 29, 1999.

  17. Robinson on aft flight deck

    NASA Image and Video Library

    1998-10-30

    STS095-E-5065 (30 Oct. 1998) --- Astronaut Stephen K. Robinson, STS-95 mission specialist, looks toward Earth in this electronic still camera's (ESC) image of Flight Day two activity aboard the Space Shuttle Discovery. The scene was recorded on the aft flight deck at 12:02:11 GMT, Oct. 30.

  18. Brown at aft flight deck control during SPARTAN capture

    NASA Image and Video Library

    1998-11-03

    STS095-E-5134 (3 Nov. 1998) --- Astronaut Curtis L. Brown, STS-95 commander, on Discovery's aft flight deck during operations to retrieve the free-flying Spartan 201-05 satellite. The photograph was taken with an electronic still camera (ESC) at 3:17:38 GMT, Nov. 3.

  19. Krikalev on the aft flight deck with laptop computers

    NASA Image and Video Library

    1998-12-10

    S88-E-5107 (12-11-98) --- Sergei Krikalev, mission specialist representing the Russian Space Agency (RSA), surrounded by monitors and computers on the flight deck, holds a large camera lens. The photo was taken with an electronic still camera (ESC) at 09:33:22 GMT, Dec. 11.

  20. Marianas Islands seen during STS-103 mission

    NASA Image and Video Library

    1999-12-24

    S103-E-5361 (24 December 1999) --- This vertical view from the Space Shuttle Discovery shows two small islands of the Marianas Islands (Saipan and Tinian) in Micronesia in the Pacific Ocean. The STS-103 crew recorded this electronic still image at 28:05:53 GMT, December 24, 1999.

  1. Korean Affairs Report.

    DTIC Science & Technology

    1985-06-13

    William Cespedes; San Jose Radio Reloj , 22 May 85) 49 Briefs IOC Meeting in Lausanne 51 FOREIGN TRADE Reportage on Trade With Japan (YONHAP, 21...San Jose Radio Reloj in Spanish 1210 GMT 22 May 85 [Report by William Cespedes from Seoul, ROK—live or recorded] [Text] At a news conference at the

  2. Curtain Time 20:00 GMT: Experiments in Virtual Theater on Internet Relay Chat.

    ERIC Educational Resources Information Center

    Danet, Brenda; And Others

    1995-01-01

    Analyzes the substantive and stylistic features of the "Hamnet" script (an 80-line parody of "Hamlet") as performed on Internet Relay Chat. Explicates the logistics of virtual production. Finds evidence for the democratization and globalization of culture in Hamnet productions. Suggests that Hamnet activities appeal primarily…

  3. The Small Body Mapping Tool (SBMT) for Accessing, Visualizing, and Analyzing Spacecraft Data in Three Dimensions

    NASA Astrophysics Data System (ADS)

    Barnouin, O. S.; Ernst, C. M.; Daly, R. T.

    2018-04-01

    The free, publicly available Small Body Mapping Tool (SBMT) developed at the Johns Hopkins University Applied Physics Laboratory is a powerful, easy-to-use tool for accessing and analyzing data from small bodies.

  4. The Synthesis Map Is a Multidimensional Educational Tool That Provides Insight into Students' Mental Models and Promotes Students' Synthetic Knowledge Generation

    ERIC Educational Resources Information Center

    Ortega, Ryan A.; Brame, Cynthia J.

    2015-01-01

    Concept mapping was developed as a method of displaying and organizing hierarchical knowledge structures. Using the new, multidimensional presentation software Prezi, we have developed a new teaching technique designed to engage higher-level skills in the cognitive domain. This tool, synthesis mapping, is a natural evolution of concept mapping,…

  5. Tools for developing a quality management program: proactive tools (process mapping, value stream mapping, fault tree analysis, and failure mode and effects analysis).

    PubMed

    Rath, Frank

    2008-01-01

    This article examines the concepts of quality management (QM) and quality assurance (QA), as well as the current state of QM and QA practices in radiotherapy. A systematic approach incorporating a series of industrial engineering-based tools is proposed, which can be applied in health care organizations proactively to improve process outcomes, reduce risk and/or improve patient safety, improve through-put, and reduce cost. This tool set includes process mapping and process flowcharting, failure modes and effects analysis (FMEA), value stream mapping, and fault tree analysis (FTA). Many health care organizations do not have experience in applying these tools and therefore do not understand how and when to use them. As a result there are many misconceptions about how to use these tools, and they are often incorrectly applied. This article describes these industrial engineering-based tools and also how to use them, when they should be used (and not used), and the intended purposes for their use. In addition the strengths and weaknesses of each of these tools are described, and examples are given to demonstrate the application of these tools in health care settings.

  6. Body Mapping as a Youth Sexual Health Intervention and Data Collection Tool.

    PubMed

    Lys, Candice; Gesink, Dionne; Strike, Carol; Larkin, June

    2018-06-01

    In this article, we describe and evaluate body mapping as (a) an arts-based activity within Fostering Open eXpression Among Youth (FOXY), an educational intervention targeting Northwest Territories (NWT) youth, and (b) a research data collection tool. Data included individual interviews with 41 female participants (aged 13-17 years) who attended FOXY body mapping workshops in six communities in 2013, field notes taken by the researcher during the workshops and interviews, and written reflections from seven FOXY facilitators on the body mapping process (from 2013 to 2016). Thematic analysis explored the utility of body mapping using a developmental evaluation methodology. The results show body mapping is an intervention tool that supports and encourages participant self-reflection, introspection, personal connectedness, and processing difficult emotions. Body mapping is also a data collection catalyst that enables trust and youth voice in research, reduces verbal communication barriers, and facilitates the collection of rich data regarding personal experiences.

  7. PFGE MAPPER and PFGE READER: two tools to aid in the analysis and data input of pulse field gel electrophoresis maps.

    PubMed Central

    Shifman, M. A.; Nadkarni, P.; Miller, P. L.

    1992-01-01

    Pulse field gel electrophoresis mapping is an important technique for characterizing large segments of DNA. We have developed two tools to aid in the construction of pulse field electrophoresis gel maps: PFGE READER which stores experimental conditions and calculates fragment sizes and PFGE MAPPER which constructs pulse field gel electrophoresis maps. PMID:1482898

  8. Battle of France WWII

    NASA Astrophysics Data System (ADS)

    Gadhath, Arpitha Rao

    The purpose of this thesis is to build an interactive Geographical Information System (GIS) tool, relating to the series of events that occurred during the Battle of France World War II. The tool gives us an insight about the countries involved in the battle, their allies and their strategies. This tool was created to use it as a one stop source of information regarding all the important battles that took place, which lead to the fall of France. The tool brings together the maps of all the countries involved. Integrated with each map is the data relevant to that map. The data for each country includes the place of attack, the strategies used during the attack, and the kind of warfare. The tool also makes use of HTML files to give all the information, along with the images from the time of the war and a footage which explains everything about the particular battle. The tool was build using JAVA, along with the use of MOJO (Map Objects Java Objects) to develop Maps of each of the countries. MOJO is developed by ESRI (Environmental Science Research Institute) which makes it easier to add data to the maps. It also makes highlighting important information easier making use of pop-up windows, charts and infographics. HTML files were designed making use of the open-source template developed by Bootstrap. The tool is built in such a way that the interface is simple and easy for the user to use and understand.

  9. Analysis of Seismotektonic Patterns in Sumatra Region Based on the Focal Mechanism of Earthquake Period 1976-2016

    NASA Astrophysics Data System (ADS)

    Indah, F. P.; Syafriani, S.; Andiyansyah, Z. S.

    2018-04-01

    Sumatra is in an active subduction zone between the indo-australian plate and the eurasian plate and is located at a fault along the sumatra fault so that sumatra is vulnerable to earthquakes. One of the ways to find out the cause of earthquake can be done by identifying the type of earthquake-causing faults based on earthquake of focal mechanism. The data used to identify the type of fault cause of earthquake is the earth tensor moment data which is sourced from global cmt period 1976-2016. The data used in this research using magnitude m ≥ 6 sr. This research uses gmt software (generic mapping tolls) to describe the form of fault. From the research result, it is found that the characteristics of fault field that formed in every region in sumatera island based on data processing and data of earthquake history of 1976-2016 period that the type of fault in sumatera fault is strike slip, fault type in mentawai fault is reverse fault (rising faults) and dip-slip, while the fault type in the subduction zone is dip-slip.

  10. Evidence-Based Concept Mapping for the Athletic Training Student

    ERIC Educational Resources Information Center

    Speicher, Timothy E.; Martin, Malissa; Zigmont, Jason

    2013-01-01

    Context: A concept map is a graphical and cognitive tool that enables learners to link together interrelated concepts using propositions or statements that answer a posed problem. As an assessment tool, concept mapping reveals a learner's research skill proficiency and cognitive processing. Background: The identification and organization of the…

  11. Are you ready for Mars? - Main media events surrounding the arrival of ESA's Mars Express at Mars

    NASA Astrophysics Data System (ADS)

    2003-11-01

    Launched on 2 June 2003 from Baikonur (Kazakhstan) on board a Russian Soyuz launcher operated by Starsem, the European probe -built for ESA by a European team of industrial companies led by Astrium - carries seven scientific instruments that will perform a series of remote-sensing experiments designed to shed new light on the Martian atmosphere, the planet’s structure and its geology. In particular, the British-made Beagle 2 lander, named after the ship on which Charles Darwin explored uncharted areas of the Earth in 1830, will contribute to the search for traces of life on Mars through exobiology experiments and geochemistry research. On Christmas Eve the Mars Express orbiter will be steered on a course taking it into an elliptical orbit, where it will safely circle the planet for a minimum of almost 2 Earth years. The Beagle 2 lander - which will have been released from the mother craft a few days earlier (on 19 December) - instead will stay on a collision course with the planet. It too should also be safe, being designed for atmospheric entry and geared for a final soft landing due to a sophisticated system of parachutes and airbags. On arrival, the Mars Express mission control team will report on the outcome of the spacecraft's delicate orbital insertion manoeuvre. It will take some time for Mars Express to manouvre into position to pick communications from Beagle 2. Hence, initially, other means will be used to check that Beagle 2 has landed: first signals from the Beagle 2 landing are expected to be available throughout Christmas Day, either through pick-up and relay of Beagle 2 radio signals by NASA’s Mars Odyssey, or by direct pick-up by the Jodrell Bank radio telescope in the UK. Mars Express will then pass over Beagle 2 in early January 2004, relaying data and images back to Earth. The first images from the cameras of Beagle 2 and Mars Express are expected to be available between the end of the year and the beginning of January 2004. The key dates relating to the arrival of Mars Express at its destination will be marked by several media events not to be missed. Pencil them into your diaries so as not to miss one of the most exciting events of the year. Tuesday 11 November Mars Express/Beagle 2 Media briefing Royal Society- 6-9 Carlton House Terrace, London 10:00 - 13:00 -Status report on the mission -Technical details on forthcoming Mars Express/Beagle 2 operations -News handling arrangements around Christmas Speakers: Prof. David Southwood, ESA Director of Science; Prof. Colin Pillinger, Beagle 2 Lander Lead Scientist; John Reddy, ESA Mars Express Principal Electrical Systems Engineer. Contact: Peter Barratt, PPARC Tel. + 44 (0) 1793 44 20 25 e-mail: Beagle2@pparc.ac.uk Wednesday 3 December ESA Media briefing ESA/ ESOC, Darmstadt, Germany 10:30 - 12:30 -Scientific outlook and expected results -Status report on the mission -Presentation of upcoming events Speakers: Rudolf Schmidt, ESA Mars Express Project Manager; Augustin Chicarro, ESA Mars Express Project Scientist. In addition, Mars Express scientists and Mission Control Managers will highlight their contribution to the Mars Express mission. In videoconference with ESA/Headquarters, Paris (F); ESA/ESTEC, Noordwijk (NL), ESA/ESRIN, Frascati (I). Contact: Jocelyne Landeau Constantin, ESA/ESOC Tel. + 49 6151 90 26 96 e-mail: Jocelyne.Landeau-Constantin@esa.int Friday 19 December Mars Express Orbiter/ Beagle 2 separation Mission Control Managers announce results of Beagle 2 separation from the mother craft. a.Event at ESA/ESOC, Darmstadt , Germany 08:30 - 14:00 Speakers: Prof. David Southwood, ESA Director of Science; Rudolf Schmidt, ESA Mars Express Project Manager Contact: Jocelyne Landeau Constantin, ESA/ESOC Tel. + 49 6151 90 26 96 e-mail: Jocelyne.Landeau-Constantin@esa.int b.Event in London -location and time t.b.c. Speaker: Prof. Colin Pillinger, Beagle 2 Lander Lead Scientist. Contact: Peter Barratt, PPARC Tel. + 44 (0) 1793 44 20 25 e-mail: Beagle2@pparc.ac.uk Thursday 25 December Christmas on Mars a.Media event at ESA/ ESOC, Darmstadt, Germany 03:00 - 07:00 Mars Express orbit insertion follow-up and Beagle 2 landing- Experience the accomplishment of one of the most exciting phases of the Mars Express mission in real time in the presence of Mission Control Managers and Scientists. 08:30 - 10:00 Christmas media brunch- Announcement of Mars orbit insertion results and Beagle 2 landing, with the participation of Prof. David Sourthwood, ESA Director of Science. Contact: Jocelyne Landeau Constantin, ESA/ESOC Tel. + 49 6151 90 26 96 e-mail: Jocelyne.Landeau-Constantin@esa.int b.Event in central London - location and time t.b.c. Contact: Peter Barratt, PPARC Tel. + 44 (0) 1793 44 20 25 e-mail: Beagle2@pparc.ac.uk Note to Editors: Timeline of expected main mission events 16 December All day Fine targeting of Mars Express to point at landing site - ranging 19 December 06:51 GMT/07:51 CET Decision to release Beagle 2 08:41 GMT/09:41 CET Eject command sent to Mars Express 10:15 GMT/11:15 CET First results of release available 20 December Re-targeting of Mars Express on an orbital insertion course 23 December Update on Mars Express Orbital Insertion Sequence 24 December Night Final decision to steer Mars Express into a Martian orbit 25 December 02:45 GMT/03:45 CET Beagle 2 landing on Mars 03:00 GMT/04:00 CET Mars Express Orbital Insertion 05:15 GMT/06:15 CET Mars Odyssey orbiter flight over Beagle 2 07:00 GMT/08:00 CET First evaluation of Mars Express orbital insertion 22:45 GMT/23:45 CET Possible direct capture of Beagle 2 signals at Jodrell Bank (UK)

  12. iPads at Field Camp: A First Test of the Challenges and Opportunities

    NASA Astrophysics Data System (ADS)

    Hurst, S. D.; Stewart, M. A.

    2011-12-01

    An iPad 2 was given to approximately half of the University of Illinois students attending the Wasatch-Uinta Field Camp (WUFC) in summer 2011. The iPads were provisioned with orientation measuring, mapping and location software. The software would automatically transfer an orientation measurement to the current location on the Google Maps application, and was able to output a full list of orientation data. Students also had normal access to more traditional mapping tools such as Brunton compasses and GPS units and were required to map with these tools along with other students of WUFC not provided iPads. Compared to traditional tools, iPads have drawbacks such as increased weight, break-ability, need for power source and wireless connectivity; in sum, they need a substantial infrastructure that reduces range, availability, and probably most importantly, convenience. Some of these drawbacks inhibited adoption by our students, the primary reasons being the added weight and the inability to map directly to a GIS application with detailed topographic maps equivalent to the physical topographic map sheets used at WUFC. In their favor, the iPads combine a host of tools into one, including software that can measure orientation in a fashion more intuitively than a Brunton. They also allow storage, editing and analysis of data, notes (spoken and/or written) and potentially unlimited access to a variety of maps. Via a post-field camp survey of the University of Illinois students at WUFC, we have identified some of the important issues that need to be addressed before portable tablets like the iPad become the tool of choice for general field work. Some problems are intrinsic to almost any advanced technology, some are artifacts of the current generations of hardware and software available for these devices. Technical drawbacks aside, the adoption of iPads was further inhibited primarily by inexperience with their use as a mapping tool and secondarily by their redundancy with traditional tools. We are addressing some aspects of software limitations and future technology improvements by the industry will naturally reduce other limitations. We will continue testing iPads during field trips and courses for the foreseeable future. As we begin to deal with these limitations and students become more accustomed to their use in the field, we expect our students to more fully embrace iPads as a convenient field and mapping tool.

  13. Coproducing Aboriginal patient journey mapping tools for improved quality and coordination of care.

    PubMed

    Kelly, Janet; Dwyer, Judith; Mackean, Tamara; O'Donnell, Kim; Willis, Eileen

    2016-12-08

    This paper describes the rationale and process for developing a set of Aboriginal patient journey mapping tools with Aboriginal patients, health professionals, support workers, educators and researchers in the Managing Two Worlds Together project between 2008 and 2015. Aboriginal patients and their families from rural and remote areas, and healthcare providers in urban, rural and remote settings, shared their perceptions of the barriers and enablers to quality care in interviews and focus groups, and individual patient journey case studies were documented. Data were thematically analysed. In the absence of suitable existing tools, a new analytical framework and mapping approach was developed. The utility of the tools in other settings was then tested with health professionals, and the tools were further modified for use in quality improvement in health and education settings in South Australia and the Northern Territory. A central set of patient journey mapping tools with flexible adaptations, a workbook, and five sets of case studies describing how staff adapted and used the tools at different sites are available for wider use.

  14. Facilitating participatory multilevel decision-making by using interactive mental maps.

    PubMed

    Pfeiffer, Constanze; Glaser, Stephanie; Vencatesan, Jayshree; Schliermann-Kraus, Elke; Drescher, Axel; Glaser, Rüdiger

    2008-11-01

    Participation of citizens in political, economic or social decisions is increasingly recognized as a precondition to foster sustainable development processes. Since spatial information is often important during planning and decision making, participatory mapping gains in popularity. However, little attention has been paid to the fact that information must be presented in a useful way to reach city planners and policy makers. Above all, the importance of visualisation tools to support collaboration, analytical reasoning, problem solving and decision-making in analysing and planning processes has been underestimated. In this paper, we describe how an interactive mental map tool has been developed in a highly interdisciplinary disaster management project in Chennai, India. We moved from a hand drawn mental maps approach to an interactive mental map tool. This was achieved by merging socio-economic and geospatial data on infrastructure, local perceptions, coping and adaptation strategies with remote sensing data and modern technology of map making. This newly developed interactive mapping tool allowed for insights into different locally-constructed realities and facilitated the communication of results to the wider public and respective policy makers. It proved to be useful in visualising information and promoting participatory decision-making processes. We argue that the tool bears potential also for health research projects. The interactive mental map can be used to spatially and temporally assess key health themes such as availability of, and accessibility to, existing health care services, breeding sites of disease vectors, collection and storage of water, waste disposal, location of public toilets or defecation sites.

  15. Office of the Under Secretary of Defense for Personnel and Readiness

    Science.gov Websites

    Mattis, Danish Defense Minister Reaffirm Defense Relationship Fri, 25 May 2018 19:25:00 GMT Trump Thanks Deputy Secretary of Defense for Total Force Management as it relates to readiness; National Guard and Reserve component affairs; health affairs; training; and personnel requirements and management, including

  16. STS-54 Pilot McMonagle talks to radio station from OV-105's aft flight deck

    NASA Image and Video Library

    1993-01-15

    STS054-S-012 (15 Jan 1993) --- McMonagle talks to a radio station from the flight deck of Endeavour while, in the background, several crewmates await their turns to communicate with other stations. The scene was recorded at 13:54:14:13 GMT, Jan. 15, 1993.

  17. STS-54 MS1 Runco talks to radio station from OV-105's aft flight deck

    NASA Image and Video Library

    1993-01-15

    STS054-S-014 (15 Jan 1993) --- Runco talks to a radio station from the flight deck of Endeavour while, in the background, several crewmates await their turns to communicate with other stations. The scene was recorded at 13:48:45:11 GMT, Jan. 15, 1993.

  18. STS-54 Commander Casper talks to radio station from OV-105's aft flight deck

    NASA Image and Video Library

    1993-01-15

    STS054-S-015 (15 Jan 1993) --- Casper talks to a radio station from the flight deck of Endeavour while, in the background, Runco, left, and Harbaugh await their turns to communicate with other stations. The scene was recorded at 13:45:54:05 GMT, Jan. 15, 1993.

  19. STS-54 MS2 Harbaugh talks to radio station from OV-105's aft flight deck

    NASA Image and Video Library

    1993-01-15

    STS054-S-013 (15 Jan 1993) --- Harbaugh talks to a radio station from the flight deck of Endeavour while, in the background, several crewmates await their turns to communicate with other stations. The scene was recorded at 13:57:20:20 GMT, Jan. 15, 1993.

  20. Station Climatic Summaries, Europe

    DTIC Science & Technology

    1989-01-01

    ICAO ID: BIHN LOCATION: 64118’N, 15󈧑’W ELEVATION (FEET): 30 LST = GMT: +1 PREPARED BY: USAFETAC/ECR, OCT 1986 PERIOD: 8007-8512 SOURCE NO. JAN FEB...SUMMARY SrATION: HOFN, ICELAND STATION #: 040820 ICAO ID: BIHN LOCATION: 64018’N, 15013’W ELEVATION (FEET): 30 LST = GT: +1 PREPARED BY: USAFETAC/ECR

  1. Glen and Brown on aft flight deck

    NASA Image and Video Library

    1998-10-31

    STS095-E-5180 (31 Oct. 1998) --- Astronaut Curtis L. Brown Jr. (left), STS-95 commander, stands by on Discovery's aft flight deck as U.S. Sen. John H. Glenn Jr., payload specialist, talks with ground controllers in Houston. The photo was taken with an electronic still camera (ESC) at 00:48:48 GMT, Oct. 31.

  2. Earth view taken by the Expedition 11 crew

    NASA Image and Video Library

    2005-09-14

    ISS011-E-12988 (14 September 2005, 19:16:29 GMT) --- This oblique view of Hurricane Ophelia was taken on the afternoon of September 14 from the International Space Station. The somewhat ill-defined eye is located just above right center. The slow-moving storm is off the coast of the Carolinas.

  3. Earth view taken by the Expedition 11 crew

    NASA Image and Video Library

    2005-09-14

    ISS011-E-12975 (14 September 2005, 19:13:58 GMT) --- This high oblique 80-mm image of Hurricane Ophelia was taken on the afternoon of September 14 from the International Space Station. The ill-defined eye is located at center of the frame. The slow-moving storm is off the coast of the Carolinas.

  4. Earth view taken by the Expedition 11 crew

    NASA Image and Video Library

    2005-09-14

    ISS011-E-12982 (14 September 2005, 19:14:09 GMT) --- This high oblique view of Hurricane Ophelia was taken on the afternoon of September 14 from the International Space Station. The ill-defined eye is located at bottom center of the frame. The slow-moving storm is off the coast of the Carolinas.

  5. Cabana, Newman and Ross in the Node 1/Unity module

    NASA Image and Video Library

    1998-12-10

    S88-E-5124 (12-11-98) --- From the left, astronauts Robert D. Cabana, Jerry L. Ross and James H. Newman are pictured during work to ready the Unity connecting module for its ISS role. The photo was taken with an electronic still camera (ESC) at 00:23:27 GMT, Dec. 11.

  6. Lindsey enters data into laptop in Spacehab

    NASA Image and Video Library

    1998-11-04

    STS095-E-5227 (4 Nov. 1998) --- Astronaut Steven W. Lindsey, STS-95 pilot, has done a 180-degree change of posture from earlier frame as he inputs data on a laptop in Spacehab aboard the Space Shuttle Discovery. The photo was taken with an electronic still camera (ESC) at 03:07:52 GMT, Nov. 4.

  7. RISK COMMUNICATION IN ACTION: THE TOOLS OF MESSAGE MAPPING

    EPA Science Inventory

    Risk Communication in Action: The Tools of Message Mapping, is a workbook designed to guide risk communicators in crisis situations. The first part of this workbook will review general guidelines for risk communication. The second part will focus on one of the most robust tools o...

  8. NASA's participation in the AVE-SESAME '79 program

    NASA Technical Reports Server (NTRS)

    Hill, K.; Turner, R. E.; Wilson, G. S.

    1979-01-01

    NASA's Marshall Space Flight Center participated with its AVE (Atmospheric Variability Experiment) in a large interagency mesoscale and severe storms experiment identified herein as AVE-SESAME '79 (Atmospheric Variability Experiment-Severe Environmental Storms and Mesoscale Experiment 1979). A primary objective of NASA was to support an effort to acquire carefully edited sets of rawinsonde data during selected severe weather events for use in correlative and diagnostic studies with satellite and radar data obtained at approximately the same times. Data were acquired during six individual 24-h experiments on both the regional and storm scales over a network in the central United States that utilized approximately 20 supplemental rawinsonde sites meshed among 23 standard National Weather Service sites. Included among the six experiments are data obtained between 1200 GMT on April 10 and 1200 GMT on April 11, encompassing the formation and development period for the tornado-producing systems that devastated Wichita Falls, Texas, and other sections of Oklahoma and Texas. The other dates for which data sets are available are April 19-20 and 25-26, May 9-10 and 20-21, and June 7-8, 1979.

  9. Rubella antibodies in Australian immunoglobulin products.

    PubMed

    Young, Megan K; Bertolini, Joseph; Kotharu, Pushpa; Maher, Darryl; Cripps, Allan W

    2017-08-03

    Rubella antibodies are not routinely measured in immunoglobulin products and there is a lack of information on the titer in Australian products. To facilitate future studies of the effectiveness of passive immunisation for preventing rubella and congenital rubella syndrome, this study measured the concentration of rubella-specific antibodies in Australian intramuscular (IM) and intravenous (IV) human immunoglobulin products suitable for post-exposure prophylaxis using a chemiluminescent immunoassay. The GMT ± GSD for the IM product was 19 ± 1.2 IU/mg (2980 ± 1.2 IU/mL). The GMT ± GSD for the IV product was 12 ± 1.5 IU/mg (729 ± 1.5 IU/mL). At present, Australian guidelines recommend offering non-immune pregnant women exposed to rubella 20 mL of intramuscular immunoglobulin within 72 hours of exposure. This equates to 42,160 IU of rubella antibodies if the lowest titer obtained for the Australian IM product is considered. The same dose would be delivered by 176 mL of the Australian IV product at the lowest measured rubella-specific antibody titer.

  10. Efficacy of vaccination with La Sota strain vaccine to control Newcastle disease in village chickens in Nepal.

    PubMed

    Shrestha, Sulochana; Dhawan, Mamta; Donadeu, Meritxell; Dungu, Baptiste

    2017-02-01

    The efficacy of vaccination with Newcastle disease (ND) La Sota and R 2 B (Mukteswar) modified live strain vaccines was determined by experimental challenge and with ND La Sota vaccine under field conditions in Nepal. Booster vaccination with ND La Sota vaccine after a primary vaccination with ND La Sota vaccine, induced a geometric mean titre (GMT) of 5.0 log 2 haemagglutination inhibition (HI) units, compared to a GMT of 6.0 log 2 HI units following booster vaccination with R 2 B vaccine 1 month after primary vaccination with ND La Sota vaccine. Both vaccines provided 100% protection against challenge with a local field ND strain. Furthermore, booster vaccination with ND La Sota vaccine induced protective levels of antibody after field use in villages in Jhapa, and no outbreaks of ND occurred during the study period. The ND La Sota modified live vaccine is immunogenic and efficacious and is a suitable vaccine for use in vaccination programmes in village chickens in the rural areas of Nepal.

  11. Development of the fast steering secondary mirror assembly of GMT

    NASA Astrophysics Data System (ADS)

    Lee, Sungho; Cho, Myung K.; Park, Chan; Han, Jeong-Yeol; Jeong, Ueejeong; Yoon, Yang-noh; Song, Je Heon; Park, Byeong-Gon; Dribusch, Christoph; Park, Won Hyun; Jun, Youra; Yang, Ho-Soon; Moon, Il-Kwon; Oh, Chang Jin; Kim, Ho-Sang; Lee, Kyoung-Don; Bernier, Robert; Alongi, Chris; Rakich, Andrew; Gardner, Paul; Dettmann, Lee; Rosenthal, Wylie

    2016-07-01

    The Giant Magellan Telescope (GMT) will be featured with two Gregorian secondary mirrors, an adaptive secondary mirror (ASM) and a fast-steering secondary mirror (FSM). The FSM has an effective diameter of 3.2 m and built as seven 1.1 m diameter circular segments, which are conjugated 1:1 to the seven 8.4m segments of the primary. Each FSM segment contains a tip-tilt capability for fine co-alignment of the telescope sub-apertures and fast guiding to attenuate telescope wind shake and mount control jitter. This tip-tilt capability thus enhances performance of the telescope in the seeing limited observation mode. As the first stage of the FSM development, Phase 0 study was conducted to develop a program plan detailing the design and manufacturing process for the seven FSM segments. The FSM development plan has been matured through an internal review by the GMTO-KASI team in May 2016 and fully assessed by an external review in June 2016. In this paper, we present the technical aspects of the FSM development plan.

  12. The Sulfur Dioxide Plume from the February 26, 2000 Eruption of Mt. Hekla, Iceland

    NASA Technical Reports Server (NTRS)

    Krueger, Arlin J.; Krotkov, N. A.; Einaudi, Franco (Technical Monitor)

    2000-01-01

    The February 2000 fissure eruption of Mt. Hekla, Iceland was captured in sulfur dioxide data from the Earth Probe TOMS. A special algorithm is used to discriminate sulfur dioxide from ozone. The eruption began at 18:19 GMT on February 26, 2000 and was first viewed by TOMS at 09:55 GMT on February 27. The volcanic cloud at that time appeared as a very long and narrow arc extending west from the volcano in southern Iceland, then north across Greenland, and finally east towards Norway. The cloud altitude was reported from aircraft sightings and data to be above 10 km. The circulation of a ridge located north of Iceland produced the large arc shaped cloud. As the eruption is non-explosive the high altitude cloud contains little ash. Almost all the ash from the eruption fell out locally across Iceland. By February 29, the sulfur dioxide cloud had drifted eastward in a band along the Barents Sea coast of Norway and Russia. The analysis includes an assessment of the initial sulfur dioxide content and its rate of conversion to sulfate.

  13. Biosynthesis of the fungal cell wall polysaccharide galactomannan requires intraluminal GDP-mannose.

    PubMed

    Engel, Jakob; Schmalhorst, Philipp S; Routier, Françoise H

    2012-12-28

    Fungal cell walls frequently contain a polymer of mannose and galactose called galactomannan. In the pathogenic filamentous fungus Aspergillus fumigatus, this polysaccharide is made of a linear mannan backbone with side chains of galactofuran and is anchored to the plasma membrane via a glycosylphosphatidylinositol or is covalently linked to the cell wall. To date, the biosynthesis and significance of this polysaccharide are unknown. The present data demonstrate that deletion of the Golgi UDP-galactofuranose transporter GlfB or the GDP-mannose transporter GmtA leads to the absence of galactofuran or galactomannan, respectively. This indicates that the biosynthesis of galactomannan probably occurs in the lumen of the Golgi apparatus and thus contrasts with the biosynthesis of other fungal cell wall polysaccharides studied to date that takes place at the plasma membrane. Transglycosylation of galactomannan from the membrane to the cell wall is hypothesized because both the cell wall-bound and membrane-bound polysaccharide forms are affected in the generated mutants. Considering the severe growth defect of the A. fumigatus GmtA-deficient mutant, proving this paradigm might provide new targets for antifungal therapy.

  14. Jules Verne Voyager, Jr: An Interactive Map Tool for Teaching Plate Tectonics

    NASA Astrophysics Data System (ADS)

    Hamburger, M. W.; Meertens, C. M.

    2010-12-01

    We present an interactive, web-based map utility that can make new geological and geophysical results accessible to a large number and variety of users. The tool provides a user-friendly interface that allows users to access a variety of maps, satellite images, and geophysical data at a range of spatial scales. The map tool, dubbed 'Jules Verne Voyager, Jr.', allows users to interactively create maps of a variety of study areas around the world. The utility was developed in collaboration with the UNAVCO Consortium for study of global-scale tectonic processes. Users can choose from a variety of base maps (including "Face of the Earth" and "Earth at Night" satellite imagery mosaics, global topography, geoid, sea-floor age, strain rate and seismic hazard maps, and others), add a number of geographic and geophysical overlays (coastlines, political boundaries, rivers and lakes, earthquake and volcano locations, stress axes, etc.), and then superimpose both observed and model velocity vectors representing a compilation of 2933 GPS geodetic measurements from around the world. A remarkable characteristic of the geodetic compilation is that users can select from some 21 plates' frames of reference, allowing a visual representation of both 'absolute' plate motion (in a no-net rotation reference frame) and relative motion along all of the world's plate boundaries. The tool allows users to zoom among at least three map scales. The map tool can be viewed at http://jules.unavco.org/VoyagerJr/Earth. A more detailed version of the map utility, developed in conjunction with the EarthScope initiative, focuses on North America geodynamics, and provides more detailed geophysical and geographic information for the United States, Canada, and Mexico. The ‘EarthScope Voyager’ can be accessed at http://jules.unavco.org/VoyagerJr/EarthScope. Because the system uses pre-constructed gif images and overlays, the system can rapidly create and display maps to a large number of users simultaneously and does not require any special software installation on users' systems. In addition, a javascript-based educational interface, dubbed "Exploring our Dynamic Planet", incorporates the map tool, explanatory material, background scientific material, and curricular activities that encourage users to explore Earth processes using the Jules Verne Voyager, Jr. tool. Exploring our Dynamic Planet can be viewed at http://www.dpc.ucar.edu/VoyagerJr/. Because of its flexibility, the map utilities can be used for hands-on exercises exploring plate interaction in a range of academic settings, from high school science classes to entry-level undergraduate to graduate-level tectonics courses.

  15. National Seabed Mapping Programmes Collaborate to Advance Marine Geomorphological Mapping in Adjoining European Seas

    NASA Astrophysics Data System (ADS)

    Monteys, X.; Guinan, J.; Green, S.; Gafeira, J.; Dove, D.; Baeten, N. J.; Thorsnes, T.

    2017-12-01

    Marine geomorphological mapping is an effective means of characterising and understanding the seabed and its features with direct relevance to; offshore infrastructure placement, benthic habitat mapping, conservation & policy, marine spatial planning, fisheries management and pure research. Advancements in acoustic survey techniques and data processing methods resulting in the availability of high-resolution marine datasets e.g. multibeam echosounder bathymetry and shallow seismic mean that geological interpretations can be greatly improved by combining with geomorphological maps. Since December 2015, representatives from the national seabed mapping programmes of Norway (MAREANO), Ireland (INFOMAR) and the United Kingdom (MAREMAP) have collaborated and established the MIM geomorphology working group) with the common aim of advancing best practice for geological mapping in their adjoining sea areas in north-west Europe. A recently developed two-part classification system for Seabed Geomorphology (`Morphology' and Geomorphology') has been established as a result of an initiative led by the British Geological Survey (BGS) with contributions from the MIM group (Dove et al. 2016). To support the scheme, existing BGS GIS tools (SIGMA) have been adapted to apply this two-part classification system and here we present on the tools effectiveness in mapping geomorphological features, along with progress in harmonising the classification and feature nomenclature. Recognising that manual mapping of seabed features can be time-consuming and subjective, semi-automated approaches for mapping seabed features and improving mapping efficiency is being developed using Arc-GIS based tools. These methods recognise, spatially delineate and morphologically describe seabed features such as pockmarks (Gafeira et al., 2012) and cold-water coral mounds. Such tools utilise multibeam echosounder data or any other bathymetric dataset (e.g. 3D seismic, Geldof et al., 2014) that can produce a depth digital model. The tools have the capability to capture an extensive list of morphological attributes. The MIM geomorphology working group's strategy to develop methods for more efficient marine geomorphological mapping is presented with data examples and case studies showing the latest results.

  16. Assessment and application of national environmental databases and mapping tools at the local level to two community case studies.

    PubMed

    Hammond, Davyda; Conlon, Kathryn; Barzyk, Timothy; Chahine, Teresa; Zartarian, Valerie; Schultz, Brad

    2011-03-01

    Communities are concerned over pollution levels and seek methods to systematically identify and prioritize the environmental stressors in their communities. Geographic information system (GIS) maps of environmental information can be useful tools for communities in their assessment of environmental-pollution-related risks. Databases and mapping tools that supply community-level estimates of ambient concentrations of hazardous pollutants, risk, and potential health impacts can provide relevant information for communities to understand, identify, and prioritize potential exposures and risk from multiple sources. An assessment of existing databases and mapping tools was conducted as part of this study to explore the utility of publicly available databases, and three of these databases were selected for use in a community-level GIS mapping application. Queried data from the U.S. EPA's National-Scale Air Toxics Assessment, Air Quality System, and National Emissions Inventory were mapped at the appropriate spatial and temporal resolutions for identifying risks of exposure to air pollutants in two communities. The maps combine monitored and model-simulated pollutant and health risk estimates, along with local survey results, to assist communities with the identification of potential exposure sources and pollution hot spots. Findings from this case study analysis will provide information to advance the development of new tools to assist communities with environmental risk assessments and hazard prioritization. © 2010 Society for Risk Analysis.

  17. Mapping as a visual health communication tool: promises and dilemmas.

    PubMed

    Parrott, Roxanne; Hopfer, Suellen; Ghetian, Christie; Lengerich, Eugene

    2007-01-01

    In the era of evidence-based public health promotion and planning, the use of maps as a form of evidence to communicate about the multiple determinants of cancer is on the rise. Geographic information systems and mapping technologies make future proliferation of this strategy likely. Yet disease maps as a communication form remain largely unexamined. This content analysis considers the presence of multivariate information, credibility cues, and the communication function of publicly accessible maps for cancer control activities. Thirty-six state comprehensive cancer control plans were publicly available in July 2005 and were reviewed for the presence of maps. Fourteen of the 36 state cancer plans (39%) contained map images (N = 59 static maps). A continuum of map inter activity was observed, with 10 states having interactive mapping tools available to query and map cancer information. Four states had both cancer plans with map images and interactive mapping tools available to the public on their Web sites. Of the 14 state cancer plans that depicted map images, two displayed multivariate data in a single map. Nine of the 10 states with interactive mapping capability offered the option to display multivariate health risk messages. The most frequent content category mapped was cancer incidence and mortality, with stage at diagnosis infrequently available. The most frequent communication function served by the maps reviewed was redundancy, as maps repeated information contained in textual forms. The social and ethical implications for communicating about cancer through the use of visual geographic representations are discussed.

  18. A Map-Based Service Supporting Different Types of Geographic Knowledge for the Public

    PubMed Central

    Zhou, Mengjie; Wang, Rui; Tian, Jing; Ye, Ning; Mai, Shumin

    2016-01-01

    The internet enables the rapid and easy creation, storage, and transfer of knowledge; however, services that transfer geographic knowledge and facilitate the public understanding of geographic knowledge are still underdeveloped to date. Existing online maps (or atlases) can support limited types of geographic knowledge. In this study, we propose a framework for map-based services to represent and transfer different types of geographic knowledge to the public. A map-based service provides tools to ensure the effective transfer of geographic knowledge. We discuss the types of geographic knowledge that should be represented and transferred to the public, and we propose guidelines and a method to represent various types of knowledge through a map-based service. To facilitate the effective transfer of geographic knowledge, tools such as auxiliary background knowledge and auxiliary map-reading tools are provided through interactions with maps. An experiment conducted to illustrate our idea and to evaluate the usefulness of the map-based service is described; the results demonstrate that the map-based service is useful for transferring different types of geographic knowledge. PMID:27045314

  19. A Map-Based Service Supporting Different Types of Geographic Knowledge for the Public.

    PubMed

    Zhou, Mengjie; Wang, Rui; Tian, Jing; Ye, Ning; Mai, Shumin

    2016-01-01

    The internet enables the rapid and easy creation, storage, and transfer of knowledge; however, services that transfer geographic knowledge and facilitate the public understanding of geographic knowledge are still underdeveloped to date. Existing online maps (or atlases) can support limited types of geographic knowledge. In this study, we propose a framework for map-based services to represent and transfer different types of geographic knowledge to the public. A map-based service provides tools to ensure the effective transfer of geographic knowledge. We discuss the types of geographic knowledge that should be represented and transferred to the public, and we propose guidelines and a method to represent various types of knowledge through a map-based service. To facilitate the effective transfer of geographic knowledge, tools such as auxiliary background knowledge and auxiliary map-reading tools are provided through interactions with maps. An experiment conducted to illustrate our idea and to evaluate the usefulness of the map-based service is described; the results demonstrate that the map-based service is useful for transferring different types of geographic knowledge.

  20. Interactive Learning Modules: Enabling Near Real-Time Oceanographic Data Use In Undergraduate Education

    NASA Astrophysics Data System (ADS)

    Kilb, D. L.; Fundis, A. T.; Risien, C. M.

    2012-12-01

    The focus of the Education and Public Engagement (EPE) component of the NSF's Ocean Observatories Initiative (OOI) is to provide a new layer of cyber-interactivity for undergraduate educators to bring near real-time data from the global ocean into learning environments. To accomplish this, we are designing six online services including: 1) visualization tools, 2) a lesson builder, 3) a concept map builder, 4) educational web services (middleware), 5) collaboration tools and 6) an educational resource database. Here, we report on our Fall 2012 release that includes the first four of these services: 1) Interactive visualization tools allow users to interactively select data of interest, display the data in various views (e.g., maps, time-series and scatter plots) and obtain statistical measures such as mean, standard deviation and a regression line fit to select data. Specific visualization tools include a tool to compare different months of data, a time series explorer tool to investigate the temporal evolution of select data parameters (e.g., sea water temperature or salinity), a glider profile tool that displays ocean glider tracks and associated transects, and a data comparison tool that allows users to view the data either in scatter plot view comparing one parameter with another, or in time series view. 2) Our interactive lesson builder tool allows users to develop a library of online lesson units, which are collaboratively editable and sharable and provides starter templates designed from learning theory knowledge. 3) Our interactive concept map tool allows the user to build and use concept maps, a graphical interface to map the connection between concepts and ideas. This tool also provides semantic-based recommendations, and allows for embedding of associated resources such as movies, images and blogs. 4) Education web services (middleware) will provide an educational resource database API.

  1. ConMap: Investigating New Computer-Based Approaches to Assessing Conceptual Knowledge Structure in Physics.

    ERIC Educational Resources Information Center

    Beatty, Ian D.

    There is a growing consensus among educational researchers that traditional problem-based assessments are not effective tools for diagnosing a student's knowledge state and for guiding pedagogical intervention, and that new tools grounded in the results of cognitive science research are needed. The ConMap ("Conceptual Mapping") project, described…

  2. Using Digital Mapping Tool in Ill-Structured Problem Solving

    ERIC Educational Resources Information Center

    Bai, Hua

    2013-01-01

    Scaffolding students' problem solving and helping them to improve problem solving skills are critical in instructional design courses. This study investigated the effects of students' uses of a digital mapping tool on their problem solving performance in a design case study. It was found that the students who used the digital mapping tool…

  3. An evaluation tool for Myofascial Adhesions in Patients after Breast Cancer (MAP-BC evaluation tool): Concurrent, face and content validity.

    PubMed

    De Groef, An; Van Kampen, Marijke; Moortgat, Peter; Anthonissen, Mieke; Van den Kerckhove, Eric; Christiaens, Marie-Rose; Neven, Patrick; Geraerts, Inge; Devoogdt, Nele

    2018-01-01

    To investigate the concurrent, face and content validity of an evaluation tool for Myofascial Adhesions in Patients after Breast Cancer (MAP-BC evaluation tool). 1) Concurrent validity of the MAP-BC evaluation tool was investigated by exploring correlations (Spearman's rank Correlation Coefficient) between the subjective scores (0 -no adhesions to 3 -very strong adhesions) of the skin level using the MAP-BC evaluation tool and objective elasticity parameters (maximal skin extension and gross elasticity) generated by the Cutometer Dual MPA 580. Nine different examination points on and around the mastectomy scar were evaluated. 2) Face and content validity were explored by questioning therapists experienced with myofascial therapy in breast cancer patients about the comprehensibility and comprehensiveness of the MAP-BC evaluation tool. 1) Only three meaningful correlations were found on the mastectomy scar. For the most lateral examination point on the mastectomy scar a moderate negative correlation (-0.44, p = 0.01) with the maximal skin extension and a moderate positive correlation with the resistance versus ability of returning or 'gross elasticity' (0.42, p = 0.02) were found. For the middle point on the mastectomy scar an almost moderate positive correlation with gross elasticity was found as well (0.38, p = 0.04) 2) Content and face validity have been found to be good. Eighty-nine percent of the respondent found the instructions understandable and 98% found the scoring system obvious. Thirty-seven percent of the therapists suggested to add the possibility to evaluate additional anatomical locations in case of reconstructive and/or bilateral surgery. The MAP-BC evaluation tool for myofascial adhesions in breast cancer patients has good face and content validity. Evidence for good concurrent validity of the skin level was found only on the mastectomy scar itself.

  4. Randomized Trial to Compare the Immunogenicity and Safety of a CRM or TT Conjugated Quadrivalent Meningococcal Vaccine in Teenagers who Received a CRM or TT Conjugated Serogroup C Vaccine at Preschool Age.

    PubMed

    Ishola, David A; Andrews, Nick; Waight, Pauline; Yung, Chee-Fu; Southern, Jo; Bai, Xilian; Findlow, Helen; Matheson, Mary; England, Anna; Hallis, Bassam; Findlow, Jamie; Borrow, Ray; Miller, Elizabeth

    2015-08-01

    Protection after meningococcal C (MenC) conjugate (MCC) vaccination in early childhood is short-lived. Boosting with a quadrivalent vaccine in teenage years, a high-risk period for MenC disease, should protect against additional serogroups but might compromise MenC response. The carrier protein in the primary MCC vaccine determines the response to MCC booster in toddlers, but the relationship between primary vaccine and booster given later is unclear. This study compared responses to a CRM-conjugated or tetanus toxoid (TT)-conjugated MenACWY vaccine in teenagers primed with different MCC vaccines at preschool age. Ninety-three teenagers (16-19 years), who were previously randomized at age 3-6 years to receive single-dose MCC-CRM or MCC-TT, were randomized to receive either MenACWY-CRM or MenACWY-TT booster. Serum bactericidal antibodies (SBA, protective titer ≥ 8) were measured before, 1 month and 6 or 9 months after boosting. Preboosting, MCC-TT-primed teenagers had significantly higher MenC SBA titers than those MCC-CRM-primed (P = 0.02). Postboosting, both MenACWY vaccines induced protective SBA titers to all 4 serogroups in most participants (≥ 98% at 1 month and ≥ 90% by 9 months postboost). The highest MenC SBA titers were seen in those MCC-TT-primed and MenACWY-TT-boosted [geometric mean titer (GMT) ~ 22,000] followed by those boosted with MenACWY-CRM irrespective of priming (GMT ~ 12,000) and then those MCC-CRM-primed and MenACWY-TT-boosted (GMT ~ 5500). The estimated postbooster MenC SBA decline beyond 1 month was ~40% as time since booster doubles. Both vaccines were well tolerated with no attributable serious adverse events. Both MenACWY vaccines safely induced protective sustained antibody responses against all targeted serogroups in MCC-primed teenagers.

  5. Comparison of four recombinant hepatitis B vaccines applied on an accelerated schedule in healthy adults.

    PubMed

    Hernández-Bernal, Francisco; Aguilar-Betancourt, Arístides; Aljovin, Virginia; Arias, Gloria; Valenzuela, Carmen; de Alejo, Karen Pérez; Hernández, Karina; Oquendo, Orcilia; Figueredo, Niurka; Figueroa, Nelvis; Musacchio, Alexis; Véliz, Gloria; García, Elizeth; Mollineda, Alina D; Juvier, Ana Isabel; Trujillo, Janette; Delahanty, Aurora; Ortega, D; Cinza, Z; González, Verena L Muzio

    2011-10-01

    A post-marketing, double blind, randomised, controlled clinical trial to assess the immunogenicity and safety profiles of four commercially available recombinant hepatitis B vaccines was performed. The vaccines included in this study were Heberbiovac-HB (®) (Heber Biotec S.A., Havana, Cuba), Euvax-B (®) (LG Chemical Ltd., Seoul, Korea), Hepavax-Gene (®)   (Greencross Vaccine Corp., Seoul, Korea), and Engerix-B (®) (GlaxoSmithKline Biologicals, Rixensart, Belgium). Vaccines were administered intramuscularly to healthy adults in three 20mg doses at monthly intervals (0 - 1 -  2 months). Four hundred volunteers aged 18 to 45 years (average age, 35 years) non-reactive for serological markers of hepatitis B virus infection were vaccinated. Volunteers were randomly assigned (ratio 1:1:1:1) to one of the four treatment groups. The antibody response (anti-HBs) was assessed at days 60, 90 and 365 post-vaccination using a commercial kit. The four vaccines showed to be safe and highly immunogenic. Similar seroprotection rates (anti-HBs ≥10 IU/L) about one month after application of the second and third dose were obtained for Engerix-B (®) , Hepavax-Gene (®) , Euvax-B (®) , and Heberbiovac-HB (®) vaccines 96.7%, 96.6%, 100%, 100% and 98.8%, 89.5%, 100%, 100%, respectively.. Heberbiovac-HB (®) vaccine achieved significantly higher geometric mean antibody titers (GMT) and rate of good and  hyper-responders at all time-points post-vaccination. The GMT on day 365 after full vaccination was significantly reduced in all groups compared to day 90, although Heberbiovac-HB (®) showed the highest anti-HBs GMT and good-responders rate. The four vaccines were well tolerated and poorly reactogenic. No serious adverse events were observed. This study confirms an overall good immune response and rapid priming for the  four vaccines in the course of an accelerated schedule, with higher anti-HBs geometric mean concentrations and better responses for Heberbiovac-HB (®) . [WHO primary Registry Number: RPCEC00000075].

  6. Global Mean Temperature Timeseries Projections from GCMs: The Implications of Rebasing

    NASA Astrophysics Data System (ADS)

    Chapman, S. C.; Stainforth, D. A.; Watkins, N. W.

    2017-12-01

    Global climate models are assessed by comparison with observations through several benchmarks. One highlighted by the InterGovernmental Panel on Climate Change (IPCC) is their ability to reproduce "general features of the global and annual mean surface temperature changes over the historical period" [1,2] and to simulate "a trend in global-mean surface temperature from 1951 to 2012 that agrees with the observed trend" [3]. These aspects of annual mean global mean temperature (GMT) change are presented as one feature demonstrating the relevance of these models for climate projections. Here we consider a formal interpretation of "general features" and discuss the implications of this approach to model assessment and intercomparison, for the interpretation of GCM projections. Following the IPCC, we interpret a major element of "general features" as being the slow timescale response to external forcings. (Shorter timescale behaviour such as the response to volcanic eruptions are also elements of "general features" but are not considered here.) Also following the IPCC, we consider only GMT anomalies. The models have absolute temperatures which range over about 3K so this means their timeseries (and the observations) are rebased. We show that rebasing in combination with general agreement, implies a separation of scales which limits the degree to which sub-global behaviour can feedback on the global response. It also implies a degree of linearity in the GMT slow timescale response. For each individual model these implications only apply over the range of absolute temperatures simulated by the model in historic simulations. Taken together, however, they imply consequences over a wider range of GMTs. [1] IPCC, Fifth Assessment Report, Working Group 1, Technical Summary: Stocker et al. 2013. [2] IPCC, Fifth Assessment Report, Working Group 1, Chapter 9 - "Evaluation of Climate Models": Flato et al. 2013. [3] IPCC, Fifth Assessment Report, Working Group 1, Summary for Policy Makers: IPCC, 2013.

  7. Breastfeeding linked to the reduction of both rotavirus shedding and IgA levels after Rotarix® immunization in Mexican infants.

    PubMed

    Bautista-Marquez, Aurora; Velasquez, Daniel E; Esparza-Aguilar, Marcelino; Luna-Cruz, Maria; Ruiz-Moran, Tatiana; Sugata, Ken; Jiang, Baoming; Parashar, Umesh; Patel, Manish; Richardson, Vesta

    2016-10-17

    We examined potential risk factors on vaccine virus shedding and antibody seroresponse to human rotavirus vaccine (Rotarix) in Mexican infants. Two doses of Rotarix were administered to infants during the first two visits for their routine childhood immunization (∼8 and 15weeks of age) in Mexico City. Infant's characteristics and socioeconomic indicators were obtained, including history of long-term feeding practices (exclusively/predominantly breastfed and exclusively/predominantly non-breastfed). Two serum specimens were collected, one during the second rotavirus vaccine visit and one 7weeks later. Stool specimens were collected between days 4-7 after each of the two rotavirus vaccine doses. Rotavirus IgA and IgG titers in serum were determined by enzyme immunoassays (EIA) and rotavirus shedding in stool was assessed by EIA and confirmed by RT-PCR. The overall rotavirus IgA geometric mean titers (GMT) increased significantly post dose 2 from post dose 1 [176 (95%CI: 113-273) to 335 (238-471); p=0.020). Infants who were exclusively/predominantly breastfed were less likely to shed vaccine virus in stool than those who were formula-fed (22% vs. 43%, p=0.016). Infants who were breastfed had lower rotavirus IgA titers than those who were formula-fed after dose 1 [GMT: 145 (84-250) vs. 267 (126-566) p=0.188] and dose 2 [236 (147-378) vs.578 (367-910), p=0.007]. Infants who shed vaccine virus post dose 1 had significantly higher serum IgA GMT than those who did not shed [425 (188-965) vs. 150 (84-266), p=0.038]. Breastfeeding was linked with the reduction of both stool vaccine shedding, and IgA seroresponse. The reduced rotavirus replication in the gut and shedding after dose 1 may explain in part the lower IgA response in serum. Published by Elsevier Ltd.

  8. Comparing vaccines: a systematic review of the use of the non-inferiority margin in vaccine trials.

    PubMed

    Donken, R; de Melker, H E; Rots, N Y; Berbers, G; Knol, M J

    2015-03-17

    Non-inferiority (NI) randomized controlled trials (RCTs) aim to demonstrate that a new treatment is no worse than a comparator that has already shown its efficacy over placebo within a pre-specified margin. However, clear guidelines on how the NI margin should be determined are lacking for vaccine trials. A difference (seroprevalence/risk) of 10% or a geometric mean titre/concentration (GMT) ratio of 1.5 or 2.0 in antibody levels is implicitly recommended for vaccine trials. We aimed to explore which NI margins were used in vaccine RCTs and how they were determined. A systematic search for NI vaccine RCTs yielded 177 eligible articles. Data were extracted from these articles using a standardized form and included general characteristics and characteristics specific for NI trials. Relations between the study characteristics and the NI margin used were explored. Among the 143 studies using an NI margin based on difference (n=136 on immunogenicity, n=2 on efficacy and n=5 on safety), 66% used a margin of 10%, 23% used margins lower than 10% (range 1-7.5%) and 11% used margins larger than 10% (range 11.5-25%). Of the 103 studies using a NI margin based on the GMT ratio, 50% used a margin of 0.67/1.5 and 49% used 0.5/2.0. As observed, 85% of the studies did not discuss the method of margin determination; and 19% of the studies lacked a confidence interval or p-value for non-inferiority. Most NI vaccine RCTs used an NI margin of 10% for difference or a GMT ratio of 1.5 or 2.0 without a clear rationale. Most articles presented enough information for the reader to make a judgement about the NI margin used and the conclusions. The reporting on the design, margins used and results of NI vaccine trials could be improved; more explicit guidelines may help to achieve this end. Copyright © 2015 Elsevier Ltd. All rights reserved.

  9. Reconstructing paleoclimate fields using online data assimilation with a linear inverse model

    NASA Astrophysics Data System (ADS)

    Perkins, Walter A.; Hakim, Gregory J.

    2017-05-01

    We examine the skill of a new approach to climate field reconstructions (CFRs) using an online paleoclimate data assimilation (PDA) method. Several recent studies have foregone climate model forecasts during assimilation due to the computational expense of running coupled global climate models (CGCMs) and the relatively low skill of these forecasts on longer timescales. Here we greatly diminish the computational cost by employing an empirical forecast model (linear inverse model, LIM), which has been shown to have skill comparable to CGCMs for forecasting annual-to-decadal surface temperature anomalies. We reconstruct annual-average 2 m air temperature over the instrumental period (1850-2000) using proxy records from the PAGES 2k Consortium Phase 1 database; proxy models for estimating proxy observations are calibrated on GISTEMP surface temperature analyses. We compare results for LIMs calibrated using observational (Berkeley Earth), reanalysis (20th Century Reanalysis), and CMIP5 climate model (CCSM4 and MPI) data relative to a control offline reconstruction method. Generally, we find that the usage of LIM forecasts for online PDA increases reconstruction agreement with the instrumental record for both spatial fields and global mean temperature (GMT). Specifically, the coefficient of efficiency (CE) skill metric for detrended GMT increases by an average of 57 % over the offline benchmark. LIM experiments display a common pattern of skill improvement in the spatial fields over Northern Hemisphere land areas and in the high-latitude North Atlantic-Barents Sea corridor. Experiments for non-CGCM-calibrated LIMs reveal region-specific reductions in spatial skill compared to the offline control, likely due to aspects of the LIM calibration process. Overall, the CGCM-calibrated LIMs have the best performance when considering both spatial fields and GMT. A comparison with the persistence forecast experiment suggests that improvements are associated with the linear dynamical constraints of the forecast and not simply persistence of temperature anomalies.

  10. Trivalent influenza vaccine-induced antibody response to circulating influenza a (H3N2) viruses in 2010/11 and 2011/12 seasons.

    PubMed

    Hiroi, Satoshi; Morikawa, Saeko; Nakata, Keiko; Maeda, Akiko; Kanno, Tsuneji; Irie, Shin; Ohfuji, Satoko; Hirota, Yoshio; Kase, Tetsuo

    2015-01-01

    To evaluate antibody response induced by trivalent inactivated influenza vaccine (TIV) against circulating influenza A (H3N2) strains in healthy adults during the 2010/11 and 2011/12 seasons, a hemagglutination-inhibition (HI) assay was utilized to calculate geometric mean antibody titer (GMT), seroprotection rate (post vaccination HI titers of ≥1 :40), and seroresponse rate (4-fold increase in antibody level). In the 2010/11 season, GMT increased 1.8- to 2.0-fold following the first dose of TIV against 3 circulating strains and 2.2-fold following the second compared to before vaccination. The seroresponse rate ranged from 22% to 26% following the first dose of TIV and from 31% to 33% following the second (n = 54 ). The seroprotection rate increased from a range of 6% to 13% to a range of 26% to 33% following the first dose of TIV and to a range of 37% to 42% following the second (n = 54 ). In the 2011/12 season, GMT increased 1.4-fold against A/Osaka/110/2011 and 1.8-fold against A/Osaka/5/2012. For A/Osaka/110/2011, the seroresponse rate was 29%, and the seroprotection rate increased from 26% to 55% following vaccination (n = 31 ). For A/Osaka/5/2012, the seroresponse rate was 26%, and the seroprotection rate increased from 68% to 84% following vaccination (n = 31 ). HI assays with reference antisera demonstrated that the strains in the 2011/12 season were antigenically distinct from vaccine strain (A/Victoria/210/2009). In conclusion, the vaccination increased the seroprotection rate against circulating H3N2 strains in the 2010/11 and 2011/12 seasons. Vaccination of TIV might have potential to induce reactive antibodies against antigenically distinct circulating H3N2 viruses.

  11. PHLUX: Photographic Flux Tools for Solar Glare and Flux

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    2010-12-02

    A web-based tool to a) analytically and empirically quantify glare from reflected light and determine the potential impact (e.g., temporary flash blindness, retinal burn), and b) produce flux maps for central receivers. The tool accepts RAW digital photographs of the glare source (for hazard assessment) or the receiver (for flux mapping), as well as a photograph of the sun for intensity and size scaling. For glare hazard assessment, the tool determines the retinal irradiance (W/cm2) and subtended source angle for an observer and plots the glare source on a hazard spectrum (i.e., low-potential for flash blindness impact, potential for flashmore » blindness impact, retinal burn). For flux mapping, the tool provides a colored map of the receiver scaled by incident solar flux (W/m2) and unwraps the physical dimensions of the receiver while accounting for the perspective of the photographer (e.g., for a flux map of a cylindrical receiver, the horizontal axis denotes receiver angle in degrees and the vertical axis denotes vertical position in meters; for a flat panel receiver, the horizontal axis denotes horizontal position in meters and the vertical axis denotes vertical position in meters). The flux mapping capability also allows the user to specify transects along which the program plots incident solar flux on the receiver.« less

  12. EJSCREEN: Environmental Justice Screening and Mapping Tool

    EPA Pesticide Factsheets

    EJSCREEN is an environmental justice screening and mapping tool that provides EPA and the public with a nationally consistent approach to characterizing potential areas may warrant further consideration, analysis, or outreach.

  13. The implications of rebasing global mean temperature timeseries for GCM based climate projections

    NASA Astrophysics Data System (ADS)

    Stainforth, David; Chapman, Sandra; Watkins, Nicholas

    2017-04-01

    Global climate and earth system models are assessed by comparison with observations through a number of metrics. The InterGovernmental Panel on Climate Change (IPCC) highlights in particular their ability to reproduce "general features of the global and annual mean surface temperature changes over the historical period" [1,2] and to simulate "a trend in global-mean surface temperature from 1951 to 2012 that agrees with the observed trend" [3]. This focus on annual mean global mean temperature (hereafter GMT) change is presented as an important element in demonstrating the relevance of these models for climate projections. Any new model or new model version whose historic simulations fail to reproduce the "general features " and 20th century trends is likely therefore to undergo further tuning. Thus this focus could have implications for model development. Here we consider a formal interpretation of "general features" and discuss the implications of this approach to model assessment and intercomparison, for the interpretation of GCM projections. Following the IPCC, we interpret a major element of "general features" as being the slow timescale response to external forcings. (Shorter timescale behaviour such as the response to volcanic eruptions are also elements of "general features" but are not considered here.) Also following the IPCC, we consider only GMT anomalies i.e. changes with respect to some period. Since the models have absolute temperatures which range over about 3K (roughly observed GMT +/- 1.5K) this means their timeseries (and the observations) are rebased. We present timeseries of the slow timescale response of the CMIP5 models rebased to late-20th century temperatures and to mid-19th century temperatures. We provide a mathematical interpretation of this approach to model assessment and discuss two consequences. First is a separation of scales which limits the degree to which sub-global behaviour can feedback on the global response. Second, is an implication of linearity in the GMT response (to the extent that the slow-timescale response of the historic simulations is consistent with observations, and given their uncertainties). For each individual model these consequences only apply over the range of absolute temperatures simulated by the model in historic simulations. Taken together, however, they imply consequences over a much wider range of GMTs. The analysis suggests that this aspect of model evaluation risks providing a model development pressure which acts against a wide exploration of physically plausible responses; in particular against an exploration of potentially globally significant nonlinear responses and feedbacks. [1] IPCC, Fifth Assessment Report, Working Group 1, Technical Summary: Stocker et al. 2013. [2] IPCC, Fifth Assessment Report, Working Group 1, Chapter 9 - "Evaluation of Climate Models": Flato et al. 2013. [3] IPCC, Fifth Assessment Report, Working Group 1, Summary for Policy Makers: IPCC, 2013.

  14. Prioritizing Seafloor Mapping for Washington’s Pacific Coast

    PubMed Central

    Battista, Timothy; Buja, Ken; Christensen, John; Hennessey, Jennifer; Lassiter, Katrina

    2017-01-01

    Remote sensing systems are critical tools used for characterizing the geological and ecological composition of the seafloor. However, creating comprehensive and detailed maps of ocean and coastal environments has been hindered by the high cost of operating ship- and aircraft-based sensors. While a number of groups (e.g., academic research, government resource management, and private sector) are engaged in or would benefit from the collection of additional seafloor mapping data, disparate priorities, dauntingly large data gaps, and insufficient funding have confounded strategic planning efforts. In this study, we addressed these challenges by implementing a quantitative, spatial process to facilitate prioritizing seafloor mapping needs in Washington State. The Washington State Prioritization Tool (WASP), a custom web-based mapping tool, was developed to solicit and analyze mapping priorities from each participating group. The process resulted in the identification of several discrete, high priority mapping hotspots. As a result, several of the areas have been or will be subsequently mapped. Furthermore, information captured during the process about the intended application of the mapping data was paramount for identifying the optimum remote sensing sensors and acquisition parameters to use during subsequent mapping surveys. PMID:28350338

  15. [The experiment of participatory mapping in order to construct a cartographical alternative to the FHS].

    PubMed

    Goldstein, Roberta Argento; Barcellos, Christovam; Magalhães, Monica de Avelar Figueiredo Mafra; Gracie, Renata; Viacava, Francisco

    2013-01-01

    Maps and mapping procedures are useful tools for systematic interpretation and evaluation and for reporting of results to management. Applied to the Family Health Strategy (FHS), these maps permit the demarcation of the territory and the establishment of links between the territory, its population and health services. In this paper the use of maps by the FHS in 17 municipalities in northern and northeastern Brazil is studied and the process of demarcation and digitization of areas with the participation of teams is described. The survey conducted using questionnaires and discussion workshops showed that difficulties still prevail in reconciling the map (drawing) produced at the local level with maps produced by other government sectors. In general, the maps used at local level employ their own references, which prevent the interplay of information with other cartographic documents and their full use as a tool for evaluation and management. The combination of participatory mapping tools, associated with Geographic Information Systems (GIS) applications proposed in this paper, represents an alternative to mapping the territory of operations of FHS teams, as well as a reflection on the concept of territory and operation by the FHS.

  16. MAPPER: A personal computer map projection tool

    NASA Technical Reports Server (NTRS)

    Bailey, Steven A.

    1993-01-01

    MAPPER is a set of software tools designed to let users create and manipulate map projections on a personal computer (PC). The capability exists to generate five popular map projections. These include azimuthal, cylindrical, mercator, lambert, and sinusoidal projections. Data for projections are contained in five coordinate databases at various resolutions. MAPPER is managed by a system of pull-down windows. This interface allows the user to intuitively create, view and export maps to other platforms.

  17. Social Network Mapping: A New Tool For The Leadership Toolbox

    DTIC Science & Technology

    2002-04-01

    SOCIAL NETWORK MAPPING: A NEW TOOL FOR THE LEADERSHIP TOOLBOX By Elisabeth J. Strines, Colonel, USAF 8037 Washington Road Alexandria...valid OMB control number. 1. REPORT DATE 00 APR 2002 2. REPORT TYPE N/A 3. DATES COVERED - 4. TITLE AND SUBTITLE Social Network Mapping: A...describes the concept of social network mapping and demonstrates how it can be used by squadron commanders and leaders at all levels to provide subtle

  18. Visualizing the Geography of the Diseases of China: Western Disease Maps from Analytical Tools to Tools of Empire, Sovereignty, and Public Health Propaganda, 1878-1929.

    PubMed

    Hanson, Marta

    2017-09-01

    Argument This article analyzes for the first time the earliest western maps of diseases in China spanning fifty years from the late 1870s to the end of the 1920s. The 24 featured disease maps present a visual history of the major transformations in modern medicine from medical geography to laboratory medicine wrought on Chinese soil. These medical transformations occurred within new political formations from the Qing dynasty (1644-1911) to colonialism in East Asia (Hong Kong, Taiwan, Manchuria, Korea) and hypercolonialism within China (Tianjin, Shanghai, Amoy) as well as the new Republican Chinese nation state (1912-49). As a subgenre of persuasive graphics, physicians marshaled disease maps for various rhetorical functions within these different political contexts. Disease maps in China changed from being mostly analytical tools to functioning as tools of empire, national sovereignty, and public health propaganda legitimating new medical concepts, public health interventions, and political structures governing over human and non-human populations.

  19. The IHMC CmapTools software in research and education: a multi-level use case in Space Meteorology

    NASA Astrophysics Data System (ADS)

    Messerotti, Mauro

    2010-05-01

    The IHMC (Institute for Human and Machine Cognition, Florida University System, USA) CmapTools software is a powerful multi-platform tool for knowledge modelling in graphical form based on concept maps. In this work we present its application for the high-level development of a set of multi-level concept maps in the framework of Space Meteorology to act as the kernel of a space meteorology domain ontology. This is an example of a research use case, as a domain ontology coded in machine-readable form via e.g. OWL (Web Ontology Language) is suitable to be an active layer of any knowledge management system embedded in a Virtual Observatory (VO). Apart from being manageable at machine level, concept maps developed via CmapTools are intrinsically human-readable and can embed hyperlinks and objects of many kinds. Therefore they are suitable to be published on the web: the coded knowledge can be exploited for educational purposes by the students and the public, as the level of information can be naturally organized among linked concept maps in progressively increasing complexity levels. Hence CmapTools and its advanced version COE (Concept-map Ontology Editor) represent effective and user-friendly software tools for high-level knowledge represention in research and education.

  20. Body Mapping as a Youth Sexual Health Intervention and Data Collection Tool

    PubMed Central

    Lys, Candice; Gesink, Dionne; Strike, Carol; Larkin, June

    2018-01-01

    In this article, we describe and evaluate body mapping as (a) an arts-based activity within Fostering Open eXpression Among Youth (FOXY), an educational intervention targeting Northwest Territories (NWT) youth, and (b) a research data collection tool. Data included individual interviews with 41 female participants (aged 13–17 years) who attended FOXY body mapping workshops in six communities in 2013, field notes taken by the researcher during the workshops and interviews, and written reflections from seven FOXY facilitators on the body mapping process (from 2013 to 2016). Thematic analysis explored the utility of body mapping using a developmental evaluation methodology. The results show body mapping is an intervention tool that supports and encourages participant self-reflection, introspection, personal connectedness, and processing difficult emotions. Body mapping is also a data collection catalyst that enables trust and youth voice in research, reduces verbal communication barriers, and facilitates the collection of rich data regarding personal experiences. PMID:29303048

  1. The impact of CmapTools utilization towards students' conceptual change on optics topic

    NASA Astrophysics Data System (ADS)

    Rofiuddin, Muhammad Rifqi; Feranie, Selly

    2017-05-01

    Science teachers need to help students identify their prior ideas and modify them based on scientific knowledge. This process is called as conceptual change. One of essential tools to analyze students' conceptual change is by using concept map. Concept Maps are graphical representations of knowledge that are comprised of concepts and the relationships between them. Constructing concept map is implemented by adapting the role of technology to support learning process, as it is suitable with Educational Ministry Regulation No.68 year 2013. Institute for Human and Machine Cognition (IHMC) has developed CmapTools, a client-server software for easily construct and visualize concept maps. This research aims to investigate secondary students' conceptual change after experiencing five-stage conceptual teaching model by utilizing CmapTools in learning Optics. Weak experimental method through one group pretest-posttest design is implemented in this study to collect preliminary and post concept map as qualitative data. Sample was taken purposively of 8th grade students (n= 22) at one of private schools Bandung, West Java. Conceptual change based on comparison of preliminary and post concept map construction is assessed based on rubric of concept map scoring and structure. Results shows significance conceptual change differences at 50.92 % that is elaborated into concept map element such as prepositions and hierarchical level in high category, cross links in medium category and specific examples in low category. All of the results are supported with the students' positive response towards CmapTools utilization that indicates improvement of motivation, interest, and behavior aspect towards Physics lesson.

  2. Mapping Application Partnership Tool for Anacostia Watershed (Washington, DC/Maryland)

    EPA Pesticide Factsheets

    Mapping Application Partnership Tool (MAPT) of the Urban Waters Federal Partnership (UWFP) reconnects urban communities with their waterways by improving coordination among federal agencies and collaborating with community-led efforts.

  3. Curriculum Mapping: A Method to Assess and Refine Undergraduate Degree Programs

    ERIC Educational Resources Information Center

    Joyner-Melito, Helen S.

    2016-01-01

    Over the past several decades, there has been increasing interest in program- and university-level assessment and aligning learning outcomes to program content. Curriculum mapping is a tool that creates a visual map of all courses in the curriculum and how they relate to curriculum learning outcomes. Assessment tools/activities are often included…

  4. Assessing ecological departure from reference conditions with the Fire Regime Condition Class (FRCC) Mapping Tool

    Treesearch

    Stephen W. Barrett; Thomas DeMeo; Jeffrey L. Jones; J.D. Zeiler; Lee C. Hutter

    2006-01-01

    Knowledge of ecological departure from a range of reference conditions provides a critical context for managing sustainable ecosystems. Fire Regime Condition Class (FRCC) is a qualitative measure characterizing possible departure from historical fire regimes. The FRCC Mapping Tool was developed as an ArcMap extension utilizing the protocol identified by the Interagency...

  5. Concept Maps: An Alternative Methodology to Assess Young Children

    ERIC Educational Resources Information Center

    Atiles, Julia T.; Dominique-Maikell, Nikole; McKean, Kathleen

    2014-01-01

    The authors investigated the utility and efficacy of using concepts maps as a research tool to assess young children. Pre- and post- concept maps have been used as an assessment and evaluation tool with teachers and with older students, typically children who can read and write; this article summarizes an investigation into the utility of using…

  6. DistMap: a toolkit for distributed short read mapping on a Hadoop cluster.

    PubMed

    Pandey, Ram Vinay; Schlötterer, Christian

    2013-01-01

    With the rapid and steady increase of next generation sequencing data output, the mapping of short reads has become a major data analysis bottleneck. On a single computer, it can take several days to map the vast quantity of reads produced from a single Illumina HiSeq lane. In an attempt to ameliorate this bottleneck we present a new tool, DistMap - a modular, scalable and integrated workflow to map reads in the Hadoop distributed computing framework. DistMap is easy to use, currently supports nine different short read mapping tools and can be run on all Unix-based operating systems. It accepts reads in FASTQ format as input and provides mapped reads in a SAM/BAM format. DistMap supports both paired-end and single-end reads thereby allowing the mapping of read data produced by different sequencing platforms. DistMap is available from http://code.google.com/p/distmap/

  7. DistMap: A Toolkit for Distributed Short Read Mapping on a Hadoop Cluster

    PubMed Central

    Pandey, Ram Vinay; Schlötterer, Christian

    2013-01-01

    With the rapid and steady increase of next generation sequencing data output, the mapping of short reads has become a major data analysis bottleneck. On a single computer, it can take several days to map the vast quantity of reads produced from a single Illumina HiSeq lane. In an attempt to ameliorate this bottleneck we present a new tool, DistMap - a modular, scalable and integrated workflow to map reads in the Hadoop distributed computing framework. DistMap is easy to use, currently supports nine different short read mapping tools and can be run on all Unix-based operating systems. It accepts reads in FASTQ format as input and provides mapped reads in a SAM/BAM format. DistMap supports both paired-end and single-end reads thereby allowing the mapping of read data produced by different sequencing platforms. DistMap is available from http://code.google.com/p/distmap/ PMID:24009693

  8. Self-optimizing Monte Carlo method for nuclear well logging simulation

    NASA Astrophysics Data System (ADS)

    Liu, Lianyan

    1997-09-01

    In order to increase the efficiency of Monte Carlo simulation for nuclear well logging problems, a new method has been developed for variance reduction. With this method, an importance map is generated in the regular Monte Carlo calculation as a by-product, and the importance map is later used to conduct the splitting and Russian roulette for particle population control. By adopting a spatial mesh system, which is independent of physical geometrical configuration, the method allows superior user-friendliness. This new method is incorporated into the general purpose Monte Carlo code MCNP4A through a patch file. Two nuclear well logging problems, a neutron porosity tool and a gamma-ray lithology density tool are used to test the performance of this new method. The calculations are sped up over analog simulation by 120 and 2600 times, for the neutron porosity tool and for the gamma-ray lithology density log, respectively. The new method enjoys better performance by a factor of 4~6 times than that of MCNP's cell-based weight window, as per the converged figure-of-merits. An indirect comparison indicates that the new method also outperforms the AVATAR process for gamma-ray density tool problems. Even though it takes quite some time to generate a reasonable importance map from an analog run, a good initial map can create significant CPU time savings. This makes the method especially suitable for nuclear well logging problems, since one or several reference importance maps are usually available for a given tool. Study shows that the spatial mesh sizes should be chosen according to the mean-free-path. The overhead of the importance map generator is 6% and 14% for neutron and gamma-ray cases. The learning ability towards a correct importance map is also demonstrated. Although false-learning may happen, physical judgement can help diagnose with contributon maps. Calibration and analysis are performed for the neutron tool and the gamma-ray tool. Due to the fact that a very good initial importance map is always available after the first point has been calculated, high computing efficiency is maintained. The availability of contributon maps provides an easy way of understanding the logging measurement and analyzing for the depth of investigation.

  9. Computer aided manufacturing for complex freeform optics

    NASA Astrophysics Data System (ADS)

    Wolfs, Franciscus; Fess, Ed; Johns, Dustin; LePage, Gabriel; Matthews, Greg

    2017-10-01

    Recently, the desire to use freeform optics has been increasing. Freeform optics can be used to expand the capabilities of optical systems and reduce the number of optics needed in an assembly. The traits that increase optical performance also present challenges in manufacturing. As tolerances on freeform optics become more stringent, it is necessary to continue to improve methods for how the grinding and polishing processes interact with metrology. To create these complex shapes, OptiPro has developed a computer aided manufacturing package called PROSurf. PROSurf generates tool paths required for grinding and polishing freeform optics with multiple axes of motion. It also uses metrology feedback for deterministic corrections. ProSurf handles 2 key aspects of the manufacturing process that most other CAM systems struggle with. The first is having the ability to support several input types (equations, CAD models, point clouds) and still be able to create a uniform high-density surface map useable for generating a smooth tool path. The second is to improve the accuracy of mapping a metrology file to the part surface. To perform this OptiPro is using 3D error maps instead of traditional 2D maps. The metrology error map drives the tool path adjustment applied during processing. For grinding, the error map adjusts the tool position to compensate for repeatable system error. For polishing, the error map drives the relative dwell times of the tool across the part surface. This paper will present the challenges associated with these issues and solutions that we have created.

  10. KSC-02pd0456

    NASA Image and Video Library

    2002-04-08

    KENNEDY SPACE CENTER, FLA. - Space Shuttle Atlantis seems surrounded by birds - most likely pelicans - as it roars into the clear blue sky on mission STS-110. Liftoff occurred at 4:44:19 p.m. EDT (20:41:19 GMT). Carrying the S0 Integrated Truss Structure and Mobile Transporter, STS-110 is the 13th assembly flight to the International Space Station

  11. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007845 (15 June 2013) --- Surrounded by the blackness of space, the European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” approaches the International Space Station. The spacecraft went on to successfully dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  12. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007852 (15 June 2013) --- Surrounded by the blackness of space, the European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” approaches the International Space Station. The spacecraft went on to successfully dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  13. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007844 (15 June 2013) --- Surrounded by the blackness of space, the European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” approaches the International Space Station. The spacecraft went on to successfully dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  14. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007816 (15 June 2013) --- Surrounded by the blackness of space, the European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” approaches the International Space Station. The spacecraft went on to successfully dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  15. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007860 (15 June 2013) --- As seen from a window in the Pirs module on the International Space Station, the European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” is about to dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  16. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007850 (15 June 2013) --- Surrounded by the blackness of space, the European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” approaches the International Space Station. The spacecraft went on to successfully dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  17. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007840 (15 June 2013) --- Surrounded by the blackness of space, the European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” approaches the International Space Station. The spacecraft went on to successfully dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  18. ESA Albert Einstein ATV-4 during approach

    NASA Image and Video Library

    2013-06-15

    ISS036-E-007854 (15 June 2013) --- Surrounded by the darkness of space, the European Space Agency's Automated Transfer Vehicle-4 (ATV-4) “Albert Einstein” approaches the International Space Station. The spacecraft went on to successfully dock to the orbital outpost at 2:07 GMT, June 15, 2013, following a ten-day period of free-flight.

  19. Flight data file: STS-4 crew activity plan

    NASA Technical Reports Server (NTRS)

    Pippert, E. B., Jr.

    1982-01-01

    The STS-4 Crew Activity Plan contains the on-orbit timeline, which is a flight data file article. Various time scales such as Mission Elapsed Time (MET), Greenwich Mean Time (GMT), and time until deorbit ignition as well as crew activities, day/night, orbit position, ground tracking, communication coverage, attitude, and maneuvers are presented in chart form.

  20. 77 FR 34028 - Notice of Teleconference of the Chronic Hazard Advisory Panel on Phthalates and Phthalate...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-08

    ... combination with other phthalates; Examine the likely levels of children's, pregnant women's, and others... children's health of all phthalates and phthalate alternatives, as used in children's toys and child care... (15 to 17 GMT) on Friday, June 29, 2012. Interested members of the public may listen to the CHAP's...

  1. Parazynski reviews a checklist on the middeck

    NASA Image and Video Library

    1998-10-30

    STS095-E-5176 (30 Oct. 1998) --- Astronaut Scott E. Parazynski (left), STS-95 mission specialist, checks a note attached to one of the stowage lockers on Discovery's middeck. Nearby is astronaut Steven W. Lindsey, pilot, seated on one of the bunk beds. The photo was taken with an electronic still camera (ESC) at 23:43:51 GMT, Oct. 30.

  2. Topographic Controls on Rainfall and Runoff.

    DTIC Science & Technology

    1986-03-01

    pattern seems likely to he most predictaible for pa~irc’ eirlhriCierrt and least for thunderstorms, with convectionaily-triqLgered raircr’lts sia in between...Cold front or occr.osrun svreed GEOSTROP-r r SCALLS for s(,toars rt 2mb nleroalS ,DATE 25 EC983- W ~TIME _2j400.GMT- Hebride Redrawn rom MetoliCkalOfc

  3. MS Dunbar works onboard Spacehab

    NASA Image and Video Library

    1998-03-04

    S89-E-5285 (25 Jan 1998) --- This Electronic Still Camera (ESC) image shows mission specialist Bonnie J. Dunbar, payload commander, working in the Spacehab Module onboard the Space Shuttle Endeavour. Dunbar is working with RME-1326, a Risk Mitigation Experiment (RME) at the Volatile Removal Assembly (VRA). This ESC view was taken on January 25, 1998 at 13:16:22 GMT.

  4. View in the Node 1/Unity module after docking

    NASA Image and Video Library

    1998-12-10

    S88-E-5113 (12-10-98) --- Sergei Krikalev, mission specialist representing the Russian Space Agency (RSA), totes a notebook onboard the Unity connecting module while he and two crewmates perform various tasks to ready it for its ISS role. The photo was taken with an electronic still camera (ESC) at 20:27:03 GMT, Dec. 10.

  5. 77 FR 63758 - Magnuson-Stevens Act Provisions; Fisheries Off West Coast States; Biennial Specifications and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-10-17

    ... Access This final rule is accessible via the Internet at the Office of the Federal Register's Web site at... Pacific Fishery Management Council's Web site at http://www.pcouncil.org/ . Background The Pacific Coast... fishery and the potential impacts on overall catch levels. The Council's Groundfish Management Team (GMT...

  6. Optomechanical design concept for the Giant Magellan Telescope Multi-object Astronomical and Cosmological Spectrograph (GMACS)

    NASA Astrophysics Data System (ADS)

    Prochaska, Travis; Sauseda, Marcus; Beck, James; Schmidt, Luke; Cook, Erika; DePoy, Darren L.; Marshall, Jennifer L.; Ribeiro, Rafael; Taylor, Keith; Jones, Damien; Froning, Cynthia; Pak, Soojong; Mendes de Oliveira, Claudia; Papovich, Casey; Ji, Tae-Geun; Lee, Hye-In

    2016-08-01

    We describe a preliminary conceptual optomechanical design for GMACS, a wide-field, multi-object, moderate resolution optical spectrograph for the Giant Magellan Telescope (GMT). This paper describes the details of the GMACS optomechanical conceptual design, including the requirements and considerations leading to the design, mechanisms, optical mounts, and predicted flexure performance.

  7. Declaratory Policy for the Strategic Employment of the Soviet Navy,

    DTIC Science & Technology

    1984-09-01

    Makeyev , "SLOC Under Present- Day Conditions," Morskoy Sbornik, No. 7 July 1979, pp. 19-22; and Ammon, p. 99. • 13. Makayev, pp. 21-22. -98- r7 7...Soviet Army Club in Moscow, July 23, 1971, excerpts reported by Mikhail Levchinskiy on Moscow Domestic Service in Russian at 1800 GMT and summary by

  8. Currie in FGB during repair of battery recharger

    NASA Image and Video Library

    1998-12-11

    S88-E-5076 (12-11-98) --- Astronaut Nancy J. Currie, mission specialist, participates in work aboard Zarya. One of Currie's tasks was to replace a faulty unit which controls the discharging of stored energy from one of the module's six batteries. The photo was taken with an electronic still camera (ESC) at 01:58:16 GMT, Dec. 11.

  9. MARs Tools for Interactive ANalysis (MARTIAN): Google Maps Tools for Visual Exploration of Geophysical Modeling on Mars

    NASA Astrophysics Data System (ADS)

    Dimitrova, L. L.; Haines, M.; Holt, W. E.; Schultz, R. A.; Richard, G.; Haines, A. J.

    2006-12-01

    Interactive maps of surface-breaking faults and stress models on Mars provide important tools to engage undergraduate students, educators, and scientists with current geological and geophysical research. We have developed a map based on the Google Maps API -- an Internet based tool combining DHTML and AJAX, -- which allows very large maps to be viewed over the World Wide Web. Typically, small portions of the maps are downloaded as needed, rather than the entire image at once. This set-up enables relatively fast access for users with low bandwidth. Furthermore, Google Maps provides an extensible interactive interface making it ideal for visualizing multiple data sets at the user's choice. The Google Maps API works primarily with data referenced to latitudes and longitudes, which is then mapped in Mercator projection only. We have developed utilities for general cylindrical coordinate systems by converting these coordinates into equivalent Mercator projection before including them on the map. The MARTIAN project is available at http://rock.geo.sunysb.edu/~holt/Mars/MARTIAN/. We begin with an introduction to the Martian surface using a topography model. Faults from several datasets are classified by type (extension vs. compression) and by time epoch. Deviatoric stresses due to gravitational potential energy differences, calculated from the topography and crustal thickness, can be overlain. Several quantitative measures for the fit of the stress field to the faults are also included. We provide introductory text and exercises spanning a range of topics: how are faults identified, what stress is and how it relates to faults, what gravitational potential energy is and how variations in it produce stress, how the models are created, and how these models can be evaluated and interpreted. The MARTIAN tool is used at Stony Brook University in GEO 310: Introduction to Geophysics, a class geared towards junior and senior geosciences majors. Although this project is in its early stages, high school and college teachers, as well as researchers have expressed interest in using and extending these tools for visualizing and interacting with data on Earth and other planetary bodies.

  10. Developing a mapping tool for tablets

    NASA Astrophysics Data System (ADS)

    Vaughan, Alan; Collins, Nathan; Krus, Mike

    2014-05-01

    Digital field mapping offers significant benefits when compared with traditional paper mapping techniques in that it provides closer integration with downstream geological modelling and analysis. It also provides the mapper with the ability to rapidly integrate new data with existing databases without the potential degradation caused by repeated manual transcription of numeric, graphical and meta-data. In order to achieve these benefits, a number of PC-based digital mapping tools are available which have been developed for specific communities, eg the BGS•SIGMA project, Midland Valley's FieldMove®, and a range of solutions based on ArcGIS® software, which can be combined with either traditional or digital orientation and data collection tools. However, with the now widespread availability of inexpensive tablets and smart phones, a user led demand for a fully integrated tablet mapping tool has arisen. This poster describes the development of a tablet-based mapping environment specifically designed for geologists. The challenge was to deliver a system that would feel sufficiently close to the flexibility of paper-based geological mapping while being implemented on a consumer communication and entertainment device. The first release of a tablet-based geological mapping system from this project is illustrated and will be shown as implemented on an iPad during the poster session. Midland Valley is pioneering tablet-based mapping and, along with its industrial and academic partners, will be using the application in field based projects throughout this year and will be integrating feedback in further developments of this technology.

  11. National Interest Shown in Watershed Mapping Tool

    EPA Pesticide Factsheets

    The State of Maryland is able to identify prime locations for watershed restoration and preservation using an interactive mapping tool developed by a partnership of agencies led by EPA’s Mid-Atlantic Water Protection Division.

  12. Prioritising coastal zone management issues through fuzzy cognitive mapping approach.

    PubMed

    Meliadou, Aleka; Santoro, Francesca; Nader, Manal R; Dagher, Manale Abou; Al Indary, Shadi; Salloum, Bachir Abi

    2012-04-30

    Effective public participation is an essential component of Integrated Coastal Zone Management implementation. To promote such participation, a shared understanding of stakeholders' objectives has to be built to ultimately result in common coastal management strategies. The application of quantitative and semi-quantitative methods involving tools such as Fuzzy Cognitive Mapping is presently proposed for reaching such understanding. In this paper we apply the Fuzzy Cognitive Mapping tool to elucidate the objectives and priorities of North Lebanon's coastal productive sectors, and to formalize their coastal zone perceptions and knowledge. Then, we investigate the potential of Fuzzy Cognitive Mapping as tool for support coastal zone management. Five round table discussions were organized; one for the municipalities of the area and one for each of the main coastal productive sectors (tourism, industry, fisheries, agriculture), where the participants drew cognitive maps depicting their views. The analysis of the cognitive maps showed a large number of factors perceived as affecting the current situation of the North Lebanon coastal zone that were classified into five major categories: governance, infrastructure, environment, intersectoral interactions and sectoral initiatives. Furthermore, common problems, expectations and management objectives for all sectors were exposed. Within this context, Fuzzy Cognitive Mapping proved to be an essential tool for revealing stakeholder knowledge and perception and understanding complex relationships. Copyright © 2011 Elsevier Ltd. All rights reserved.

  13. Preliminary global paleogeographic maps through the Greenhouse-Icehouse transition: forcing of the Drake Passage and Asian Monsoons.

    NASA Astrophysics Data System (ADS)

    Poblete, Fernando; Dupont-Nivet, Guillaume; Licht, Alexis; van Hinsbergen, Douwe; Roperch, Pierrick; Guillocheau, Francois; Baby, Guillaume; Baatsen, Michiel

    2017-04-01

    Paleogeographic maps are essential for understanding Earth dynamics. They provide the necessary boundary conditions for climate and geodynamic modeling, surface processes and biotic interactions. In particular, the opening and closing of ocean gateways and the growth of major mountain belts are major drivers of climate changes and biotic interchange. However, the timing and spatial extent of such events are highly controversial and regularly questioned by new data. As part of the ERC "MAGIC" project focusing on Asian Monsoons during the Icehouse to Greenhouse transition we thus produced a set of worldwide Cenozoic paleogeographic maps in the period time between 60 to 20 Ma, with a set of boundary conditions specific to the India-Asia collision zone and the Drake Passage. The creation of a paleogeographic map followed a rigorous and reproductively methodology that integrates paleobathymetric, paleoshoreline and paleotopographic data into a coherent plate tectonic model using the open source software GPlates. (1) We use the model provided by Seton et al. (2012) as a first order tectonic model modified to integrate the full restoration of five regions: the Andes, the Scotia Arc, Africa, The Mediterranean Sea and the Tibet-Himalayan collision zone. (2) The paleobathymetry was provided by Müller et al. (2008) using age-depth relationships and assuming symmetric ridge spreading. (3) Paleoshoreline maps were modified according to the fossil database from fossilworks.org and the geological record and were used to represent the boundary between terrestrial and marine paleo-environments. (4) To reconstruct paleoelevations, the most controversial task, we compiled a wide range of data including stable isotope, leaf physiognomy, and thermochronology combined with regional fossil and geological records (tectonic setting) and geomorphological data. Finally, we use the open source GMT software and a set of masks to modify the current Earth relief model (ETOPO) according to the estimated paleoelevation for specific region at each period of time. Our approach specifically takes into account the evolution of continental margins. Paleotopographic evolution is coupled with the evolving shape of continents. Considering the constant addition of new data and models, the value of this method is to generate a progressive paleorelief model of the Earth that can be easily compared and updated with new data.

  14. Benchmarking short sequence mapping tools

    PubMed Central

    2013-01-01

    Background The development of next-generation sequencing instruments has led to the generation of millions of short sequences in a single run. The process of aligning these reads to a reference genome is time consuming and demands the development of fast and accurate alignment tools. However, the current proposed tools make different compromises between the accuracy and the speed of mapping. Moreover, many important aspects are overlooked while comparing the performance of a newly developed tool to the state of the art. Therefore, there is a need for an objective evaluation method that covers all the aspects. In this work, we introduce a benchmarking suite to extensively analyze sequencing tools with respect to various aspects and provide an objective comparison. Results We applied our benchmarking tests on 9 well known mapping tools, namely, Bowtie, Bowtie2, BWA, SOAP2, MAQ, RMAP, GSNAP, Novoalign, and mrsFAST (mrFAST) using synthetic data and real RNA-Seq data. MAQ and RMAP are based on building hash tables for the reads, whereas the remaining tools are based on indexing the reference genome. The benchmarking tests reveal the strengths and weaknesses of each tool. The results show that no single tool outperforms all others in all metrics. However, Bowtie maintained the best throughput for most of the tests while BWA performed better for longer read lengths. The benchmarking tests are not restricted to the mentioned tools and can be further applied to others. Conclusion The mapping process is still a hard problem that is affected by many factors. In this work, we provided a benchmarking suite that reveals and evaluates the different factors affecting the mapping process. Still, there is no tool that outperforms all of the others in all the tests. Therefore, the end user should clearly specify his needs in order to choose the tool that provides the best results. PMID:23758764

  15. EnGeoMAP - geological applications within the EnMAP hyperspectral satellite science program

    NASA Astrophysics Data System (ADS)

    Boesche, N. K.; Mielke, C.; Rogass, C.; Guanter, L.

    2016-12-01

    Hyperspectral investigations from near field to space substantially contribute to geological exploration and mining monitoring of raw material and mineral deposits. Due to their spectral characteristics, large mineral occurrences and minefields can be identified from space and the spatial distribution of distinct proxy minerals be mapped. In the frame of the EnMAP hyperspectral satellite science program a mineral and elemental mapping tool was developed - the EnGeoMAP. It contains a basic mineral mapping and a rare earth element mapping approach. This study shows the performance of EnGeoMAP based on simulated EnMAP data of the rare earth element bearing Mountain Pass Carbonatite Complex, USA, and the Rodalquilar and Lomilla Calderas, Spain, which host the economically relevant gold-silver, lead-zinc-silver-gold and alunite deposits. The mountain pass image data was simulated on the basis of AVIRIS Next Generation images, while the Rodalquilar data is based on HyMap images. The EnGeoMAP - Base approach was applied to both images, while the mountain pass image data were additionally analysed using the EnGeoMAP - REE software tool. The results are mineral and elemental maps that serve as proxies for the regional lithology and deposit types. The validation of the maps is based on chemical analyses of field samples. Current airborne sensors meet the spatial and spectral requirements for detailed mineral mapping and future hyperspectral space borne missions will additionally provide a large coverage. For those hyperspectral missions, EnGeoMAP is a rapid data analysis tool that is provided to spectral geologists working in mineral exploration.

  16. The Family Map: A Tool for Understanding the Risks for Children in Families with Substance Abuse

    ERIC Educational Resources Information Center

    Bokony, Patti A.; Conners-Burrow, Nicola A.; Whiteside-Mansell, Leanne; Johnson, Danya; McKelvey, Lorraine; Bradley, Robert H.

    2010-01-01

    This article reviews the findings from our assessments of children and their families in two Head Start programs using the Family Map. Specifically, we used the Family Map assessment tool to identify risks to children associated with alcohol and drug use in families with young children. Practical suggestions are offered to administrators about the…

  17. A Study to Determine the Contribution Made by Concept Maps to a Computer Architecture and Organization Course

    ERIC Educational Resources Information Center

    Aydogan, Tuncay; Ergun, Serap

    2016-01-01

    Concept mapping is a method of graphical learning that can be beneficial as a study method for concept linking and organization. Concept maps, which provide an elegant, easily understood representation of an expert's domain knowledge, are tools for organizing and representing knowledge. These tools have been used in educational environments to…

  18. GIS-based interactive tool to map the advent of world conquerors

    NASA Astrophysics Data System (ADS)

    Lakkaraju, Mahesh

    The objective of this thesis is to show the scale and extent of some of the greatest empires the world has ever seen. This is a hybrid project between the GIS based interactive tool and the web-based JavaScript tool. This approach lets the students learn effectively about the emperors themselves while understanding how long and far their empires spread. In the GIS based tool, a map is displayed with various points on it, and when a user clicks on one point, the relevant information of what happened at that particular place is displayed. Apart from this information, users can also select the interactive animation button and can walk through a set of battles in chronological order. As mentioned, this uses Java as the main programming language, and MOJO (Map Objects Java Objects) provided by ESRI. MOJO is very effective as its GIS related features can be included in the application itself. This app. is a simple tool and has been developed for university or high school level students. D3.js is an interactive animation and visualization platform built on the Javascript framework. Though HTML5, CSS3, Javascript and SVG animations can be used to derive custom animations, this tool can help bring out results with less effort and more ease of use. Hence, it has become the most sought after visualization tool for multiple applications. D3.js has provided a map-based visualization feature so that we can easily display text-based data in a map-based interface. To draw the map and the points on it, D3.js uses data rendered in TOPO JSON format. The latitudes and longitudes can be provided, which are interpolated into the Map svg. One of the main advantages of doing it this way is that more information is retained when we use a visual medium.

  19. PLASMAP: an interactive computational tool for storage, retrieval and device-independent graphic display of conventional restriction maps.

    PubMed Central

    Stone, B N; Griesinger, G L; Modelevsky, J L

    1984-01-01

    We describe an interactive computational tool, PLASMAP, which allows the user to electronically store, retrieve, and display circular restriction maps. PLASMAP permits users to construct libraries of plasmid restriction maps as a set of files which may be edited in the laboratory at any time. The display feature of PLASMAP quickly generates device-independent, artist-quality, full-color or monochrome, hard copies or CRT screens of complex, conventional circular restriction maps. PMID:6320096

  20. Making Air Pollution Visible: A Tool for Promoting Environmental Health Literacy.

    PubMed

    Cleary, Ekaterina Galkina; Patton, Allison P; Wu, Hsin-Ching; Xie, Alan; Stubblefield, Joseph; Mass, William; Grinstein, Georges; Koch-Weser, Susan; Brugge, Doug; Wong, Carolyn

    2017-04-12

    Digital maps are instrumental in conveying information about environmental hazards geographically. For laypersons, computer-based maps can serve as tools to promote environmental health literacy about invisible traffic-related air pollution and ultrafine particles. Concentrations of these pollutants are higher near major roadways and increasingly linked to adverse health effects. Interactive computer maps provide visualizations that can allow users to build mental models of the spatial distribution of ultrafine particles in a community and learn about the risk of exposure in a geographic context. The objective of this work was to develop a new software tool appropriate for educating members of the Boston Chinatown community (Boston, MA, USA) about the nature and potential health risks of traffic-related air pollution. The tool, the Interactive Map of Chinatown Traffic Pollution ("Air Pollution Map" hereafter), is a prototype that can be adapted for the purpose of educating community members across a range of socioeconomic contexts. We built the educational visualization tool on the open source Weave software platform. We designed the tool as the centerpiece of a multimodal and intergenerational educational intervention about the health risk of traffic-related air pollution. We used a previously published fine resolution (20 m) hourly land-use regression model of ultrafine particles as the algorithm for predicting pollution levels and applied it to one neighborhood, Boston Chinatown. In designing the map, we consulted community experts to help customize the user interface to communication styles prevalent in the target community. The product is a map that displays ultrafine particulate concentrations averaged across census blocks using a color gradation from white to dark red. The interactive features allow users to explore and learn how changing meteorological conditions and traffic volume influence ultrafine particle concentrations. Users can also select from multiple map layers, such as a street map or satellite view. The map legends and labels are available in both Chinese and English, and are thus accessible to immigrants and residents with proficiency in either language. The map can be either Web or desktop based. The Air Pollution Map incorporates relevant language and landmarks to make complex scientific information about ultrafine particles accessible to members of the Boston Chinatown community. In future work, we will test the map in an educational intervention that features intergenerational colearning and the use of supplementary multimedia presentations. ©Ekaterina Galkina Cleary, Allison P Patton, Hsin-Ching Wu, Alan Xie, Joseph Stubblefield, William Mass, Georges Grinstein, Susan Koch-Weser, Doug Brugge, Carolyn Wong. Originally published in JMIR Public Health and Surveillance (http://publichealth.jmir.org), 12.04.2017.

  1. Story Map Instruction: A Road Map for Reading Comprehension.

    ERIC Educational Resources Information Center

    Davis, Zephaniah, T.; McPherson, Michael D.

    1989-01-01

    Introduces teachers to the development and use of story maps as a tool for promoting reading comprehension. Presents a definition and review of story map research. Explains how to construct story maps, and offers suggestions for starting story map instruction. Provides variations on the use of story maps. (MG)

  2. Music-therapy analyzed through conceptual mapping

    NASA Astrophysics Data System (ADS)

    Martinez, Rodolfo; de la Fuente, Rebeca

    2002-11-01

    Conceptual maps have been employed lately as a learning tool, as a modern study technique, and as a new way to understand intelligence, which allows for the development of a strong theoretical reference, in order to prove the research hypothesis. This paper presents a music-therapy analysis based on this tool to produce a conceptual mapping network, which ranges from magic through the rigor of the hard sciences.

  3. Science Teachers' Use of a Concept Map Marking Guide as a Formative Assessment Tool for the Concept of Energy

    ERIC Educational Resources Information Center

    Won, Mihye; Krabbe, Heiko; Ley, Siv Ling; Treagust, David F.; Fischer, Hans E.

    2017-01-01

    In this study, we investigated the value of a concept map marking guide as an alternative formative assessment tool for science teachers to adopt for the topic of energy. Eight high school science teachers marked students' concept maps using an itemized holistic marking guide. Their marking was compared with the researchers' marking and the scores…

  4. Mapping, Awareness, And Virtualization Network Administrator Training Tool Virtualization Module

    DTIC Science & Technology

    2016-03-01

    AND VIRTUALIZATION NETWORK ADMINISTRATOR TRAINING TOOL VIRTUALIZATION MODULE by Erik W. Berndt March 2016 Thesis Advisor: John Gibson...REPORT TYPE AND DATES COVERED Master’s thesis 4. TITLE AND SUBTITLE MAPPING, AWARENESS, AND VIRTUALIZATION NETWORK ADMINISTRATOR TRAINING TOOL... VIRTUALIZATION MODULE 5. FUNDING NUMBERS 6. AUTHOR(S) Erik W. Berndt 7. PERFORMING ORGANIZATION NAME(S) AND ADDRESS(ES) Naval Postgraduate School

  5. Mapping healthcare systems: a policy relevant analytic tool

    PubMed Central

    Sekhri Feachem, Neelam; Afshar, Ariana; Pruett, Cristina; Avanceña, Anton L.V.

    2017-01-01

    Abstract Background In the past decade, an international consensus on the value of well-functioning systems has driven considerable health systems research. This research falls into two broad categories. The first provides conceptual frameworks that take complex healthcare systems and create simplified constructs of interactions and functions. The second focuses on granular inputs and outputs. This paper presents a novel translational mapping tool – the University of California, San Francisco mapping tool (the Tool) - which bridges the gap between these two areas of research, creating a platform for multi-country comparative analysis. Methods Using the Murray-Frenk framework, we create a macro-level representation of a country's structure, focusing on how it finances and delivers healthcare. The map visually depicts the fundamental policy questions in healthcare system design: funding sources and amount spent through each source, purchasers, populations covered, provider categories; and the relationship between these entities. Results We use the Tool to provide a macro-level comparative analysis of the structure of India's and Thailand's healthcare systems. Conclusions As part of the systems strengthening arsenal, the Tool can stimulate debate about the merits and consequences of different healthcare systems structural designs, using a common framework that fosters multi-country comparative analyses. PMID:28541518

  6. A software tool for rapid flood inundation mapping

    USGS Publications Warehouse

    Verdin, James; Verdin, Kristine; Mathis, Melissa L.; Magadzire, Tamuka; Kabuchanga, Eric; Woodbury, Mark; Gadain, Hussein

    2016-06-02

    The GIS Flood Tool (GFT) was developed by the U.S. Geological Survey with support from the U.S. Agency for International Development’s Office of U.S. Foreign Disaster Assistance to provide a means for production of reconnaissance-level flood inundation mapping for data-sparse and resource-limited areas of the world. The GFT has also attracted interest as a tool for rapid assessment flood inundation mapping for the Flood Inundation Mapping Program of the U.S. Geological Survey. The GFT can fill an important gap for communities that lack flood inundation mapping by providing a first-estimate of inundation zones, pending availability of resources to complete an engineering study. The tool can also help identify priority areas for application of scarce flood inundation mapping resources. The technical basis of the GFT is an application of the Manning equation for steady flow in an open channel, operating on specially processed digital elevation data. The GFT is implemented as a software extension in ArcGIS. Output maps from the GFT were validated at 11 sites with inundation maps produced previously by the Flood Inundation Mapping Program using standard one-dimensional hydraulic modeling techniques. In 80 percent of the cases, the GFT inundation patterns matched 75 percent or more of the one-dimensional hydraulic model inundation patterns. Lower rates of pattern agreement were seen at sites with low relief and subtle surface water divides. Although the GFT is simple to use, it should be applied with the oversight or review of a qualified hydraulic engineer who understands the simplifying assumptions of the approach.

  7. Locating Sequence on FPC Maps and Selecting a Minimal Tiling Path

    PubMed Central

    Engler, Friedrich W.; Hatfield, James; Nelson, William; Soderlund, Carol A.

    2003-01-01

    This study discusses three software tools, the first two aid in integrating sequence with an FPC physical map and the third automatically selects a minimal tiling path given genomic draft sequence and BAC end sequences. The first tool, FSD (FPC Simulated Digest), takes a sequenced clone and adds it back to the map based on a fingerprint generated by an in silico digest of the clone. This allows verification of sequenced clone positions and the integration of sequenced clones that were not originally part of the FPC map. The second tool, BSS (Blast Some Sequence), takes a query sequence and positions it on the map based on sequence associated with the clones in the map. BSS has multiple uses as follows: (1) When the query is a file of marker sequences, they can be added as electronic markers. (2) When the query is draft sequence, the results of BSS can be used to close gaps in a sequenced clone or the physical map. (3) When the query is a sequenced clone and the target is BAC end sequences, one may select the next clone for sequencing using both sequence comparison results and map location. (4) When the query is whole-genome draft sequence and the target is BAC end sequences, the results can be used to select many clones for a minimal tiling path at once. The third tool, pickMTP, automates the majority of this last usage of BSS. Results are presented using the rice FPC map, BAC end sequences, and whole-genome shotgun from Syngenta. PMID:12915486

  8. KinMap: a web-based tool for interactive navigation through human kinome data.

    PubMed

    Eid, Sameh; Turk, Samo; Volkamer, Andrea; Rippmann, Friedrich; Fulle, Simone

    2017-01-05

    Annotations of the phylogenetic tree of the human kinome is an intuitive way to visualize compound profiling data, structural features of kinases or functional relationships within this important class of proteins. The increasing volume and complexity of kinase-related data underlines the need for a tool that enables complex queries pertaining to kinase disease involvement and potential therapeutic uses of kinase inhibitors. Here, we present KinMap, a user-friendly online tool that facilitates the interactive navigation through kinase knowledge by linking biochemical, structural, and disease association data to the human kinome tree. To this end, preprocessed data from freely-available sources, such as ChEMBL, the Protein Data Bank, and the Center for Therapeutic Target Validation platform are integrated into KinMap and can easily be complemented by proprietary data. The value of KinMap will be exemplarily demonstrated for uncovering new therapeutic indications of known kinase inhibitors and for prioritizing kinases for drug development efforts. KinMap represents a new generation of kinome tree viewers which facilitates interactive exploration of the human kinome. KinMap enables generation of high-quality annotated images of the human kinome tree as well as exchange of kinome-related data in scientific communications. Furthermore, KinMap supports multiple input and output formats and recognizes alternative kinase names and links them to a unified naming scheme, which makes it a useful tool across different disciplines and applications. A web-service of KinMap is freely available at http://www.kinhub.org/kinmap/ .

  9. Automated mapping of clinical terms into SNOMED-CT. An application to codify procedures in pathology.

    PubMed

    Allones, J L; Martinez, D; Taboada, M

    2014-10-01

    Clinical terminologies are considered a key technology for capturing clinical data in a precise and standardized manner, which is critical to accurately exchange information among different applications, medical records and decision support systems. An important step to promote the real use of clinical terminologies, such as SNOMED-CT, is to facilitate the process of finding mappings between local terms of medical records and concepts of terminologies. In this paper, we propose a mapping tool to discover text-to-concept mappings in SNOMED-CT. Name-based techniques were combined with a query expansion system to generate alternative search terms, and with a strategy to analyze and take advantage of the semantic relationships of the SNOMED-CT concepts. The developed tool was evaluated and compared to the search services provided by two SNOMED-CT browsers. Our tool automatically mapped clinical terms from a Spanish glossary of procedures in pathology with 88.0% precision and 51.4% recall, providing a substantial improvement of recall (28% and 60%) over other publicly accessible mapping services. The improvements reached by the mapping tool are encouraging. Our results demonstrate the feasibility of accurately mapping clinical glossaries to SNOMED-CT concepts, by means a combination of structural, query expansion and named-based techniques. We have shown that SNOMED-CT is a great source of knowledge to infer synonyms for the medical domain. Results show that an automated query expansion system overcomes the challenge of vocabulary mismatch partially.

  10. KSC-02pp0465

    NASA Image and Video Library

    2002-04-08

    KENNEDY SPACE CENTER, FLA. -- Launch! Birds in the foreground seem oblivious to the fire and smoke as Space Shuttle Atlantis roars into the sky on mission STS-110. Liftoff occurred at 4:44:19 p.m. EDT (20:41:19 GMT). Carrying the S0 Integrated Truss Structure and Mobile Transporter, STS-110 is the 13th assembly flight to the International Space Station

  11. Earth Observations taken by the Expedition Seven crew

    NASA Image and Video Library

    2003-07-15

    ISS007-E-10239 (15 July 2003) --- The crew of the International Space Station had a great seat from which to observe tropical storm Claudette as she turned into a hurricane and came ashore with high winds and heavy rains that drenched their Houston home base and other Texas areas. This digital image was recorded at 13:25:10 GMT, July 15, 2003.

  12. Earth Observations taken by the Expedition Seven crew

    NASA Image and Video Library

    2003-07-15

    ISS007-E-10246 (15 July 2003) --- The crew of the International Space Station had a great seat from which to observe tropical storm Claudette as she turned into a hurricane and came ashore with high winds and heavy rains that drenched their Houston home base and other Texas areas. This digital image was recorded at 13:26:54 GMT, July 15, 2003

  13. Earth Observations taken by the Expedition Seven crew

    NASA Image and Video Library

    2003-07-15

    ISS007-E-10245 (15 July 2003) --- The crew of the International Space Station had a great seat from which to observe tropical storm Claudette as she turned into a hurricane and came ashore with high winds and heavy rains that drenched their Houston home base and other Texas areas. This digital image was recorded at 13:26:41 GMT, July 15, 2003

  14. View of the ISS stack as seen during the fly-around by the STS-96 crew

    NASA Image and Video Library

    2017-04-20

    S96-E-5218 (3 June 1999) --- Partially silhouetted over clouds and a wide expanse of ocean waters, the unmanned International Space Station (ISS) moves away from the Space Shuttle Discovery. An electronic still camera (ESC) was aimed through aft flight deck windows to capture the image at 23:01:00 GMT, June 3, 1999.

  15. Armstrong, Neil Alden (1930-)

    NASA Astrophysics Data System (ADS)

    Murdin, P.

    2000-11-01

    Astronaut, born in Auglaize County, OH, trained as a pilot (Korean War). He flew on Gemini 8 and in 1969, with Michael Collins and EDWIN ALDRIN, took Apollo 11 to the Moon. On 21 July 1969, at 02:56 GMT, Armstrong became the first man to walk on the Moon, with the famous statement, 'That's one small step for a man, one giant leap for mankind'....

  16. Translations on Latin America, Number 1568.

    DTIC Science & Technology

    1976-11-10

    Culture Ethnology Technological Geography 17b. Identifiers/Open-Ended Terms Inter-American Affairs x Argentina x Bolivia Brazil x Chile ...Imports (Brasilia Domestic Service, 25 Oct 76) 23 CHILE CUBA Carabineros Release Communique on Macul Shooting (Santiago Radio Mineria, 21 Oct...Governor Faria Lima. CSO: 3001 23 CHILE CARABINEROS RELEASE COMMUNIQUE ON MACUL SHOOTING Santiago Radio Mineria Network in Spanish I63O GMT 21

  17. Glenn in his sleep rack on the Discovery's middeck

    NASA Image and Video Library

    1998-10-29

    STS095-E-5032 (10-29-98) --- During Flight Day 1 activties, U.S. Sen. John H. Glenn Jr. takes part in his assigned medical studies as a payload specialist onboard the Space Shuttle Discovery. A flashlight floats in front of Sen. Glenn. The photo was made with an electronic still camera (ESC) at ll:48:35 GMT, Oct. 29.

  18. Southeast Asia Report.

    DTIC Science & Technology

    1984-03-08

    Fatherland Construction Bonds (DAI DOAN KET, 4 Jan 84) ...,-. 60 AGRICULTURE Thanh Hoa Province Reports Self -Sufficiency in Grain for Nearly 3...Years (Luong Ngoc Bich; NHAN DAN, 6 Jan 84) 63 Ministry Official Discusses Agricultural Self -Sufficiency (M. Dunin-Wasowicz...off for the day at 2030 [1330 GMT] we will rebroadcast reports from the battlefields. All our esteemed and beloved compatriots and comrades-in-arms

  19. PANSAT satellite deployment from STS-95 Discovery's payload bay

    NASA Image and Video Library

    1998-10-30

    STS095-E-5040 (30 Oct. 1998) --- PANSAT, a nonrecoverable satellite developed by the Naval Postgraduate School (NPS) in Monterey, California, is deployed from the cargo bay of the Earth-orbiting Space Shuttle Discovery. The small ball-shaped payload is basically a tiny telecommunications satellite. The photo was recorded with an electronic still camera (ESC) at 1:49:13 GMT, Oct. 30.

  20. Hypocenter for the 1979 Imperial Valley Earthquake

    USGS Publications Warehouse

    Archuleta, Ralph J.

    1982-01-01

    Using P-and S-wave arrival times with the laterally varying P-wave velocity structure derived from analysis of a refraction survey of the Imperial Valley, a hypocenter is ascertained for the October 15, 1979, Imperial Valley earthquake: Latitude 32° 39.50′N, Longitude 115° 19.80′W, Depth 8.0 km, Time 23:16:54.40 GMT.

  1. Korean Affairs Report

    DTIC Science & Technology

    1985-09-06

    Cameroonian Delegation 132 Diplomatic Corps Present Bouquet 132 Peruvian Communist Party Leader 132 Foreign Diplomats Lay Wreaths 132 Support for...working people in Wonsan, soldiers of the Korean People’s Army and the Soviet sailors took place. Friendship football and volleyball matches took...basket of flowers to an official concerned. [Text] [Pyongyang KCNA in English 1556 GMT 14 Aug 85] PERUVIAN COMMUNIST PARTY LEADER—Pyongyang, 15

  2. Opto-mechanical design of the G-CLEF flexure control camera system

    NASA Astrophysics Data System (ADS)

    Oh, Jae Sok; Park, Chan; Kim, Jihun; Kim, Kang-Min; Chun, Moo-Young; Yu, Young Sam; Lee, Sungho; Nah, Jakyoung; Park, Sung-Joon; Szentgyorgyi, Andrew; McMuldroch, Stuart; Norton, Timothy; Podgorski, William; Evans, Ian; Mueller, Mark; Uomoto, Alan; Crane, Jeffrey; Hare, Tyson

    2016-08-01

    The GMT-Consortium Large Earth Finder (G-CLEF) is the very first light instrument of the Giant Magellan Telescope (GMT). The G-CLEF is a fiber feed, optical band echelle spectrograph that is capable of extremely precise radial velocity measurement. KASI (Korea Astronomy and Space Science Institute) is responsible for Flexure Control Camera (FCC) included in the G-CLEF Front End Assembly (GCFEA). The FCC is a kind of guide camera, which monitors the field images focused on a fiber mirror to control the flexure and the focus errors within the GCFEA. The FCC consists of five optical components: a collimator including triple lenses for producing a pupil, neutral density filters allowing us to use much brighter star as a target or a guide, a tent prism as a focus analyzer for measuring the focus offset at the fiber mirror, a reimaging camera with three pair of lenses for focusing the beam on a CCD focal plane, and a CCD detector for capturing the image on the fiber mirror. In this article, we present the optical and mechanical FCC designs which have been modified after the PDR in April 2015.

  3. Prototype Development of the GMT Fast Steering Mirror

    NASA Astrophysics Data System (ADS)

    Kim, Young-Soo; Koh, J.; Jung, H.; Jung, H.; Cho, M. K.; Park, W.; Yang, H.; Kim, H.; Lee, K.; Ahn, H.; Park, B.

    2013-06-01

    A Fast Steering Mirror (FSM) is going to be produced as a secondary mirror of the Giant Magellan Telescope (GMT). FSM is 3.2 m in diameter and the focal ratio is 0.65. It is composed of seven circular segments which match with the primary mirror segments. Each segment contains a light-weighted mirror whose diameter is 1.1 m. It also contains tip-tilt actuators which would compensate wind effect and structure jitter. An FSM prototype (FSMP) has been developed, which consists of a full-size off-axis mirror segment and a tip-tilt test-bed. The main purpose of the FSMP development is to achieve key technologies, such as fabrication of highly aspheric off-axis mirror and tip-tilt actuation. The development has been conducted by a consortium of five institutions in Korea and USA, and led by Korea Astronomy and Space Science Institute. The mirror was light-weighted and grinding of the front surface was finished. Polishing is in progress with computer generated hologram tests. The tip-tilt test-bed has been manufactured and assembled. Frequency tests are being performed and optical tilt set-up is arranged for visual demonstration. In this paper, we present progress of the prototype development, and future works.

  4. The Immunogenicity and Safety of CYD-Tetravalent Dengue Vaccine (CYD-TDV) in Children and Adolescents: A Systematic Review.

    PubMed

    Agarwal, Raksheeth; Wahid, Mardiastuti H; Yausep, Oliver E; Angel, Sharon H; Lokeswara, Angga W

    2017-01-01

    to assess the immunogenicity and safety of CYD-tetravalent dengue vaccine (CYD-TDV) in children. comprehensive literature searches were conducted on various databases. Randomized-controlled trials on children with CYD-TDV as intervention were selected based on inclusion and exclusion criteria. Data extracted from selected trials included safety of vaccine and immunogenicity in terms of Geometric Mean Titres (GMT) of antibodies.   six clinical trials were selected based on preset criteria. GMT values were obtained using 50% Plaque Reduction Neutralization Test (PRNT) and safety was semi-quantitatively assessed based on adverse effects. Additional data processing was done to obtain a better understanding on the trends among the studies. The results showed that the groups vaccinated with CYD-TDV showed higher immunogenicity against dengue virus antigens than the control groups. Safety results were satisfactory in all trials, and most severe side effects were unrelated to the vaccine. CYD-TDV is both effective and safe for patients in endemic regions. This gives promise for further development and large-scale research on this vaccine to assess its efficacy in decreasing dengue prevalence, and its pervasive implementation in endemic countries, such as Indonesia.

  5. PepMapper: a collaborative web tool for mapping epitopes from affinity-selected peptides.

    PubMed

    Chen, Wenhan; Guo, William W; Huang, Yanxin; Ma, Zhiqiang

    2012-01-01

    Epitope mapping from affinity-selected peptides has become popular in epitope prediction, and correspondingly many Web-based tools have been developed in recent years. However, the performance of these tools varies in different circumstances. To address this problem, we employed an ensemble approach to incorporate two popular Web tools, MimoPro and Pep-3D-Search, together for taking advantages offered by both methods so as to give users more options for their specific purposes of epitope-peptide mapping. The combined operation of Union finds as many associated peptides as possible from both methods, which increases sensitivity in finding potential epitopic regions on a given antigen surface. The combined operation of Intersection achieves to some extent the mutual verification by the two methods and hence increases the likelihood of locating the genuine epitopic region on a given antigen in relation to the interacting peptides. The Consistency between Intersection and Union is an indirect sufficient condition to assess the likelihood of successful peptide-epitope mapping. On average from 27 tests, the combined operations of PepMapper outperformed either MimoPro or Pep-3D-Search alone. Therefore, PepMapper is another multipurpose mapping tool for epitope prediction from affinity-selected peptides. The Web server can be freely accessed at: http://informatics.nenu.edu.cn/PepMapper/

  6. Learning to merge: a new tool for interactive mapping

    NASA Astrophysics Data System (ADS)

    Porter, Reid B.; Lundquist, Sheng; Ruggiero, Christy

    2013-05-01

    The task of turning raw imagery into semantically meaningful maps and overlays is a key area of remote sensing activity. Image analysts, in applications ranging from environmental monitoring to intelligence, use imagery to generate and update maps of terrain, vegetation, road networks, buildings and other relevant features. Often these tasks can be cast as a pixel labeling problem, and several interactive pixel labeling tools have been developed. These tools exploit training data, which is generated by analysts using simple and intuitive paint-program annotation tools, in order to tailor the labeling algorithm for the particular dataset and task. In other cases, the task is best cast as a pixel segmentation problem. Interactive pixel segmentation tools have also been developed, but these tools typically do not learn from training data like the pixel labeling tools do. In this paper we investigate tools for interactive pixel segmentation that also learn from user input. The input has the form of segment merging (or grouping). Merging examples are 1) easily obtained from analysts using vector annotation tools, and 2) more challenging to exploit than traditional labels. We outline the key issues in developing these interactive merging tools, and describe their application to remote sensing.

  7. GDR (Genome Database for Rosaceae): integrated web-database for Rosaceae genomics and genetics data

    PubMed Central

    Jung, Sook; Staton, Margaret; Lee, Taein; Blenda, Anna; Svancara, Randall; Abbott, Albert; Main, Dorrie

    2008-01-01

    The Genome Database for Rosaceae (GDR) is a central repository of curated and integrated genetics and genomics data of Rosaceae, an economically important family which includes apple, cherry, peach, pear, raspberry, rose and strawberry. GDR contains annotated databases of all publicly available Rosaceae ESTs, the genetically anchored peach physical map, Rosaceae genetic maps and comprehensively annotated markers and traits. The ESTs are assembled to produce unigene sets of each genus and the entire Rosaceae. Other annotations include putative function, microsatellites, open reading frames, single nucleotide polymorphisms, gene ontology terms and anchored map position where applicable. Most of the published Rosaceae genetic maps can be viewed and compared through CMap, the comparative map viewer. The peach physical map can be viewed using WebFPC/WebChrom, and also through our integrated GDR map viewer, which serves as a portal to the combined genetic, transcriptome and physical mapping information. ESTs, BACs, markers and traits can be queried by various categories and the search result sites are linked to the mapping visualization tools. GDR also provides online analysis tools such as a batch BLAST/FASTA server for the GDR datasets, a sequence assembly server and microsatellite and primer detection tools. GDR is available at http://www.rosaceae.org. PMID:17932055

  8. iMindMap as an Innovative Tool in Teaching and Learning Accounting: An Exploratory Study

    ERIC Educational Resources Information Center

    Wan Jusoh, Wan Noor Hazlina; Ahmad, Suraya

    2016-01-01

    Purpose: The purpose of this study is to explore the use of iMindMap software as an interactive tool in the teaching and learning method and also to be able to consider iMindMap as an alternative instrument in achieving the ultimate learning outcome. Design/Methodology/Approach: Out of 268 students of the management accounting at the University of…

  9. Knowledge Mapping: A Multipurpose Task Analysis Tool.

    ERIC Educational Resources Information Center

    Esque, Timm J.

    1988-01-01

    Describes knowledge mapping, a tool developed to increase the objectivity and accuracy of task difficulty ratings for job design. Application in a semiconductor manufacturing environment is discussed, including identifying prerequisite knowledge for a given task; establishing training development priorities; defining knowledge levels; identifying…

  10. Study of Tools for Network Discovery and Network Mapping

    DTIC Science & Technology

    2003-11-01

    connected to the switch. iv. Accessibility of historical data and event data In general, network discovery tools keep a history of the collected...has the following software dependencies: - Java Virtual machine 76 - Perl modules - RRD Tool - TomCat - PostgreSQL STRENGTHS AND...systems - provide a simple view of the current network status - generate alarms on status change - generate history of status change VISUAL MAP

  11. Artificial Intelligence-Based Student Learning Evaluation: A Concept Map-Based Approach for Analyzing a Student's Understanding of a Topic

    ERIC Educational Resources Information Center

    Jain, G. Panka; Gurupur, Varadraj P.; Schroeder, Jennifer L.; Faulkenberry, Eileen D.

    2014-01-01

    In this paper, we describe a tool coined as artificial intelligence-based student learning evaluation tool (AISLE). The main purpose of this tool is to improve the use of artificial intelligence techniques in evaluating a student's understanding of a particular topic of study using concept maps. Here, we calculate the probability distribution of…

  12. Regional Geological Mapping in the Graham Land of Antarctic Peninsula Using LANDSAT-8 Remote Sensing Data

    NASA Astrophysics Data System (ADS)

    Pour, A. B.; Hashim, M.; Park, Y.

    2017-10-01

    Geological investigations in Antarctica confront many difficulties due to its remoteness and extreme environmental conditions. In this study, the applications of Landsat-8 data were investigated to extract geological information for lithological and alteration mineral mapping in poorly exposed lithologies in inaccessible domains such in Antarctica. The north-eastern Graham Land, Antarctic Peninsula (AP) was selected in this study to conduct a satellite-based remote sensing mapping technique. Continuum Removal (CR) spectral mapping tool and Independent Components Analysis (ICA) were applied to Landsat-8 spectral bands to map poorly exposed lithologies at regional scale. Pixels composed of distinctive absorption features of alteration mineral assemblages associated with poorly exposed lithological units were detected by applying CR mapping tool to VNIR and SWIR bands of Landsat-8.Pixels related to Si-O bond emission minima features were identified using CR mapping tool to TIR bands in poorly mapped andunmapped zones in north-eastern Graham Land at regional scale. Anomaly pixels in the ICA image maps related to spectral featuresof Al-O-H, Fe, Mg-O-H and CO3 groups and well-constrained lithological attributions from felsic to mafic rocks were detectedusing VNIR, SWIR and TIR datasets of Landsat-8. The approach used in this study performed very well for lithological andalteration mineral mapping with little available geological data or without prior information of the study region.

  13. Enhanced STEM Learning with the GeoMapApp Data Exploration Tool

    NASA Astrophysics Data System (ADS)

    Goodwillie, A. M.

    2014-12-01

    GeoMapApp (http://www.geomapapp.org), is a free, map-based data discovery and visualisation tool developed with NSF funding at Lamont-Doherty Earth Observatory. GeoMapApp provides casual and specialist users alike with access to hundreds of built-in geoscience data sets covering geology, geophysics, geochemistry, oceanography, climatology, cryospherics, and the environment. Users can also import their own data tables, spreadsheets, shapefiles, grids and images. Simple manipulation and analysis tools combined with layering capabilities and engaging visualisations provide a powerful platform with which to explore and interrogate geoscience data in its proper geospatial context thus helping users to more easily gain insight into the meaning of the data. A global elevation base map covering the oceans as well as continents forms the backbone of GeoMapApp. The multi-resolution base map is updated regularly and includes data sources ranging from Space Shuttle elevation data for land areas to ultra-high-resolution surveys of coral reefs and seafloor hydrothermal vent fields. Examples of built-in data sets that can be layered over the elevation model include interactive earthquake and volcano data, plate tectonic velocities, hurricane tracks, land and ocean temperature, water column properties, age of the ocean floor, and deep submersible bottom photos. A versatile profiling tool provides instant access to data cross-sections. Contouring and 3-D views are also offered - the attached image shows a 3-D view of East Africa's Ngorongoro Crater as an example. Tabular data - both imported and built-in - can be displayed in a variety of ways and a lasso tool enables users to quickly select data points directly from the map. A range of STEM-based education material based upon GeoMapApp is already available, including a number of self-contained modules for school- and college-level students (http://www.geomapapp.org/education/contributed_material.html). More learning modules are planned, such as one on the effects of sea-level rise. GeoMapApp users include students, teachers, researchers, curriculum developers and outreach specialists.

  14. YouGenMap: a web platform for dynamic multi-comparative mapping and visualization of genetic maps

    Treesearch

    Keith Batesole; Kokulapalan Wimalanathan; Lin Liu; Fan Zhang; Craig S. Echt; Chun Liang

    2014-01-01

    Comparative genetic maps are used in examination of genome organization, detection of conserved gene order, and exploration of marker order variations. YouGenMap is an open-source web tool that offers dynamic comparative mapping capability of users' own genetic mapping between 2 or more map sets. Users' genetic map data and optional gene annotations are...

  15. Evaluation of the User Strategy on 2d and 3d City Maps Based on Novel Scanpath Comparison Method and Graph Visualization

    NASA Astrophysics Data System (ADS)

    Dolezalova, J.; Popelka, S.

    2016-06-01

    The paper is dealing with scanpath comparison of eye-tracking data recorded during case study focused on the evaluation of 2D and 3D city maps. The experiment contained screenshots from three map portals. Two types of maps were used - standard map and 3D visualization. Respondents' task was to find particular point symbol on the map as fast as possible. Scanpath comparison is one group of the eye-tracking data analyses methods used for revealing the strategy of the respondents. In cartographic studies, the most commonly used application for scanpath comparison is eyePatterns that output is hierarchical clustering and a tree graph representing the relationships between analysed sequences. During an analysis of the algorithm generating a tree graph, it was found that the outputs do not correspond to the reality. We proceeded to the creation of a new tool called ScanGraph. This tool uses visualization of cliques in simple graphs and is freely available at www.eyetracking.upol.cz/scangraph. Results of the study proved the functionality of the tool and its suitability for analyses of different strategies of map readers. Based on the results of the tool, similar scanpaths were selected, and groups of respondents with similar strategies were identified. With this knowledge, it is possible to analyse the relationship between belonging to the group with similar strategy and data gathered from the questionnaire (age, sex, cartographic knowledge, etc.) or type of stimuli (2D, 3D map).

  16. MapFactory - Towards a mapping design pattern for big geospatial data

    NASA Astrophysics Data System (ADS)

    Rautenbach, Victoria; Coetzee, Serena

    2018-05-01

    With big geospatial data emerging, cartographers and geographic information scientists have to find new ways of dealing with the volume, variety, velocity, and veracity (4Vs) of the data. This requires the development of tools that allow processing, filtering, analysing, and visualising of big data through multidisciplinary collaboration. In this paper, we present the MapFactory design pattern that will be used for the creation of different maps according to the (input) design specification for big geospatial data. The design specification is based on elements from ISO19115-1:2014 Geographic information - Metadata - Part 1: Fundamentals that would guide the design and development of the map or set of maps to be produced. The results of the exploratory research suggest that the MapFactory design pattern will help with software reuse and communication. The MapFactory design pattern will aid software developers to build the tools that are required to automate map making with big geospatial data. The resulting maps would assist cartographers and others to make sense of big geospatial data.

  17. LACO-Wiki: A land cover validation tool and a new, innovative teaching resource for remote sensing and the geosciences

    NASA Astrophysics Data System (ADS)

    See, Linda; Perger, Christoph; Dresel, Christopher; Hofer, Martin; Weichselbaum, Juergen; Mondel, Thomas; Steffen, Fritz

    2016-04-01

    The validation of land cover products is an important step in the workflow of generating a land cover map from remotely-sensed imagery. Many students of remote sensing will be given exercises on classifying a land cover map followed by the validation process. Many algorithms exist for classification, embedded within proprietary image processing software or increasingly as open source tools. However, there is little standardization for land cover validation, nor a set of open tools available for implementing this process. The LACO-Wiki tool was developed as a way of filling this gap, bringing together standardized land cover validation methods and workflows into a single portal. This includes the storage and management of land cover maps and validation data; step-by-step instructions to guide users through the validation process; sound sampling designs; an easy-to-use environment for validation sample interpretation; and the generation of accuracy reports based on the validation process. The tool was developed for a range of users including producers of land cover maps, researchers, teachers and students. The use of such a tool could be embedded within the curriculum of remote sensing courses at a university level but is simple enough for use by students aged 13-18. A beta version of the tool is available for testing at: http://www.laco-wiki.net.

  18. Bibliometric mapping: eight decades of analytical chemistry, with special focus on the use of mass spectrometry.

    PubMed

    Waaijer, Cathelijn J F; Palmblad, Magnus

    2015-01-01

    In this Feature we use automatic bibliometric mapping tools to visualize the history of analytical chemistry from the 1920s until the present. In particular, we have focused on the application of mass spectrometry in different fields. The analysis shows major shifts in research focus and use of mass spectrometry. We conclude by discussing the application of bibliometric mapping and visualization tools in analytical chemists' research.

  19. Three-dimensional mapping of the local interstellar medium with composite data

    NASA Astrophysics Data System (ADS)

    Capitanio, L.; Lallement, R.; Vergely, J. L.; Elyajouri, M.; Monreal-Ibero, A.

    2017-10-01

    Context. Three-dimensional maps of the Galactic interstellar medium are general astrophysical tools. Reddening maps may be based on the inversion of color excess measurements for individual target stars or on statistical methods using stellar surveys. Three-dimensional maps based on diffuse interstellar bands (DIBs) have also been produced. All methods benefit from the advent of massive surveys and may benefit from Gaia data. Aims: All of the various methods and databases have their own advantages and limitations. Here we present a first attempt to combine different datasets and methods to improve the local maps. Methods: We first updated our previous local dust maps based on a regularized Bayesian inversion of individual color excess data by replacing Hipparcos or photometric distances with Gaia Data Release 1 values when available. Secondly, we complemented this database with a series of ≃5000 color excess values estimated from the strength of the λ15273 DIB toward stars possessing a Gaia parallax. The DIB strengths were extracted from SDSS/APOGEE spectra. Third, we computed a low-resolution map based on a grid of Pan-STARRS reddening measurements by means of a new hierarchical technique and used this map as the prior distribution during the inversion of the two other datasets. Results: The use of Gaia parallaxes introduces significant changes in some areas and globally increases the compactness of the structures. Additional DIB-based data make it possible to assign distances to clouds located behind closer opaque structures and do not introduce contradictory information for the close structures. A more realistic prior distribution instead of a plane-parallel homogeneous distribution helps better define the structures. We validated the results through comparisons with other maps and with soft X-ray data. Conclusions: Our study demonstrates that the combination of various tracers is a potential tool for more accurate maps. An online tool makes it possible to retrieve maps and reddening estimations. Our online tool is available at http://stilism.obspm.fr

  20. PhosphOrtholog: a web-based tool for cross-species mapping of orthologous protein post-translational modifications.

    PubMed

    Chaudhuri, Rima; Sadrieh, Arash; Hoffman, Nolan J; Parker, Benjamin L; Humphrey, Sean J; Stöckli, Jacqueline; Hill, Adam P; James, David E; Yang, Jean Yee Hwa

    2015-08-19

    Most biological processes are influenced by protein post-translational modifications (PTMs). Identifying novel PTM sites in different organisms, including humans and model organisms, has expedited our understanding of key signal transduction mechanisms. However, with increasing availability of deep, quantitative datasets in diverse species, there is a growing need for tools to facilitate cross-species comparison of PTM data. This is particularly important because functionally important modification sites are more likely to be evolutionarily conserved; yet cross-species comparison of PTMs is difficult since they often lie in structurally disordered protein domains. Current tools that address this can only map known PTMs between species based on known orthologous phosphosites, and do not enable the cross-species mapping of newly identified modification sites. Here, we addressed this by developing a web-based software tool, PhosphOrtholog ( www.phosphortholog.com ) that accurately maps protein modification sites between different species. This facilitates the comparison of datasets derived from multiple species, and should be a valuable tool for the proteomics community. Here we describe PhosphOrtholog, a web-based application for mapping known and novel orthologous PTM sites from experimental data obtained from different species. PhosphOrtholog is the only generic and automated tool that enables cross-species comparison of large-scale PTM datasets without relying on existing PTM databases. This is achieved through pairwise sequence alignment of orthologous protein residues. To demonstrate its utility we apply it to two sets of human and rat muscle phosphoproteomes generated following insulin and exercise stimulation, respectively, and one publicly available mouse phosphoproteome following cellular stress revealing high mapping and coverage efficiency. Although coverage statistics are dataset dependent, PhosphOrtholog increased the number of cross-species mapped sites in all our example data sets by more than double when compared to those recovered using existing resources such as PhosphoSitePlus. PhosphOrtholog is the first tool that enables mapping of thousands of novel and known protein phosphorylation sites across species, accessible through an easy-to-use web interface. Identification of conserved PTMs across species from large-scale experimental data increases our knowledgebase of functional PTM sites. Moreover, PhosphOrtholog is generic being applicable to other PTM datasets such as acetylation, ubiquitination and methylation.

Top