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Sample records for marine coastal communities

  1. Short-term degradation of terrestrial DOM in the coastal ocean: Implications for nutrient subsidies and marine microbial community structure

    NASA Astrophysics Data System (ADS)

    Oliver, A. A.; Tank, S. E.; Kellogg, C.

    2015-12-01

    The export of riverine dissolved organic matter (DOM) to the coastal ocean provides an important link between terrestrial and aquatic ecosystems. The coastal temperate rainforests of British Columbia contain extensive freshwater networks that export significant amounts of water and DOM to the ocean, representing significant cross-system hydrologic and biogeochemical linkages. To better understand the importance of these linkages and implications for ecosystem structure and function, we used an experimental approach to investigate the role of microbial and photodegradation transformations of DOM exported from small coastal catchments to the marine environment. At two time periods (August 2014, March 2015), stream water from the outlets of two coastal watersheds was filtered (<0.2 μm), and treated with microbial inoculums from across a salinity gradient (i.e., freshwater, estuarine, and marine). Treatments were incubated in the ocean under light and dark conditions for 8 days. At 0, 3 and 8 days, samples were analyzed for DOC, TDN, DIN, and DON. Changes in DOM composition were determined with optical characterization techniques such as absorbance (SUVA, S, Sr) and fluorescence (EEM). Microbial community response was measured using cell counts and DNA/RNA amplicon sequencing to determine changes in bacterial abundance and community composition. General patterns indicated that microbial communities from the high salinity treatment (i.e. most marine) were the most effective at utilizing freshwater DOM, especially under light conditions. In some treatments, DOM appeared as a potential source of inorganic nitrogen with corresponding shifts in microbial community composition. Incubations using inoculum from low and mid salinity levels demonstrated smaller changes, indicating that DOM exported from these streams may not be extensively utilized until exposed to higher salinity environments further from stream outlets. These results suggest a role for terrestrial sourced

  2. Effect of physical sediments reworking on hydrocarbon degradation and bacterial community structure in marine coastal sediments.

    PubMed

    Duran, Robert; Bonin, Patricia; Jezequel, Ronan; Dubosc, Karine; Gassie, Claire; Terrisse, Fanny; Abella, Justine; Cagnon, Christine; Militon, Cecile; Michotey, Valérie; Gilbert, Franck; Cuny, Philippe; Cravo-Laureau, Cristiana

    2015-10-01

    The present study aimed to examine whether the physical reworking of sediments by harrowing would be suitable for favouring the hydrocarbon degradation in coastal marine sediments. Mudflat sediments were maintained in mesocosms under conditions as closer as possible to those prevailing in natural environments with tidal cycles. Sediments were contaminated with Ural blend crude oil, and in half of them, harrowing treatment was applied in order to mimic physical reworking of surface sediments. Hydrocarbon distribution within the sediment and its removal was followed during 286 days. The harrowing treatment allowed hydrocarbon compounds to penetrate the first 6 cm of the sediments, and biodegradation indexes (such as n-C18/phytane) indicated that biodegradation started 90 days before that observed in untreated control mesocosms. However, the harrowing treatment had a severe impact on benthic organisms reducing drastically the macrofaunal abundance and diversity. In the harrowing-treated mesocosms, the bacterial abundance, determined by 16S rRNA gene Q-PCR, was slightly increased; and terminal restriction fragment length polymorphism (T-RFLP) analyses of 16S rRNA genes showed distinct and specific bacterial community structure. Co-occurrence network and canonical correspondence analyses (CCA) based on T-RFLP data indicated the main correlations between bacterial operational taxonomic units (OTUs) as well as the associations between OTUs and hydrocarbon compound contents further supported by clustered correlation (ClusCor) analysis. The analyses highlighted the OTUs constituting the network structural bases involved in hydrocarbon degradation. Negative correlations indicated the possible shifts in bacterial communities that occurred during the ecological succession.

  3. Effect of physical sediments reworking on hydrocarbon degradation and bacterial community structure in marine coastal sediments.

    PubMed

    Duran, Robert; Bonin, Patricia; Jezequel, Ronan; Dubosc, Karine; Gassie, Claire; Terrisse, Fanny; Abella, Justine; Cagnon, Christine; Militon, Cecile; Michotey, Valérie; Gilbert, Franck; Cuny, Philippe; Cravo-Laureau, Cristiana

    2015-10-01

    The present study aimed to examine whether the physical reworking of sediments by harrowing would be suitable for favouring the hydrocarbon degradation in coastal marine sediments. Mudflat sediments were maintained in mesocosms under conditions as closer as possible to those prevailing in natural environments with tidal cycles. Sediments were contaminated with Ural blend crude oil, and in half of them, harrowing treatment was applied in order to mimic physical reworking of surface sediments. Hydrocarbon distribution within the sediment and its removal was followed during 286 days. The harrowing treatment allowed hydrocarbon compounds to penetrate the first 6 cm of the sediments, and biodegradation indexes (such as n-C18/phytane) indicated that biodegradation started 90 days before that observed in untreated control mesocosms. However, the harrowing treatment had a severe impact on benthic organisms reducing drastically the macrofaunal abundance and diversity. In the harrowing-treated mesocosms, the bacterial abundance, determined by 16S rRNA gene Q-PCR, was slightly increased; and terminal restriction fragment length polymorphism (T-RFLP) analyses of 16S rRNA genes showed distinct and specific bacterial community structure. Co-occurrence network and canonical correspondence analyses (CCA) based on T-RFLP data indicated the main correlations between bacterial operational taxonomic units (OTUs) as well as the associations between OTUs and hydrocarbon compound contents further supported by clustered correlation (ClusCor) analysis. The analyses highlighted the OTUs constituting the network structural bases involved in hydrocarbon degradation. Negative correlations indicated the possible shifts in bacterial communities that occurred during the ecological succession. PMID:25847440

  4. Metagenome Sequencing of a Coastal Marine Microbial Community from Monterey Bay, California

    PubMed Central

    Bryson, Sam; Kieft, Brandon; Li, Zhou; Pett-Ridge, Jennifer; Chavez, Francisco; Hettich, Robert L.; Pan, Chongle; Mayali, Xavier

    2015-01-01

    Heterotrophic microbes are critical components of aquatic food webs. Linkages between populations and the substrates they utilize are not well defined. We present the metagenome of microbial communities from the coastal Pacific Ocean exposed to various nutrient additions in order to better understand substrate utilization and partitioning in this environment. PMID:25931598

  5. How does EPA help to improve fisheries, marine life, and coastal communities?

    EPA Science Inventory

    The U.S. Environmental Protection Agency has several roles in protecting and restoring coastal habitats and communities – through policy, regulation, assistance, and research. The agency’s mandates and actions promote clean air and clean water, control uses and disposal of toxic ...

  6. Metagenome sequencing of a coastal marine microbial community from Monterey Bay, California

    DOE PAGES

    Mueller, R. S.; Bryson, S.; Keift, B.; Li, Zhou; Pett-Ridge, J.; Chavex, F.; Robert Hettich; Pan, Chongle; Mayali, X.

    2015-04-30

    Heterotrophic microbes are critical components of aquatic food webs. Linkages between populations and the substrates they utilize are not well defined. We present the metagenome of microbial communities from the coastal Pacific Ocean exposed to various nutrient additions in order to better understand substrate utilization and partitioning in this environment.

  7. Marine bacterioplankton diversity and community composition in an antarctic coastal environment.

    PubMed

    Lo Giudice, Angelina; Caruso, Consolazione; Mangano, Santina; Bruni, Vivia; De Domenico, Maria; Michaud, Luigi

    2012-01-01

    The bacterial community inhabiting the water column at Terra Nova Bay (Ross Sea, Antarctica) was examined by the fluorescent in situ hybridization (FISH) technique and the genotypic and phenotypic characterization of 606 bacterial isolates. Overall, the FISH analysis revealed a bacterioplankton composition that was typical of Antarctic marine environments with the Cytophaga/Flavobacter (CF) group of Bacteroidetes that was equally dominant with the Actinobacteria and Gammaproteobacteria. As sampling was performed during the decay of sea-ice, it is plausible to assume the origin of Bacteroidetes from the sea-ice compartment where they probably thrive in high concentration of DOM which is efficiently remineralized to inorganic nutrients. This finding was supported by the isolation of Gelidibacter, Polaribacter, and Psychroflexus members (generally well represented in Antarctic sea-ice) which showed the ability to hydrolyze macromolecules, probably through the production of extracellular enzymes. A consistently pronounced abundance of the Gammaproteobacteria (67.8%) was also detected within the cultivable fraction. Altogether, the genera Psychromonas and Pseudoalteromonas accounted for 65.4% of total isolates and were ubiquitous, thus suggesting that they may play a key role within the analyzed bacterioplankton community. In particular, Pseudoalteromonas isolates possessed nitrate reductase and were able to hydrolyze substrates for protease, esterase, and β-galactosidase, thus indicating their involvement in the carbon and nitrogen cycling. Finally, the obtained results highlight the ability of the Actinobacteria to survive and proliferate in the Terra Nova Bay seawater as they generally showed a wide range of salt tolerance and appeared to be particularly competitive with strictly marine bacteria by better utilizing supplied carbon sources. PMID:21748267

  8. Dynamics of marine bacterial community diversity of the coastal waters of the reefs, inlets, and wastewater outfalls of southeast Florida

    PubMed Central

    Campbell, Alexandra M; Fleisher, Jay; Sinigalliano, Christopher; White, James R; Lopez, Jose V

    2015-01-01

    Coastal waters adjacent to populated southeast Florida possess different habitats (reefs, oceanic inlets, sewage outfalls) that may affect the composition of their inherent microbiomes. To determine variation according to site, season, and depth, over the course of 1 year, we characterized the bacterioplankton communities within 38 nearshore seawater samples derived from the Florida Area Coastal Environment (FACE) water quality survey. Six distinct coastal locales were profiled – the Port Everglades and Hillsboro Inlets, Hollywood and Broward wastewater outfalls, and associated reef sites using culture-independent, high-throughput pyrosequencing of the 16S rRNA V4 region. More than 227,000 sequences helped describe longitudinal taxonomic profiles of marine bacteria and archaea. There were 4447 unique operational taxonomic units (OTUs) identified with a mean OTU count of 5986 OTUs across all sites. Bacterial taxa varied significantly by season and by site using weighted and unweighted Unifrac, but depth was only supported by weighted Unifrac, suggesting a change due to presence/absence of certain OTUs. Abundant microbial taxa across all samples included Synechococcus, Pelagibacteraceae, Bacteroidetes, and various Proteobacteria. Unifrac analysis confirmed significant differences at inlet sites relative to reef and outfalls. Inlet-based bacterioplankton significantly differed in greater abundances of Rhodobacteraceae and Cryomorphaceae, and depletion of SAR406 sequences. This study also found higher counts of Firmicutes, Chloroflexi, and wastewater associated SBR1093 bacteria at the outfall and reef sites compared to inlet sites. This study profiles local bacterioplankton populations in a much broader context, beyond culturing and quantitative PCR, and expands upon the work completed by the National Oceanic and Atmospheric Administration FACE program. PMID:25740409

  9. Dynamics of marine bacterial community diversity of the coastal waters of the reefs, inlets, and wastewater outfalls of southeast Florida.

    PubMed

    Campbell, Alexandra M; Fleisher, Jay; Sinigalliano, Christopher; White, James R; Lopez, Jose V

    2015-06-01

    Coastal waters adjacent to populated southeast Florida possess different habitats (reefs, oceanic inlets, sewage outfalls) that may affect the composition of their inherent microbiomes. To determine variation according to site, season, and depth, over the course of 1 year, we characterized the bacterioplankton communities within 38 nearshore seawater samples derived from the Florida Area Coastal Environment (FACE) water quality survey. Six distinct coastal locales were profiled - the Port Everglades and Hillsboro Inlets, Hollywood and Broward wastewater outfalls, and associated reef sites using culture-independent, high-throughput pyrosequencing of the 16S rRNA V4 region. More than 227,000 sequences helped describe longitudinal taxonomic profiles of marine bacteria and archaea. There were 4447 unique operational taxonomic units (OTUs) identified with a mean OTU count of 5986 OTUs across all sites. Bacterial taxa varied significantly by season and by site using weighted and unweighted Unifrac, but depth was only supported by weighted Unifrac, suggesting a change due to presence/absence of certain OTUs. Abundant microbial taxa across all samples included Synechococcus, Pelagibacteraceae, Bacteroidetes, and various Proteobacteria. Unifrac analysis confirmed significant differences at inlet sites relative to reef and outfalls. Inlet-based bacterioplankton significantly differed in greater abundances of Rhodobacteraceae and Cryomorphaceae, and depletion of SAR406 sequences. This study also found higher counts of Firmicutes, Chloroflexi, and wastewater associated SBR1093 bacteria at the outfall and reef sites compared to inlet sites. This study profiles local bacterioplankton populations in a much broader context, beyond culturing and quantitative PCR, and expands upon the work completed by the National Oceanic and Atmospheric Administration FACE program.

  10. Foraging depths of sea otters and implications to coastal marine communities

    USGS Publications Warehouse

    Bodkin, J.L.; Esslinger, G.G.; Monson, D.H.

    2004-01-01

    We visually observed 1,251 dives, of 14 sea otters instrumented with TDRs in southeast Alaska, and used attribute values from observed dives to classify 180,848 recorded dives as foraging (0.64), or traveling (0.36). Foraging dives were significantly deeper, with longer durations, bottom times, and postdive surface intervals, and greater descent and ascent rates, compared to traveling dives. Most foraging occurred in depths between 2 and 30 m (0.84), although 0.16 of all foraging was between 30 and 100 m. Nine animals, including all five males, demonstrated bimodal patterns in foraging depths, with peaks between 5 and 15 m and 30 and 60 m, whereas five of nine females foraged at an average depth of 10 m. Mean shallow foraging depth was 8 m, and mean deep foraging depth was 44 m. Maximum foraging depths averaged 61 m (54 and 82 for females and males, respectively) and ranged from 35 to 100 m. Female sea otters dove to depths 20 m on 0.85 of their foraging dives while male sea otters dove to depths 45 m on 0.50 of their foraging dives. Less than 0.02 of all foraging dives were >55 m, suggesting that effects of sea otter foraging on nearshore marine communities should diminish at greater depths. However, recolonization of vacant habitat by high densities of adult male sea otters may result in initial reductions of some prey species at depths >55 m.

  11. Marine Oxygen-Deficient Zones Harbor Depauperate Denitrifying Communities Compared to Novel Genetic Diversity in Coastal Sediments.

    PubMed

    Bowen, Jennifer L; Weisman, David; Yasuda, Michie; Jayakumar, Amal; Morrison, Hilary G; Ward, Bess B

    2015-08-01

    Denitrification is a critically important biogeochemical pathway that removes fixed nitrogen from ecosystems and thus ultimately controls the rate of primary production in nitrogen-limited systems. We examined the community structure of bacteria containing the nirS gene, a signature gene in the denitrification pathway, from estuarine and salt marsh sediments and from the water column of two of the world's largest marine oxygen-deficient zones (ODZs). We generated over 125,000 nirS gene sequences, revealing a large degree of genetic diversity including 1,815 unique taxa, the vast majority of which formed clades that contain no cultured representatives. These results underscore how little we know about the genetic diversity of metabolisms underlying this critical biogeochemical pathway. Marine sediments yielded 1,776 unique taxa when clustered at 95 % sequence identity, and there was no single nirS denitrifier that was a competitive dominant; different samples had different highly abundant taxa. By contrast, there were only 39 unique taxa identified in samples from the two ODZs, and 99 % of the sequences belonged to 5 or fewer taxa. The ODZ samples were often dominated by nirS sequences that shared a 92 % sequence identity to a nirS found in the anaerobic ammonium-oxidizing (anammox) genus Scalindua. This sequence was abundant in both ODZs, accounting for 38 and 59 % of all sequences, but it was virtually absent in marine sediments. Our data indicate that ODZs are remarkably depauperate in nirS genes compared to the remarkable genetic richness found in coastal sediments.

  12. USGS St. Petersburg Coastal and Marine Science Center

    USGS Publications Warehouse

    2011-01-01

    Extreme storms, sea-level rise, and the health of marine communities are some of the major societal and environmental issues impacting our Nation's marine and coastal realm. The U.S. Geological Survey (USGS) in St. Petersburg, Fla., investigates processes related to these ecosystems and the societal implications of natural hazards and resource sustainability. As one of three centers nationwide conducting research within the USGS Coastal and Marine Geology Program, the center is integral towards developing an understanding of physical processes that will contribute to rational decisions regarding the use and stewardship of national coastal and marine environments.

  13. Ecological effects of a major oil spill on Panamanian coastal marine communities

    SciTech Connect

    Jackson, J.B.C.; Cubit, J.D.; Keller, B.D.; Batista, V.; Burns, K.; Caffey, H.M.; Caldwell, R.L.; Garrity, S.D.; Getter, C.D.; Gonzalez, C.; Guzman, H.M.; Kaufmann, K.W.; Knap, A.H.; Levings, S.C.; Marshall, M.J.; Steger, R.; Thompson, R.C.; Weil, E. )

    1989-01-06

    In 1986 more than 8 million liters of crude oil spilled into a complex region of mangroves, seagrasses, and coral reefs just east of the Caribbean entrance to the Panama Canal. This was the largest recorded spill into coastal habitats in the tropical Americas. Many populations of plants and animals in both oiled and unoiled sites had been studied previously, thereby providing an unprecedented measure of ecological variation before the spill. Documentation of the spread of oil and its biological effects begun immediately. Intertidal mangroves, seagrasses, algae, and associated invertebrates were covered by oil and died soon after. More surprisingly, there was also extensive mortality of shallow subtidal reef corals and infauna of seagrass beds. After 1.5 years only some organisms in areas exposed to the open sea have recovered.

  14. Bacterioplankton: a sink for carbon in a coastal marine plankton community

    SciTech Connect

    Ducklow, H.W.; Purdie, D.A.; Williams, P.J.LeB.; Davis, J.M.

    1986-05-16

    Recent determinations of high production rates (up to 30% of primary production in surface waters) implicate free-living marine bacterioplankton as a link in a microbial loop that supplements phytoplankton as food for herbivores. An enclosed water column of 300 cubic meters was used to test the microbial loop hypothesis by following the fate of carbon-14-labeled bacterioplankton for over 50 days. Only 2% of the label initially fixed from carbon-14-labeled glucose by bacteria was present in larger organisms after 13 days, at which time about 20% of the total label added remained in the particulate fraction. Most of the label appeared to pass directly from particles smaller than 1 micrometer (heterotrophic bacterioplankton and some bacteriovores) to respired labeled carbon dioxide or to regenerated dissolved organic carbon-14. Secondary (and, by implication, primary) production by organisms smaller than 1 micrometer may not be an important food source in marine food chains. Bacterioplankton can be a sink for carbon in planktonic food webs and may serve principally as agents of nutrient regeneration rather than as food.

  15. USGS Western Coastal and Marine Geology Team

    USGS Publications Warehouse

    Johnson, Sam; Gibbons, Helen

    2007-01-01

    The Western Coastal and Marine Geology Team of the U.S. Geological Survey (USGS) studies the coasts of the western United States, including Alaska and Hawai‘i. Team scientists conduct research, monitor processes, and develop information about coastal and marine geologic hazards, environmental conditions, habitats, and energy and mineral resources. This information helps managers at all levels of government and in the private sector make informed decisions about the use and protection of national coastal and marine resources.

  16. Assessing anthropogenic pressures on coastal marine ecosystems using stable CNS isotopes: State of the art, knowledge gaps, and community-scale perspectives

    NASA Astrophysics Data System (ADS)

    Mancinelli, Giorgio; Vizzini, Salvatrice

    2015-04-01

    In recent decades, the analysis of carbon, nitrogen and sulfur stable isotopes (SIA) has emerged as a powerful, viable methodology for examining food web structure and dynamics, as well as addressing a number of applied issues. Here, we provide a state-of-the-art review of the use of SIA for assessing anthropogenic pressures on natural ecosystems, in order to establish current knowledge gaps and identify promising applications for evaluating the ecological status of marine coastal waters. Specifically, the potential of SIA to provide food web-scale indicators for estimating cumulative anthropogenic pressures is addressed. The review indicates that the methodology has been used for virtually the whole spectrum of human pressures known to influence marine ecosystems. However, only the effects of chemical pollution, release of dissolved and particulate nutrients, and invasive species have been extensively investigated. For the first two pressures, substantial efforts have been made to implement isotopic quantitative approaches and metrics for inter-system comparisons; however, with the exception of nutrient release, the majority of aquatic studies have been carried out in freshwater systems, and only limited information is available on marine environments. In particular, the effects of invasive species on coastal habitats have received scant attention. Trophic position of indicator species emerges as the isotopic metric most ubiquitously adopted for measuring the impact of anthropogenic pressures. Conversely, the application of other recently implemented metrics, proven to be highly effective in integrating information on the spatial-temporal dynamics of aquatic food webs, is to date still limited. The potential of stable isotope analysis to provide a unifying methodological-theoretical framework for effective, inter-ecosystem comparisons of both single and multiple anthropogenic pressures is emphasised. Additionally, a plea for the implementation and intercalibration

  17. The role of epibenthic predators in structuring the marine invertebrate community of a British coastal salt marsh

    NASA Astrophysics Data System (ADS)

    Frid, C. L. J.; James, R.

    The marine fauna of salt marshes are subjected to predation by birds, tidally feeding flatfish, crabs, prawns and small gobiid fish. The role of these epibenthic predators in structuring the community was investigated using cages to exclude predators. A range of designs of cages and partial cages was employed to control for artefacts due to caging, and sufficient cages were employed so that each cage was only sampled once to prevent the compounding of disturbance due to predation and sampling. Two mesh sizes were employed, a fine mesh excluding epibenthic predators and a coarse mesh allowing access by small crabs, prawns and gobiid fish but excluding birds and larger fish. The exclusion was maintained for 2 years. The presence of any experimental structure had a significant effect on the sedimentary regime within the cage. Epibentic predator exclusion let to an increase in infaunal predator density, but had no significant effect on the infaunal deposit feeders. There was some evidence that predators limit the surface deposit feeding gastropood Hydrobia ulvae during the winter. The gastropod Littorina littorea responded positively to the presence of any caging structure; this may be the result of changes in the availability of food, as the sides of a cage support a diatom flora which this species can exploit. The lack of a response from the infaunal deposit feeders is attributed to their horizontal mobility within the sediment. The possible interactions between epibenthic and infaunal predators are discussed.

  18. New marine community

    NASA Astrophysics Data System (ADS)

    While exploring the West Florida Escarpment, a steep slope in the Gulf of Mexico several hundred kilometers off the Florida coast, the deep submergence research vessel Alvin chanced upon a well-developed community of marine life akin to that found 7 years ago in the eastern Pacific Ocean.According to the Woods Hole Oceanographic Institution, which operates the submersible and its new tender, the Atlantis II (Eos, November 1, 1983, p. 619), the marine community contains large clams, mussels, crabs, fish, and tube worms like those found at hydrothermal vents in the eastern Pacific. While the east Pacific communities exist at spreading centers, the newly discovered group, which may stretch for almost 2 km at a depth of roughly 3200 km, lies in a passive continental margin. Also, whereas the water around the Pacific hydrothermal vents is much warmer than the surrounding seawater, the water around the new found community is apparently the same temperature as the ambient waters.

  19. Coastal Intelligence - A national infrastructure to support decision-making for coastal communities, economies and ecosystems

    NASA Astrophysics Data System (ADS)

    Weston, Neil D.

    2015-04-01

    The National Ocean Service (NOS), a Line Office within NOAA, is primarily responsible for fostering healthy and sustainable marine resources, habitats and ecosystems, strengthening the resiliency of communities, as well as being the nation's leader in observing, modeling and managing coastal, ocean and Great Lakes areas. NOS and numerous partners also play a critical role along the coasts and in marine ecosystems by providing science-based products and services to support a wide variety of applications. Coastal Intelligence however, goes one step further to support ecosystems, economies and communities by providing the infrastructure to integrate numerous observing systems and interpreting the scientific data into information that people can use. This poster will focus primarily on the science, observing systems and data modeling that support Coastal Intelligence and how accurate information can ensure timely and actionable decision-making for coastal communities and ecosystems.

  20. Diversity, community structure, and bioremediation potential of mercury-resistant marine bacteria of estuarine and coastal environments of Odisha, India.

    PubMed

    Dash, Hirak R; Das, Surajit

    2016-04-01

    Both point and non-point sources increase the pollution status of mercury and increase the population of mercury-resistant marine bacteria (MRMB). They can be targeted as the indicator organism to access marine mercury pollution, besides utilization in bioremediation. Thus, sediment and water samples were collected for 2 years (2010-2012) along Odisha coast of Bay of Bengal, India. Mercury content of the study sites varied from 0.47 to 0.99 ppb irrespective of the seasons of sampling. A strong positive correlation was observed between mercury content and MRMB population (P < 0.05) suggesting the utilization of these bacteria to assess the level of mercury pollution in the marine environment. Seventy-eight percent of the MRMB isolates were under the phylum Firmicutes, and 36 and 31% of them could resist mercury by mer operon-mediated volatilization and mercury biosorption, respectively. In addition, most of the isolates could resist a number of antibiotics and toxic metals. All the MRMB isolates possess the potential of growth and survival at cardinal pH (4-8), temperature (25-37 °C), and salinity (5-35 psu). Enterobacteria repetitive intergenic consensus (ERIC) and repetitive element palindromic PCR (REP-PCR) produced fingerprints corroborating the results of 16S rRNA gene sequencing. Fourier transform infrared (FTIR) spectral analysis also revealed strain-level speciation and phylogenetic relationships.

  1. Diversity, community structure, and bioremediation potential of mercury-resistant marine bacteria of estuarine and coastal environments of Odisha, India.

    PubMed

    Dash, Hirak R; Das, Surajit

    2016-04-01

    Both point and non-point sources increase the pollution status of mercury and increase the population of mercury-resistant marine bacteria (MRMB). They can be targeted as the indicator organism to access marine mercury pollution, besides utilization in bioremediation. Thus, sediment and water samples were collected for 2 years (2010-2012) along Odisha coast of Bay of Bengal, India. Mercury content of the study sites varied from 0.47 to 0.99 ppb irrespective of the seasons of sampling. A strong positive correlation was observed between mercury content and MRMB population (P < 0.05) suggesting the utilization of these bacteria to assess the level of mercury pollution in the marine environment. Seventy-eight percent of the MRMB isolates were under the phylum Firmicutes, and 36 and 31% of them could resist mercury by mer operon-mediated volatilization and mercury biosorption, respectively. In addition, most of the isolates could resist a number of antibiotics and toxic metals. All the MRMB isolates possess the potential of growth and survival at cardinal pH (4-8), temperature (25-37 °C), and salinity (5-35 psu). Enterobacteria repetitive intergenic consensus (ERIC) and repetitive element palindromic PCR (REP-PCR) produced fingerprints corroborating the results of 16S rRNA gene sequencing. Fourier transform infrared (FTIR) spectral analysis also revealed strain-level speciation and phylogenetic relationships. PMID:26686519

  2. The cost and feasibility of marine coastal restoration.

    PubMed

    Bayraktarov, Elisa; Saunders, Megan I; Abdullah, Sabah; Mills, Morena; Beher, Jutta; Possingham, Hugh P; Mumby, Peter J; Lovelock, Catherine E

    2016-06-01

    Land-use change in the coastal zone has led to worldwide degradation of marine coastal ecosystems and a loss of the goods and services they provide. Restoration is the process of assisting the recovery of an ecosystem that has been degraded, damaged, or destroyed and is critical for habitats where natural recovery is hindered. Uncertainties about restoration cost and feasibility can impede decisions on whether, what, how, where, and how much to restore. Here, we perform a synthesis of 235 studies with 954 observations from restoration or rehabilitation projects of coral reefs, seagrass, mangroves, salt-marshes, and oyster reefs worldwide, and evaluate cost, survival of restored organisms, project duration, area, and techniques applied. Findings showed that while the median and average reported costs for restoration of one hectare of marine coastal habitat were around US$80000 (2010) and US$1600000 (2010), respectively, the real total costs (median) are likely to be two to four times higher. Coral reefs and seagrass were among the most expensive ecosystems to restore. Mangrove restoration projects were typically the largest and the least expensive per hectare. Most marine coastal restoration projects were conducted in Australia, Europe, and USA, while total restoration costs were significantly (up to 30 times) cheaper in countries with developing economies. Community- or volunteer-based marine restoration projects usually have lower costs. Median survival of restored marine and coastal organisms, often assessed only within the first one to two years after restoration, was highest for saltmarshes (64.8%) and coral reefs (64.5%) and lowest for seagrass (38.0%). However, success rates reported in the scientific literature could be biased towards publishing successes rather than failures. The majority of restoration projects were short-lived and seldom reported monitoring costs. Restoration success depended primarily on the ecosystem, site selection, and techniques

  3. The concept of biotope in marine ecology and coastal management.

    PubMed

    Olenin, Sergej; Ducrotoy, Jean-Paul

    2006-01-01

    The term "biotope" was introduced by a German scientist, Dahl in 1908 as an addition to the concept of "biocenosis" earlier formulated by Möbius (1877). Initially it determined the physical-chemical conditions of existence of a biocenosis ("the biotope of a biocenosis"). Further, both biotope and biocenosis were respectively considered as abiotic and biotic parts of an ecosystem. This notion ("ecosystem = biotope + biocenosis") became accepted in German, French, Russian and other European "continental" ecological literature. The new interpretation of the term ("biotope = habitat + community") appeared in the United Kingdom in the early 1990s while classifying "marine habitats" of the coastal zone. Since then, this meaning was also used in international European environmental documents. This paper examines the evolution of the biotope notion. It is concluded that the contemporary concept is robust and may be used not only for the classification and mapping but also for functional marine ecology and coastal zone management. PMID:16600815

  4. Comparing marine and terrestrial ecosystems: Implications for the design of coastal marine reserves

    USGS Publications Warehouse

    Carr, M.H.; Neigel, J.E.; Estes, J.A.; Andelman, S.; Warner, R.R.; Largier, J. L.

    2003-01-01

    Concepts and theory for the design and application of terrestrial reserves is based on our understanding of environmental, ecological, and evolutionary processes responsible for biological diversity and sustainability of terrestrial ecosystems and how humans have influenced these processes. How well this terrestrial-based theory can be applied toward the design and application of reserves in the coastal marine environment depends, in part, on the degree of similarity between these systems. Several marked differences in ecological and evolutionary processes exist between marine and terrestrial ecosystems as ramifications of fundamental differences in their physical environments (i.e., the relative prevalence of air and water) and contemporary patterns of human impacts. Most notably, the great extent and rate of dispersal of nutrients, materials, holoplanktonic organisms, and reproductive propagules of benthic organisms expand scales of connectivity among near-shore communities and ecosystems. Consequently, the "openness" of marine populations, communities, and ecosystems probably has marked influences on their spatial, genetic, and trophic structures and dynamics in ways experienced by only some terrestrial species. Such differences appear to be particularly significant for the kinds of organisms most exploited and targeted for protection in coastal marine ecosystems (fishes and macroinvertebrates). These and other differences imply some unique design criteria and application of reserves in the marine environment. In explaining the implications of these differences for marine reserve design and application, we identify many of the environmental and ecological processes and design criteria necessary for consideration in the development of the analytical approaches developed elsewhere in this Special Issue.

  5. Comparison between Atlantic and Pacific Tropical Marine Coastal Ecosystems: Community Structure, Ecological Processes, and Productivity. Results and Scientific Papers of a Unesco/COMAR Workshop (Suva, Fiji, March 24-29, 1986). Unesco Reports in Marine Science 46.

    ERIC Educational Resources Information Center

    Birkeland, Charles, Ed.

    This report presents the Unesco workshop conclusions concerning important differences among tropical seas in terms of ecological processes in coastal marine ecosystems, and the corresponding implications for resource management guidelines. The conclusions result from the presentation and discussion of eight review papers which are included in this…

  6. Hyperspectral Imaging Sensors and the Marine Coastal Zone

    NASA Technical Reports Server (NTRS)

    Richardson, Laurie L.

    2000-01-01

    Hyperspectral imaging sensors greatly expand the potential of remote sensing to assess, map, and monitor marine coastal zones. Each pixel in a hyperspectral image contains an entire spectrum of information. As a result, hyperspectral image data can be processed in two very different ways: by image classification techniques, to produce mapped outputs of features in the image on a regional scale; and by use of spectral analysis of the spectral data embedded within each pixel of the image. The latter is particularly useful in marine coastal zones because of the spectral complexity of suspended as well as benthic features found in these environments. Spectral-based analysis of hyperspectral (AVIRIS) imagery was carried out to investigate a marine coastal zone of South Florida, USA. Florida Bay is a phytoplankton-rich estuary characterized by taxonomically distinct phytoplankton assemblages and extensive seagrass beds. End-member spectra were extracted from AVIRIS image data corresponding to ground-truth sample stations and well-known field sites. Spectral libraries were constructed from the AVIRIS end-member spectra and used to classify images using the Spectral Angle Mapper (SAM) algorithm, a spectral-based approach that compares the spectrum, in each pixel of an image with each spectrum in a spectral library. Using this approach different phytoplankton assemblages containing diatoms, cyanobacteria, and green microalgae, as well as benthic community (seagrasses), were mapped.

  7. Coastal and Marine Bird Data Base

    USGS Publications Warehouse

    Anderson, S.H.; Geissler, P.H.; Dawson, D.K.

    1980-01-01

    Summary: This report discusses the development of a coastal and marine bird data base at the Migratory Bird and Habitat Research Laboratory. The system is compared with other data bases, and suggestions for future development, such as possible adaptations for other taxonomic groups, are included. The data base is based on the Statistical Analysis System but includes extensions programmed in PL/I. The Appendix shows how the system evolved. Output examples are given for heron data and pelagic bird data which indicate the types of analyses that can be conducted and output figures. The Appendixes include a retrieval language user's guide and description of the retrieval process and listing of translator program.

  8. Mapping marine debris across coastal communities in Belize: developing a baseline for understanding the distribution of litter on beaches using geographic information systems.

    PubMed

    Bennett-Martin, Paulita; Visaggi, Christy C; Hawthorne, Timothy L

    2015-10-01

    Monitoring of marine debris (also known as marine litter) is an essential step in the process to eradicate ecological dangers in marine ecosystems caused by humans. This study examines marine debris in the Caribbean country of Belize using geographic information systems (GIS) to develop (1) a detailed data library for use on handheld Global Positioning System (GPS) units and tablets with mobile mapping applications for deployment in the field and (2) a freely available, online mapping portal to share data with Belizeans to encourage future citizen science efforts. Four diverse communities were targeted ranging from larger more populated towns, to smaller villages across central and southern Belize: San Pedro, Caye Caulker, Punta Gorda, and Monkey River. Fieldwork was conducted over 1 month, during which data points were collected in 50-m surveys followed by debris cleanup and removal. Features in our database included material, quantity, item, brand, and condition. Over 6000 pieces of debris were recorded in GIS for further analysis, and 299 gal of debris were removed from the shores of Belize. The most abundant form of debris observed was plastic (commonly bottles) across all locations; plastic comprised 77.6 % of all debris items observed. Through GIS, a detailed snapshot understanding of debris patterns across multiple settings in Belize was documented. Ongoing collaborations with local organizations in Belize have demonstrated significant interest and utility for such GIS approaches in analyzing and managing marine debris. The data, methodology, visual representations, and online mapping platform resulting from this research are a first step in directly supporting local Belizean community advocacy and policy, while contributing to larger institutional strategies for addressing marine debris issues in the Caribbean. PMID:27614957

  9. Mapping marine debris across coastal communities in Belize: developing a baseline for understanding the distribution of litter on beaches using geographic information systems.

    PubMed

    Bennett-Martin, Paulita; Visaggi, Christy C; Hawthorne, Timothy L

    2015-10-01

    Monitoring of marine debris (also known as marine litter) is an essential step in the process to eradicate ecological dangers in marine ecosystems caused by humans. This study examines marine debris in the Caribbean country of Belize using geographic information systems (GIS) to develop (1) a detailed data library for use on handheld Global Positioning System (GPS) units and tablets with mobile mapping applications for deployment in the field and (2) a freely available, online mapping portal to share data with Belizeans to encourage future citizen science efforts. Four diverse communities were targeted ranging from larger more populated towns, to smaller villages across central and southern Belize: San Pedro, Caye Caulker, Punta Gorda, and Monkey River. Fieldwork was conducted over 1 month, during which data points were collected in 50-m surveys followed by debris cleanup and removal. Features in our database included material, quantity, item, brand, and condition. Over 6000 pieces of debris were recorded in GIS for further analysis, and 299 gal of debris were removed from the shores of Belize. The most abundant form of debris observed was plastic (commonly bottles) across all locations; plastic comprised 77.6 % of all debris items observed. Through GIS, a detailed snapshot understanding of debris patterns across multiple settings in Belize was documented. Ongoing collaborations with local organizations in Belize have demonstrated significant interest and utility for such GIS approaches in analyzing and managing marine debris. The data, methodology, visual representations, and online mapping platform resulting from this research are a first step in directly supporting local Belizean community advocacy and policy, while contributing to larger institutional strategies for addressing marine debris issues in the Caribbean.

  10. Estrogens from sewage in coastal marine environments.

    PubMed Central

    Atkinson, Shannon; Atkinson, Marlin J; Tarrant, Ann M

    2003-01-01

    Estrogens are ancient molecules that act as hormones in vertebrates and are biologically active in diverse animal phyla. Sewage contains natural and synthetic estrogens that are detectable in streams, rivers, and lakes. There are no studies reporting the distribution of steroidal estrogens in marine environments. We measured estrogens in sewage, injection-well water, and coastal tropical and offshore tropical water in the Pacific Ocean, western Atlantic Ocean, and Caribbean Sea. Concentrations of unconjugated estrone ranged from undetectable (< 40 pg/L) in the open ocean to nearly 2,000 pg/L in Key West, Florida, and Rehoboth Bay, Delaware (USA); estrone concentrations were highest near sources of sewage. Enzymatic hydrolysis of steroid conjugates in seawater samples indicated that polar conjugates comprise one-half to two-thirds of "total estrone" (unconjugated plus conjugated) in Hawaiian coastal samples. Adsorption to basalt gravel and carbonate sand was less than 20% per week and indicates that estrogens can easily leach into the marine environment from septic fields and high-estrogen groundwater. Of 20 sites (n = 129 samples), the mean values from 12 sites were above the threshold concentration for uptake into coral, indicating that there is a net uptake of anthropogenic steroidal estrogen into these environments, with unknown impacts. PMID:12676611

  11. Estrogens from sewage in coastal marine environments.

    PubMed

    Atkinson, Shannon; Atkinson, Marlin J; Tarrant, Ann M

    2003-04-01

    Estrogens are ancient molecules that act as hormones in vertebrates and are biologically active in diverse animal phyla. Sewage contains natural and synthetic estrogens that are detectable in streams, rivers, and lakes. There are no studies reporting the distribution of steroidal estrogens in marine environments. We measured estrogens in sewage, injection-well water, and coastal tropical and offshore tropical water in the Pacific Ocean, western Atlantic Ocean, and Caribbean Sea. Concentrations of unconjugated estrone ranged from undetectable (< 40 pg/L) in the open ocean to nearly 2,000 pg/L in Key West, Florida, and Rehoboth Bay, Delaware (USA); estrone concentrations were highest near sources of sewage. Enzymatic hydrolysis of steroid conjugates in seawater samples indicated that polar conjugates comprise one-half to two-thirds of "total estrone" (unconjugated plus conjugated) in Hawaiian coastal samples. Adsorption to basalt gravel and carbonate sand was less than 20% per week and indicates that estrogens can easily leach into the marine environment from septic fields and high-estrogen groundwater. Of 20 sites (n = 129 samples), the mean values from 12 sites were above the threshold concentration for uptake into coral, indicating that there is a net uptake of anthropogenic steroidal estrogen into these environments, with unknown impacts. PMID:12676611

  12. Marine and Coastal Resources. Global Issues Education Packet.

    ERIC Educational Resources Information Center

    Holm, Amy E.

    At least 70% of the Earth is covered with water. This packet provides background information on eight areas of concern regarding marine and coastal resources. Considered are: (1) "Coastal Resources"; (2) "Mangroves"; (3) "Coral Reefs"; (4) "Ocean Resources"; (5) "Aquaculture"; (6) "Pollution"; (7) "Marine Debris"; and (8) "The Global Commons."…

  13. 77 FR 53224 - Coastal and Marine Ecological Classification Standard

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-08-31

    ... Geological Survey Coastal and Marine Ecological Classification Standard AGENCY: Department of the Interior, U.S. Geological Survey. ACTION: Notice of endorsement of coastal and marine ecological classification... Ecological Classification Standard (CMECS) as the first-ever comprehensive federal data standard...

  14. A Multi Size-Level Assessment of Benthic Marine Communities in a Coastal Environment: Are They Different Sides of the Same Coin?

    PubMed Central

    Vannini, Claudia; Volpi, Marta; Lardicci, Claudio

    2015-01-01

    Organism body size has been demonstrated to be a discriminating element in shaping the response of living beings to environmental factors, thus playing a fundamental role in community structuring. Despite the importance of studies elucidating relations among communities of different size levels in ecosystems, the attempts that have been made in this sense are still very scarce and a reliable approach for these research still has to be defined. We characterized the benthic communities of bacteria, microbial eukaryotes, meiofauna and macrofauna in a coastal environment, encompassing a 10000-fold gradient in body size, testing and discussing a mixed approach of molecular fingerprinting for microbes and morphological observations for meio- and macrofauna. We found no correlation among structures of the different size-level communities: this suggests that community composition at one size-level could have no (or very low) influence on the community composition at other size-levels. Moreover, each community responds in a different way to the environmental parameters and with a degree of sensitivity which seems to increase with organism size. Therefore, our data indicate that the characterization of all the different size levels is clearly a necessity in order to study the dynamics really acting in a system. PMID:26075405

  15. A Multi Size-Level Assessment of Benthic Marine Communities in a Coastal Environment: Are They Different Sides of the Same Coin?

    PubMed

    Vannini, Claudia; Volpi, Marta; Lardicci, Claudio

    2015-01-01

    Organism body size has been demonstrated to be a discriminating element in shaping the response of living beings to environmental factors, thus playing a fundamental role in community structuring. Despite the importance of studies elucidating relations among communities of different size levels in ecosystems, the attempts that have been made in this sense are still very scarce and a reliable approach for these research still has to be defined. We characterized the benthic communities of bacteria, microbial eukaryotes, meiofauna and macrofauna in a coastal environment, encompassing a 10000-fold gradient in body size, testing and discussing a mixed approach of molecular fingerprinting for microbes and morphological observations for meio- and macrofauna. We found no correlation among structures of the different size-level communities: this suggests that community composition at one size-level could have no (or very low) influence on the community composition at other size-levels. Moreover, each community responds in a different way to the environmental parameters and with a degree of sensitivity which seems to increase with organism size. Therefore, our data indicate that the characterization of all the different size levels is clearly a necessity in order to study the dynamics really acting in a system.

  16. Marine resources. [coastal processes, ice, oceanography, and living marine resources

    NASA Technical Reports Server (NTRS)

    Tilton, E. L., III

    1974-01-01

    Techniques have been developed for defining coastal circulation patterns using sediment as a natural tracer, allowing the formulation of new circulation concepts in some geographical areas and, in general, a better capability for defining the seasonal characteristics of coastal circulation. An analytical technique for measurement of absolute water depth based upon the ratios of two MSS channels has been developed. Suspended sediment has found wide use as a tracer, but a few investigators have reported limited success in measuring the type and amount of sediment quantitatively from ERTS-1 digital data. Significant progress has been made in developing techniques for using ERTS-1 data to locate, identify, and monitor sea and lake ice. Ice features greater than 70 meters in width can be detected, and both arctic and antarctic icebergs have been identified. In the application area of living marine resources, the use of ERTS-1 image-density patterns as a potential indicator of fish school location has been demonstrated for one coastal commercial resource, menhaden. ERTS-1 data have been used to locate ocean current boundaries using ERTS-1 image-density enhancement, and some techniques are under development for measurement of suspended particle concentration and chlorophyll concentration. The interrelationship of water color and surface characteristics (sea state) are also being studied to improve spectral and spatial interpretive techniques.

  17. Marine slicks due to inhomogeneous coastal currents

    NASA Astrophysics Data System (ADS)

    Ermakov, S.; Kapustin, I.; Lazareva, T.; Makarov, E.; Sergievskaya, I.

    2009-04-01

    Field observations of banded slicks on the sea surface aimed to study the relation between slicks and marine currents were carried out in the coastal zone of the Black Sea. Measurements of current velocity profiles were performed from a motor boat with a 600-kHz acoustic Doppler current meter (ADCP). Additionally, current velocities in the thin upper water layer (about 5 mm thickness) were measured using special surface floats when fixing their trajectories with GPS receivers. Samples of surfactant films inside/outside the slicks were collected using a net method, and the films were characterized when studying in laboratory the action of collected films on characteristics of gravity-capillary waves. The studied slicks were also detected in the Envisat SAR imagery. It is obtained that the banded slicks are characterized by accumulation of surfactants, and are oriented along the coastal currents and approximately along the bottom topography slope. The slick bands in accordance with theory are located in the areas of convergency of weak transverse current components, and can reflect variations of the current velocity profiles and thus the bottom topography features. The work was supported by RFBR (Projects 08-05-00634, 07-05-00125), and INTAS (Projects BOW, MOPED, DEMOSSS).

  18. Development and validation of an experimental life support system for assessing the effects of global climate change and environmental contamination on estuarine and coastal marine benthic communities.

    PubMed

    Coelho, Francisco J R C; Rocha, Rui J M; Pires, Ana C C; Ladeiro, Bruno; Castanheira, José M; Costa, Rodrigo; Almeida, Adelaide; Cunha, Angela; Lillebø, Ana Isabel; Ribeiro, Rui; Pereira, Ruth; Lopes, Isabel; Marques, Catarina; Moreira-Santos, Matilde; Calado, Ricardo; Cleary, Daniel F R; Gomes, Newton C M

    2013-08-01

    An experimental life support system (ELSS) was constructed to study the interactive effects of multiple stressors on coastal and estuarine benthic communities, specifically perturbations driven by global climate change and anthropogenic environmental contamination. The ELSS allows researchers to control salinity, pH, temperature, ultraviolet radiation (UVR), tidal rhythms and exposure to selected contaminants. Unlike most microcosms previously described, our system enables true independent replication (including randomization). In addition to this, it can be assembled using commercially available materials and equipment, thereby facilitating the replication of identical experimental setups in different geographical locations. Here, we validate the reproducibility and environmental quality of the system by comparing chemical and biological parameters recorded in our ELSS with those prevalent in the natural environment. Water, sediment microbial community and ragworm (the polychaete Hediste diversicolor) samples were obtained from four microcosms after 57 days of operation. In general, average concentrations of dissolved inorganic nutrients (NO3 (-) ; NH4 (+) and PO4 (-3) ) in the water column of the ELSS experimental control units were within the range of concentrations recorded in the natural environment. While some shifts in bacterial community composition were observed between in situ and ELSS sediment samples, the relative abundance of most metabolically active bacterial taxa appeared to be stable. In addition, ELSS operation did not significantly affect survival, oxidative stress and neurological biomarkers of the model organism Hediste diversicolor. The validation data indicate that this system can be used to assess independent or interactive effects of climate change and environmental contamination on benthic communities. Researchers will be able to simulate the effects of these stressors on processes driven by microbial communities, sediment and seawater

  19. Bacterial diversity in oil-polluted marine coastal sediments.

    PubMed

    Acosta-González, Alejandro; Marqués, Silvia

    2016-04-01

    Marine environments harbour a persistent microbial seed which can be shaped by changes of the environmental conditions such as contamination by petroleum components. Oil spills, together with small but continuous discharges of oil from transportation and recreational activities, are important sources of hydrocarbon pollution within the marine realm. Consequently, prokaryotic communities have become well pre-adapted toward oil pollution, and many microorganisms that are exposed to its presence develop an active degradative response. The natural attenuation of oil pollutants, as has been demonstrated in many sites, is modulated according to the intrinsic environmental properties such as the availability of terminal electron acceptors and elemental nutrients, together with the degree of pollution and the type of hydrocarbon fractions present. Whilst dynamics in the bacterial communities in the aerobic zones of coastal sediments are well characterized and the key players in hydrocarbon biodegradation have been identified, the subtidal ecology of the anaerobic community is still not well understood. However, current data suggest common patterns of response in these ecosystems. PMID:26773654

  20. Bacterial diversity in oil-polluted marine coastal sediments.

    PubMed

    Acosta-González, Alejandro; Marqués, Silvia

    2016-04-01

    Marine environments harbour a persistent microbial seed which can be shaped by changes of the environmental conditions such as contamination by petroleum components. Oil spills, together with small but continuous discharges of oil from transportation and recreational activities, are important sources of hydrocarbon pollution within the marine realm. Consequently, prokaryotic communities have become well pre-adapted toward oil pollution, and many microorganisms that are exposed to its presence develop an active degradative response. The natural attenuation of oil pollutants, as has been demonstrated in many sites, is modulated according to the intrinsic environmental properties such as the availability of terminal electron acceptors and elemental nutrients, together with the degree of pollution and the type of hydrocarbon fractions present. Whilst dynamics in the bacterial communities in the aerobic zones of coastal sediments are well characterized and the key players in hydrocarbon biodegradation have been identified, the subtidal ecology of the anaerobic community is still not well understood. However, current data suggest common patterns of response in these ecosystems.

  1. Reducing Vulnerability of Coastal Communities to Coastal Hazards through Building Community Resilience

    NASA Astrophysics Data System (ADS)

    Bhj, Premathilake

    2010-05-01

    Reducing Vulnerability of Coastal Communities to Coastal Hazards through Building Community Resilience B H J Premathilake Coast Conservation Department Sri Lanka Email: bhjprem@yahoo.com This paper contains two parts; Part one describes the comprehensive approach adopted by our project to build social, economical, institutional and environmental resilience of the tsunami affected communities in Sri Lanka to cope with future natural disasters. Community development, Coastal resource management and Disaster management are the three pillars of this model and these were built simultaneously to bring the community into a higher level of resilience to coastal hazards. Second part describes the application of Coastal Community Resilience (CCR) Assessment framework to evaluate the progress achieved by the project in building overall resilience of the communities during its period. It further describes how to estimate the contribution of this specific project for the improved resilience status of the selected communities in a multi stakeholder environment.

  2. Coastal and Marine Geology Program video and photograph portal

    USGS Publications Warehouse

    Golden, Nadine E.; Ackerman, Seth D.

    2015-01-01

    Search all Coastal and Marine Geology Program imagery by selecting "Explore Data Layers." Or select Pacific, Atlantic, or Gulf Coast to enter the portal by region. Or start with the tutorial then dive in!

  3. PREFACE: MARINE AND COASTAL APPLICATIONS IN LANDSCAPE ECOLOGY

    EPA Science Inventory

    Landscape ecology traditionally has been limited to the study of terrestrial systems; however, the questions and methods defining the science are equally relevant for marine and coastal systems. The reciprocal relationship between spatial pattern and ecological processes and the...

  4. Seasonal variations of marine protist community structure based on taxon-specific traits using the eastern English Channel as a model coastal system.

    PubMed

    Genitsaris, Savvas; Monchy, Sébastien; Viscogliosi, Eric; Sime-Ngando, Télesphore; Ferreira, Stéphanie; Christaki, Urania

    2015-05-01

    Previous microscopy-based studies in the eastern English Channel have revealed it to be a productive meso-eutrophic coastal ecosystem, characterized by strong repeating patterns in microplankton succession. The present study examines the seasonal structure of the entire protistan community from March 2011 to July 2013, using tag pyrosequencing of the V2-V3 hypervariable region of the 18S rRNA gene. A total of 1242 OTUs and 28 high-level taxonomic groups, which included previously undetected taxa in the area, were identified. The detected OTUs were considered according to taxon-specific traits, which included their trophic role, abundance and specialization level. Taxa differentiation based on specialization level rather than abundance was more informative in describing community organization. While generalists were always abundant, numerous specialists that were either rare or absent in most samples, increased in abundance for short periods, appearing to be overall abundant. Statistical and network analyses showed that the protistan seasonal organization was influenced by environmental parameters. It also highlighted that in addition to grazers, fungi and parasites played potentially significant roles during phytoplankton blooms. Overall, while the protistan succession was mainly shaped by environmental variations, biotic interactions among co-occurring taxa were the main structural drivers of the temporal assemblages.

  5. Understanding and managing human threats to the coastal marine environment.

    PubMed

    Crain, Caitlin M; Halpern, Benjamin S; Beck, Mike W; Kappel, Carrie V

    2009-04-01

    Coastal marine habitats at the interface of land and sea are subject to threats from human activities in both realms. Researchers have attempted to quantify how these various threats impact different coastal ecosystems, and more recently have focused on understanding the cumulative impact from multiple threats. Here, the top threats to coastal marine ecosystems and recent efforts to understand their relative importance, ecosystem-level impacts, cumulative effects, and how they can best be managed and mitigated, are briefly reviewed. Results of threat analysis and rankings will differ depending on the conservation target (e.g., vulnerable species, pristine ecosystems, mitigatable threats), scale of interest (local, regional, or global), whether externalities are considered, and the types of management tools available (e.g., marine-protected areas versus ecosystem-based management). Considering the cumulative effect of multiple threats has only just begun and depends on spatial analysis to predict overlapping threats and a better understanding of multiple-stressor effects and interactions. Emerging conservation practices that hold substantial promise for protecting coastal marine systems include multisector approaches, such as ecosystem-based management (EBM), that account for ecosystem service valuation; comprehensive spatial management, such as ocean zoning; and regulatory mechanisms that encourage or require cross-sector goal setting and evaluation. In all cases, these efforts require a combination of public and private initiatives for success. The state of our ecological understanding, public awareness, and policy initiatives make the time ripe for advancing coastal marine management and improving our stewardship of coastal and marine ecosystems.

  6. Metabarcoding approach for nonindigenous species surveillance in marine coastal waters.

    PubMed

    Zaiko, Anastasija; Samuiloviene, Aurelija; Ardura, Alba; Garcia-Vazquez, Eva

    2015-11-15

    In this study, high-throughput sequencing (HTS) metabarcoding was applied for the surveillance of plankton communities within the southeastern (SE) Baltic Sea coastal zone. These results were compared with those from routine monitoring survey and morphological analyses. Four of five nonindigenous species found in the samples were identified exclusively by metabarcoding. All of them are considered as invasive in the Baltic Sea with reported impact on the ecosystem and biodiversity. This study indicates that, despite some current limitations, HTS metabarcoding can provide information on the presence of exotic species and advantageously complement conventional approaches, only requiring the same monitoring effort as before. Even in the currently immature status of HTS, this combination of HTS metabarcoding and observational records is recommended in the early detection of marine pests and delivery of the environmental status metrics of nonindigenous species. PMID:26422121

  7. Feeding type affects microplastic ingestion in a coastal invertebrate community.

    PubMed

    Setälä, Outi; Norkko, Joanna; Lehtiniemi, Maiju

    2016-01-15

    Marine litter is one of the problems marine ecosystems face at present, coastal habitats and food webs being the most vulnerable as they are closest to the sources of litter. A range of animals (bivalves, free swimming crustaceans and benthic, deposit-feeding animals), of a coastal community of the northern Baltic Sea were exposed to relatively low concentrations of 10 μm microbeads. The experiment was carried out as a small scale mesocosm study to mimic natural habitat. The beads were ingested by all animals in all experimental concentrations (5, 50 and 250 beads mL(-1)). Bivalves (Mytilus trossulus, Macoma balthica) contained significantly higher amounts of beads compared with the other groups. Free-swimming crustaceans ingested more beads compared with the benthic animals that were feeding only on the sediment surface. Ingestion of the beads was concluded to be the result of particle concentration, feeding mode and the encounter rate in a patchy environment.

  8. Spatial distribution of marine airborne bacterial communities

    PubMed Central

    Seifried, Jasmin S; Wichels, Antje; Gerdts, Gunnar

    2015-01-01

    The spatial distribution of bacterial populations in marine bioaerosol samples was investigated during a cruise from the North Sea to the Baltic Sea via Skagerrak and Kattegat. The analysis of the sampled bacterial communities with a pyrosequencing approach revealed that the most abundant phyla were represented by the Proteobacteria (49.3%), Bacteroidetes (22.9%), Actinobacteria (16.3%), and Firmicutes (8.3%). Cyanobacteria were assigned to 1.5% of all bacterial reads. A core of 37 bacterial OTUs made up more than 75% of all bacterial sequences. The most abundant OTU was Sphingomonas sp. which comprised 17% of all bacterial sequences. The most abundant bacterial genera were attributed to distinctly different areas of origin, suggesting highly heterogeneous sources for bioaerosols of marine and coastal environments. Furthermore, the bacterial community was clearly affected by two environmental parameters – temperature as a function of wind direction and the sampling location itself. However, a comparison of the wind directions during the sampling and calculated backward trajectories underlined the need for more detailed information on environmental parameters for bioaerosol investigations. The current findings support the assumption of a bacterial core community in the atmosphere. They may be emitted from strong aerosolizing sources, probably being mixed and dispersed over long distances. PMID:25800495

  9. Climate warming and estuarine and marine coastal ecosystems

    SciTech Connect

    Kennedy, V.S.

    1994-12-31

    Estuaries are physically controlled, resilient coastal ecosystems harboring environmentally tolerant species in diluted seawater. Marine coastal systems are less stressed physically and contain some environmentally less tolerant species. Both systems are biologically productive and economically significant. Because of their complex structure and function, it is difficult to predict accurately the effects of climate change, but some broad generalizations can be made. If climate warming occurs, it will raise sea-level, heat shallow waters, and modify precipitation, wind, and water circulation patterns. Rapid sea-level rise could cause the loss of salt marshes, mangrove swamps, and coral reefs, thus diminishing the ecological roles of these highly productive systems. Warmer waters could eliminate heat-sensitive species from part of their geographical range while allowing heat-tolerant species to expand their range, depending on their ability to disperse. Most thermally influenced losses of species will probably only be local, but changed distributions may lead to changed community function. It is more difficult to predict the effects of modified precipitation, wind, and water circulation patterns, but changes could affect organisms dependent on such patterns for food production (e.g., in upwelling regions) or for retention in estuaries. Aquacultural and fishery-related enterprises would be affected negatively in some regions and positively in others. 73 refs.

  10. Seagrasses and the Coastal Marine Environment

    ERIC Educational Resources Information Center

    Phillips, Ronald C.

    1978-01-01

    Coastal ecosystems are the most highly productive in the world. This article discusses seagrasses, major coastal producers, and provides information on their ecology, productivity, position in food chains, and role in sediment stabilization. Recent attempts to restore seagrasses in areas of massive kills are described. (MA)

  11. Understanding and managing human threats to the coastal marine environment.

    PubMed

    Crain, Caitlin M; Halpern, Benjamin S; Beck, Mike W; Kappel, Carrie V

    2009-04-01

    Coastal marine habitats at the interface of land and sea are subject to threats from human activities in both realms. Researchers have attempted to quantify how these various threats impact different coastal ecosystems, and more recently have focused on understanding the cumulative impact from multiple threats. Here, the top threats to coastal marine ecosystems and recent efforts to understand their relative importance, ecosystem-level impacts, cumulative effects, and how they can best be managed and mitigated, are briefly reviewed. Results of threat analysis and rankings will differ depending on the conservation target (e.g., vulnerable species, pristine ecosystems, mitigatable threats), scale of interest (local, regional, or global), whether externalities are considered, and the types of management tools available (e.g., marine-protected areas versus ecosystem-based management). Considering the cumulative effect of multiple threats has only just begun and depends on spatial analysis to predict overlapping threats and a better understanding of multiple-stressor effects and interactions. Emerging conservation practices that hold substantial promise for protecting coastal marine systems include multisector approaches, such as ecosystem-based management (EBM), that account for ecosystem service valuation; comprehensive spatial management, such as ocean zoning; and regulatory mechanisms that encourage or require cross-sector goal setting and evaluation. In all cases, these efforts require a combination of public and private initiatives for success. The state of our ecological understanding, public awareness, and policy initiatives make the time ripe for advancing coastal marine management and improving our stewardship of coastal and marine ecosystems. PMID:19432644

  12. Marine geology and oceanography of Arabian Sea and coastal Pakistan

    SciTech Connect

    Haq, B.U.; Milliman, J.D.

    1985-01-01

    This volume is a collection of papers presented at the first US-Pakistan workshop in marine science held in Karachi, Pakistan, in November 1982. Of the twenty-four contributions in this book, fourteen cover topics specific to the Arabian Sea-coastal Pakistan region. These include six papers on the geology, tectonics, and petroleum potential of Pakistan, four papers on sedimentary processes in the Indus River delta-fan complex, and four papers on the biological oceanography of the Arabian Sea and coastal Pakistan. The additional ten papers are overviews of shelf sedimentation processes, paleoceanography, the marine nutrient cycle, and physical and chemical oceanography.

  13. Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing.

    PubMed

    Massana, Ramon; Gobet, Angélique; Audic, Stéphane; Bass, David; Bittner, Lucie; Boutte, Christophe; Chambouvet, Aurélie; Christen, Richard; Claverie, Jean-Michel; Decelle, Johan; Dolan, John R; Dunthorn, Micah; Edvardsen, Bente; Forn, Irene; Forster, Dominik; Guillou, Laure; Jaillon, Olivier; Kooistra, Wiebe H C F; Logares, Ramiro; Mahé, Frédéric; Not, Fabrice; Ogata, Hiroyuki; Pawlowski, Jan; Pernice, Massimo C; Probert, Ian; Romac, Sarah; Richards, Thomas; Santini, Sébastien; Shalchian-Tabrizi, Kamran; Siano, Raffaele; Simon, Nathalie; Stoeck, Thorsten; Vaulot, Daniel; Zingone, Adriana; de Vargas, Colomban

    2015-10-01

    Although protists are critical components of marine ecosystems, they are still poorly characterized. Here we analysed the taxonomic diversity of planktonic and benthic protist communities collected in six distant European coastal sites. Environmental deoxyribonucleic acid (DNA) and ribonucleic acid (RNA) from three size fractions (pico-, nano- and micro/mesoplankton), as well as from dissolved DNA and surface sediments were used as templates for tag pyrosequencing of the V4 region of the 18S ribosomal DNA. Beta-diversity analyses split the protist community structure into three main clusters: picoplankton-nanoplankton-dissolved DNA, micro/mesoplankton and sediments. Within each cluster, protist communities from the same site and time clustered together, while communities from the same site but different seasons were unrelated. Both DNA and RNA-based surveys provided similar relative abundances for most class-level taxonomic groups. Yet, particular groups were overrepresented in one of the two templates, such as marine alveolates (MALV)-I and MALV-II that were much more abundant in DNA surveys. Overall, the groups displaying the highest relative contribution were Dinophyceae, Diatomea, Ciliophora and Acantharia. Also, well represented were Mamiellophyceae, Cryptomonadales, marine alveolates and marine stramenopiles in the picoplankton, and Monadofilosa and basal Fungi in sediments. Our extensive and systematic sequencing of geographically separated sites provides the most comprehensive molecular description of coastal marine protist diversity to date.

  14. Marine Occupations in the Texas Coastal Zone.

    ERIC Educational Resources Information Center

    McKinnerney, Beryl; Clark, Donald L.

    Marine career information is provided, intended for use by high school students, counselors, teachers, and curriculum developers. Material was gathered from a review of occupational publications, including extended use of the "Dictionary of Occupational Titles" (D.O.T.), and from interviews of persons employed in marine occupations in Texas.…

  15. The coastal marine Tardigrada of the Americas.

    PubMed

    Miller, William R; Perry, Emma S

    2016-06-20

    The Western Hemisphere or the New World, also known as the Americas (North, Central and South America, associated islands and included seas) have historically been divided into two Realms, the Nearctic and Neotropical based on terrestrial biogeography. The coasts of these two terrestrial realms are bordered by six marine realms, 14 marine provinces and 67 marine ecoregions. From current literature, a comprehensive list of the marine tardigrade fauna from the Americas is presented. Data on marine tardigrades were obtained from 385 published Records of the Occurrence (RoO) of a species, their location, tidal zone, and the substrates from which they were reported. Authors' identifications were accepted at face value unless subsequently amended. Thirty genera and 82 species or subspecies are reported from the Americas; 49 species are documented from margins of the terrestrial Nearctic realm (North America) and 48 from terrestrial Neotropical realm (South America) with only 17 species occurring in both. We define cosmopolitan distribution for marine tardigrades as occurring in or on the margins of five of the seven oceans, only two species of marine tardigrade meets this standard. From the Americas 39 species have been described as new to science, 32 species appear restricted to the hemisphere. Taxa were assigned to marine ecoregions based on adjacent geopolitical units (country, states, provinces, etc.) described in published records. Although tardigrades have been reported from all six marine realms, they are only known from 21 of the 67 ecoregions. Most marine tardigrade sampling in the Americas has focused on near shore substrate (sand, mud, barnacles); for some species no substrates have been reported. The west coasts of both continents have little or no data about tardigrade presence.

  16. The coastal marine Tardigrada of the Americas.

    PubMed

    Miller, William R; Perry, Emma S

    2016-01-01

    The Western Hemisphere or the New World, also known as the Americas (North, Central and South America, associated islands and included seas) have historically been divided into two Realms, the Nearctic and Neotropical based on terrestrial biogeography. The coasts of these two terrestrial realms are bordered by six marine realms, 14 marine provinces and 67 marine ecoregions. From current literature, a comprehensive list of the marine tardigrade fauna from the Americas is presented. Data on marine tardigrades were obtained from 385 published Records of the Occurrence (RoO) of a species, their location, tidal zone, and the substrates from which they were reported. Authors' identifications were accepted at face value unless subsequently amended. Thirty genera and 82 species or subspecies are reported from the Americas; 49 species are documented from margins of the terrestrial Nearctic realm (North America) and 48 from terrestrial Neotropical realm (South America) with only 17 species occurring in both. We define cosmopolitan distribution for marine tardigrades as occurring in or on the margins of five of the seven oceans, only two species of marine tardigrade meets this standard. From the Americas 39 species have been described as new to science, 32 species appear restricted to the hemisphere. Taxa were assigned to marine ecoregions based on adjacent geopolitical units (country, states, provinces, etc.) described in published records. Although tardigrades have been reported from all six marine realms, they are only known from 21 of the 67 ecoregions. Most marine tardigrade sampling in the Americas has focused on near shore substrate (sand, mud, barnacles); for some species no substrates have been reported. The west coasts of both continents have little or no data about tardigrade presence. PMID:27395594

  17. Defining seasonal marine microbial community dynamics.

    PubMed

    Gilbert, Jack A; Steele, Joshua A; Caporaso, J Gregory; Steinbrück, Lars; Reeder, Jens; Temperton, Ben; Huse, Susan; McHardy, Alice C; Knight, Rob; Joint, Ian; Somerfield, Paul; Fuhrman, Jed A; Field, Dawn

    2012-02-01

    Here we describe, the longest microbial time-series analyzed to date using high-resolution 16S rRNA tag pyrosequencing of samples taken monthly over 6 years at a temperate marine coastal site off Plymouth, UK. Data treatment effected the estimation of community richness over a 6-year period, whereby 8794 operational taxonomic units (OTUs) were identified using single-linkage preclustering and 21 130 OTUs were identified by denoising the data. The Alphaproteobacteria were the most abundant Class, and the most frequently recorded OTUs were members of the Rickettsiales (SAR 11) and Rhodobacteriales. This near-surface ocean bacterial community showed strong repeatable seasonal patterns, which were defined by winter peaks in diversity across all years. Environmental variables explained far more variation in seasonally predictable bacteria than did data on protists or metazoan biomass. Change in day length alone explains >65% of the variance in community diversity. The results suggested that seasonal changes in environmental variables are more important than trophic interactions. Interestingly, microbial association network analysis showed that correlations in abundance were stronger within bacterial taxa rather than between bacteria and eukaryotes, or between bacteria and environmental variables.

  18. Ecological impacts of ocean acidification in coastal marine environments (Invited)

    NASA Astrophysics Data System (ADS)

    Harley, C.; Crim, R.; Gooding, R.; Nienhuis, S.; Tang, E.

    2010-12-01

    Rising atmospheric carbon dioxide concentrations are driving rapid and potentially unprecedented reductions in pH and carbonate ion availability in coastal marine environments. This process, known as ocean acidification (OA), has far-reaching implications for the performance and survival of marine organisms, particularly those with calcified shells and skeletons. Here, we highlight the ways in which OA impacts plants and animals in a coastal benthic food web, with an emphasis on what we know and what we don’t know about the ways in which the responses of individual organisms will scale up to long-term changes in community structure. Our system of interest is the rocky shore benthic community that is broadly represented from Alaska through California. Ecologically important species include producers (micro- and macro-algae), grazers (urchins and gastropods), filter feeders (mussels), and predators (sea stars). Although the direct effects of OA on coastal phytoplankton and kelps remain poorly understood, it appears as though elevated CO2 will increase the doubling rate of benthic diatoms. Small changes in food supply, however, may pale in comparison to the direct effects of OA on heavily calcified grazers and filter feeders. Sea urchin and mussel growth are both reduced by increased CO2 in the lab, and decadal-scale reductions in pH are associated with reduced turban snail growth in the field. Although adult abalone growth appears to be unaffected by CO2, larval development is impaired and larval survival is significantly reduced in acidified conditions. In contrast to the negative effects of OA on heavily calcified herbivores and filter feeders, lightly calcified sea stars actually grow faster when CO2 is experimentally increased. The acidification-induced changes described here are likely to result in substantial shifts in the benthic ecosystem. Increasing predation pressure may further reduce the abundance of grazers and filter feeders that are already suffering

  19. THE MAJOR COASTAL COMMUNITIES OF NORTH CAROLINA.

    ERIC Educational Resources Information Center

    Marine Science Project, Beaufort, NC.

    IDENTIFIED IN THIS MARINE SCIENCE HANDBOOK ARE 5 MAJOR TYPES OF NATURAL HABITATS--(1) OPEN BEACH AND ANY OTHER SEAWARD-FACING, UNPROTECTED STRAND, (2) GROINS, JETTIES, PILINGS, AND ROCK BULKHEADS, (3) SAND AND/OR MUD FLAT, (4) SALT MARSH, AND (5) UPLAND COMMUNITIES. EACH HABITAT IS DESCRIBED IN TERMS OF TYPICAL PLANTS AND ANIMALS, ADAPTATIONS, AND…

  20. Marine litter in Mediterranean sandy littorals: Spatial distribution patterns along central Italy coastal dunes.

    PubMed

    Poeta, Gianluca; Battisti, Corrado; Acosta, Alicia T R

    2014-12-15

    Sandy shores are generally considered important sinks for marine litter and the presence of this litter may represent a serious threat to biotic communities and dune integrity mostly due to cleaning activities carried out through mechanical equipment. In spring (April-May) 2012 we sampled 153 2×2m random plots to assess the spatial distribution patterns of litter on Central Italy sandy shores. We analysed the relationship between the presence of litter and coastal dune habitats along the sea-inland gradient. Our results showed that the most frequent litter items were plastic and polystyrene. Differences of marine litter spatial distribution were found between upper beach and fore dune habitats and fixed dune habitats: embryo dune and mobile dune habitats show the highest frequency of litter, but, surprisingly, marine litter did not impact fixed dune habitats, these possibly acting as a natural barrier protecting the inner part of the coast from marine litter dispersion. PMID:25455823

  1. Marine litter in Mediterranean sandy littorals: Spatial distribution patterns along central Italy coastal dunes.

    PubMed

    Poeta, Gianluca; Battisti, Corrado; Acosta, Alicia T R

    2014-12-15

    Sandy shores are generally considered important sinks for marine litter and the presence of this litter may represent a serious threat to biotic communities and dune integrity mostly due to cleaning activities carried out through mechanical equipment. In spring (April-May) 2012 we sampled 153 2×2m random plots to assess the spatial distribution patterns of litter on Central Italy sandy shores. We analysed the relationship between the presence of litter and coastal dune habitats along the sea-inland gradient. Our results showed that the most frequent litter items were plastic and polystyrene. Differences of marine litter spatial distribution were found between upper beach and fore dune habitats and fixed dune habitats: embryo dune and mobile dune habitats show the highest frequency of litter, but, surprisingly, marine litter did not impact fixed dune habitats, these possibly acting as a natural barrier protecting the inner part of the coast from marine litter dispersion.

  2. The Marine Realms Information Bank, a coastal and marine digital library at USGS

    USGS Publications Warehouse

    Marincioni, Fausto; Lightsom, Frances L.; Riall, Rebecca L.; Linck, Guthrie A.; Aldrich, Thomas C.

    2003-01-01

    The Marine Realms Information Bank (MRIB) is a distributed geolibrary of the USGS Coastal and Marine Geology Program that (1) prioritizes search and display of information by place (location on the Earth's surface), and (2) links information existing in distributed and independent sources. The MRIB aims to provide easy access to knowledge pertaining to the ocean and the associated atmospheric and terrestrial environments to scientists, decision-makers, and the interested members of the public.

  3. Marine kelp: energy resource in the coastal zone

    SciTech Connect

    Ritschard, R.L.; Haven, K.F.

    1980-11-01

    An ocean farm system is described. The analysis of the ocean farm system includes a description of the types of impacts that might occur if large scale operations become available, such as the production of environmental residuals, conflicts with the fishing and shipping industries, and other legal/institutional impacts. A discussion is given of the relationship of the marine biomass concept and coastal zone management plans.

  4. Levoglucosan and phenols in Antarctic marine, coastal and plateau aerosols.

    PubMed

    Zangrando, Roberta; Barbaro, Elena; Vecchiato, Marco; Kehrwald, Natalie M; Barbante, Carlo; Gambaro, Andrea

    2016-02-15

    Due to its isolated location, Antarctica is a natural laboratory for studying atmospheric aerosols and pollution in remote areas. Here, we determined levoglucosan and phenolic compounds (PCs) at diverse Antarctic sites: on the plateau, a coastal station and during an oceanographic cruise. Levoglucosan and PCs reached the Antarctic plateau where they were observed in accumulation mode aerosols (with median levoglucosan concentrations of 6.4 pg m(-3) and 4.1 pg m(-3), and median PC concentrations of 15.0 pg m(-3) and 7.3 pg m(-3)). Aged aerosols arrived at the coastal site through katabatic circulation with the majority of the levoglucosan mass distributed on larger particulates (24.8 pg m(-3)), while PCs were present in fine particles (34.0 pg m(-3)). The low levoglucosan/PC ratios in Antarctic aerosols suggest that biomass burning aerosols only had regional, rather than local, sources. General acid/aldehyde ratios were lower at the coastal site than on the plateau. Levoglucosan and PCs determined during the oceanographic cruise were 37.6 pg m(-3) and 58.5 pg m(-3) respectively. Unlike levoglucosan, which can only be produced by biomass burning, PCs have both biomass burning and other sources. Our comparisons of these two types of compounds across a range of Antarctic marine, coastal, and plateau sites demonstrate that local marine sources dominate Antarctic PC concentrations. PMID:26674690

  5. Levoglucosan and phenols in Antarctic marine, coastal and plateau aerosols.

    PubMed

    Zangrando, Roberta; Barbaro, Elena; Vecchiato, Marco; Kehrwald, Natalie M; Barbante, Carlo; Gambaro, Andrea

    2016-02-15

    Due to its isolated location, Antarctica is a natural laboratory for studying atmospheric aerosols and pollution in remote areas. Here, we determined levoglucosan and phenolic compounds (PCs) at diverse Antarctic sites: on the plateau, a coastal station and during an oceanographic cruise. Levoglucosan and PCs reached the Antarctic plateau where they were observed in accumulation mode aerosols (with median levoglucosan concentrations of 6.4 pg m(-3) and 4.1 pg m(-3), and median PC concentrations of 15.0 pg m(-3) and 7.3 pg m(-3)). Aged aerosols arrived at the coastal site through katabatic circulation with the majority of the levoglucosan mass distributed on larger particulates (24.8 pg m(-3)), while PCs were present in fine particles (34.0 pg m(-3)). The low levoglucosan/PC ratios in Antarctic aerosols suggest that biomass burning aerosols only had regional, rather than local, sources. General acid/aldehyde ratios were lower at the coastal site than on the plateau. Levoglucosan and PCs determined during the oceanographic cruise were 37.6 pg m(-3) and 58.5 pg m(-3) respectively. Unlike levoglucosan, which can only be produced by biomass burning, PCs have both biomass burning and other sources. Our comparisons of these two types of compounds across a range of Antarctic marine, coastal, and plateau sites demonstrate that local marine sources dominate Antarctic PC concentrations.

  6. Coastal marine eutrophication assessment: a review on data analysis.

    PubMed

    Kitsiou, Dimitra; Karydis, Michael

    2011-05-01

    A wide variety of data analysis techniques have been applied for quantitative assessment of coastal marine eutrophication. Indicators for assessing eutrophication and frequency distributions have been used to develop scales for characterizing oligotrophy and eutrophication. Numerical classification has also contributed to the assessment of eutrophic trends by grouping sampling sites of similar trophic conditions. Applications of eutrophication assessment based on Principal Component Analysis and Multidimensional Scaling have also been carried out. In addition, the rapid development of Geographical Information Systems has provided the framework for applications of spatial methods and mapping techniques on eutrophication studies. Satellite data have also contributed to eutrophication assessment especially at large scale. Multiple criteria analysis methods can integrate eutrophication variables together with socio-economic parameters providing a holistic approach particularly useful to policy makers. As the current concept of eutrophication problems is to be examined as part of a coastal management approach, more complex quantitative procedures are needed to provide a platform useful for implementation of environmental policy. The present work reviews methods of data analysis used for the assessment of coastal marine eutrophication. The difficulties in applying these methods on data collected from the marine environment are discussed as well as the future perspectives of spatial and multiple criteria choice methods.

  7. Marine aerosol as a possible source for endotoxins in coastal areas.

    PubMed

    Lang-Yona, Naama; Lehahn, Yoav; Herut, Barak; Burshtein, Noa; Rudich, Yinon

    2014-11-15

    Marine aerosols, that are very common in the highly populated coastal cities and communities, may contain biological constituents. Some of this biological fraction of marine aerosols, such as cyanobacteria and plankton debris, may influence human health by inflammation and allergic reactions when inhaled. In this study we identify and compare sources for endotoxins sampled on filters in an on-shore and more-inland site. Filter analysis included endotoxin content, total bacteria, gram-negative bacteria and cyanobacteria genome concentrations as well as ion content in order to identify possible sources for the endotoxins. Satellite images of chlorophyll-a levels and back trajectory analysis were used to further study the cyanobacteria blooms in the sea, close to the trajectory of the sampled air. The highest endotoxin concentrations found in the shoreline site were during winter (3.23±0.17 EU/m(3)), together with the highest cyanobacteria genome (1065.5 genome/m(3)). The elevated endotoxin concentrations were significantly correlated with cyanobacterial levels scaled to the presence of marine aerosol (r=0.90), as well as to chlorophyll-a (r=0.96). Filters sampled further inland showed lower and non-significant correlation between endotoxin and cyanobacteria (r=0.70, P value=0.19), suggesting decrease in marine-originated endotoxin, with possible contributions from other sources of gram-negative non-cyanobacteria. We conclude that marine cyanobacteria may be a dominant contributor to elevated endotoxin levels in coastal areas.

  8. Intermittent Noise Induces Physiological Stress in a Coastal Marine Fish.

    PubMed

    Nichols, Tye A; Anderson, Todd W; Širović, Ana

    2015-01-01

    Anthropogenic noise in the ocean has increased substantially in recent decades, and motorized vessels produce what is likely the most common form of underwater noise pollution. Noise has the potential to induce physiological stress in marine fishes, which may have negative ecological consequences. In this study, physiological effects of increased noise (playback of boat noise recorded in the field) on a coastal marine fish (the giant kelpfish, Heterostichus rostratus) were investigated by measuring the stress responses (cortisol concentration) of fish to increased noise of various temporal dynamics and noise levels. Giant kelpfish exhibited acute stress responses when exposed to intermittent noise, but not to continuous noise or control conditions (playback of recorded natural ambient sound). These results suggest that variability in the acoustic environment may be more important than the period of noise exposure for inducing stress in a marine fish, and provide information regarding noise levels at which physiological responses occur. PMID:26402068

  9. Intermittent Noise Induces Physiological Stress in a Coastal Marine Fish

    PubMed Central

    Nichols, Tye A.; Anderson, Todd W.; Širović, Ana

    2015-01-01

    Anthropogenic noise in the ocean has increased substantially in recent decades, and motorized vessels produce what is likely the most common form of underwater noise pollution. Noise has the potential to induce physiological stress in marine fishes, which may have negative ecological consequences. In this study, physiological effects of increased noise (playback of boat noise recorded in the field) on a coastal marine fish (the giant kelpfish, Heterostichus rostratus) were investigated by measuring the stress responses (cortisol concentration) of fish to increased noise of various temporal dynamics and noise levels. Giant kelpfish exhibited acute stress responses when exposed to intermittent noise, but not to continuous noise or control conditions (playback of recorded natural ambient sound). These results suggest that variability in the acoustic environment may be more important than the period of noise exposure for inducing stress in a marine fish, and provide information regarding noise levels at which physiological responses occur. PMID:26402068

  10. An assessment of seabird influence on Arctic coastal benthic communities

    NASA Astrophysics Data System (ADS)

    Zmudczyńska-Skarbek, Katarzyna; Balazy, Piotr; Kuklinski, Piotr

    2015-04-01

    It is well recognized that seabirds, particularly those nesting in coastal colonies, can provide significant nutrient enrichment to Arctic terrestrial ecosystems. However, little is known about the fate of bird-derived nutrients that return to the marine environment and potentially concentrate below the colonies. To attempt to assess the influence of this potential nutrient enrichment of the coastal benthic community, samples of macroalgae, sea urchins (mainly algivores), and hermit crabs (scavengers) were collected at two Arctic localities (Spitsbergen), (1) below a mixed colony of guillemots and kittiwakes, and (2) in an adjacent geomorphologically similar location not influenced by the seabird colony. A much higher nitrogen stable isotope ratio (δ15N) and total nitrogen content were found in terrestrial plants sampled below the colony than away from it. In benthic macroalgae, however, there were no δ15N differences. This might result from the timing of an intensive growth period in macroalgae in late winter/early spring, when there is little or no runoff from the land, and/or ornithogenic nutrients being directly incorporated by phytoplankton. Sea urchins showed higher δ15N and total N in the control site comparing to the colony-influenced area, suggesting differential food sources in their diet and a role of scavenging/carnivory on higher trophic levels there. Opportunistically feeding hermit crabs showed δ15N and total N enrichment below the seabird colony, suggesting dependence on detritus derived from food chains originating from pelagic producers. Our results indicate that seabirds in the Arctic may fertilize coastal benthic communities through pelagic-benthic coupling, while having no direct impact on bottom primary production.

  11. Developing Partnerships with the Community for Coastal ESD

    ERIC Educational Resources Information Center

    Kawabe, Midori; Kohno, Hiroshi; Ikeda, Reiko; Ishimaru, Takashi; Baba, Osamu; Horimoto, Naho; Kanda, Jota; Matsuyam, Masaji; Moteki, Masato; Oshima, Yayoi; Sasaki, Tsuyoshi; Yap, Minlee

    2013-01-01

    Purpose: The purpose of this paper is to draw lessons for developing community-university partnerships from experiences in promoting coastal education for sustainable development (ESD). Design/methodology/approach: Qualitative data collected from two coastal community outreach projects were analyzed. Findings: The outreach projects improved the…

  12. Oceanic rafting by a coastal community

    PubMed Central

    Fraser, Ceridwen I.; Nikula, Raisa; Waters, Jonathan M.

    2011-01-01

    Oceanic rafting is thought to play a fundamental role in assembling the biological communities of isolated coastal ecosystems. Direct observations of this key ecological and evolutionary process are, however, critically lacking. The importance of macroalgal rafting as a dispersal mechanism has remained uncertain, largely owing to lack of knowledge about the capacity of fauna to survive long voyages at sea and successfully make landfall and establish. Here, we directly document the rafting of a diverse assemblage of intertidal organisms across several hundred kilometres of open ocean, from the subantarctic to mainland New Zealand. Multispecies analyses using phylogeographic and ecological data indicate that 10 epifaunal invertebrate species rafted on six large bull kelp specimens for several weeks from the subantarctic Auckland and/or Snares Islands to the Otago coast of New Zealand, a minimum distance of some 400–600 km. These genetic data are the first to demonstrate that passive rafting can enable simultaneous trans-oceanic transport and landfall of numerous coastal taxa. PMID:20843850

  13. Aurelia aurita Ephyrae Reshape a Coastal Microbial Community.

    PubMed

    Zoccarato, Luca; Celussi, Mauro; Pallavicini, Alberto; Fonda Umani, Serena

    2016-01-01

    Over the last two decades, increasing attention has been paid to the impact of jellyfish blooms on marine communities. Aurelia aurita is one of the most studied of the Scyphozoans, and several studies have been carried out to describe its role as a top-down controller within the classical food web. However, little data are available to define the effects of these jellyfish on microbial communities. The aims of this study were to describe the predation impact of A. aurita ephyrae on a natural microplanktonic assemblage, and to determine any reshaping effects on the prokaryote community composition and functioning. Surface coastal water was used to set up a 24-h grazing experiment in microcosms. Samples were collected to determine the variations in prey biomass, heterotrophic carbon production (HCP), extracellular leucine aminopeptidase activity, and grazing pressure. A next-generation sequencing technique was used to investigate biodiversity shifts within the prokaryote and protist communities through the small subunit rRNA tag approach. This study shows that A. aurita ephyrae were responsible for large decreases in the abundances of the more motile microplankton groups, such as tintinnids, Dinophyceae, and aloricate ciliates. Bacillariophyceae and Mediophyceae showed smaller reductions. No evidence of selective predation emerged in the analysis of the community diversity down to the family level. The heterotrophic prokaryote biomass increased significantly (by up to 45%), in parallel with increases in HCP and leucine aminopeptidase activity (40%). Significant modifications were detected in prokaryotic community composition. Some classes of Gammaproteobacteria and Flavobacteriia showed higher relative abundances when exposed to A. aurita ephyrae, while there was a net decrease for Alphaproteobacteria. Overall, this study provides new insight into the effects of A. aurita on microbial communities, underlining their selective predation toward the more motile groups of

  14. Aurelia aurita Ephyrae Reshape a Coastal Microbial Community.

    PubMed

    Zoccarato, Luca; Celussi, Mauro; Pallavicini, Alberto; Fonda Umani, Serena

    2016-01-01

    Over the last two decades, increasing attention has been paid to the impact of jellyfish blooms on marine communities. Aurelia aurita is one of the most studied of the Scyphozoans, and several studies have been carried out to describe its role as a top-down controller within the classical food web. However, little data are available to define the effects of these jellyfish on microbial communities. The aims of this study were to describe the predation impact of A. aurita ephyrae on a natural microplanktonic assemblage, and to determine any reshaping effects on the prokaryote community composition and functioning. Surface coastal water was used to set up a 24-h grazing experiment in microcosms. Samples were collected to determine the variations in prey biomass, heterotrophic carbon production (HCP), extracellular leucine aminopeptidase activity, and grazing pressure. A next-generation sequencing technique was used to investigate biodiversity shifts within the prokaryote and protist communities through the small subunit rRNA tag approach. This study shows that A. aurita ephyrae were responsible for large decreases in the abundances of the more motile microplankton groups, such as tintinnids, Dinophyceae, and aloricate ciliates. Bacillariophyceae and Mediophyceae showed smaller reductions. No evidence of selective predation emerged in the analysis of the community diversity down to the family level. The heterotrophic prokaryote biomass increased significantly (by up to 45%), in parallel with increases in HCP and leucine aminopeptidase activity (40%). Significant modifications were detected in prokaryotic community composition. Some classes of Gammaproteobacteria and Flavobacteriia showed higher relative abundances when exposed to A. aurita ephyrae, while there was a net decrease for Alphaproteobacteria. Overall, this study provides new insight into the effects of A. aurita on microbial communities, underlining their selective predation toward the more motile groups of

  15. Aurelia aurita Ephyrae Reshape a Coastal Microbial Community

    PubMed Central

    Zoccarato, Luca; Celussi, Mauro; Pallavicini, Alberto; Fonda Umani, Serena

    2016-01-01

    Over the last two decades, increasing attention has been paid to the impact of jellyfish blooms on marine communities. Aurelia aurita is one of the most studied of the Scyphozoans, and several studies have been carried out to describe its role as a top-down controller within the classical food web. However, little data are available to define the effects of these jellyfish on microbial communities. The aims of this study were to describe the predation impact of A. aurita ephyrae on a natural microplanktonic assemblage, and to determine any reshaping effects on the prokaryote community composition and functioning. Surface coastal water was used to set up a 24-h grazing experiment in microcosms. Samples were collected to determine the variations in prey biomass, heterotrophic carbon production (HCP), extracellular leucine aminopeptidase activity, and grazing pressure. A next-generation sequencing technique was used to investigate biodiversity shifts within the prokaryote and protist communities through the small subunit rRNA tag approach. This study shows that A. aurita ephyrae were responsible for large decreases in the abundances of the more motile microplankton groups, such as tintinnids, Dinophyceae, and aloricate ciliates. Bacillariophyceae and Mediophyceae showed smaller reductions. No evidence of selective predation emerged in the analysis of the community diversity down to the family level. The heterotrophic prokaryote biomass increased significantly (by up to 45%), in parallel with increases in HCP and leucine aminopeptidase activity (40%). Significant modifications were detected in prokaryotic community composition. Some classes of Gammaproteobacteria and Flavobacteriia showed higher relative abundances when exposed to A. aurita ephyrae, while there was a net decrease for Alphaproteobacteria. Overall, this study provides new insight into the effects of A. aurita on microbial communities, underlining their selective predation toward the more motile groups of

  16. Assessing Flood Impacts in Rural Coastal Communities Using LIDAR

    NASA Astrophysics Data System (ADS)

    Johnson, E. S.

    2016-06-01

    Coastal communities are vulnerable to floods from storm events which are further exacerbated by storm surges. Additionally, coastal towns provide specific challenges during flood events as many coastal communities are peninsular and vulnerable to inundation of road access points. Publicly available lidar data has been used to model areas of inundation and resulting flood impacts on road networks. However, these models may overestimate areas that are inaccessible as they rely on publicly available Digital Terrain Models. Through incorporation of Digital Surface Models to estimate bridge height, a more accurate model of flood impacts on rural coastal residents can be estimated.

  17. nirS-Encoding denitrifier community composition, distribution, and abundance along the coastal wetlands of China.

    PubMed

    Gao, Juan; Hou, Lijun; Zheng, Yanling; Liu, Min; Yin, Guoyu; Li, Xiaofei; Lin, Xianbiao; Yu, Chendi; Wang, Rong; Jiang, Xiaofen; Sun, Xiuru

    2016-10-01

    For the past few decades, human activities have intensively increased the reactive nitrogen enrichment in China's coastal wetlands. Although denitrification is a critical pathway of nitrogen removal, the understanding of denitrifier community dynamics driving denitrification remains limited in the coastal wetlands. In this study, the diversity, abundance, and community composition of nirS-encoding denitrifiers were analyzed to reveal their variations in China's coastal wetlands. Diverse nirS sequences were obtained and more than 98 % of them shared considerable phylogenetic similarity with sequences obtained from aquatic systems (marine/estuarine/coastal sediments and hypoxia sea water). Clone library analysis revealed that the distribution and composition of nirS-harboring denitrifiers had a significant latitudinal differentiation, but without a seasonal shift. Canonical correspondence analysis showed that the community structure of nirS-encoding denitrifiers was significantly related to temperature and ammonium concentration. The nirS gene abundance ranged from 4.3 × 10(5) to 3.7 × 10(7) copies g(-1) dry sediment, with a significant spatial heterogeneity. Among all detected environmental factors, temperature was a key factor affecting not only the nirS gene abundance but also the community structure of nirS-type denitrifiers. Overall, this study significantly enhances our understanding of the structure and dynamics of denitrifying communities in the coastal wetlands of China. PMID:27311565

  18. Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities.

    PubMed

    Cook, M A; Osborn, A M; Bettandorff, J; Sobecky, P A

    2001-08-01

    Six functional replication origins (repGA14, repGA33, repGA70, repSD41, repSD164 and repSD172), obtained from endogenously isolated, broad-host-range (BHR) marine plasmids ranging in size from 5 to 60 kb, were used to determine plasmid occurrence in three coastal marine sediment sites (in California, Georgia and South Carolina, USA). The plasmid-specific replicons were isolated from plasmid-bearing marine sediment bacteria belonging to the alpha and gamma subclasses of the Proteobacteria. The plasmid sources of the endogenous replicons were considered to be cryptic due to a lack of identifiable phenotypic traits. The putative Rep proteins from a number of these replicons showed similarity to replicons of two recognized families: RCR group III (repSD164) and the FIA family of theta group A (repSD41, repSD121, repGA33 and repGA14). Plasmids isolated from marine bacteria belonging to the genera Pseudoalteromonas, Shewanella and Vibrio cultivated from geographically different coastal sites exhibited homology to two of the marine plasmid replicons, repSD41 and repGA70, obtained from a Vibrio sp. The repGA33 plasmid origin, obtained from a Shewanella sp. isolated from coastal Georgia, was detected in 7% of the Georgia marine sediment Shewanella sp. isolates. Microbial community DNA extracted from marine sediments was also screened for the presence of the plasmid replication sequences. Community DNA samples amplified by PCR yielded a positive signal for the repSD172 and repGA14 replication sequences. The replication origin of BHR plasmid RK2 (IncP) was also detected in marine Vibrio sp. and microbial community DNA extracted from the three coastal sites. These findings provide molecular evidence that marine sediment bacteria harbour an untapped population of BHR plasmids.

  19. Remote sensing in the coastal and marine environment. Proceedings of the US North Atlantic Regional Workshop

    NASA Technical Reports Server (NTRS)

    Zaitzeff, J. B. (Editor); Cornillon, P. (Editor); Aubrey, D. A. (Editor)

    1980-01-01

    Presentations were grouped in the following categories: (1) a technical orientation of Earth resources remote sensing including data sources and processing; (2) a review of the present status of remote sensing technology applicable to the coastal and marine environment; (3) a description of data and information needs of selected coastal and marine activities; and (4) an outline of plans for marine monitoring systems for the east coast and a concept for an east coast remote sensing facility. Also discussed were user needs and remote sensing potentials in the areas of coastal processes and management, commercial and recreational fisheries, and marine physical processes.

  20. Ecotoxicological characterization of marine sediment in Kostrena coastal area.

    PubMed

    Linsak, Zeljko; Linsak, Dijana Tomić; Glad, Marin; Cenov, Arijana; Coklo, Mirna; Coklo, Miran; Manestar, Dubravko; Mićović, Vladimir

    2012-12-01

    Samples of marine sediment were taken on 4 selected sites close to the shipyard industry in Kostrena coastal area. Concentration of polycyclic aromatic hydrocarbons (PAHs), polychlorinated biphenyls (PCBs) and heavy metals (Cu, Pb, Zn, Hg, Fe) were analyzed from chemical-analytical and toxicological aspect. For toxicity detection, the bacterial bioluminescence test (Vibrio fisheri) was used. Concentration of total PAHs varied in the range from 697 to 7807 microg/kg dry weight in marine sediments. The concentration of PCBs in sediment was 1.1 mg/kg dry weight. The highest concentrations of heavy metals were found at the station within the shipyard. PAH toxicity was not correlated with the toxic potential of sediments. The obtained results indicate a high degree of environmental risk, especially at stations within the shipyard, with the 54% possibility of toxic effects. Chemical determination of the concentration of conventional pollutants is not sufficient for assessing the quality of the marine environment and it is necessary to use other approaches in order to evaluate the biological impact.

  1. Chytrids dominate arctic marine fungal communities.

    PubMed

    Hassett, B T; Gradinger, R

    2016-06-01

    Climate change is altering Arctic ecosystem structure by changing weather patterns and reducing sea ice coverage. These changes are increasing light penetration into the Arctic Ocean that are forecasted to increase primary production; however, increased light can also induce photoinhibition and cause physiological stress in algae and phytoplankton that can favour disease development. Fungi are voracious parasites in many ecosystems that can modulate the flow of carbon through food webs, yet are poorly characterized in the marine environment. We provide the first data from any marine ecosystem in which fungi in the Chytridiomycota dominate fungal communities and are linked in their occurrence to light intensities and algal stress. Increased light penetration stresses ice algae and elevates disease incidence under reduced snow cover. Our results show that chytrids dominate Arctic marine fungal communities and have the potential to rapidly change primary production patterns with increased light penetration.

  2. Chytrids dominate arctic marine fungal communities.

    PubMed

    Hassett, B T; Gradinger, R

    2016-06-01

    Climate change is altering Arctic ecosystem structure by changing weather patterns and reducing sea ice coverage. These changes are increasing light penetration into the Arctic Ocean that are forecasted to increase primary production; however, increased light can also induce photoinhibition and cause physiological stress in algae and phytoplankton that can favour disease development. Fungi are voracious parasites in many ecosystems that can modulate the flow of carbon through food webs, yet are poorly characterized in the marine environment. We provide the first data from any marine ecosystem in which fungi in the Chytridiomycota dominate fungal communities and are linked in their occurrence to light intensities and algal stress. Increased light penetration stresses ice algae and elevates disease incidence under reduced snow cover. Our results show that chytrids dominate Arctic marine fungal communities and have the potential to rapidly change primary production patterns with increased light penetration. PMID:26754171

  3. Natural shorelines promote the stability of fish communities in an urbanized coastal system.

    PubMed

    Scyphers, Steven B; Gouhier, Tarik C; Grabowski, Jonathan H; Beck, Michael W; Mareska, John; Powers, Sean P

    2015-01-01

    Habitat loss and fragmentation are leading causes of species extinctions in terrestrial, aquatic and marine systems. Along coastlines, natural habitats support high biodiversity and valuable ecosystem services but are often replaced with engineered structures for coastal protection or erosion control. We coupled high-resolution shoreline condition data with an eleven-year time series of fish community structure to examine how coastal protection structures impact community stability. Our analyses revealed that the most stable fish communities were nearest natural shorelines. Structurally complex engineered shorelines appeared to promote greater stability than simpler alternatives as communities nearest vertical walls, which are among the most prevalent structures, were most dissimilar from natural shorelines and had the lowest stability. We conclude that conserving and restoring natural habitats is essential for promoting ecological stability. However, in scenarios when natural habitats are not viable, engineered landscapes designed to mimic the complexity of natural habitats may provide similar ecological functions. PMID:26039407

  4. Natural Shorelines Promote the Stability of Fish Communities in an Urbanized Coastal System

    PubMed Central

    Scyphers, Steven B.; Gouhier, Tarik C.; Grabowski, Jonathan H.; Beck, Michael W.; Mareska, John; Powers, Sean P.

    2015-01-01

    Habitat loss and fragmentation are leading causes of species extinctions in terrestrial, aquatic and marine systems. Along coastlines, natural habitats support high biodiversity and valuable ecosystem services but are often replaced with engineered structures for coastal protection or erosion control. We coupled high-resolution shoreline condition data with an eleven-year time series of fish community structure to examine how coastal protection structures impact community stability. Our analyses revealed that the most stable fish communities were nearest natural shorelines. Structurally complex engineered shorelines appeared to promote greater stability than simpler alternatives as communities nearest vertical walls, which are among the most prevalent structures, were most dissimilar from natural shorelines and had the lowest stability. We conclude that conserving and restoring natural habitats is essential for promoting ecological stability. However, in scenarios when natural habitats are not viable, engineered landscapes designed to mimic the complexity of natural habitats may provide similar ecological functions. PMID:26039407

  5. Navigating transformations in governance of Chilean marine coastal resources

    PubMed Central

    Gelcich, Stefan; Hughes, Terry P.; Olsson, Per; Folke, Carl; Defeo, Omar; Fernández, Miriam; Foale, Simon; Gunderson, Lance H.; Rodríguez-Sickert, Carlos; Scheffer, Marten; Steneck, Robert S.; Castilla, Juan C.

    2010-01-01

    Marine ecosystems are in decline. New transformational changes in governance are urgently required to cope with overfishing, pollution, global changes, and other drivers of degradation. Here we explore social, political, and ecological aspects of a transformation in governance of Chile's coastal marine resources, from 1980 to today. Critical elements in the initial preparatory phase of the transformation were (i) recognition of the depletion of resource stocks, (ii) scientific knowledge on the ecology and resilience of targeted species and their role in ecosystem dynamics, and (iii) demonstration-scale experimental trials, building on smaller-scale scientific experiments, which identified new management pathways. The trials improved cooperation among scientists and fishers, integrating knowledge and establishing trust. Political turbulence and resource stock collapse provided a window of opportunity that triggered the transformation, supported by new enabling legislation. Essential elements to navigate this transformation were the ability to network knowledge from the local level to influence the decision-making processes at the national level, and a preexisting social network of fishers that provided political leverage through a national confederation of artisanal fishing collectives. The resultant governance scheme includes a revolutionary national system of marine tenure that allocates user rights and responsibilities to fisher collectives. Although fine tuning is necessary to build resilience of this new regime, this transformation has improved the sustainability of the interconnected social–ecological system. Our analysis of how this transformation unfolded provides insights into how the Chilean system could be further developed and identifies generalized pathways for improved governance of marine resources around the world. PMID:20837530

  6. Navigating transformations in governance of Chilean marine coastal resources.

    PubMed

    Gelcich, Stefan; Hughes, Terry P; Olsson, Per; Folke, Carl; Defeo, Omar; Fernández, Miriam; Foale, Simon; Gunderson, Lance H; Rodríguez-Sickert, Carlos; Scheffer, Marten; Steneck, Robert S; Castilla, Juan C

    2010-09-28

    Marine ecosystems are in decline. New transformational changes in governance are urgently required to cope with overfishing, pollution, global changes, and other drivers of degradation. Here we explore social, political, and ecological aspects of a transformation in governance of Chile's coastal marine resources, from 1980 to today. Critical elements in the initial preparatory phase of the transformation were (i) recognition of the depletion of resource stocks, (ii) scientific knowledge on the ecology and resilience of targeted species and their role in ecosystem dynamics, and (iii) demonstration-scale experimental trials, building on smaller-scale scientific experiments, which identified new management pathways. The trials improved cooperation among scientists and fishers, integrating knowledge and establishing trust. Political turbulence and resource stock collapse provided a window of opportunity that triggered the transformation, supported by new enabling legislation. Essential elements to navigate this transformation were the ability to network knowledge from the local level to influence the decision-making processes at the national level, and a preexisting social network of fishers that provided political leverage through a national confederation of artisanal fishing collectives. The resultant governance scheme includes a revolutionary national system of marine tenure that allocates user rights and responsibilities to fisher collectives. Although fine tuning is necessary to build resilience of this new regime, this transformation has improved the sustainability of the interconnected social-ecological system. Our analysis of how this transformation unfolded provides insights into how the Chilean system could be further developed and identifies generalized pathways for improved governance of marine resources around the world.

  7. Marine coastal sediments microbial hydrocarbon degradation processes: contribution of experimental ecology in the omics’era

    PubMed Central

    Cravo-Laureau, Cristiana; Duran, Robert

    2014-01-01

    Coastal marine sediments, where important biological processes take place, supply essential ecosystem services. By their location, such ecosystems are particularly exposed to human activities as evidenced by the recent Deepwater Horizon disaster. This catastrophe revealed the importance to better understand the microbial processes involved on hydrocarbon degradation in marine sediments raising strong interests of the scientific community. During the last decade, several studies have shown the key role played by microorganisms in determining the fate of hydrocarbons in oil-polluted sediments but only few have taken into consideration the whole sediment’s complexity. Marine coastal sediment ecosystems are characterized by remarkable heterogeneity, owning high biodiversity and are subjected to fluctuations in environmental conditions, especially to important oxygen oscillations due to tides. Thus, for understanding the fate of hydrocarbons in such environments, it is crucial to study microbial activities, taking into account sediment characteristics, physical-chemical factors (electron acceptors, temperature), nutrients, co-metabolites availability as well as sediment’s reworking due to bioturbation activities. Key information could be collected from in situ studies, which provide an overview of microbial processes, but it is difficult to integrate all parameters involved. Microcosm experiments allow to dissect in-depth some mechanisms involved in hydrocarbon degradation but exclude environmental complexity. To overcome these lacks, strategies have been developed, by creating experiments as close as possible to environmental conditions, for studying natural microbial communities subjected to oil pollution. We present here a review of these approaches, their results and limitation, as well as the promising future of applying “omics” approaches to characterize in-depth microbial communities and metabolic networks involved in hydrocarbon degradation. In addition

  8. Intrinsic bioremediation potential of a chronically polluted marine coastal area.

    PubMed

    Catania, Valentina; Santisi, Santina; Signa, Geraldina; Vizzini, Salvatrice; Mazzola, Antonio; Cappello, Simone; Yakimov, Michail M; Quatrini, Paola

    2015-10-15

    A microbiological survey of the Priolo Bay (eastern coast of Sicily, Ionian Sea), a chronically polluted marine coastal area, was carried out in order to discern its intrinsic bioremediation potential. Microbiological analysis, 16S rDNA-based DGGE fingerprinting and PLFAs analysis were performed on seawater and sediment samples from six stations on two transects. Higher diversity and variability among stations was detected by DGGE in sediment than in water samples although seawater revealed higher diversity of culturable hydrocarbon-degrading bacteria. The most polluted sediment hosted higher total bacterial diversity and higher abundance and diversity of culturable HC degraders. Alkane- and PAH-degrading bacteria were isolated from all stations and assigned to Alcanivorax, Marinobacter, Thalassospira, Alteromonas and Oleibacter (first isolation from the Mediterranean area). High total microbial diversity associated to a large selection of HC degraders is believed to contribute to natural attenuation of the area, provided that new contaminant contributions are avoided. PMID:26248825

  9. Intrinsic bioremediation potential of a chronically polluted marine coastal area.

    PubMed

    Catania, Valentina; Santisi, Santina; Signa, Geraldina; Vizzini, Salvatrice; Mazzola, Antonio; Cappello, Simone; Yakimov, Michail M; Quatrini, Paola

    2015-10-15

    A microbiological survey of the Priolo Bay (eastern coast of Sicily, Ionian Sea), a chronically polluted marine coastal area, was carried out in order to discern its intrinsic bioremediation potential. Microbiological analysis, 16S rDNA-based DGGE fingerprinting and PLFAs analysis were performed on seawater and sediment samples from six stations on two transects. Higher diversity and variability among stations was detected by DGGE in sediment than in water samples although seawater revealed higher diversity of culturable hydrocarbon-degrading bacteria. The most polluted sediment hosted higher total bacterial diversity and higher abundance and diversity of culturable HC degraders. Alkane- and PAH-degrading bacteria were isolated from all stations and assigned to Alcanivorax, Marinobacter, Thalassospira, Alteromonas and Oleibacter (first isolation from the Mediterranean area). High total microbial diversity associated to a large selection of HC degraders is believed to contribute to natural attenuation of the area, provided that new contaminant contributions are avoided.

  10. Marine reserves help coastal ecosystems cope with extreme weather.

    PubMed

    Olds, Andrew D; Pitt, Kylie A; Maxwell, Paul S; Babcock, Russell C; Rissik, David; Connolly, Rod M

    2014-10-01

    Natural ecosystems have experienced widespread degradation due to human activities. Consequently, enhancing resilience has become a primary objective for conservation. Nature reserves are a favored management tool, but we need clearer empirical tests of whether they can impart resilience. Catastrophic flooding in early 2011 impacted coastal ecosystems across eastern Australia. We demonstrate that marine reserves enhanced the capacity of coral reefs to withstand flood impacts. Reserve reefs resisted the impact of perturbation, whilst fished reefs did not. Changes on fished reefs were correlated with the magnitude of flood impact, whereas variation on reserve reefs was related to ecological variables. Herbivory and coral recruitment are critical ecological processes that underpin reef resilience, and were greater in reserves and further enhanced on reserve reefs near mangroves. The capacity of reserves to mitigate external disturbances and promote ecological resilience will be critical to resisting an increased frequency of climate-related disturbance. PMID:24849111

  11. Baseline hydrocarbon levels in New Zealand coastal and marine avifauna.

    PubMed

    McConnell, H M; Gartrell, B D; Chilvers, B L; Finlayson, S T; Bridgen, P C E; Morgan, K J

    2015-05-15

    The external effects of oil on wildlife can be obvious and acute. Internal effects are more difficult to detect and can occur without any external signs. To quantify internal effects from oil ingestion by wildlife during an oil spill, baseline levels of ubiquitous hydrocarbon fractions, like polycyclic aromatic hydrocarbons (PAHs), need to be established. With these baseline values the extent of impact from exposure during a spill can be determined. This research represents the first investigation of baseline levels for 22 PAHs in New Zealand coastal and marine avian wildlife. Eighty-five liver samples were tested from 18 species. PAHs were identified in 98% of livers sampled with concentrations ranging from 0 to 1341.6 ng/g lipid wt or on wet wt basis, 0 to 29.5 ng/g. Overall, concentrations were low relative to other globally reported avian values. PAH concentration variability was linked with species foraging habitat and migratory patterns. PMID:25707316

  12. A coastal and marine digital library at USGS

    NASA Astrophysics Data System (ADS)

    Lightsom, Fran

    The Marine Realms Information Bank (MRIB) is a distributed geolibrary [NRC, 1999] from the U.S. Geological Survey (USGS) and the Woods Hole Oceanographic Institution (WHOI), whose purpose is to classify, integrate, and facilitate access to Earth systems science information about ocean, lake, and coastal environments. Core MRIB services are: (1) the search and display of information holdings by place and subject, and (2) linking of information assets that exist in remote physical locations.The design of the MRIB features a classification system to integrate information from remotely maintained sources. This centralized catalogue organizes information using 12 criteria: locations, geologic time, physiographic features, biota, disciplines, research methods, hot topics, project names, agency names, authors, content type, and file type. For many of these fields, MRIB has developed classification hierarchies.

  13. A coastal and marine digital library at USGS

    USGS Publications Warehouse

    Lightsom, Fran

    2003-01-01

    The Marine Realms Information Bank (MRIB) is a distributed geolibrary [NRC, 1999] from the U.S. Geological Survey (USGS) and the Woods Hole Oceanographic Institution (WHOI), whose purpose is to classify, integrate, and facilitate access to Earth systems science information about ocean, lake, and coastal environments. Core MRIB services are: (1) the search and display of information holdings by place and subject, and (2) linking of information assets that exist in remote physical locations. The design of the MRIB features a classification system to integrate information from remotely maintained sources. This centralized catalogue organizes information using 12 criteria: locations, geologic time, physiographic features, biota, disciplines, research methods, hot topics, project names, agency names, authors, content type, and file type. For many of these fields, MRIB has developed classification hierarchies.

  14. Resilience to climate change in coastal marine ecosystems.

    PubMed

    Bernhardt, Joanna R; Leslie, Heather M

    2013-01-01

    Ecological resilience to climate change is a combination of resistance to increasingly frequent and severe disturbances, capacity for recovery and self-organization, and ability to adapt to new conditions. Here, we focus on three broad categories of ecological properties that underlie resilience: diversity, connectivity, and adaptive capacity. Diversity increases the variety of responses to disturbance and the likelihood that species can compensate for one another. Connectivity among species, populations, and ecosystems enhances capacity for recovery by providing sources of propagules, nutrients, and biological legacies. Adaptive capacity includes a combination of phenotypic plasticity, species range shifts, and microevolution. We discuss empirical evidence for how these ecological and evolutionary mechanisms contribute to the resilience of coastal marine ecosystems following climate change-related disturbances, and how resource managers can apply this information to sustain these systems and the ecosystem services they provide.

  15. Marine Invertebrates: Communities at Risk

    PubMed Central

    Mather, Jennifer

    2013-01-01

    Our definition of the word ‘animal’ centers on vertebrates, yet 99% of the animals on the planet are invertebrates, about which we know little. In addition, although the Census of Marine Life (COML.org) has recently conducted an extensive audit of marine ecosystems, we still do not understand much about the animals of the seas. Surveys of the best-known ecosystems, in which invertebrate populations often play a key role, show that the invertebrate populations are affected by human impact. Coral animals are the foundation of coral reef systems, which are estimated to contain 30% of the species in the ocean. Physical impact and chemical changes on the water severely damage these reefs, and may lead to the removal of these important habitats. Tiny pteropod molluscs live in huge numbers in the polar seas, and their fragile shells are particularly vulnerable to ocean acidification. Their removal would mean that fishes on which we depend would have a hugely diminished food supply. In the North Sea, warming is leading to replacement of colder water copepods by warmer water species which contain less fat. This is having an effect on the birds which eat them, who enrich the otherwise poor land on which they nest. Conversely, the warming of the water and the loss of top predators such as whales and sharks has led to an explosion of the jumbo squid of the Pacific coast of North America. This is positive in the development of a squid fishery, yet negative because the squid eat fish that have been the mainstay of the fishery along that coast. These examples show how invertebrates are key in the oceans, and what might happen when global changes impact them. PMID:24832811

  16. Marine invertebrates: communities at risk.

    PubMed

    Mather, Jennifer

    2013-01-01

    Our definition of the word 'animal' centers on vertebrates, yet 99% of the animals on the planet are invertebrates, about which we know little. In addition, although the Census of Marine Life (COML.org) has recently conducted an extensive audit of marine ecosystems, we still do not understand much about the animals of the seas. Surveys of the best-known ecosystems, in which invertebrate populations often play a key role, show that the invertebrate populations are affected by human impact. Coral animals are the foundation of coral reef systems, which are estimated to contain 30% of the species in the ocean. Physical impact and chemical changes on the water severely damage these reefs, and may lead to the removal of these important habitats. Tiny pteropod molluscs live in huge numbers in the polar seas, and their fragile shells are particularly vulnerable to ocean acidification. Their removal would mean that fishes on which we depend would have a hugely diminished food supply. In the North Sea, warming is leading to replacement of colder water copepods by warmer water species which contain less fat. This is having an effect on the birds which eat them, who enrich the otherwise poor land on which they nest. Conversely, the warming of the water and the loss of top predators such as whales and sharks has led to an explosion of the jumbo squid of the Pacific coast of North America. This is positive in the development of a squid fishery, yet negative because the squid eat fish that have been the mainstay of the fishery along that coast. These examples show how invertebrates are key in the oceans, and what might happen when global changes impact them.

  17. Increasing Risk Awareness: The Coastal Community Resilience Index

    ERIC Educational Resources Information Center

    Thompson, Jody A.; Sempier, Tracie; Swann, LaDon

    2012-01-01

    As the number of people moving to the Gulf Coast increases, so does the risk of exposure to floods, hurricanes, and other storm-related events. In an effort to assist communities in preparing for future storm events, the Coastal Community Resilience Index was created. The end result is for communities to take actions to address the weaknesses they…

  18. Sources, impacts and trends of pharmaceuticals in the marine and coastal environment

    PubMed Central

    Gaw, Sally; Thomas, Kevin V.; Hutchinson, Thomas H.

    2014-01-01

    There has been a significant investment in research to define exposures and potential hazards of pharmaceuticals in freshwater and terrestrial ecosystems. A substantial number of integrated environmental risk assessments have been developed in Europe, North America and many other regions for these situations. In contrast, comparatively few empirical studies have been conducted for human and veterinary pharmaceuticals that are likely to enter coastal and marine ecosystems. This is a critical knowledge gap given the significant increase in coastal human populations around the globe and the growth of coastal megacities, together with the increasing importance of coastal aquaculture around the world. There is increasing evidence that pharmaceuticals are present and are impacting on marine and coastal environments. This paper reviews the sources, impacts and concentrations of pharmaceuticals in marine and coastal environments to identify knowledge gaps and suggests focused case studies as a priority for future research. PMID:25405962

  19. Marine data and its potential for coastal and offshore applications

    NASA Astrophysics Data System (ADS)

    Meyer, Elke; Weisse, Ralf

    2013-04-01

    The coastDat data set is a compilation of coastal analyses and scenarios for the future from various sources. It contains no direct measurements but results from numerical models that have been driven either by observed data in order to achieve the best possible representation of observed past conditions or by climate change scenarios for the near future. One of the key objectives for developing coastDat was to derive a consistent and mostly homogeneous database for assessing marine weather statistics and long-term changes. Here, homogeneity refers to a data set which is free from effects caused by changes in instrumentation or measurement techniques. Contrary to direct measurements which are often rare and incomplete, coastDat offers a unique combination of consistent atmospheric, oceanic, sea state and other parameters at high spatial and temporal detail, even for places and variables for which no measurements have been made. The backbones of coastDat are regional wind, wave and storm surge hindcast and scenarios mainly for the North Sea and the Baltic Sea. Furthermore hindcast simulations are available for temperature, salinity, water level, u- and v-components for the North Sea for last 60 years. We will discuss the methodology to derive these data, their quality and limitations in comparison with observations. Long-term changes in the temperature, wind, wave and storm surge climate will be discussed and potential future changes will be assessed. We will conclude with a number of coastal and offshore applications (e.g. ship design, coastal protection, oil risk modelling and marine energy use) of coastDat demonstrating some of the potentials of the data set in hazard assessment. For example data from coastDat have been used extensively for designing, planning and installation of offshore wind farms. Return periods of extreme wind speed, surge and wave heights are used by a variety of users involved in the design and construction of offshore wind parks. Moreover

  20. Integrating digital information for coastal and marine sciences

    USGS Publications Warehouse

    Marincioni, Fausto; Lightsom, Frances L.; Riall, Rebecca L.; Linck, Guthrie A.; Aldrich, Thomas C.; Caruso, Michael J.

    2004-01-01

    A pilot distributed geolibrary, the Marine Realms Information Bank (MRIB), was developed by the U.S. Geological Survey Coastal and Marine Geology Program and the Woods Hole Oceanographic Institution, to classify, integrate, and facilitate access to scientific information about oceans, coasts, and lakes. The MRIB is composed of a categorization scheme, a metadata database, and a specialized software backend, capable of drawing together information from remote sources without modifying their original format or content. Twelve facets are used to classify information: location, geologic time, feature type, biota, discipline, research method, hot topics, project, agency, author, content type, and file type. The MRIB approach allows easy and flexible organization of large or growing document collections for which centralized repositories would be impractical. Geographic searching based on the gazetteer and map interface is the centerpiece of the MRIB distributed geolibrary. The MRIB is one of a very few digital libraries that employ georeferencing -- a fundamentally different way to structure information from the traditional author/title/subject/keyword approach employed by most digital libraries. Lessons learned in developing the MRIB will be useful as other digital libraries confront the challenges of georeferencing.

  1. Engaging Communities Where They Are: New Hampshire's Coastal Adaptation Workgroup

    NASA Astrophysics Data System (ADS)

    Wake, C. P.; Godlewski, S.; Howard, K.; Labranche, J.; Miller, S.; Peterson, J.; Ashcraft, C.

    2015-12-01

    Rising seas are expected to have significant impacts on infrastructure and natural and cultural resources on New Hampshire's 18 mile open-ocean coastline and 235 miles of tidal shoreline. However, most coastal municipalities in NH lack financial and human resources to even assess vulnerability, let alone plan for climate change. This gap has been filled since 2010 by the NH Coastal Adaptation Workgroup (CAW), composed of 21 regional, state, and federal agencies, businesses, municipalities, academics, and NGOs that bring together stakeholders to discuss climate change challenges and collaboratively develop and implement effective coastal adaptation strategies. Our grassroot efforts serve to nurture existing and build new relationships, disseminate coastal watershed climate assessments, and tap into state, federal, and foundation funds for specific coastal adaptation projects. CAW has achieved collective impact in by connecting federal and state resources to communities by raising money and facilitating projects, translating climate science, educating community members, providing direct technical assistance and general capacity, and sharing success stories and lessons learned. Indicators of success include: 12 coastal communities improved their technical, financial, and human resources for climate adaptation; 80% of the 300 participants in the eleven CAW 'Water, Weather, Climate, and Community Workshops' have increased knowledge, motivation, and capacity to address climate adaptation; $3 million in grants to help communities with climate adaptation; winner of the 2015 EPA Region 1 Environmental Merit Award; and ongoing support for community-led adaptation efforts. In addition, the NH Climate Summit attracts over 100 participants each year, over 90% whom attest to the applicability of what they learn there. CAW also plays a central role in the Coastal Risks and Hazards Commission (established by the state legislature in 2013) to help communities and businesses prepare

  2. Marine oil spill risk mapping for accidental pollution and its application in a coastal city.

    PubMed

    Lan, Dongdong; Liang, Bin; Bao, Chenguang; Ma, Minghui; Xu, Yan; Yu, Chunyan

    2015-07-15

    Accidental marine oil spill pollution can result in severe environmental, ecological, economic and other consequences. This paper discussed the model of Marine Oil Spill Risk Mapping (MOSRM), which was constructed as follows: (1) proposing a marine oil spill risk system based on the typical marine oil spill pollution accidents and prevailing risk theories; (2) identifying suitable indexes that are supported by quantitative sub-indexes; (3) constructing the risk measuring models according to the actual interactions between the factors in the risk system; and (4) assessing marine oil spill risk on coastal city scale with GIS to map the overall risk. The case study of accidental marine oil spill pollution in the coastal area of Dalian, China was used to demonstrate the effectiveness of the model. The coastal areas of Dalian were divided into three zones with risk degrees of high, medium, and low. And detailed countermeasures were proposed for specific risk zones.

  3. Numerical dominance of a group of marine bacteria in the alpha-subclass of the class Proteobacteria in coastal seawater.

    PubMed

    González, J M; Moran, M A

    1997-11-01

    A cluster of marine bacteria within the alpha-3 subclass of the class Proteobacteria accounted for up to 28% of the 16S ribosomal DNA (rDNA) sequences in seawater samples from the coast of the southeastern United States. Two independent oligonucleotide probes targeting 16S rDNA of this "marine alpha" cluster indicate that the group dominates bacterioplankton communities in estuarine and nearshore regions of the southeastern U.S. coast. Marine alpha bacteria decline predictably in abundance with decreasing salinity along estuarine transsects and are not detectable in low-salinity (5%) or freshwater samples. Sequences of 16S rDNA obtained from seawater by PCR with one group-specific oligonucleotide as a primer confirm that the oligonucleotide targets only members of this phylogenetic cluster. Likewise, sequences of 16S rDNA obtained from seawater by PCR with several different pairs of nonspecific primers show an unusually high abundance of marine alpha sequences (52 to 84%) among the clones, which possibly indicates a PCR bias toward the group. Members of the marine alpha group were readily cultured from coastal seawater, accounting for 40% of the colonies isolated on low-nutrient marine agar, based on hybridizations with the group-specific 16S rDNA probe and on sequence analysis. This is the first description of a numerically dominant cluster of coastal bacteria, identified by molecular techniques, that can be readily cultured and studied in the laboratory.

  4. Mapping of Florida's Coastal and Marine Resources: Setting Priorities Workshop

    USGS Publications Warehouse

    Robbins, Lisa; Wolfe, Steven; Raabe, Ellen

    2008-01-01

    The importance of mapping habitats and bioregions as a means to improve resource management has become increasingly clear. Large areas of the waters surrounding Florida are unmapped or incompletely mapped, possibly hindering proper management and good decisionmaking. Mapping of these ecosystems is among the top priorities identified by the Florida Oceans and Coastal Council in their Annual Science Research Plan. However, lack of prioritization among the coastal and marine areas and lack of coordination of agency efforts impede efficient, cost-effective mapping. A workshop on Mapping of Florida's Coastal and Marine Resources was sponsored by the U.S. Geological Survey (USGS), Florida Department of Environmental Protection (FDEP), and Southeastern Regional Partnership for Planning and Sustainability (SERPPAS). The workshop was held at the USGS Florida Integrated Science Center (FISC) in St. Petersburg, FL, on February 7-8, 2007. The workshop was designed to provide State, Federal, university, and non-governmental organizations (NGOs) the opportunity to discuss their existing data coverage and create a prioritization of areas for new mapping data in Florida. Specific goals of the workshop were multifold, including to: * provide information to agencies on state-of-the-art technology for collecting data; * inform participants of the ongoing mapping programs in waters off Florida; * present the mapping needs and priorities of the State and Federal agencies and entities operating in Florida; * work with State of Florida agencies to establish an overall priority for areas needing mapping; * initiate discussion of a unified classification of habitat and bioregions; * discuss and examine the need to standardize terminology and data collection/storage so that data, in particular habitat data, can be shared; 9 identify opportunities for partnering and leveraging mapping efforts among agencies and entities; * identify impediments and organizational gaps that hinder collection

  5. Night-time lighting alters the composition of marine epifaunal communities.

    PubMed

    Davies, Thomas W; Coleman, Matthew; Griffith, Katherine M; Jenkins, Stuart R

    2015-04-01

    Marine benthic communities face multiple anthropogenic pressures that compromise the future of some of the most biodiverse and functionally important ecosystems in the world. Yet one of the pressures these ecosystems face, night-time lighting, remains unstudied. Light is an important cue in guiding the settlement of invertebrate larvae, and altering natural regimes of nocturnal illumination could modify patterns of recruitment among sessile epifauna. We present the first evidence of night-time lighting changing the composition of temperate epifaunal marine invertebrate communities. Illuminating settlement surfaces with white light-emitting diode lighting at night, to levels experienced by these communities locally, both inhibited and encouraged the colonization of 39% of the taxa analysed, including three sessile and two mobile species. Our results indicate that ecological light pollution from coastal development, shipping and offshore infrastructure could be changing the composition of marine epifaunal communities.

  6. Night-time lighting alters the composition of marine epifaunal communities.

    PubMed

    Davies, Thomas W; Coleman, Matthew; Griffith, Katherine M; Jenkins, Stuart R

    2015-04-01

    Marine benthic communities face multiple anthropogenic pressures that compromise the future of some of the most biodiverse and functionally important ecosystems in the world. Yet one of the pressures these ecosystems face, night-time lighting, remains unstudied. Light is an important cue in guiding the settlement of invertebrate larvae, and altering natural regimes of nocturnal illumination could modify patterns of recruitment among sessile epifauna. We present the first evidence of night-time lighting changing the composition of temperate epifaunal marine invertebrate communities. Illuminating settlement surfaces with white light-emitting diode lighting at night, to levels experienced by these communities locally, both inhibited and encouraged the colonization of 39% of the taxa analysed, including three sessile and two mobile species. Our results indicate that ecological light pollution from coastal development, shipping and offshore infrastructure could be changing the composition of marine epifaunal communities. PMID:25926694

  7. Night-time lighting alters the composition of marine epifaunal communities

    PubMed Central

    Davies, Thomas W.; Coleman, Matthew; Griffith, Katherine M.; Jenkins, Stuart R.

    2015-01-01

    Marine benthic communities face multiple anthropogenic pressures that compromise the future of some of the most biodiverse and functionally important ecosystems in the world. Yet one of the pressures these ecosystems face, night-time lighting, remains unstudied. Light is an important cue in guiding the settlement of invertebrate larvae, and altering natural regimes of nocturnal illumination could modify patterns of recruitment among sessile epifauna. We present the first evidence of night-time lighting changing the composition of temperate epifaunal marine invertebrate communities. Illuminating settlement surfaces with white light-emitting diode lighting at night, to levels experienced by these communities locally, both inhibited and encouraged the colonization of 39% of the taxa analysed, including three sessile and two mobile species. Our results indicate that ecological light pollution from coastal development, shipping and offshore infrastructure could be changing the composition of marine epifaunal communities. PMID:25926694

  8. USGS Coastal and Marine Geology Survey Data in Google Earth

    NASA Astrophysics Data System (ADS)

    Reiss, C.; Steele, C.; Ma, A.; Chin, J.

    2006-12-01

    The U.S. Geological Survey (USGS) Coastal and Marine Geology (CMG) program has a rich data catalog of geologic field activities and metadata called InfoBank, which has been a standard tool for researchers within and outside of the agency. Along with traditional web maps, the data are now accessible in Google Earth, which greatly expands the possible user audience. The Google Earth interface provides geographic orientation and panning/zooming capabilities to locate data relative to topography, bathymetry, and coastal areas. Viewing navigation with Google Earth's background imagery allows queries such as, why areas were not surveyed (answer presence of islands, shorelines, cliffs, etc.). Detailed box core subsample photos from selected sampling activities, published geotechnical data, and sample descriptions are now viewable on Google Earth, (for example, M-1-95-MB, P-2-95-MB, and P-1-97- MB box core samples). One example of the use of Google Earth is CMG's surveys of San Francisco's Ocean Beach since 2004. The surveys are conducted with an all-terrain vehicle (ATV) and shallow-water personal watercraft (PWC) equipped with Global Positioning System (GPS), and elevation and echo sounder data collectors. 3D topographic models with centimeter accuracy have been produced from these surveys to monitor beach and nearshore processes, including sand transport, sedimentation patterns, and seasonal trends. Using Google Earth, multiple track line data (examples: OB-1-05-CA and OB-2-05-CA) can be overlaid on beach imagery. The images also help explain the shape of track lines as objects are encountered.

  9. Contributions of Participatory Modeling to Development and Support of Coastal and Marine Management Plans

    EPA Science Inventory

    The role of participatory modeling- at various scales- to assist in developing shared visions, understanding the decision landscape, identifying and selecting management options, and monitoring outcomes will be explored in the context of coastal and marine planning, ecosystem ser...

  10. 75 FR 51838 - Public Review of Draft Coastal and Marine Ecological Classification Standard

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-08-23

    ..., protection, and restoration of unique biotic assemblages, protected species, critical habitat, and important... at its July 20, 2010 meeting. The FGDC invites all stakeholders in coastal and marine ecology...

  11. Community Education in Eastern Chinese Coastal Cities: Issues and Development

    ERIC Educational Resources Information Center

    Lu, Suju

    2009-01-01

    This paper first reviews the development of community education in Shanghai, one of China's eastern coastal cities. Then the development of community education in the Xuhui District of Shanghai, especially its management system and operational mechanisms, school operating systems and networks, curriculum systems, and team building are presented.…

  12. 15 CFR 921.4 - Relationship to other provisions of the Coastal Zone Management Act, and to the Marine Protection...

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... the Coastal Zone Management Act, and to the Marine Protection, Research and Sanctuaries Act. 921.4... provisions of the Coastal Zone Management Act, and to the Marine Protection, Research and Sanctuaries Act. (a... affecting the state's coastal zone, must be undertaken in a manner consistent to the maximum...

  13. 15 CFR 921.4 - Relationship to other provisions of the Coastal Zone Management Act, and to the Marine Protection...

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... the Coastal Zone Management Act, and to the Marine Protection, Research and Sanctuaries Act. 921.4... provisions of the Coastal Zone Management Act, and to the Marine Protection, Research and Sanctuaries Act. (a... affecting the state's coastal zone, must be undertaken in a manner consistent to the maximum...

  14. 15 CFR 921.4 - Relationship to other provisions of the Coastal Zone Management Act, and to the Marine Protection...

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... the Coastal Zone Management Act, and to the Marine Protection, Research and Sanctuaries Act. 921.4... provisions of the Coastal Zone Management Act, and to the Marine Protection, Research and Sanctuaries Act. (a... affecting the state's coastal zone, must be undertaken in a manner consistent to the maximum...

  15. 15 CFR 921.4 - Relationship to other provisions of the Coastal Zone Management Act, and to the Marine Protection...

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... the Coastal Zone Management Act, and to the Marine Protection, Research and Sanctuaries Act. 921.4... provisions of the Coastal Zone Management Act, and to the Marine Protection, Research and Sanctuaries Act. (a... affecting the state's coastal zone, must be undertaken in a manner consistent to the maximum...

  16. 15 CFR 921.4 - Relationship to other provisions of the Coastal Zone Management Act, and to the Marine Protection...

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... the Coastal Zone Management Act, and to the Marine Protection, Research and Sanctuaries Act. 921.4... provisions of the Coastal Zone Management Act, and to the Marine Protection, Research and Sanctuaries Act. (a... affecting the state's coastal zone, must be undertaken in a manner consistent to the maximum...

  17. Habitat partitioning of marine benthic denitrifier communities in response to oxygen availability.

    PubMed

    Wittorf, Lea; Bonilla-Rosso, Germán; Jones, Christopher M; Bäckman, Ola; Hulth, Stefan; Hallin, Sara

    2016-08-01

    Denitrification is of global significance for the marine nitrogen budget and the main process for nitrogen loss in coastal sediments. This facultative anaerobic respiratory pathway is modular in nature and the final step, the reduction of nitrous oxide (N2 O), is performed by microorganisms with a complete denitrification pathway as well as those only capable of N2 O reduction. Fluctuating oxygen availability is a significant driver of denitrification in sediments, but the effects on the overall N2 O-reducing community that ultimately controls the emission of N2 O from marine sediments is not well known. To investigate the effects of different oxygen regimes on N2 O reducing communities, coastal marine surface sediment was incubated in microcosms under oxic, anoxic or oscillating oxygen conditions in the overlying water for 137 days. Quantification of the genetic potential for denitrification, anammox and respiratory ammonification indicated that denitrification supported nitrogen removal in these sediments. Furthermore, denitrifiers with a complete pathway were identified as the dominant community involved in N2 O reduction, rather than organisms that are only N2 O reducers. Specific lineages within each group were associated with different oxygen regimes suggesting that oxygen availability in the overlying water is associated with habitat partitioning of N2 O reducers in coastal marine surface sediments.

  18. St. Petersburg Coastal and Marine Science Center's Core Archive Portal

    USGS Publications Warehouse

    Reich, Chris; Streubert, Matt; Dwyer, Brendan; Godbout, Meg; Muslic, Adis; Umberger, Dan

    2012-01-01

    This Web site contains information on rock cores archived at the U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center (SPCMSC). Archived cores consist of 3- to 4-inch-diameter coral cores, 1- to 2-inch-diameter rock cores, and a few unlabeled loose coral and rock samples. This document - and specifically the archive Web site portal - is intended to be a 'living' document that will be updated continually as additional cores are collected and archived. This document may also contain future references and links to a catalog of sediment cores. Sediment cores will include vibracores, pushcores, and other loose sediment samples collected for research purposes. This document will: (1) serve as a database for locating core material currently archived at the USGS SPCMSC facility; (2) provide a protocol for entry of new core material into the archive system; and, (3) set the procedures necessary for checking out core material for scientific purposes. Core material may be loaned to other governmental agencies, academia, or non-governmental organizations at the discretion of the USGS SPCMSC curator.

  19. Sources of atmospheric methane from coastal marine wetlands

    NASA Technical Reports Server (NTRS)

    Harriss, R. C.; Sebacher, D. I.; Bartlett, K. B.; Bartlett, D. S.

    1982-01-01

    Biological methanogenesis in wetlands is believed to be one of the major sources of global tropospheric methane. The present paper reports measurements of methane distribution in the soils, sediments, water and vegetation of coastal marine wetlands. Measurements, carried out in the salt marshes Bay Tree Creek in Virginia and Panacea in northwest Florida, reveal methane concentrations in soils and sediments to vary with depth below the surface and with soil temperature. The fluxes of methane from marsh soils to the atmosphere at the soil-air interface are estimated to range from -0.00067 g CH4/sq m per day (methane sink) to 0.024 g CH4/sq m per day, with an average value of 0.0066 g CH4/sq m per day. Data also demonstrate the important role of tidal waters percolating through marsh soils in removing methane from the soils and releasing it to the atmosphere. The information obtained, together with previous studies, provides a framework for the design of a program based on in situ and remote sensing measurements to study the global methane cycle.

  20. Microbial processes and organic priority substances in marine coastal sediments (Adriatic Sea, Italy)

    NASA Astrophysics Data System (ADS)

    Zoppini, Annamaria; Ademollo, Nicoletta; Amalfitano, Stefano; Dellisanti, Walter; Lungarini, Silvia; Miserocchi, Stefano; Patrolecco, Luisa; Langone, Leonardo

    2015-04-01

    PERSEUS EU FP7 Project aims to identify the interacting patterns of natural and human-derived pressures to assess their impact on marine ecosystems and, using the objectives and principles of the Marine Strategy Framework Directive (MSFD) as a vehicle, to design an effective and innovative research governance framework based on sound scientific knowledge. In the frame of this Project (subtask 1.3.3 ADREX: Adriatic and Ionian Seas Experiment), monitoring surveys were conducted in the Adriatic Sea (Italy) in order to study the variation of structural and functional characteristics of native bacterial communities and the occurrence of selected classes of organic priority substances in sediments. The study area represents a good natural laboratory sensitive to climate variability and human pressure, owing to the semi-enclosed nature of the Adriatic Sea and to the increasing trend of human activities in the coastal regions. During the cruise ADRI-13 (November 2013) and ADRI-14 (October 2014) we sampled several coastal sites from the mouth of the Po River to the Otranto strait. Surface sediments were collected in all areas, while sediment cores were sampled in selected sites. Microbes associated with marine sediments play an important role in the C-flux being responsible for the transformation of organic detritus (autochthonous and allochthonous) into biomass. The sediment bacterial abundance was determined by epifluorescence microscopy and the rate of bacterial carbon production by measuring the 3H-leucine uptake rates. The community respiration rate was estimated by the measurement of the electron transport system (ETS) activity. The sediment contamination level was determined by measuring the concentration of contaminants included in the list of organic priority substances: PAHs, bisphenol A (BPA), alkylphenols (APs). The extraction/clean-up of PAHs, BPA and APs was performed by ultrasonic bath with the appropriate solvents, followed by analytical determination with

  1. An integrated approach to manage coastal ecosystems and prevent marine pollution effects

    NASA Astrophysics Data System (ADS)

    Marcelli, Marco; Bonamano, Simone; Carli, Filippo Maria; Giovacchini, Monica; Madonia, Alice; Mancini, Emanuele; Molino, Chiara; Piermattei, Viviana; Manfredi Frattarelli, Francesco

    2016-04-01

    This work focuses an integrated approach based on Sea-Use-Map (SUM), backed by a permanent monitoring system (C-CEMS-Civitavecchia Coastal Environmental Monitoring System). This tool supports the management of the marine coastal area, contributing substantially to ecosystem benefits evaluation and to minimize pollution impacts. Within the Blue Growth strategy, the protection of marine ecosystems is considered a priority for the sustainable growth of marine and maritime sectors. To face this issue, the European MSP and MSFD directives (2014/89/EU; 2008/56/EC) strongly promote the adoption of an ecosystem-based approach, paying particular attention to the support of monitoring networks that use L-TER (long-term ecological research) observations and integrate multi-disciplinary data sets. Although not largely used in Europe yet, the Environmental Sensitivity Index (ESI), developed in 1979 by NOAA (and promoted by IMO in 2010), can be considered an excellent example of ecosystem-based approach to reduce the environmental consequences of an oil spill event in a coastal area. SUM is an ecosystem oriented cartographic tool specifically designed to support the sustainable management of the coastal areas, such as the selection of the best sites for the introduction of new uses or the identification of the coastal areas subjected to potential impacts. It also enables a rapid evaluation of the benefits produced by marine areas as well as of their anthropogenic disturbance. SUM integrates C-CEMS dataset, geomorphological and ecological features and knowledge on the coastal and maritime space uses. The SUM appliance allowed to obtain relevant operational results in the Civitavecchia coastal area (Latium, Italy), characterized by high variability of marine and coastal environments, historical heritage and affected by the presence of a big harbour, relevant industrial infrastructures, and touristic features. In particular, the valuation of marine ecosystem services based on

  2. Perceptions of risk among households in two Australian coastal communities

    SciTech Connect

    Elrick-Barr, Carmen E.; Smith, Timothy F.; Thomsen, Dana C.; Preston, Benjamin L.

    2015-04-20

    There is limited knowledge of risk perceptions in coastal communities despite their vulnerability to a range of risks including the impacts of climate change. A survey of 400 households in two Australian coastal communities, combined with semi-structured interviews, provides insight into household perceptions of the relative importance of climatic and non-climatic risks and the subsequent risk priorities that may inform household adaptive action. In contrast to previous research, the results demonstrated that geographic location and household characteristics might not affect perceptions of vulnerability to environmental hazards. However, past experience was a significant influence, raising the priority of environmental concerns. Overall, the results highlight the priority concerns of coastal households (from finance, to health and environment) and suggest to increase the profile of climate issues in coastal communities climate change strategies need to better demonstrate links between climate vulnerability and other household concerns. Moreover, promoting generic capacities in isolation from understanding the context in which households construe climate risks is unlikely to yield the changes required to decrease the vulnerability of coastal communities.

  3. Perceptions of risk among households in two Australian coastal communities

    DOE PAGES

    Elrick-Barr, Carmen E.; Smith, Timothy F.; Thomsen, Dana C.; Preston, Benjamin L.

    2015-04-20

    There is limited knowledge of risk perceptions in coastal communities despite their vulnerability to a range of risks including the impacts of climate change. A survey of 400 households in two Australian coastal communities, combined with semi-structured interviews, provides insight into household perceptions of the relative importance of climatic and non-climatic risks and the subsequent risk priorities that may inform household adaptive action. In contrast to previous research, the results demonstrated that geographic location and household characteristics might not affect perceptions of vulnerability to environmental hazards. However, past experience was a significant influence, raising the priority of environmental concerns. Overall,more » the results highlight the priority concerns of coastal households (from finance, to health and environment) and suggest to increase the profile of climate issues in coastal communities climate change strategies need to better demonstrate links between climate vulnerability and other household concerns. Moreover, promoting generic capacities in isolation from understanding the context in which households construe climate risks is unlikely to yield the changes required to decrease the vulnerability of coastal communities.« less

  4. Best Practices in Marine and Coastal Science Education: Lessons Learned from a National Estuarine Research Reserve.

    ERIC Educational Resources Information Center

    McDonnell, Janice D.

    The Jacques Cousteau National Estuarine Research Reserve (JC NERR) program has successfully capitalized on human fascination with the ocean by using the marine environment to develop interest and capability in science. The Institute of Marine & Coastal Sciences, as the managing agency of the JC NERR, makes its faculty, staff resources, and…

  5. Higher diversity of ammonia/ammonium-oxidizing prokaryotes in constructed freshwater wetland than natural coastal marine wetland.

    PubMed

    Wang, Yong-Feng; Gu, Ji-Dong

    2013-08-01

    Anaerobic ammonium-oxidizing (anammox) bacteria, aerobic ammonia-oxidizing archaea (AOA), and ammonia-oxidizing bacteria (AOB) are three groups of ammonium/ammonia-oxidizing prokaryotes (AOPs) that are involved in the nitrogen cycle. This research compared the AOP communities in a constructed freshwater wetland with a natural coastal marine wetland in the subtropical Hong Kong. Both vegetated/rhizosphere and nonvegetated sediments were investigated to identify the effects of different macrophytes on the AOP communities. The polymerase chain reaction (PCR)-amplified gene fragments of 16S rRNA and archaeal and bacterial amoA (encoding the ammonia monooxygenase alpha subunit) were applied as molecular biomarkers to analyze the AOPs' phylogeny and diversity. Quantitative PCR was used to determine the abundances of AOPs in the sediments. The results showed that the relatively more heterogeneous freshwater wetland contained a broader range of phylotypes, higher diversity, more complex community structures, and more unevenly distributed abundances of AOPs than the coastal wetland. The effects of vegetation on the community structures of AOPs were plant-specific. The exotic Typha angustifolia affected the community structures of all AOPs and enhanced their abundances in the rhizosphere region. Both Phragmites australis and Cyperus malaccensis showed some effects on the community structures of AOB, but minimal effects on those of anammox bacteria or AOA. Kandelia obovata had almost no detectable effect on all AOPs due to their smaller size. This study suggested that the freshwater and coastal marine wetlands may have different contributions to the inorganic N removal due to the variations in AOP communities and plant types. PMID:23053083

  6. Vulnerability of Coastal Communities from Storm Surge and Flood Disasters.

    PubMed

    Bathi, Jejal Reddy; Das, Himangshu S

    2016-02-01

    Disasters in the form of coastal storms and hurricanes can be very destructive. Preparing for anticipated effects of such disasters can help reduce the public health and economic burden. Identifying vulnerable population groups can help prioritize resources for the most needed communities. This paper presents a quantitative framework for vulnerability measurement that incorporates both socioeconomic and flood inundation vulnerability. The approach is demonstrated for three coastal communities in Mississippi with census tracts being the study unit. The vulnerability results are illustrated as thematic maps for easy usage by planners and emergency responders to assist in prioritizing their actions to vulnerable populations during storm surge and flood disasters. PMID:26907313

  7. Vulnerability of Coastal Communities from Storm Surge and Flood Disasters

    PubMed Central

    Bathi, Jejal Reddy; Das, Himangshu S.

    2016-01-01

    Disasters in the form of coastal storms and hurricanes can be very destructive. Preparing for anticipated effects of such disasters can help reduce the public health and economic burden. Identifying vulnerable population groups can help prioritize resources for the most needed communities. This paper presents a quantitative framework for vulnerability measurement that incorporates both socioeconomic and flood inundation vulnerability. The approach is demonstrated for three coastal communities in Mississippi with census tracts being the study unit. The vulnerability results are illustrated as thematic maps for easy usage by planners and emergency responders to assist in prioritizing their actions to vulnerable populations during storm surge and flood disasters. PMID:26907313

  8. Vulnerability of Coastal Communities from Storm Surge and Flood Disasters.

    PubMed

    Bathi, Jejal Reddy; Das, Himangshu S

    2016-02-19

    Disasters in the form of coastal storms and hurricanes can be very destructive. Preparing for anticipated effects of such disasters can help reduce the public health and economic burden. Identifying vulnerable population groups can help prioritize resources for the most needed communities. This paper presents a quantitative framework for vulnerability measurement that incorporates both socioeconomic and flood inundation vulnerability. The approach is demonstrated for three coastal communities in Mississippi with census tracts being the study unit. The vulnerability results are illustrated as thematic maps for easy usage by planners and emergency responders to assist in prioritizing their actions to vulnerable populations during storm surge and flood disasters.

  9. Anthropogenic marine debris in the coastal environment: a multi-year comparison between coastal waters and local shores.

    PubMed

    Thiel, M; Hinojosa, I A; Miranda, L; Pantoja, J F; Rivadeneira, M M; Vásquez, N

    2013-06-15

    Anthropogenic marine debris (AMD) is frequently studied on sandy beaches and occasionally in coastal waters, but links between these two environments have rarely been studied. High densities of AMD were found in coastal waters and on local shores of a large bay system in northern-central Chile. No seasonal pattern in AMD densities was found, but there was a trend of increasing densities over the entire study period. While plastics and Styrofoam were the most common types of AMD both on shores and in coastal waters, AMD composition differed slightly between the two environments. The results suggest that AMD from coastal waters are deposited on local shores, which over time accumulate all types of AMD. The types and the very low percentages of AMD with epibionts point to mostly local sources. Based on these results, it can be concluded that a reduction of AMD will require local solutions.

  10. Anthropogenic marine debris in the coastal environment: a multi-year comparison between coastal waters and local shores.

    PubMed

    Thiel, M; Hinojosa, I A; Miranda, L; Pantoja, J F; Rivadeneira, M M; Vásquez, N

    2013-06-15

    Anthropogenic marine debris (AMD) is frequently studied on sandy beaches and occasionally in coastal waters, but links between these two environments have rarely been studied. High densities of AMD were found in coastal waters and on local shores of a large bay system in northern-central Chile. No seasonal pattern in AMD densities was found, but there was a trend of increasing densities over the entire study period. While plastics and Styrofoam were the most common types of AMD both on shores and in coastal waters, AMD composition differed slightly between the two environments. The results suggest that AMD from coastal waters are deposited on local shores, which over time accumulate all types of AMD. The types and the very low percentages of AMD with epibionts point to mostly local sources. Based on these results, it can be concluded that a reduction of AMD will require local solutions. PMID:23507233

  11. Interactions of aquaculture, marine coastal ecosystems, and near-shore waters: A bibliography. Bibliographies and literature of agriculture (Final)

    SciTech Connect

    Hanfman, D.T.; Coleman, D.E.; Tibbitt, S.J.

    1991-01-01

    The bibliography contains selected literature citations on the interactions of aquaculture and marine coastal ecosystems. The focus is on aquaculture effluents and their impact on marine coastal ecosystems and waterways as well as the impact of pollutants on aquaculture development. Factors affecting these issues include domestic and industrial wastes, thermal discharges, acid rain, heavy metals, oil spills, and microbial contamination of marine waters and aquatic species. Coastal zone management, environmenal impact of aquaculture, and water quality issues are also included in the bibliography.

  12. Dynamics of size-fractionated bacterial communities during the coastal dispersal of treated municipal effluents.

    PubMed

    Liu, SiGuang; Luo, YuanRong; Huang, LingFeng

    2016-07-01

    Everyday huge amount of treated municipal wastewater is discharged into the coastal seawater. However, microbial biomarkers for the municipal effluent instead of the fecal species from raw sewage have not been proposed. Meanwhile, bacterial taxa for degrading large amounts of input organics have not been fully understood. In this study, raw effluent and serial water samples were collected from the coastal dispersal of two sewage treatment plants in Xiamen, China. Free-living (FL) and particle-associated (PA) bacterial communities were analyzed via high-throughput sequencing of 16S rRNA gene and quantitative PCR to measure bacterial abundance. The PA bacterial communities in our samples exhibited higher cell abundance, alpha diversity, and population dynamics than the FL bacterial communities, which supports greater environmental significance of the PA bacterial communities. Two non-fecal but typical genera in activated sludge, Zoogloea and Dechloromonas, exhibited decreased but readily detectable abundance along the effluent dispersal distance. Furthermore, the dominating microbial species near the outfalls were related to well-known marine indigenous taxa, such as SAR11 clade, OM60 clade, low-GC Actinobacteria, and unclassified Flavobacteriales, as well as the less understood taxa like Pseudohongiella and Microbacteriaceae. It is interesting that these taxa exhibited two types of correlation patterns with COD concentration. Our study suggested Zoogloea as a potential indicator of municipal effluents and also proposed potential utilizers of residual effluent COD in marine environments. PMID:26944731

  13. High tolerance of microzooplankton to ocean acidification in an Arctic coastal plankton community

    NASA Astrophysics Data System (ADS)

    Aberle, N.; Schulz, K. G.; Stuhr, A.; Malzahn, A. M.; Ludwig, A.; Riebesell, U.

    2013-03-01

    Impacts of ocean acidification (OA) on marine biota have been observed in a wide range of marine systems. We used a mesocosm approach to study the response of a high Arctic coastal microzooplankton community during the post-bloom period in Kongsfjorden (Svalbard) to direct and indirect effects of high pCO2/low pH. We found almost no direct effects of OA on microzooplankton composition and diversity. Both the relative shares of ciliates and heterotrophic dinoflagellates as well as the taxonomic composition of microzooplankton remained unaffected by changes in pCO2/pH. Although the different pCO2 treatments affected food availability and phytoplankton composition, no indirect effects (e.g. on the total carrying capacity and phenology of microzooplankton) could be observed. Our data point to a high tolerance of this Arctic microzooplankton community to changes in pCO2/pH. Future studies on the impact of OA on plankton communities should include microzooplankton in order to test whether the observed low sensitivity to OA is typical for coastal communities where changes in seawater pH occur frequently.

  14. High tolerance of protozooplankton to ocean acidification in an Arctic coastal plankton community

    NASA Astrophysics Data System (ADS)

    Aberle, N.; Schulz, K. G.; Stuhr, A.; Ludwig, A.; Riebesell, U.

    2012-09-01

    Impacts of ocean acidification (OA) on marine biota have been observed in a wide range of marine systems. We used a mesocosm approach to study the response of a high Arctic coastal protozooplankton (PZP in the following) community during the post-bloom period in the Kongsfjorden (Svalbard) to direct and indirect effects of high pCO2/low pH. We found almost no direct effects of OA on PZP composition and diversity. Both, the relative shares of ciliates and heterotrophic dinoflagellates as well as the taxonomic composition of protozoans remained unaffected by changes in pCO2/pH. The different pCO2 treatments did not have any effect on food availability and phytoplankton composition and thus no indirect effects e.g. on the total carrying capacity and phenology of PZP could be observed. Our data points at a high tolerance of this Arctic PZP community to changes in pCO2/pH. Future studies on the impact of OA on plankton communities should include PZP in order to test whether the observed low sensitivity of protozoans to OA is typical for coastal communities where changes in seawater pH occur frequently.

  15. A Robot for Coastal Marine Studies Under Hostile Conditions

    NASA Astrophysics Data System (ADS)

    Consi, T. R.

    2012-12-01

    Robots have long been used for scientific exploration of extremely remote environments such as planetary surfaces and the deep ocean. In addition to these physically remote places, there are many environments that are transiently remote in the sense that they are inaccessible to humans for a period of time. Coastal marine environments fall into this category. While quite accessible (and enjoyable) during good weather, the coast can become as remote as the moon when it is impacted by severe storms or hurricanes. For near shore and shallow water marine science unmanned underwater ground vehicles (UUGVs) are the robots of choice for reliable access under a variety of conditions. Ground vehicles are inherently amphibious being able to operate in complex coastal environments that can range from the completely dry beach, through the transiently wet swash zone, into the surf zone and beyond. During storms, UUGVs provide stable sensor platforms resistant to waves and currents by virtue of being locked to the substrate. In such situations free-swimming robots would be swept away. Mobility during storms enables a UUGV to orient itself to optimally resist forces that would dislodge fixed, moored platforms. Mobility can also enable a UUGV to either avoid burial, or unbury itself after a storm. Finally, the ability to submerge provides a great advantage over buoys and surface vehicles which would be smashed by heavy wave action. We have developed a prototype UUGV to enable new science in the surf zone and other shallow water environments. Named LMAR for Lake Michigan Amphibious Robot, it is designed to be deployed from the dry beach, enter the water to perform a near-shore survey, and return to the deployment point for recovery. The body of the robot is a heavy flattened box (base dimensions: 1.07 m X 1.10 m X .393 m, dry weight: ~127 kg, displacement: ~ 45 kg) with a low center of gravity for stability and robust construction to withstand waves and currents. It is topped by a

  16. Photochemical Control of Organic Carbon Availability to Coastal Microbial Communities

    NASA Astrophysics Data System (ADS)

    Miller, W. L.; Reader, H. E.; Powers, L. C.

    2010-12-01

    Chromophoric dissolved organic matter (CDOM) is the fraction of dissolved organic matter that absorbs solar radiation. In terrestrially influenced locations high concentrations of CDOM help to shield the biological community from harmful UV radiation. Although CDOM is largely biologically refractory in nature, photochemistry has the potential to transform biologically refractory carbon into more biolabile forms. Studies suggest that in marine systems, the effect of UVR on carbon availability and subsequent bacterial production varies widely, ranging from a +200% increase to a -75% decrease (Mopper and Kieber, 2002). Evidence suggests that the largely negative or “no-effect” samples are from oligotrophic waters and that terrestrially influenced samples experience a more positive effect on the biolability of carbon after irradiation. To quantify the effects of photochemistry on the biolability of DOC in a terrestrially influenced system, a quarterly sampling effort was undertaken at three estuarine locations off the coast of Georgia, USA for a total of 14 apparent quantum yield (AQY) determinations. Large expanses of salt marsh on the coast of Georgia, create a large non-point source of DOC to the coastal ocean. Sapelo Sound, the northernmost sampling site, is dominated by offshore waters and receives little to no freshwater input throughout the year. Altamaha Sound, the southernmost sampling site, is strongly influenced by the Altamaha River, which drains the largest watershed in the state of Georgia. Doboy Sound, situated between these two sites, is largely marine dominated but is influenced by fresh water during periods of high river flow. Each sample was 0.2um filter-sterilized before irradiation in a Suntest Solar Simulator; using optical filters to create 7 distinct radiance spectra in 15 samples for determination of AQY spectra for release of biolabile DOC. Irradiated samples were consequently inoculated with the natural microbial community concentrated

  17. Suspended marine particulate proteins in coastal and oligotrophic waters

    NASA Astrophysics Data System (ADS)

    Bridoux, Maxime C.; Neibauer, Jaqui; Ingalls, Anitra E.; Nunn, Brook L.; Keil, Richard G.

    2015-03-01

    Metaproteomic analyses were performed on suspended sediments collected in one coastal environment (Washington margin, Pacific Ocean, n = 5) and two oligotrophic environments (Atlantic Ocean near BATS, n = 5, and Pacific Ocean near HOTS, n = 5). Using a database of 2.3 million marine proteins developed using the NCBI database, 443 unique peptides were detected from which 363 unique proteins were identified. Samples from the euphotic zone contained on average 2-3x more identifiable proteins than deeper waters (150-1500 m) and these proteins were predominately from photosynthetic organisms. Diatom peptides dominate the spectra of the Washington margin while peptides from cyanobacteria, such as Synechococcus sp. dominated the spectra of both oligotrophic sites. Despite differences in the exact proteins identified at each location, there is good agreement for protein function and cellular location. Proteins in surface waters code for a variety of cellular functions including photosynthesis (24% of detected proteins), energy production (10%), membrane production (9%) and genetic coding and reading (9%), and are split 60-40 between membrane proteins and intracellular cytoplasmic proteins. Sargasso Sea surface waters contain a suite of peptides consistent with proteins involved in circadian rhythms that promote both C and N fixation at night. At depth in the Sargasso Sea, both muscle-derived myosin protein and the muscle-hydrolyzing proteases deseasin MCP-01 and metalloprotease Mcp02 from γ-proteobacteria were observed. Deeper waters contain peptides predominately sourced from γ-proteobacteria (37% of detected proteins) and α-proteobacteria (26%), although peptides from membrane and photosynthetic proteins attributable to phytoplankton were still observed (13%). Relative to surface values, detection frequencies for bacterial membrane proteins and extracellular enzymes rose from 9 to 16 and 2 to 4% respectively below the thermocline and the overall balance between

  18. Marine fish communities in shallow volcanic habitats.

    PubMed

    Pinault, M; Loiseau, N; Chabanet, P; Durville, P; Magalon, H; Quod, J P; Galzin, R

    2013-06-01

    This survey of the marine ichthyofauna of the Piton de La Fournaise volcano at Reunion Island is the first explanatory study of fish community structures in this area. It describes and analyses the main qualitative descriptors of the fish communities (i.e. species richness, diet, life history and geographical distribution) and their spatio-temporal organization. This investigation in 2011 examined lava flows of different ages, including the most recent flows that entered the ocean between 1977 and 2007. In all, 263 species belonging to 45 families were observed. Overall, the fish community was notable for an absence of top predators and a predominance of opportunistic small-bodied species, with dietary flexibility and high reproductive rates, characteristic of the early stages of ecological succession. Between-site analysis indicated that the fish assemblages differed essentially according to the intensity of the last volcanic disturbances. Fish communities in the most disturbed sites showed the highest numbers of Serranidae and the highest proportions of omnivores and small-bodied opportunistic carnivores, including a high proportion of endemic south-western Indian Ocean species. The spatial pattern of this last category of species could be the result of convergent biological traits, and their adaptation to unstable environments at the expense of their competitiveness in more biodiverse, mature communities. Conversely, fish communities in the less disturbed sites showed the highest number of Holocentridae and the highest proportion of browsers of sessile invertebrates. This last characteristic could be a consequence of higher ecological maturity, illustrated by a more specialized trophic network, for assemblages in areas with less intense disturbances. Otherwise, high structural complexity, either in unconsolidated lava boulders, rocks and rubble or high coral-covered sites, could favour the increase of the total number of species independent of disturbance

  19. Engaging a community towards marine cyberinfrastructure: Lessons Learned from The Marine Metadata Interoperability initiative

    NASA Astrophysics Data System (ADS)

    Galbraith, N. R.; Graybeal, J.; Bermudez, L. E.; Wright, D.

    2005-12-01

    The Marine Metadata Interoperability (MMI) initiative promotes the exchange, integration and use of marine data through enhanced data publishing, discovery, documentation and accessibility. The project, operating since late 2004, presents several cultural organizational challenges because of the diversity of participants: scientists, technical experts, and data managers from around the world, all working in organizations with different corporate cultures, funding structures, and systems of decision-making. MMI provides educational resources at several levels. For instance, short introductions to metadata concepts are available, as well as guides and "cookbooks" for the quick and efficient preparation of marine metadata. For those who are building major marine data systems, including ocean-observing capabilities, there are training materials, marine metadata content examples, and resources for mapping elements between different metadata standards. The MMI also provides examples of good metadata practices in existing data systems, including the EU's Marine XML project, and functioning ocean/coastal clearinghouses and atlases developed by MMI team members. Communication tools that help build community: 1) Website, used to introduce the initiative to new visitors, and to provide in-depth guidance and resources to members and visitors. The site is built using Plone, an open source web content management system. Plone allows the site to serve as a wiki, to which every user can contribute material. This keeps the membership engaged and spreads the responsibility for the tasks of updating and expanding the site. 2) Email-lists, to engage the broad ocean sciences community. The discussion forums "news," "ask," and "site-help" are available for receiving regular updates on MMI activities, seeking advice or support on projects and standards, or for assistance with using the MMI site. Internal email lists are provided for the Technical Team, the Steering Committee and

  20. European Community`s program in marine resources development

    SciTech Connect

    Lenoble, J.P.; Jarmache, E.

    1995-12-01

    The European Community launched already several research program in the different fields of social and industrial activities. The Fourth Framework Programme is divided into 4 main activities comporting a total of 18 programs. These programs are dealing with general topics as information and communication, industrial technologies, environment, life sciences and technologies, energy, transport and socioeconomic research. One line is devoted to marine sciences and technology, but offshore activities could also be included in the other topics as offshore oil and gas in energy, ship building and harbor in transport, aquaculture and fisheries in life sciences and technology, etc. In order to maintain a coherent approach toward offshore activities, the European maritime industries met intensively front 1991 to 1994 and recommended a series of proposal for Research and Development of marine resources. The methodology and content of these proposals is exposed.

  1. [Concentration and community diversity of microbes in bioaerosols in the Qingdao coastal region].

    PubMed

    Qi, Jian-Hua; Wu, Li-Jing; Gao, Dong-Mei; Jin, Chuan

    2014-03-01

    Bioaerosol samples were collected in Qingdao coastal region during July 2009 - June 2010 to investigate the concentration and community diversity of microbes in bioaerosols. Microbe concentrations (bacteria and fungi) in marine and terrestrial bioaerosols were determined and diversity indices including Shannon-Weiner index, Simpson's index and Pielou index were calculated in this study. Monthly average concentrations of terrestrial bacteria, marine bacteria, terrestrial fungi and marine fungi were in the ranges of 12-436 CFU x m(-3), 25-561 CFU x m(-3), 0-817 CFU x m(-3) and 11-1346 CFU x m(-3), respectively. There were consistent seasonal variations of these four types of microbe, with higher concentrations in spring and summer and lowest during winter, especially in February. Compared to terrestrial microbes, marine microbes account for higher proportion to the total culturable microbes, with a percentage of 63%. The number of microbial species varied from 17 to 102, and was partially correlated with microbial concentrations, however, it did not show obvious seasonal variation. Based on the analysis of calculated diversity indices, we found that the community diversities of four types of microbe were much higher in January, November and May than in February. The community diversity varied with the season, space and different microbial species, and showed a different seasonal variation from the microbial concentration.

  2. Phytoplankton community composition in nearshore coastal waters of Louisiana

    EPA Science Inventory

    Phytoplankton community compositions within near-shore coastal and estuarine waters of Louisiana were characterized by relative abundance, biovolume, and taxonomic identification to genus and species when possible. The range of total nitrogen was 0.5 to 1.3 mg L-1 and total phos...

  3. Marine debris ingestion by coastal dolphins: what drives differences between sympatric species?

    PubMed

    Di Beneditto, Ana Paula Madeira; Ramos, Renata Maria Arruda

    2014-06-15

    This study compared marine debris ingestion of the coastal dolphins Pontoporia blainvillei and Sotalia guianensis in a sympatric area in Atlantic Ocean. Among the 89 stomach contents samples of P. blainvillei, 14 (15.7%) contained marine debris. For S. guianensis, 77 stomach contents samples were analyzed and only one of which (1.30%) contained marine debris. The debris recovered was plastic material: nylon yarns and flexible plastics. Differences in feeding habits between the coastal dolphins were found to drive their differences regarding marine debris ingestion. The feeding activity of P. blainvillei is mainly near the sea bottom, which increases its chances of ingesting debris deposited on the seabed. In contrast, S. guianensis has a near-surface feeding habit. In the study area, the seabed is the main zone of accumulation of debris, and species with some degree of association with the sea bottom may be local bioindicators of marine debris pollution.

  4. Coupling Bacterioplankton Populations and Environment to Community Function in Coastal Temperate Waters

    PubMed Central

    Traving, Sachia J.; Bentzon-Tilia, Mikkel; Knudsen-Leerbeck, Helle; Mantikci, Mustafa; Hansen, Jørgen L. S.; Stedmon, Colin A.; Sørensen, Helle; Markager, Stiig; Riemann, Lasse

    2016-01-01

    Bacterioplankton play a key role in marine waters facilitating processes important for carbon cycling. However, the influence of specific bacterial populations and environmental conditions on bacterioplankton community performance remains unclear. The aim of the present study was to identify drivers of bacterioplankton community functions, taking into account the variability in community composition and environmental conditions over seasons, in two contrasting coastal systems. A Least Absolute Shrinkage and Selection Operator (LASSO) analysis of the biological and chemical data obtained from surface waters over a full year indicated that specific bacterial populations were linked to measured functions. Namely, Synechococcus (Cyanobacteria) was strongly correlated with protease activity. Both function and community composition showed seasonal variation. However, the pattern of substrate utilization capacity could not be directly linked to the community dynamics. The overall importance of dissolved organic matter (DOM) parameters in the LASSO models indicate that bacterioplankton respond to the present substrate landscape, with a particular importance of nitrogenous DOM. The identification of common drivers of bacterioplankton community functions in two different systems indicates that the drivers may be of broader relevance in coastal temperate waters. PMID:27729909

  5. Impact of atmospheric deposition on the metabolism of coastal microbial communities

    NASA Astrophysics Data System (ADS)

    Martínez-García, Sandra; Arbones, B.; García-Martín, E. E.; Teixeira, I. G.; Serret, P.; Fernández, E.; Figueiras, F. G.; Teira, E.; Álvarez-Salgado, X. A.

    2015-02-01

    The impact of rain water collected at marine, urban and rural sites on coastal phytoplankton biomass, primary production and community composition as well as the effect on microbial plankton metabolism was studied in 3 microcosm experiments conducted under contrasting spring, autumn and winter conditions. The measured responses were highly variable. Rainwater additions increased chlorophyll a (Chl a) concentration (5-68% difference between rainwater treatments relative to the control) in all experiments and reduced or stimulated primary production (PP) depending on the treatment and the experiment (from -10 to +169% relative to the control). Autotrophic stimulation was highest in spring, probably related to the low initial natural nutrient concentrations. Under winter nutrient replete conditions, rainwater inputs changed the phytoplankton community although this change did not promote increases in primary production. Enhancement of net autotrophy (increase of net oxygen production up to 227%) after rainwater inputs were only found during the period of low nutrient availability. Inputs of dissolved organic nitrogen (DON) explained a large fraction of the variability in the response of PP, Chl a, community respiration (CR) and net community production (NCP). Our results suggest that differences in the initial environmental conditions (i.e. nutrient availability), rainwater composition and the ability of the present autotrophic communities to utilize the new nutrients result in substantial changes in the microbial responses and associated biologically-mediated carbon fluxes. As atmospheric nutrient inputs into coastal oceans are increasing rapidly, our results help to understand the effects of different inputs on the metabolism of distinct microbial communities.

  6. Coastal oceanography sets the pace of rocky intertidal community dynamics.

    PubMed

    Menge, B A; Lubchenco, J; Bracken, M E S; Chan, F; Foley, M M; Freidenburg, T L; Gaines, S D; Hudson, G; Krenz, C; Leslie, H; Menge, D N L; Russell, R; Webster, M S

    2003-10-14

    The structure of ecological communities reflects a tension among forces that alter populations. Marine ecologists previously emphasized control by locally operating forces (predation, competition, and disturbance), but newer studies suggest that inputs from large-scale oceanographically modulated subsidies (nutrients, particulates, and propagules) can strongly influence community structure and dynamics. On New Zealand rocky shores, the magnitude of such subsidies differs profoundly between contrasting oceanographic regimes. Community structure, and particularly the pace of community dynamics, differ dramatically between intermittent upwelling regimes compared with relatively persistent down-welling regimes. We suggest that subsidy rates are a key determinant of the intensity of species interactions, and thus of structure in marine systems, and perhaps also nonmarine communities.

  7. Teacher's Activity Guide to Coastal Awareness. Marine Bulletin No. 23.

    ERIC Educational Resources Information Center

    Callaghan, Sara S.

    This teacher's guide was prepared for use with "Down Where the Water Is: A Coastal Awareness Activity Book," as part of the Rhode Island Coastal Resources Management Council's public education program. Contained are instructions on the use of the Activity Book, page-by-page, with glossaries, activity ideas, resources, places to visit, and notes…

  8. Two science communities and coastal wetlands policy

    SciTech Connect

    LeVine, J.B.

    1984-01-01

    This study compares the attitudes of academic and government wetlands scientists about wetlands science and policy. Analysis of one thousand seven hundred responses to Delphi-type questions posed to twenty California scientists on a wide range of issues about California coastal wetlands found significant differences between academic and government scientists about wetlands definitions, threats to wetlands, wetlands policies, wetlands health, and wetlands mitigation strategies. These differences were consistent with descriptive models of political sociology developed by D. Price and C.P. Snow and with normative models of the philosophy of science developed in the renaissance by F. Bacon and R. Descartes. Characteristics, preferences, and personality attributes consistent with group functions and roles have been described in these models. These findings have serious implications for policy. When academic and government wetlands scientists act as advisors to the major parties in land use conflicts, basic differences in perspective have contributed to costly contention over the future use of wetlands.

  9. Regulatory Assistance, Stakeholder Outreach, and Coastal and Marine Spatial Planning Activities in Support of Marine and Hydrokinetic Energy Deployment

    SciTech Connect

    Geerlofs, Simon H.; Copping, Andrea E.; Van Cleve, Frances B.; Blake, Kara M.; Hanna, Luke A.

    2011-09-30

    This fiscal year 2011 progress report summarizes activities carried out under DOE Water Power Task 2.1.7, Permitting and Planning. Activities under Task 2.1.7 address the concerns of a wide range of stakeholders with an interest in the development of the marine and hydrokinetic (MHK) energy industry, including regulatory and resource management agencies, tribes, nongovernmental organizations, and industry. Objectives for Task 2.1.7 are the following: • to work with stakeholders to streamline the MHK regulatory permitting process • to work with stakeholders to gather information on needs and priorities for environmental assessment of MHK development • to communicate research findings and directions to the MHK industry and stakeholders • to engage in spatial planning processes in order to further the development of the MHK industry. These objectives are met through three subtasks, each of which is described in this report: • 2.1.7.1—Regulatory Assistance • 2.1.7.2—Stakeholder Outreach • 2.1.7.3—Coastal and Marine Spatial Planning. As MHK industry partners work with the regulatory community and stakeholders to plan, site, permit, and license MHK technologies, they have an interest in a predictable, efficient, and transparent process. Stakeholders and regulators have an interest in processes that result in sustainable use of ocean space with minimal effects to existing ocean users. Both stakeholders and regulators have an interest in avoiding legal challenges by meeting the intent of federal, state, and local laws that govern siting and operation of MHK technologies. The intention of work under Task 2.1.7 is to understand and work to address these varied interests, reduce conflict, identify efficiencies, and ultimately reduce the regulatory costs, time, and potential environmental impacts associated with developing, siting, permitting, and deploying MHK systems.

  10. Diagenesis of conifer needles in a coastal marine environment

    NASA Astrophysics Data System (ADS)

    Hedges, John I.; Weliky, K.

    1989-10-01

    Physically intact fir, hemlock and cedar needles were isolated from different horizons of a sediment core from a coastal marine bay (Dabob Bay, Washington State, U.S.A.) and from nearby trees and forest litter. Green fir, hemlock and cedar needles were all characterized by glucose-rich aldose mixtures (~30% of tissue carbon), the production of vanillyl and cinnamyl CuO-derived phenols (~8% of tissue carbon) and the presence of both pinitol and myo-inositol (1-2% of tissue carbon). Needles from forest litter were enriched in lignin phenols and non-glucose aldoses and depleted in glucose and cyclitols. The sediment core contained an average of 10 mg/1 of physically intact fir, hemlock and cedar needles, which occurred in similar relative abundances and accounted for less than 1% of the total nonwoody gymnosperm tissue. Compared to the green and litter counterparts, all sedimentary needles were greatly depleted in cyclitols, glucose and p-coumaric acid and enriched in vanillyl phenol precursors. The degree of elevation of vanillyl phenol yield from the degraded needles was used to estimate minimal carbon losses from the samples, which ranged from near 40% for needle litter to almost 70% for the deepest (~100 years old) sedimentary fir/hemlock samples. Although downcore increases in carbon loss and refractory organic components indicated in situ diagenesis, the bulk of overall degradation occurred either on land or during the first 10-20 years after deposition. Atomic C/N ratios of degraded needles were lower than for green counterparts, but nitrogen was lost overall. These relative changes indicate the following stability series: vanillyl phenols > N > ferulic acid, p-hydroxy phenols, most aldoses and bulk tissue > glucose and p-coumaric acid > cyclitols (near 100% loss). Vanillic acid to vanillin ratios, (Ad/Al)v, of the green fir and hemlock needles were unusually high (0.36-0.38) and decreased downcore. Diagenesis also decreased the cinnamyl/vanillyl phenol ratio

  11. Phylogenetic analysis of the bacterial communities in marine sediments.

    PubMed Central

    Gray, J P; Herwig, R P

    1996-01-01

    For the phylogenetic analysis of microbial communities present in environmental samples microbial DNA can be extracted from the sample, 16S rDNA can be amplified with suitable primers and the PCR, and clonal libraries can be constructed. We report a protocol that can be used for efficient cell lysis and recovery of DNA from marine sediments. Key steps in this procedure include the use of a bead mill homogenizer for matrix disruption and uniform cell lysis and then purification of the released DNA by agarose gel electrophoresis. For sediments collected from two sites in Puget Sound, over 96% of the cells present were lysed. Our method yields high-molecular-weight DNA that is suitable for molecular studies, including amplification of 16S rRNA genes. The DNA yield was 47 micrograms per g (dry weight) for sediments collected from creosote-contaminated Eagle Harbor, Wash. Primers were selected for the PCR amplification of (eu)bacterial 16S rDNA that contained linkers with unique 8-base restriction sites for directional cloning. Examination of 22 16S rDNA clones showed that the surficial sediments in Eagle Harbor contained a phylogenetically diverse population of organisms from the Bacteria domain (G. J. Olsen, C. R. Woese, and R. Overbeek, J. Bacteriol. 176:1-6, 1994) with members of six major lineages represented: alpha, delta, and gamma Proteobacteria; the gram-positive high G+C content subdivision; clostridia and related organisms; and planctomyces and related organisms. None of the clones were identical to any representatives in the Ribosomal Database Project small subunit RNA database. The analysis of clonal representives in the first report using molecular techniques to determine the phylogenetic composition of the (eu)bacterial community present in coastal marine sediments. PMID:8899989

  12. A Guidebook to Help Coastal Sumatran Communities Prepare for Tsunamis

    NASA Astrophysics Data System (ADS)

    Samant, L.; Tobin, L. T.; Tucker, B. E.

    2007-12-01

    One way to save lives in future tsunamis in coastal Sumatran communities - where more than one million people live and where tsunamis can strike less than one half hour after the triggering earthquake - is to help these communities prepare themselves. To this end, GeoHazards International (GHI) has developed, with a team of advisors from the fields of earth science, civil engineering, emergency response management and social science, a tsunami preparedness guidebook that summarizes state-of-the-art research and worldwide experience in community tsunami preparedness. This guidebook (available at no cost on www.geohaz.org) introduces essential information about tsunamis, tsunami risk mapping, evacuation planning, community education, tsunami warning systems, and the reduction of damage that tsunamis can cause. It describes how to plan and conduct effective tsunami safety programs. Particular emphasis is placed on methods to evacuate quickly and safely all areas that could be flooded. Each section of the guidebook points to sources that provide supplementary, detailed information that may be important to particular communities. The guidebook is aimed at any person - a concerned citizen, government official, business leader, or member of a community organization - who is willing to become an advocate for local tsunami safety. Scientific expertise is not needed. GHI now seeks assistance in distributing this guidebook and in working with grassroots and international organizations to help Sumatran coastal communities use it to prepare for the next tsunami.

  13. The role of infectious disease in marine communities: chapter 5

    USGS Publications Warehouse

    Lafferty, Kevin D.; Harvell, C. Drew

    2014-01-01

    Marine ecologists recognize that infectious diseases play and important role in ocean ecosystems. This role may have increased in some host taxa over time (Ward and Lafferty 2004). We begin this chapter by introducing infectious agents and their relationships with their hosts in marine systems. We then put infectious disease agents with their hosts in marine systems. We then put infectious disease agents in the perspective of marine biodiversity and discuss the various factors that affect parasites. Specifically, we introduce some basin epidemiological concepts, including the effects of stress and free-living diversity on parasites. Following this, we give brief consideration to communities of parasites within their hosts, particularly as these can lead to general insights into community ecology. We also give examples of how infectious diseases affect host populations, scaling up to marine communities. Finally, we present examples of marine infectious disease that impair conservation and fisheries.

  14. Studies of the DOM aqueous extracts from coastal marine sediments

    NASA Astrophysics Data System (ADS)

    Sakellariadou, F.

    2012-04-01

    Dissolved organic matter (DOM) represents a major exchangeable organic pool playing an outstanding role in the ocean carbon cycle. It has a complex chemical structure made up of a wide range of organic molecules. The composition of DOM depends on the sources proximity and the exposure to any sort of degradation mechanism. The coloured (or chromophoric) dissolved organic matter (CDOM), representing the optically active fraction of DOM, consists of aromatic rings able to absorb light in the visible and UV regions (Kirk, 1994) and fluorophoric molecules that emit light. The main fluorophoric moieties of CDOM are humic material with a blue fluorescence and protein material with an ultraviolet (UV) fluorescence (Mopper and Schultz, 1993). Dissolved organic matter interacts with pollutants either by enhancing their bioavailability or by influencing their transportation to the soluble phase. In addition, DOM affects the remineralisation of carbon and its preservation in marine sediments. Referring to its origin, it can be terrestrial, freshwater or marine one. Fluorescence spectroscopy is a technique widely applied for the identification and characterization of organic matter, being fast, simple, non-destructive and sensitive. In addition, the fluorescence analysis for the physico-chemical characterization of organic matter requires a small amount of aqueous sample at a low concentration, in comparison with the large sample volumes needed for conventional techniques. At the present study coastal sediment samples were collected from Messiniakos gulf in the south western Peloponnese in South Greece. Messiniakos gulf has a seabed dominated by very abrupt inclinations reaching depths of more than 1000m. All samples, according to their grain size, are classified as fine clayey silt. Dissolved organic matter was extracted under gentle extraction conditions (4 mM CaCl2 solution). The various classes of organic components present at the DOM aqueous extracts were characterised by

  15. Coastal Resilience: Using interactive decision support to address the needs of natural and human communities in Long Island Sound, USA

    NASA Astrophysics Data System (ADS)

    Gilmer, B.; Whelchel, A.; Newkirk, S.; Beck, M.; Shepard, C.; Ferdana, Z.

    2010-12-01

    Coastal Resilience (www.coastalresilience.org) is an ecosystem-based, coastal and marine spatial planning framework and web mapping application that illustrates ecological, socioeconomic, and coastal hazards information in Long Island Sound (New York and Connecticut), USA. Much of Long Island Sound’s private property is only inches above sea level, placing millions of dollars in public and private funds at risk to rising sea levels and other coastal hazards. These impacts also threaten wetlands and other coastal ecosystems that provide habitat, natural buffers to storms, and other ecosystem services. Despite a growing awareness of global climate change, local decision makers still lack the tools to examine different management objectives as sea levels rise and coastal hazards increase. The Coastal Resilience project provides tools and information to better inform decision-making with a primary goal of identifying vulnerable human and natural communities, while illustrating the important role that ecosystems will play in the face of sea level rise and increased storm intensity. This study focuses on The Nature Conservancy’s use of innovative spatial analysis techniques and community engagement to identify and plan for the protection of vulnerable coastal communities and ecosystems, natural resource migration, and economic risk. This work is intended to help identify ecosystem based adaptation solutions in the face of global climate change. The Nature Conservancy, working with multiple partners such as the NASA Goddard Institute for Space Studies and NOAA’s Coastal Services Center, deliver this information via the internet to help local decision makers keep the environment and public safety in mind.

  16. Variability in bacterial community structure during upwelling in the coastal ocean

    USGS Publications Warehouse

    Kerkhof, L.J.; Voytek, M.A.; Sherrell, Robert M.; Millie, D.; Schofield, O.

    1999-01-01

    Over the last 30 years, investigations at the community level of marine bacteria and phytoplankton populations suggest they are tightly coupled. However, traditional oceanographic approaches cannot assess whether associations between specific bacteria and phytoplankton exist. Recently, molecular based approaches have been implemented to characterize specific members of different marine bacterial communities. Yet, few molecular-based studies have examined coastal upwelling situations. This is important since upwelling systems provide a unique opportunity for analyzing the association between specific bacteria and specific phytoplankton in the ocean. It is widely believed that upwelling can lead to changes in phytoplankton populations (blooms). Thus, if specific associations exist, we would expect to observe changes in the bacterial population triggered by the bloom. In this paper, we present preliminary data from coastal waters off New Jersey that confirm a shift in bacterial communities during a 1995 upwelling event recorded at a long-term earth observatory (LEO-15) in the Mid-Atlantic Bight. Using PCR amplification and cloning, specific bacterial 16S ribosomal RNA sequences were found which were present in upwelling samples during a phytoplankton bloom, but were not detected in non-bloom samples (surface seawater, offshore sites or sediment samples) collected at the same time or in the same area. These findings are consistent with the notion of specific associations between bacteria and phytoplankton in the ocean. However, further examination of episodic events, such as coastal upwelling, are needed to confirm the existence of specific associations. Additionally, experiments need to be performed to elucidate the mechanisms leading to the specific linkages between a group of bacteria and a group of phytoplankton.

  17. Building Community Based Initiatives in Rural Coastal Communities. Staff Paper 95.2.

    ERIC Educational Resources Information Center

    Behr, Chris; Lamb, Greg; Miller, Al; Sadowske, Sue; Shaffer, Ron

    In rural coastal communities, trade-offs between conserving and developing environmentally sensitive resources are acute. At the community level, part-time volunteers and citizen officials are asked to make complex decisions based on ambiguous and frequently contradictory "scientific" evidence of economic and environmental relationships. The…

  18. A multivariate approach to the determination of an indicator species pool for community-based bioassessment of marine water quality.

    PubMed

    Xu, Guangjian; Zhong, Xiaoxiao; Wang, Yangfan; Warren, Alan; Xu, Henglong

    2014-10-15

    Previous studies in Chinese coastal waters of the Yellow Sea have shown that periphytic ciliates are reliable indicators of marine water quality. However, traditional community-based bioassessments are time-consuming because they rely on the identification and enumeration of all species within the community. In order to improve bioassessment efficiency, step-best-matching analysis was used to identify which are the most reliable indicator species among periphytic marine ciliate communities. Based on indices of species richness, diversity and evenness, a subset of 48 species (out of a total of 141) was found to retain sufficient information for accurately predicting water quality, and was more strongly related to changes of environmental variables than the full species set. These results demonstrate that the step-best-matching analysis is a powerful approach for identifying an indicator species pool from a full species dataset of a community, and allows the development of time-efficient sampling protocols for community-based marine bioassessment.

  19. Assessing the effect of marine reserves on household food security in Kenyan coral reef fishing communities.

    PubMed

    Darling, Emily S

    2014-01-01

    Measuring the success or failure of natural resource management is a key challenge to evaluate the impact of conservation for ecological, economic and social outcomes. Marine reserves are a popular tool for managing coastal ecosystems and resources yet surprisingly few studies have quantified the social-economic impacts of marine reserves on food security despite the critical importance of this outcome for fisheries management in developing countries. Here, I conducted semi-structured household surveys with 113 women heads-of-households to investigate the influence of two old, well-enforced, no-take marine reserves on food security in four coastal fishing communities in Kenya, East Africa. Multi-model information-theoretic inference and matching methods found that marine reserves did not influence household food security, as measured by protein consumption, diet diversity and food coping strategies. Instead, food security was strongly influenced by fishing livelihoods and household wealth: fishing families and wealthier households were more food secure than non-fishing and poorer households. These findings highlight the importance of complex social and economic landscapes of livelihoods, urbanization, power and gender dynamics that can drive the outcomes of marine conservation and management.

  20. Assessing the Effect of Marine Reserves on Household Food Security in Kenyan Coral Reef Fishing Communities

    PubMed Central

    Darling, Emily S.

    2014-01-01

    Measuring the success or failure of natural resource management is a key challenge to evaluate the impact of conservation for ecological, economic and social outcomes. Marine reserves are a popular tool for managing coastal ecosystems and resources yet surprisingly few studies have quantified the social-economic impacts of marine reserves on food security despite the critical importance of this outcome for fisheries management in developing countries. Here, I conducted semi-structured household surveys with 113 women heads-of-households to investigate the influence of two old, well-enforced, no-take marine reserves on food security in four coastal fishing communities in Kenya, East Africa. Multi-model information-theoretic inference and matching methods found that marine reserves did not influence household food security, as measured by protein consumption, diet diversity and food coping strategies. Instead, food security was strongly influenced by fishing livelihoods and household wealth: fishing families and wealthier households were more food secure than non-fishing and poorer households. These findings highlight the importance of complex social and economic landscapes of livelihoods, urbanization, power and gender dynamics that can drive the outcomes of marine conservation and management. PMID:25422888

  1. Decoding size distribution patterns in marine and transitional water phytoplankton: from community to species level.

    PubMed

    Roselli, Leonilde; Basset, Alberto

    2015-01-01

    Understanding the mechanisms of phytoplankton community assembly is a fundamental issue of aquatic ecology. Here, we use field data from transitional (e.g. coastal lagoons) and coastal water environments to decode patterns of phytoplankton size distribution into organization and adaptive mechanisms. Transitional waters are characterized by higher resource availability and shallower well-mixed water column than coastal marine environments. Differences in physico-chemical regime between the two environments have been hypothesized to exert contrasting selective pressures on phytoplankton cell morphology (size and shape). We tested the hypothesis focusing on resource availability (nutrients and light) and mixed layer depth as ecological axes that define ecological niches of phytoplankton. We report fundamental differences in size distributions of marine and freshwater diatoms, with transitional water phytoplankton significantly smaller and with higher surface to volume ratio than marine species. Here, we hypothesize that mixing condition affecting size-dependent sinking may drive phytoplankton size and shape distributions. The interplay between shallow mixed layer depth and frequent and complete mixing of transitional waters may likely increase the competitive advantage of small phytoplankton limiting large cell fitness. The nutrient regime appears to explain the size distribution within both marine and transitional water environments, while it seem does not explain the pattern observed across the two environments. In addition, difference in light availability across the two environments appear do not explain the occurrence of asymmetric size distribution at each hierarchical level. We hypothesize that such competitive equilibria and adaptive strategies in resource exploitation may drive by organism's behavior which exploring patch resources in transitional and marine phytoplankton communities. PMID:25974052

  2. Decoding Size Distribution Patterns in Marine and Transitional Water Phytoplankton: From Community to Species Level

    PubMed Central

    Roselli, Leonilde; Basset, Alberto

    2015-01-01

    Understanding the mechanisms of phytoplankton community assembly is a fundamental issue of aquatic ecology. Here, we use field data from transitional (e.g. coastal lagoons) and coastal water environments to decode patterns of phytoplankton size distribution into organization and adaptive mechanisms. Transitional waters are characterized by higher resource availability and shallower well-mixed water column than coastal marine environments. Differences in physico-chemical regime between the two environments have been hypothesized to exert contrasting selective pressures on phytoplankton cell morphology (size and shape). We tested the hypothesis focusing on resource availability (nutrients and light) and mixed layer depth as ecological axes that define ecological niches of phytoplankton. We report fundamental differences in size distributions of marine and freshwater diatoms, with transitional water phytoplankton significantly smaller and with higher surface to volume ratio than marine species. Here, we hypothesize that mixing condition affecting size-dependent sinking may drive phytoplankton size and shape distributions. The interplay between shallow mixed layer depth and frequent and complete mixing of transitional waters may likely increase the competitive advantage of small phytoplankton limiting large cell fitness. The nutrient regime appears to explain the size distribution within both marine and transitional water environments, while it seem does not explain the pattern observed across the two environments. In addition, difference in light availability across the two environments appear do not explain the occurrence of asymmetric size distribution at each hierarchical level. We hypothesize that such competitive equilibria and adaptive strategies in resource exploitation may drive by organism’s behavior which exploring patch resources in transitional and marine phytoplankton communities. PMID:25974052

  3. [Identification of marine and coastal biodiversity conservation priorities in Costa Rica].

    PubMed

    Alvarado, Juan José; Herrera, Bernal; Corrales, Lenin; Asch, Jenny; Paaby, Pía

    2011-06-01

    Costa Rica is recognized as one of the most diverse countries in species and ecosystems, in their terrestrial realm as well as in the marine. Besides this relevance, the country presents a delay on conservation and management of marine and coastal biodiversity, with respect to terrestrial. For 2006, the marine protected surface was 5,208.8 km2, with 331.5 km of coastline, in 20 protected areas. The country has made progress on the conservation priority sites identification for terrestrial and freshwater biodiversity, with few efforts on marine planning. This research presents the analysis and results of the gap identification process, for marine and coastal biodiversity conservation in the protected areas system of Costa Rica. The analysis was built with the spatial information available on the presence and distribution of coastal and marine biodiversity, the establishment of the conservation goals and a threat analysis over the ecological integrity of this biodiversity. The selection of high-priority sites was carried out using spatial optimization techniques and the superposition over the current shape of marine protected areas, in order to identify representation gaps. A total of 19,076 km2 of conservation gaps were indentified, with 1,323 km2 in the Caribbean and 17,753 km2 in the Pacific. Recommendations are aimed at planning and strengthening the marine protected areas system, using the gaps identified as a framework. It is expected that the results of this study would be the scientific base needed for planning and sustainable use of marine biodiversity in the country.

  4. Passive Sampling and High Resolution Mass Spectrometry for Chemical Profiling of French Coastal Areas with a Focus on Marine Biotoxins.

    PubMed

    Zendong, Zita; Bertrand, Samuel; Herrenknecht, Christine; Abadie, Eric; Jauzein, Cécile; Lemée, Rodolphe; Gouriou, Jérémie; Amzil, Zouher; Hess, Philipp

    2016-08-16

    Passive samplers (solid phase adsorption toxin tracking: SPATT) are able to accumulate biotoxins produced by microalgae directly from seawater, thus providing useful information for monitoring of the marine environment. SPATTs containing 0.3, 3, and 10 g of resin were deployed at four different coastal areas in France and analyzed using liquid chromatography coupled to high resolution mass spectrometry. Quantitative targeted screening provided insights into toxin profiles and showed that toxin concentrations and profiles in SPATTs were dependent on the amount of resin used. Between the three amounts of resin tested, SPATTs containing 3 g of resin appeared to be the best compromise, which is consistent with the use of 3 g of resin in SPATTs by previous studies. MassHunter and Mass Profiler Professional softwares were used for data reprocessing and statistical analyses. A differential profiling approach was developed to investigate and compare the overall chemical diversity of dissolved substances in different coastal water bodies. Principal component analysis (PCA) allowed for spatial differentiation between areas. Similarly, SPATTs retrieved from the same location at early, medium, and late deployment periods were also differentiated by PCA, reflecting seasonal variations in chemical profiles and in the microalgal community. This study used an untargeted metabolomic approach for spatial and temporal differentiation of marine environmental chemical profiles using SPATTs, and we propose this approach as a step forward in the discovery of chemical markers of short- or long-term changes in the microbial community structure. PMID:27463836

  5. Multispectral change vector analysis for monitoring coastal marine environments

    SciTech Connect

    Michalek, J.L.; Wagner, T.W.; Luczkovich, J.J.; Stoffle, R.W. Michigan Environmental Research Inst., Ann Arbor )

    1993-03-01

    This paper investigates the utility of multispectral Landsat Thematic Mapper satellite data for documenting changes to a Caribbean coastal zone using the change vector analysis processing technique. The area of study was the coastal region near the village of Buen Hombre on the north coast of the Dominican Republic. The change vector analysis techniques uses any number of spectral bands from multidate satellite data to produce change images that yield information about both the magnitude and direction of differences in pixel values (which are proportional to radiance). The final products were created by appending color-coded change pixels onto a black-and-white base map. The advantages and limitations of the technique for coastal inventories are discussed. 9 refs.

  6. Cabled observatories: Connecting coastal communities to local ocean data

    NASA Astrophysics Data System (ADS)

    Pelz, M.; Hoeberechts, M.; Brown, J. C. K.; McLean, M. A.; Ewing, N.; Moran, K.

    2015-12-01

    Coastal communities are facing a wide range of rapid changes due to anthropogenic and natural environmental influences. Communities are under pressure to adapt to effects of climate change, including altered shorelines, changes in availability of seafood, and in northern regions, changes to the extent, formation and break-up of land-fast and sea-ice. Access to up-to-date scientific data and basic climate literacy are essential tools to enable community members to make informed decisions about their own coast. Ocean Networks Canada (ONC) operates the world-leading NEPTUNE and VENUS cabled ocean observatories off the west coast of British Columbia (BC). ONC also operates smaller, coastal community observatories which provide data for both scientific and educational initiatives.The first Arctic community observatory, deployed in 2012, is located in Cambridge Bay, Nunavut. Real-time data flowing from the platform are collected by a range of instruments, including a conductivity-temperature-depth sensor (CTD), hydrophone, video camera, and an ice profiler. There is also a meteorological station and time lapse camera on the dock. Five additional community observatories are being installed over the next year along the coast of BC. Indigenous communities, including the Inuit population in Cambridge Bay and First Nations on BC's north and central coast, are key partners and collaborators of this initiative.Benefits to communities from cabled observatory ocean monitoring can only be achieved if the data collected are relevant to community members and contribute to research priorities identified within the community. The data must be easily accessible and complement existing environmental monitoring initiatives. Community members must possess knowledge and tools to analyze and interpret the data for their purposes. For these reasons, community involvement is critical to the project, including the design of user interfaces for data access, development of educational programs

  7. Terrestrial Sediment Delivery to Coastal and Marine Environments: US Virgin Islands

    NASA Astrophysics Data System (ADS)

    Larson, R. A.; Brooks, G. R.; Devine, B.; Wallace, L. E.; Holmes, C. W.; Schwing, P. T.

    2007-05-01

    Understanding terrestrial sediment dynamics in high-relief, tropical island settings, such as St. Thomas and St. John, USVI, has become a critical issue, as sediments are a potential threat to the health of down-slope environments. The primary depositional sinks of terrestrial sediments are 1) coastal buffer zones such as salt ponds, which trap sediments and keep them from being input into the marine environment, and 2) near-shore marine environments (coral reefs, seagrasses, algal flats etc.), many of which are adversely affected by terrestrial sedimentation. Land use change by anthropogenic activities has been shown to alter terrestrial sediment dynamics and greatly increase sediment delivery and accumulation rates in coastal and marine environments. Sediment cores collected in salt ponds and the near-shore marine environment were used to determine the sedimentology (texture and composition) and geochronology (using 14C, and 210Pb) prior to anthropogenic activities to define the "natural signal", or "baseline", as well as recent deviations from the "natural signal", which may be attributed to anthropogenic activities. Salt pond and marine sediments in watersheds without anthropogenic activities exhibit no deviations from the "natural signal" in sedimentology or accumulation rate. Salt pond and marine sediments in watersheds with anthropogenic activities contain a deviation from the "natural signal" manifested as an increase in accumulation rate within the last 100 yrs (most likely within the last 25-50 yrs) ranging from 3 -10 times greater than the "natural" accumulation rate. Sedimentologically, salt ponds reflect no recent change, where as marine sediments do show a recent deviation in sedimentology. This marine deviation is represented by an increase in organic content, a decrease in grain size, and a decrease in carbonate content (marine-derived) compared to the "natural signal". This change reflects an increase in terrestrial (non- carbonate, finer

  8. Buried marine-cut terraces and submerged marine-built terraces: The Carchuna-Calahonda coastal area (southeast Iberian Peninsula)

    NASA Astrophysics Data System (ADS)

    Martinez-Martos, Manuel; Galindo-Zaldivar, Jesus; Lobo, Francisco José; Pedrera, Antonio; Ruano, Patricia; Lopez-Chicano, Manuel; Ortega-Sánchez, Miguel

    2016-07-01

    The Carchuna-Calahonda coastal area is located between the onshore Betic Cordillera and the Alboran Sea. Its onshore sector is formed by detrital sediments that cover a metamorphic basement mostly composed of marbles, contiguous to an offshore shelf setting. New onshore gravity data allow us to characterize the location of flat marine-cut terraces carved into the metamorphic bedrock, which are covered by detrital sediments. In addition, multibeam bathymetry data, 3.5 kHz and sparker reflection seismic profiles, reveal offshore flat features linked to marine terraces that are related with the onshore buried marine-cut terraces. Gravity data are newly used to detect marine-cut terraces covered by sediments, enhancing the integration of onshore and offshore data. The marine terraces are distinguished based on the relative sea-level trend (regressive versus transgressive) and on the dominant sedimentary regime (erosional versus depositional). These data help constrain the ages of the marine terraces younger than 150 ka, using available Late Quaternary sea-level curves. Although previous geodetic research suggests a rapid sinking of the Carchuna-Calahonda coast, the heights of the marine-cut terraces and depositional terraces are mainly driven by sea-level changes, not tectonics.

  9. The Marine Realms Information Bank family of digital libraries: access to free online information for coastal and marine science

    USGS Publications Warehouse

    Lightsom, Frances L.; Allwardt, Alan O.

    2007-01-01

    Searching the World Wide Web for reliable information about specific topics or locations can be frustrating: too many hits, too little relevance. A well-designed digital library, offering a carefully selected collection of online resources, is an attractive alternative to web search engines. The U.S. Geological Survey (USGS) provides three digital libraries for coastal and marine science to serve the needs of a diverse audience--scientists, public servants, educators, and the public.

  10. Application of space remote sensing technology to living marine resources in coastal zones

    NASA Technical Reports Server (NTRS)

    Tilton, E. L., III

    1978-01-01

    This paper describes a compilation of new Landsat satellite remote sensing techniques for treatment of Coastal Zone Living Marine Resource problems. The techniques have been developed over the past three to five years using optimized digital analysis procedures and evaluated in limited coastal areas of the United States. However, most of the techniques are directly applicable to other areas of the world, particularly in those areas where Landsat satellite data are available. Each technique presented herein has been documented and published separately as a NASA report within the last three years. The data required to substantiate the conclusion that 'significant new space remote sensing techniques are now available for the treatment of Coastal Zone Living Marine Resource problems' are contained within these reports and are referenced herein.

  11. North Carolina Marine Education Manual, Unit Three: Coastal Ecology.

    ERIC Educational Resources Information Center

    Mauldin, Lundie; Frankenberg, Dirk

    Two dozen activities on the ecology of coastal areas, with special emphasis on North Carolina's coastline, comprise this manual for junior high school science teachers. Provided are a table correlating these lessons with state curriculum guidelines, and a summary of the unit's goals and behavioral objectives. Among the topics included are coastal…

  12. Commentary: Radioactive Wastes and Damage to Marine Communities

    ERIC Educational Resources Information Center

    Wallace, Bruce

    1974-01-01

    Discusses the effects of radioactive wastes on marine communities, with particular reference to the fitness of populations and the need for field and laboratory studies to provide evidence of ecological change. (JR)

  13. Coral microbial communities, zooxanthellae and mucus along gradients of seawater depth and coastal pollution.

    PubMed

    Klaus, James S; Janse, Ingmar; Heikoop, Jeffrey M; Sanford, Robert A; Fouke, Bruce W

    2007-05-01

    The high incidence of coral disease in shallow coastal marine environments suggests seawater depth and coastal pollution have an impact on the microbial communities inhabiting healthy coral tissues. A study was undertaken to determine how bacterial communities inhabiting tissues of the coral Montastraea annularis change at 5 m, 10 m and 20 m water depth in varying proximity to the urban centre and seaport of Willemstad, Curaçao, Netherlands Antilles. Analyses of terminal restriction fragment length polymorphisms (TRFLP) of 16S rRNA gene sequences show significant differences in bacterial communities of polluted and control localities only at the shallowest seawater depth. Furthermore, distinct differences in bacterial communities were found with increasing water depth. Comparisons of TRFLP peaks with sequenced clone libraries indicate the black band disease cyanobacterium clone CD1C11 is common and most abundant on healthy corals in less than 10 m water depth. Similarly, sequences belonging to a previously unrecognized group of likely phototrophic bacteria, herein referred to as CAB-I, were also more common in shallow water. To assess the influence of environmental and physiologic factors on bacterial community structure, canonical correspondence analysis was performed using explanatory variables associated with: (i) light availability; (ii) seawater pollution; (iii) coral mucus composition; (iv) the community structure of symbiotic algae; and (v) the photosynthetic activity of symbiotic algae. Eleven per cent of the variation in bacterial communities was accounted for by covariation with these variables; the most important being photosynthetically active radiation (sunlight) and the coral uptake of sewage-derived compounds as recorded by the delta(15)N of coral tissue.

  14. Responses of aerobic and anaerobic ammonia/ammonium-oxidizing microorganisms to anthropogenic pollution in coastal marine environments.

    PubMed

    Cao, Huiluo; Li, Meng; Dang, Hongyue; Gu, Ji-Dong

    2011-01-01

    Up to date, numerous studies have shown that the community structure of aerobic ammonia oxidizers including ammonia-oxidizing Betaproteobacteria (Beta-AOB) and ammonia-oxidizing archaea (AOA) and, more recently, the anaerobic ammonium-oxidizing (anammox) bacteria is responsive to environmental conditions including salinity, pH, selected metal ions, concentrations of inorganic nitrogen, total phosphorus, the ratio of organic carbon and nitrogen, and sedimentological factors such as the sediment median grain size. Identification of these responses to known anthropogenic pollution is of particular interest to better understand the growth dynamics and activities of nitrogen transforming microorganisms in marine environments. This chapter discusses currently available methods including molecular ecological analysis using clone library constructions with specific molecular genetic markers for delineating community changes of Beta-AOB, AOA, and anammox bacteria. Using data on ammonia-oxidizing microbial community structures from Jiaozhou Bay in North China and three marine environments with anthropogenic pollution gradients in South China from coastal Mai Po Nature Reserve of Hong Kong to the South China Sea as examples, statistical analyses packages (DOTUR, UniFrac, and Canoco) are presented as useful tools to illustrate the relationship between changes in nitrogen metabolizing microbial communities and established environmental variables. PMID:21514459

  15. Responses of aerobic and anaerobic ammonia/ammonium-oxidizing microorganisms to anthropogenic pollution in coastal marine environments.

    PubMed

    Cao, Huiluo; Li, Meng; Dang, Hongyue; Gu, Ji-Dong

    2011-01-01

    Up to date, numerous studies have shown that the community structure of aerobic ammonia oxidizers including ammonia-oxidizing Betaproteobacteria (Beta-AOB) and ammonia-oxidizing archaea (AOA) and, more recently, the anaerobic ammonium-oxidizing (anammox) bacteria is responsive to environmental conditions including salinity, pH, selected metal ions, concentrations of inorganic nitrogen, total phosphorus, the ratio of organic carbon and nitrogen, and sedimentological factors such as the sediment median grain size. Identification of these responses to known anthropogenic pollution is of particular interest to better understand the growth dynamics and activities of nitrogen transforming microorganisms in marine environments. This chapter discusses currently available methods including molecular ecological analysis using clone library constructions with specific molecular genetic markers for delineating community changes of Beta-AOB, AOA, and anammox bacteria. Using data on ammonia-oxidizing microbial community structures from Jiaozhou Bay in North China and three marine environments with anthropogenic pollution gradients in South China from coastal Mai Po Nature Reserve of Hong Kong to the South China Sea as examples, statistical analyses packages (DOTUR, UniFrac, and Canoco) are presented as useful tools to illustrate the relationship between changes in nitrogen metabolizing microbial communities and established environmental variables.

  16. Megacities and large urban agglomerations in the coastal zone: interactions between atmosphere, land, and marine ecosystems.

    PubMed

    von Glasow, Roland; Jickells, Tim D; Baklanov, Alexander; Carmichael, Gregory R; Church, Tom M; Gallardo, Laura; Hughes, Claire; Kanakidou, Maria; Liss, Peter S; Mee, Laurence; Raine, Robin; Ramachandran, Purvaja; Ramesh, R; Sundseth, Kyrre; Tsunogai, Urumu; Uematsu, Mitsuo; Zhu, Tong

    2013-02-01

    Megacities are not only important drivers for socio-economic development but also sources of environmental challenges. Many megacities and large urban agglomerations are located in the coastal zone where land, atmosphere, and ocean meet, posing multiple environmental challenges which we consider here. The atmospheric flow around megacities is complicated by urban heat island effects and topographic flows and sea breezes and influences air pollution and human health. The outflow of polluted air over the ocean perturbs biogeochemical processes. Contaminant inputs can damage downstream coastal zone ecosystem function and resources including fisheries, induce harmful algal blooms and feedback to the atmosphere via marine emissions. The scale of influence of megacities in the coastal zone is hundreds to thousands of kilometers in the atmosphere and tens to hundreds of kilometers in the ocean. We list research needs to further our understanding of coastal megacities with the ultimate aim to improve their environmental management.

  17. Biogeochemical Insights into B-Vitamins in the Coastal Marine Sediments of San Pedro Basin, CA

    NASA Astrophysics Data System (ADS)

    Monteverde, D.; Berelson, W.; Baronas, J. J.; Sanudo-Wilhelmy, S. A.

    2015-12-01

    Coastal marine sediments support a high abundance of mircoorganisms which play key roles in the cycling of nutrients, trace metals, and carbon, yet little is known about many of the cofactors essential for their growth, such as the B-vitamins. The suite of B-vitamins (B1, B2, B6, B7, B12) are essential across all domains of life for both primary and secondary metabolism. Therefore, studying sediment concentrations of B-vitamins can provide a biochemical link between microbial processes and sediment geochemistry. Here we present B-vitamin pore water concentrations from suboxic sediment cores collected in September 2014 from San Pedro Basin, a silled, low oxygen, ~900 m deep coastal basin in the California Borderlands. We compare the B-vitamin concentrations (measured via LCMS) to a set of geochemical profiles including dissolved Fe (65-160 μM), dissolved Mn (30-300 nM), TCO2, solid phase organic carbon, and δ13C. Our results show high concentrations (0.8-3nM) of biotin (B7), commonly used for CO2 fixation as a cofactor in carboxylase enzymes. Thiamin (B1) concentrations were elevated (20-700nM), consistent with previous pore water measurements showing sediments could be a source of B1 to the ocean. Cobalamin (B12), a cofactor required for methyl transfers in methanogens, was also detected in pore waters (~4-40pM). The flavins (riboflavin [B2] and flavin mononucleotide[FMN]), molecules utilized in external electron transfer, showed a distinct increase with depth (10-90nM). Interestingly, the flavin profiles showed an inverse trend to dissolved Fe (Fe decreases with depth) providing a potential link to culture experiments which have shown extracellular flavin release to be a common trait in some metal reducers. As some of the first B-vitamin measurements made in marine sediments, these results illustrate the complex interaction between the microbial community and surrounding geochemical environment and provide exciting avenues for future research.

  18. The impacts of tourism on coral reef conservation awareness and support in coastal communities in Belize

    NASA Astrophysics Data System (ADS)

    Diedrich, A.

    2007-12-01

    Marine recreational tourism is one of a number of threats to the Belize Barrier Reef but, conversely, represents both a motivation and source of resources for its conservation. The growth of tourism in Belize has resulted in the fact that many coastal communities are in varying stages of a socio-economic shift from dependence on fishing to dependence on tourism. In a nation becoming increasingly dependent on the health of its coral reef ecosystems for economic prosperity, a shift from extractive uses to their preservation is both necessary and logical. Through examining local perception data in five coastal communities in Belize, each attracting different levels of coral reef related tourism, this analysis is intended to explore the relationship between tourism development and local coral reef conservation awareness and support. The results of the analysis show a positive correlation between tourism development and coral reef conservation awareness and support in the study communities. The results also show a positive correlation between tourism development and local perceptions of quality of life, a trend that is most likely the source of the observed relationship between tourism and conservation. The study concludes that, because the observed relationship may be dependent on continued benefits from tourism as opposed to a perceived crisis in coral reef health, Belize must pay close attention to tourism impacts in the future. Failure to do this could result in a destructive feedback loop that would contribute to the degradation of the reef and, ultimately, Belize’s diminished competitiveness in the ecotourism market.

  19. Darwin's naturalization hypothesis: scale matters in coastal plant communities.

    PubMed

    Carboni, Marta; Münkemüller, Tamara; Gallien, Laure; Lavergne, Sébastien; Acosta, Alicia; Thuiller, Wilfried

    2013-04-01

    Darwin proposed two seemingly contradictory hypotheses for a better understanding of biological invasions. Strong relatedness of invaders to native communities as an indication of niche overlap could promote naturalization because of appropriate niche adaptation, but could also hamper naturalization because of negative interactions with native species ('Darwin's naturalization hypothesis'). Although these hypotheses provide clear and opposing predictions for expected patterns of species relatedness in invaded communities, so far no study has been able to clearly disentangle the underlying mechanisms. We hypothesize that conflicting past results are mainly due to the neglected role of spatial resolution of the community sampling. In this study, we corroborate both of Darwin's expectations by using phylogenetic relatedness as a measure of niche overlap and by testing the effects of sampling resolution in highly invaded coastal plant communities. At spatial resolutions fine enough to detect signatures of biotic interactions, we find that most invaders are less related to their nearest relative in invaded plant communities than expected by chance (phylogenetic overdispersion). Yet at coarser spatial resolutions, native assemblages become more invasible for closely-related species as a consequence of habitat filtering (phylogenetic clustering). Recognition of the importance of the spatial resolution at which communities are studied allows apparently contrasting theoretical and empirical results to be reconciled. Our study opens new perspectives on how to better detect, differentiate and understand the impact of negative biotic interactions and habitat filtering on the ability of invaders to establish in native communities.

  20. Carbon budgets and potential blue carbon stores in Scotland's coastal and marine environment

    NASA Astrophysics Data System (ADS)

    Howe, John; austin, william

    2016-04-01

    The role of marine ecosystems in storing blue carbon has increasingly become a topic of interest to both scientists and politicians. This is the first multidisciplinary study to assess Scotland's marine blue carbon stores, using GIS to collate habitat information based on existing data. Relevant scientific information on primary habitats for carbon uptake and storage has been reviewed, and quantitative rates of production and storage were obtained. Habitats reviewed include kelp, phytoplankton, saltmarshes, biogenic reefs (including maerl), marine sediments (coastal and shelf), and postglacial geological sediments. Each habitat has been individually assessed for any specific threats to its carbon sequestration ability. Here we present an ecosystem-scale inventory of the key rates and ultimate sequestration capacity of each habitat. Coastal and offshore sediments are the main repositories for carbon in Scotland's marine environment. Habitat-forming species on the coast (seagrasses, saltmarsh, bivalve beds, coralline algae), are highly productive but their contribution to the overall carbon budget is very small because of the limited extent of each habitat. This study highlights the importance of marine carbon stores in global carbon cycles, and the implications of climate change on the ability of marine ecosystems to sequester carbon.

  1. Accumulation of radionuclides in selected marine biota from Manjung coastal area

    NASA Astrophysics Data System (ADS)

    Abdullah, Anisa; Hamzah, Zaini; Saat, Ahmad; Wood, Ab. Khalik; Alias, Masitah

    2015-04-01

    Distribution of radionuclides from anthropogenic activities has been intensively studied due to the accumulation of radionuclides in marine ecosystem. Manjung area is affected by rapid population growth and socio-economic development such as heavy industrial activities including coal fired power plant, iron foundries, port development and factories, agricultural runoff, waste and toxic discharge from factories.It has radiological risk and toxic effect when effluent from the industries in the area containing radioactive materials either being transported to the atmosphere and deposited back over the land or by run off to the river and flow into coastal area and being absorbed by marine biota. Radionuclides presence in the marine ecosystem can be adversely affect human health when it enters the food chain. This study is focusing on the radionuclides [thorium (Th), uranium (U), radium-226 (226Ra), radium-228 (228Ra) and potassium-40 (40K)] content in marine biota and sea water from Manjung coastal area. Five species of marine biota including Johnius dussumieri (Ikan Gelama), Pseudorhombus malayanus (Ikan Sebelah), Arius maculatus (Ikan Duri), Portunus pelagicus (Ketam Renjong) and Charybdis natator (Ketam Salib) were collected during rainy and dry seasons. Measurements were carried out using Inductively Coupled Plasma Mass Spectrometer (ICPMS). The results show that the concentration of radionuclides varies depends on ecological environment of respective marine biota species. The concentrations and activity concentrations are used for the assessment of potential internal hazard index (Hin), transfer factor (TF), ingestion dose rate (D) and health risk index (HRI) to monitor radiological risk for human consumption.

  2. Organization of marine phenology data in support of planning and conservation in ocean and coastal ecosystems

    USGS Publications Warehouse

    Thomas, Kathryn A.; Fornwall, Mark D.; Weltzin, Jake F.; Griffis, R.B.

    2014-01-01

    Among the many effects of climate change is its influence on the phenology of biota. In marine and coastal ecosystems, phenological shifts have been documented for multiple life forms; however, biological data related to marine species' phenology remain difficult to access and is under-used. We conducted an assessment of potential sources of biological data for marine species and their availability for use in phenological analyses and assessments. Our evaluations showed that data potentially related to understanding marine species' phenology are available through online resources of governmental, academic, and non-governmental organizations, but appropriate datasets are often difficult to discover and access, presenting opportunities for scientific infrastructure improvement. The developing Federal Marine Data Architecture when fully implemented will improve data flow and standardization for marine data within major federal repositories and provide an archival repository for collaborating academic and public data contributors. Another opportunity, largely untapped, is the engagement of citizen scientists in standardized collection of marine phenology data and contribution of these data to established data flows. Use of metadata with marine phenology related keywords could improve discovery and access to appropriate datasets. When data originators choose to self-publish, publication of research datasets with a digital object identifier, linked to metadata, will also improve subsequent discovery and access. Phenological changes in the marine environment will affect human economics, food systems, and recreation. No one source of data will be sufficient to understand these changes. The collective attention of marine data collectors is needed—whether with an agency, an educational institution, or a citizen scientist group—toward adopting the data management processes and standards needed to ensure availability of sufficient and useable marine data to understand

  3. Microplastics in coastal and marine environments of the western tropical and sub-tropical Atlantic Ocean.

    PubMed

    Costa, Monica F; Barletta, Mário

    2015-11-01

    Microplastic pollution is a global issue. It is present even in remote and pristine coastal and marine environments, likely causing impacts of unknown scale. Microplastics are primary- and secondary-sourced plastics with diameters of 5 mm or less that are either free in the water column or mixed in sandy and muddy sediments. Since the early 1970s, they have been reported to pollute marine environments; recently, concern has increased as soaring amounts of microplastics in the oceans were detected and because the development of unprecedented processes involving this pollutant at sea is being unveiled. Coastal and marine environments of the western tropical and sub-tropical Atlantic Ocean (WTAO) are contaminated with microplastics at different quantities and from a variety of types. The main environmental compartments (water, sediments and biota) are contaminated, but the consequences are still poorly understood. Rivers and all scales of fishery activities are identified as the most likely sources of this pollutant to coastal waters; however, based on the types of microplastics observed, other maritime operations are also possible sources. Ingestion by marine biota occurs in the vertebrate groups (fish, birds, and turtles) in these environments. In addition, the presence of microplastics in plankton samples from different habitats of estuaries and oceanic islands is confirmed. The connectivity among environmental compartments regarding microplastic pollution is a new research frontier in the region.

  4. Microplastics in coastal and marine environments of the western tropical and sub-tropical Atlantic Ocean.

    PubMed

    Costa, Monica F; Barletta, Mário

    2015-11-01

    Microplastic pollution is a global issue. It is present even in remote and pristine coastal and marine environments, likely causing impacts of unknown scale. Microplastics are primary- and secondary-sourced plastics with diameters of 5 mm or less that are either free in the water column or mixed in sandy and muddy sediments. Since the early 1970s, they have been reported to pollute marine environments; recently, concern has increased as soaring amounts of microplastics in the oceans were detected and because the development of unprecedented processes involving this pollutant at sea is being unveiled. Coastal and marine environments of the western tropical and sub-tropical Atlantic Ocean (WTAO) are contaminated with microplastics at different quantities and from a variety of types. The main environmental compartments (water, sediments and biota) are contaminated, but the consequences are still poorly understood. Rivers and all scales of fishery activities are identified as the most likely sources of this pollutant to coastal waters; however, based on the types of microplastics observed, other maritime operations are also possible sources. Ingestion by marine biota occurs in the vertebrate groups (fish, birds, and turtles) in these environments. In addition, the presence of microplastics in plankton samples from different habitats of estuaries and oceanic islands is confirmed. The connectivity among environmental compartments regarding microplastic pollution is a new research frontier in the region. PMID:26457869

  5. Bulk elastic moduli and solute potentials in leaves of freshwater, coastal and marine hydrophytes. Are marine plants more rigid?

    PubMed

    Touchette, Brant W; Marcus, Sarah E; Adams, Emily C

    2014-03-28

    Bulk modulus of elasticity (ɛ), depicting the flexibility of plant tissues, is recognized as an important component in maintaining internal water balance. Elevated ɛ and comparatively low osmotic potential (Ψπ) may work in concert to effectively maintain vital cellular water content. This concept, termed the 'cell water conservation hypothesis', may foster tolerance for lower soil-water potentials in plants while minimizing cell dehydration and shrinkage. Therefore, the accumulation of solutes in marine plants, causing decreases in Ψπ, play an important role in plant-water relations and likely works with higher ɛ to achieve favourable cell volumes. While it is generally held that plants residing in marine systems have higher leaf tissue ɛ, to our knowledge no study has specifically addressed this notion in aquatic and wetland plants residing in marine and freshwater systems. Therefore, we compared ɛ and Ψπ in leaf tissues of 38 freshwater, coastal and marine plant species using data collected in our laboratory, with additional values from the literature. Overall, 8 of the 10 highest ɛ values were observed in marine plants, and 20 of the lowest 25 ɛ values were recorded in freshwater plants. As expected, marine plants often had lower Ψπ, wherein the majority of marine plants were below -1.0 MPa and the majority of freshwater plants were above -1.0 MPa. While there were no differences among habitat type and symplastic water content (θsym), we did observe higher θsym in shrubs when compared with graminoids, and believe that the comparatively low θsym observed in aquatic grasses may be attributed to their tendency to develop aerenchyma that hold apoplastic water. These results, with few exceptions, support the premise that leaf tissues of plants acclimated to marine environments tend to have higher ɛ and lower Ψπ, and agree with the general tenets of the cell water conservation hypothesis.

  6. Bulk elastic moduli and solute potentials in leaves of freshwater, coastal and marine hydrophytes. Are marine plants more rigid?

    PubMed Central

    Touchette, Brant W.; Marcus, Sarah E.; Adams, Emily C.

    2014-01-01

    Bulk modulus of elasticity (ɛ), depicting the flexibility of plant tissues, is recognized as an important component in maintaining internal water balance. Elevated ɛ and comparatively low osmotic potential (Ψπ) may work in concert to effectively maintain vital cellular water content. This concept, termed the ‘cell water conservation hypothesis’, may foster tolerance for lower soil-water potentials in plants while minimizing cell dehydration and shrinkage. Therefore, the accumulation of solutes in marine plants, causing decreases in Ψπ, play an important role in plant–water relations and likely works with higher ɛ to achieve favourable cell volumes. While it is generally held that plants residing in marine systems have higher leaf tissue ɛ, to our knowledge no study has specifically addressed this notion in aquatic and wetland plants residing in marine and freshwater systems. Therefore, we compared ɛ and Ψπ in leaf tissues of 38 freshwater, coastal and marine plant species using data collected in our laboratory, with additional values from the literature. Overall, 8 of the 10 highest ɛ values were observed in marine plants, and 20 of the lowest 25 ɛ values were recorded in freshwater plants. As expected, marine plants often had lower Ψπ, wherein the majority of marine plants were below −1.0 MPa and the majority of freshwater plants were above −1.0 MPa. While there were no differences among habitat type and symplastic water content (θsym), we did observe higher θsym in shrubs when compared with graminoids, and believe that the comparatively low θsym observed in aquatic grasses may be attributed to their tendency to develop aerenchyma that hold apoplastic water. These results, with few exceptions, support the premise that leaf tissues of plants acclimated to marine environments tend to have higher ɛ and lower Ψπ, and agree with the general tenets of the cell water conservation hypothesis. PMID:24876296

  7. Marine protected areas increase resilience among coral reef communities.

    PubMed

    Mellin, Camille; Aaron MacNeil, M; Cheal, Alistair J; Emslie, Michael J; Julian Caley, M

    2016-06-01

    With marine biodiversity declining globally at accelerating rates, maximising the effectiveness of conservation has become a key goal for local, national and international regulators. Marine protected areas (MPAs) have been widely advocated for conserving and managing marine biodiversity yet, despite extensive research, their benefits for conserving non-target species and wider ecosystem functions remain unclear. Here, we demonstrate that MPAs can increase the resilience of coral reef communities to natural disturbances, including coral bleaching, coral diseases, Acanthaster planci outbreaks and storms. Using a 20-year time series from Australia's Great Barrier Reef, we show that within MPAs, (1) reef community composition was 21-38% more stable; (2) the magnitude of disturbance impacts was 30% lower and (3) subsequent recovery was 20% faster that in adjacent unprotected habitats. Our results demonstrate that MPAs can increase the resilience of marine communities to natural disturbance possibly through herbivory, trophic cascades and portfolio effects.

  8. Marine protected areas increase resilience among coral reef communities.

    PubMed

    Mellin, Camille; Aaron MacNeil, M; Cheal, Alistair J; Emslie, Michael J; Julian Caley, M

    2016-06-01

    With marine biodiversity declining globally at accelerating rates, maximising the effectiveness of conservation has become a key goal for local, national and international regulators. Marine protected areas (MPAs) have been widely advocated for conserving and managing marine biodiversity yet, despite extensive research, their benefits for conserving non-target species and wider ecosystem functions remain unclear. Here, we demonstrate that MPAs can increase the resilience of coral reef communities to natural disturbances, including coral bleaching, coral diseases, Acanthaster planci outbreaks and storms. Using a 20-year time series from Australia's Great Barrier Reef, we show that within MPAs, (1) reef community composition was 21-38% more stable; (2) the magnitude of disturbance impacts was 30% lower and (3) subsequent recovery was 20% faster that in adjacent unprotected habitats. Our results demonstrate that MPAs can increase the resilience of marine communities to natural disturbance possibly through herbivory, trophic cascades and portfolio effects. PMID:27038889

  9. Residue profiles of brodifacoum in coastal marine species following an island rodent eradication.

    PubMed

    Masuda, Bryce M; Fisher, Penny; Beaven, Brent

    2015-03-01

    The second-generation anticoagulant rodenticide brodifacoum is an effective tool for the eradication of invasive rodents from islands and fenced sanctuaries, for biodiversity restoration. However, broadcast application of brodifacoum bait on islands may expose non-target wildlife in coastal marine environments to brodifacoum, with subsequent secondary exposure risk for humans if such marine wildlife is harvested for consumption. We report a case study of monitoring selected marine species following aerial application of brodifacoum bait in August 2011 to eradicate Norway rats (Rattus norvegicus) from Ulva Island, New Zealand. Residual concentrations of brodifacoum were detected in 3 of 10 species of coastal fish or shellfish sampled 43-176d after bait application commenced. Residual brodifacoum concentrations were found in liver, but not muscle tissue, of 2 of 24 samples of blue cod (0.026 and 0.092 µg/g; Parapercis colias) captured live then euthanized for tissue sampling. Residual brodifacoum concentrations were also found in whole-body samples of 4 of 24 mussels (range=0.001-0.022 µg/g, n=4; Mytilus edulis) and 4 of 24 limpets (range=0.001-0.016 µg/g, n=4; Cellana ornata). Measured residue concentrations in all three species were assessed as unlikely to have eventually caused mortality of the sampled individuals. We also conducted a literature review and determined that in eleven previous accounts of residue examination of coastal marine species following aerial applications of brodifacoum bait, including our results from Ulva Island, the overall rate of residue detection was 5.6% for marine invertebrates (11 of 196 samples tested) and 3.1% for fish (2 of 65 samples tested). Furthermore, our results from Ulva Island are the first known detection of brodifacoum residue in fish liver following an aerial application of brodifacoum bait. Although our findings confirm the potential for coastal marine wildlife to be exposed to brodifacoum following island rodent

  10. Pole-to-pole biogeography of surface and deep marine bacterial communities

    PubMed Central

    Ghiglione, Jean-François; Galand, Pierre E.; Pommier, Thomas; Pedrós-Alió, Carlos; Maas, Elizabeth W.; Bakker, Kevin; Bertilson, Stefan; Kirchman, David L.; Lovejoy, Connie; Yager, Patricia L.; Murray, Alison E.

    2012-01-01

    The Antarctic and Arctic regions offer a unique opportunity to test factors shaping biogeography of marine microbial communities because these regions are geographically far apart, yet share similar selection pressures. Here, we report a comprehensive comparison of bacterioplankton diversity between polar oceans, using standardized methods for pyrosequencing the V6 region of the small subunit ribosomal (SSU) rRNA gene. Bacterial communities from lower latitude oceans were included, providing a global perspective. A clear difference between Southern and Arctic Ocean surface communities was evident, with 78% of operational taxonomic units (OTUs) unique to the Southern Ocean and 70% unique to the Arctic Ocean. Although polar ocean bacterial communities were more similar to each other than to lower latitude pelagic communities, analyses of depths, seasons, and coastal vs. open waters, the Southern and Arctic Ocean bacterioplankton communities consistently clustered separately from each other. Coastal surface Southern and Arctic Ocean communities were more dissimilar from their respective open ocean communities. In contrast, deep ocean communities differed less between poles and lower latitude deep waters and displayed different diversity patterns compared with the surface. In addition, estimated diversity (Chao1) for surface and deep communities did not correlate significantly with latitude or temperature. Our results suggest differences in environmental conditions at the poles and different selection mechanisms controlling surface and deep ocean community structure and diversity. Surface bacterioplankton may be subjected to more short-term, variable conditions, whereas deep communities appear to be structured by longer water-mass residence time and connectivity through ocean circulation. PMID:23045668

  11. Coastal habitats as surrogates for taxonomic, functional and trophic structures of benthic faunal communities.

    PubMed

    Törnroos, Anna; Nordström, Marie C; Bonsdorff, Erik

    2013-01-01

    Due to human impact, there is extensive degradation and loss of marine habitats, which calls for measures that incorporate taxonomic as well as functional and trophic aspects of biodiversity. Since such data is less easily quantifiable in nature, the use of habitats as surrogates or proxies for biodiversity is on the rise in marine conservation and management. However, there is a critical gap in knowledge of whether pre-defined habitat units adequately represent the functional and trophic structure of communities. We also lack comparisons of different measures of community structure in terms of both between- (β) and within-habitat (α) variability when accounting for species densities. Thus, we evaluated a priori defined coastal habitats as surrogates for traditional taxonomic, functional and trophic zoobenthic community structure. We focused on four habitats (bare sand, canopy-forming algae, seagrass above- and belowground), all easily delineated in nature and defined through classification systems. We analyzed uni- and multivariate data on species and trait diversity as well as stable isotope ratios of benthic macrofauna. A good fit between habitat types and taxonomic and functional structure was found, although habitats were more similar functionally. This was attributed to within-habitat heterogeneity so when habitat divisions matched the taxonomic structure, only bare sand was functionally distinct. The pre-defined habitats did not meet the variability of trophic structure, which also proved to differentiate on a smaller spatial scale. The quantification of trophic structure using species density only identified an epi- and an infaunal unit. To summarize the results we present a conceptual model illustrating the match between pre-defined habitat types and the taxonomic, functional and trophic community structure. Our results show the importance of including functional and trophic aspects more comprehensively in marine management and spatial planning.

  12. Marine subsidies have multiple effects on coastal food webs.

    PubMed

    Spiller, David A; Piovia-Scorr, Jonah; Wright, Amber N; Yang, Louie H; Takimoto, Gaku; Schoener, Thomas W; Iwata, Tomoya

    2010-05-01

    The effect of resource subsidies on recipient food webs has received much recent attention. The purpose of this study was to measure the effects of significant seasonal seaweed deposition events, caused by hurricanes and other storms, on species inhabiting subtropical islands. The seaweed represents a pulsed resource subsidy that is consumed by amphipods and flies, which are eaten by lizards and predatory arthropods, which in turn consume terrestrial herbivores. Additionally, seaweed decomposes directly into the soil under plants. We added seaweed to six shoreline plots and removed seaweed from six other plots for three months; all plots were repeatedly monitored for 12 months after the initial manipulation. Lizard density (Anolis sagrei) responded rapidly, and the overall average was 63% higher in subsidized than in removal plots. Stable-isotope analysis revealed a shift in lizard diet composition toward more marine-based prey in subsidized plots. Leaf damage was 70% higher in subsidized than in removal plots after eight months, but subsequent damage was about the same in the two treatments. Foliage growth rate was 70% higher in subsidized plots after 12 months. Results of a complementary study on the relationship between natural variation in marine subsidies and island food web components were consistent with the experimental results. We suggest two causal pathways for the effects of marine subsidies on terrestrial plants: (1) the "fertilization effect" in which seaweed adds nutrients to plants, increasing their growth rate, and (2) the "predator diet shift effect" in which lizards shift from eating local prey (including terrestrial herbivores) to eating mostly marine detritivores.

  13. Monitoring ship noise to assess the impact of coastal developments on marine mammals.

    PubMed

    Merchant, Nathan D; Pirotta, Enrico; Barton, Tim R; Thompson, Paul M

    2014-01-15

    The potential impacts of underwater noise on marine mammals are widely recognised, but uncertainty over variability in baseline noise levels often constrains efforts to manage these impacts. This paper characterises natural and anthropogenic contributors to underwater noise at two sites in the Moray Firth Special Area of Conservation, an important marine mammal habitat that may be exposed to increased shipping activity from proposed offshore energy developments. We aimed to establish a pre-development baseline, and to develop ship noise monitoring methods using Automatic Identification System (AIS) and time-lapse video to record trends in noise levels and shipping activity. Our results detail the noise levels currently experienced by a locally protected bottlenose dolphin population, explore the relationship between broadband sound exposure levels and the indicators proposed in response to the EU Marine Strategy Framework Directive, and provide a ship noise assessment toolkit which can be applied in other coastal marine environments. PMID:24279956

  14. The Whale Pump: Marine Mammals Enhance Primary Productivity in a Coastal Basin

    PubMed Central

    Roman, Joe; McCarthy, James J.

    2010-01-01

    It is well known that microbes, zooplankton, and fish are important sources of recycled nitrogen in coastal waters, yet marine mammals have largely been ignored or dismissed in this cycle. Using field measurements and population data, we find that marine mammals can enhance primary productivity in their feeding areas by concentrating nitrogen near the surface through the release of flocculent fecal plumes. Whales and seals may be responsible for replenishing 2.3×104 metric tons of N per year in the Gulf of Maine's euphotic zone, more than the input of all rivers combined. This upward “whale pump” played a much larger role before commercial harvest, when marine mammal recycling of nitrogen was likely more than three times atmospheric N input. Even with reduced populations, marine mammals provide an important ecosystem service by sustaining productivity in regions where they occur in high densities. PMID:20949007

  15. Monitoring ship noise to assess the impact of coastal developments on marine mammals.

    PubMed

    Merchant, Nathan D; Pirotta, Enrico; Barton, Tim R; Thompson, Paul M

    2014-01-15

    The potential impacts of underwater noise on marine mammals are widely recognised, but uncertainty over variability in baseline noise levels often constrains efforts to manage these impacts. This paper characterises natural and anthropogenic contributors to underwater noise at two sites in the Moray Firth Special Area of Conservation, an important marine mammal habitat that may be exposed to increased shipping activity from proposed offshore energy developments. We aimed to establish a pre-development baseline, and to develop ship noise monitoring methods using Automatic Identification System (AIS) and time-lapse video to record trends in noise levels and shipping activity. Our results detail the noise levels currently experienced by a locally protected bottlenose dolphin population, explore the relationship between broadband sound exposure levels and the indicators proposed in response to the EU Marine Strategy Framework Directive, and provide a ship noise assessment toolkit which can be applied in other coastal marine environments.

  16. Evolution of a Mediterranean Coastal Zone: Human Impacts on the Marine Environment of Cape Creus

    NASA Astrophysics Data System (ADS)

    Lloret, Josep; Riera, Victòria

    2008-12-01

    This study presents an integrated analysis of the evolution of the marine environment and the human uses in Cape Creus, a Mediterranean coastal area where intense commercial fisheries and recreational uses have coexisted over the last fifty years. The investigation synthesizes the documented impacts of human activities on the marine environment of Cap de Creus and integrates them with new data. In particular, the evolution of vulnerable, exploited species is used to evaluate the fishing impacts. The effects of area protection through the establishment of a marine reserve in the late 1990s and the potential climate change impacts are also considered. The evolution of the human uses is marked by the increasing socioeconomic importance of recreational activities (which affect species and habitats) in detriment to artisanal and red coral fisheries (which principally affect at a species level). Overall, populations of sedentary, vulnerable exploited species, hard sessile benthic invertebrates, and ecologically fragile habitats, such as seagrass meadows, the coralligenous and infralittoral algal assemblages have been the most negatively impacted by anthropogenic activities. Albeit human uses currently constitute the largest negative impact on the marine environment of Cap de Creus, climate change is emerging as a key factor that could have considerable implications for the marine environment and tourism activities. The establishment of the marine reserve appears to have had little socioeconomic impact, but there is some evidence that it had some positive biological effects on sedentary, littoral fishes. Results demonstrate that the declaration of a marine reserve alone does not guarantee the sustainability of marine resources and habitats but should be accompanied with an integrated coastal management plan.

  17. Evolution of a Mediterranean coastal zone: human impacts on the marine environment of Cape Creus.

    PubMed

    Lloret, Josep; Riera, Victòria

    2008-12-01

    This study presents an integrated analysis of the evolution of the marine environment and the human uses in Cape Creus, a Mediterranean coastal area where intense commercial fisheries and recreational uses have coexisted over the last fifty years. The investigation synthesizes the documented impacts of human activities on the marine environment of Cap de Creus and integrates them with new data. In particular, the evolution of vulnerable, exploited species is used to evaluate the fishing impacts. The effects of area protection through the establishment of a marine reserve in the late 1990s and the potential climate change impacts are also considered. The evolution of the human uses is marked by the increasing socioeconomic importance of recreational activities (which affect species and habitats) in detriment to artisanal and red coral fisheries (which principally affect at a species level). Overall, populations of sedentary, vulnerable exploited species, hard sessile benthic invertebrates, and ecologically fragile habitats, such as seagrass meadows, the coralligenous and infralittoral algal assemblages have been the most negatively impacted by anthropogenic activities. Albeit human uses currently constitute the largest negative impact on the marine environment of Cap de Creus, climate change is emerging as a key factor that could have considerable implications for the marine environment and tourism activities. The establishment of the marine reserve appears to have had little socioeconomic impact, but there is some evidence that it had some positive biological effects on sedentary, littoral fishes. Results demonstrate that the declaration of a marine reserve alone does not guarantee the sustainability of marine resources and habitats but should be accompanied with an integrated coastal management plan.

  18. Measuring Coastal Boating Noise to Assess Potential Impacts on Marine Life

    SciTech Connect

    Matzner, Shari; Jones, Mark E.

    2011-07-01

    Article requested for submission in Sea Technology Magazine describing the Underwater Noise From Small Boats. An Overlooked Component of the Acoustic Environment in Coastal Areas. Underwater noise and its effects on marine life deserve attention as human activity in the marine environment increases. Noise can affect fish and marine mammals in ways that are physiological, as in auditory threshold shifts, and behavioral, as in changes in foraging habits. One anthropogenic source of underwater noise that has received little attention to date is recreational boating. Coastal areas and archipelago regions, which play a crucial role in the marine ecosystem, are often subject to high levels of boat traffic. In order to better understand the noise produced by a small powerboat, a test was conducted in Sequim Bay, Washington, using an instrumented research vessel and multiple acoustic sensors. The broadband noise and narrowband peak levels were observed from two different locations while the boat was operated under various conditions. The results, combined with background noise levels, sound propagation and local boat traffic patterns, can provide a picture of the total boating noise to which marine life may be subjected.

  19. Bubble Stripping as a Tool To Reduce High Dissolved CO2 in Coastal Marine Ecosystems.

    PubMed

    Koweek, David A; Mucciarone, David A; Dunbar, Robert B

    2016-04-01

    High dissolved CO2 concentrations in coastal ecosystems are a common occurrence due to a combination of large ecosystem metabolism, shallow water, and long residence times. Many important coastal species may have adapted to this natural variability over time, but eutrophication and ocean acidification may be perturbing the water chemistry beyond the bounds of tolerance for these organisms. We are currently limited in our ability to deal with the geochemical changes unfolding in our coastal ocean. This study helps to address this deficit of solutions by introducing bubble stripping as a novel geochemical engineering approach to reducing high CO2 in coastal marine ecosystems. We use a process-based model to find that air/sea gas exchange rates within a bubbled system are 1-2 orders of magnitude higher than within a nonbubbled system. By coupling bubbling-enhanced ventilation to a coastal ecosystem metabolism model, we demonstrate that strategically timed bubble plumes can mitigate exposure to high CO2 under present-day conditions and that exposure mitigation is enhanced in the more acidic conditions predicted by the end of the century. We argue that shallow water CO2 bubble stripping should be considered among the growing list of engineering approaches intended to increase coastal resilience in a changing ocean.

  20. Bubble Stripping as a Tool To Reduce High Dissolved CO2 in Coastal Marine Ecosystems.

    PubMed

    Koweek, David A; Mucciarone, David A; Dunbar, Robert B

    2016-04-01

    High dissolved CO2 concentrations in coastal ecosystems are a common occurrence due to a combination of large ecosystem metabolism, shallow water, and long residence times. Many important coastal species may have adapted to this natural variability over time, but eutrophication and ocean acidification may be perturbing the water chemistry beyond the bounds of tolerance for these organisms. We are currently limited in our ability to deal with the geochemical changes unfolding in our coastal ocean. This study helps to address this deficit of solutions by introducing bubble stripping as a novel geochemical engineering approach to reducing high CO2 in coastal marine ecosystems. We use a process-based model to find that air/sea gas exchange rates within a bubbled system are 1-2 orders of magnitude higher than within a nonbubbled system. By coupling bubbling-enhanced ventilation to a coastal ecosystem metabolism model, we demonstrate that strategically timed bubble plumes can mitigate exposure to high CO2 under present-day conditions and that exposure mitigation is enhanced in the more acidic conditions predicted by the end of the century. We argue that shallow water CO2 bubble stripping should be considered among the growing list of engineering approaches intended to increase coastal resilience in a changing ocean. PMID:26988138

  1. U.S. Geological Survey coastal and marine geology research; recent highlights and achievements

    USGS Publications Warehouse

    Williams, S. Jeffress; Barnes, Peter W.; Prager, Ellen J.

    2000-01-01

    The USGS Coastal and Marine Geology Program has large-scale national and regional research projects that focus on environmental quality, geologic hazards, natural resources, and information transfer. This Circular highlights recent scientific findings of the program, which play a vital role in the USGS endeavor to understand human interactions with the natural environment and to determine how the fundamental geologic processes controlling the Earth work. The scientific knowledge acquired through USGS research and monitoring is critically needed by planners, government agencies, and the public. Effective communication of the results of this research will enable the USGS Coastal and Marine Geology Program to play an integral part in assisting the Nation in responding the pressing Earth science challenges of the 21st century.

  2. Marine mammals and debris in coastal waters of British Columbia, Canada.

    PubMed

    Williams, Rob; Ashe, Erin; O'Hara, Patrick D

    2011-06-01

    Entanglement in and ingestion of synthetic marine debris is increasingly recognized worldwide as an important stressor for marine wildlife, including marine mammals. Studying its impact on wildlife populations is complicated by the inherently cryptic nature of the problem. The coastal waters of British Columbia (BC), Canada provide important habitat for marine mammal species, many of which have unfavorable conservation status in the US and Canada. As a priority-setting exercise, we used data from systematic line-transect surveys and spatial modeling methods to map at-sea distribution of debris and 11 marine mammal species in BC waters, and to identify areas of overlap. We estimated abundance of 36,000 (CIs: 23,000-56,600) pieces of marine debris in the region. Areas of overlap were often far removed from urban centers, suggesting that the extent of marine mammal-debris interactions would be underestimated from opportunistic sightings and stranding records, and that high-overlap areas should be prioritized by stranding response networks. PMID:21665015

  3. Dinoflagellate species and organic facies evidence of marine transgression and regression in the atlantic coastal plain

    USGS Publications Warehouse

    Habib, D.; Miller, J.A.

    1989-01-01

    Palynological evidence is used to date and interpret depositional environments of sediments of Campanian, Maestrichtian and early Danian ages cored in three wells from South Carolina and Georgia. The evidence is usefil for distinguishing environments which lithofacies evidence indicates a range from nonmarine to coastal to inner neritic shallow shelf. Numerous dinoflagellate species and an organic facies defined abundant amoprphous debris (amorphous debris facies) distinguish shallow shelf sediments deposited during marine transgression. The nearshore amorphous debris facies of late Campanian age consists of heterogenous assemblages dominated by Palaeohystrichophora infusorioides Deflandre or Hystrichosphaerina varians (May). The farther offshore amorphous debris facies of late early Maestrichtian to late Maestrichtian age consists of heterogenous assemblages dominated by Glaphyrocysta retiintexta (Cookson) and/or Areoligera medusettiformis (Wetzel). The larger number of dinoflagellate species in the offshore facies represents the maximum transgression detected in the investigated interval. A multiple occurrence datum defined by the combination of first appearance, klast appearances and sole occurrence of dinoflagellate species at the base of each interval distinguished by the amorphous debris facies provides the first evidence of marine transgression. Relatively small organic residues consisting of intertinite and few or no palynomorphs define the inertinite facies in nonmarine deltaic and in coastal (lagoonal, tidal flat, interdistributary bary) sediments. Dinocyt{star, open}s are absent in the nonmarine sediments and are represented by few species and few specimens in the coastal inertinite faceis. A third organic facies (vascular tissue facies) is defined by the abundance of land plant tissue. Sporomorph species, including those of the Normapolles pollen group and of pteridophyte spores, comprise a large proportion of the total palynomorph flora in the

  4. Baseline monitoring of organic sunscreen compounds along South Carolina's coastal marine environment.

    PubMed

    Bratkovics, Stephanie; Wirth, Edward; Sapozhnikova, Yelena; Pennington, Paul; Sanger, Denise

    2015-12-15

    Organic ultraviolet filters (UV-F) are increasingly being used in personal care products to protect skin and other products from the damaging effects of UV radiation. In this study, marine water was collected monthly for approximately one year from six coastal South Carolina, USA sites and analyzed for the occurrence of seven organic chemicals used as UV filters (avobenzone, dioxybenzone, octocrylene, octinoxate, oxybenzone, padimate-o and sulisobenzone). The results were used to examine the relationship between beach use and the distribution of UV-F compounds along coastal South Carolina, USA. Five of the seven target analytes were detected in seawater along coastal South Carolina during this study. Dioxybenzone and sulisobenzone were not detected. The highest concentrations measured were >3700 ng octocrylene/L and ~2200 ng oxybenzone/L and beach use was greatest at this site; a local beach front park. Patterns in concentrations were assessed based on season and a measure of beach use.

  5. Floating marine debris in coastal waters of the SE-Pacific (Chile).

    PubMed

    Thiel, M; Hinojosa, I; Vásquez, N; Macaya, E

    2003-02-01

    Herein we report on the abundance and composition of floating marine debris (FMD) in coastal waters of the SE-Pacific (off the Chilean coast) during the austral summer 2002. The observed FMD consisted mainly of plastic material (86.9%). Densities of FMD were highest between 20 degrees S and 40 degrees S, corresponding to the main concentrations of human population and activities. Low densities of FMD were found in the south between 40 degrees S and 50 degrees S (<1 item km(-2)). Generally, the highest densities were recorded in nearshore waters of major port cities (>20 items km(-2)), but occasionally high concentrations of debris were also found 50 km offshore. Densities of FMD in coastal waters of the SE-Pacific are of similar magnitudes as those found in coastal waters or inland seas of highly populated regions in the northern hemisphere, indicating the need for improved regulation and legislation in the countries of the SE-Pacific.

  6. Baseline monitoring of organic sunscreen compounds along South Carolina's coastal marine environment.

    PubMed

    Bratkovics, Stephanie; Wirth, Edward; Sapozhnikova, Yelena; Pennington, Paul; Sanger, Denise

    2015-12-15

    Organic ultraviolet filters (UV-F) are increasingly being used in personal care products to protect skin and other products from the damaging effects of UV radiation. In this study, marine water was collected monthly for approximately one year from six coastal South Carolina, USA sites and analyzed for the occurrence of seven organic chemicals used as UV filters (avobenzone, dioxybenzone, octocrylene, octinoxate, oxybenzone, padimate-o and sulisobenzone). The results were used to examine the relationship between beach use and the distribution of UV-F compounds along coastal South Carolina, USA. Five of the seven target analytes were detected in seawater along coastal South Carolina during this study. Dioxybenzone and sulisobenzone were not detected. The highest concentrations measured were >3700 ng octocrylene/L and ~2200 ng oxybenzone/L and beach use was greatest at this site; a local beach front park. Patterns in concentrations were assessed based on season and a measure of beach use. PMID:26541983

  7. Report of the USGS Coastal and Marine Geology Modeling Workshop, Pacific Marine Science Center, Santa Cruz, CA, March 22-23, 2005

    USGS Publications Warehouse

    Sherwood, Christopher R.

    2006-01-01

    A U.S. Geological Survey (USGS) Coastal and Marine Geology (CMG) Modeling Workshop was held to discuss the general topic of coastal modeling, defined broadly to include circulation, waves, sediment transport, water quality, ecology, sediment diagenesis, morphology change, and coastal evolution, on scales ranging from seconds and a few centimeters (individual ripples) to centuries (coastal evolution) and thousands of kilometers (tsunami propagation). The workshop was convened at the suggestion of CMG Program Management to improve communication among modelers and model users, assess modeling-related activities being conducted at the three centers (Florida Integrated Science Center, FISC; Pacific Marine Science Center; PMSC; and Woods Hole Science Center; WHSC), and develop goals, strategies, and plans for future modeling activities. The workshop represents a step toward developing a five-year strategic plan, and was timed to provide input for the FY06 prospectus. The workshop was held at the USGS Pacific Marine Science Center in Santa Cruz on March 22-23, 2005.

  8. Progress in marine science supported by European joint coastal observation systems: The JERICO-RI research infrastructure

    NASA Astrophysics Data System (ADS)

    Puillat, I.; Farcy, P.; Durand, D.; Karlson, B.; Petihakis, G.; Seppälä, J.; Sparnocchia, S.

    2016-10-01

    Coastal systems are of the most productive ones although they are the most impacted by direct pressures from human activities. These ecosystems exhibit a high level of complexity with many different and interconnected processes operating at various spatial and temporal scales and providing a range of ecosystem services. Coastal observations are tremendous importance in order to understand those complex marine processes. Moreover, they support the use and further development of coastal ocean numerical models, including physical models and coupled physical-biogeochemical models. Coastal data have also many applications in the domain of coastal engineering such as for instance in the design of a coastal structure, or in the prevention of extreme events (e.g. flooding). As a consequence, the number of marine observing systems has quickly increased around European coastal seas, under the pressure of both monitoring requirements and marine research. Present demands for such observing systems include reliable, high-quality and comprehensive observations of key environmental parameters, automated platforms and sensors systems for continuous observations, as well as autonomy over long time periods. In-situ data collected can be combined with remote sensing and/or models to detect, understand and/or forecast the most crucial coastal processes over extensive areas within the various marine environments.

  9. Coastal Community Adaptation to Future Potential Climate Change

    NASA Astrophysics Data System (ADS)

    Prime, Thomas

    2014-05-01

    This research project aims to determine the physical and economic resilience of coastal communities. This translates into identifying how such communities can adapt to potential future climate change in the most efficient cost effective way. Fleetwood in Lancashire has been chosen as a case study site, with recently refurbished sea defences. This research is interested in the best way to maintain resilience of the defences over long time horizons and against low probability high impact events as the coastal defences deteriorate. We assess coastal flood risk using a flood inundation model called LISFLOOD-FP, this is a 2D hydrodynamic model designed to simulate flood inundation over complex topography. LISFLOOD-FP predicts water depths in each grid cell at each time step, simulating the dynamic propagation of flood waves over fluvial, coastal and estuarine floodplains. The model is forced at the boundary with an extreme water level that has a defined probability of occurring, e.g. 1 in 100 years. This is combined with a scaled surge curve for the area, a high spring tidal curve and the addition of a sea level rise parameter, which is dependent on the defined time horizon and future carbon emissions scenarios. LISFLOOD-FP has been extended to simulate wave over-topping of sea defences, this is achieved by using a Shallow Water And Boussinesq (SWAB) 1D model which models wave over-topping of sea defences. The outputs from this model can be added into LISFLOOD as a flow of water that originates from the top of the sea defences and simulates the over topping. The simulation has also been extended further by adding a river component. The flow within the river channel has been added into the model as a 1D vector with bed elevation and width, the river flow vector consists of a hydro-graph of a high flow event. Return period analysis will be applied to the river peaks over threshold data and the example hydro-graph can then be tailored to the peak return period flow rate

  10. Seasonal and spatial diversity of microbial communities in marine sediments of the South China Sea.

    PubMed

    Du, Jikun; Xiao, Kai; Huang, Yali; Li, Huixian; Tan, Hongming; Cao, Lixiang; Lu, Yongjun; Zhou, Shining

    2011-10-01

    This study was conducted to characterize the diversity of microbial communities in marine sediments of the South China Sea by means of 16S rRNA gene clone libraries. The results revealed that the sediment samples collected in summer harboured a more diverse microbial community than that collected in winter, Deltaproteobacteria dominated 16S rRNA gene clone libraries from both seasons, followed by Gammaproteobacteria, Acidobacteria, Nitrospirae, Planctomycetes, Firmicutes. Archaea phylotypes were also found. The majority of clone sequences shared greatest similarity to uncultured organisms, mainly from hydrothermal sediments and cold seep sediments. In addition, the sedimentary microbial communities in the coastal sea appears to be much more diverse than that of the open sea. A spatial pattern in the sediment samples was observed that the sediment samples collected from the coastal sea and the open sea clustered separately, a novel microbial community dominated the open sea. The data indicate that changes in environmental conditions are accompanied by significant variations in diversity of microbial communities at the South China Sea.

  11. Skewed distribution of hypothyroidism in the coastal communities of Newfoundland, Canada.

    PubMed

    Sarkar, Atanu; Knight, John C; Babichuk, Nicole A; Mulay, Shree

    2015-10-01

    Several studies published in the recent past have shown that rising levels of thyroid disrupting chemicals (TDCs) in the environment affect thyroid function in humans. These TDCs are the anthropogenic organic compounds that enter the human body mostly by ingestion and may trigger autoimmune thyroiditis, the most common cause of hypothyroidism. The studies also show the presence of high levels of TDCs in marine animals; therefore, consumption of contaminated seafood might trigger hypothyroidism. So far, there is no readily available population-based data, showing the regional distribution of hypothyroidism cases. We collected administrative data from the Newfoundland and Labrador Centre for Health Information on hospitalizations with hypothyroidism (from 1998 to 2012) in 41 coastal communities of Newfoundland and found that mean hypothyroidism rates of west and south coasts were significantly higher than in the east coast (1.8 and 1.9 times respectively). A one-way analysis of variance was used to test for regional differences in rates. A significant between-group difference in the rate of hypothyroidism was found (F2,38 = 8.309; p = 0.001). The St. Lawrence River, its estuary and the Gulf of St. Lawrence are heavily polluted with TDCs from industries, their effluents, and urbanization in the Great Lakes Watershed and along the river. Environment Canada has already identified this river along with the Great Lakes Watershed as one of the top TDCs polluted water sources in the country. The west and south coasts are in contact with the Gulf of St. Lawrence. Local marine products are a regular diet of the coastal communities of Newfoundland. Based on these available evidence, we hypothesize the role of TDCs in the rise of hypothyroidism on the western and southern coasts. However, further study will be needed to establish any association between abnormally high rates of hypothyroidism and exposure to TDCs.

  12. Helminth communities in eels Anguilla anguilla from Adriatic coastal lagoons in Italy.

    PubMed

    Di Cave, D; Berrilli, F; De Liberato, C; Orecchia, P; Kennedy, C R

    2001-03-01

    The composition and diversity of the total and intestinal component and infra-communities were determined in eels Anguilla anguilla from three shallow lagoons on the Adriatic coast of Italy to determine whether the helminth communities would differ in composition and structure from those in eels from lagoons on the Tyrrhenian coast. The lagoons differed in respect of their management regimes and the extent of freshwater influx. Both freshwater and marine species of helminths were found in the eels in all three lagoons, but the freshwater component was richer in Valle Figheri. A suite of three digenean eel specialist species occurred in all three lagoons, of which any two members dominated each community. This conferred a high degree of similarity between the communities of the three lagoons. The same three species also dominated helminth communities in eels in lagoons along the Tyrrhenian coast of Italy, and compositional similarity levels were similar within and between western and eastern groups. Species richness was higher in the component communities of the eels of the Adriatic lagoons when compared to the Tyrrhenian ones, but diversity and dominance indices were of a similar order of magnitude and range. Intestinal helminth communities were richer and more diverse in two of the Adriatic lagoons because the proportion of eels with zero or one helminth species was, unusually, in the minority. It was nevertheless concluded that infracommunity structure was similar in eels from both western and eastern lagoons and that the hypothesis that it would differ in Adriatic lagoons could not be supported. The findings provide further evidence of the similarity in composition and structure of helminth communities in eels from coastal lagoons throughout Europe.

  13. An ecological approach supporting the management of sea-uses and natural capital in marine coastal areas

    NASA Astrophysics Data System (ADS)

    Marcelli, Marco; Carli, Filippo M.; Bonamano, Simone; Frattarelli, Francesco; Mancini, Emanuele; Paladini de Mendoza, Francesco; Peviani, Maximo; Piermattei, Viviana

    2015-04-01

    The purpose of our work is to create a multi-layer map of marine areas and adjacent territories (SeaUseMap), which takes into account both the different sea uses and the value of marine ecosystems, calculated on the basis of services and benefits produced by the different biocenosis. Marine coastal areas are characterized by the simultaneous presence of ecological conditions favorable to life and, at the same time, they are home to many human activities of particular economic relevance. Ecological processes occurring in coastal areas are particularly important and when we consider their contribution to the value of the "natural capital" (Costanza et Al. 1997, 2008, 2014), we can observe that this is often higher than the contribution from terrestrial ecosystems. Our work is done in northern Lazio (Civitavecchia), a highly populated area where many uses of the sea are superimposed: tourism, fisheries, industry, shipping and ports, historical and cultural heritage. Our goal is to create a tool to support decision-making, where ecosystem values and uses of the sea can be simultaneously represented. The ecosystem values are calculated based on an analysis of benthic biocoenoses: the basic ecological units that, in the Mediterranean Sea, have been identified, defined, analyzed and used since the 60s (Perez & Picard 1964) to date as a working tool (Boudouresque & Fresi 1976). Land surface, instead, was analyzed from available maps, produced within the Corine Land Cover project. Some application examples to support the decision-making are shown, with particular reference to the localization of suitable areas for wave energy production and the esteem of ecological damages generated in case of maritime accidents (e.g., Costa Concordia). According to Costanza 2008, we have developed our own operational method, which is suitable for this specific case of benefit assessment from benthic communities. In this framework, we base our strategy on the ability of the benthic

  14. Effects of Land Use Change on Tropical Coastal Systems are Exacerbated by the Decline of Marine Mega-Herbivores

    NASA Astrophysics Data System (ADS)

    Lamers, L. P.; Christianen, M. J.; Govers, L. L.; Kiswara, W.; Bouma, T.; Roelofs, J. G.; Van Katwijk, M. M.

    2011-12-01

    Land use changes in tropical regions such as deforestation, mining activities, and shrimp farming, not only affect freshwater and terrestrial ecosystems, but also have a strong impact on coastal marine ecosystems. The increased influx of sediments and nutrients affects these ecosystems in multiple ways. Seagrass meadows that line coastal marine ecosystems provide important ecosystem services, e.g. sediment trapping, coastal protection and fisheries. Based on studies in East Kalimantan (Indonesia) we have shown that seagrass meadow parameters may provide more reliable indicators of land use change than the sampling of either marine sediments or water quality chemical parameters. Observations of changes in ecosystem functioning are particularly valuable for those areas where flux values are lacking and rapid surveys are needed. Time series of estuarine seagrass transects can show not only the intensity, but also the radius of action of land use change on coastal marine systems. Marine mega-herbivores pose a strong top-down control in seagrass ecosystems. We will provide a conceptual model, based on experimental evidence, to show that the global decline of marine mega-herbivore populations (as a result of large-scale poaching) may decrease the resilience of seagrass systems to increased anthropogenic forcing including land use changes. These outcomes not only urge the need for better regulation of land use change, but also for the establishment of marine protected areas (MPA's) in tropical coastal regions.

  15. Sampling sufficiency for analyzing taxonomic relatedness of periphytic ciliate communities using an artificial substratum in coastal waters

    NASA Astrophysics Data System (ADS)

    Xu, Henglong; Zhang, Wei; Jiang, Yong; Zhu, Mingzhuang; Al-Rasheid, Khaled A. S.

    2012-08-01

    Taxonomic relatedness measures of ciliated protozoan communities have successively been used as useful indicators for assessing water quality in marine ecosystems with a number of desirable properties. Sampling sufficiency for analyzing taxonomic relatedness indices of periphytic ciliate communities was studied in coastal waters of the Yellow Sea, northern China, from May to June, 2010. Samples were collected at two depths of 1 m and 3 m using an artificial substratum (glass slides), and were analyzed based on different sampling strategies (slide replicates). For achieving a dissimilarity of < 10%, more slide replicates were required with shortening community ages: 3-10 slide replicates were sufficient for the young (1-7 days) communities while 2-4 slide replicates were for the mature (10-28 days). The standard errors of four taxonomic relatedness indices due to the sample sizes were increased only in the young communities with shortening colonization times. For achieving a standard error of < 10%, 1 slide replicate was generally sufficient for the mature communities, whereas 4-10 were required for the young. These findings suggested that low slide replicates were required for measuring taxonomic relatedness indices compared to analyzing the community patterns, and that these indices were more sensitive to the sample sizes of a young community than a mature one of periphytic ciliates in marine ecosystems.

  16. Documenting the density of subtidal marine debris across multiple marine and coastal habitats.

    PubMed

    Smith, Stephen D A; Edgar, Robert J

    2014-01-01

    Marine debris is recognised globally as a key threatening process to marine life, but efforts to address the issue are hampered by the lack of data for many marine habitats. By developing standardised protocols and providing training in their application, we worked with >300 volunteer divers from 11 underwater research groups to document the scale of the subtidal marine debris problem at 120 sites across >1000 km of the coast of NSW, Australia. Sampling consisted of replicated 25×5 m transects in which all debris was identified, counted, and, where appropriate, removed. Sites ranged from estuarine settings adjacent to major population centres, to offshore islands within marine parks. Estuaries and embayments were consistently found to be the most contaminated habitats. Fishing-related items (and especially monofilament and braided fishing line) were most prevalent at the majority of sites, although food and drink items were important contributors at sites adjacent to population centres. The results identified damaging interactions between marine debris and marine biota at some key locations, highlighting the need for management intervention to ensure habitat sustainability. This study reinforces the important contribution that volunteers can make to assessing conservation issues requiring broad-scale data collection. In this case, citizen scientists delivered data that will inform, and help to prioritise, management approaches at both statewide and local scales. These initial data also provide an important baseline for longer-term, volunteer-based monitoring programs.

  17. Documenting the density of subtidal marine debris across multiple marine and coastal habitats.

    PubMed

    Smith, Stephen D A; Edgar, Robert J

    2014-01-01

    Marine debris is recognised globally as a key threatening process to marine life, but efforts to address the issue are hampered by the lack of data for many marine habitats. By developing standardised protocols and providing training in their application, we worked with >300 volunteer divers from 11 underwater research groups to document the scale of the subtidal marine debris problem at 120 sites across >1000 km of the coast of NSW, Australia. Sampling consisted of replicated 25×5 m transects in which all debris was identified, counted, and, where appropriate, removed. Sites ranged from estuarine settings adjacent to major population centres, to offshore islands within marine parks. Estuaries and embayments were consistently found to be the most contaminated habitats. Fishing-related items (and especially monofilament and braided fishing line) were most prevalent at the majority of sites, although food and drink items were important contributors at sites adjacent to population centres. The results identified damaging interactions between marine debris and marine biota at some key locations, highlighting the need for management intervention to ensure habitat sustainability. This study reinforces the important contribution that volunteers can make to assessing conservation issues requiring broad-scale data collection. In this case, citizen scientists delivered data that will inform, and help to prioritise, management approaches at both statewide and local scales. These initial data also provide an important baseline for longer-term, volunteer-based monitoring programs. PMID:24743690

  18. Documenting the Density of Subtidal Marine Debris across Multiple Marine and Coastal Habitats

    PubMed Central

    Smith, Stephen D. A.; Edgar, Robert J.

    2014-01-01

    Marine debris is recognised globally as a key threatening process to marine life, but efforts to address the issue are hampered by the lack of data for many marine habitats. By developing standardised protocols and providing training in their application, we worked with >300 volunteer divers from 11 underwater research groups to document the scale of the subtidal marine debris problem at 120 sites across >1000 km of the coast of NSW, Australia. Sampling consisted of replicated 25×5 m transects in which all debris was identified, counted, and, where appropriate, removed. Sites ranged from estuarine settings adjacent to major population centres, to offshore islands within marine parks. Estuaries and embayments were consistently found to be the most contaminated habitats. Fishing-related items (and especially monofilament and braided fishing line) were most prevalent at the majority of sites, although food and drink items were important contributors at sites adjacent to population centres. The results identified damaging interactions between marine debris and marine biota at some key locations, highlighting the need for management intervention to ensure habitat sustainability. This study reinforces the important contribution that volunteers can make to assessing conservation issues requiring broad-scale data collection. In this case, citizen scientists delivered data that will inform, and help to prioritise, management approaches at both statewide and local scales. These initial data also provide an important baseline for longer-term, volunteer-based monitoring programs. PMID:24743690

  19. Proteomic-based stable isotope probing reveals taxonomically Distinct Patterns in Amino Acid Assimilation by Coastal Marine Bacterioplankton

    DOE PAGES

    Bryson, Samuel; Li, Zhou; Pett-Ridge, Jennifer; Robert L. Hettich; Mayali, Xavier; Pan, Chongle; Mueller, Ryan S.

    2016-04-26

    Heterotrophic marine bacterioplankton are a critical component of the carbon cycle, processing nearly a quarter of annual global primary production, yet defining how substrate utilization preferences and resource partitioning structure these microbial communities remains a challenge. In this study, we utilized proteomics-based stable isotope probing (proteomic SIP) to characterize the assimilation of amino acids by coastal marine bacterioplankton populations. We incubated microcosms of seawater collected from Newport, OR and Monterey Bay, CA with 1 M 13C-amino acids for 15 and 32 hours. Subsequent analysis of 13C incorporation into protein biomass quantified the frequency and extent of isotope enrichment for identifiedmore » proteins. Using these metrics we tested whether amino acid assimilation patterns were different for specific bacterioplankton populations. Proteins associated with Rhodobacterales and Alteromonadales tended to have a significantly high number of tandem mass spectra from 13C-enriched peptides, while Flavobacteriales and SAR11 proteins generally had significantly low numbers of 13C-enriched spectra. Rhodobacterales proteins associated with amino acid transport and metabolism had an increased frequency of 13C-enriched spectra at time-point 2, while Alteromonadales ribosomal proteins were 13C- enriched across time-points. Overall, proteomic SIP facilitated quantitative comparisons of dissolved free amino acids assimilation by specific taxa, both between sympatric populations and between protein functional groups within discrete populations, allowing an unprecedented examination of population-level metabolic responses to resource acquisition in complex microbial communities.« less

  20. Spatial distribution of fallout 137Cs in the coastal marine environment of India.

    PubMed

    Jha, S K; Gothankar, S S; Sartandel, S; Pote, M B; Hemalatha, P; Rajan, M P; Vidyasagar, D; Indumati, S P; Shrivastava, R; Puranik, V D

    2012-11-01

    The data on the fallout (137)Cs in the coastal marine environment assume significance in view of massive expansion of nuclear power plants in the Asia-Pacific region and to fulfill the benchmark study required to evaluate the possible impact of the Fukushima radioactive releases in the Asia-Pacific region. Measurements of (137)Cs in sea water, along with salinity and temperature, were carried out at 30 locations covering the coastal area of the Arabian Sea and the Bay of Bengal. For the present study the Indian coastal area is divided in three different regions. The (137)Cs concentration in sea water of the entire Indian coastal region varies from 0.30 to 1.25 Bq m(-3). The data obtained in the present study was compared with the North Indian Ocean data and it was observed that there is a 33% decrease in the Arabian Sea (region I), 50% in the high rainfall coastal area (region II) and 24% in the Bay of Bengal (region III).

  1. Ecological succession reveals potential signatures of marine-terrestrial transition in salt marsh fungal communities.

    PubMed

    Dini-Andreote, Francisco; Pylro, Victor Satler; Baldrian, Petr; van Elsas, Jan Dirk; Salles, Joana Falcão

    2016-08-01

    Marine-to-terrestrial transition represents one of the most fundamental shifts in microbial life. Understanding the distribution and drivers of soil microbial communities across coastal ecosystems is critical given the roles of microbes in soil biogeochemistry and their multifaceted influence on landscape succession. Here, we studied the fungal community dynamics in a well-established salt marsh chronosequence that spans over a century of ecosystem development. We focussed on providing high-resolution assessments of community composition, diversity and ecophysiological shifts that yielded patterns of ecological succession through soil formation. Notably, despite containing 10- to 100-fold lower fungal internal transcribed spacer abundances, early-successional sites revealed fungal richnesses comparable to those of more mature soils. These newly formed sites also exhibited significant temporal variations in β-diversity that may be attributed to the highly dynamic nature of the system imposed by the tidal regime. The fungal community compositions and ecophysiological assignments changed substantially along the successional gradient, revealing a clear signature of ecological replacement and gradually transforming the environment from a marine into a terrestrial system. Moreover, distance-based linear modelling revealed soil physical structure and organic matter to be the best predictors of the shifts in fungal β-diversity along the chronosequence. Taken together, our study lays the basis for a better understanding of the spatiotemporally determined fungal community dynamics in salt marshes and highlights their ecophysiological traits and adaptation in an evolving ecosystem. PMID:26824176

  2. Heavy metals in molluscan, crustacean, and other commercially important Chilean marine coastal water species

    SciTech Connect

    Ober, A.G.; Gonzalez, M.; Santa Maria, I.

    1987-03-01

    The work reported here is part of a general program to monitor the marine chemical pollution along the Chilean coast. The present investigation was designated to provide information on the nature and levels of the heavy metals present in the marine species commonly consumed by the population, and to learn whether these levels may constitute a hazard to consumers. The authors report here the typical contents of 10 heavy metals in 12 commercially significant marine species from the Chilean coastal waters (Valparaiso, Concepcion and Puerto Montt). The analyzed species included 7 molluscs, 3 curstacea, and 2 other shellfish species of wide consumption. The metals chosen for analysis were copper, zinc, cadmium, lead, mercury, nickel, antimony, selenium, iron and chromium.

  3. Optimal management of a Hawaiian Coastal aquifer with nearshore marine ecological interactions

    NASA Astrophysics Data System (ADS)

    Duarte, Thomas Kaeo; Pongkijvorasin, Sittidaj; Roumasset, James; Amato, Daniel; Burnett, Kimberly

    2010-11-01

    We optimize groundwater management in the presence of marine consequences of submarine groundwater discharge (SGD). Concern for marine biota increases the optimal steady-state head level of the aquifer. The model is discussed in general terms for any coastal groundwater resource where SGD has a positive impact on valuable nearshore resources. Our application focuses on the Kona Coast of Hawai`i, where SGD is being actively studied and where both nearshore ecology and groundwater resources are serious sociopolitical issues. To incorporate the consequences of water extraction on nearshore resources, we impose a safe minimum standard for the quantity of SGD. Efficient pumping rates fluctuate according to various growth requirements on the keystone marine algae and different assumptions regarding recharge rates. Desalination is required under average recharge conditions and a strict minimum standard and under low recharge conditions regardless of minimum standards of growth.

  4. Environmental contamination and marine mammals in coastal waters from Argentina: an overview.

    PubMed

    Marcovecchio, J E; Gerpe, M S; Bastida, R O; Rodríguez, D H; Morón, S G

    1994-09-16

    Environmental contamination become an increasing global problem. Different scientific strategies have been developed in order to assess the impact of pollutants on marine ecosystems. The distribution of toxic contaminants in tissues of different marine mammal species--both cetaceans and pinnipeds--has been studied in many ecosystems, as well as several related ecological processes, like pollutant accumulation or transfer through the food web. A research program directed towards evaluating the occurrence of pollutants in marine mammals from the coastal waters of Argentina (southwestern Atlantic Ocean) has been developed since 1985, and includes the study of heavy metal contents in stranded or incidentally caught animals. The marine mammal species studied during this period were: the seals Otaria flavescens and Arctocephalus australis, and small cetaceans Tursiops gephyreus, Pontoporia blainvillei, Kogia breviceps and Ziphius cavirostris. In most of the cases, high contents of heavy metals (total mercury, cadmium, zinc, and copper) have been recorded. Moreover, liver showed the maximum capability for accumulation of heavy metals in all studied species. The biological and ecological characteristics of each species of the above-mentioned marine mammals (feeding habits, age, migratory pathways, or sex) contributed to the understanding of the metal sources. Considering the results as obtained during the study period it can be assumed that: (1) The global distribution of toxic contaminants also affects the southwestern Atlantic Ocean ecosystems, and (2) Marine mammals could be appropriate bioindicator species in order to assess this kind of environmental problem. PMID:7973603

  5. Environmental contamination and marine mammals in coastal waters from Argentina: an overview.

    PubMed

    Marcovecchio, J E; Gerpe, M S; Bastida, R O; Rodríguez, D H; Morón, S G

    1994-09-16

    Environmental contamination become an increasing global problem. Different scientific strategies have been developed in order to assess the impact of pollutants on marine ecosystems. The distribution of toxic contaminants in tissues of different marine mammal species--both cetaceans and pinnipeds--has been studied in many ecosystems, as well as several related ecological processes, like pollutant accumulation or transfer through the food web. A research program directed towards evaluating the occurrence of pollutants in marine mammals from the coastal waters of Argentina (southwestern Atlantic Ocean) has been developed since 1985, and includes the study of heavy metal contents in stranded or incidentally caught animals. The marine mammal species studied during this period were: the seals Otaria flavescens and Arctocephalus australis, and small cetaceans Tursiops gephyreus, Pontoporia blainvillei, Kogia breviceps and Ziphius cavirostris. In most of the cases, high contents of heavy metals (total mercury, cadmium, zinc, and copper) have been recorded. Moreover, liver showed the maximum capability for accumulation of heavy metals in all studied species. The biological and ecological characteristics of each species of the above-mentioned marine mammals (feeding habits, age, migratory pathways, or sex) contributed to the understanding of the metal sources. Considering the results as obtained during the study period it can be assumed that: (1) The global distribution of toxic contaminants also affects the southwestern Atlantic Ocean ecosystems, and (2) Marine mammals could be appropriate bioindicator species in order to assess this kind of environmental problem.

  6. The RITMARE coastal radar network and applications to monitor marine transport infrastructures

    NASA Astrophysics Data System (ADS)

    Carrara, Paola; Corgnati, Lorenzo; Cosoli, Simone; Griffa, Annalisa; Kalampokis, Alkiviadis; Mantovani, Carlo; Oggioni, Alessandro; Pepe, Monica; Raffa, Francesco; Serafino, Francesco; Uttieri, Marco; Zambianchi, Enrico

    2014-05-01

    Coastal radars provide information on the environmental state of oceans, namely maps of surface currents at time intervals of the order of one hour with spatial coverage of the order of several km, depending on the transmission frequency. The observations are of crucial importance for monitoring ports and ship tracks close to the coast, providing support for safe navigation in densely operated areas and fast response in case of accidents at sea, such as oil spill or search and rescue. Besides these applications, coastal radar observations provide fundamental support in MPAs surveillance, connectivity and marine population circulation. In the framework of the Italian RITMARE flagship project coordinated by CNR (Consiglio Nazionale delle Ricerche), a coastal radar network has been designed and implemented with a number of innovative characteristics. The network includes both HF and X-band radars, allowing coverage of wide areas with different spatial and temporal resolutions. HF radars cover up to 80 km with a spatial resolution ranging between 1 and 5 km, while X-band radars provide 5 km coverage with a spatial resolution of 10 m. Joining these two capabilities, the RITMARE coastal radar network enables both a highly effective coverage of wide coastal areas and integrated monitoring of different phenomena, thus allowing the collection of current and wave parameters and detection of bathymetries of both open sea and coastal areas. A dedicated action to foster interoperability among data providers has been undertaken within RITMARE; an IT framework is under development to provide software tools for data collection and data sharing. It suggests standard, data format definitions, Quality Control strategies, data management and dissemination policies. In particular, the implementation of tools exploits both standards of OGC (Open Geospatial Consortium) and web services offered to manage, access and deliver geospatial data. Radar data produced in RITMARE by the coastal

  7. Integrated coastal management: top-down vs. community-based approaches.

    PubMed

    Zagonari, Fabio

    2008-09-01

    In this paper, a dynamic model is developed in which coastal quality can be improved, restored, or maintained by two distinct user groups; this is done by identifying a context that ensures an increase (or a greater increase) in coastal quality in terms of specific features that characterise the user groups. The results demonstrate that integrated coastal management is always better than non-integrated management. Moreover, when there is a low degree of interest in maintaining the coastal use over time, only integrated community-based (CB) coastal management will increase the coastal quality. Even when the interest in maintaining the coastal use over time is high, an integrated CB approach is preferred if the willingness to pay for coastal improvements is great and the marginal inefficiency of investments in coastal improvements is low, because the coastal quality improves to a greater extent; if not, only an integrated top-down (TD) approach to coastal management will increase the coastal quality. These results suggest that developing countries should always adopt a CB approach; in contrast, developed countries should adopt a CB approach where local stakeholders attach direct values to the coastal quality, and adopt a TD approach where the general population attaches indirect (option or existence) values to coastal quality.

  8. Accumulation of radionuclides in selected marine biota from Manjung coastal area

    SciTech Connect

    Abdullah, Anisa Hamzah, Zaini; Wood, Ab. Khalik; Saat, Ahmad; Alias, Masitah

    2015-04-29

    Distribution of radionuclides from anthropogenic activities has been intensively studied due to the accumulation of radionuclides in marine ecosystem. Manjung area is affected by rapid population growth and socio-economic development such as heavy industrial activities including coal fired power plant, iron foundries, port development and factories, agricultural runoff, waste and toxic discharge from factories.It has radiological risk and toxic effect when effluent from the industries in the area containing radioactive materials either being transported to the atmosphere and deposited back over the land or by run off to the river and flow into coastal area and being absorbed by marine biota. Radionuclides presence in the marine ecosystem can be adversely affect human health when it enters the food chain. This study is focusing on the radionuclides [thorium (Th), uranium (U), radium-226 ({sup 226}Ra), radium-228 ({sup 228}Ra) and potassium-40 ({sup 40}K)] content in marine biota and sea water from Manjung coastal area. Five species of marine biota including Johnius dussumieri (Ikan Gelama), Pseudorhombus malayanus (Ikan Sebelah), Arius maculatus (Ikan Duri), Portunus pelagicus (Ketam Renjong) and Charybdis natator (Ketam Salib) were collected during rainy and dry seasons. Measurements were carried out using Inductively Coupled Plasma Mass Spectrometer (ICPMS). The results show that the concentration of radionuclides varies depends on ecological environment of respective marine biota species. The concentrations and activity concentrations are used for the assessment of potential internal hazard index (H{sub in}), transfer factor (TF), ingestion dose rate (D) and health risk index (HRI) to monitor radiological risk for human consumption.

  9. Life in the "plastisphere": microbial communities on plastic marine debris.

    PubMed

    Zettler, Erik R; Mincer, Tracy J; Amaral-Zettler, Linda A

    2013-07-01

    Plastics are the most abundant form of marine debris, with global production rising and documented impacts in some marine environments, but the influence of plastic on open ocean ecosystems is poorly understood, particularly for microbial communities. Plastic marine debris (PMD) collected at multiple locations in the North Atlantic was analyzed with scanning electron microscopy (SEM) and next-generation sequencing to characterize the attached microbial communities. We unveiled a diverse microbial community of heterotrophs, autotrophs, predators, and symbionts, a community we refer to as the "Plastisphere". Pits visualized in the PMD surface conformed to bacterial shapes suggesting active hydrolysis of the hydrocarbon polymer. Small-subunit rRNA gene surveys identified several hydrocarbon-degrading bacteria, supporting the possibility that microbes play a role in degrading PMD. Some Plastisphere members may be opportunistic pathogens (the authors, unpublished data) such as specific members of the genus Vibrio that dominated one of our plastic samples. Plastisphere communities are distinct from surrounding surface water, implying that plastic serves as a novel ecological habitat in the open ocean. Plastic has a longer half-life than most natural floating marine substrates, and a hydrophobic surface that promotes microbial colonization and biofilm formation, differing from autochthonous substrates in the upper layers of the ocean. PMID:23745679

  10. North Carolina Marine Education Manual. Connections: Guide to Marine Resources, Living Marine Systems and Coastal Field Trips.

    ERIC Educational Resources Information Center

    Spence, L.; Medlicott, J.

    This collection of teaching and resource materials is designed to help middle school teachers put marine perspectives into their lessons. Materials are organized into three parts. Part 1 describes the preparation and maintenance of brackish water aquariums, marine aquariums, and touch tanks. Activities related to and sources of information on…

  11. Multiple stressors, nonlinear effects and the implications of climate change impacts on marine coastal ecosystems.

    PubMed

    Hewitt, Judi E; Ellis, Joanne I; Thrush, Simon F

    2016-08-01

    Global climate change will undoubtedly be a pressure on coastal marine ecosystems, affecting not only species distributions and physiology but also ecosystem functioning. In the coastal zone, the environmental variables that may drive ecological responses to climate change include temperature, wave energy, upwelling events and freshwater inputs, and all act and interact at a variety of spatial and temporal scales. To date, we have a poor understanding of how climate-related environmental changes may affect coastal marine ecosystems or which environmental variables are likely to produce priority effects. Here we use time series data (17 years) of coastal benthic macrofauna to investigate responses to a range of climate-influenced variables including sea-surface temperature, southern oscillation indices (SOI, Z4), wind-wave exposure, freshwater inputs and rainfall. We investigate responses from the abundances of individual species to abundances of functional traits and test whether species that are near the edge of their tolerance to another stressor (in this case sedimentation) may exhibit stronger responses. The responses we observed were all nonlinear and some exhibited thresholds. While temperature was most frequently an important predictor, wave exposure and ENSO-related variables were also frequently important and most ecological variables responded to interactions between environmental variables. There were also indications that species sensitive to another stressor responded more strongly to weaker climate-related environmental change at the stressed site than the unstressed site. The observed interactions between climate variables, effects on key species or functional traits, and synergistic effects of additional anthropogenic stressors have important implications for understanding and predicting the ecological consequences of climate change to coastal ecosystems.

  12. Assessment of marine debris in beaches or seawaters around the China Seas and coastal provinces.

    PubMed

    Zhou, Changchun; Liu, Xu; Wang, Zhengwen; Yang, Tiantian; Shi, Linna; Wang, Linlin; You, Suwen; Li, Min; Zhang, Cuicui

    2016-02-01

    Compared with United States of America (USA), Brazil, Chile, Australia, limited attention has been paid to marine debris research in China and few studies have attempted to quantify the abundance and mass of marine debris. In this study, firstly the general status and sources of marine debris in China were assessed in the time period between 2007 and 2014, and secondly marine debris situation was evaluated in three China Sea Areas (the North China Sea, the East China Sea and the South China Sea) from 2009 to 2013, and finally marine debris conditions and sources were analyzed in beaches or seawaters around some coastal provinces of China during 2007-2013. Based on above analysis, the primary conclusions were as follows: (1) The mean number and weight densities of beached marine debris (BMD) and submerged marine debris (SMD) were 4.30, 0.13items/100m(2) and 133.80, 22.60g/100m(2) in China from 2007 to 2014, respectively. The average number density of the large size FMD (LOSFMD) was 0.0024items/100m(2) and that of the small and medium size FMD (SMSFMD) was 0.30items/100m(2), and the mean weight density of the SMSFMD was 1.40g/100m(2) from 2008 to 2014. The SMD and FMD densities were at the low level and the BMD density was at the high level in China. (2) The marine debris primarily was comprised of plastic, Styrofoam, wood, glass, rubber, fabric/fiber and metal, which included almost all major categories of marine debris. (3) Sources of BMD and FMD were as follows: the first source was coastal/recreational activities, followed by other disposal sources, navigation/fishing activities and the activities related smoking, and the least source being those associated with medical/sanitary activities, while the source of SMD remained unknown. (4) The mean number and weight densities of BMD were the biggest in the North China Sea, while those of FMD and SMD were the highest in the northern South China Sea. The results of this study were beneficial to the establishment of

  13. Assessment of marine debris in beaches or seawaters around the China Seas and coastal provinces.

    PubMed

    Zhou, Changchun; Liu, Xu; Wang, Zhengwen; Yang, Tiantian; Shi, Linna; Wang, Linlin; You, Suwen; Li, Min; Zhang, Cuicui

    2016-02-01

    Compared with United States of America (USA), Brazil, Chile, Australia, limited attention has been paid to marine debris research in China and few studies have attempted to quantify the abundance and mass of marine debris. In this study, firstly the general status and sources of marine debris in China were assessed in the time period between 2007 and 2014, and secondly marine debris situation was evaluated in three China Sea Areas (the North China Sea, the East China Sea and the South China Sea) from 2009 to 2013, and finally marine debris conditions and sources were analyzed in beaches or seawaters around some coastal provinces of China during 2007-2013. Based on above analysis, the primary conclusions were as follows: (1) The mean number and weight densities of beached marine debris (BMD) and submerged marine debris (SMD) were 4.30, 0.13items/100m(2) and 133.80, 22.60g/100m(2) in China from 2007 to 2014, respectively. The average number density of the large size FMD (LOSFMD) was 0.0024items/100m(2) and that of the small and medium size FMD (SMSFMD) was 0.30items/100m(2), and the mean weight density of the SMSFMD was 1.40g/100m(2) from 2008 to 2014. The SMD and FMD densities were at the low level and the BMD density was at the high level in China. (2) The marine debris primarily was comprised of plastic, Styrofoam, wood, glass, rubber, fabric/fiber and metal, which included almost all major categories of marine debris. (3) Sources of BMD and FMD were as follows: the first source was coastal/recreational activities, followed by other disposal sources, navigation/fishing activities and the activities related smoking, and the least source being those associated with medical/sanitary activities, while the source of SMD remained unknown. (4) The mean number and weight densities of BMD were the biggest in the North China Sea, while those of FMD and SMD were the highest in the northern South China Sea. The results of this study were beneficial to the establishment of

  14. Downscaling and extrapolating dynamic seasonal marine forecasts for coastal ocean users

    NASA Astrophysics Data System (ADS)

    Vanhatalo, Jarno; Hobday, Alistair J.; Little, L. Richard; Spillman, Claire M.

    2016-04-01

    Marine weather and climate forecasts are essential in planning strategies and activities on a range of temporal and spatial scales. However, seasonal dynamical forecast models, that provide forecasts in monthly scale, often have low offshore resolution and limited information for inshore coastal areas. Hence, there is increasing demand for methods capable of fine scale seasonal forecasts covering coastal waters. Here, we have developed a method to combine observational data with dynamical forecasts from POAMA (Predictive Ocean Atmosphere Model for Australia; Australian Bureau of Meteorology) in order to produce seasonal downscaled, corrected forecasts, extrapolated to include inshore regions that POAMA does not cover. We demonstrate the method in forecasting the monthly sea surface temperature anomalies in the Great Australian Bight (GAB) region. The resolution of POAMA in the GAB is approximately 2° × 1° (lon. × lat.) and the resolution of our downscaled forecast is approximately 1° × 0.25°. We use data and model hindcasts for the period 1994-2010 for forecast validation. The predictive performance of our statistical downscaling model improves on the original POAMA forecast. Additionally, this statistical downscaling model extrapolates forecasts to coastal regions not covered by POAMA and its forecasts are probabilistic which allows straightforward assessment of uncertainty in downscaling and prediction. A range of marine users will benefit from access to downscaled and nearshore forecasts at seasonal timescales.

  15. State of knowledge of coastal and marine biodiversity of Indian Ocean countries.

    PubMed

    Wafar, Mohideen; Venkataraman, Krishnamurthy; Ingole, Baban; Ajmal Khan, Syed; Lokabharathi, Ponnapakkam

    2011-01-01

    The Indian Ocean (IO) extends over 30% of the global ocean area and is rimmed by 36 littoral and 11 hinterland nations sustaining about 30% of the world's population. The landlocked character of the ocean along its northern boundary and the resultant seasonally reversing wind and sea surface circulation patterns are features unique to the IO. The IO also accounts for 30% of the global coral reef cover, 40,000 km² of mangroves,some of the world's largest estuaries, and 9 large marine ecosystems. Numerous expeditions and institutional efforts in the last two centuries have contributed greatly to our knowledge of coastal and marine biodiversity within the IO. The current inventory, as seen from the Ocean Biogeographic Information System, stands at 34,989 species, but the status of knowledge is not uniform among countries. Lack of human, institutional, and technical capabilities in some IO countries is the main cause for the heterogeneous level of growth in our understanding of the biodiversity of the IO. The gaps in knowledge extend to several smaller taxa and to large parts of the shelf and deep-sea ecosystems, including seamounts. Habitat loss, uncontrolled developmental activities in the coastal zone, over extraction of resources, and coastal pollution are serious constraints on maintenance of highly diverse biota, especially in countries like those of the IO, where environmental regulations are weak. PMID:21297949

  16. State of knowledge of coastal and marine biodiversity of Indian Ocean countries.

    PubMed

    Wafar, Mohideen; Venkataraman, Krishnamurthy; Ingole, Baban; Ajmal Khan, Syed; Lokabharathi, Ponnapakkam

    2011-01-31

    The Indian Ocean (IO) extends over 30% of the global ocean area and is rimmed by 36 littoral and 11 hinterland nations sustaining about 30% of the world's population. The landlocked character of the ocean along its northern boundary and the resultant seasonally reversing wind and sea surface circulation patterns are features unique to the IO. The IO also accounts for 30% of the global coral reef cover, 40,000 km² of mangroves,some of the world's largest estuaries, and 9 large marine ecosystems. Numerous expeditions and institutional efforts in the last two centuries have contributed greatly to our knowledge of coastal and marine biodiversity within the IO. The current inventory, as seen from the Ocean Biogeographic Information System, stands at 34,989 species, but the status of knowledge is not uniform among countries. Lack of human, institutional, and technical capabilities in some IO countries is the main cause for the heterogeneous level of growth in our understanding of the biodiversity of the IO. The gaps in knowledge extend to several smaller taxa and to large parts of the shelf and deep-sea ecosystems, including seamounts. Habitat loss, uncontrolled developmental activities in the coastal zone, over extraction of resources, and coastal pollution are serious constraints on maintenance of highly diverse biota, especially in countries like those of the IO, where environmental regulations are weak.

  17. The sociological perspective in coastal management and geoengineering approach: effects of hydraulic structures on the resilience of fishing communities (NW Portugal)

    NASA Astrophysics Data System (ADS)

    Rocha, Fernando; Pires, Ana; Chamine, Helder

    2014-05-01

    The coast plays an important role in global transportation and is the most popular tourist destination around the world. During the years coastal scientists "walking on the shore", have tried to understand the shoreline in relation to the processes that shape it, and its interrelationships with the contiguous superficial marine and terrestrial hinterland environments. Those factors encourage the need for Integrated Coastal Zone Management (ICZM), because of its possible use in identifying coastal management issues to take into account in policy strategies, measures and planning. Therefore this research presents an integrated strategy and a holistic approach to researching and studying coastal areas involving a wide number of sciences including sociology. Because of the numerous types of hazards in coastal areas the only possible response involves a holistic, integrated and long term approach. Combining marine sociological research, resilience and flexibility of a particular coastal community with other scientific fields will help to understand and manage marine social problems. This study also shows an integrative and "eclectic" methodology and adapts it to coastal management. Hence a new integrated coastal geoengineering approach for maritime environments was proposed, which is the core foundation of this approach. Also it was important to incorporate in a broader sense coastal geosciences and geoengineering GIS mapping to this final equation resulting in conceptual models. In Portugal there are several areas buffeted by sea invasions, coastal erosion and severe storms. The Portuguese coastal zone is one of Europe's most vulnerable regarding coastal erosion. The case study presented herein is an example of one of the most vulnerable sites in Portugal in terms of coastal erosion and sea invasions and how the meeting of local fishing community and coastal projects are extremely important. The coastal stretch between Figueira da Foz and Espinho (Centre and NW

  18. Measuring disaster-resilient communities: a case study of coastal communities in Indonesia.

    PubMed

    Kafle, Shesh Kanta

    2012-01-01

    Vulnerability reduction and resilience building of communities are central concepts in recent policy debates. Although there are fundamental linkages, and complementarities exist between the two concepts, recent policy and programming has focused more on the latter. It is assumed here that reducing underlying causes of vulnerabilities and their interactions with resilience elements is a prerequisite for obtaining resilience capabilities. An integrated approach, incorporating both the vulnerability and resilience considerations, has been taken while developing an index for measuring disaster-resilient communities. This study outlines a method for measuring community resilience capabilities using process and outcome indicators in 43 coastal communities in Indonesia. An index was developed using ten process and 25 outcome indicators, selected on the basis of the ten steps of the Integrated Community Based Risk Reduction (ICBRR) process, and key characteristics of disaster resilient communities were taken from various literatures. The overall index value of all 43 communities was 63, whereas the process and outcome indicator values were measured as 63 and 61.5 respectively. The core components of this index are process and outcome indicators. The tool has been developed with an assumption that both the process and outcome indicators are equally important in building disaster-resilient communities. The combination of both indicators is an impetus to quality change in the community. Process indicators are important for community understanding, ownership and the sustainability of the programme; whereas outcome indicators are important for the real achievements in terms of community empowerment and capacity development. The process of ICBRR approach varies by country and location as per the level of community awareness and organisational strategy. However, core elements such as the formation of community groups, mobilising those groups in risk assessment and planning

  19. Measuring disaster-resilient communities: a case study of coastal communities in Indonesia.

    PubMed

    Kafle, Shesh Kanta

    2012-01-01

    Vulnerability reduction and resilience building of communities are central concepts in recent policy debates. Although there are fundamental linkages, and complementarities exist between the two concepts, recent policy and programming has focused more on the latter. It is assumed here that reducing underlying causes of vulnerabilities and their interactions with resilience elements is a prerequisite for obtaining resilience capabilities. An integrated approach, incorporating both the vulnerability and resilience considerations, has been taken while developing an index for measuring disaster-resilient communities. This study outlines a method for measuring community resilience capabilities using process and outcome indicators in 43 coastal communities in Indonesia. An index was developed using ten process and 25 outcome indicators, selected on the basis of the ten steps of the Integrated Community Based Risk Reduction (ICBRR) process, and key characteristics of disaster resilient communities were taken from various literatures. The overall index value of all 43 communities was 63, whereas the process and outcome indicator values were measured as 63 and 61.5 respectively. The core components of this index are process and outcome indicators. The tool has been developed with an assumption that both the process and outcome indicators are equally important in building disaster-resilient communities. The combination of both indicators is an impetus to quality change in the community. Process indicators are important for community understanding, ownership and the sustainability of the programme; whereas outcome indicators are important for the real achievements in terms of community empowerment and capacity development. The process of ICBRR approach varies by country and location as per the level of community awareness and organisational strategy. However, core elements such as the formation of community groups, mobilising those groups in risk assessment and planning

  20. Temporal Stability of the Microbial Community in Sewage-Polluted Seawater Exposed to Natural Sunlight Cycles and Marine Microbiota

    PubMed Central

    Sassoubre, Lauren M.; Yamahara, Kevan M.

    2015-01-01

    Billions of gallons of untreated wastewater enter the coastal ocean each year. Once sewage microorganisms are in the marine environment, they are exposed to environmental stressors, such as sunlight and predation. Previous research has investigated the fate of individual sewage microorganisms in seawater but not the entire sewage microbial community. The present study used next-generation sequencing (NGS) to examine how the microbial community in sewage-impacted seawater changes over 48 h when exposed to natural sunlight cycles and marine microbiota. We compared the results from microcosms composed of unfiltered seawater (containing naturally occurring marine microbiota) and filtered seawater (containing no marine microbiota) to investigate the effect of marine microbiota. We also compared the results from microcosms that were exposed to natural sunlight cycles with those from microcosms kept in the dark to investigate the effect of sunlight. The microbial community composition and the relative abundance of operational taxonomic units (OTUs) changed over 48 h in all microcosms. Exposure to sunlight had a significant effect on both community composition and OTU abundance. The effect of marine microbiota, however, was minimal. The proportion of sewage-derived microorganisms present in the microcosms decreased rapidly within 48 h, and the decrease was the most pronounced in the presence of both sunlight and marine microbiota, where the proportion decreased from 85% to 3% of the total microbial community. The results from this study demonstrate the strong effect that sunlight has on microbial community composition, as measured by NGS, and the importance of considering temporal effects in future applications of NGS to identify microbial pollution sources. PMID:25576619

  1. Temporal stability of the microbial community in sewage-polluted seawater exposed to natural sunlight cycles and marine microbiota.

    PubMed

    Sassoubre, Lauren M; Yamahara, Kevan M; Boehm, Alexandria B

    2015-03-01

    Billions of gallons of untreated wastewater enter the coastal ocean each year. Once sewage microorganisms are in the marine environment, they are exposed to environmental stressors, such as sunlight and predation. Previous research has investigated the fate of individual sewage microorganisms in seawater but not the entire sewage microbial community. The present study used next-generation sequencing (NGS) to examine how the microbial community in sewage-impacted seawater changes over 48 h when exposed to natural sunlight cycles and marine microbiota. We compared the results from microcosms composed of unfiltered seawater (containing naturally occurring marine microbiota) and filtered seawater (containing no marine microbiota) to investigate the effect of marine microbiota. We also compared the results from microcosms that were exposed to natural sunlight cycles with those from microcosms kept in the dark to investigate the effect of sunlight. The microbial community composition and the relative abundance of operational taxonomic units (OTUs) changed over 48 h in all microcosms. Exposure to sunlight had a significant effect on both community composition and OTU abundance. The effect of marine microbiota, however, was minimal. The proportion of sewage-derived microorganisms present in the microcosms decreased rapidly within 48 h, and the decrease was the most pronounced in the presence of both sunlight and marine microbiota, where the proportion decreased from 85% to 3% of the total microbial community. The results from this study demonstrate the strong effect that sunlight has on microbial community composition, as measured by NGS, and the importance of considering temporal effects in future applications of NGS to identify microbial pollution sources. PMID:25576619

  2. Temporal stability of the microbial community in sewage-polluted seawater exposed to natural sunlight cycles and marine microbiota.

    PubMed

    Sassoubre, Lauren M; Yamahara, Kevan M; Boehm, Alexandria B

    2015-03-01

    Billions of gallons of untreated wastewater enter the coastal ocean each year. Once sewage microorganisms are in the marine environment, they are exposed to environmental stressors, such as sunlight and predation. Previous research has investigated the fate of individual sewage microorganisms in seawater but not the entire sewage microbial community. The present study used next-generation sequencing (NGS) to examine how the microbial community in sewage-impacted seawater changes over 48 h when exposed to natural sunlight cycles and marine microbiota. We compared the results from microcosms composed of unfiltered seawater (containing naturally occurring marine microbiota) and filtered seawater (containing no marine microbiota) to investigate the effect of marine microbiota. We also compared the results from microcosms that were exposed to natural sunlight cycles with those from microcosms kept in the dark to investigate the effect of sunlight. The microbial community composition and the relative abundance of operational taxonomic units (OTUs) changed over 48 h in all microcosms. Exposure to sunlight had a significant effect on both community composition and OTU abundance. The effect of marine microbiota, however, was minimal. The proportion of sewage-derived microorganisms present in the microcosms decreased rapidly within 48 h, and the decrease was the most pronounced in the presence of both sunlight and marine microbiota, where the proportion decreased from 85% to 3% of the total microbial community. The results from this study demonstrate the strong effect that sunlight has on microbial community composition, as measured by NGS, and the importance of considering temporal effects in future applications of NGS to identify microbial pollution sources.

  3. Coastal erosion as a source of mercury into the marine environment along the Polish Baltic shore.

    PubMed

    Bełdowska, Magdalena; Jędruch, Agnieszka; Łęczyński, Leszek; Saniewska, Dominika; Kwasigroch, Urszula

    2016-08-01

    The climate changes in recent years in the southern Baltic have been resulting in an increased frequency of natural extreme phenomena (i.e. storms, floods) and intensification of abrasion processes, which leads to introduction of large amounts of sedimentary deposits into the marine environment. The aim of this study was to determine the mercury load introduced to the Baltic Sea with deposits crumbling off the cliffs-parts of the coast that are the most exposed to abrasion. The studies were carried out close to five cliffs located on the Polish coast in the years 2011-2014. The results show that coastal erosion could be an important Hg source into the marine environment. This process is the third most important route, after riverine and precipitation input, by which Hg may enter the Gulf of Gdańsk. In the Hg budget in the gulf, the load caused by erosion (14.3 kg a(-1)) accounted for 80 % of the wet deposition and was 50 % higher than the amount of mercury introduced with dry deposition. Although the Hg concentration in the cliff deposits was similar to the natural background, due to their large mass, this problem could be significant. In addition, the preliminary studies on the impact of coastal erosion on the Hg level in the marine ecosystem have shown that this process may be one of the Hg sources into the trophic chain.

  4. Coastal erosion as a source of mercury into the marine environment along the Polish Baltic shore.

    PubMed

    Bełdowska, Magdalena; Jędruch, Agnieszka; Łęczyński, Leszek; Saniewska, Dominika; Kwasigroch, Urszula

    2016-08-01

    The climate changes in recent years in the southern Baltic have been resulting in an increased frequency of natural extreme phenomena (i.e. storms, floods) and intensification of abrasion processes, which leads to introduction of large amounts of sedimentary deposits into the marine environment. The aim of this study was to determine the mercury load introduced to the Baltic Sea with deposits crumbling off the cliffs-parts of the coast that are the most exposed to abrasion. The studies were carried out close to five cliffs located on the Polish coast in the years 2011-2014. The results show that coastal erosion could be an important Hg source into the marine environment. This process is the third most important route, after riverine and precipitation input, by which Hg may enter the Gulf of Gdańsk. In the Hg budget in the gulf, the load caused by erosion (14.3 kg a(-1)) accounted for 80 % of the wet deposition and was 50 % higher than the amount of mercury introduced with dry deposition. Although the Hg concentration in the cliff deposits was similar to the natural background, due to their large mass, this problem could be significant. In addition, the preliminary studies on the impact of coastal erosion on the Hg level in the marine ecosystem have shown that this process may be one of the Hg sources into the trophic chain. PMID:27164873

  5. Anaerobic ammonium oxidation by nitrite (anammox): Implications for N 2 production in coastal marine sediments

    NASA Astrophysics Data System (ADS)

    Engström, Pia; Dalsgaard, Tage; Hulth, Stefan; Aller, Robert C.

    2005-04-01

    The respiratory reduction of nitrate (denitrification) is acknowledged as the most important process that converts biologically available nitrogen to gaseous dinitrogen (N 2) in marine ecosystems. Recent findings, however, indicate that anaerobic ammonium oxidation by nitrite (anammox) may be an important pathway for N 2 formation and N removal in coastal marine sediments and in anoxic water columns of the oceans. In the present study, we explored this novel mechanism during N mineralization by 15N amendments (single and coupled additions of 15NH 4+, 14NO 3- and 15NO 3-) to surface sediments with a wide range of characteristics and overall reactivity. Patterns of 29/30N 2 production in the pore water during closed sediment incubations demonstrated anammox at all 7 of the investigated sites. Stoichiometric calculations revealed that 4% to 79% of total N 2 production was due to this novel route. The relative importance of anammox for N 2 release was inversely correlated with remineralized solute production, benthic O 2 consumption, and surface sediment Chl a. The observed correlations indicate competition between reductants for pore water nitrite during early diagenesis and that additional factors (e.g. availability of Mn-oxides), superimposed on overall patterns of diagenetic activity, are important for determining absolute and relative rates of anammox in coastal marine sediments.

  6. Approaches to investigating the ecology of plasmids in marine bacterial communities.

    PubMed

    Sobecky, Patricia A

    2002-11-01

    To better understand prokaryotic gene flux in marine ecosystems and to determine whether or not environmental parameters can effect the composition and structure of plasmid populations in marine bacterial communities, information on the distribution, diversity, and ecological traits of marine plasmids is necessary. This mini-review highlights recent insights gained into the molecular diversity and ecology of plasmids occurring in marine microbial communities.

  7. Bioluminescence to reveal structure and interaction of coastal planktonic communities

    NASA Astrophysics Data System (ADS)

    Moline, Mark A.; Blackwell, Shelley M.; Case, James F.; Haddock, Steven H. D.; Herren, Christen M.; Orrico, Cristina M.; Terrill, Eric

    2009-02-01

    Ecosystem function will in large part be determined by functional groups present in biological communities. The simplest distinction with respect to functional groups of an ecosystem is the differentiation between primary and secondary producers. A challenge thus far has been to examine these groups simultaneously with sufficient temporal and spatial resolution for observations to be relevant to the scales of change in coastal oceans. This study takes advantage of general differences in the bioluminescence flash kinetics between planktonic dinoflagellates and zooplankton to measure relative abundances of the two groups within the same-time space volume. This novel approach for distinguishing these general classifications using a single sensor is validated using fluorescence data and exclusion experiments. The approach is then applied to data collected from an autonomous underwater vehicle surveying >500 km in Monterey Bay and San Luis Obispo Bay, CA during the summers of 2002-2004. The approach also reveals that identifying trophic interaction between the two planktonic communities may also be possible.

  8. Low mercury levels in marine fish from estuarine and coastal environments in southern China.

    PubMed

    Pan, Ke; Chan, Heidi; Tam, Yin Ki; Wang, Wen-Xiong

    2014-02-01

    This study is the first comprehensive evaluation of total Hg and methylmercury (MeHg) concentrations in wild marine fish from an estuarine and a coastal ecosystem in southern China. A total of 571 fish from 54 different species were examined. Our results showed that the Hg levels were generally low in the fish, and the Hg levels were below 30 ng g(-1) (wet weight) for 82% of the samples, which may be related to the reduced size of the fish and altered food web structure due to overfishing. Decreased coastal wetland coverage and different carbon sources may be responsible for the habitat-specific Hg concentrations. The degree of biomagnification was relatively low in the two systems. PMID:24292441

  9. Halogenated phenolic contaminants in the blood of marine mammals from Japanese coastal waters.

    PubMed

    Nomiyama, Kei; Kanbara, Chika; Ochiai, Mari; Eguchi, Akifumi; Mizukawa, Hazuki; Isobe, Tomohiko; Matsuishi, Takashi; Yamada, Tadasu K; Tanabe, Shinsuke

    2014-02-01

    Information on accumulation of halogenated phenolic contaminants in the blood of marine mammal is limited. The present study, we determined the residue levels and patterns of chlorinated and brominated phenolic contaminants (OH-PCBs, OH-PBDEs and bromophenols) in the blood collected from pinnipeds (northern fur seal, spotted seal, Steller sea lion and ribbon seal) and small cetaceans (harbor porpoise and Dall's porpoise) from Japanese coastal waters. Concentrations of PCBs and OH-PCBs found in pinnipeds were the same as in small cetaceans living in the same coastal area. However, significantly lower concentrations of brominated compounds (PBDEs, MeO-PBDEs, OH-PBDEs) were found in the blood of pinnipeds than the levels found in cetacean species which live same area (p < 0.05). This difference of accumulation pattern suggested pinnipeds have an enhanced capability to degrade organobromine compounds relative to cetaceans. PMID:24060385

  10. Low mercury levels in marine fish from estuarine and coastal environments in southern China.

    PubMed

    Pan, Ke; Chan, Heidi; Tam, Yin Ki; Wang, Wen-Xiong

    2014-02-01

    This study is the first comprehensive evaluation of total Hg and methylmercury (MeHg) concentrations in wild marine fish from an estuarine and a coastal ecosystem in southern China. A total of 571 fish from 54 different species were examined. Our results showed that the Hg levels were generally low in the fish, and the Hg levels were below 30 ng g(-1) (wet weight) for 82% of the samples, which may be related to the reduced size of the fish and altered food web structure due to overfishing. Decreased coastal wetland coverage and different carbon sources may be responsible for the habitat-specific Hg concentrations. The degree of biomagnification was relatively low in the two systems.

  11. Marine Chemical Ecology: Chemical Signals and Cues Structure Marine Populations, Communities, and Ecosystems

    NASA Astrophysics Data System (ADS)

    Hay, Mark E.

    2009-01-01

    Chemical cues constitute much of the language of life in the sea. Our understanding of biotic interactions and their effects on marine ecosystems will advance more rapidly if this language is studied and understood. Here, I review how chemical cues regulate critical aspects of the behavior of marine organisms from bacteria to phytoplankton to benthic invertebrates and water column fishes. These chemically mediated interactions strongly affect population structure, community organization, and ecosystem function. Chemical cues determine foraging strategies, feeding choices, commensal associations, selection of mates and habitats, competitive interactions, and transfer of energy and nutrients within and among ecosystems. In numerous cases, the indirect effects of chemical signals on behavior have as much or more effect on community structure and function as the direct effects of consumers and pathogens. Chemical cues are critical for understanding marine systems, but their omnipresence and impact are inadequately recognized.

  12. Marine Chemical Ecology: Chemical Signals and Cues Structure Marine Populations, Communities, and Ecosystems

    PubMed Central

    Hay, Mark E.

    2012-01-01

    Chemical cues constitute much of the language of life in the sea. Our understanding of biotic interactions and their effects on marine ecosystems will advance more rapidly if this language is studied and understood. Here, I review how chemical cues regulate critical aspects of the behavior of marine organisms from bacteria to phytoplankton to benthic invertebrates and water column fishes. These chemically mediated interactions strongly affect population structure, community organization, and ecosystem function. Chemical cues determine foraging strategies, feeding choices, commensal associations, selection of mates and habitats, competitive interactions, and transfer of energy and nutrients within and among ecosystems. In numerous cases, the indirect effects of chemical signals on behavior have as much or more effect on community structure and function as the direct effects of consumers and pathogens. Chemical cues are critical for understanding marine systems, but their omnipresence and impact are inadequately recognized. PMID:21141035

  13. Marine chemical ecology: chemical signals and cues structure marine populations, communities, and ecosystems.

    PubMed

    Hay, Mark E

    2009-01-01

    Chemical cues constitute much of the language of life in the sea. Our understanding of biotic interactions and their effects on marine ecosystems will advance more rapidly if this language is studied and understood. Here, I review how chemical cues regulate critical aspects of the behavior of marine organisms from bacteria to phytoplankton to benthic invertebrates and water column fishes. These chemically mediated interactions strongly affect population structure, community organization, and ecosystem function. Chemical cues determine foraging strategies, feeding choices, commensal associations, selection of mates and habitats, competitive interactions, and transfer of energy and nutrients within and among ecosystems. In numerous cases, the indirect effects of chemical signals on behavior have as much or more effect on community structure and function as the direct effects of consumers and pathogens. Chemical cues are critical for understanding marine systems, but their omnipresence and impact are inadequately recognized.

  14. Habitat type and nursery function for coastal marine fish species, with emphasis on the Eastern Cape region, South Africa

    NASA Astrophysics Data System (ADS)

    Whitfield, Alan K.; Pattrick, Paula

    2015-07-01

    A considerable amount of research has been undertaken to document and assess the nursery function of a variety of coastal habitats for marine fish species around the world. Most of these studies have focused on particular habitats and have generally been confined to a limited range of fish species associated with specific nursery areas. In this review we conduct a general assessment of the state of knowledge of coastal habitats in fulfilling the nursery-role concept for marine fishes, with particular emphasis on biotic and abiotic factors that influence nursery value. A primary aim was to synthesize information that can be used to drive sound conservation planning and provide a conceptual framework so that new marine protected areas (MPAs) incorporate the full range of nursery areas that are present within the coastal zone. We also use published data from a coastal section in the Eastern Cape Province, South Africa, to highlight the differential use of shallow aquatic habitats by a range of juvenile marine fish species within this region. Although the Eastern Cape case study does not assess the relative growth, food availability or predation in nursery and non-nursery areas within the coastal zone, it does document which habitats are important to the juveniles of dominant marine species within each area. These habitats, which range from intertidal pools, subtidal gulleys and surf zones to estuaries, do appear to perform a key role in the biological success of species assemblages, with the juveniles of particular marine fishes tending to favour specific nursery areas. According to a multivariate analysis of nursery habitat use within this region, marine species using estuaries tend to differ considerably from those using nearshore coastal waters, with a similar pattern likely to occur elsewhere in the world.

  15. Determination of methylmercury in marine fish from coastal areas of Zhejiang, China.

    PubMed

    Huang, Zhu; Pan, Xiao-Dong; Han, Jian-Long; Wu, Ping-Gu; Tang, Jun; Tan, Ying

    2012-01-01

    The concentration of methylmercury (MMC) and total mercury (TMC) in marine fishes (five species) frequently consumed in the coastal areas of Zhejiang province, China, was determined. The method of high-performance liquid chromatography-atomic fluorescence spectrometry (HPLC-AFS) with the microwave-assisted extraction was used for the MMC determination. TMC was analysed by a direct mercury analyser. MMC and TMC concentrations in five fish species ranged from 53 to 158 µg kg⁻¹ and 60 to 172 µg kg⁻¹, respectively. The proportion of MMC levels in TMC was greater than 80%. The highest MMC and TMC levels were found in Hairtail.

  16. Structuring factors and recent changes in subtidal macrozoobenthic communities of a coastal lagoon, Arcachon Bay (France)

    NASA Astrophysics Data System (ADS)

    Blanchet, Hugues; de Montaudouin, Xavier; Chardy, Pierre; Bachelet, Guy

    2005-09-01

    Fourteen years after a previous investigation in Arcachon Bay (SW France), the quantitative distribution of subtidal macrozoobenthic communities was assessed in 2002 through a stratified sampling strategy involving a larger number of stations (89 vs. 18) than in 1988. A total of 226 taxa were recorded. Cluster Analysis and Correspondence Analysis identified nine station groups corresponding to benthic faunal assemblages and their characteristic species. Multiple Discriminant Analysis showed that the main environmental factors influencing the distribution of faunal assemblages were sediment parameters and distance from the ocean. Depth was a minor structuring factor. At the scale of the lagoon, biogenic structures such as Zostera marina beds, Crepidula fornicata-dominated bottoms or dead oyster shell bottoms did not display any particular assemblage of infauna. Comparison with previous quantitative data from the 1988 survey provided more precision on the distribution of benthic assemblages and revealed community changes at a 14-year scale. These modifications reflected a general increase of silt and clay content in the sediment in the internal parts of channels, inducing community change. These changes can be correlated to the recent first signs of a moderate eutrophication process which have appeared, since 1988, through the development of green macroalgae in some parts of the lagoon. This trend was enhanced in transverse channels with reduced hydrodynamics and led to muddy areas where green macroalgae tended to accumulate. Locally, the dredging of sandbanks induced stronger currents and allowed the marine influence to occur, and also induced community change. These observations confirm that surveys of macrobenthic communities are useful tools to assess coastal ecosystem change even in moderately disturbed environments.

  17. Is the Coastal Ocean a Source of Mercury to Marine Advective Fog

    NASA Astrophysics Data System (ADS)

    Heim, W. A.; Weiss-Penzias, P. S.; Fernandez, D.; Byington, A.; Bonnema, A.; Beebe, C.; Chiswell, H.; Olson, A.; Coale, K. H.

    2014-12-01

    Marine advective fog is a common feature along the California coast during the summer season. This fog provides an important water source to many endemic fauna and flora. Studies are underway to better understand the chemical makeup of Pacific marine fog as it is an important input to the hydrologic cycle. We report results from our study focused on investigating the potential for coastal ocean upwelling to contribute volatile organic mercury to the overlying atmosphere where it could be incorporated into cloud droplets as monomethyl mercury (MMHg). Preliminary research by this group has indicated that fog water inputs to certain coastal locations may contribute up to 99% of the MMHg flux to land compared to the MMHg flux in rain. Mercury measurements, including total mercury (Hgt), MMHg, elemental mercury (Hg0), and dimethyl mercury (DMHg), were made to unfiltered water collected from depth profiles at 12 stations from Big Sur to Trinidad Head over the California shelf during summer 2014. Profiles of Hgt ranged from 0.3-2.4 pM and were similar to other reported measurements of Hgt for the North Pacific. A large range in concentration was observed for MMHg (10-540 fM) with elevated values generally occurring below the oxycline (>50m). Concentrations of Hg0 were 0.06 to 0.57 pM with elevated concentrations at depth relative to surface values. Depth profiles of DMHg were similar to MMHg and concentrations were measured from 10-295 fM with highest concentrations observed below the oxycline. Surface concentrations of DMHg averaged 40 ± 22 fM. Given the observed profiles for DMHg and the fact that it is sparingly soluble in water, a net flux of DMHg to the atmosphere is likely occurring. Based on these findings and the fact that MMHg and DMHg concentrations in the coastal ocean were highest in the low oxygen zone, we speculate that mercury is methylated in the water column and/or sediments as DMHg and that this water is upwelled seasonally in the coastal zones and

  18. Dispersal kernel estimation: A comparison of empirical and modelled particle dispersion in a coastal marine system

    NASA Astrophysics Data System (ADS)

    Hrycik, Janelle M.; Chassé, Joël; Ruddick, Barry R.; Taggart, Christopher T.

    2013-11-01

    Early life-stage dispersal influences recruitment and is of significance in explaining the distribution and connectivity of marine species. Motivations for quantifying dispersal range from biodiversity conservation to the design of marine reserves and the mitigation of species invasions. Here we compare estimates of real particle dispersion in a coastal marine environment with similar estimates provided by hydrodynamic modelling. We do so by using a system of magnetically attractive particles (MAPs) and a magnetic-collector array that provides measures of Lagrangian dispersion based on the time-integration of MAPs dispersing through the array. MAPs released as a point source in a coastal marine location dispersed through the collector array over a 5-7 d period. A virtual release and observed (real-time) environmental conditions were used in a high-resolution three-dimensional hydrodynamic model to estimate the dispersal of virtual particles (VPs). The number of MAPs captured throughout the collector array and the number of VPs that passed through each corresponding model location were enumerated and compared. Although VP dispersal reflected several aspects of the observed MAP dispersal, the comparisons demonstrated model sensitivity to the small-scale (random-walk) particle diffusivity parameter (Kp). The one-dimensional dispersal kernel for the MAPs had an e-folding scale estimate in the range of 5.19-11.44 km, while those from the model simulations were comparable at 1.89-6.52 km, and also demonstrated sensitivity to Kp. Variations among comparisons are related to the value of Kp used in modelling and are postulated to be related to MAP losses from the water column and (or) shear dispersion acting on the MAPs; a process that is constrained in the model. Our demonstration indicates a promising new way of 1) quantitatively and empirically estimating the dispersal kernel in aquatic systems, and 2) quantitatively assessing and (or) improving regional hydrodynamic

  19. Occurrence of synthetic musk fragrances in marine mammals and sharks from Japanese coastal waters.

    PubMed

    Nakata, Haruhiko

    2005-05-15

    In this study, the occurrence of the polycyclic musk fragrances HHCB (1,3,4,6,7,8-hexahydro-4,6,6,7,8,8-hexamethylcyclopenta[g]-2-benzopyran) and AHTN (7-acetyl-1,1,3,4,4,6-hexamethyltetrahydeonaphthalene) in marine mammals and sharks collected from Japanese coastal waters is reported. HHCB was present in the blubbers of all finless porpoises (Neophocaena phocaenoides) analyzed (n = 8), at levels ranging from 13 to 149 ng/g on a wet weight basis. A fetus sample of finless porpoise contained a notable concentration of HHCB (26 ng/g wet wt), suggesting transplacental transfer of this compound. Among 12 tissues and organs of a finless porpoise analyzed, the highest HHCB concentration was found in blubber, followed by kidney. This indicates that HHCB accumulates in lipid-rich tissues in marine mammals, which is similar to the accumulation profiles of persistent organochlorines, such as PCBs and DDTs. In general, the residue levels of AHTN and nitro musks were low or below the detection limits in finless porpoises, implying either less usage in Japan or high metabolic capacity of these compounds in this animal. HHCB was also found in the livers of five hammerhead sharks (Sphrna lewini) from Japanese coastal waters, at concentrations ranging from 16 to 48 ng/g wet wt. Occurrence of HHCB in higher trophic organisms strongly suggests that it is less degradable in the environment and accumulates in the top predators of marine food chains. This is the first report on the accumulation of synthetic musk fragrances in marine mammals and sharks.

  20. Climate change impacts on U.S. coastal and marine ecosystems

    USGS Publications Warehouse

    Scavia, Donald; Field, John C.; Boesch, Donald F.; Buddemeier, Robert W.; Burkett, Virginia; Cayan, Daniel R.; Fogarty, Michael; Harwell, Mark A.; Howarth, Robert W.; Mason, Curt; Reed, Denise J.; Royer, Thomas C.; Sallenger, Asbury H.; Titus, James G.

    2002-01-01

    Increases in concentrations of greenhouse gases projected for the 21st century are expected to lead to increased mean global air and ocean temperatures. The National Assessment of Potential Consequences of Climate Variability and Change (NAST 2001) was based on a series of regional and sector assessments. This paper is a summary of the coastal and marine resources sector review of potential impacts on shorelines, estuaries, coastal wetlands, coral reefs, and ocean margin ecosystems. The assessment considered the impacts of several key drivers of climate change: sea level change; alterations in precipitation patterns and subsequent delivery of freshwater, nutrients, and sediment; increased ocean temperature; alterations in circulation patterns; changes in frequency and intensity of coastal storms; and increased levels of atmospheric CO2. Increasing rates of sea-level rise and intensity and frequency of coastal storms and hurricanes over the next decades will increase threats to shorelines, wetlands, and coastal development. Estuarine productivity will change in response to alteration in the timing and amount of freshwater, nutrients, and sediment delivery. Higher water temperatures and changes in freshwater delivery will alter estuarine stratification, residence time, and eutrophication. Increased ocean temperatures are expected to increase coral bleaching and higher CO2 levels may reduce coral calcification, making it more difficult for corals to recover from other disturbances, and inhibiting poleward shifts. Ocean warming is expected to cause poleward shifts in the ranges of many other organisms, including commercial species, and these shifts may have secondary effects on their predators and prey. Although these potential impacts of climate change and variability will vary from system to system, it is important to recognize that they will be superimposed upon, and in many cases intensify, other ecosystem stresses (pollution, harvesting, habitat destruction

  1. Elevated Accumulation of Parabens and their Metabolites in Marine Mammals from the United States Coastal Waters.

    PubMed

    Xue, Jingchuan; Sasaki, Nozomi; Elangovan, Madhavan; Diamond, Guthrie; Kannan, Kurunthachalam

    2015-10-20

    The widespread exposure of humans to parabens present in personal care products is well-known. Nevertheless, little is known about the accumulation of parabens in marine organisms. In this study, six parabens and four common metabolites of parabens were measured in 121 tissue samples from eight species of marine mammals collected along the coastal waters of Florida, California, Washington, and Alaska. Methyl paraben (MeP) was the predominant compound found in the majority of the marine mammal tissues analyzed, and the highest concentration found was 865 ng/g (wet weight [wet wt]) in the livers of bottlenose dolphins from Sarasota Bay, FL. 4-Hydroxybenzoic acid (4-HB) was the predominant paraben metabolite found in all tissue samples. The measured concentrations of 4-HB were on the order of hundreds to thousands of ng/g tissue, and these values are some of the highest ever reported in the literature. MeP and 4-HB concentrations showed a significant positive correlation (p < 0.05), which suggested a common source of exposure to these compounds in marine mammals. Trace concentrations of MeP and 4-HB were found in the livers of polar bears from the Chuckchi Sea and Beaufort Sea, which suggested widespread distribution of MeP and 4-HB in the oceanic environment. PMID:26379094

  2. Elevated Accumulation of Parabens and their Metabolites in Marine Mammals from the United States Coastal Waters.

    PubMed

    Xue, Jingchuan; Sasaki, Nozomi; Elangovan, Madhavan; Diamond, Guthrie; Kannan, Kurunthachalam

    2015-10-20

    The widespread exposure of humans to parabens present in personal care products is well-known. Nevertheless, little is known about the accumulation of parabens in marine organisms. In this study, six parabens and four common metabolites of parabens were measured in 121 tissue samples from eight species of marine mammals collected along the coastal waters of Florida, California, Washington, and Alaska. Methyl paraben (MeP) was the predominant compound found in the majority of the marine mammal tissues analyzed, and the highest concentration found was 865 ng/g (wet weight [wet wt]) in the livers of bottlenose dolphins from Sarasota Bay, FL. 4-Hydroxybenzoic acid (4-HB) was the predominant paraben metabolite found in all tissue samples. The measured concentrations of 4-HB were on the order of hundreds to thousands of ng/g tissue, and these values are some of the highest ever reported in the literature. MeP and 4-HB concentrations showed a significant positive correlation (p < 0.05), which suggested a common source of exposure to these compounds in marine mammals. Trace concentrations of MeP and 4-HB were found in the livers of polar bears from the Chuckchi Sea and Beaufort Sea, which suggested widespread distribution of MeP and 4-HB in the oceanic environment.

  3. Ratio of the concentration of anthraquinone to anthracene in coastal marine sediments.

    PubMed

    McKinney, R A; Pruell, R J; Burgess, R M

    1999-04-01

    The ratio of the concentration of the oxidation product anthraquinone to that of its parent polycyclic aromatic hydrocarbon anthracene is reported for several coastal marine sediments. The ratio ranges from 0.317 in a highly contaminated industrialized harbor to 2.81 in a remote, less contaminated site. We hypothesize that differences in this ratio result from the input source of PAHs, with input from atmospheric deposition at remote sites resulting in a predominance of anthraquinone (ratio > 1), and direct discharge to highly contaminated industrialized harbors resulting in a predominance of anthracene (ratio < 1). To support this hypothesis, the fate of anthracene in the marine environment was investigated with respect to conversion to its oxidation product, anthraquinone. Once associated with sediments, anthracene is believed to be relatively persistent; however, it can potentially be subjected to oxidation via biological (microbial degradation) and chemical (chemical oxidation and photooxidation) processes. An assessment of the extent of oxidation of anthracene associated with sediments was conducted both under conditions simulating those found in the marine environment and under rigorous conditions by exposure to UV radiation. Results of this study show that while anthracene associated with marine sediments does not readily undergo oxidation to anthraquinone under conditions normally encountered in the marine environment, under extreme conditions anthracene is photooxidized by exposure to UV radiation. The extent of oxidation is influenced by sediment characteristics such as percent organic carbon, humic acid content and sediment surface area. The relative stability of anthracene under normal conditions may help to validate the use of the anthraquinone to anthracene ratio in marine sediments as an environmental marker of contaminant source.

  4. USGS St. Petersburg Coastal and Marine Science Center--Research activities in the U.S. Virgin Islands

    USGS Publications Warehouse

    Cimitile, Matthew

    2011-01-01

    The U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center in Florida investigates earth-science processes related to coastal and marine environments as well as to societal implications of natural hazards, resource sustainability, and environmental change. The Center is conducting ongoing research in and around the U.S. Virgin Islands that is providing baseline information for resource management and for assessing the health of and environmental changes to vital ecosystems such as coral reefs. In particular, projects are improving the understanding of coral health, advancing the ability to forecast future changes in coral reef ecosystems, and acquiring topographic data for use in inventorying, monitoring, and conserving coastal and marine environments.

  5. COASTAL WETLAND INSECT COMMUNITIES ALONG A TROPHIC GRADIENT IN GREEN BAY, LAKE MICHIGAN

    EPA Science Inventory

    Insects of Great Lakes coastal wetlands have received little attention in spite of their importance in food webs and sensitivity to anthropogenic stressors. We characterized insect communities from four coastal wetlands that spanned the length of a trophic gradient in Green Bay d...

  6. Environmental controls on microbial community cycling in modern marine stromatolites

    NASA Astrophysics Data System (ADS)

    Bowlin, Emily M.; Klaus, James S.; Foster, Jamie S.; Andres, Miriam S.; Custals, Lillian; Reid, R. Pamela

    2012-07-01

    Living stromatolites on the margins of Exuma Sound, Bahamas, are the only examples of modern stromatolites forming in open marine conditions similar to those that may have existed on Precambrian platforms. Six microbial mat types have previously been documented on the surfaces of stromatolites along the eastern side of Highborne Cay (Schizothrix, Solentia, heterotrophic biofilm, stalked diatom, tube diatom and Phormidium mats). Cycling of these communities create laminae with distinct microstructures. Subsurface laminae thus represent a chronology of former surface mats. The present study documents the effects of environmental factors on surface microbial communities of modern marine stromatolites and identifies potential causes of microbial mat cycling. Mat type and burial state at 43 markers along a stromatolitic reef on the margin of Highborne Cay were monitored over a two-year period (2005-2006). Key environmental parameters (i.e., temperature, light, wind, water chemistry) were also monitored. Results indicated that the composition of stromatolite surface mats and transitions from one mat type to another are controlled by both seasonal and stochastic events. All six stromatolite mat communities at Highborne Cay showed significant correlations with water temperature. Heterotrophic biofilms, Solentia, stalked diatom and Phormidium mats showed positive correlations with temperature, whereas Schizothrix and tube diatom communities showed negative correlations. A significant correlation with light (photosynthetically active radiation, PAR) was detected only for the heterotrophic biofilm community. No significant correlations were found between mat type and the monitored wind intensity data, but field observations indicated that wind-related events such as storms and sand abrasion play important roles in the transitions from one mat type to another. An integrated model of stromatolite mat community cycling is developed that includes both predictable seasonal

  7. Short- and long-term conditioning of a temperate marine diatom community to acidification and warming.

    PubMed

    Tatters, Avery O; Roleda, Michael Y; Schnetzer, Astrid; Fu, Feixue; Hurd, Catriona L; Boyd, Philip W; Caron, David A; Lie, Alle A Y; Hoffmann, Linn J; Hutchins, David A

    2013-01-01

    Ocean acidification and greenhouse warming will interactively influence competitive success of key phytoplankton groups such as diatoms, but how long-term responses to global change will affect community structure is unknown. We incubated a mixed natural diatom community from coastal New Zealand waters in a short-term (two-week) incubation experiment using a factorial matrix of warming and/or elevated pCO2 and measured effects on community structure. We then isolated the dominant diatoms in clonal cultures and conditioned them for 1 year under the same temperature and pCO2 conditions from which they were isolated, in order to allow for extended selection or acclimation by these abiotic environmental change factors in the absence of interspecific interactions. These conditioned isolates were then recombined into 'artificial' communities modelled after the original natural assemblage and allowed to compete under conditions identical to those in the short-term natural community experiment. In general, the resulting structure of both the unconditioned natural community and conditioned 'artificial' community experiments was similar, despite differences such as the loss of two species in the latter. pCO2 and temperature had both individual and interactive effects on community structure, but temperature was more influential, as warming significantly reduced species richness. In this case, our short-term manipulative experiment with a mixed natural assemblage spanning weeks served as a reasonable proxy to predict the effects of global change forcing on diatom community structure after the component species were conditioned in isolation over an extended timescale. Future studies will be required to assess whether or not this is also the case for other types of algal communities from other marine regimes. PMID:23980240

  8. Multiresolution in CROCO (Coastal and Regional Ocean Community model)

    NASA Astrophysics Data System (ADS)

    Debreu, Laurent; Auclair, Francis; Benshila, Rachid; Capet, Xavier; Dumas, Franck; Julien, Swen; Marchesiello, Patrick

    2016-04-01

    CROCO (Coastal and Regional Ocean Community model [1]) is a new oceanic modeling system built upon ROMS_AGRIF and the non-hydrostatic kernel of SNH, gradually including algorithms from MARS3D (sediments)and HYCOM (vertical coordinates). An important objective of CROCO is to provide the possibility of running truly multiresolution simulations. Our previous work on structured mesh refinement [2] allowed us to run two-way nesting with the following major features: conservation, spatial and temporal refinement, coupling at the barotropic level. In this presentation, we will expose the current developments in CROCO towards multiresolution simulations: connection between neighboring grids at the same level of resolution and load balancing on parallel computers. Results of preliminary experiments will be given both on an idealized test case and on a realistic simulation of the Bay of Biscay with high resolution along the coast. References: [1] : CROCO : http://www.croco-ocean.org [2] : Debreu, L., P. Marchesiello, P. Penven, and G. Cambon, 2012: Two-way nesting in split-explicit ocean models: algorithms, implementation and validation. Ocean Modelling, 49-50, 1-21.

  9. Community and household determinants of water quality in coastal Ghana.

    PubMed

    McGarvey, Stephen T; Buszin, Justin; Reed, Holly; Smith, David C; Rahman, Zarah; Andrzejewski, Catherine; Awusabo-Asare, Kofi; White, Michael J

    2008-09-01

    Associations between water sources, socio-demographic characteristics and household drinking water quality are described in a representative sample of six coastal districts of Ghana's Central Region. Thirty-six enumeration areas (EAs) were randomly chosen from a representative survey of 90 EAs in rural, semi-urban and urban residence strata. In each EA, 24 households were randomly chosen for water quality sampling and socio-demographic interview. Escherichia coli per 100 ml H2O was quantified using the IDEXX Colilert system and multi-stage regression models estimated cross-sectional associations between water sources, sanitation and socio-demographic factors. Almost three quarters, 74%, of the households have > 2 E. coli /100 ml H2O. Tap water has significantly lower E. coli levels compared with surface or rainwater and well water had the highest levels. Households with a water closet toilet have significantly lower E. coli compared with those using pit latrines or no toilets. Household size is positively associated, and a possessions index is negatively associated, with E. coli. Variations in community and household socio-demographic and behavioural factors are key determinants of drinking water quality. These factors should be included in planning health education associated with investments in water systems.

  10. Community and household determinants of water quality in coastal Ghana

    PubMed Central

    McGarvey, Stephen T.; Buszin, Justin; Reed, Holly; Smith, David C.; Rahman, Zarah; Andrzejewski, Catherine; Awusabo-Asare, Kofi; White, Michael J.

    2013-01-01

    Associations between water sources, socio-demographic characteristics and household drinking water quality are described in a representative sample of six coastal districts of Ghana’s Central Region. Thirty-six enumeration areas (EAs) were randomly chosen from a representative survey of 90 EAs in rural, semi-urban and urban residence strata. In each EA, 24 households were randomly chosen for water quality sampling and socio-demographic interview. Escherichia coli per 100 ml H2O was quantified using the IDEXX Colilert® system and multi-stage regression models estimated cross-sectional associations between water sources, sanitation and socio-demographic factors. Almost three quarters, 74%, of the households have > 2 E. coli /100 ml H2O. Tap water has significantly lower E. coli levels compared with surface or rainwater and well water had the highest levels. Households with a water closet toilet have significantly lower E. coli compared with those using pit latrines or no toilets. Household size is positively associated, and a possessions index is negatively associated, with E. coli. Variations in community and household socio-demographic and behavioural factors are key determinants of drinking water quality. These factors should be included in planning health education associated with investments in water systems. PMID:19108554

  11. Toward a community coastal sediment transport modeling system: the second workshop

    USGS Publications Warehouse

    Sherwood, Christopher R.; Harris, Courtney K.; Geyer, W. Rockwell; Butman, Bradford

    2002-01-01

    Models for transport and the long-term fate of particles in coastal waters are essential for a variety of applications related to commerce, defense, public health, and the quality of the marine environment. Examples include: analysis of waste disposal and transport and the fate of contaminated materials; evaluation of burial rates for naval mines or archaeological artifacts; prediction of water-column optical properties; analysis of transport and the fate of biological particles; prediction of coastal flooding and coastal erosion; evaluation of impacts of sea-level or wave-climate changes and coastal development; planning for construction and maintenance of navigable waterways; evaluation of habitat for commercial fisheries; evaluation of impacts of natural or anthropogenic changes in coastal conditions on recreational activities; and design of intakes and outfalls for sewage treatment, cooling systems, and desalination plants.

  12. Retrospective quantification of estuarine feeding activity by coastally caught marine fishes

    NASA Astrophysics Data System (ADS)

    Leakey, Chris D. B.; Attrill, Martin J.; Jennings, Simon; Fitzsimons, Mark F.

    2008-10-01

    Many commercially important marine fishes are found in estuaries, particularly as juveniles. The estuaries may provide a thermal resource, refuge from predators and a source of abundant prey. Here, carbon ( δ13C) and sulphur ( δ34S) stable isotope data from coastally caught common sole ( Solea solea) and whiting ( Merlangius merlangus) were used in independent mixing models to determine relative contributions of estuarine prey to white muscle composition. The influence of assumed trophic fractionation was also investigated with sensitivity analysis. At the population level, there was evidence for estuarine contributions to muscle tissue in both species (means from 16.37% to 61.28%), though among-individual variability was considerable. δ13C and δ34S model outputs implied different estuarine contributions for the same individual, likely reflecting the slower turnover of δ34S than δ13C. Sole exhibited population level plasticity in their feeding as juveniles, separating into two distinct juvenile sub-populations; but they are less plastic as older fish when they adopt increasingly marine diets. Whiting show individual plasticity as both juveniles and adults, feeding on prey of estuarine and coastal origin.

  13. Geographical patterns of dominant bivalves and a polychaete in Europe: no metapopulations in the marine coastal zone?

    NASA Astrophysics Data System (ADS)

    Hummel, Herman

    2003-01-01

    The genetic diversity, differentiation and performance of some dominant invertebrates in the marine coastal zone of Europe are reviewed in order to discuss the use of the metapopulation concept in the marine coastal realm. A consistently high genetic diversity of the species studied (mussels of the Mytilus edulis complex, Baltic clams Macoma balthica and lugworms A renicola marina), a low differentiation and an almost uniform ecophysiological performance (determined by growth, maximum length, level reserve constituents or stress resistance) all along the coast of Europe do not support the use of the metapopulation concept.

  14. Geographical patterns of dominant bivalves and a polychaete in Europe: no metapopulations in the marine coastal zone?

    NASA Astrophysics Data System (ADS)

    Hummel, Herman

    2002-12-01

    The genetic diversity, differentiation and performance of some dominant invertebrates in the marine coastal zone of Europe are reviewed in order to discuss the use of the metapopulation concept in the marine coastal realm. A consistently high genetic diversity of the species studied (mussels of the Mytilus edulis complex, Baltic clams Macoma balthica and lugworms Arenicola marina), a low differentiation and an almost uniform ecophysiological performance (determined by growth, maximum length, level reserve constituents or stress resistance) all along the coast of Europe do not support the use of the metapopulation concept.

  15. Territorial user rights for fisheries as ancillary instruments for marine coastal conservation in Chile.

    PubMed

    Gelcich, Stefan; Fernández, Miriam; Godoy, Natalio; Canepa, Antonio; Prado, Luis; Castilla, Juan Carlos

    2012-12-01

    Territorial user rights for fisheries have been advocated as a way to achieve sustainable resource management. However, few researchers have empirically assessed their potential as ancillary marine conservation instruments by comparing them to no-take marine protected areas. In kelp (Lessonia trabeculata) forests of central Chile, we compared species richness, density, and biomass of macroinvertebrates and reef fishes among territorial-user-right areas with low-level and high-level enforcement, no-take marine protected areas, and open-access areas in 42 100-m subtidal transects. We also assessed structural complexity of the kelp forest and substratum composition. Multivariate randomized permutation tests indicated macroinvertebrate and reef fish communities associated with the different access regimes differed significantly. Substratum composition and structural complexity of kelp forest did not differ among access regimes. Univariate analyses showed species richness, biomass, and density of macroinvertebrates and reef fishes were greater in highly enforced territorial-user-right areas and no-take marine protected areas than in open-access areas. Densities of macroinvertebrates and reef fishes of economic importance were not significantly different between highly enforced territorial-user-right and no-take marine protected areas. Densities of economically important macroinvertebrates in areas with low-level enforcement were significantly lower than those in areas with high-level enforcement and no-take marine protected areas but were significantly higher than in areas with open access. Territorial-user-right areas could be important ancillary conservation instruments if they are well enforced.

  16. Communities of sediment ammonia-oxidizing bacteria along a coastal pollution gradient in the East China Sea.

    PubMed

    Hou, Manhua; Xiong, Jinbo; Wang, Kai; Ye, Xiansen; Ye, Ran; Wang, Qiong; Hu, Changju; Zhang, Demin

    2014-09-15

    Anthropogenic nitrogen (N) discharges has caused eutrophication in coastal zones. Ammonia-oxidizing bacteria (AOB) convert ammonia to nitrite and play important roles in N transformation. Here, we used pyrosequencing based on the amoA gene to investigate the response of the sediment AOB community to an N pollution gradient in the East China Sea. The results showed that AOB assemblages were primarily affiliated with Nitrosospira-like lineages, and only 0.4% of those belonged to Nitrosomonas-like lineage. The Nitrosospira-like lineage was separated into four clusters that were most similar to the sediment AOB communities detected in adjacent marine regions. Additionally, one clade was out grouped from the AOB lineages, which shared the high similarities with pmoA gene. The AOB community structures substantially changed along the pollution gradient, which were primarily shaped by NH4(+)-N, NO3(-)-N, SO4(2)(-)-S, TP and Eh. These results demonstrated that coastal pollution could dramatically influence AOB communities, which, in turn, may change ecosystem function.

  17. Sea Level Rise: Vulnerability of California's Coastal Communities and Adaptation Strategies for Reducing Future Impacts Gary Griggs Director Institute of Marine Sciences University of California Santa Cruz Nicole L. Russell Ph.D. Student Department of Earth and Planetary Sciences University of California Santa Cruz

    NASA Astrophysics Data System (ADS)

    Griggs, G. B.; Russell, N.

    2010-12-01

    California’s coastal communities are vulnerable to the effects of rising sea levels, which may be 11 to 18 inches higher by 2050 and 23 to 55 inches higher by 2100 than in 2000. Local governments will need to plan for progressive inundation of low-lying areas, as well as increased erosion and storm damage. Although there is extensive research on climate change and sea level rise, local government staff is typically removed from this information and often lack the time or resources necessary for keeping up with the most recent information. Specifically, there is a disconnect between the latest science and the practice of coastal planners in dealing with sea level rise issues. Improving the transfer of relevant information and resources from scientists to decision-makers should encourage and assist local governments in their responses to this developing issue. Designing and implementing adaptation plans and developing policies for sea level rise are challenging. Each coastal community is unique in its geographic setting and demographics and therefore faces vulnerabilities that differ from those of other communities. Uplift and subsidence, for example, cause regional variations in the rate of sea level rise. Planning staff needs to understand the local impacts of sea level rise in order to take appropriate actions. Even when the potential threats are reasonably well understood, the gradual nature of sea level rise can make it hard to formulate, approve and implement policies that may not affect communities for decades to come. Fortunately, there are tools and resources available to assist planners. Several communities in California have recently completed climate change adaptation plans or are in the process of preparing such plans. However, these documents are not focused solely upon the specific issues associated with sea level rise. A study is underway to fill that void, which includes the development of an informative guide for local government agencies to use

  18. Synoptic forcing of coastal-trapped disturbances in the marine atmospheric boundary layer

    SciTech Connect

    Rogerson, A.M.; Samelson, R.M.

    1994-12-31

    Throughout most of the summer, a strong temperature inversion exists off the west coast of the US due to the presence of a North Pacific subtropical high that dominates the area. The coastal mountains act as a barrier to the flow in the horizontal, making it possible for synoptic-scale forcing to give rise to coastal-trapped phenomena. In order to better understand the nature of these events, the authors have chosen to work within a simple framework for which they can obtain analytic solutions and answer fundamental questions concerning the generation, structure, and propagation of the disturbances. The authors use a homogeneous, reduced-gravity, shallow-water, f-plane model of the flow in which the coastal mountains are represented by a vertical wall with no alongshore variation. To maintain the tractability of an analytical solution, linearity is retained although no scale assumptions are made. The authors are interested in the response of the marine layer subject to forcing by upper-level pressure disturbances and dissipation in the form of wind stress at the sea surface.

  19. Modelling molecular iodine emissions in a coastal marine environment: the link to new particle formation

    NASA Astrophysics Data System (ADS)

    Saiz-Lopez, A.; Plane, J. M. C.; McFiggans, G.; Williams, P. I.; Ball, S. M.; Bitter, M.; Jones, R. L.; Hongwei, C.; Hoffmann, T.

    2005-07-01

    A model of iodine chemistry in the marine boundary layer (MBL) has been used to investigate the impact of daytime coastal emissions of molecular iodine (I2). The model contains a full treatment of gas-phase iodine chemistry, combined with a description of the nucleation and growth, by condensation and coagulation, of iodine oxide nano-particles. In-situ measurements of coastal emissions of I2 made by the broadband cavity ring-down spectroscopy (BBCRDS) and inductively coupled plasma-mass spectrometry (ICP/MS) techniques are presented and compared to long path differential optical absorption spectroscopy (DOAS) observations of I2 at Mace Head, Ireland. Simultaneous measurements of enhanced I2 emissions and particle bursts show that I2 is almost certainly the main precursor of new particles at this coastal location. The ratio of IO to I2 predicted by the model indicates that the iodine species observed by the DOAS are concentrated over a short distance (about 8% of the 4.2 km light path) consistent with the intertidal zone, bringing them into good agreement with the I2 measurements made by the two in-situ techniques. The model is then used to investigate the effect of iodine emission on ozone depletion, and the production of new particles and their evolution to form stable cloud condensation nuclei (CCN).

  20. Modelling molecular iodine emissions in a coastal marine environment: the link to new particle formation

    NASA Astrophysics Data System (ADS)

    Saiz-Lopez, A.; Plane, J. M. C.; McFiggans, G.; Williams, P. I.; Ball, S. M.; Bitter, M.; Jones, R. L.; Hongwei, C.; Hoffmann, T.

    2006-03-01

    A model of iodine chemistry in the marine boundary layer (MBL) has been used to investigate the impact of daytime coastal emissions of molecular iodine (I2). The model contains a full treatment of gas-phase iodine chemistry, combined with a description of the nucleation and growth, by condensation and coagulation, of iodine oxide nano-particles. In-situ measurements of coastal emissions of I2 made by the broadband cavity ring-down spectroscopy (BBCRDS) and inductively coupled plasma-mass spectrometry (ICP/MS) techniques are presented and compared to long path differential optical absorption spectroscopy (DOAS) observations of I2 at Mace Head, Ireland. Simultaneous measurements of enhanced I2 emissions and particle bursts show that I2 is almost certainly the main precursor of new particles at this coastal location. The ratio of IO to I2 predicted by the model indicates that the iodine species observed by the DOAS are concentrated over a short distance (about 8% of the 4.2 km light path) consistent with the intertidal zone, bringing them into good agreement with the I2 measurements made by the two in-situ techniques. The model is then used to investigate the effect of iodine emission on ozone depletion, and the production of new particles and their evolution to form stable cloud condensation nuclei (CCN).

  1. Uncovering the volatile nature of tropical coastal marine ecosystems in a changing world.

    PubMed

    Exton, Dan A; McGenity, Terry J; Steinke, Michael; Smith, David J; Suggett, David J

    2015-04-01

    Biogenic volatile organic compounds (BVOCs), in particular dimethyl sulphide (DMS) and isoprene, have fundamental ecological, physiological and climatic roles. Our current understanding of these roles is almost exclusively established from terrestrial or oceanic environments but signifies a potentially major, but largely unknown, role for BVOCs in tropical coastal marine ecosystems. The tropical coast is a transition zone between the land and ocean, characterized by highly productive and biodiverse coral reefs, seagrass beds and mangroves, which house primary producers that are amongst the greatest emitters of BVOCs on the planet. Here, we synthesize our existing understanding of BVOC emissions to produce a novel conceptual framework of the tropical marine coast as a continuum from DMS-dominated reef producers to isoprene-dominated mangroves. We use existing and previously unpublished data to consider how current environmental conditions shape BVOC production across the tropical coastal continuum, and in turn how BVOCs can regulate environmental stress tolerance or species interactions via infochemical networks. We use this as a framework to discuss how existing predictions of future tropical coastal BVOC emissions, and the roles they play, are effectively restricted to present day 'baseline' trends of BVOC production across species and environmental conditions; as such, there remains a critical need to focus research efforts on BVOC responses to rapidly accelerating anthropogenic impacts at local and regional scales. We highlight the complete lack of current knowledge required to understand the future ecological functioning of these important systems, and to predict whether feedback mechanisms are likely to regulate or exacerbate current climate change scenarios through environmentally and ecologically mediated changes to BVOC budgets at the ecosystem level.

  2. Marine natural hazards in coastal zone: observations, analysis and modelling (Plinius Medal Lecture)

    NASA Astrophysics Data System (ADS)

    Didenkulova, Ira

    2010-05-01

    Giant surface waves approaching the coast frequently cause extensive coastal flooding, destruction of coastal constructions and loss of lives. Such waves can be generated by various phenomena: strong storms and cyclones, underwater earthquakes, high-speed ferries, aerial and submarine landslides. The most famous examples of such events are the catastrophic tsunami in the Indian Ocean, which occurred on 26 December 2004 and hurricane Katrina (28 August 2005) in the Atlantic Ocean. The huge storm in the Baltic Sea on 9 January 2005, which produced unexpectedly long waves in many areas of the Baltic Sea and the influence of unusually high surge created by long waves from high-speed ferries, should also be mentioned as examples of regional marine natural hazards connected with extensive runup of certain types of waves. The processes of wave shoaling and runup for all these different marine natural hazards (tsunami, coastal freak waves, ship waves) are studied based on rigorous solutions of nonlinear shallow-water theory. The key and novel results presented here are: i) parameterization of basic formulas for extreme runup characteristics for bell-shape waves, showing that they weakly depend on the initial wave shape, which is usually unknown in real sea conditions; ii) runup analysis of periodic asymmetric waves with a steep front, as such waves are penetrating inland over large distances and with larger velocities than symmetric waves; iii) statistical analysis of irregular wave runup demonstrating that wave nonlinearity nearshore does not influence on the probability distribution of the velocity of the moving shoreline and its moments, and influences on the vertical displacement of the moving shoreline (runup). Wave runup on convex beaches and in narrow bays, which allow abnormal wave amplification is also discussed. Described analytical results are used for explanation of observed extreme runup of tsunami, freak (sneaker) waves and ship waves on different coasts

  3. Uncovering the volatile nature of tropical coastal marine ecosystems in a changing world.

    PubMed

    Exton, Dan A; McGenity, Terry J; Steinke, Michael; Smith, David J; Suggett, David J

    2015-04-01

    Biogenic volatile organic compounds (BVOCs), in particular dimethyl sulphide (DMS) and isoprene, have fundamental ecological, physiological and climatic roles. Our current understanding of these roles is almost exclusively established from terrestrial or oceanic environments but signifies a potentially major, but largely unknown, role for BVOCs in tropical coastal marine ecosystems. The tropical coast is a transition zone between the land and ocean, characterized by highly productive and biodiverse coral reefs, seagrass beds and mangroves, which house primary producers that are amongst the greatest emitters of BVOCs on the planet. Here, we synthesize our existing understanding of BVOC emissions to produce a novel conceptual framework of the tropical marine coast as a continuum from DMS-dominated reef producers to isoprene-dominated mangroves. We use existing and previously unpublished data to consider how current environmental conditions shape BVOC production across the tropical coastal continuum, and in turn how BVOCs can regulate environmental stress tolerance or species interactions via infochemical networks. We use this as a framework to discuss how existing predictions of future tropical coastal BVOC emissions, and the roles they play, are effectively restricted to present day 'baseline' trends of BVOC production across species and environmental conditions; as such, there remains a critical need to focus research efforts on BVOC responses to rapidly accelerating anthropogenic impacts at local and regional scales. We highlight the complete lack of current knowledge required to understand the future ecological functioning of these important systems, and to predict whether feedback mechanisms are likely to regulate or exacerbate current climate change scenarios through environmentally and ecologically mediated changes to BVOC budgets at the ecosystem level. PMID:25311223

  4. Coastal and Marine Spatial Planning - Efforts to Bring Law and Order to Ocean Areas

    NASA Astrophysics Data System (ADS)

    Duff, J. A.

    2011-12-01

    In recent years a number of coastal states have engaged in planning and resource stewardship efforts that go markedly beyond single sector resource-oriented management. In some cases, proponents of such efforts have laid claim to the banner of "first" in characterizing their respective ocean (and Great Lakes) management plans. In particular, California, Massachusetts, New York, Oregon, and Rhode Island have each engaged in coastal and marine spatial planning (CMSP) management approaches that can be characterized as "firsts" in one way or another. This project will outline the bases upon which these claims have been made. It will employ a set of five chronologies designed to inform policy-makers, researchers, resource users and the general public with the context and contents of various state ocean management regimes. For each state, the impetus, apparatus, and status of the state's ocean (and Great Lakes) planning efforts will be examined. In each case CMSP has been legally authorized by the state. But the construction and discretion related to those legal authorizations varies. We will also examine whether there are any early 'signals' suggesting that stricter statutory control of the principles and constraints of a state's coastal and marine spatial planning (CMSP) effort might provide political "insulation" to executive branch personnel charged with implementing such plans but that benefit will come at the expense of a loss of employing valuable expertise and discretion of executive branch administrators. The researchers will assess each state's CMSP apparatus, in detail, to identify how the five states exert legislative control over their respective CMSP efforts. To the degree that substantial variation is identified among the five states, researchers will examine the control-status relationship to see whether and how the level of legislative control may influence the sought after objectives of a given state's CMSP management endeavor.

  5. Marine bacterial community structure resilience to changes in protist predation under phytoplankton bloom conditions.

    PubMed

    Baltar, Federico; Palovaara, Joakim; Unrein, Fernando; Catala, Philippe; Horňák, Karel; Šimek, Karel; Vaqué, Dolors; Massana, Ramon; Gasol, Josep M; Pinhassi, Jarone

    2016-03-01

    To test whether protist grazing selectively affects the composition of aquatic bacterial communities, we combined high-throughput sequencing to determine bacterial community composition with analyses of grazing rates, protist and bacterial abundances and bacterial cell sizes and physiological states in a mesocosm experiment in which nutrients were added to stimulate a phytoplankton bloom. A large variability was observed in the abundances of bacteria (from 0.7 to 2.4 × 10(6) cells per ml), heterotrophic nanoflagellates (from 0.063 to 2.7 × 10(4) cells per ml) and ciliates (from 100 to 3000 cells per l) during the experiment (∼3-, 45- and 30-fold, respectively), as well as in bulk grazing rates (from 1 to 13 × 10(6) bacteria per ml per day) and bacterial production (from 3 to 379 μg per C l per day) (1 and 2 orders of magnitude, respectively). However, these strong changes in predation pressure did not induce comparable responses in bacterial community composition, indicating that bacterial community structure was resilient to changes in protist predation pressure. Overall, our results indicate that peaks in protist predation (at least those associated with phytoplankton blooms) do not necessarily trigger substantial changes in the composition of coastal marine bacterioplankton communities.

  6. Hydrologic signals and patterns in coastal mangrove communities using space-borne remote sensing

    NASA Astrophysics Data System (ADS)

    Lagomasino, D.; Price, R. M.

    2013-05-01

    The coastal mangrove ecotone, along the southern edge of the Florida Everglades, is the transition zone between the marine waters of the Gulf of Mexico and Florida Bay, and the freshwater from the "River of Grass". Hydrologically-dependent ecosystems, like the Florida Everglades, have been experiencing greater threats in the past decade from climate change, increased fresh water demand, and urban growth and development. Identifying changes to water chemistry and evapotranspiration (ET) over the coastal landscape is important to understanding the ecosystem response and adaptation with respect to environmental restoration projects, water management practices and sea-level rise. Space-borne remote sensing can be a cost-effective tool to remotely measure water chemistry and ET changes in remote areas of the coastal Everglades on a regional scale. The objectives of this research were to; 1) to measure surface and subsurface water chemistry by building relationships between satellite-based mangrove reflectance data and the ionic and nutrient concentrations in the surface water and groundwater across the coastal mangrove ecotone; and 2) to estimate ET across the coastal everglades. Water chemistry and Landsat 5TM satellite data were used to develop a linear model to quantitatively predict water chemistry on the landscape scale within the coastal mangrove communities of south Florida on seasonal and annual timescales. A satellite-based energy balance approach was used to determine regional scale ET estimates. Using this satellite-energy balance approach, we were able to account for the spatial variability in surface temperature, changes in albedo, and vegetation reflectance. Water samples were collected from the surface water and groundwater from five Long-term Ecological Research (LTER) sites that spanned a variety of mangrove communities and biomass production. Surface water samples were collected from 2008-2012 and groundwater samples were collected from 2009-2012. All

  7. Metaproteomic analysis of bacterial communities in marine mudflat aquaculture sediment.

    PubMed

    Lin, Rui; Lin, Xiangmin; Guo, Tingting; Wu, Linkun; Zhang, Wenjing; Lin, Wenxiong

    2015-09-01

    Bacteria living in marine sediment play crucial roles in the benthic-pelagic interface coupling process. However, the complexity of the marine environment and the abundance of interfering materials hamper metaproteomic research of the marine mudflat environment. In this study, a modified sequential protein extraction method was used for marine mudflat sediment metaproteomic investigation. For marine sediment samples in cultured clam mudflat, more than 1000 protein spots were visualized in a two-dimensional gel electrophoresis map and 78 % of 194 randomly selected spots were successfully identified by mass spectrometry. We further applied this method to compare long-term clam aquaculture and natural mudflat sediment and identified 53 altered proteins from different microbe resources, which belonged to different functional categories or metabolic pathways. We found that proteins involved in stress/defense response process, ATP regeneration and protein folding more inclined to increase abundance while arginine biosynthesis and signal transduction process related proteins preferred to decrease in clam cultured mudflat sediment. Meanwhile, proteins were abundant in pathogens of bivalves, such as Vibrio and Photobacterium, and decreased in Acinetobacter, after about 8 months clam cultured. Furthermore, the terminal restriction fragment length polymorphism assay was performed to compare microbial community composition between sediments mentioned above. Results showed that the top three enrich genera in natural sediment were Cytophaga, Butyrivibrio and Spirochaeta, while Cytophaga, Spirochaeta and Azoarcus were found enrichment in long-term mudflat aquaculture sediment.

  8. Spring bloom community change modifies carbon pathways and C : N : P : Chl a stoichiometry of coastal material fluxes

    NASA Astrophysics Data System (ADS)

    Spilling, K.; Kremp, A.; Klais, R.; Olli, K.; Tamminen, T.

    2014-08-01

    Diatoms and dinoflagellates are major bloom-forming phytoplankton groups competing for resources in the oceans and coastal seas. Recent evidence suggests that their competition is significantly affected by climatic factors under ongoing change, modifying especially the conditions for cold-water, spring bloom communities in temperate and arctic regions. We investigated the effects of phytoplankton community composition on spring bloom carbon flows and nutrient stoichiometry in multi-year mesocosm experiments. Comparison of differing communities showed that community structure significantly affected C accumulation parameters, with highest particulate organic carbon (POC) build-up and dissolved organic carbon (DOC) release in diatom-dominated communities. In terms of inorganic nutrient drawdown and bloom accumulation phase, the dominating groups behaved as functional surrogates. Dominance patterns, however, significantly affected C : N : P : Chl a ratios over the whole bloom event: when diatoms were dominant, these ratios increased compared to dinoflagellate dominance or mixed communities. Diatom-dominated communities sequestered carbon up to 3.6-fold higher than the expectation based on the Redfield ratio, and 2-fold higher compared to dinoflagellate dominance. To our knowledge, this is the first experimental report of consequences of climatically driven shifts in phytoplankton dominance patterns for carbon sequestration and related biogeochemical cycles in coastal seas. Our results also highlight the need for remote sensing technologies with taxonomical resolution, as the C : Chl a ratio was strongly dependent on community composition and bloom stage. Climate-driven changes in phytoplankton dominance patterns will have far-reaching consequences for major biogeochemical cycles and need to be considered in climate change scenarios for marine systems.

  9. Spring bloom community change modifies carbon pathways and C : N : P : Chl a stoichiometry of coastal material fluxes

    NASA Astrophysics Data System (ADS)

    Spilling, K.; Kremp, A.; Klais, R.; Olli, K.; Tamminen, T.

    2014-12-01

    Diatoms and dinoflagellates are major bloom-forming phytoplankton groups competing for resources in the oceans and coastal seas. Recent evidence suggests that their competition is significantly affected by climatic factors under ongoing change, modifying especially the conditions for cold-water, spring bloom communities in temperate and Arctic regions. We investigated the effects of phytoplankton community composition on spring bloom carbon flows and nutrient stoichiometry in multiyear mesocosm experiments. Comparison of differing communities showed that community structure significantly affected C accumulation parameters, with highest particulate organic carbon (POC) buildup and dissolved organic carbon (DOC) release in diatom-dominated communities. In terms of inorganic nutrient drawdown and bloom accumulation phase, the dominating groups behaved as functional surrogates. Dominance patterns, however, significantly affected C : N : P : Chl a ratios over the whole bloom event: when diatoms were dominant, these ratios increased compared to dinoflagellate dominance or mixed communities. Diatom-dominated communities sequestered carbon up to 3.6-fold higher than the expectation based on the Redfield ratio, and 2-fold higher compared to dinoflagellate dominance. To our knowledge, this is the first experimental report of consequences of climatically driven shifts in phytoplankton dominance patterns for carbon sequestration and related biogeochemical cycles in coastal seas. Our results also highlight the need for remote sensing technologies with taxonomical resolution, as the C : Chl a ratio was strongly dependent on community composition and bloom stage. Climate-driven changes in phytoplankton dominance patterns will have far-reaching consequences for major biogeochemical cycles and need to be considered in climate change scenarios for marine systems.

  10. The kelp highway hypothesis: marine ecology, the coastal migration theory, and the peopling of the Americas

    USGS Publications Warehouse

    Erlandson, Jon M.; Graham, Michael H.; Bourque, Bruce J.; Corbett, Debra; Estes, James A.; Steneck, Robert S.

    2007-01-01

    In this article, a collaborative effort between archaeologists and marine ecologists, we discuss the role kelp forest ecosystems may have played in facilitating the movement of maritime peoples from Asia to the Americas near the end of the Pleistocene. Growing in cool nearshore waters along rocky coastlines, kelp forests offer some of the most productive habitats on earth, with high primary productivity, magnified secondary productivity, and three-dimensional habitat supporting a diverse array of marine organisms. Today, extensive kelp forests are found around the North Pacific from Japan to Baja California. After a break in the tropicswhere nearshore mangrove forests and coral reefs are highly productivekelp forests are also found along the Andean Coast of South America. These Pacific Rim kelp forests support or shelter a wealth of shellfish, fish, marine mammals, seabirds, and seaweeds, resources heavily used historically by coastal peoples. By about 16,000 years ago, the North Pacific Coast offered a linear migration route, essentially unobstructed and entirely at sea level, from northeast Asia into the Americas. Recent reconstructions suggest that rising sea levels early in the postglacial created a highly convoluted and island-rich coast along Beringia's southern shore, conditions highly favorable to maritime hunter-gatherers. Along with the terrestrial resources available in adjacent landscapes, kelp forests and other nearshore habitats sheltered similar suites of food resources that required minimal adaptive adjustments for migrating coastal peoples. With reduced wave energy, holdfasts for boats, and productive fishing, these linear kelp forest ecosystems may have provided a kind of kelp highway for early maritime peoples colonizing the New World.

  11. The Seasonality of California Coastal Marine Layer Clouds from a New Satellite-Derived Dataset

    NASA Astrophysics Data System (ADS)

    Schwartz, R. E.; Gershunov, A.; Iacobellis, S.; Cayan, D. R.

    2013-12-01

    Low coastal stratiform clouds (typically stratus and fog), referred to here as marine layer clouds (MLCs), are a persistent seasonal feature of coastal California (CA). We have created a novel record of MLC spatial extent for CA and the near-shore waters utilizing NASA/NOAA Geostationary Operational Environmental Satellite (GOES). The low cloud satellite retrieval is optimized and validated against coastal airport cloud observations and is shown to be of excellent quality. The record spans 17 summers and is rich in its spatial (4 km) and temporal (half hourly day and night) resolution. This new data provides a detailed record of MLC variability on diurnal, intra-seasonal, and interannual time scales since 1997. The data reveal that MLC in the Southern California Bight has a greater inland and offshore diurnal movement than the MLC in central and northern CA. Differences also emerge in the seasonality of cloudiness. Seasonal peak MLC cover along the southern California coast is part of a tongue of high early summer cloud cover that extends to the southwest, while peak MLC in later summer along central and northern California is a pattern that occurs broadly in the offshore California region. The data indicates there is interesting differences in seasonal variability that operate diurnally over southern CA and central and northern CA coastal regions. These climatological tendencies are overlain by considerable spatial and temporal variation from synoptic to interannual time scales, which are also under investigation. Satellite retrieval findings are supported by airport cloud observations since 1950. Focusing first on the intricate structure of the seasonal cycle, we then begin to describe and quantify synoptic weather and large scale climatic controls on the finely resolved space-time variability of MLCs.

  12. Remnants of marine bacterial communities can be retrieved from deep sediments in lakes of marine origin.

    PubMed

    Langenheder, Silke; Comte, Jérôme; Zha, Yinghua; Samad, Md Sainur; Sinclair, Lucas; Eiler, Alexander; Lindström, Eva S

    2016-08-01

    Some bacteria can be preserved over time in deep sediments where they persist either in dormant or slow-growing vegetative stages. Here, we hypothesized that such cells can be revived when exposed to environmental conditions similar to those before they were buried in the sediments. To test this hypothesis, we collected bacteria from sediment samples of different ages (140-8500 calibrated years before present, cal BP) from three lakes that differed in the timing of their physical isolation from the Baltic Sea following postglacial uplift. After these bacterial communities were grown in sterile water from the Baltic Sea, we determined the proportion of 16S rRNA sequence reads associated with marine habitats by extracting the environment descriptive terms of homologous sequences retrieved from public databases. We found that the proportion of reads associated with marine descriptive term was significantly higher in cultures inoculated with sediment layers formed under Baltic conditions and where salinities were expected to be similar to current levels. Moreover, a similar pattern was found in the original sediment layers. Our study, therefore, suggests that remnants of marine bacterial communities can be preserved in sediments over thousands of years and can be revived from deep sediments in lakes of marine origin.

  13. Remnants of marine bacterial communities can be retrieved from deep sediments in lakes of marine origin.

    PubMed

    Langenheder, Silke; Comte, Jérôme; Zha, Yinghua; Samad, Md Sainur; Sinclair, Lucas; Eiler, Alexander; Lindström, Eva S

    2016-08-01

    Some bacteria can be preserved over time in deep sediments where they persist either in dormant or slow-growing vegetative stages. Here, we hypothesized that such cells can be revived when exposed to environmental conditions similar to those before they were buried in the sediments. To test this hypothesis, we collected bacteria from sediment samples of different ages (140-8500 calibrated years before present, cal BP) from three lakes that differed in the timing of their physical isolation from the Baltic Sea following postglacial uplift. After these bacterial communities were grown in sterile water from the Baltic Sea, we determined the proportion of 16S rRNA sequence reads associated with marine habitats by extracting the environment descriptive terms of homologous sequences retrieved from public databases. We found that the proportion of reads associated with marine descriptive term was significantly higher in cultures inoculated with sediment layers formed under Baltic conditions and where salinities were expected to be similar to current levels. Moreover, a similar pattern was found in the original sediment layers. Our study, therefore, suggests that remnants of marine bacterial communities can be preserved in sediments over thousands of years and can be revived from deep sediments in lakes of marine origin. PMID:26929161

  14. University of Alaska Coastal Marine Institute annual report number 5, fiscal year 1998

    SciTech Connect

    Alexander, V.

    1998-12-18

    The University of Alaska Coastal Marine Institute (CMI) was created by a cooperative agreement between the University of Alaska and the Minerals Management Service (MMS) in June 1993 and the first full funding cycle began late in (federal) fiscal year 1994. CMI is pleased to present this 1998 Annual Report for studies ongoing in Oct 1997--Sep 1998. Only abstracts and study products for ongoing projects are included here. They include: An Economic Assessment of the Marine Biotechnology; Kachemak Bay Experimental and Monitoring Studies; Historical Changes in Trace Metals and Hydrocarbons in the Inner Shelf Sediments; Beaufort Sea: Prior and Subsequent to Petroleum-Related Industrial Developments; Physical-Biological Numerical Modeling on Alaskan Arctic Shelves; Defining Habitats for Juvenile Flatfishes in Southcentral Alaska; Relationship of Diet to Habitat Preferences of Juvenile Flatfishes, Phase 1; Subsistence Economies and North Slope Oil Development; Wind Field Representations and Their Effect on Shelf Circulation Models: A Case Study in the Chukchi Sea; Interaction between Marine Humic Matter and Polycyclic Aromatic Hydrocarbons in Lower Cook Inlet and Port Valdez, Alaska; Correction Factor for Ringed Seal Surveys in Northern Alaska; Feeding Ecology of Maturing Sockeye Salmon (Oncorhynchus nerka) in Nearshore Waters of the Kodiak Archipelago; and Circulation, Thermohaline Structure, and Cross-Shelf Transport in the Alaskan Beaufort Sea.

  15. Visible and infrared extinction of atmospheric aerosol in the marine and coastal environment.

    PubMed

    Kaloshin, Gennady A

    2011-05-10

    The microphysical model Marine Aerosol Extinction Profiles (MaexPro) for surface layer marine and coastal atmospheric aerosols, which is based on long-term observations of size distributions for 0.01-100 μm particles, is presented. The fundamental feature of the model is a parameterization of amplitudes and widths for aerosol modes of the aerosol size distribution function (ASDF) as functions of fetch and wind speed. The shape of the ASDF and its dependence on meteorological parameters, altitudes above the sea level (H), fetch (X), wind speed (U), and relative humidity is investigated. The model is primarily to characterize aerosols for the near-surface layer (within 25 m). The model is also applicable to higher altitudes within the atmospheric boundary layer, where the change in the vertical profile of aerosol is not very large. In this case, it is only valid for "clean" marine environments, in the absence of air pollution or any other major sources of continental aerosols, such desert dust or smoke from biomass burning. The spectral profiles of the aerosol extinction coefficients calculated by MaexPro are in good agreement with observational data and the numerical results obtained by the well-known Navy Aerosol Model and Advanced Navy Aerosol Model codes. Moreover, MaexPro was found to be an accurate and reliable instrument for investigation of the optical properties of atmospheric aerosols. PMID:21556113

  16. Dispersal Patterns of Coastal Fish: Implications for Designing Networks of Marine Protected Areas

    PubMed Central

    Di Franco, Antonio; Gillanders, Bronwyn M.; De Benedetto, Giuseppe; Pennetta, Antonio; De Leo, Giulio A.; Guidetti, Paolo

    2012-01-01

    Information about dispersal scales of fish at various life history stages is critical for successful design of networks of marine protected areas, but is lacking for most species and regions. Otolith chemistry provides an opportunity to investigate dispersal patterns at a number of life history stages. Our aim was to assess patterns of larval and post-settlement (i.e. between settlement and recruitment) dispersal at two different spatial scales in a Mediterranean coastal fish (i.e. white sea bream, Diplodus sargus sargus) using otolith chemistry. At a large spatial scale (∼200 km) we investigated natal origin of fish and at a smaller scale (∼30 km) we assessed “site fidelity” (i.e. post-settlement dispersal until recruitment). Larvae dispersed from three spawning areas, and a single spawning area supplied post-settlers (proxy of larval supply) to sites spread from 100 to 200 km of coastline. Post-settlement dispersal occurred within the scale examined of ∼30 km, although about a third of post-settlers were recruits in the same sites where they settled. Connectivity was recorded both from a MPA to unprotected areas and vice versa. The approach adopted in the present study provides some of the first quantitative evidence of dispersal at both larval and post-settlement stages of a key species in Mediterranean rocky reefs. Similar data taken from a number of species are needed to effectively design both single marine protected areas and networks of marine protected areas. PMID:22355388

  17. Visible and infrared extinction of atmospheric aerosol in the marine and coastal environment.

    PubMed

    Kaloshin, Gennady A

    2011-05-10

    The microphysical model Marine Aerosol Extinction Profiles (MaexPro) for surface layer marine and coastal atmospheric aerosols, which is based on long-term observations of size distributions for 0.01-100 μm particles, is presented. The fundamental feature of the model is a parameterization of amplitudes and widths for aerosol modes of the aerosol size distribution function (ASDF) as functions of fetch and wind speed. The shape of the ASDF and its dependence on meteorological parameters, altitudes above the sea level (H), fetch (X), wind speed (U), and relative humidity is investigated. The model is primarily to characterize aerosols for the near-surface layer (within 25 m). The model is also applicable to higher altitudes within the atmospheric boundary layer, where the change in the vertical profile of aerosol is not very large. In this case, it is only valid for "clean" marine environments, in the absence of air pollution or any other major sources of continental aerosols, such desert dust or smoke from biomass burning. The spectral profiles of the aerosol extinction coefficients calculated by MaexPro are in good agreement with observational data and the numerical results obtained by the well-known Navy Aerosol Model and Advanced Navy Aerosol Model codes. Moreover, MaexPro was found to be an accurate and reliable instrument for investigation of the optical properties of atmospheric aerosols.

  18. Shifting sources of productivity in the coastal marine tropics during the Cenozoic era.

    PubMed

    Vermeij, Geerat J

    2011-08-01

    Changes in the rates and sources of marine primary production over time are difficult to document owing to the absence of direct estimates of past productivity. Here, I use the maximum body sizes of the largest species in each of 23 tropical shallow-water marine molluscan guilds (groups of species with similar habits and trophic roles) to trace the relative importance of planktonic and benthic primary productivity from the Eocene (55 Ma) onwards. The largest members of guilds are least constrained in exploiting resources and therefore reflect the availability and accessibility of those resources most accurately. Maximum sizes of suspension-feeders and predators increased by a factor of 2.3 and 4.0, respectively, whereas those in four out of five herbivorous guilds declined. I interpret these patterns, which are discernible throughout the coastal tropics, to mean that primary production in the Eocene marine tropics was concentrated on the seafloor, as is the case today on offshore reefs and islands, and that the Miocene to the recent interval witnessed a dramatic increase in planktonic productivity along continental margins. The rise in planktonic fertility is best explained by an increase in nutrient supply from the land associated with intense global tectonic activity and more vigorous ocean mixing owing to cooling.

  19. Dispersal patterns of coastal fish: implications for designing networks of marine protected areas.

    PubMed

    Di Franco, Antonio; Gillanders, Bronwyn M; De Benedetto, Giuseppe; Pennetta, Antonio; De Leo, Giulio A; Guidetti, Paolo

    2012-01-01

    Information about dispersal scales of fish at various life history stages is critical for successful design of networks of marine protected areas, but is lacking for most species and regions. Otolith chemistry provides an opportunity to investigate dispersal patterns at a number of life history stages. Our aim was to assess patterns of larval and post-settlement (i.e. between settlement and recruitment) dispersal at two different spatial scales in a Mediterranean coastal fish (i.e. white sea bream, Diplodus sargus sargus) using otolith chemistry. At a large spatial scale (∼200 km) we investigated natal origin of fish and at a smaller scale (∼30 km) we assessed "site fidelity" (i.e. post-settlement dispersal until recruitment). Larvae dispersed from three spawning areas, and a single spawning area supplied post-settlers (proxy of larval supply) to sites spread from 100 to 200 km of coastline. Post-settlement dispersal occurred within the scale examined of ∼30 km, although about a third of post-settlers were recruits in the same sites where they settled. Connectivity was recorded both from a MPA to unprotected areas and vice versa. The approach adopted in the present study provides some of the first quantitative evidence of dispersal at both larval and post-settlement stages of a key species in Mediterranean rocky reefs. Similar data taken from a number of species are needed to effectively design both single marine protected areas and networks of marine protected areas. PMID:22355388

  20. The composition of nucleation and Aitken modes particles during coastal nucleation events: evidence for marine secondary organic contribution

    NASA Astrophysics Data System (ADS)

    Vaattovaara, P.; Huttunen, P. E.; Yoon, Y. J.; Joutsensaari, J.; Lehtinen, K. E. J.; O'Dowd, C. D.; Laaksonen, A.

    2006-04-01

    Newly-formed nanometer-sized particles have been observed at coastal and marine environments worldwide. Interestingly, organic species have so far not been detected in those newly-formed nucleation mode particles. In this study, we applied the UFO-TDMA (ultrafine organic tandem differential mobility analyzer) method to study the possible existence of an organic fraction in recently formed coastal nucleation mode particles (d<20 nm) at the Mace Head research station. Furthermore, effects of those nucleation events to potential CCN (cloud condensation nuclei) were studied. The coastal events were typical for the Mace Head region and they occurred at low tide conditions during efficient solar radiation and high biological activity (HBA, i.e. a high mass concentration of chlorophyll a of the ocean) in spring 2002. Additionally, a PHA-UCPC (pulse height analyzer ultrafine condensation particle counter) technique was used to study the composition of newly-formed particles formed in low tide conditions during a lower biological activity (LBA, i.e. a lower mass concentration of chlorophyll a of the ocean) in October 2002. The overall results of the UFO-TDMA and the PHA-UCPC measurements indicate that those coastally/marinely formed nucleation mode particles include a remarkable fraction of secondary organic products, beside iodine oxides, which are likely to be responsible for the nucleation. During clean marine air mass conditions, the origin of those secondary organic oxidation compounds can be related to marine/coastal biota and thus a major fraction of the organics may originate from biosynthetic production of alkenes such as isoprene and their oxidation by iodine, hydroxyl radical, and ozone. During modified marine conditions, also anthropogenic secondary organic compounds may contribute to the nucleation mode organic mass, in addition to biogenic secondary organic compounds. Thus, the UFO-TDMA results suggest that the secondary organic compounds may, in addition to

  1. Spillover Effects of a Community-Managed Marine Reserve

    PubMed Central

    da Silva, Isabel Marques; Hill, Nick; Shimadzu, Hideyasu; Soares, Amadeu M. V. M.; Dornelas, Maria

    2015-01-01

    The value of no-take marine reserves as fisheries-management tools is controversial, particularly in high-poverty areas where human populations depend heavily on fish as a source of protein. Spillover, the net export of adult fish, is one mechanism by which no-take marine reserves may have a positive influence on adjacent fisheries. Spillover can contribute to poverty alleviation, although its effect is modulated by the number of fishermen and fishing intensity. In this study, we quantify the effects of a community-managed marine reserve in a high poverty area of Northern Mozambique. For this purpose, underwater visual censuses of reef fish were undertaken at three different times: 3 years before (2003), at the time of establishment (2006) and 6 years after the marine reserve establishment (2012). The survey locations were chosen inside, outside and on the border of the marine reserve. Benthic cover composition was quantified at the same sites in 2006 and 2012. After the reserve establishment, fish sizes were also estimated. Regression tree models show that the distance from the border and the time after reserve establishment were the variables with the strongest effect on fish abundance. The extent and direction of the spillover depends on trophic group and fish size. Poisson Generalized Linear Models show that, prior to the reserve establishment, the survey sites did not differ but, after 6 years, the abundance of all fish inside the reserve has increased and caused spillover of herbivorous fish. Spillover was detected 1km beyond the limit of the reserve for small herbivorous fishes. Six years after the establishment of a community-managed reserve, the fish assemblages have changed dramatically inside the reserve, and spillover is benefitting fish assemblages outside the reserve. PMID:25927235

  2. Tropical coastal habitats as surrogates of fish community structure, grazing, and fisheries value.

    PubMed

    Harborne, Alastair R; Mumby, Peter J; Kappel, Carrie V; Dahlgren, Craig P; Micheli, Fiorenza; Holmes, Katherine E; Brumbaugh, Daniel R

    2008-10-01

    Habitat maps are frequently invoked as surrogates of biodiversity to aid the design of networks of marine reserves. Maps are used to maximize habitat heterogeneity in reserves because this is likely to maximize the number of species protected. However, the technique's efficacy is limited by intra-habitat variability in the species present and their abundances. Although communities are expected to vary among patches of the same habitat, this variability is poorly documented and rarely incorporated into reserve planning. To examine intra-habitat variability in coral-reef fishes, we generated a data set from eight tropical coastal habitats and six islands in the Bahamian archipelago using underwater visual censuses. Firstly, we provide further support for habitat heterogeneity as a surrogate of biodiversity as each predefined habitat type supported a distinct assemblage of fishes. Intra-habitat variability in fish community structure at scales of hundreds of kilometers (among islands) was significant in at least 75% of the habitats studied, depending on whether presence/absence, density, or biomass data were used. Intra-habitat variability was positively correlated with the mean number of species in that habitat when density and biomass data were used. Such relationships provide a proxy for the assessment of intra-habitat variability when detailed quantitative data are scarce. Intra-habitat variability was examined in more detail for one habitat (forereefs visually dominated by Montastraea corals). Variability in community structure among islands was driven by small, demersal families (e.g., territorial pomacentrid and labrid fishes). Finally, we examined the ecological and economic significance of intra-habitat variability in fish assemblages on Montastraea reefs by identifying how this variability affects the composition and abundances of fishes in different functional groups, the key ecosystem process of parrotfish grazing, and the ecosystem service of value of

  3. Phytoplankton community structure in local water types at a coastal site in north-western Bay of Bengal.

    PubMed

    Baliarsingh, S K; Srichandan, Suchismita; Lotliker, Aneesh A; Sahu, K C; Srinivasa Kumar, T

    2016-07-01

    A comprehensive analysis on seasonal distribution of phytoplankton community structure and their interaction with environmental variables was carried out in two local water types (type 1 < 30 m isobath and Type 2 > 30 m isobath) at a coastal site in north-western Bay of Bengal. Phytoplankton community was represented by 211 taxa (146 marine, 37 fresh, 2 brackish, 20 marine-fresh, and 6 marine-brackish-fresh) belonging to seven major groups including 45 potential bloom forming and 22 potential toxin producing species. The seasonal variability depicted enrichment of phytoplankton during pre-monsoon in both water types. Total phytoplankton abundance pattern observed with inter-annual shift during monsoon and post-monsoon period at both water types. In both water types, diatom predominance was observed in terms of species richness and abundance comprising of centric (82 sp.) and pennate (58 sp.) forms. Pennate diatoms, Thalassiothrix longissima and Skeletonema costatum preponderated in both the water types. The diatom abundance was higher in type 1 in comparison to type 2. In general, SiO4 found to fuel growth of the dominant phytoplankton group, diatom in both the water types despite comparative lower concentration of other macronutrients in type 2. PMID:27334343

  4. Phytoplankton community structure in local water types at a coastal site in north-western Bay of Bengal.

    PubMed

    Baliarsingh, S K; Srichandan, Suchismita; Lotliker, Aneesh A; Sahu, K C; Srinivasa Kumar, T

    2016-07-01

    A comprehensive analysis on seasonal distribution of phytoplankton community structure and their interaction with environmental variables was carried out in two local water types (type 1 < 30 m isobath and Type 2 > 30 m isobath) at a coastal site in north-western Bay of Bengal. Phytoplankton community was represented by 211 taxa (146 marine, 37 fresh, 2 brackish, 20 marine-fresh, and 6 marine-brackish-fresh) belonging to seven major groups including 45 potential bloom forming and 22 potential toxin producing species. The seasonal variability depicted enrichment of phytoplankton during pre-monsoon in both water types. Total phytoplankton abundance pattern observed with inter-annual shift during monsoon and post-monsoon period at both water types. In both water types, diatom predominance was observed in terms of species richness and abundance comprising of centric (82 sp.) and pennate (58 sp.) forms. Pennate diatoms, Thalassiothrix longissima and Skeletonema costatum preponderated in both the water types. The diatom abundance was higher in type 1 in comparison to type 2. In general, SiO4 found to fuel growth of the dominant phytoplankton group, diatom in both the water types despite comparative lower concentration of other macronutrients in type 2.

  5. Location, Location, Location: Management Uses of Marine Benthic Biogeographical Information in Coastal Waters of the Northeastern USA

    EPA Science Inventory

    Ecosystem-based management practices, along with coastal and marine spatial planning, have been adopted as foundational principles for ocean management in the United States. The success of these practices depends in large measure on a solid foundation of biogeographical informati...

  6. On the Response of pH to Inorganic Nutrient Enrichment in Well-Mixed Coastal Marine Waters

    EPA Science Inventory

    Recent concerns about declining pH in the surface ocean in response to anthropogenic increases of CO2 in the atmosphere have raised the question of how this declining baseline of oceanic pH might interact with the much larger diel and seasonal variations of pH in coastal marine e...

  7. Phytoplankton Communities in Louisiana coastal waters and the continental shelf

    EPA Science Inventory

    Louisiana coastal waters and the adjacent continental shelf receive large freshwater and nutrient inputs from the Mississippi and Atchafalaya Rivers, creating favorable conditions for increased phytoplankton productivity. To examine inshore-offshore patterns in phytoplankton comm...

  8. High resolution numerical wave propagation in coastal area : benefits in assessment of the marine submersion

    NASA Astrophysics Data System (ADS)

    Dorville, Jean-François; Cayol, Claude; Palany, Philippe

    2016-04-01

    Many numerical models based on equation of action conservation (N = E/σ) enables the simulation of sea states (WAM, WW3,...). They allow through parametric equations to define sources and sinks of wave energy (E(f,σ)) in spectral form. Statistics of the sea states can be predicted at medium or long term as the significant wave height, the wave pic direction, mean wave period, etc. Those predictions are better if initials and boundaries conditions together with 10m wind field are well defined. Basically the more homogeneous the marine area bathymetry is the more accurate the prediction will be. Météo-France for French West Indies and French Guiana (MF-DIRAG) is in charge of the safety of persons and goods tries to improve knowledge and capacity to evaluate the sea state at the coast and the marine submersion height using among other statistical methods (as return periods) and numerical simulations. The area of responsibility is large and includes different territory, type of coast and sea wave climate. Up today most part of the daily simulations were done for large areas and with large meshes (10km). The needs of more accurate values in the assessment of the marine submersion pushed to develop new strategies to estimate the level of the sea water on the coast line and therefore characterize the marine submersion hazard. Since 2013 new data are available to enhance the capacity to simulate the mechanical process at the coast. High resolution DEM Litto 3D for Guadeloupe and Martinique coasts with grid-spacing of 5m up to 5km of the coast are free of use. The study presents the methodology applied at MF-DIRAG in study mode to evaluate effects of wave breaking on coastline. The method is based on wave simulation downscaling form the Atlantic basin to the coastal area using MF-WAM to an sub kilometric unstructured WW3 or SWAN depending to the domain studied. At the final step a non-hydrostatic wave flow as SWASH is used on the coast completed by an analytical method

  9. Nitrogen fixation and the diazotroph community in the temperate coastal region of the northwestern North Pacific

    NASA Astrophysics Data System (ADS)

    Shiozaki, T.; Nagata, T.; Ijichi, M.; Furuya, K.

    2015-08-01

    Nitrogen fixation in temperate oceans is a potentially important, but poorly understood process that may influence the marine nitrogen budget. This study determined seasonal variations in nitrogen fixation and the diazotroph community within the euphotic zone in the temperate coastal region of the northwestern North Pacific. Nitrogen fixation as high as 13.6 nmol N L-1 d-1 was measured from early summer to fall when the surface temperature exceeded 14.2 °C (but was lower than 24.3 °C) and the surface nitrate concentration was low (≤ 0.30 μM), although we also detected nitrogen fixation in subsurface layers (42-62 m) where nitrate concentrations were high (> 1 μM). Clone library analysis results indicated that nifH gene sequences were omnipresent throughout the investigation period. During the period when nitrogen fixation was detected (early summer to fall), the genes affiliated with UCYN-A, Trichodesmium, and γ-proteobacterial phylotype γ-24774A11 were frequently recovered. In contrast, when nitrogen fixation was undetectable (winter to spring), many sequences affiliated with Cluster III diazotrophs (putative anaerobic bacteria) were recovered. Quantitative PCR analysis revealed that UCYN-A was relatively abundant from early to late summer compared with Trichodesmium and γ-24774A11, whereas Trichodesmium abundance was the highest among the three groups during fall.

  10. Assessing societal vulnerability of U.S. Pacific Northwest communities to storm-induced coastal change

    USGS Publications Warehouse

    Baron, Heather M.; Wood, Nathan J.; Ruggerio, Peter; Allan, Jonathan; Corcoran, Patrick

    2010-01-01

    Progressive increases in storm intensities and extreme wave heights have been documented along the U.S. West Coast. Paired with global sea level rise and the potential for an increase in El Niño occurrences, these trends have substantial implications for the vulnerability of coastal communities to natural coastal hazards. Community vulnerability to hazards is characterized by the exposure, sensitivity, and adaptive capacity of human-environmental systems that influence potential impacts. To demonstrate how societal vulnerability to coastal hazards varies with both physical and social factors, we compared community exposure and sensitivity to storm-induced coastal change scenarios in Tillamook (Oregon) and Pacific (Washington) Counties. While both are backed by low-lying coastal dunes, communities in these two counties have experienced different shoreline change histories and have chosen to use the adjacent land in different ways. Therefore, community vulnerability varies significantly between the two counties. Identifying the reasons for this variability can help land-use managers make decisions to increase community resilience and reduce vulnerability in spite of a changing climate.

  11. Effects of dredged sediment disposal on the coastal marine macrobenthic assemblage in Southern Brazil.

    PubMed

    Angonesi, L G; Bemvenuti, C E; Gandra, M S

    2006-05-01

    The aim of this study was to evaluate the deposition impact of dredged material from Patos lagoon estuary on a benthic macroinvertebrate assemblage structure in an adjacent coastal marine area. Nine sampling stations were chosen at random in the disposal area, and nine others in the same way in an adjacent control area. Samples were collected at a 19 m depth before sediment disposal (11 July 2000), during dredging and disposal operations (25 Oct. 2000), and three months thereafter (24 Aug. 2001). Statistical analysis indicated that sampling periods presented similar characteristics in both the control and disposal sites. Disposal of dredged sediment from Patos lagoon had no detectable detrimental effects upon macrobenthic faunal assemblage at the dumping site. This result is attributed both to adaptation of resident biota to dynamic sedimentary conditions and to the fine estuarine sediment dredged, the dispersion of which in the water column might have minimized sediment deposition and consequent damage to the benthic fauna. PMID:16862294

  12. Holocene melt-water variations recorded in Antarctic coastal marine benthic assemblages

    SciTech Connect

    Berkman, P.A.

    1992-03-01

    Climate changes can influence the input of meltwater from the polar ice sheets. In Antarctica, signatures of meltwater input during the Holocene may be recorded in the benthic fossils which exist at similar altitudes above sea level in emerged beaches around the continent Interpreting the fossils as meltwater proxy records would be enhanced by understanding the modern ecology of the species in adjacent marine environments. Characteristics of an extant scallop assemblage in West McMurdo Sound, Antarctica, have been evaluated across a summer meltwater gradient to provide examples of meltwater records that may be contained in proximal scallop fossils. Integrating environmental proxies from coastal benthic assemblages around Antarctica, over ecological and geological time scales, is a necessary step in evaluating the marginal responses of the ice sheets to climate changes during the Holocene.

  13. Proceedings of a Coastal and Marine Spatial Planning Workshop for the Western United States

    USGS Publications Warehouse

    Thorsteinson, Lyman; Hirsch, Derrick; Helweg, David; Dhanju, Amardeep; Barmenski, Joan; Ferrero, Richard

    2011-01-01

    Recent scientific and ocean policy assessments demonstrate that a fundamental change in our current management system is required to achieve the long-term health of our ocean, coasts, and Great Lakes in order to sustain the services and benefits they provide to society. The present (2011) species- and sector-centric way we manage these ecosystems cannot account properly for cumulative effects, sustaining multiple ecosystem services, and holistically and explicitly evaluating the tradeoffs associated with proposed alternative and multiple human uses. A transition to an ecosystem-based approach to management and conservation of coastal and marine resources is needed. Competing uses and activities such as commerce, recreation, cultural practices, energy development, conservation, and national security are increasing pressure for new and expanded resource usage in coastal marine ecosystems. Current management efforts use a sector-by-sector approach that mostly focuses on a limited range of tools and outcomes [for example, oil and gas leases, fishery management plans, and Marine Protected Areas (MPAs)]. A comprehensive, ecosystem-based, and proactive approach to planning and managing these uses and activities is needed. Further, scientific understanding and information are essential to achieve an integrated decision-making process that includes knowledge of ecosystem services, existing and possible future conditions, and potential consequences of natural and anthropogenic events. Because no single government agency has executive authority for coastal or ocean resources, conflicting objectives around competing uses abound. In recent years, regional- and state-level initiatives in Coastal and Marine Spatial Planning (CMSP) have emerged to coordinate management activities. In some respects, the components and steps of the overall CMSP process are similar to how existing ocean resources are regulated and managed. For example, the Bureau of Ocean Energy Management Regulation

  14. Current Status and Future Prospects for the Assessment of Marine and Coastal Ecosystem Services: A Systematic Review

    PubMed Central

    Liquete, Camino; Piroddi, Chiara; Drakou, Evangelia G.; Gurney, Leigh; Katsanevakis, Stelios; Charef, Aymen; Egoh, Benis

    2013-01-01

    Background Research on ecosystem services has grown exponentially during the last decade. Most of the studies have focused on assessing and mapping terrestrial ecosystem services highlighting a knowledge gap on marine and coastal ecosystem services (MCES) and an urgent need to assess them. Methodology/Principal Findings We reviewed and summarized existing scientific literature related to MCES with the aim of extracting and classifying indicators used to assess and map them. We found 145 papers that specifically assessed marine and coastal ecosystem services from which we extracted 476 indicators. Food provision, in particular fisheries, was the most extensively analyzed MCES while water purification and coastal protection were the most frequently studied regulating and maintenance services. Also recreation and tourism under the cultural services was relatively well assessed. We highlight knowledge gaps regarding the availability of indicators that measure the capacity, flow or benefit derived from each ecosystem service. The majority of the case studies was found in mangroves and coastal wetlands and was mainly concentrated in Europe and North America. Our systematic review highlighted the need of an improved ecosystem service classification for marine and coastal systems, which is herein proposed with definitions and links to previous classifications. Conclusions/Significance This review summarizes the state of available information related to ecosystem services associated with marine and coastal ecosystems. The cataloging of MCES indicators and the integrated classification of MCES provided in this paper establish a background that can facilitate the planning and integration of future assessments. The final goal is to establish a consistent structure and populate it with information able to support the implementation of biodiversity conservation policies. PMID:23844080

  15. Changes in bacterial community dynamics associated with submarine groundwater discharge in a coastal area

    NASA Astrophysics Data System (ADS)

    Lee, Eunhee; Shin, Doyun; Moon, Hee Sun; Hyun, Sung Pil; Koh, Dong-Chan; Ha, Kyoochul

    2014-05-01

    the fresh groundwater discharge. Heat map and hierarchical cluster analysis revealed that the mixed water samples were separated from seawater samples, which resulted from significant increase in Shewanella sp. (ebb tide sample) and marine bacteria such as SAR11 and SAR116 clade belonging to α-Proteobacteria (flood tide sample). Principal component analysis (PCA) showed that the first two principal components explained about 84% of the variance in the sequence data. The microbial community in the seawater samples formed a distinct cluster. The microbial diversity in the mixed water samples changed depending on the seawater stage, showing similar trends in the phylogenetic classification. Our study results demonstrate that the microbial environment in the coastal zone subject to SGD and sea level fluctuation may change dynamically over short time period (< 1day). * This study was supported by the Basic Research Projects (14-3211-2) of the Korea Institute of Geoscience and Mineral Resources (KIGAM).

  16. Strong Seasonality and Interannual Recurrence in Marine Myovirus Communities

    PubMed Central

    Chow, C.-E. T.; Johannessen, T.; Fuhrman, J. A.; Thingstad, T. F.; Sandaa, R. A.

    2013-01-01

    The temporal community dynamics and persistence of different viral types in the marine environment are still mostly obscure. Polymorphism of the major capsid protein gene, g23, was used to investigate the community composition dynamics of T4-like myoviruses in a North Atlantic fjord for a period of 2 years. A total of 160 unique operational taxonomic units (OTUs) were identified by terminal restriction fragment length polymorphism (TRFLP) of the gene g23. Three major community profiles were identified (winter-spring, summer, and autumn), which resulted in a clear seasonal succession pattern. These seasonal transitions were recurrent over the 2 years and significantly correlated with progression of seawater temperature, Synechococcus abundance, and turbidity. The appearance of the autumn viral communities was concomitant with the occurrence of prominent Synechococcus blooms. As a whole, we found a highly dynamic T4-like viral community with strong seasonality and recurrence patterns. These communities were unexpectedly dominated by a group of persistently abundant viruses. PMID:23913432

  17. Silver uptake by a marine diatom and its transfer to the coastal copepod Acartia spinicauda.

    PubMed

    Xu, Yan; Wang, Wen-Xiong

    2004-03-01

    Silver (Ag) is an important metal contaminant in many coastal waters and often is accompanied by high nutrient concentrations in the effluent outfall. The biological uptake of Ag by the marine diatom Thalassiosira pseudonana at various levels of nitrate, ammonium, and phosphate was examined under different growth conditions of the cells. The biological uptake of Ag increased significantly with increasing concentrations of nitrate, ammonium, and phosphate, presumably because of the increase in algal growth rate or increasing sulfur-containing ligands available for Ag transport. The calculated Ag uptake rate constants increased by 3 to 16 times with increasing nitrate and ammonium concentration from 5.88 microM to 176 microM. The assimilation efficiency (AE) of Ag by the coastal copepod Acartia spinicauda was quantified under different ecological and chemical conditions of the diatom prey. The Ag AEs were in the range of 3 to 23%, and increased with decreasing diatom food concentrations or when the diatoms were grown at a lower nutrient level. Significant correlations were demonstrated between the AE and the distribution of Ag in the diatom's cytoplasm, the Ag concentration factor in the diatoms, Ag retention in the particles during the feeding period, and the Ag gut passage time in the copepods. Desorption within the copepod's gut appears to play a critical role in Ag assimilation and partially accounts for the variability of Ag AEs under different food and geochemical conditions. Our study highlights that several geochemical and physiological processes all significantly affect Ag trophic transfer in marine copepods. Given the dependence of Ag transfer on its concentration in ingested particles and food concentration, dietary uptake of Ag is probably variable in natural environments. The influence of eutrophication on Ag trophic transfer is dependent on the degree to which each kinetic parameter is affected by nutrient enrichments. PMID:15285362

  18. Ectoenzyme activity in coastal marine waters: response to temperature and metal ion availability

    NASA Astrophysics Data System (ADS)

    Wiedenbeck, J. K.; Neino, V.; Allison, S. D.; Martiny, A.

    2009-12-01

    Ectoenzymes in the ocean are vital for the breakdown of complex organic substrates and for the uptake of nutrients by marine organisms. The activity levels of these enzymes affect the turnover rate of nutrient pools within the ocean, and thus have a significant impact on global biogeochemical nutrient cycles. This study measured the activity of extracellular enzymes from seawater samples under different environmental conditions. Samples were collected daily from coastal waters in the subtropical North Pacific (Lat.: 33°). Ambient seawater temperatures were between 18° and 20° C for the duration of the study. The activity response of four enzymes (alkaline phosphatase, β-glucosidase, β-N-acetyl glucosaminidase, and leucine aminopeptidase) was measured over a range of temperatures (4° to 40° C). The optimal temperatures of all four enzymes were above the ambient seawater temperature of the samples: optimal temperatures of β-glucosidase, β-N-acetyl glucosaminidase, and leucine aminopeptidase in the seawater samples were between 28° and 34° C, while alkaline phosphatase activity increased with the temperature over the range tested. Enzymatic activity of alkaline phosphatase was further investigated under several metal ion conditions. Activity was highest in the presence of Co2+ ions, while the availability of other ions (Ca2+ and Mg2+/Zn2+) had a lesser effect. The influence of Co2+ on alkaline phosphatase activity indicates the presence of a Co2+-dependent alkaline phosphatase in coastal marine waters. These results suggest that variations in environmental conditions (such as temperature and ion concentration) have discernable effects on enzyme activity, and thus affect turnover rates of nutrient pools in the ocean.

  19. Palaeoecology and evolution of marine hard substrate communities

    NASA Astrophysics Data System (ADS)

    Taylor, P. D.; Wilson, M. A.

    2003-07-01

    Marine organisms have occupied hard substrates since the Archaean. Shells, rocks, wood and sedimentary hardgrounds offer relatively stable habitats compared to unconsolidated sediments, but the plants and animals which inhabit them must develop means to gain and defend this premium attachment space. Hard substrate communities are formed by organisms with a variety of strategies for adhering to and/or excavating the substrates they inhabit. While mobile grazers, organically attached and even soft-bodied organisms may leave evidence of their former presence in ancient hard substrate communities, a superior fossil record is left by sessile encrusters with mineralised skeletons and by borers which leave trace fossils. Furthermore, encrusters and borers are preserved in situ, retaining their spatial relationships to one another and to the substrate. Spatial competition, ecological succession, oriented growth, and differential utilisation of exposed vs. hidden substrate surfaces can all be observed or inferred. Hard substrate communities are thus excellent systems with which to study community evolution over hundreds of millions of years. Here we review the research on modern and ancient hard substrate communities, and point to some changes that have affected them over geological time scales. Such changes include a general increase in bioerosion of hard substrates, particularly carbonate surfaces, through the Phanerozoic. This is, at least in part, analogous to the infaunalisation trends seen in soft substrate communities. Encrusting forms show an increase in skeletalisation from the Palaeozoic into the Mesozoic and Cenozoic, which may be a response to increasing levels of predation. Hard substrate communities, considering borers and encrusters together, show a rough increase in tiering through the Phanerozoic which again parallels trends seen in soft substrate communities. This extensive review of the literature on living and fossil hard substrate organisms shows that

  20. Diversity of Bacteria in the Marine Sponge Aplysina fulva in Brazilian Coastal Waters▿ †

    PubMed Central

    Hardoim, C. C. P.; Costa, R.; Araújo, F. V.; Hajdu, E.; Peixoto, R.; Lins, U.; Rosado, A. S.; van Elsas, J. D.

    2009-01-01

    Microorganisms can account for up to 60% of the fresh weight of marine sponges. Marine sponges have been hypothesized to serve as accumulation spots of particular microbial communities, but it is unknown to what extent these communities are directed by the organism or the site or occur randomly. To address this question, we assessed the composition of specific bacterial communities associated with Aplysina fulva, one of the prevalent sponge species inhabiting Brazilian waters. Specimens of A. fulva and surrounding seawater were collected in triplicate in shallow water at two sites, Caboclo Island and Tartaruga beach, Búzios, Brazil. Total community DNA was extracted from the samples using “direct” and “indirect” approaches. 16S rRNA-based PCR-denaturing gradient gel electrophoresis (PCR-DGGE) analyses of the total bacterial community and of specific bacterial groups—Pseudomonas and Actinobacteria—revealed that the structure of these assemblages in A. fulva differed drastically from that observed in seawater. The DNA extraction methodology and sampling site were determinative for the composition of actinobacterial communities in A. fulva. However, no such effects could be gleaned from total bacterial and Pseudomonas PCR-DGGE profiles. Bacterial 16S rRNA gene clone libraries constructed from directly and indirectly extracted DNA did not differ significantly with respect to diversity and composition. Altogether, the libraries encompassed 15 bacterial phyla and the candidate division TM7. Clone sequences affiliated with the Cyanobacteria, Chloroflexi, Gamma- and Alphaproteobacteria, Actinobacteria, Bacteroidetes, and Acidobacteria were, in this order, most abundant. The bacterial communities associated with the A. fulva specimens were distinct and differed from those described in studies of sponge-associated microbiota performed with other sponge species. PMID:19304829

  1. Diversity of bacteria in the marine sponge Aplysina fulva in Brazilian coastal waters.

    PubMed

    Hardoim, C C P; Costa, R; Araújo, F V; Hajdu, E; Peixoto, R; Lins, U; Rosado, A S; van Elsas, J D

    2009-05-01

    Microorganisms can account for up to 60% of the fresh weight of marine sponges. Marine sponges have been hypothesized to serve as accumulation spots of particular microbial communities, but it is unknown to what extent these communities are directed by the organism or the site or occur randomly. To address this question, we assessed the composition of specific bacterial communities associated with Aplysina fulva, one of the prevalent sponge species inhabiting Brazilian waters. Specimens of A. fulva and surrounding seawater were collected in triplicate in shallow water at two sites, Caboclo Island and Tartaruga beach, Búzios, Brazil. Total community DNA was extracted from the samples using "direct" and "indirect" approaches. 16S rRNA-based PCR-denaturing gradient gel electrophoresis (PCR-DGGE) analyses of the total bacterial community and of specific bacterial groups--Pseudomonas and Actinobacteria--revealed that the structure of these assemblages in A. fulva differed drastically from that observed in seawater. The DNA extraction methodology and sampling site were determinative for the composition of actinobacterial communities in A. fulva. However, no such effects could be gleaned from total bacterial and Pseudomonas PCR-DGGE profiles. Bacterial 16S rRNA gene clone libraries constructed from directly and indirectly extracted DNA did not differ significantly with respect to diversity and composition. Altogether, the libraries encompassed 15 bacterial phyla and the candidate division TM7. Clone sequences affiliated with the Cyanobacteria, Chloroflexi, Gamma- and Alphaproteobacteria, Actinobacteria, Bacteroidetes, and Acidobacteria were, in this order, most abundant. The bacterial communities associated with the A. fulva specimens were distinct and differed from those described in studies of sponge-associated microbiota performed with other sponge species.

  2. Coastal Freshwater Wetland Plant Community Response to Seasonal Drought and Flooding in Northwestern Costa Rica

    EPA Science Inventory

    In tropical wet-dry climates, seasonal hydrologic cycles drive wetland plant community change and produce distinct seasonal plant assemblages. In this study, we examined the plant community response to seasonal flooding and drought in a large coastal freshwater wetland in northwe...

  3. Impact of lengthening open water season on food security in Alaska coastal communities: Global impacts may outweigh local "frontline" effects

    NASA Astrophysics Data System (ADS)

    Rolph, R.; Mahoney, A. R.

    2015-12-01

    Using ice concentration data from the Alaska Sea Ice Atlas from 1953-2013 for selected communities in Alaska, we find a consistent trend toward later freeze up and earlier breakup, leading a lengthened open water period. Such changes are often considered to bring a variety of "frontline" local impacts to Arctic coastal communities such as increased rates of coastal erosion. However, direct consequences of these changes to local food security (e.g. through impacts on subsistence activities and marine transport of goods) may be outweighed at least in the short term by the effects of large scale Arctic sea ice change coupled with global oil markets. For example, a later freeze-up might delay local hunters' transition from boats to snow-machines, but whether this trend will affect hunting success, especially in the next few years, is uncertain. Likewise, the magnitude of change in open water season length is unlikely to be sufficient to increase the frequency with which communities are served by barges. However, an expanding open water season throughout the Arctic has implications for the global economy, which can have indirect effects on local communities. In the Chukchi and Beaufort Seas, where rapid sea ice change has been accompanied by increased interest in oil and gas development, the U.S. Bureau of Ocean Energy Management currently requires drilling operations to cease 38 days prior to freeze up. Taking this into account, the lengthening open water season has effectively extended the drilling season for oil companies by 184% since the 1950s. If oil development goes ahead, local communities will likely experience a range of indirect impacts on food security due to increased vessel traffic and demand on infrastructure coupled with changes in local economies and employment opportunities. Increased likelihood of an oil spill in coastal waters also poses a significant threat to local food security. Thus, while Arctic coastal communities are already experiencing

  4. The effects of coastal development on sponge abundance, diversity, and community composition on Jamaican coral reefs.

    PubMed

    Stubler, Amber D; Duckworth, Alan R; Peterson, Bradley J

    2015-07-15

    Over the past decade, development along the northern coast of Jamaica has accelerated, resulting in elevated levels of sedimentation on adjacent reefs. To understand the effects of this development on sponge community dynamics, we conducted surveys at three locations with varying degrees of adjacent coastal development to quantify species richness, abundance and diversity at two depths (8-10 m and 15-18 m). Sediment accumulation rate, total suspended solids and other water quality parameters were also quantified. The sponge community at the location with the least coastal development and anthropogenic influence was often significantly different from the other two locations, and exhibited higher sponge abundance, richness, and diversity. Sponge community composition and size distribution were statistically different among locations. This study provides correlative evidence that coastal development affects aspects of sponge community ecology, although the precise mechanisms are still unclear.

  5. Effects of eutrophication on the planktonic food web dynamics of marine coastal ecosystems: The case study of two tropical inlets.

    PubMed

    Schmoker, Claire; Russo, Francesca; Drillet, Guillaume; Trottet, Aurore; Mahjoub, Mohamed-Sofiane; Hsiao, Shih-Hui; Larsen, Ole; Tun, Karenne; Calbet, Albert

    2016-08-01

    We studied the plankton dynamics of two semi-enclosed marine coastal inlets of the north of Jurong Island separated by a causeway (SW Singapore; May 2012-April 2013). The west side of the causeway (west station) has residence times of ca. one year and is markedly eutrophic. The east side (east station) has residence times of one month and presents lower nutrient concentrations throughout the year. The higher nutrient concentrations at the west station did not translate into significantly higher concentrations of chlorophyll a, with the exception of some peaks at the end of the South West Monsoon. Microzooplankton were more abundant at the west station. The west station exhibited more variable abundances of copepods during the year than did the east station, which showed a more stable pattern and higher diversity. Despite the higher nutrient concentrations at the west station (never limiting phytoplankton growth), the instantaneous phytoplankton growth rates there were generally lower than at the east station. The phytoplankton communities at the west station were top-down controlled, largely by microzooplankton grazing, whereas those of the east station alternated between top-down and bottom-up control, with mesozooplankton being the major grazers. Overall, the trophic transfer efficiency from nutrients to mesozooplankton in the eutrophic west station was less efficient than in the east station, but this was mostly because a poor use of inorganic nutrients by phytoplankton rather than an inefficient trophic transfer of carbon. Some hypotheses explaining this result are discussed.

  6. Anthropogenic and natural disturbances to marine benthic communities in Antarctica

    SciTech Connect

    Lenihan, H.; Oliver, J.S.

    1995-05-01

    Sampling and field experiments were conducted from 1975 to 1990 to test how the structure of marine benthic communities around McMurdo Station, Antarctica varied with levels of anthropogenic contaminants in marine sediments. The structure of communities (e.g., infauna density, species composition, and life history characteristics) in contaminated and uncontaminated areas were compared with the structure of communities influenced by two large-scale natural disturbances, anchor ice formation and uplift or iceberg scour. Benthic communities changed radically along a steep spatial gradient of anthropogenic hydrocarbon, metal, and PCB contamination around McMurdo Station. The heavily contaminated end of the gradient, Winter Quarters Bay, was low in infaunal and epifaunal abundance and was dominated by a few opportunistic species of polychaete worms. The edge of the heavily contaminated bay, the transition area, contained several motile polychaete species with less opportunistic life histories. Uncontaminated sedimentary habitats harbored dense tube mats of infaunal animals numerically dominated by populations of polychaete worms, crustaceans, and a large suspension feeding bivalve. These species are generally large and relatively sessile, except for several crustacean species living among the tubes. Although the community patterns around anthropogenic and natural disturbances were similar, particularly motile and opportunistic species at heavily disturbed and marginal areas, the natural disturbances cover much greater areas of the sea floor about the entire Antarctic continent. On the other hand, recovery from chemical contamination is likely to take many more decades than recovery from natural disturbances as contaminant degradation is a slow process. 77 refs., 6 figs., 5 tabs.

  7. Biogeochemical processes and buffering capacity concurrently affect acidification in a seasonally hypoxic coastal marine basin

    NASA Astrophysics Data System (ADS)

    Hagens, M.; Slomp, C. P.; Meysman, F. J. R.; Seitaj, D.; Harlay, J.; Borges, A. V.; Middelburg, J. J.

    2014-11-01

    Coastal areas are impacted by multiple natural and anthropogenic processes and experience stronger pH fluctuations than the open ocean. These variations can weaken or intensify the ocean acidification signal induced by increasing atmospheric pCO2. The development of eutrophication-induced hypoxia intensifies coastal acidification, since the CO2 produced during respiration decreases the buffering capacity of the hypoxic bottom water. To assess the combined ecosystem impacts of acidification and hypoxia, we quantified the seasonal variation in pH and oxygen dynamics in the water column of a seasonally stratified coastal basin (Lake Grevelingen, the Netherlands). Monthly water column chemistry measurements were complemented with estimates of primary production and respiration using O2 light-dark incubations, in addition to sediment-water fluxes of dissolved inorganic carbon (DIC) and total alkalinity (TA). The resulting dataset was used to set up a proton budget on a seasonal scale. Temperature-induced seasonal stratification combined with a high community respiration was responsible for the depletion of oxygen in the bottom water in summer. The surface water showed strong seasonal variation in process rates (primary production, CO2 air-sea exchange), but relatively small seasonal pH fluctuations (0.46 units on the total hydrogen ion scale). In contrast, the bottom water showed less seasonality in biogeochemical rates (respiration, sediment-water exchange), but stronger pH fluctuations (0.60 units). This marked difference in pH dynamics could be attributed to a substantial reduction in the acid-base buffering capacity of the hypoxic bottom water in the summer period. Our results highlight the importance of acid-base buffering in the pH dynamics of coastal systems and illustrate the increasing vulnerability of hypoxic, CO2-rich waters to any acidifying process.

  8. Biogeochemical processes and buffering capacity concurrently affect acidification in a seasonally hypoxic coastal marine basin

    NASA Astrophysics Data System (ADS)

    Hagens, M.; Slomp, C. P.; Meysman, F. J. R.; Seitaj, D.; Harlay, J.; Borges, A. V.; Middelburg, J. J.

    2015-03-01

    Coastal areas are impacted by multiple natural and anthropogenic processes and experience stronger pH fluctuations than the open ocean. These variations can weaken or intensify the ocean acidification signal induced by increasing atmospheric pCO2. The development of eutrophication-induced hypoxia intensifies coastal acidification, since the CO2 produced during respiration decreases the buffering capacity in any hypoxic bottom water. To assess the combined ecosystem impacts of acidification and hypoxia, we quantified the seasonal variation in pH and oxygen dynamics in the water column of a seasonally stratified coastal basin (Lake Grevelingen, the Netherlands). Monthly water-column chemistry measurements were complemented with estimates of primary production and respiration using O2 light-dark incubations, in addition to sediment-water fluxes of dissolved inorganic carbon (DIC) and total alkalinity (TA). The resulting data set was used to set up a proton budget on a seasonal scale. Temperature-induced seasonal stratification combined with a high community respiration was responsible for the depletion of oxygen in the bottom water in summer. The surface water showed strong seasonal variation in process rates (primary production, CO2 air-sea exchange), but relatively small seasonal pH fluctuations (0.46 units on the total hydrogen ion scale). In contrast, the bottom water showed less seasonality in biogeochemical rates (respiration, sediment-water exchange), but stronger pH fluctuations (0.60 units). This marked difference in pH dynamics could be attributed to a substantial reduction in the acid-base buffering capacity of the hypoxic bottom water in the summer period. Our results highlight the importance of acid-base buffering in the pH dynamics of coastal systems and illustrate the increasing vulnerability of hypoxic, CO2-rich waters to any acidifying process.

  9. The Behavior of Environmentally Friendly Corrosion Preventative Compounds in an Aggressive Coastal Marine Environment

    NASA Technical Reports Server (NTRS)

    Montgomery, Eliza L.; Calle, Luz Marina; Curran Jerome C.; Kolody, Mark R.

    2013-01-01

    The shift to use environmentally friendly technologies throughout future space-related launch programs prompted a study aimed at replacing current petroleum and solvent-based Corrosion Preventive Compounds (CPCs) with environmentally friendly alternatives. The work in this paper focused on the identification and evaluation of environmentally friendly CPCs for use in protecting flight hardware and ground support equipment from atmospheric corrosion. The CPCs, while a temporary protective coating, must survive in the aggressive coastal marine environment that exists throughout the Kennedy Space Center, Florida. The different protection behaviors of fifteen different soft film CPCs, both common petroleum-based and newer environmentally friendly types, were evaluated on various steel and aluminum substrates. The CPC and substrate systems were subjected to atmospheric testing at the Kennedy Space Center's Beachside Atmospheric Corrosion Test Site, as well as cyclic accelerated corrosion testing. Each CPC also underwent physical characterization and launch-related compatibility testing . The initial results for the fifteen CPC systems are reported : Key words: corrosion preventive compound, CPC, spaceport, environmentally friendly, atmospheric exposure, marine, carbon steel, aluminum alloy, galvanic corrosion, wire on bolt.

  10. The hidden seasonality of the rare biosphere in coastal marine bacterioplankton.

    PubMed

    Alonso-Sáez, Laura; Díaz-Pérez, Laura; Morán, Xosé Anxelu G

    2015-10-01

    Rare microbial taxa are increasingly recognized to play key ecological roles, but knowledge of their spatio-temporal dynamics is lacking. In a time-series study in coastal waters, we detected 83 bacterial lineages with significant seasonality, including environmentally relevant taxa where little ecological information was available. For example, Verrucomicrobia had recurrent maxima in summer, while the Flavobacteria NS4, NS5 and NS2b clades had contrasting seasonal niches. Among the seasonal taxa, only 4 were abundant and persistent, 20 cycled between rare and abundant and, remarkably, most of them (59) were always rare (contributing < 1% of total reads). We thus demonstrate that seasonal patterns in marine bacterioplankton are largely driven by lineages that never sustain abundant populations. A fewer number of rare taxa (20) also produced episodic 'blooms', and these events were highly synchronized, mostly occurring on a single month. The recurrent seasonal growth and loss of rare bacteria opens new perspectives on the temporal dynamics of the rare biosphere, hitherto mainly characterized by dormancy and episodes of 'boom and bust', as envisioned by the seed-bank hypothesis. The predictable patterns of seasonal reoccurrence are relevant for understanding the ecology of rare bacteria, which may include key players for the functioning of marine ecosystems.

  11. How marine debris ingestion differs among megafauna species in a tropical coastal area.

    PubMed

    Di Beneditto, Ana Paula Madeira; Awabdi, Danielle Rodrigues

    2014-11-15

    The marine debris ingested by megafauna species (Trichiurus lepturus, Chelonia mydas, Pontoporia blainvillei, and Sotalia guianensis) was recorded in a coastal area of southeastern Brazil (21-23°S). Marine debris was recorded in all species, mainly consisting of plastic material (flexible and hard plastics - clear, white, and colored- and nylon filaments). The 'pelagic predators' T. lepturus and S. guianesis showed the lowest percent frequencies of debris ingestion (0.7% and 1.3%, respectively), followed by the 'benthic predator' P. blainvillei (15.7%) and the 'benthic herbivorous C. mydas (59.2%). The debris found in C. mydas stomachs was opportunistically ingested during feeding activities on local macroalgal banks. In the study area, the benthic environment accumulates more anthropogenic debris than the pelagic environment, and benthic/demersal feeders are more susceptible to encounters and ingestion. The sub-lethal effects observed in C. mydas, such as intestinal obstruction due to hardened fecal material, should be considered a local conservation concern.

  12. Marine Phytophthora species can hamper conservation and restoration of vegetated coastal ecosystems.

    PubMed

    Govers, Laura L; Man In 't Veld, Willem A; Meffert, Johan P; Bouma, Tjeerd J; van Rijswick, Patricia C J; Heusinkveld, Jannes H T; Orth, Robert J; van Katwijk, Marieke M; van der Heide, Tjisse

    2016-08-31

    Phytophthora species are potent pathogens that can devastate terrestrial plants, causing billions of dollars of damage yearly to agricultural crops and harming fragile ecosystems worldwide. Yet, virtually nothing is known about the distribution and pathogenicity of their marine relatives. This is surprising, as marine plants form vital habitats in coastal zones worldwide (i.e. mangrove forests, salt marshes, seagrass beds), and disease may be an important bottleneck for the conservation and restoration of these rapidly declining ecosystems. We are the first to report on widespread infection of Phytophthora and Halophytophthora species on a common seagrass species, Zostera marina (eelgrass), across the northern Atlantic and Mediterranean. In addition, we tested the effects of Halophytophthora sp. Zostera and Phytophthora gemini on Z. marina seed germination in a full-factorial laboratory experiment under various environmental conditions. Results suggest that Phytophthora species are widespread as we found these oomycetes in eelgrass beds in six countries across the North Atlantic and Mediterranean. Infection by Halophytophthora sp. Zostera, P. gemini, or both, strongly affected sexual reproduction by reducing seed germination sixfold. Our findings have important implications for seagrass ecology, because these putative pathogens probably negatively affect ecosystem functioning, as well as current restoration and conservation efforts. PMID:27559058

  13. Marine Phytophthora species can hamper conservation and restoration of vegetated coastal ecosystems.

    PubMed

    Govers, Laura L; Man In 't Veld, Willem A; Meffert, Johan P; Bouma, Tjeerd J; van Rijswick, Patricia C J; Heusinkveld, Jannes H T; Orth, Robert J; van Katwijk, Marieke M; van der Heide, Tjisse

    2016-08-31

    Phytophthora species are potent pathogens that can devastate terrestrial plants, causing billions of dollars of damage yearly to agricultural crops and harming fragile ecosystems worldwide. Yet, virtually nothing is known about the distribution and pathogenicity of their marine relatives. This is surprising, as marine plants form vital habitats in coastal zones worldwide (i.e. mangrove forests, salt marshes, seagrass beds), and disease may be an important bottleneck for the conservation and restoration of these rapidly declining ecosystems. We are the first to report on widespread infection of Phytophthora and Halophytophthora species on a common seagrass species, Zostera marina (eelgrass), across the northern Atlantic and Mediterranean. In addition, we tested the effects of Halophytophthora sp. Zostera and Phytophthora gemini on Z. marina seed germination in a full-factorial laboratory experiment under various environmental conditions. Results suggest that Phytophthora species are widespread as we found these oomycetes in eelgrass beds in six countries across the North Atlantic and Mediterranean. Infection by Halophytophthora sp. Zostera, P. gemini, or both, strongly affected sexual reproduction by reducing seed germination sixfold. Our findings have important implications for seagrass ecology, because these putative pathogens probably negatively affect ecosystem functioning, as well as current restoration and conservation efforts.

  14. How marine debris ingestion differs among megafauna species in a tropical coastal area.

    PubMed

    Di Beneditto, Ana Paula Madeira; Awabdi, Danielle Rodrigues

    2014-11-15

    The marine debris ingested by megafauna species (Trichiurus lepturus, Chelonia mydas, Pontoporia blainvillei, and Sotalia guianensis) was recorded in a coastal area of southeastern Brazil (21-23°S). Marine debris was recorded in all species, mainly consisting of plastic material (flexible and hard plastics - clear, white, and colored- and nylon filaments). The 'pelagic predators' T. lepturus and S. guianesis showed the lowest percent frequencies of debris ingestion (0.7% and 1.3%, respectively), followed by the 'benthic predator' P. blainvillei (15.7%) and the 'benthic herbivorous C. mydas (59.2%). The debris found in C. mydas stomachs was opportunistically ingested during feeding activities on local macroalgal banks. In the study area, the benthic environment accumulates more anthropogenic debris than the pelagic environment, and benthic/demersal feeders are more susceptible to encounters and ingestion. The sub-lethal effects observed in C. mydas, such as intestinal obstruction due to hardened fecal material, should be considered a local conservation concern. PMID:25256299

  15. Phenotypic plasticity in heterotrophic marine microbial communities in continuous cultures.

    PubMed

    Beier, Sara; Rivers, Adam R; Moran, Mary Ann; Obernosterer, Ingrid

    2015-05-01

    Phenotypic plasticity (PP) is the development of alternate phenotypes of a given taxon as an adaptation to environmental conditions. Methodological limitations have restricted the quantification of PP to the measurement of a few traits in single organisms. We used metatranscriptomic libraries to overcome these challenges and estimate PP using the expressed genes of multiple heterotrophic organisms as a proxy for traits in a microbial community. The metatranscriptomes captured the expression response of natural marine bacterial communities grown on differing carbon resource regimes in continuous cultures. We found that taxa with different magnitudes of PP coexisted in the same cultures, and that members of the order Rhodobacterales had the highest levels of PP. In agreement with previous studies, our results suggest that continuous culturing may have specifically selected for taxa featuring a rather high range of PP. On average, PP and abundance changes within a taxon contributed equally to the organism's change in functional gene abundance, implying that both PP and abundance mediated observed differences in community function. However, not all functional changes due to PP were directly reflected in the bulk community functional response: gene expression changes in individual taxa due to PP were partly masked by counterbalanced expression of the same gene in other taxa. This observation demonstrates that PP had a stabilizing effect on a community's functional response to environmental change.

  16. Marine organic geochemistry in industrially affected coastal areas in Greece: Hydrocarbons in surface sediments

    NASA Astrophysics Data System (ADS)

    Hatzianestis, Ioannis

    2015-04-01

    Hydrocarbons are abundant components of the organic material in coastal zones. Their sources are mainly anthropogenic, but several natural ones have also been recognized. Among hydrocarbons, the polycyclic aromatic ones (PAHs) have received special attention since they considered as hazardous environmental chemicals and are included in priority pollutant lists. The purpose of this study was to investigate the distribution, sources and transport pathways of hydrocarbons in marine areas in Greece directly influenced from the operation of major industrial units in the coastal zone by using a molecular marker approach, characteristic compositional patterns and related indices and also to evaluate their potential toxicity. Thirty two surface sediment samples were collected from three marine areas: a) Antikyra bay in Korinthiakos gulf, affected from the operation of an alumina and production plant b) Larymna bay in Noth Evoikos, affected from the operation of a nickel production plant and c) Aliveri bay in South Evoikos Gulf, affected from a cement production plant. In all the studied areas aquaculture and fishing activities have been also developed in the coastal zone. High aliphatic hydrocarbon (AHC) concentrations (~500 μg/g), indicating significant petroleum related inputs, were measured only in Antikyra bay. In all the other samples, AHC values were below 100 μg/g. N-alkanes were the most prominent resolved components (R) with an elevated odd to even carbon number preference, revealing the high importance of terrestrial inputs in the study areas. The unresolved complex mixture (UCM) was the major component of the aliphatic fraction (UCM/R > 4), indicating a chronic oil pollution. A series of hopanes were also identified, with patterns characteristic of oil-derived hydrocarbons, further confirming the presence of pollutant inputs from fossil fuel products. Extremely high PAH concentrations (> 100,000 ng/g) were found in the close vicinity of the alumina production

  17. Trophic transfer of methyl siloxanes in the marine food web from coastal area of Northern China.

    PubMed

    Jia, Hongliang; Zhang, Zifeng; Wang, Chaoqun; Hong, Wen-Jun; Sun, Yeqing; Li, Yi-Fan

    2015-03-01

    Methyl siloxanes, which belong to organic silicon compounds and have linear and cyclic structures, are of particular concern because of their potential characteristic of persistent, bioaccumulated, toxic, and ecological harm. This study investigated the trophic transfer of four cyclic methyl siloxanes (octamethylcyclotetrasiloxane (D4), decamethylcyclopentasiloxane (D5), dodecamethylcyclohexasiloxane (D6), and tetradecamethylcycloheptasiloxane (D7)) in a marine food web from coastal area of Northern China. Trophic magnification of D4, D5, D6, and D7 were assessed as the slope of lipid equivalent concentrations regressed against trophic levels of marine food web configurations. A significant positive correlation (R = 0.44, p < 0.0001) was found between lipid normalized D5 concentrations and trophic levels in organisms, showing the trophic magnification potential of this chemical in the marine food web. The trophic magnification factor (TMF) of D5 was estimated to be 1.77 (95% confidence interval (CI): 1.41-2.24, 99.8% probability of the observing TMF > 1). Such a significant link, however, was not found for D4 (R = 0.14 and p = 0.16), D6 (R = 0.01 and p = 0.92), and D7 (R = -0.15 and p = 0.12); and the estimated values of TMFs (95% CI, probability of the observing TMF > 1) were 1.16 (0.94-1.44, 94.7%), 1.01 (0.84-1.22, 66.9%) and 0.85 (0.69-1.04, 48.6%) for D4, D6, and D7, respectively. The TMF value for the legacy contaminant BDE-99 was also estimated as a benchmark, and a significant positive correlation (R = 0.65, p < 0.0001) was found between lipid normalized concentrations and trophic levels in organisms. The TMF value of BDE-99 was 3.27 (95% CI: 2.49-4.30, 99.7% probability of the observing TMF > 1), showing the strong magnification in marine food webs. To the best of our knowledge, this is the first report on the trophic magnification of methyl siloxanes in China, which provided important information for trophic transformation of these compounds in marine

  18. Novel aromatic ring-hydroxylating dioxygenase genes from coastal marine sediments of Patagonia

    PubMed Central

    Lozada, Mariana; Riva Mercadal, Juan P; Guerrero, Leandro D; Di Marzio, Walter D; Ferrero, Marcela A; Dionisi, Hebe M

    2008-01-01

    Background Polycyclic aromatic hydrocarbons (PAHs), widespread pollutants in the marine environment, can produce adverse effects in marine organisms and can be transferred to humans through seafood. Our knowledge of PAH-degrading bacterial populations in the marine environment is still very limited, and mainly originates from studies of cultured bacteria. In this work, genes coding catabolic enzymes from PAH-biodegradation pathways were characterized in coastal sediments of Patagonia with different levels of PAH contamination. Results Genes encoding for the catalytic alpha subunit of aromatic ring-hydroxylating dioxygenases (ARHDs) were amplified from intertidal sediment samples using two different primer sets. Products were cloned and screened by restriction fragment length polymorphism analysis. Clones representing each restriction pattern were selected in each library for sequencing. A total of 500 clones were screened in 9 gene libraries, and 193 clones were sequenced. Libraries contained one to five different ARHD gene types, and this number was correlated with the number of PAHs found in the samples above the quantification limit (r = 0.834, p < 0.05). Overall, eight different ARHD gene types were detected in the sediments. In five of them, their deduced amino acid sequences formed deeply rooted branches with previously described ARHD peptide sequences, exhibiting less than 70% identity to them. They contain consensus sequences of the Rieske type [2Fe-2S] cluster binding site, suggesting that these gene fragments encode for ARHDs. On the other hand, three gene types were closely related to previously described ARHDs: archetypical nahAc-like genes, phnAc-like genes as identified in Alcaligenes faecalis AFK2, and phnA1-like genes from marine PAH-degraders from the genus Cycloclasticus. Conclusion These results show the presence of hitherto unidentified ARHD genes in this sub-Antarctic marine environment exposed to anthropogenic contamination. This information

  19. Investigation of processes controlling summertime gaseous elemental mercury oxidation at midlatitudinal marine, coastal, and inland sites

    NASA Astrophysics Data System (ADS)

    Ye, Zhuyun; Mao, Huiting; Lin, Che-Jen; Kim, Su Youn

    2016-07-01

    A box model incorporating a state-of-the-art chemical mechanism for atmospheric mercury (Hg) cycling was developed to investigate the oxidation of gaseous elemental mercury (GEM) at three locations in the northeastern United States: Appledore Island (AI; marine), Thompson Farm (TF; coastal, rural), and Pack Monadnock (PM; inland, rural, elevated). The chemical mechanism in this box model included the most up-to-date Hg and halogen chemistry. As a result, the box model was able to simulate reasonably the observed diurnal cycles of gaseous oxidized mercury (GOM) and chemical speciation bearing distinct differences between the three sites. In agreement with observations, simulated GOM diurnal cycles at AI and TF showed significant daytime peaks in the afternoon and nighttime minimums compared to flat GOM diurnal cycles at PM. Moreover, significant differences in the magnitude of GOM diurnal amplitude (AI > TF > PM) were captured in modeled results. At the coastal and inland sites, GEM oxidation was predominated by O3 and OH, contributing 80-99 % of total GOM production during daytime. H2O2-initiated GEM oxidation was significant (˜ 33 % of the total GOM) at the inland site during nighttime. In the marine boundary layer (MBL) atmosphere, Br and BrO became dominant GEM oxidants, with mixing ratios reaching 0.1 and 1 pptv, respectively, and contributing ˜ 70 % of the total GOM production during midday, while O3 dominated GEM oxidation (50-90 % of GOM production) over the remaining day when Br and BrO mixing ratios were diminished. The majority of HgBr produced from GEM+Br was oxidized by NO2 and HO2 to form brominated GOM species. Relative humidity and products of the CH3O2+BrO reaction possibly significantly affected the mixing ratios of Br or BrO radicals and subsequently GOM formation. Gas-particle partitioning could potentially be important in the production of GOM as well as Br and BrO at the marine site.

  20. Holocene environmental conditions in South Georgia - a multi-proxy study on a coastal marine record

    NASA Astrophysics Data System (ADS)

    Berg, Sonja; Jivcov, Sandra; Groten, Sonja; Viehberg, Finn; Rethemeyer, Janet; Melles, Martin

    2014-05-01

    The Holocene environmental history of the sub-Antarctic island of South Georgia so far has been reconstructed from lake sediments, peat records and geomorphological observations. The data available indicate a postglacial ice retreat, which reached the coastal areas around the early Holocene. Climate reconstructions for the Holocene, on the other hand, provide a more complex picture, which may partly result from the influence of local effects. We present preliminary results of a multi-proxy study on a sediment core recovered in early 2013 from a coastal marine inlet (Little Jason Lagoon) in Cumberland West Bay. The results include elemental data (high resolution XRF-scans, total organic carbon (TOC), nitrogen, and sulphur, lipid biomarkers, and macrofossil data. The sediment core comprises a c. 11m long sequence, which contains a complete record of postglacial sedimentation in the inlet. Its base is formed by a diamicton, indicating a former glaciation of the site, which is overlain by well-stratified sediments passing over into more massive muds in the upper past. A radiocarbon age from the organic-rich sediments above the diamicton provides a first estimate of 9700 14C years BP for a minimum age of ice retreat. We use the elemental data to infer changes in clastic input (e.g., K/Ti ratios), productivity (TOC) and water salinity (Cl counts) in the course of the Holocene. While Little Jason Lagoon has a connection to the sea today (sill depth c. 1 m), a decrease in Cl counts downcore points to fresher conditions in the early part of the record. This could be an indicator for changing relative sea level and/or changes in the amounts of freshwater inflow from the catchment. Macroscopic plant remains and lipid biomarkers (n-alkanes, n-fatty acids and sterols) provide information on the terrestrial vegetation in the catchment and its changes through time as well as on the influence of marine conditions in the lagoon. We suggest that the record from Little Jason Lagoon

  1. The vertical turbulence structure of the coastal marine atmospheric boundary layer

    SciTech Connect

    Tjernstroem, M.; Smedman, A.S. )

    1993-03-15

    The vertical turbulence structure in the marine atmosphere along a shoreline has been investigated using data from tower and aircraft measurements performed along the Baltic coast in the southeast of Sweden. Two properties make the Baltic Sea particularly interesting. It is surrounded by land in all directions within moderate advection distances, and it features a significant annual lag in sea surface temperature as compared with inland surface temperature. The present data were collected mostly during spring or early summer, when the water is cool, i.e., with a stably or neutrally stratified marine boundary layer usually capped by an inversion. Substantial daytime heating over the land area results in a considerable horizontal thermal contrast. Measurements were made on a small island, on a tower with a good sea fetch, and with an airborne instrument package. The profile data from the aircraft is from 25 slant soundings performed in connection to low level boundary layer flights. The results from the profiles are extracted through filtering techniques on individual time (space) series (individual profiles), applying different normalization and finally averaging over all or over groups of profiles. The land-based data are from a low tower situated on the shoreline of a small island with a wide sector of unobstructed sea fetch. Several factors are found that add to the apparent complexity of the coastal marine environment: the state of the sea appears to have a major impact on the turbulence structure of the surface layer, jet-shaped wind speed profiles were very common at the top of the boundary layer (in about 50% of the cases) and distinct layers with increased turbulence were frequently found well above the boundary layer (in about 80% of the cases). The present paper will concentrate on a description of the experiment, the analysis methods, and a general description of the boundary layer turbulence structure over the Baltic Sea. 40 refs., 16 figs., 2 tabs.

  2. Effects of near-future ocean acidification, fishing, and marine protection on a temperate coastal ecosystem.

    PubMed

    Cornwall, Christopher E; Eddy, Tyler D

    2015-02-01

    Understanding ecosystem responses to global and local anthropogenic impacts is paramount to predicting future ecosystem states. We used an ecosystem modeling approach to investigate the independent and cumulative effects of fishing, marine protection, and ocean acidification on a coastal ecosystem. To quantify the effects of ocean acidification at the ecosystem level, we used information from the peer-reviewed literature on the effects of ocean acidification. Using an Ecopath with Ecosim ecosystem model for the Wellington south coast, including the Taputeranga Marine Reserve (MR), New Zealand, we predicted ecosystem responses under 4 scenarios: ocean acidification + fishing; ocean acidification + MR (no fishing); no ocean acidification + fishing; no ocean acidification + MR for the year 2050. Fishing had a larger effect on trophic group biomasses and trophic structure than ocean acidification, whereas the effects of ocean acidification were only large in the absence of fishing. Mortality by fishing had large, negative effects on trophic group biomasses. These effects were similar regardless of the presence of ocean acidification. Ocean acidification was predicted to indirectly benefit certain species in the MR scenario. This was because lobster (Jasus edwardsii) only recovered to 58% of the MR biomass in the ocean acidification + MR scenario, a situation that benefited the trophic groups lobsters prey on. Most trophic groups responded antagonistically to the interactive effects of ocean acidification and marine protection (46%; reduced response); however, many groups responded synergistically (33%; amplified response). Conservation and fisheries management strategies need to account for the reduced recovery potential of some exploited species under ocean acidification, nonadditive interactions of multiple factors, and indirect responses of species to ocean acidification caused by declines in calcareous predators.

  3. Screening for Viral Hemorrhagic Septicemia Virus in Marine Fish along the Norwegian Coastal Line

    PubMed Central

    Sandlund, Nina; Gjerset, Britt; Bergh, Øivind; Modahl, Ingebjørg; Olesen, Niels Jørgen; Johansen, Renate

    2014-01-01

    Viral hemorrhagic septicemia virus (VHSV) infects a wide range of marine fish species. To study the occurrence of VHSV in wild marine fish populations in Norwegian coastal waters and fjord systems a total of 1927 fish from 39 different species were sampled through 5 research cruises conducted in 2009 to 2011. In total, VHSV was detected by rRT-PCR in twelve samples originating from Atlantic herring (Clupea harengus), haddock (Melanogrammus aeglefinus), whiting (Merlangius merlangus) and silvery pout (Gadiculus argenteus). All fish tested positive in gills while four herring and one silvery pout also tested positive in internal organs. Successful virus isolation in cell culture was only obtained from one pooled Atlantic herring sample which shows that today's PCR methodology have a much higher sensitivity than cell culture for detection of VHSV. Sequencing revealed that the positive samples belonged to VHSV genotype Ib and phylogenetic analysis shows that the isolate from Atlantic herring and silvery pout are closely related. All positive fish were sampled in the same area in the northern county of Finnmark. This is the first detection of VHSV in Atlantic herring this far north, and to our knowledge the first detection of VHSV in silvery pout. However, low prevalence of VHSV genotype Ib in Atlantic herring and other wild marine fish are well known in other parts of Europe. Earlier there have been a few reports of disease outbreaks in farmed rainbow trout with VHSV of genotype Ib, and our results show that there is a possibility of transfer of VHSV from wild to farmed fish along the Norwegian coast line. The impact of VHSV on wild fish is not well documented. PMID:25248078

  4. Key geochemical factors regulating Mn(IV)-catalyzed anaerobic nitrification in coastal marine sediments

    NASA Astrophysics Data System (ADS)

    Lin, Hui; Taillefert, Martial

    2014-05-01

    The reduction of Mn(IV) oxides coupled to the anaerobic oxidation of NH4+ has been proposed for more than a decade to contribute to the fixed nitrogen pool in marine sediments, yet the existence of this process is still under debate. In this study, surface sediments from an intertidal salt marsh were incubated with MnO2 in the presence of elevated concentrations of NH4+ to test the hypothesis that the reduction of Mn(IV) oxides catalyzes anaerobic NH4+ oxidation to NO2- or NO3-. Geochemical factors such as the ratio of Mn(IV) to NH4+, the type of Mn(IV) oxides (amorphous or colloidal MnO2), and the redox potential of the sediment significantly affect the activity of anaerobic nitrification. Incubations show that the net production of NO3- is stimulated under anaerobic conditions with external addition of colloidal but not amorphous MnO2 and is facilitated by the presence of high concentrations of NH4+. Mass balance calculations demonstrate that anaerobic NH4+ oxidation contributes to the net consumption of NH4+, providing another piece of evidence for the occurrence of Mn(IV)-catalyzed anaerobic nitrification in coastal marine sediments. Finally, anaerobic nitrification is stimulated by the amendment of small concentrations of NO3- or the absence of sulfate reduction, suggesting that moderately reducing conditions favor anaerobic NH4+ oxidation. Overall, these findings suggest that Mn(IV)-catalyzed anaerobic nitrification in suboxic sediments with high N/Mn concentration ratios and highly reactive manganese oxides may be an important source of NO2- and NO3- for subsequent marine nitrogen loss via denitrification or anammox.

  5. Effects of near-future ocean acidification, fishing, and marine protection on a temperate coastal ecosystem.

    PubMed

    Cornwall, Christopher E; Eddy, Tyler D

    2015-02-01

    Understanding ecosystem responses to global and local anthropogenic impacts is paramount to predicting future ecosystem states. We used an ecosystem modeling approach to investigate the independent and cumulative effects of fishing, marine protection, and ocean acidification on a coastal ecosystem. To quantify the effects of ocean acidification at the ecosystem level, we used information from the peer-reviewed literature on the effects of ocean acidification. Using an Ecopath with Ecosim ecosystem model for the Wellington south coast, including the Taputeranga Marine Reserve (MR), New Zealand, we predicted ecosystem responses under 4 scenarios: ocean acidification + fishing; ocean acidification + MR (no fishing); no ocean acidification + fishing; no ocean acidification + MR for the year 2050. Fishing had a larger effect on trophic group biomasses and trophic structure than ocean acidification, whereas the effects of ocean acidification were only large in the absence of fishing. Mortality by fishing had large, negative effects on trophic group biomasses. These effects were similar regardless of the presence of ocean acidification. Ocean acidification was predicted to indirectly benefit certain species in the MR scenario. This was because lobster (Jasus edwardsii) only recovered to 58% of the MR biomass in the ocean acidification + MR scenario, a situation that benefited the trophic groups lobsters prey on. Most trophic groups responded antagonistically to the interactive effects of ocean acidification and marine protection (46%; reduced response); however, many groups responded synergistically (33%; amplified response). Conservation and fisheries management strategies need to account for the reduced recovery potential of some exploited species under ocean acidification, nonadditive interactions of multiple factors, and indirect responses of species to ocean acidification caused by declines in calcareous predators. PMID:25354555

  6. Spatial patterns in community structure of motile epibenthic fauna in coastal habitats along the Skagerrak - Baltic salinity gradient

    NASA Astrophysics Data System (ADS)

    Nohrén, Emma; Pihl, Leif; Wennhage, Håkan

    2009-08-01

    Patterns in community structure and functioning of motile epibenthic fauna were investigated in shallow (0-1 m) sediment habitats along the Skagerrak-Baltic estuarine gradient (salinity range from 4 to 34). The study area was divided into five regions, reflecting different sea-basins along the 1260 km coastline, and fauna was collected at six sites within each region. Ten replicate samples of motile epibenthic fauna were taken randomly at each site with a portable drop trap (bottom area 1 m 2) in June and September in 2004. All together, 110 taxa were found, of which 45 had a marine and 65 a limnic origin. The marine species decreased along the salinity gradient while the limnic showed the opposite pattern. Number of species and abundance of epibenthic fauna exhibited considerable local and regional variation, with a trend of increase with decreasing salinity. Fauna biomass, on the other hand was significantly higher (six times) in the Skagerrak-Kattegat area compared to the Baltic. There was a significant difference in fauna composition among regions and season, but with high similarity within the five regions, which implies that management of such coastal habitats should preferably be based on scales of a region (ca. 100 km) or smaller. Predators were the dominant functional group in all coastal regions, with a species shift from Crustacea to Insecta along the salinity gradient and with gobid fish occurring in all regions. Grazers were the second most important group in the Skagerrak-Kattegat area, but planktovores were more important in two of the Baltic regions. The importance of shallow sediment bottoms as feeding and nursery grounds for coastal fish assemblages is discussed and compared throughout the investigated area.

  7. Assessment of vulnerability to future marine processes of urbanized coastal environments by a GIS-based approach: expected scenario in the metropolitan area of Bari (Italy)

    NASA Astrophysics Data System (ADS)

    Mancini, F.; Ceppi, C.; Christopulos, V.

    2013-12-01

    Literature concerning the risk assessment procedures after extreme meteorological events is generally focused on the establishing of relationship between actual severe weather conditions and impact detected over the involved zones. Such an events are classified on the basis of measurements and observation able to assess the magnitude of phenomena or on the basis of related effects on the affected area, the latter being deeply connected with the overall physical vulnerability. However such assessment almost never do consider scenario about expected extreme event and possible pattern of urbanization at the time of impact and nor the spatial and temporal uncertainty of phenomena are taken into account. The drawn of future scenario about coastal vulnerability to marine processes is therefore difficult. This work focuses the study case of the Metropoli Terra di Bari (metropolitan area of Bari, Apulia, Italy) where a coastal vulnerability analysis due to climate changes expected on the basis of expert opinions coming from the scientific community was carried out. Several possible impacts on the coastal environments were considered, in particular sea level rise inundation, flooding due to storm surge and coastal erosion. For such a purpose the methodology base on SRES (Special Report on Emission Scenario) produced by the IPCC (Intergovernmental Panel on Climate Change) was adopted after a regionalization procedure as carried out by Verburgh and others (2006) at the European scale. The open source software SLEUTH, base on the cellular automate principle, was used and the reliability of obtained scenario verified through the Monte Carlo method. Once these scenario were produced, a GIS-based multicriteria methodology was implemented to evaluate the vulnerability of the urbanized coastal area of interest. Several vulnerability maps related are therefore available for different scenario able to consider the degree of hazards and potential development of the typology and extent

  8. Integrated network modelling for identifying microbial mechanisms of particulate organic carbon accumulation in coastal marine systems

    NASA Astrophysics Data System (ADS)

    McDonald, Karlie; Turk, Valentina; Mozetič, Patricija; Tinta, Tinkara; Malfatti, Francesca; Hannah, David; Krause, Stefan

    2016-04-01

    Accumulation of particulate organic carbon (POC) has the potential to change the structure and function of marine ecosystems. High abidance of POC can develop into aggregates, known as marine snow or mucus aggregates that can impair essential marine ecosystem functioning and services. Currently marine POC formation, accumulation and sedimentation processes are being explored as potential pathways to remove CO2 from the atmosphere by CO2 sequestration via fixation into biomass by phytoplankton. However, the current ability of scientists, environmental managers and regulators to analyse and predict high POC concentrations is restricted by the limited understanding of the dynamic nature of the microbial mechanisms regulating POC accumulation events in marine environments. We present a proof of concept study that applies a novel Bayesian Networks (BN) approach to integrate relevant biological and physical-chemical variables across spatial and temporal scales in order to identify the interactions of the main contributing microbial mechanisms regulating POC accumulation in the northern Adriatic Sea. Where previous models have characterised only the POC formed, the BN approach provides a probabilistic framework for predicting the occurrence of POC accumulation by linking biotic factors with prevailing environmental conditions. In this paper the BN was used to test three scenarios (diatom, nanoflagellate, and dinoflagellate blooms). The scenarios predicted diatom blooms to produce high chlorophyll a at the water surface while nanoflagellate blooms were predicted to occur at lower depths (> 6m) in the water column and produce lower chlorophyll a concentrations. A sensitivity analysis identified the variables with the greatest influence on POC accumulation being the enzymes protease and alkaline phosphatase, which highlights the importance of microbial community interactions. The developed proof of concept BN model allows for the first time to quantify the impacts of

  9. Parallel genetic divergence among coastal-marine ecotype pairs of European anchovy explained by differential introgression after secondary contact.

    PubMed

    Le Moan, A; Gagnaire, P-A; Bonhomme, F

    2016-07-01

    Ecophenotypic differentiation among replicate ecotype pairs within a species complex is often attributed to independent outcomes of parallel divergence driven by adaptation to similar environmental contrasts. However, the extent to which parallel phenotypic and genetic divergence patterns have emerged independently is increasingly questioned by population genomic studies. Here, we document the extent of genetic differentiation within and among two geographic replicates of the coastal and marine ecotypes of the European anchovy (Engraulis encrasicolus) gathered from Atlantic and Mediterranean locations. Using a genome-wide data set of RAD-derived SNPs, we show that habitat type (marine vs. coastal) is the most important component of genetic differentiation among populations of anchovy. By analysing the joint allele frequency spectrum of each coastal-marine ecotype pair, we show that genomic divergence patterns between ecotypes can be explained by a postglacial secondary contact following a long period of allopatric isolation (c. 300 kyrs). We found strong support for a model including heterogeneous migration among loci, suggesting that secondary gene flow has eroded past differentiation at different rates across the genome. Markers experiencing reduced introgression exhibited strongly correlated differentiation levels among Atlantic and Mediterranean regions. These results support that partial reproductive isolation and parallel genetic differentiation among replicate pairs of anchovy ecotypes are largely due to a common divergence history prior to secondary contact. They moreover provide comprehensive insights into the origin of a surprisingly strong fine-scale genetic structuring in a high gene flow marine fish, which should improve stock management and conservation actions.

  10. Coastal terrorism: using tabletop discussions to enhance coastal community infrastructure through relationship building.

    PubMed

    Richter, Jane; Livet, Melanie; Stewart, Jill; Feigley, Charles E; Scott, Geoff; Richter, Donna L

    2005-11-01

    The unique vulnerability of the nation's ports to terrorist attacks and other major disasters requires development of specialized training approaches that integrate and connect critical stakeholders. In 2003, the University of South Carolina Center for Public Health Preparedness developed and held its first Coastal Terrorism workshop in conjunction with the National Oceanic and Atmospheric Administration. Key federal, regional, state, and coastal agency leaders were invited to the 2-day event to explore, in a no-risk environment, the crucial role that public health agencies would play in a covert biological agent incident aboard a cruise ship. The incident began as a possible outbreak of a Norwalk-like viral agent; however, as the scenario unfolded, evidence of a terrorist plot emerged. This immediately shifted the scenario from a public health-dominated incident to one directed by law enforcement. Communication and coordination issues surfaced illustrating potential conflicts between disciplines and jurisdictions in terms of roles and responsibilities of responding agencies. The goals of the workshop were to facilitate communication and interagency networking among coastal stakeholders while assessing their training and research needs and increasing their familiarity with resources and protocols regarding a bioterrorist coastal event. Positive systems changes were observed.

  11. Predictive occurrence models for coastal wetland plant communities: delineating hydrologic response surfaces with multinomial logistic regression

    USGS Publications Warehouse

    Snedden, Gregg A.; Steyer, Gregory D.

    2013-01-01

    Understanding plant community zonation along estuarine stress gradients is critical for effective conservation and restoration of coastal wetland ecosystems. We related the presence of plant community types to estuarine hydrology at 173 sites across coastal Louisiana. Percent relative cover by species was assessed at each site near the end of the growing season in 2008, and hourly water level and salinity were recorded at each site Oct 2007–Sep 2008. Nine plant community types were delineated with k-means clustering, and indicator species were identified for each of the community types with indicator species analysis. An inverse relation between salinity and species diversity was observed. Canonical correspondence analysis (CCA) effectively segregated the sites across ordination space by community type, and indicated that salinity and tidal amplitude were both important drivers of vegetation composition. Multinomial logistic regression (MLR) and Akaike's Information Criterion (AIC) were used to predict the probability of occurrence of the nine vegetation communities as a function of salinity and tidal amplitude, and probability surfaces obtained from the MLR model corroborated the CCA results. The weighted kappa statistic, calculated from the confusion matrix of predicted versus actual community types, was 0.7 and indicated good agreement between observed community types and model predictions. Our results suggest that models based on a few key hydrologic variables can be valuable tools for predicting vegetation community development when restoring and managing coastal wetlands.

  12. Phylogenetically and Spatially Close Marine Sponges Harbour Divergent Bacterial Communities

    PubMed Central

    Hardoim, Cristiane C. P.; Esteves, Ana I. S.; Pires, Francisco R.; Gonçalves, Jorge M. S.; Cox, Cymon J.; Xavier, Joana R.; Costa, Rodrigo

    2012-01-01

    Recent studies have unravelled the diversity of sponge-associated bacteria that may play essential roles in sponge health and metabolism. Nevertheless, our understanding of this microbiota remains limited to a few host species found in restricted geographical localities, and the extent to which the sponge host determines the composition of its own microbiome remains a matter of debate. We address bacterial abundance and diversity of two temperate marine sponges belonging to the Irciniidae family - Sarcotragus spinosulus and Ircinia variabilis – in the Northeast Atlantic. Epifluorescence microscopy revealed that S. spinosulus hosted significantly more prokaryotic cells than I. variabilis and that prokaryotic abundance in both species was about 4 orders of magnitude higher than in seawater. Polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) profiles of S. spinosulus and I. variabilis differed markedly from each other – with higher number of ribotypes observed in S. spinosulus – and from those of seawater. Four PCR-DGGE bands, two specific to S. spinosulus, one specific to I. variabilis, and one present in both sponge species, affiliated with an uncultured sponge-specific phylogenetic cluster in the order Acidimicrobiales (Actinobacteria). Two PCR-DGGE bands present exclusively in S. spinosulus fingerprints affiliated with one sponge-specific phylogenetic cluster in the phylum Chloroflexi and with sponge-derived sequences in the order Chromatiales (Gammaproteobacteria), respectively. One Alphaproteobacteria band specific to S. spinosulus was placed in an uncultured sponge-specific phylogenetic cluster with a close relationship to the genus Rhodovulum. Our results confirm the hypothesized host-specific composition of bacterial communities between phylogenetically and spatially close sponge species in the Irciniidae family, with S. spinosulus displaying higher bacterial community diversity and distinctiveness than I. variabilis. These

  13. Ultradeep 16S rRNA Sequencing Analysis of Geographically Similar but Diverse Unexplored Marine Samples Reveal Varied Bacterial Community Composition

    PubMed Central

    Karutha Pandian, Shunmugiah

    2013-01-01

    Background Bacterial community composition in the marine environment differs from one geographical location to another. Reports that delineate the bacterial diversity of different marine samples from geographically similar location are limited. The present study aims to understand whether the bacterial community compositions from different marine samples harbour similar bacterial diversity since these are geographically related to each other. Methods and Principal Findings In the present study, 16S rRNA deep sequencing analysis targeting V3 region was performed using Illumina bar coded sequencing. A total of 22.44 million paired end reads were obtained from the metagenomic DNA of Marine sediment, Rhizosphere sediment, Seawater and the epibacterial DNA of Seaweed and Seagrass. Diversity index analysis revealed that Marine sediment has the highest bacterial diversity and the least bacterial diversity was observed in Rhizosphere sediment. Proteobacteria, Actinobacteria and Bacteroidetes were the dominant taxa present in all the marine samples. Nearly 62–71% of rare species were identified in all the samples and most of these rare species were unique to a particular sample. Further taxonomic assignment at the phylum and genus level revealed that the bacterial community compositions differ among the samples. Conclusion This is the first report that supports the fact that, bacterial community composition is specific for specific samples irrespective of its similar geographical location. Existence of specific bacterial community for each sample may drive overall difference in bacterial structural composition of each sample. Further studies like whole metagenomic sequencing will throw more insights to the key stone players and its interconnecting metabolic pathways. In addition, this is one of the very few reports that depicts the unexplored bacterial diversity of marine samples (Marine sediment, Rhizosphere sediment, Seawater) and the host associated marine samples

  14. Relative sea level and coastal environments in arctic Alaska during Marine Isotope Stage 5

    NASA Astrophysics Data System (ADS)

    Farquharson, L. M.; Mann, D. H.; Jones, B. M.; Rittenour, T. M.; Grosse, G.; Groves, P.

    2015-12-01

    Marine Isotope Stage (MIS) 5 was characterized by marked fluctuations in climate, the warmest being MIS 5e (124-119 ka) when relative sea level (RSL) stood 2-10 m higher than today along many coastlines. In northern Alaska, marine deposits now 5-10 m above modern sea level are assigned to this time period and termed the Pelukian transgression (PT). Complicating this interpretation is the possibility that an intra-Stage 5 ice shelf extended along the Alaskan coast, causing isostatic depression along its grounded margins, which caused RSL highs even during periods of low, global RSL. Here we use optically stimulated luminescence (OSL) to date inferred PT deposits on the Beaufort Sea coastal plain. A transition from what we interpret to be lagoonal mud to sandy tidal flat deposits lying ~ 2.75 m asl dates to 113+/-18 ka. Above this, a 5-m thick gravelly barrier beach dates to 95 +/- 20 ka. This beach contains well-preserved marine molluscs, whale vertebrae, and walrus tusks. Pleistocene-aged ice-rich eolian silt (yedoma) blanket the marine deposits and date to 57.6 +/-10.9 ka. Our interpretation of this chronostratigraphy is that RSL was several meters higher than today during MIS 5e, and lagoons or brackish lakes were prevalent. Gravel barrier beaches moved onshore as local RSL rose further after MIS 5e. The error range of the OSL age of the barrier-beach unit spans the remaining four substages of MIS 5; however, the highstand of RSL on this arctic coastline appears to occurr after the warmest part of the last interglacial and appears not to be coeval with the eustatic maximum reached at lower latitudes during MIS 5. One possibility is that RSL along the Beaufort Sea coast was affected by isostatic depression caused by an ice shelf associated with widespread, intra-Stage 5 glaciation that was out of phase with lower latitude glaciation and whose extent and timing remains enigmatic.

  15. A novel approach to model exposure of coastal-marine ecosystems to riverine flood plumes based on remote sensing techniques.

    PubMed

    Álvarez-Romero, Jorge G; Devlin, Michelle; Teixeira da Silva, Eduardo; Petus, Caroline; Ban, Natalie C; Pressey, Robert L; Kool, Johnathan; Roberts, Jason J; Cerdeira-Estrada, Sergio; Wenger, Amelia S; Brodie, Jon

    2013-04-15

    Increased loads of land-based pollutants are a major threat to coastal-marine ecosystems. Identifying the affected marine areas and the scale of influence on ecosystems is critical to assess the impacts of degraded water quality and to inform planning for catchment management and marine conservation. Studies using remotely-sensed data have contributed to our understanding of the occurrence and influence of river plumes, and to our ability to assess exposure of marine ecosystems to land-based pollutants. However, refinement of plume modeling techniques is required to improve risk assessments. We developed a novel, complementary, approach to model exposure of coastal-marine ecosystems to land-based pollutants. We used supervised classification of MODIS-Aqua true-color satellite imagery to map the extent of plumes and to qualitatively assess the dispersal of pollutants in plumes. We used the Great Barrier Reef (GBR), the world's largest coral reef system, to test our approach. We combined frequency of plume occurrence with spatially distributed loads (based on a cost-distance function) to create maps of exposure to suspended sediment and dissolved inorganic nitrogen. We then compared annual exposure maps (2007-2011) to assess inter-annual variability in the exposure of coral reefs and seagrass beds to these pollutants. We found this method useful to map plumes and qualitatively assess exposure to land-based pollutants. We observed inter-annual variation in exposure of ecosystems to pollutants in the GBR, stressing the need to incorporate a temporal component into plume exposure/risk models. Our study contributes to our understanding of plume spatial-temporal dynamics of the GBR and offers a method that can also be applied to monitor exposure of coastal-marine ecosystems to plumes and explore their ecological influences.

  16. Sea Level Rise Decision Support Tools for Adaptation Planning in Vulnerable Coastal Communities

    NASA Astrophysics Data System (ADS)

    Rozum, J. S.; Marcy, D.

    2015-12-01

    NOAA is involved in a myriad of climate related research and projects that help decision makers and the public understand climate science as well as climate change impacts. The NOAA Office for Coastal Management (OCM) provides data, tools, trainings and technical assistance to coastal resource managers. Beginning in 2011, NOAA OCM began developing a sea level rise and coastal flooding impacts viewer which provides nationally consistent data sets and analyses to help communities with coastal management goals such as: understanding and communicating coastal flood hazards, performing vulnerability assessments and increasing coastal resilience, and prioritizing actions for different inundation/flooding scenarios. The Viewer is available on NOAA's Digital Coast platform: (coast.noaa.gov/ditgitalcoast/tools/slr). In this presentation we will share the lessons learned from our work with coastal decision-makers on the role of coastal flood risk data and tools in helping to shape future land use decisions and policies. We will also focus on a recent effort in California to help users understand the similarities and differences of a growing array of sea level rise decision support tools. NOAA staff and other partners convened a workshop entitled, "Lifting the Fog: Bringing Clarity to Sea Level Rise and Shoreline Change Models and Tools," which was attended by tool develops, science translators and coastal managers with the goal to create a collaborative communication framework to help California coastal decision-makers navigate the range of available sea level rise planning tools, and to inform tool developers of future planning needs. A sea level rise tools comparison matrix will be demonstrated. This matrix was developed as part of this effort and has been expanded to many other states via a partnership with NOAA, Climate Central, and The Nature Conservancy.

  17. The abundance, composition and sources of marine debris in coastal seawaters or beaches around the northern South China Sea (China).

    PubMed

    Zhou, Peng; Huang, Chuguang; Fang, Hongda; Cai, Weixu; Li, Dongmei; Li, Xiaomin; Yu, Hansheng

    2011-09-01

    The abundance and composition of marine debris including floating marine debris (FMD), seafloor marine debris (SMD) and beached marine debris (BMD) were investigated in coastal seawaters/beaches around the northern South China Sea during 2009 and 2010. The FMD density was 4.947 (0.282-16.891) items/km², with plastics (44.9%) and Styrofoam (23.2%) dominating. More than 99.0% of FMD was small or medium size floating marine debris. The SMD and BMD densities of were 0.693 (0.147-5.000) and 32.82 (2.83-375.00) items/km², respectively. SMD was composed of plastics (47.0%), wood (15.2%), fabric/fiber (13.6%) and glass (12.1%), while BMD was composed of plastics (42.0%) and wood (33.7%). More than 90% of FMD, 75% of SMD and 95% of BMD were not ocean-based sources but land-based sources, mostly attributed to coastal/recreational activity, because of the effect of human activities in the areas.

  18. The abundance, composition and sources of marine debris in coastal seawaters or beaches around the northern South China Sea (China).

    PubMed

    Zhou, Peng; Huang, Chuguang; Fang, Hongda; Cai, Weixu; Li, Dongmei; Li, Xiaomin; Yu, Hansheng

    2011-09-01

    The abundance and composition of marine debris including floating marine debris (FMD), seafloor marine debris (SMD) and beached marine debris (BMD) were investigated in coastal seawaters/beaches around the northern South China Sea during 2009 and 2010. The FMD density was 4.947 (0.282-16.891) items/km², with plastics (44.9%) and Styrofoam (23.2%) dominating. More than 99.0% of FMD was small or medium size floating marine debris. The SMD and BMD densities of were 0.693 (0.147-5.000) and 32.82 (2.83-375.00) items/km², respectively. SMD was composed of plastics (47.0%), wood (15.2%), fabric/fiber (13.6%) and glass (12.1%), while BMD was composed of plastics (42.0%) and wood (33.7%). More than 90% of FMD, 75% of SMD and 95% of BMD were not ocean-based sources but land-based sources, mostly attributed to coastal/recreational activity, because of the effect of human activities in the areas. PMID:21764082

  19. Hurricane Influences on Vegetation Community Change in Coastal Louisiana

    USGS Publications Warehouse

    Steyer, Gregory D.; Cretini, Kari Foster; Piazza, Sarai C.; Sharp, Leigh Anne; Snedden, Gregg A.; Sapkota, Sijan

    2010-01-01

    The impacts of Hurricanes Katrina and Rita in 2005 on wetland vegetation were investigated in Louisiana coastal marshes. Vegetation cover, pore-water salinity, and nutrients data from 100 marsh sites covering the entire Louisiana coast were sampled for two consecutive growing seasons after the storms. A mixed-model nested ANOVA with Tukey's HSD test for post-ANOVA multiple comparisons was used to analyze the data. Significantly (p<0.05) lower vegetation cover was observed within brackish and fresh marshes in the west as compared to the east and central regions throughout 2006, but considerable increase in vegetation cover was noticed in fall 2007 data. Marshes in the west were stressed by prolonged saltwater logging and increased sulfide content. High salinity levels persisted throughout the study period for all marsh types, especially in the west. The marshes of coastal Louisiana are still recovering after the hurricanes; however, changes in the species composition have increased in these marshes.

  20. Marine habitat mapping, classification and monitoring in the coastal North Sea: Scientific vs. stakeholder interests

    NASA Astrophysics Data System (ADS)

    Hass, H. Christian; Mielck, Finn; Papenmeier, Svenja; Fiorentino, Dario

    2016-04-01

    Producing detailed maps of the seafloor that include both, water depth and simple textural characteristics has always been a challenge to scientists. In this context, marine habitat maps are an essential tool to comprehend the complexity, the spatial distribution and the ecological status of different seafloor types. The increasing need for more detail demands additional information on the texture of the sediment, bedforms and information on benthic sessile life. For long time, taking samples and videos/photographs followed by interpolation over larger distances was the only feasible way to gain information about sedimentary features such as grain-size distribution and bedforms. While ground truthing is still necessary, swath systems such as multibeam echo sounders (MBES) and sidescan sonars (SSS), as well as single beam acoustic ground discrimination systems (AGDS) became available to map the seafloor area-wide (MBES, SSS), fast and in great detail. Where area-wide measurements are impossible or unavailable point measurements are interpolated, classified and modeled. To keep pace with environmental change in the highly dynamic coastal areas of the North Sea (here: German Bight) monitoring that utilizes all of the mentioned techniques is a necessity. Since monitoring of larger areas is quite expensive, concepts for monitoring strategies were developed in scientific projects such as "WIMO" ("Scientific monitoring concepts for the German Bight, SE North Sea"). While instrumentation becomes better and better and interdisciplinary methods are being developed, the gap between basic scientific interests and stakeholder needs often seem to move in opposite directions. There are two main tendencies: the need to better understand nature systems (for theoretical purposes) and the one to simplify nature (for applied purposes). Science trends to resolve the most detail in highest precision employing soft gradients and/or fuzzy borders instead of crisp demarcations and

  1. Genetic analysis of threatened Australian grayling Prototroctes maraena suggests recruitment to coastal rivers from an unstructured marine larval source population.

    PubMed

    Schmidt, D J; Crook, D A; O'Connor, J P; Hughes, J M

    2011-01-01

    Population genetic variation of Australian grayling Prototroctes maraena was examined to determine whether the dispersal strategy of this amphidromous species favours retention of larvae and juveniles in close proximity to their natal river, or mixing of populations via marine dispersal. Variation in microsatellite and mitochondrial DNA markers was unstructured and differentiation was indistinguishable from zero across four coastal rivers spanning approximately one-quarter of the continental range of the species. This result indicates that the marine larval and juvenile phase probably facilitates extensive gene flow among coastal rivers and agrees with a previous analysis of otolith chemistry that suggested larvae probably move into the sea rather than remain in estuaries. It appears likely that the dispersal strategy of P. maraena would enable recolonization of rivers that experience localized extinction provided that connectivity between freshwater habitats and the sea is sufficient to permit migration and that enough source populations remain intact to support viability of the wider population.

  2. Macroalgal blooms alter community structure and primary productivity in marine ecosystems.

    PubMed

    Lyons, Devin A; Arvanitidis, Christos; Blight, Andrew J; Chatzinikolaou, Eva; Guy-Haim, Tamar; Kotta, Jonne; Orav-Kotta, Helen; Queirós, Ana M; Rilov, Gil; Somerfield, Paul J; Crowe, Tasman P

    2014-09-01

    Eutrophication, coupled with loss of herbivory due to habitat degradation and overharvesting, has increased the frequency and severity of macroalgal blooms worldwide. Macroalgal blooms interfere with human activities in coastal areas, and sometimes necessitate costly algal removal programmes. They also have many detrimental effects on marine and estuarine ecosystems, including induction of hypoxia, release of toxic hydrogen sulphide into the sediments and atmosphere, and the loss of ecologically and economically important species. However, macroalgal blooms can also increase habitat complexity, provide organisms with food and shelter, and reduce other problems associated with eutrophication. These contrasting effects make their overall ecological impacts unclear. We conducted a systematic review and meta-analysis to estimate the overall effects of macroalgal blooms on several key measures of ecosystem structure and functioning in marine ecosystems. We also evaluated some of the ecological and methodological factors that might explain the highly variable effects observed in different studies. Averaged across all studies, macroalgal blooms had negative effects on the abundance and species richness of marine organisms, but blooms by different algal taxa had different consequences, ranging from strong negative to strong positive effects. Blooms' effects on species richness also depended on the habitat where they occurred, with the strongest negative effects seen in sandy or muddy subtidal habitats and in the rocky intertidal. Invertebrate communities also appeared to be particularly sensitive to blooms, suffering reductions in their abundance, species richness, and diversity. The total net primary productivity, gross primary productivity, and respiration of benthic ecosystems were higher during macroalgal blooms, but blooms had negative effects on the productivity and respiration of other organisms. These results suggest that, in addition to their direct social and

  3. Modelling accumulation of marine plastics in the coastal zone; what are the dominant physical processes?

    NASA Astrophysics Data System (ADS)

    Critchell, Kay; Lambrechts, Jonathan

    2016-03-01

    Anthropogenic marine debris, mainly of plastic origin, is accumulating in estuarine and coastal environments around the world causing damage to fauna, flora and habitats. Plastics also have the potential to accumulate in the food web, as well as causing economic losses to tourism and sea-going industries. If we are to manage this increasing threat, we must first understand where debris is accumulating and why these locations are different to others that do not accumulate large amounts of marine debris. This paper demonstrates an advection-diffusion model that includes beaching, settling, resuspension/re-floating, degradation and topographic effects on the wind in nearshore waters to quantify the relative importance of these physical processes governing plastic debris accumulation. The aim of this paper is to prioritise research that will improve modelling outputs in the future. We have found that the physical characteristic of the source location has by far the largest effect on the fate of the debris. The diffusivity, used to parameterise the sub-grid scale movements, and the relationship between debris resuspension/re-floating from beaches and the wind shadow created by high islands also has a dramatic impact on the modelling results. The rate of degradation of macroplastics into microplastics also have a large influence in the result of the modelling. The other processes presented (settling, wind drift velocity) also help determine the fate of debris, but to a lesser degree. These findings may help prioritise research on physical processes that affect plastic accumulation, leading to more accurate modelling, and subsequently management in the future.

  4. Random error analysis of marine xCO2 measurements in a coastal upwelling region

    NASA Astrophysics Data System (ADS)

    Reimer, Janet J.; Cueva, Alejandro; Gaxiola-Castro, Gilberto; Lara-Lara, Ruben; Vargas, Rodrigo

    2016-04-01

    Quantifying and identifying measurement error is an ongoing challenge for carbon cycle science to constrain measurable uncertainty related to the sources and sinks of CO2. One source of uncertainty in measurements is derived from random errors (ε); thus, it is important to quantify their magnitude and their relationship to environmental variability in order to constrain local-to-global carbon budgets. We applied a paired-observation method to determine ε associated with marine xCO2 in a coastal upwelling zone of an eastern boundary current. Continuous data (3-h resolution) from a mooring platform during upwelling and non-upwelling seasons was analyzed off of northern Baja California in the California Current. To test the rigor of the algorithm to calculate ε we propose a method for determining daily mean time series values that may be affected by ε. To do this we used either two or three variables in the function, but no significant differences for ε mean values were found due to the large variability in ε (-0.088 ± 27 ppm for two variables and -0.057 ± 28 ppm for three variables). Mean ε values were centered on zero, with low values of ε more frequent than greater values, and follow a double exponential distribution. Random error variability increased with higher magnitudes of xCO2, and in general, ε variability increased in relation to upwelling conditions (up to ∼9% of measurements). Increased ε during upwelling suggests the importance of meso-scale processes on ε variability and could have a large influence seasonal to annual CO2 estimates. This approach could be extended and modified to other marine carbonate system variables as part of data quality assurance/quality control and to quantify uncertainty (due to ε) from a wide variety of continuous oceanographic monitoring platforms.

  5. Small copepods structuring mesozooplankton community dynamics in a tropical estuary-coastal system

    NASA Astrophysics Data System (ADS)

    Rakhesh, M.; Raman, A. V.; Ganesh, T.; Chandramohan, P.; Dehairs, F.

    2013-07-01

    It is important to know the ultimate role of small copepods in structuring mesozooplankton community pattern and diversity on an estuary-coastal gradient. Here multivariate analyses were used to elucidate this in the Godavari estuary, on the east coast of India. During May 2002, corresponding to the spring intermonsoon, mesozooplankton were sampled from 4 GPS fixed stations in the estuarine reaches of River Godavari and 19 in the coastal waters where Godavari enters the Bay of Bengal. There were 91 mesozooplankton taxa represented by 23 divergent groups. Copepods were by far the most prominent in terms of species richness, numerical abundance, and widespread distribution followed by appendicularians. Small copepods of families Paracalanidae, Acartiidae, Oithonidae, Corycaeidae, Oncaeidae, and Euterpinidae dominated. There were differing regional mesozooplankton/copepod communities, that segregated the estuary-coastal sites into different biotic assemblages: Group-I representing the estuary proper, Group-II estuary mouth and near shore, Group-III the intermediate coastal stations and Group-IV the coastal-offshore waters. Alpha (SRp, H', J', Δ*) and beta diversity (MVDISP, β, β-dissimilarity) measures varied noticeably across these assemblages/areas. The significant correlation of small copepod abundance with total mesozooplankton abundance and biomass (mgDM.m-3) in the estuarine (r: 0.40) and coastal (r: 0.46-0.83) waters together with a regression analysis of diversity measures have revealed the importance of small copepods in the overall mesozooplankton/copepod community structure. There were 'characterizing' and 'discriminating' species, responsible for the observed assemblage patterns. Mesozooplankton/copepod community structure and the size-spectra observed during this study indicate an estuarine-coastal gradient in plankton tropho-dynamics that may shift between a microbial dominated system inside the estuary and mixotrophy in the coastal waters. The

  6. Differential responses of marine communities to natural and anthropogenic changes

    PubMed Central

    Kowalewski, Michał; Wittmer, Jacalyn M.; Dexter, Troy A.; Amorosi, Alessandro; Scarponi, Daniele

    2015-01-01

    Responses of ecosystems to environmental changes vary greatly across habitats, organisms and observational scales. The Quaternary fossil record of the Po Basin demonstrates that marine communities of the northern Adriatic re-emerged unchanged following the most recent glaciation, which lasted approximately 100 000 years. The Late Pleistocene and Holocene interglacial ecosystems were both dominated by the same species, species turnover rates approximated predictions of resampling models of a homogeneous system, and comparable bathymetric gradients in species composition, sample-level diversity, dominance and specimen abundance were observed in both time intervals. The interglacial Adriatic ecosystems appear to have been impervious to natural climate change either owing to their persistence during those long-term perturbations or their resilient recovery during interglacial phases of climate oscillations. By contrast, present-day communities of the northern Adriatic differ notably from their Holocene counterparts. The recent ecosystem shift stands in contrast to the long-term endurance of interglacial communities in face of climate-driven environmental changes. PMID:25673689

  7. Differential responses of marine communities to natural and anthropogenic changes.

    PubMed

    Kowalewski, Michał; Wittmer, Jacalyn M; Dexter, Troy A; Amorosi, Alessandro; Scarponi, Daniele

    2015-03-22

    Responses of ecosystems to environmental changes vary greatly across habitats, organisms and observational scales. The Quaternary fossil record of the Po Basin demonstrates that marine communities of the northern Adriatic re-emerged unchanged following the most recent glaciation, which lasted approximately 100,000 years. The Late Pleistocene and Holocene interglacial ecosystems were both dominated by the same species, species turnover rates approximated predictions of resampling models of a homogeneous system, and comparable bathymetric gradients in species composition, sample-level diversity, dominance and specimen abundance were observed in both time intervals. The interglacial Adriatic ecosystems appear to have been impervious to natural climate change either owing to their persistence during those long-term perturbations or their resilient recovery during interglacial phases of climate oscillations. By contrast, present-day communities of the northern Adriatic differ notably from their Holocene counterparts. The recent ecosystem shift stands in contrast to the long-term endurance of interglacial communities in face of climate-driven environmental changes. PMID:25673689

  8. Evidence for Distinct Coastal and Offshore Communities of Bottlenose Dolphins in the North East Atlantic

    PubMed Central

    Oudejans, Machiel G.; Visser, Fleur; Englund, Anneli; Rogan, Emer; Ingram, Simon N.

    2015-01-01

    Bottlenose dolphin stock structure in the northeast Atlantic remains poorly understood. However, fine scale photo-id data have shown that populations can comprise multiple overlapping social communities. These social communities form structural elements of bottlenose dolphin (Tursiops truncatus) populations, reflecting specific ecological and behavioural adaptations to local habitats. We investigated the social structure of bottlenose dolphins in the waters of northwest Ireland and present evidence for distinct inshore and offshore social communities. Individuals of the inshore community had a coastal distribution restricted to waters within 3 km from shore. These animals exhibited a cohesive, fission-fusion social organisation, with repeated resightings within the research area, within a larger coastal home range. The offshore community comprised one or more distinct groups, found significantly further offshore (>4 km) than the inshore animals. In addition, dorsal fin scarring patterns differed significantly between inshore and offshore communities with individuals of the offshore community having more distinctly marked dorsal fins. Specifically, almost half of the individuals in the offshore community (48%) had characteristic stereotyped damage to the tip of the dorsal fin, rarely recorded in the inshore community (7%). We propose that this characteristic is likely due to interactions with pelagic fisheries. Social segregation and scarring differences found here indicate that the distinct communities are likely to be spatially and behaviourally segregated. Together with recent genetic evidence of distinct offshore and coastal population structures, this provides evidence for bottlenose dolphin inshore/offshore community differentiation in the northeast Atlantic. We recommend that social communities should be considered as fundamental units for the management and conservation of bottlenose dolphins and their habitat specialisations. PMID:25853823

  9. Evidence for distinct coastal and offshore communities of bottlenose dolphins in the north east Atlantic.

    PubMed

    Oudejans, Machiel G; Visser, Fleur; Englund, Anneli; Rogan, Emer; Ingram, Simon N

    2015-01-01

    Bottlenose dolphin stock structure in the northeast Atlantic remains poorly understood. However, fine scale photo-id data have shown that populations can comprise multiple overlapping social communities. These social communities form structural elements of bottlenose dolphin (Tursiops truncatus) [corrected] populations, reflecting specific ecological and behavioural adaptations to local habitats. We investigated the social structure of bottlenose dolphins in the waters of northwest Ireland and present evidence for distinct inshore and offshore social communities. Individuals of the inshore community had a coastal distribution restricted to waters within 3 km from shore. These animals exhibited a cohesive, fission-fusion social organisation, with repeated resightings within the research area, within a larger coastal home range. The offshore community comprised one or more distinct groups, found significantly further offshore (>4 km) than the inshore animals. In addition, dorsal fin scarring patterns differed significantly between inshore and offshore communities with individuals of the offshore community having more distinctly marked dorsal fins. Specifically, almost half of the individuals in the offshore community (48%) had characteristic stereotyped damage to the tip of the dorsal fin, rarely recorded in the inshore community (7%). We propose that this characteristic is likely due to interactions with pelagic fisheries. Social segregation and scarring differences found here indicate that the distinct communities are likely to be spatially and behaviourally segregated. Together with recent genetic evidence of distinct offshore and coastal population structures, this provides evidence for bottlenose dolphin inshore/offshore community differentiation in the northeast Atlantic. We recommend that social communities should be considered as fundamental units for the management and conservation of bottlenose dolphins and their habitat specialisations.

  10. Phylogenetic analysis of particle-attached and free-living bacterial communities in the Columbia river, its estuary, and the adjacent coastal ocean.

    PubMed

    Crump, B C; Armbrust, E V; Baross, J A

    1999-07-01

    The Columbia River estuary is a dynamic system in which estuarine turbidity maxima trap and extend the residence time of particles and particle-attached bacteria over those of the water and free-living bacteria. Particle-attached bacteria dominate bacterial activity in the estuary and are an important part of the estuarine food web. PCR-amplified 16S rRNA genes from particle-attached and free-living bacteria in the Columbia River, its estuary, and the adjacent coastal ocean were cloned, and 239 partial sequences were determined. A wide diversity was observed at the species level within at least six different bacterial phyla, including most subphyla of the class Proteobacteria. In the estuary, most particle-attached bacterial clones (75%) were related to members of the genus Cytophaga or of the alpha, gamma, or delta subclass of the class Proteobacteria. These same clones, however, were rare in or absent from either the particle-attached or the free-living bacterial communities of the river and the coastal ocean. In contrast, about half (48%) of the free-living estuarine bacterial clones were similar to clones from the river or the coastal ocean. These free-living bacteria were related to groups of cosmopolitan freshwater bacteria (beta-proteobacteria, gram-positive bacteria, and Verrucomicrobium spp.) and groups of marine organisms (gram-positive bacteria and alpha-proteobacteria [SAR11 and Rhodobacter spp.]). These results suggest that rapidly growing particle-attached bacteria develop into a uniquely adapted estuarine community and that free-living estuarine bacteria are similar to members of the river and the coastal ocean microbial communities. The high degree of diversity in the estuary is the result of the mixing of bacterial communities from the river, estuary, and coastal ocean.

  11. Assessment of Metal Toxicity in Marine Ecosystems: Comparative Toxicity Potentials for Nine Cationic Metals in Coastal Seawater.

    PubMed

    Dong, Yan; Rosenbaum, Ralph K; Hauschild, Michael Z

    2016-01-01

    This study is a first attempt to develop globally applicable and spatially differentiated marine comparative toxicity potentials (CTPs) or ecotoxicity characterization factors for metals in coastal seawater for use in life cycle assessment. The toxicity potentials are based exclusively on marine ecotoxicity data and take account of metal speciation and bioavailability. CTPs were developed for nine cationic metals (Cd, Cr(III), Co, Cu(II), Fe(III), Mn, Ni, Pb, and Zn) in 64 large marine ecosystems (LMEs) covering all coastal waters in the world. The results showed that the CTP of a specific metal varies 3-4 orders of magnitude across LMEs, largely due to different seawater residence times. Therefore, the highest toxicity potential for metals was found in the LMEs with the longest seawater residence times. Across metals, the highest CTPs were observed for Cd, Pb, and Zn. At the concentration levels occurring in coastal seawaters, Fe acts not as a toxic agent but as an essential nutrient and thus has CTPs of zero.

  12. The relationship between Holocene cultural site distribution and marine terrace uplift on the coast fringing Coastal Range, Taiwan

    NASA Astrophysics Data System (ADS)

    Yang, Hsiaochin; Chen, Wenshan

    2013-04-01

    According to the collision of Philippine Sea plate and Eurasia plate, a series of left-lateral active faults with reverse sense exists in the Longitudinal Valley of east Taiwan. The Holocene marine terraces along the east coast of the Coastal Range in Taiwan are well known for their very rapid uplift and record tectonic history of this active collision boundary. The Holocene marine terrace sequence resulting from successive sea level change and tectonic activation is subdivided into several steps where the highest and oldest terrace, back to ca 13,000yr BP, reaches up to ca 80 m above sea level, and the lower terraces are mostly erosional ones, overlain by less than 1m thick coral beds in situ. The uplift of the coast is very high, ranging from 5 to 10 m/ka. According to the fabrics of potsherds and geochronological data, the prehistoric cultures in eastern Taiwan could be classified into three stages: Fushan (ca 5000-3500yr BP), Peinan/Chilin (ca3500-2000yr BP), Kweishan (ca2000-1000 yr BP) and Jinpu (ca 1000-400yr BP) cultural assemblages respectively. A great difference exists between the various cultural stage, not only the pottery making techniques, but also the distributions of archaeological sites. Combined with the dynamic geomorphic evolution of marine terraces and the distribution of prehistoric culture sites on the east coast of the Coastal Range, a coastal migration trend could be established.

  13. Ascaridoid parasites infecting in the frequently consumed marine fishes in the coastal area of China: A preliminary investigation.

    PubMed

    Zhao, Wen-Ting; Lü, Liang; Chen, Hui-Xia; Yang, Yue; Zhang, Lu-Ping; Li, Liang

    2016-04-01

    Marine fishes represent the important components of the diet in the coastal areas of China and they are also natural hosts of various parasites. However, to date, little is known about the occurrence of ascaridoid parasites in the frequently consumed marine fishes in China. In order to determine the presence of ascaridoid parasites in the frequently consumed marine fishes in the coastal town Huizhou, Guangdong Province, China, 211 fish representing 45 species caught from the South China Sea (off Daya Gulf) were examined. Five species of ascaridoid nematodes at different developmental stages were detected in the marine fishes examined herein, including third-stage larva of Anisakis typica (Diesing, 1860), third and fourth-stage larvae of Hysterothylacium sp. IV-A of Shamsi, Gasser & Beveridge, 2013, adult and third-stage larvae of Hysterothylacium zhoushanense Li, Liu & Zhang, 2014, adults and third-stage larvae of Raphidascaris lophii (Wu, 1949) and adults of Raphidascaris longispicula Li, Liu & Zhang, 2012. The overall prevalence of infection is 18.0%. Of them, Hysterothylacium sp. IV-A with the highest prevalence (17.5%) and intensity (mean=14.6) of infection was the predominant species. The prevalence and intensity of A. typica were very low (1/211 of marine fish infected with an intensity of one parasite per fish). The morphological and molecular characterization of all nematode species was provided. A cladistic analysis based on ITS sequence was constructed in order to determine the phylogenetic relationships of these ascaridoid parasites obtained herein. The present study provided important information on the occurrence and diagnosis of ascaridoid nematodes in the commercially important marine fishes from the South China Sea. The low level of infection and the species composition of ascaridoid nematodes seem to indicate the presence of low risk of human anisakidosis when local population consumed these marine fishes examined herein.

  14. Ascaridoid parasites infecting in the frequently consumed marine fishes in the coastal area of China: A preliminary investigation.

    PubMed

    Zhao, Wen-Ting; Lü, Liang; Chen, Hui-Xia; Yang, Yue; Zhang, Lu-Ping; Li, Liang

    2016-04-01

    Marine fishes represent the important components of the diet in the coastal areas of China and they are also natural hosts of various parasites. However, to date, little is known about the occurrence of ascaridoid parasites in the frequently consumed marine fishes in China. In order to determine the presence of ascaridoid parasites in the frequently consumed marine fishes in the coastal town Huizhou, Guangdong Province, China, 211 fish representing 45 species caught from the South China Sea (off Daya Gulf) were examined. Five species of ascaridoid nematodes at different developmental stages were detected in the marine fishes examined herein, including third-stage larva of Anisakis typica (Diesing, 1860), third and fourth-stage larvae of Hysterothylacium sp. IV-A of Shamsi, Gasser & Beveridge, 2013, adult and third-stage larvae of Hysterothylacium zhoushanense Li, Liu & Zhang, 2014, adults and third-stage larvae of Raphidascaris lophii (Wu, 1949) and adults of Raphidascaris longispicula Li, Liu & Zhang, 2012. The overall prevalence of infection is 18.0%. Of them, Hysterothylacium sp. IV-A with the highest prevalence (17.5%) and intensity (mean=14.6) of infection was the predominant species. The prevalence and intensity of A. typica were very low (1/211 of marine fish infected with an intensity of one parasite per fish). The morphological and molecular characterization of all nematode species was provided. A cladistic analysis based on ITS sequence was constructed in order to determine the phylogenetic relationships of these ascaridoid parasites obtained herein. The present study provided important information on the occurrence and diagnosis of ascaridoid nematodes in the commercially important marine fishes from the South China Sea. The low level of infection and the species composition of ascaridoid nematodes seem to indicate the presence of low risk of human anisakidosis when local population consumed these marine fishes examined herein. PMID:26546570

  15. Community composition has greater impact on the functioning of marine phytoplankton communities than ocean acidification.

    PubMed

    Eggers, Sarah L; Lewandowska, Aleksandra M; Barcelos E Ramos, Joana; Blanco-Ameijeiras, Sonia; Gallo, Francesca; Matthiessen, Birte

    2014-03-01

    Ecosystem functioning is simultaneously affected by changes in community composition and environmental change such as increasing atmospheric carbon dioxide (CO2 ) and subsequent ocean acidification. However, it largely remains uncertain how the effects of these factors compare to each other. Addressing this question, we experimentally tested the hypothesis that initial community composition and elevated CO2 are equally important to the regulation of phytoplankton biomass. We full-factorially exposed three compositionally different marine phytoplankton communities to two different CO2 levels and examined the effects and relative importance (ω(2) ) of the two factors and their interaction on phytoplankton biomass at bloom peak. The results showed that initial community composition had a significantly greater impact than elevated CO2 on phytoplankton biomass, which varied largely among communities. We suggest that the different initial ratios between cyanobacteria, diatoms, and dinoflagellates might be the key for the varying competitive and thus functional outcome among communities. Furthermore, the results showed that depending on initial community composition elevated CO2 selected for larger sized diatoms, which led to increased total phytoplankton biomass. This study highlights the relevance of initial community composition, which strongly drives the functional outcome, when assessing impacts of climate change on ecosystem functioning. In particular, the increase in phytoplankton biomass driven by the gain of larger sized diatoms in response to elevated CO2 potentially has strong implications for nutrient cycling and carbon export in future oceans.

  16. Transcriptomic analysis of a marine bacterial community enriched with dimethylsulfoniopropionate.

    PubMed

    Vila-Costa, Maria; Rinta-Kanto, Johanna M; Sun, Shulei; Sharma, Shalabh; Poretsky, Rachel; Moran, Mary Ann

    2010-11-01

    Dimethylsulfoniopropionate (DMSP) is an important source of reduced sulfur and carbon for marine microbial communities, as well as the precursor of the climate-active gas dimethylsulfide (DMS). In this study, we used metatranscriptomic sequencing to analyze gene expression profiles of a bacterial assemblage from surface waters at the Bermuda Atlantic Time-series Study (BATS) station with and without a short-term enrichment of DMSP (25 nM for 30 min). An average of 303 143 reads were obtained per treatment using 454 pyrosequencing technology, of which 51% were potential protein-encoding sequences. Transcripts from Gammaproteobacteria and Bacteroidetes increased in relative abundance on DMSP addition, yet there was little change in the contribution of two bacterioplankton groups whose cultured members harbor known DMSP degradation genes, Roseobacter and SAR11. The DMSP addition led to an enrichment of transcripts supporting heterotrophic activity, and a depletion of those encoding light-related energy generation. Genes for the degradation of C3 compounds were significantly overrepresented after DMSP addition, likely reflecting the metabolism of the C3 component of DMSP. Mapping these transcripts to known biochemical pathways indicated that both acetyl-CoA and succinyl-CoA may be common entry points of this moiety into the tricarboxylic acid cycle. In a short time frame (30 min) in the extremely oligotrophic Sargasso Sea, different gene expression patterns suggest the use of DMSP by a diversity of marine bacterioplankton as both carbon and sulfur sources. PMID:20463763

  17. Transcriptomic analysis of a marine bacterial community enriched with dimethylsulfoniopropionate.

    PubMed

    Vila-Costa, Maria; Rinta-Kanto, Johanna M; Sun, Shulei; Sharma, Shalabh; Poretsky, Rachel; Moran, Mary Ann

    2010-11-01

    Dimethylsulfoniopropionate (DMSP) is an important source of reduced sulfur and carbon for marine microbial communities, as well as the precursor of the climate-active gas dimethylsulfide (DMS). In this study, we used metatranscriptomic sequencing to analyze gene expression profiles of a bacterial assemblage from surface waters at the Bermuda Atlantic Time-series Study (BATS) station with and without a short-term enrichment of DMSP (25 nM for 30 min). An average of 303 143 reads were obtained per treatment using 454 pyrosequencing technology, of which 51% were potential protein-encoding sequences. Transcripts from Gammaproteobacteria and Bacteroidetes increased in relative abundance on DMSP addition, yet there was little change in the contribution of two bacterioplankton groups whose cultured members harbor known DMSP degradation genes, Roseobacter and SAR11. The DMSP addition led to an enrichment of transcripts supporting heterotrophic activity, and a depletion of those encoding light-related energy generation. Genes for the degradation of C3 compounds were significantly overrepresented after DMSP addition, likely reflecting the metabolism of the C3 component of DMSP. Mapping these transcripts to known biochemical pathways indicated that both acetyl-CoA and succinyl-CoA may be common entry points of this moiety into the tricarboxylic acid cycle. In a short time frame (30 min) in the extremely oligotrophic Sargasso Sea, different gene expression patterns suggest the use of DMSP by a diversity of marine bacterioplankton as both carbon and sulfur sources.

  18. Temporal and spatial diversity of bacterial communities in coastal waters of the South china sea.

    PubMed

    Du, Jikun; Xiao, Kai; Li, Li; Ding, Xian; Liu, Helu; Lu, Yongjun; Zhou, Shining

    2013-01-01

    Bacteria are recognized as important drivers of biogeochemical processes in all aquatic ecosystems. Temporal and geographical patterns in ocean bacterial communities have been observed in many studies, but the temporal and spatial patterns in the bacterial communities from the South China Sea remained unexplored. To determine the spatiotemporal patterns, we generated 16S rRNA datasets for 15 samples collected from the five regularly distributed sites of the South China Sea in three seasons (spring, summer, winter). A total of 491 representative sequences were analyzed by MOTHUR, yielding 282 operational taxonomic units (OTUs) grouped at 97% stringency. Significant temporal variations of bacterial diversity were observed. Richness and diversity indices indicated that summer samples were the most diverse. The main bacterial group in spring and summer samples was Alphaproteobacteria, followed by Cyanobacteria and Gammaproteobacteria, whereas Cyanobacteria dominated the winter samples. Spatial patterns in the samples were observed that samples collected from the coastal (D151, D221) waters and offshore (D157, D1512, D224) waters clustered separately, the coastal samples harbored more diverse bacterial communities. However, the temporal pattern of the coastal site D151 was contrary to that of the coastal site D221. The LIBSHUFF statistics revealed noticeable differences among the spring, summer and winter libraries collected at five sites. The UPGMA tree showed there were temporal and spatial heterogeneity of bacterial community composition in coastal waters of the South China Sea. The water salinity (P=0.001) contributed significantly to the bacteria-environment relationship. Our results revealed that bacterial community structures were influenced by environmental factors and community-level changes in 16S-based diversity were better explained by spatial patterns than by temporal patterns.

  19. Effects of olive oil wastes on river basins and an oligotrophic coastal marine ecosystem: a case study in Greece.

    PubMed

    Pavlidou, A; Anastasopoulou, E; Dassenakis, M; Hatzianestis, I; Paraskevopoulou, V; Simboura, N; Rousselaki, E; Drakopoulou, P

    2014-11-01

    This work aims to contribute to the knowledge of the impacts of olive oil waste discharge to freshwater and oligotrophic marine environments, since the ecological impact of olive oil wastes in riverine and coastal marine ecosystems, which are the final repositories of the pollutants, is a great environmental problem on a global scale, mostly concerning all the Mediterranean countries with olive oil production. Messinia, in southwestern Greece, is one of the greatest olive oil production areas in Europe. During the last decade around 1.4×10(6)tons of olive oil mill wastewater has been disposed in the rivers of Messinia and finally entered the marine ecosystem of Messiniakos gulf. The pollution from olive oil mill wastewater in the main rivers of Messinia and the oligotrophic coastal zone of Messiniakos gulf and its effects on marine organisms were evaluated, before, during and after the olive oil production period. Elevated amounts of phenols (36.2-178 mg L(-1)) and high concentrations of ammonium (7.29-18.9 mmol L(-1)) and inorganic phosphorus (0.5-7.48 mmol L(-1)) were measured in small streams where the liquid disposals from several olive oil industries were gathered before their discharge in the major rivers of Messinia. The large number of olive oil units has downgraded the riverine and marine ecosystems during the productive period and a period more than five months is needed for the recovery of the ecosystem. Statistical analysis showed that the enrichment of freshwater and the coastal zone of Messiniakos gulf in ammonia, nitrite, phenols, total organic carbon, copper, manganese and nickel was directly correlated with the wastes from olive oil. Toxicity tests using 24h LC50 Palaemonidae shrimp confirm that olive mill wastewater possesses very high toxicity in the aquatic environment. PMID:25112823

  20. Effects of olive oil wastes on river basins and an oligotrophic coastal marine ecosystem: a case study in Greece.

    PubMed

    Pavlidou, A; Anastasopoulou, E; Dassenakis, M; Hatzianestis, I; Paraskevopoulou, V; Simboura, N; Rousselaki, E; Drakopoulou, P

    2014-11-01

    This work aims to contribute to the knowledge of the impacts of olive oil waste discharge to freshwater and oligotrophic marine environments, since the ecological impact of olive oil wastes in riverine and coastal marine ecosystems, which are the final repositories of the pollutants, is a great environmental problem on a global scale, mostly concerning all the Mediterranean countries with olive oil production. Messinia, in southwestern Greece, is one of the greatest olive oil production areas in Europe. During the last decade around 1.4×10(6)tons of olive oil mill wastewater has been disposed in the rivers of Messinia and finally entered the marine ecosystem of Messiniakos gulf. The pollution from olive oil mill wastewater in the main rivers of Messinia and the oligotrophic coastal zone of Messiniakos gulf and its effects on marine organisms were evaluated, before, during and after the olive oil production period. Elevated amounts of phenols (36.2-178 mg L(-1)) and high concentrations of ammonium (7.29-18.9 mmol L(-1)) and inorganic phosphorus (0.5-7.48 mmol L(-1)) were measured in small streams where the liquid disposals from several olive oil industries were gathered before their discharge in the major rivers of Messinia. The large number of olive oil units has downgraded the riverine and marine ecosystems during the productive period and a period more than five months is needed for the recovery of the ecosystem. Statistical analysis showed that the enrichment of freshwater and the coastal zone of Messiniakos gulf in ammonia, nitrite, phenols, total organic carbon, copper, manganese and nickel was directly correlated with the wastes from olive oil. Toxicity tests using 24h LC50 Palaemonidae shrimp confirm that olive mill wastewater possesses very high toxicity in the aquatic environment.

  1. Massive marine methane emissions from near-shore shallow coastal areas.

    PubMed

    Borges, Alberto V; Champenois, Willy; Gypens, Nathalie; Delille, Bruno; Harlay, Jérôme

    2016-01-01

    Methane is the second most important greenhouse gas contributing to climate warming. The open ocean is a minor source of methane to the atmosphere. We report intense methane emissions from the near-shore southern region of the North Sea characterized by the presence of extensive areas with gassy sediments. The average flux intensities (~130 μmol m(-2) d(-1)) are one order of magnitude higher than values characteristic of continental shelves (~30 μmol m(-2) d(-1)) and three orders of magnitude higher than values characteristic of the open ocean (~0.4 μmol m(-2) d(-1)). The high methane concentrations (up to 1,128 nmol L(-1)) that sustain these fluxes are related to the shallow and well-mixed water column that allows an efficient transfer of methane from the seafloor to surface waters. This differs from deeper and stratified seep areas where there is a large decrease of methane between bottom and surface by microbial oxidation or physical transport. Shallow well-mixed continental shelves represent about 33% of the total continental shelf area, so that marine coastal methane emissions are probably under-estimated. Near-shore and shallow seep areas are hot spots of methane emission, and our data also suggest that emissions could increase in response to warming of surface waters. PMID:27283125

  2. Remote sensing and in situ observations of marine slicks associated with inhomogeneous coastal currents

    NASA Astrophysics Data System (ADS)

    Ermakov, S.; Kapustin, I.; Sergievskaya, I.

    2011-11-01

    Field observations co-located and simultaneous with satellite radar imagery of biogenic slick bands on the sea surface aimed to study relation between slicks and marine stream currents were carried out in the coastal zone of the Black Sea. Measurements of the current velocities at different depths were performed using an acoustic Doppler current profiler (ADCP) and surface floats. Samples of surfactant films inside/outside slick bands were collected from the water surface with nets. The sampled films were reconstructed in laboratory conditions and measurements of the damping coefficient of gravity-capillary waves and the surface tension were carried out using an original parametric wave method. It is obtained that the banded slicks are characterized by enhanced concentration of surfactants due to their compression by convergent current components. The slicks are revealed to be oriented along the stream currents and are located in the zones of current shears. Small convergent transverse velocity components are observed near slick boundaries and are responsible for slick formation in stream shear currents. Different examples of slicks formed by stream shear current are described. Results of a case study of two streams of different directions merging and forming a banded slick in a shear zone with convergent transverse current components are presented. Another case study is when a flow below a thermocline coming to the shore meets a bottom slope and a vertical current occurs resulting in horizontal divergence and convergence on the surface.

  3. Massive marine methane emissions from near-shore shallow coastal areas

    PubMed Central

    Borges, Alberto V.; Champenois, Willy; Gypens, Nathalie; Delille, Bruno; Harlay, Jérôme

    2016-01-01

    Methane is the second most important greenhouse gas contributing to climate warming. The open ocean is a minor source of methane to the atmosphere. We report intense methane emissions from the near-shore southern region of the North Sea characterized by the presence of extensive areas with gassy sediments. The average flux intensities (~130 μmol m−2 d−1) are one order of magnitude higher than values characteristic of continental shelves (~30 μmol m−2 d−1) and three orders of magnitude higher than values characteristic of the open ocean (~0.4 μmol m−2 d−1). The high methane concentrations (up to 1,128 nmol L−1) that sustain these fluxes are related to the shallow and well-mixed water column that allows an efficient transfer of methane from the seafloor to surface waters. This differs from deeper and stratified seep areas where there is a large decrease of methane between bottom and surface by microbial oxidation or physical transport. Shallow well-mixed continental shelves represent about 33% of the total continental shelf area, so that marine coastal methane emissions are probably under-estimated. Near-shore and shallow seep areas are hot spots of methane emission, and our data also suggest that emissions could increase in response to warming of surface waters. PMID:27283125

  4. Characterization of Salmonella enterica Serovar Typhimurium from Marine Environments in Coastal Waters of Galicia (Spain)

    PubMed Central

    Martinez-Urtaza, Jaime; Liebana, Ernesto; Garcia-Migura, Lourdes; Perez-Piñeiro, Pelayo; Saco, Montserrat

    2004-01-01

    Twenty-three Salmonella enterica serovar Typhimurium isolates from marine environments were characterized by phage typing, pulsed-field gel electrophoresis (PFGE) analysis, plasmid analysis, and antibiotic resistance, and the distribution of the different types in the coastal waters were subsequently analyzed. Five phage types were identified among the isolates (PT41, PT135, PT99, DT104, and DT193). PT135 isolates were exclusively detected during the winter months from 1998 to 2000, whereas DT104 and PT41 isolates were detected exclusively in the summer months from 2000 to 2002. XbaI PFGE analysis revealed 9 PFGE types, and plasmid profiling identified 8 plasmid types (with 1 to 6 plasmids) among the isolates. Only three isolates presented multidrug resistance to antibiotics. Two DT104 isolates were resistant to 8 and 7 antibiotics (profiles ACCeFNaSSuT and ACeFNeSSuT), whereas a PT193 isolate presented resistance to 6 antibiotics (profile ACFSSu). In addition, four PT41 isolates were resistant to a single antibiotic. The detection of multidrug-resistant phage types DT104 and DT193 in shellfish emphasizes the importance of monitoring the presence of Salmonella in routine surveillance of live bivalve molluscs. PMID:15240279

  5. Characterization of Salmonella enterica serovar typhimurium from marine environments in coastal waters of Galicia (Spain).

    PubMed

    Martinez-Urtaza, Jaime; Liebana, Ernesto; Garcia-Migura, Lourdes; Perez-Piñeiro, Pelayo; Saco, Montserrat

    2004-07-01

    Twenty-three Salmonella enterica serovar Typhimurium isolates from marine environments were characterized by phage typing, pulsed-field gel electrophoresis (PFGE) analysis, plasmid analysis, and antibiotic resistance, and the distribution of the different types in the coastal waters were subsequently analyzed. Five phage types were identified among the isolates (PT41, PT135, PT99, DT104, and DT193). PT135 isolates were exclusively detected during the winter months from 1998 to 2000, whereas DT104 and PT41 isolates were detected exclusively in the summer months from 2000 to 2002. XbaI PFGE analysis revealed 9 PFGE types, and plasmid profiling identified 8 plasmid types (with 1 to 6 plasmids) among the isolates. Only three isolates presented multidrug resistance to antibiotics. Two DT104 isolates were resistant to 8 and 7 antibiotics (profiles ACCeFNaSSuT and ACeFNeSSuT), whereas a PT193 isolate presented resistance to 6 antibiotics (profile ACFSSu). In addition, four PT41 isolates were resistant to a single antibiotic. The detection of multidrug-resistant phage types DT104 and DT193 in shellfish emphasizes the importance of monitoring the presence of Salmonella in routine surveillance of live bivalve molluscs.

  6. Massive marine methane emissions from near-shore shallow coastal areas

    NASA Astrophysics Data System (ADS)

    Borges, Alberto V.; Champenois, Willy; Gypens, Nathalie; Delille, Bruno; Harlay, Jérôme

    2016-06-01

    Methane is the second most important greenhouse gas contributing to climate warming. The open ocean is a minor source of methane to the atmosphere. We report intense methane emissions from the near-shore southern region of the North Sea characterized by the presence of extensive areas with gassy sediments. The average flux intensities (~130 μmol m‑2 d‑1) are one order of magnitude higher than values characteristic of continental shelves (~30 μmol m‑2 d‑1) and three orders of magnitude higher than values characteristic of the open ocean (~0.4 μmol m‑2 d‑1). The high methane concentrations (up to 1,128 nmol L‑1) that sustain these fluxes are related to the shallow and well-mixed water column that allows an efficient transfer of methane from the seafloor to surface waters. This differs from deeper and stratified seep areas where there is a large decrease of methane between bottom and surface by microbial oxidation or physical transport. Shallow well-mixed continental shelves represent about 33% of the total continental shelf area, so that marine coastal methane emissions are probably under-estimated. Near-shore and shallow seep areas are hot spots of methane emission, and our data also suggest that emissions could increase in response to warming of surface waters.

  7. Massive marine methane emissions from near-shore shallow coastal areas.

    PubMed

    Borges, Alberto V; Champenois, Willy; Gypens, Nathalie; Delille, Bruno; Harlay, Jérôme

    2016-01-01

    Methane is the second most important greenhouse gas contributing to climate warming. The open ocean is a minor source of methane to the atmosphere. We report intense methane emissions from the near-shore southern region of the North Sea characterized by the presence of extensive areas with gassy sediments. The average flux intensities (~130 μmol m(-2) d(-1)) are one order of magnitude higher than values characteristic of continental shelves (~30 μmol m(-2) d(-1)) and three orders of magnitude higher than values characteristic of the open ocean (~0.4 μmol m(-2) d(-1)). The high methane concentrations (up to 1,128 nmol L(-1)) that sustain these fluxes are related to the shallow and well-mixed water column that allows an efficient transfer of methane from the seafloor to surface waters. This differs from deeper and stratified seep areas where there is a large decrease of methane between bottom and surface by microbial oxidation or physical transport. Shallow well-mixed continental shelves represent about 33% of the total continental shelf area, so that marine coastal methane emissions are probably under-estimated. Near-shore and shallow seep areas are hot spots of methane emission, and our data also suggest that emissions could increase in response to warming of surface waters.

  8. Do pharmaceuticals bioaccumulate in marine molluscs and fish from a coastal lagoon?

    PubMed

    Moreno-González, R; Rodríguez-Mozaz, S; Huerta, B; Barceló, D; León, V M

    2016-04-01

    The bioaccumulation of 20 pharmaceuticals in cockle (Cerastodema glaucum), noble pen shell (Pinna nobilis), sea snail (Murex trunculus), golden grey mullet (Liza aurata) and black goby (Gobius niger) was evaluated, considering their distribution throughout the Mar Menor lagoon and their variations in spring and autumn 2010. The analytical procedure was adapted for the different matrices as being sensitive and reproducible. Eighteen out of the 20 compounds analysed were found at low ngg(-1) in these species throughout the lagoon. Hydrochlorothiazide and carbamazepine were detected in all species considered. The bioaccumulation of pharmaceuticals was heterogeneous in the lagoon, with a higher number of pharmaceuticals being detected in fish (18) than in wild molluscs (8), particularly in golden grey mullet muscle (16). В-blockers and psychiatric drugs were preferentially bioccumulated in fish and hydrochlorothiazide was also confirmed in caged clams. The higher detection frequency and concentrations found in golden grey mullet suggested that mugilids could be used as an indicator of contamination by pharmaceuticals in coastal areas. To the best of our knowledge, this is the first study that shows data about hydrochlorothiazide, levamisole and codeine in wild marine biota. PMID:26775009

  9. Adjustment of the summertime marine atmospheric boundary layer to the western Iberia coastal morphology

    NASA Astrophysics Data System (ADS)

    Monteiro, Isabel T.; Santos, Aires J.; Belo-Pereira, Margarida; Oliveira, Paulo B.

    2016-04-01

    During summer (June, July, and August), northerly winds driven by the Azores anticyclone are prevalent over western Iberia. The Quick Scatterometer Satellite 2000 to 2009 summertime estimates reveal a broad high wind speed (≥7 ms-1) area extending about 300 km from shore and along the entire Iberian west coast. Nested in this large high-speed region, preferred maximum regions anchored in the Iberian major capes, Finisterre, Roca, and S. Vicente, are found. Composite analyses of wind maxima were performed to diagnose the typical summertime synoptic-scale pressure distribution associated with these smaller size high-speed regions. The flow low-level structure was further studied with a mesoscale numerical prediction model for three northerly events characterized by typical summertime synoptic conditions. A low-level coastal jet, setting the background conditions to the marine atmospheric boundary layer (MABL) response to topography, was found in the three cases. The causes for wind maximum downwind capes were investigated, focusing on the hypothesis that western Iberia MABL responds to hydraulic forcing. For the three events supercritical and transcritical flow conditions were identified and expansion fan signatures were found downwind each cape. Aircraft measurements, performed during one of the events, gave additional evidence of the expansion fan leeward Cape Roca. The importance of other forcing mechanisms was also assessed by considering the hypothesis of downslope wind acceleration and found to be in direct conflict with soundings and surface observations.

  10. Understanding and Meeting the Needs of Coastal Communities for Climate Change Information

    NASA Astrophysics Data System (ADS)

    Harte, M.; Lach, D.

    2007-12-01

    Climate change has touched the lives of many coastal residents. Yet, as a focus of community outreach efforts, climate change remains a challenging endeavor that is often conducted with a "one-size-fits-all" approach that often polarizes debate rather than informs discussion and learning about climate change. While it may seem obvious to scientists and disseminators of science that coastal residents can benefit from climate information as they deal with changes in the environment, it may not be so obvious to coastal residents just what they should do with the information. Existing management regimes, infrastructure, and practices - all developed over time to respond to a wide range of climate conditions - may, with some modification, be able to manage threats to coastal communities through the foreseeable future. In this sense, adaptation to climate variability has been and continues to be an on-going and iterative process for coastal communities. We posit that residents' experiences mediate their perceptions and attitudes towards climate change, climate variability and global warming. We also postulate that greater recognition of the experiential dimension of risk perception has fundamental implications for the type and mode of information about climate change sought by coastal communities. If this is true, extension and outreach materials on climate change provided by science communicators may need a fundamental makeover to better reflect the experiences of its target audiences. This includes accepting that information provision about climate variability, climate change and global warming is a fundamentally different activity than attempting to gain acceptance for collective action or to change individual behaviors.

  11. Contribution of Marine Group II Euryarchaeota to cyclopentyl tetraethers in the Pearl River estuary and coastal South China Sea: impact on the TEX86 paleothermometer

    NASA Astrophysics Data System (ADS)

    Wang, J. X.; Zhang, C. L.; Xie, W.; Zhang, Y. G.; Wang, P.

    2015-08-01

    TEX86 (TetraEther indeX of glycerol dialkyl glycerol tetraethers (GDGTs) with 86 carbon atoms) has been widely applied to reconstruct (paleo-) sea surface temperature (SST). While Marine Group I (MG I) Thaumarchaeota have been commonly believed to be the source for GDGTs, Marine Group II (MG II Euryarchaeota) have recently been suggested to contribute significantly to the GDGT pool in the ocean. However, little is known how the MG II Euryarchaeota-derived GDGTs may influence TEX86 in marine sediment record. In this study, we characterize MG II Euryarchaeota-produced GDGTs and assess the likely effect of these tetraether lipids on TEX86. Analyses of core lipid (CL-) and intact polar lipid (IPL-) based GDGTs, 454 sequencing and quantitative polymerase chain reaction (qPCR) targeting MG II Euryarchaeota were performed on suspended particulate matter (SPM) and surface sediments collected along a salinity gradient from the lower Pearl River (river water) and its estuary (mixing water) to the coastal South China Sea (seawater). The results showed that the community composition varied along the salinity gradient with MG II Euryarchaeota as the second dominant group in the mixing water and seawater. qPCR data indicated that the abundance of MG II Euryarchaeota in the mixing water was three to four orders of magnitude higher than the river water and seawater. Significant linear correlations were observed between the gene abundance ratio of MG II Euryarchaeota vs. total archaea and the relative abundance of GDGTs-1, -2, -3, or -4 as well as the ring index based on these compounds, which collectively suggest that MG II Euryarchaeota may actively produce GDGTs in the water column. These results also show strong evidence that MG II Euryarchaeota synthesizing GDGTs with 1-4 cyclopentane moieties may bias TEX86 in the water column and sediments. This study highlights that valid interpretation of TEX86 in sediment record, particularly in coastal oceans, needs to consider the

  12. Vegetation associations in a rare community type - Coastal tallgrass prairie

    USGS Publications Warehouse

    Grace, J.B.; Allain, L.; Allen, C.

    2000-01-01

    The coastal prairie ecoregion is located along the northwestern coastal plain of the Gulf of Mexico in North America. Because of agricultural and urban development, less than 1% of the original 3.4 million ha of this ecosystem type remains in native condition, making it one of the most endangered ecosystems in North America. The objective of this study was to characterize the vegetation and environmental relationships in a relatively pristine example of lowland coastal prairie in order to provide information for use in conservation and restoration. The study area was a small, isolated prairie located near the southern boundary of the coastal prairie region. Samples were taken along three parallel transects that spanned the prairie. Parameters measured included species composition, elevation, soil characteristics, indications of recent disturbance, above-ground biomass, and light penetration through the plant canopy. Fifty-four species were found in the 107 0.25-m2 plots and a total of 96 species were found at the site. Only two non-native species occurred in sample plots, both of which were uncommon. Cluster analysis was used to identify six vegetation groups, which were primarily dominated by members of the Poaceae or Asteraceae. A conspicuous, natural edaphic feature of the prairie was the presence of 'mima' mounds, which are raised areas approximately 0.5 to 1 m high and 5 to 10 m across. Indicator species analysis revealed a significant number of species that were largely restricted to mounds and these were predominately upland and colonizing species. Ordination was performed using nonmetric, multidimensional scaling. The dominant environmental influence on species composition was found to be elevation and a host of correlated factors including those associated with soil organic content. A secondary group of factors, consisting primarily of soil cations, was found to explain additional variance among plots. Overall, this prairie was found to contain plant

  13. The Gut Bacterial Community of Mammals from Marine and Terrestrial Habitats

    PubMed Central

    Nelson, Tiffanie M.; Rogers, Tracey L.; Brown, Mark V.

    2013-01-01

    After birth, mammals acquire a community of bacteria in their gastro-intestinal tract, which harvests energy and provides nutrients for the host. Comparative studies of numerous terrestrial mammal hosts have identified host phylogeny, diet and gut morphology as primary drivers of the gut bacterial community composition. To date, marine mammals have been excluded from these comparative studies, yet they represent distinct examples of evolutionary history, diet and lifestyle traits. To provide an updated understanding of the gut bacterial community of mammals, we compared bacterial 16S rRNA gene sequence data generated from faecal material of 151 marine and terrestrial mammal hosts. This included 42 hosts from a marine habitat. When compared to terrestrial mammals, marine mammals clustered separately and displayed a significantly greater average relative abundance of the phylum Fusobacteria. The marine carnivores (Antarctic and Arctic seals) and the marine herbivore (dugong) possessed significantly richer gut bacterial community than terrestrial carnivores and terrestrial herbivores, respectively. This suggests that evolutionary history and dietary items specific to the marine environment may have resulted in a gut bacterial community distinct to that identified in terrestrial mammals. Finally we hypothesize that reduced marine trophic webs, whereby marine carnivores (and herbivores) feed directly on lower trophic levels, may expose this group to high levels of secondary metabolites and influence gut microbial community richness. PMID:24386245

  14. Development of a cost-effective metabarcoding strategy for analysis of the marine phytoplankton community.

    PubMed

    Yoon, Tae-Ho; Kang, Hye-Eun; Kang, Chang-Keun; Lee, Sang Heon; Ahn, Do-Hwan; Park, Hyun; Kim, Hyun-Woo

    2016-01-01

    We developed a cost-effective metabarcoding strategy to analyze phytoplankton community structure using the Illumina MiSeq system. The amplicons (404-411 bp) obtained by end-pairing of two reads were sufficiently long to distinguish algal species and provided barcode data equivalent to those generated with the Roche 454 system, but at less than 1/20th of the cost. The original universal primer sequences targeting the 23S rDNA region and the PCR strategy were both modified, and this resulted in higher numbers of eukaryotic algal sequences by excluding non-photosynthetic proteobacterial sequences supporting effectiveness of this strategy. The novel strategy was used to analyze the phytoplankton community structure of six water samples from the East/Japan Sea: surface and 50 m depths at coastal and open-sea sites, with collections in May and July 2014. In total, 345 operational taxonomic units (OTUs) were identified, which covered most of the prokaryotic and eukaryotic algal phyla, including Dinophyta, Rhodophyta, Ochrophyta, Chlorophyta, Streptophyta, Cryptophyta, Haptophyta, and Cyanophyta. This highlights the importance of plastid 23S primers, which perform better than the currently used 16S primers for phytoplankton community surveys. The findings also revealed that more efforts should be made to update 23S rDNA sequences as well as those of 16S in the databases. Analysis of algal proportions in the six samples showed that community structure differed depending on location, depth and season. Across the six samples evaluated, the numbers of OTUs in each phylum were similar but their relative proportions varied. This novel strategy would allow laboratories to analyze large numbers of samples at reasonable expense, whereas this has not been possible to date due to cost and time. In addition, we expect that this strategy will generate a large amount of novel data that could potentially change established methods and tools that are currently used in the realms of

  15. Development of a cost-effective metabarcoding strategy for analysis of the marine phytoplankton community

    PubMed Central

    Yoon, Tae-Ho; Kang, Hye-Eun; Kang, Chang-Keun; Lee, Sang Heon; Ahn, Do-Hwan

    2016-01-01

    We developed a cost-effective metabarcoding strategy to analyze phytoplankton community structure using the Illumina MiSeq system. The amplicons (404–411 bp) obtained by end-pairing of two reads were sufficiently long to distinguish algal species and provided barcode data equivalent to those generated with the Roche 454 system, but at less than 1/20th of the cost. The original universal primer sequences targeting the 23S rDNA region and the PCR strategy were both modified, and this resulted in higher numbers of eukaryotic algal sequences by excluding non-photosynthetic proteobacterial sequences supporting effectiveness of this strategy. The novel strategy was used to analyze the phytoplankton community structure of six water samples from the East/Japan Sea: surface and 50 m depths at coastal and open-sea sites, with collections in May and July 2014. In total, 345 operational taxonomic units (OTUs) were identified, which covered most of the prokaryotic and eukaryotic algal phyla, including Dinophyta, Rhodophyta, Ochrophyta, Chlorophyta, Streptophyta, Cryptophyta, Haptophyta, and Cyanophyta. This highlights the importance of plastid 23S primers, which perform better than the currently used 16S primers for phytoplankton community surveys. The findings also revealed that more efforts should be made to update 23S rDNA sequences as well as those of 16S in the databases. Analysis of algal proportions in the six samples showed that community structure differed depending on location, depth and season. Across the six samples evaluated, the numbers of OTUs in each phylum were similar but their relative proportions varied. This novel strategy would allow laboratories to analyze large numbers of samples at reasonable expense, whereas this has not been possible to date due to cost and time. In addition, we expect that this strategy will generate a large amount of novel data that could potentially change established methods and tools that are currently used in the realms of

  16. Development of a cost-effective metabarcoding strategy for analysis of the marine phytoplankton community.

    PubMed

    Yoon, Tae-Ho; Kang, Hye-Eun; Kang, Chang-Keun; Lee, Sang Heon; Ahn, Do-Hwan; Park, Hyun; Kim, Hyun-Woo

    2016-01-01

    We developed a cost-effective metabarcoding strategy to analyze phytoplankton community structure using the Illumina MiSeq system. The amplicons (404-411 bp) obtained by end-pairing of two reads were sufficiently long to distinguish algal species and provided barcode data equivalent to those generated with the Roche 454 system, but at less than 1/20th of the cost. The original universal primer sequences targeting the 23S rDNA region and the PCR strategy were both modified, and this resulted in higher numbers of eukaryotic algal sequences by excluding non-photosynthetic proteobacterial sequences supporting effectiveness of this strategy. The novel strategy was used to analyze the phytoplankton community structure of six water samples from the East/Japan Sea: surface and 50 m depths at coastal and open-sea sites, with collections in May and July 2014. In total, 345 operational taxonomic units (OTUs) were identified, which covered most of the prokaryotic and eukaryotic algal phyla, including Dinophyta, Rhodophyta, Ochrophyta, Chlorophyta, Streptophyta, Cryptophyta, Haptophyta, and Cyanophyta. This highlights the importance of plastid 23S primers, which perform better than the currently used 16S primers for phytoplankton community surveys. The findings also revealed that more efforts should be made to update 23S rDNA sequences as well as those of 16S in the databases. Analysis of algal proportions in the six samples showed that community structure differed depending on location, depth and season. Across the six samples evaluated, the numbers of OTUs in each phylum were similar but their relative proportions varied. This novel strategy would allow laboratories to analyze large numbers of samples at reasonable expense, whereas this has not been possible to date due to cost and time. In addition, we expect that this strategy will generate a large amount of novel data that could potentially change established methods and tools that are currently used in the realms of

  17. Palaeotsunamis and their significance for prehistoric coastal communities

    NASA Astrophysics Data System (ADS)

    Goff, J. R.

    2011-12-01

    The damage caused by large tsunamis to human populations at the coast has been all too evident over the past few years. However, while we have seen the immediate after-effects of such events, we are less familiar with the longer term changes associated with them. Using prehistoric New Zealand as a case study, the talk first addresses the wider geological context associated with a tsunami - what caused it and what were the consequences for the physical environment? Prehistoric Maori lived predominantly in coastal settlements, particularly during their early settlement period. They had far ranging canoe trade routes and made widespread use of intertidal and coastal resources. As such it is possible to determine much of the ecological and societal ramifications of a 15th century tsunami inundation. The 15th century tsunami is recorded in numerous purakau or oral recordings. These form part of Maori Traditional Environmental Knowledge (TEK), but the event can also be identified through archaeological, geological and palaeo-ecological indicators. One of several purakau from the 15th century refers to the "Coming of the Sand". This centres on a place called Potiki-taua, where Potiki and his group settled. Mango-huruhuru, the old priest, built a large house on low land near the sea while Potiki-roa and his wife put theirs on higher ground further inland. Mango-huruhuru's house had a rocky beach in front of it that was unsuitable for landing canoes and so he decided to use his powers to bring sand from Hawaiki. After sunset he sat on his roof and recited a karakia (prayer/chant). On conclusion a dark cloud with its burden of sand reached the shore. The women called out "A! The sea rises; the waves and the sand will overwhelm us". The people fell where they stood and were buried in the sand along with the house and cultivations and all the surrounding country, and with them, the old priest and his youngest daughter (memorialised and turned into a rock which stands there

  18. Hypernatremia in Dice Snakes (Natrix tessellata) from a Coastal Population: Implications for Osmoregulation in Marine Snake Prototypes

    PubMed Central

    Brischoux, François; Kornilev, Yurii V.

    2014-01-01

    The widespread relationship between salt excreting structures (e.g., salt glands) and marine life strongly suggests that the ability to regulate salt balance has been crucial during the transition to marine life in tetrapods. Elevated natremia (plasma sodium) recorded in several marine snakes species suggests that the development of a tolerance toward hypernatremia, in addition to salt gland development, has been a critical feature in the evolution of marine snakes. However, data from intermediate stage (species lacking salt glands but occasionally using salty environments) are lacking to draw a comprehensive picture of the evolution of an euryhaline physiology in these organisms. In this study, we assessed natremia of free-ranging Dice snakes (Natrix tessellata, a predominantly fresh water natricine lacking salt glands) from a coastal population in Bulgaria. Our results show that coastal N. tessellata can display hypernatremia (up to 195.5 mmol.l−1) without any apparent effect on several physiological and behavioural traits (e.g., hematocrit, body condition, foraging). More generally, a review of natremia in species situated along a continuum of habitat use between fresh- and seawater shows that snake species display a concomitant tolerance toward hypernatremia, even in species lacking salt glands. Collectively, these data suggest that a physiological tolerance toward hypernatremia has been critical during the evolution of an euryhaline physiology, and may well have preceded the evolution of salt glands. PMID:24658047

  19. Hypernatremia in Dice snakes (Natrix tessellata) from a coastal population: implications for osmoregulation in marine snake prototypes.

    PubMed

    Brischoux, François; Kornilev, Yurii V

    2014-01-01

    The widespread relationship between salt excreting structures (e.g., salt glands) and marine life strongly suggests that the ability to regulate salt balance has been crucial during the transition to marine life in tetrapods. Elevated natremia (plasma sodium) recorded in several marine snakes species suggests that the development of a tolerance toward hypernatremia, in addition to salt gland development, has been a critical feature in the evolution of marine snakes. However, data from intermediate stage (species lacking salt glands but occasionally using salty environments) are lacking to draw a comprehensive picture of the evolution of an euryhaline physiology in these organisms. In this study, we assessed natremia of free-ranging Dice snakes (Natrix tessellata, a predominantly fresh water natricine lacking salt glands) from a coastal population in Bulgaria. Our results show that coastal N. tessellata can display hypernatremia (up to 195.5 mmol x l(-1)) without any apparent effect on several physiological and behavioural traits (e.g., hematocrit, body condition, foraging). More generally, a review of natremia in species situated along a continuum of habitat use between fresh- and seawater shows that snake species display a concomitant tolerance toward hypernatremia, even in species lacking salt glands. Collectively, these data suggest that a physiological tolerance toward hypernatremia has been critical during the evolution of an euryhaline physiology, and may well have preceded the evolution of salt glands.

  20. Hypernatremia in Dice snakes (Natrix tessellata) from a coastal population: implications for osmoregulation in marine snake prototypes.

    PubMed

    Brischoux, François; Kornilev, Yurii V

    2014-01-01

    The widespread relationship between salt excreting structures (e.g., salt glands) and marine life strongly suggests that the ability to regulate salt balance has been crucial during the transition to marine life in tetrapods. Elevated natremia (plasma sodium) recorded in several marine snakes species suggests that the development of a tolerance toward hypernatremia, in addition to salt gland development, has been a critical feature in the evolution of marine snakes. However, data from intermediate stage (species lacking salt glands but occasionally using salty environments) are lacking to draw a comprehensive picture of the evolution of an euryhaline physiology in these organisms. In this study, we assessed natremia of free-ranging Dice snakes (Natrix tessellata, a predominantly fresh water natricine lacking salt glands) from a coastal population in Bulgaria. Our results show that coastal N. tessellata can display hypernatremia (up to 195.5 mmol x l(-1)) without any apparent effect on several physiological and behavioural traits (e.g., hematocrit, body condition, foraging). More generally, a review of natremia in species situated along a continuum of habitat use between fresh- and seawater shows that snake species display a concomitant tolerance toward hypernatremia, even in species lacking salt glands. Collectively, these data suggest that a physiological tolerance toward hypernatremia has been critical during the evolution of an euryhaline physiology, and may well have preceded the evolution of salt glands. PMID:24658047

  1. Resilience and adjustments of surface sediment bacterial communities in an enclosed shallow coastal lagoon, Magdalen Islands, Gulf of St. Lawrence, Canada.

    PubMed

    Mohit, Vani; Archambault, Philippe; Lovejoy, Connie

    2015-05-01

    Bacteria regulate global biogeochemical cycles and much of this activity occurs in shallow coastal sediments; however, little is known of the seasonality or how changes in environmental conditions influence the active sediment bacterial communities. Havre-aux-Maisons (Magdalen Islands, Canada), a relatively pristine enclosed shallow coastal lagoon, is of particular biological interest since it has no inflowing rivers and provides an opportunity to investigate non-estuarine shallow marine sediments. Potentially active taxa in surface sediments were identified over a 15-month period using high-throughput rRNA amplicon sequencing. Sediment bacterial communities were diverse at the species level, with high Beta diversity. Throughout most of the sampling period, communities consisted of taxa that were closely related to each other, suggesting that specific environmental conditions at a given time point favored taxa with similar ecological traits. However, bacterial phyla and proteobacterial classes were remarkably similar over time with a predominantly sulfur cycling community composed of sulfur-oxidizing Gammaproteobacteria and sulfate-reducing Deltaproteobacteria persisting over much of the sampling period, despite the oxygenated water column. This community was disrupted after a storm and less common phyla became relatively more abundant. Following this disruption, a high proportion of benthic Cyanobacteria colonized the sediment before the reestablishment of the sulfur-cycle-dominated community.

  2. Hydrodynamic Based Decision Making Framework for Impact Assessment of Extreme Storm Events on Coastal Communities

    NASA Astrophysics Data System (ADS)

    Nazari, R.; Miller, K.; Hurler, C.

    2015-12-01

    Coastal and inland flooding has been a problematic occurrence, specifically over the past century. Global warming has caused an 8 inch sea level rise since 1990, which made the coastal flood zone wider, deeper and more damaging. Additionally, riverine flooding is extremely damaging to the country's substructure and economy as well which causes river banks to overflow, inundating low-lying areas. New Jersey and New York are two areas at severe risk for flood hazard, sea level rise, land depletion and economic loss which are the main study area of this work. A decision making framework is being built to help mitigate the impacts of the environmental and economical dangers of storm surges, sea level rise, flashfloods and inland flooding. With vigorous research and the use of innovative hydrologic modeling software, this tool can be built and utilized to form resiliency for coastal communities. This will allow the individuals living in a coastal community to understand the details of climatic hazards in their area and risks associated to their communities. This tool will also suggest the best solution for the problem each community faces. Atlantic City and New York City has been modeled and compared using potential storm events and the outcomes have been analyzed. The tool offers all the possible solutions for the type of flooding that occurs. Green infrastructure such as rain gardens, detention basins and green roofs can be used as small scale solutions. Greater scale solutions such as removable flood barriers, concrete walls and height adjustable walls will also be displayed if that poses as the best solution. The results and benefits from the simulation and modeling techniques, will allow coastal communities to choose the most appropriate method for building a long lasting and sustainable resilience plan in the future.

  3. The Fate of Marine Bacterial Exopolysaccharide in Natural Marine Microbial Communities

    SciTech Connect

    Zhang, Zilian; Chen, Yi; Wang, Rui; Cai, Ruanhong; Fu, Yingnan; Jiao, Nianzhi; Quigg, Antonietta

    2015-11-16

    Most marine bacteria produce exopolysaccharides (EPS), and bacterial EPS represent an important source of dissolved organic carbon in marine ecosystems. It was proposed that bacterial EPS rich in uronic acid is resistant to mineralization by microbes and thus has a long residence time in global oceans. To confirm this hypothesis, bacterial EPS rich in galacturonic acid was isolated from Alteromonas sp. JL2810. The EPS was used to amend natural seawater to investigate the bioavailability of this EPS by native populations, in the presence and absence of ammonium and phosphate amendment. The data indicated that the bacterial EPS could not be completely consumed during the cultivation period and that the bioavailability of EPS was not only determined by its intrinsic properties, but was also determined by other factors such as the availability of inorganic nutrients. During the experiment, the humic-like component of fluorescent dissolved organic matter (FDOM) was freshly produced. Bacterial community structure analysis indicated that the class Flavobacteria of the phylum Bacteroidetes was the major contributor for the utilization of EPS. This report is the first to indicate that Flavobacteria are a major contributor to bacterial EPS degradation. Finally, the fraction of EPS that could not be completely utilized and the FDOM (e.g., humic acid-like substances) produced de novo may be refractory and may contribute to the carbon storage in the oceans.

  4. The Fate of Marine Bacterial Exopolysaccharide in Natural Marine Microbial Communities

    DOE PAGES

    Zhang, Zilian; Chen, Yi; Wang, Rui; Cai, Ruanhong; Fu, Yingnan; Jiao, Nianzhi; Quigg, Antonietta

    2015-11-16

    Most marine bacteria produce exopolysaccharides (EPS), and bacterial EPS represent an important source of dissolved organic carbon in marine ecosystems. It was proposed that bacterial EPS rich in uronic acid is resistant to mineralization by microbes and thus has a long residence time in global oceans. To confirm this hypothesis, bacterial EPS rich in galacturonic acid was isolated from Alteromonas sp. JL2810. The EPS was used to amend natural seawater to investigate the bioavailability of this EPS by native populations, in the presence and absence of ammonium and phosphate amendment. The data indicated that the bacterial EPS could not bemore » completely consumed during the cultivation period and that the bioavailability of EPS was not only determined by its intrinsic properties, but was also determined by other factors such as the availability of inorganic nutrients. During the experiment, the humic-like component of fluorescent dissolved organic matter (FDOM) was freshly produced. Bacterial community structure analysis indicated that the class Flavobacteria of the phylum Bacteroidetes was the major contributor for the utilization of EPS. This report is the first to indicate that Flavobacteria are a major contributor to bacterial EPS degradation. Finally, the fraction of EPS that could not be completely utilized and the FDOM (e.g., humic acid-like substances) produced de novo may be refractory and may contribute to the carbon storage in the oceans.« less

  5. The Fate of Marine Bacterial Exopolysaccharide in Natural Marine Microbial Communities

    PubMed Central

    Zhang, Zilian; Chen, Yi; Wang, Rui; Cai, Ruanhong; Fu, Yingnan; Jiao, Nianzhi

    2015-01-01

    Most marine bacteria produce exopolysaccharides (EPS), and bacterial EPS represent an important source of dissolved organic carbon in marine ecosystems. It was proposed that bacterial EPS rich in uronic acid is resistant to mineralization by microbes and thus has a long residence time in global oceans. To confirm this hypothesis, bacterial EPS rich in galacturonic acid was isolated from Alteromonas sp. JL2810. The EPS was used to amend natural seawater to investigate the bioavailability of this EPS by native populations, in the presence and absence of ammonium and phosphate amendment. The data indicated that the bacterial EPS could not be completely consumed during the cultivation period and that the bioavailability of EPS was not only determined by its intrinsic properties, but was also determined by other factors such as the availability of inorganic nutrients. During the experiment, the humic-like component of fluorescent dissolved organic matter (FDOM) was freshly produced. Bacterial community structure analysis indicated that the class Flavobacteria of the phylum Bacteroidetes was the major contributor for the utilization of EPS. This report is the first to indicate that Flavobacteria are a major contributor to bacterial EPS degradation. The fraction of EPS that could not be completely utilized and the FDOM (e.g., humic acid-like substances) produced de novo may be refractory and may contribute to the carbon storage in the oceans. PMID:26571122

  6. The Fate of Marine Bacterial Exopolysaccharide in Natural Marine Microbial Communities.

    PubMed

    Zhang, Zilian; Chen, Yi; Wang, Rui; Cai, Ruanhong; Fu, Yingnan; Jiao, Nianzhi

    2015-01-01

    Most marine bacteria produce exopolysaccharides (EPS), and bacterial EPS represent an important source of dissolved organic carbon in marine ecosystems. It was proposed that bacterial EPS rich in uronic acid is resistant to mineralization by microbes and thus has a long residence time in global oceans. To confirm this hypothesis, bacterial EPS rich in galacturonic acid was isolated from Alteromonas sp. JL2810. The EPS was used to amend natural seawater to investigate the bioavailability of this EPS by native populations, in the presence and absence of ammonium and phosphate amendment. The data indicated that the bacterial EPS could not be completely consumed during the cultivation period and that the bioavailability of EPS was not only determined by its intrinsic properties, but was also determined by other factors such as the availability of inorganic nutrients. During the experiment, the humic-like component of fluorescent dissolved organic matter (FDOM) was freshly produced. Bacterial community structure analysis indicated that the class Flavobacteria of the phylum Bacteroidetes was the major contributor for the utilization of EPS. This report is the first to indicate that Flavobacteria are a major contributor to bacterial EPS degradation. The fraction of EPS that could not be completely utilized and the FDOM (e.g., humic acid-like substances) produced de novo may be refractory and may contribute to the carbon storage in the oceans. PMID:26571122

  7. Environmental Gradients Explain Species Richness and Community Composition of Coastal Breeding Birds in the Baltic Sea

    PubMed Central

    Nord, Maria; Forslund, Pär

    2015-01-01

    Scientifically-based systematic conservation planning for reserve design requires knowledge of species richness patterns and how these are related to environmental gradients. In this study, we explore a large inventory of coastal breeding birds, in total 48 species, sampled in 4646 1 km2 squares which covered a large archipelago in the Baltic Sea on the east coast of Sweden. We analysed how species richness (α diversity) and community composition (β diversity) of two groups of coastal breeding birds (specialists, i.e. obligate coastal breeders; generalists, i.e. facultative coastal breeders) were affected by distance to open sea, land area, shoreline length and archipelago width. The total number of species per square increased with increasing shoreline length, but increasing land area counteracted this effect in specialists. The number of specialist bird species per square increased with decreasing distance to open sea, while the opposite was true for the generalists. Differences in community composition between squares were associated with differences in land area and distance to open sea, both when considering all species pooled and each group separately. Fourteen species were nationally red-listed, and showed similar relationships to the environmental gradients as did all species, specialists and generalists. We suggest that availability of suitable breeding habitats, and probably also proximity to feeding areas, explain much of the observed spatial distributions of coastal birds in this study. Our findings have important implications for systematic conservation planning of coastal breeding birds. In particular, we provide information on where coastal breeding birds occur and which environments they seem to prefer. Small land areas with long shorelines are highly valuable both in general and for red-listed species. Thus, such areas should be prioritized for protection against human disturbance and used by management in reserve selection. PMID:25714432

  8. Environmental gradients explain species richness and community composition of coastal breeding birds in the Baltic Sea.

    PubMed

    Nord, Maria; Forslund, Pär

    2015-01-01

    Scientifically-based systematic conservation planning for reserve design requires knowledge of species richness patterns and how these are related to environmental gradients. In this study, we explore a large inventory of coastal breeding birds, in total 48 species, sampled in 4646 1 km2 squares which covered a large archipelago in the Baltic Sea on the east coast of Sweden. We analysed how species richness (α diversity) and community composition (β diversity) of two groups of coastal breeding birds (specialists, i.e. obligate coastal breeders; generalists, i.e. facultative coastal breeders) were affected by distance to open sea, land area, shoreline length and archipelago width. The total number of species per square increased with increasing shoreline length, but increasing land area counteracted this effect in specialists. The number of specialist bird species per square increased with decreasing distance to open sea, while the opposite was true for the generalists. Differences in community composition between squares were associated with differences in land area and distance to open sea, both when considering all species pooled and each group separately. Fourteen species were nationally red-listed, and showed similar relationships to the environmental gradients as did all species, specialists and generalists. We suggest that availability of suitable breeding habitats, and probably also proximity to feeding areas, explain much of the observed spatial distributions of coastal birds in this study. Our findings have important implications for systematic conservation planning of coastal breeding birds. In particular, we provide information on where coastal breeding birds occur and which environments they seem to prefer. Small land areas with long shorelines are highly valuable both in general and for red-listed species. Thus, such areas should be prioritized for protection against human disturbance and used by management in reserve selection.

  9. Environmental gradients explain species richness and community composition of coastal breeding birds in the Baltic Sea.

    PubMed

    Nord, Maria; Forslund, Pär

    2015-01-01

    Scientifically-based systematic conservation planning for reserve design requires knowledge of species richness patterns and how these are related to environmental gradients. In this study, we explore a large inventory of coastal breeding birds, in total 48 species, sampled in 4646 1 km2 squares which covered a large archipelago in the Baltic Sea on the east coast of Sweden. We analysed how species richness (α diversity) and community composition (β diversity) of two groups of coastal breeding birds (specialists, i.e. obligate coastal breeders; generalists, i.e. facultative coastal breeders) were affected by distance to open sea, land area, shoreline length and archipelago width. The total number of species per square increased with increasing shoreline length, but increasing land area counteracted this effect in specialists. The number of specialist bird species per square increased with decreasing distance to open sea, while the opposite was true for the generalists. Differences in community composition between squares were associated with differences in land area and distance to open sea, both when considering all species pooled and each group separately. Fourteen species were nationally red-listed, and showed similar relationships to the environmental gradients as did all species, specialists and generalists. We suggest that availability of suitable breeding habitats, and probably also proximity to feeding areas, explain much of the observed spatial distributions of coastal birds in this study. Our findings have important implications for systematic conservation planning of coastal breeding birds. In particular, we provide information on where coastal breeding birds occur and which environments they seem to prefer. Small land areas with long shorelines are highly valuable both in general and for red-listed species. Thus, such areas should be prioritized for protection against human disturbance and used by management in reserve selection. PMID:25714432

  10. Global Coastal and Marine Spatial Planning (CMSP) from Space Based AIS Ship Tracking

    NASA Astrophysics Data System (ADS)

    Schwehr, K. D.; Foulkes, J. A.; Lorenzini, D.; Kanawati, M.

    2011-12-01

    All nations need to be developing long term integrated strategies for how to use and preserve our natural resources. As a part of these strategies, we must evalutate how communities of users react to changes in rules and regulations of ocean use. Global characterization of the vessel traffic on our Earth's oceans is essential to understanding the existing uses to develop international Coast and Marine Spatial Planning (CMSP). Ship traffic within 100-200km is beginning to be effectively covered in low latitudes by ground based receivers collecting position reports from the maritime Automatic Identification System (AIS). Unfortunately, remote islands, high latitudes, and open ocean Marine Protected Areas (MPA) are not covered by these ground systems. Deploying enough autonomous airborne (UAV) and surface (USV) vessels and buoys to provide adequate coverage is a difficult task. While the individual device costs are plummeting, a large fleet of AIS receivers is expensive to maintain. The global AIS coverage from SpaceQuest's low Earth orbit satellite receivers combined with the visualization and data storage infrastructure of Google (e.g. Maps, Earth, and Fusion Tables) provide a platform that enables researchers and resource managers to begin answer the question of how ocean resources are being utilized. Near real-time vessel traffic data will allow managers of marine resources to understand how changes to education, enforcement, rules, and regulations alter usage and compliance patterns. We will demonstrate the potential for this system using a sample SpaceQuest data set processed with libais which stores the results in a Fusion Table. From there, the data is imported to PyKML and visualized in Google Earth with a custom gx:Track visualization utilizing KML's extended data functionality to facilitate ship track interrogation. Analysts can then annotate and discuss vessel tracks in Fusion Tables.

  11. Dynamics of bacterial assemblages and removal of polycyclic aromatic hydrocarbons in oil-contaminated coastal marine sediments subjected to contrasted oxygen regimes.

    PubMed

    Militon, Cécile; Jézéquel, Ronan; Gilbert, Franck; Corsellis, Yannick; Sylvi, Léa; Cravo-Laureau, Cristiana; Duran, Robert; Cuny, Philippe

    2015-10-01

    To study the impact of oxygen regimes on the removal of polycylic aromatic hydrocarbons (PAHs) in oil-spill-affected coastal marine sediments, we used a thin-layer incubation method to ensure that the incubated sediment was fully oxic, anoxic, or was influenced by oxic-anoxic switches without sediment stirring. Hydrocarbon content and microbial assemblages were followed during 60 days to determine PAH degradation kinetics and microbial community dynamics according to the oxygenation regimes. The highest PAH removal, with 69 % reduction, was obtained at the end of the experiment under oxic conditions, whereas weaker removals were obtained under oscillating and anoxic conditions (18 and 12 %, respectively). Bacterial community structure during the experiment was determined using a dual 16S rRNA genes/16S rRNA transcripts approach, allowing the characterization of metabolically active bacteria responsible for the functioning of the bacterial community in the contaminated sediment. The shift of the metabolically active bacterial communities showed that the selection of first responders belonged to Pseudomonas spp. and Labrenzia sp. and included an unidentified Deltaproteobacteria-irrespective of the oxygen regime-followed by the selection of late responders adapted to the oxygen regime. A novel unaffiliated phylotype (B38) was highly active during the last stage of the experiment, at which time, the low-molecular-weight (LMW) PAH biodegradation rates were significant for permanent oxic- and oxygen-oscillating conditions, suggesting that this novel phylotype plays an active role during the restoration phase of the studied ecosystem.

  12. Dynamics of bacterial assemblages and removal of polycyclic aromatic hydrocarbons in oil-contaminated coastal marine sediments subjected to contrasted oxygen regimes.

    PubMed

    Militon, Cécile; Jézéquel, Ronan; Gilbert, Franck; Corsellis, Yannick; Sylvi, Léa; Cravo-Laureau, Cristiana; Duran, Robert; Cuny, Philippe

    2015-10-01

    To study the impact of oxygen regimes on the removal of polycylic aromatic hydrocarbons (PAHs) in oil-spill-affected coastal marine sediments, we used a thin-layer incubation method to ensure that the incubated sediment was fully oxic, anoxic, or was influenced by oxic-anoxic switches without sediment stirring. Hydrocarbon content and microbial assemblages were followed during 60 days to determine PAH degradation kinetics and microbial community dynamics according to the oxygenation regimes. The highest PAH removal, with 69 % reduction, was obtained at the end of the experiment under oxic conditions, whereas weaker removals were obtained under oscillating and anoxic conditions (18 and 12 %, respectively). Bacterial community structure during the experiment was determined using a dual 16S rRNA genes/16S rRNA transcripts approach, allowing the characterization of metabolically active bacteria responsible for the functioning of the bacterial community in the contaminated sediment. The shift of the metabolically active bacterial communities showed that the selection of first responders belonged to Pseudomonas spp. and Labrenzia sp. and included an unidentified Deltaproteobacteria-irrespective of the oxygen regime-followed by the selection of late responders adapted to the oxygen regime. A novel unaffiliated phylotype (B38) was highly active during the last stage of the experiment, at which time, the low-molecular-weight (LMW) PAH biodegradation rates were significant for permanent oxic- and oxygen-oscillating conditions, suggesting that this novel phylotype plays an active role during the restoration phase of the studied ecosystem. PMID:25997808

  13. Ecology of delta marshes of coastal Louisiana: a community profile

    SciTech Connect

    Gosselink, J.G.

    1984-05-01

    This report reviews and synthesizes ecological information and data on the extensive marshes of the Mississippi River Deltaic Plain. Over the past 6000 years the river has built a delta onto the Continental Shelf of the Gulf of Mexico covering about 23,900 km/sup 2/. This low land is primarily marshes and represents about 22% of the total coastal wetland area of the 48 conterminous United States. The delta is notable for its high primary productivity, its valuable fishery and fur industry, and the recreational fishing and hunting it supports. The Mississippi River delta marshes are subject to the unique problem of extremely rapid marsh degradation due to a complex mixture of natural processes and human activities that include worldwide sea-level rise; subsidence; navigation and extractive industry canal dredging; flood control measures that channel the river; and pollution from domestic sewage, exotic organic chemicals, and heavy metals. 262 references, 75 figures, 34 tables.

  14. A New Monitoring Network For The Integrated Knowledge of Marine Coastal Environment

    NASA Astrophysics Data System (ADS)

    Zappalà, G.; Azzaro, F.; Bergamasco, A.; Caruso, G.; Decembrini, F.; Crisafi, E.

    In the framework of the Cluster 10 MIUR, a program funded by the Italian Ministry for Scientific Research, an integrated coastal monitoring network is being developed and installed in selected areas of Southern Italy. The network comprises seven monitoring buoys and a small equipped boat. The buoys will be deployed on 15-25 meters depth in positions chosen to investigate coastal waters state and quality in areas subjected to human induced alterations (both of industrial or urban origin) in Messina Strait (Messina), Southern Tyrrhenian (Gioia Tauro, Milazzo, Palermo), Southern Adriatic (Manfredonia) and Ionian (Taranto, Augusta) Seas. Each buoy will be equipped with real time and pseudo (about 15 minutes) real time data acquisition and transmission system, based on GSM data transmission, SMS and e_mail procedures. Physical and Physico-Chemical parameters (T, C, DO, Turbidity, Fluorescence), Nutrients (NH4, NO2, NO3, PO4) will be monitored on water samples pumped from various depths. These measurements will be integrated with meteorological and ADCP observations and with laboratory bacteriological analysis of water samples collected using an ex- pressly designed water sampler. The use of such a device will support the develop- ment of new bacteriological methods rapid enough to be applied in the monitoring of seawater pollution. In particular, microscopical detection by immunofluorescence which has previously proved to be a useful technique for detection and quantification of the microorganism Escherichia coli, will be applied as the choice method for the determination of the most usual indicator of faecal contamination. Collected data will be included in a specifically-developed database with a client/server internet-like ar- chitecture. The data and metadata format complies with those stated at international level for marine and oceanographic data exchange. Software procedures will allow data entry and retrieval via browser. A GIS application will enable to merge

  15. Assessing habitat risk from human activities to inform coastal and marine spatial planning: a demonstration in Belize

    NASA Astrophysics Data System (ADS)

    Arkema, Katie K.; Verutes, Gregory; Bernhardt, Joanna R.; Clarke, Chantalle; Rosado, Samir; Canto, Maritza; Wood, Spencer A.; Ruckelshaus, Mary; Rosenthal, Amy; McField, Melanie; de Zegher, Joann

    2014-11-01

    Integrated coastal and ocean management requires transparent and accessible approaches for understanding the influence of human activities on marine environments. Here we introduce a model for assessing the combined risk to habitats from multiple ocean uses. We apply the model to coral reefs, mangrove forests and seagrass beds in Belize to inform the design of the country’s first Integrated Coastal Zone Management (ICZM) Plan. Based on extensive stakeholder engagement, review of existing legislation and data collected from diverse sources, we map the current distribution of coastal and ocean activities and develop three scenarios for zoning these activities in the future. We then estimate ecosystem risk under the current and three future scenarios. Current levels of risk vary spatially among the nine coastal planning regions in Belize. Empirical tests of the model are strong—three-quarters of the measured data for coral reef health lie within the 95% confidence interval of interpolated model data and 79% of the predicted mangrove occurrences are associated with observed responses. The future scenario that harmonizes conservation and development goals results in a 20% reduction in the area of high-risk habitat compared to the current scenario, while increasing the extent of several ocean uses. Our results are a component of the ICZM Plan for Belize that will undergo review by the national legislature in 2015. This application of our model to marine spatial planning in Belize illustrates an approach that can be used broadly by coastal and ocean planners to assess risk to habitats under current and future management scenarios.

  16. Experimental Warming Decreases the Average Size and Nucleic Acid Content of Marine Bacterial Communities

    PubMed Central

    Huete-Stauffer, Tamara M.; Arandia-Gorostidi, Nestor; Alonso-Sáez, Laura; Morán, Xosé Anxelu G.

    2016-01-01

    Organism size reduction with increasing temperature has been suggested as a universal response to global warming. Since genome size is usually correlated to cell size, reduction of genome size in unicells could be a parallel outcome of warming at ecological and evolutionary time scales. In this study, the short-term response of cell size and nucleic acid content of coastal marine prokaryotic communities to temperature was studied over a full annual cycle at a NE Atlantic temperate site. We used flow cytometry and experimental warming incubations, spanning a 6°C range, to analyze the hypothesized reduction with temperature in the size of the widespread flow cytometric bacterial groups of high and low nucleic acid content (HNA and LNA bacteria, respectively). Our results showed decreases in size in response to experimental warming, which were more marked in 0.8 μm pre-filtered treatment rather than in the whole community treatment, thus excluding the role of protistan grazers in our findings. Interestingly, a significant effect of temperature on reducing the average nucleic acid content (NAC) of prokaryotic cells in the communities was also observed. Cell size and nucleic acid decrease with temperature were correlated, showing a common mean decrease of 0.4% per °C. The usually larger HNA bacteria consistently showed a greater reduction in cell and NAC compared with their LNA counterparts, especially during the spring phytoplankton bloom period associated to maximum bacterial growth rates in response to nutrient availability. Our results show that the already smallest planktonic microbes, yet with key roles in global biogeochemical cycling, are likely undergoing important structural shrinkage in response to rising temperatures. PMID:27242747

  17. Experimental Warming Decreases the Average Size and Nucleic Acid Content of Marine Bacterial Communities.

    PubMed

    Huete-Stauffer, Tamara M; Arandia-Gorostidi, Nestor; Alonso-Sáez, Laura; Morán, Xosé Anxelu G

    2016-01-01

    Organism size reduction with increasing temperature has been suggested as a universal response to global warming. Since genome size is usually correlated to cell size, reduction of genome size in unicells could be a parallel outcome of warming at ecological and evolutionary time scales. In this study, the short-term response of cell size and nucleic acid content of coastal marine prokaryotic communities to temperature was studied over a full annual cycle at a NE Atlantic temperate site. We used flow cytometry and experimental warming incubations, spanning a 6°C range, to analyze the hypothesized reduction with temperature in the size of the widespread flow cytometric bacterial groups of high and low nucleic acid content (HNA and LNA bacteria, respectively). Our results showed decreases in size in response to experimental warming, which were more marked in 0.8 μm pre-filtered treatment rather than in the whole community treatment, thus excluding the role of protistan grazers in our findings. Interestingly, a significant effect of temperature on reducing the average nucleic acid content (NAC) of prokaryotic cells in the communities was also observed. Cell size and nucleic acid decrease with temperature were correlated, showing a common mean decrease of 0.4% per °C. The usually larger HNA bacteria consistently showed a greater reduction in cell and NAC compared with their LNA counterparts, especially during the spring phytoplankton bloom period associated to maximum bacterial growth rates in response to nutrient availability. Our results show that the already smallest planktonic microbes, yet with key roles in global biogeochemical cycling, are likely undergoing important structural shrinkage in response to rising temperatures. PMID:27242747

  18. Experimental Warming Decreases the Average Size and Nucleic Acid Content of Marine Bacterial Communities.

    PubMed

    Huete-Stauffer, Tamara M; Arandia-Gorostidi, Nestor; Alonso-Sáez, Laura; Morán, Xosé Anxelu G

    2016-01-01

    Organism size reduction with increasing temperature has been suggested as a universal response to global warming. Since genome size is usually correlated to cell size, reduction of genome size in unicells could be a parallel outcome of warming at ecological and evolutionary time scales. In this study, the short-term response of cell size and nucleic acid content of coastal marine prokaryotic communities to temperature was studied over a full annual cycle at a NE Atlantic temperate site. We used flow cytometry and experimental warming incubations, spanning a 6°C range, to analyze the hypothesized reduction with temperature in the size of the widespread flow cytometric bacterial groups of high and low nucleic acid content (HNA and LNA bacteria, respectively). Our results showed decreases in size in response to experimental warming, which were more marked in 0.8 μm pre-filtered treatment rather than in the whole community treatment, thus excluding the role of protistan grazers in our findings. Interestingly, a significant effect of temperature on reducing the average nucleic acid content (NAC) of prokaryotic cells in the communities was also observed. Cell size and nucleic acid decrease with temperature were correlated, showing a common mean decrease of 0.4% per °C. The usually larger HNA bacteria consistently showed a greater reduction in cell and NAC compared with their LNA counterparts, especially during the spring phytoplankton bloom period associated to maximum bacterial growth rates in response to nutrient availability. Our results show that the already smallest planktonic microbes, yet with key roles in global biogeochemical cycling, are likely undergoing important structural shrinkage in response to rising temperatures.

  19. Quantifying the response of structural complexity and community composition to environmental change in marine communities.

    PubMed

    Ferrari, Renata; Bryson, Mitch; Bridge, Tom; Hustache, Julie; Williams, Stefan B; Byrne, Maria; Figueira, Will

    2016-05-01

    Habitat structural complexity is a key factor shaping marine communities. However, accurate methods for quantifying structural complexity underwater are currently lacking. Loss of structural complexity is linked to ecosystem declines in biodiversity and resilience. We developed new methods using underwater stereo-imagery spanning 4 years (2010-2013) to reconstruct 3D models of coral reef areas and quantified both structural complexity at two spatial resolutions (2.5 and 25 cm) and benthic community composition to characterize changes after an unprecedented thermal anomaly on the west coast of Australia in 2011. Structural complexity increased at both resolutions in quadrats (4 m(2)) that bleached, but not those that did not bleach. Changes in complexity were driven by species-specific responses to warming, highlighting the importance of identifying small-scale dynamics to disentangle ecological responses to disturbance. We demonstrate an effective, repeatable method for quantifying the relationship among community composition, structural complexity and ocean warming, improving predictions of the response of marine ecosystems to environmental change. PMID:26679689

  20. Decision-making in Coastal Management and a Collaborative Governance Framework

    EPA Science Inventory

    Over half of the US population lives in coastal watersheds, creating a regional pressure for coastal ecosystems to provide a broad spectrum of services while continuing to support healthy communities and economies. The National Ocean Policy, issued in 2010, and Coastal and Marin...

  1. Metabolism of a nitrogen-enriched coastal marine lagoon during the summertime

    USGS Publications Warehouse

    Howarth, Robert W.; Hayn, Melanie; Marino, Roxanne M.; Ganju, Neil; Foreman, Kenneth H.; McGlathery, Karen; Giblin, Anne E.; Berg, Peter; Walker, Jeffrey D.

    2014-01-01

    We measured metabolism rates in a shallow, nitrogen-enriched coastal marine ecosystem on Cape Cod (MA, USA) during seven summers using an open-water diel oxygen method. We compared two basins, one directly receiving most of the nitrogen (N) load (“Snug Harbor”) and another further removed from the N load and better flushed (“Outer Harbor”). Both dissolved oxygen and pH varied greatly over the day, increasing in daylight and decreasing at night. The more N-enriched basin frequently went hypoxic during the night, and the pH in both basins was low (compared to standard seawater) when the oxygen levels were low, due to elevated carbon dioxide. Day-to-day variation in gross primary production (GPP) was high and linked in part to variation in light. Whole-ecosystem respiration tended to track this short-term variation in GPP, suggesting that respiration by the primary producers often dominated whole-system respiration. GPP was higher in the more N-loaded Snug Harbor. Seagrasses covered over 60 % of the area of the better-flushed, Outer Harbor throughout our study and were the major contributors to GPP there. Seagrasses covered 20 % of the area in Snug Harbor for the first 5 years of our study, and their contribution to GPP was relatively small. The seagrasses in Snug Harbor died off completely in the 6th year, but GPP remained high then and in the subsequent year. Overall, rates of phytoplankton GPP were relatively low, suggesting that benthic micro- and macro-algae may be the dominant primary producers in Snug Harbor in most years. Net ecosystem production in both Snug Harbor and the Outer Harbor was variable from year to year, showing net heterotrophy in some years and net autotrophy in others, with a trend towards increasing autotrophy over the 7 years reported here.

  2. Meteo-marine parameters for highly variable environment in coastal regions from satellite radar images

    NASA Astrophysics Data System (ADS)

    Pleskachevsky, A. L.; Rosenthal, W.; Lehner, S.

    2016-09-01

    The German Bight of the North Sea is the area with highly variable sea state conditions, intensive ship traffic and with a high density of offshore installations, e.g. wind farms in use and under construction. Ship navigation and the docking on offshore constructions is impeded by significant wave heights HS > 1.3 m. For these reasons, improvements are required in recognition and forecasting of sea state HS in the range 0-3 m. Thus, this necessitates the development of new methods to determine the distribution of meteo-marine parameters from remote sensing data with an accuracy of decimetres for HS. The operationalization of these methods then allows the robust automatic processing in near real time (NRT) to support forecast agencies by providing validations for model results. A new empirical algorithm XWAVE_C (C = coastal) for estimation of significant wave height from X-band satellite-borne Synthetic Aperture Radar (SAR) data has been developed, adopted for coastal applications using TerraSAR-X (TS-X) and Tandem-X (TD-X) satellites in the German Bight and implemented into the Sea Sate Processor (SSP) for fully automatic processing for NRT services. The algorithm is based on the spectral analysis of subscenes and the model function uses integrated image spectra parameters as well as local wind information from the analyzed subscene. The algorithm is able to recognize and remove the influence of non-sea state produced signals in the Wadden Sea areas such as dry sandbars as well as nonlinear SAR image distortions produced by e.g. short wind waves and breaking waves. Also parameters of very short waves, which are not visible in SAR images and produce only unsystematic clutter, can be accurately estimated. The SSP includes XWAVE_C, a pre-filtering procedure for removing artefacts such as ships, seamarks, buoys, offshore constructions and slicks, and an additional procedure performing a check of results based on the statistics of the whole scene. The SSP allows an

  3. Osmoregulatory capacity and the ability to use marine food sources in two coastal songbirds (Cinclodes: Furnariidae) along a latitudinal gradient.

    PubMed

    Sabat, Pablo; Maldonado, Karin; Fariña, Jose Miguel; del Rio, Carlos Martínez

    2006-06-01

    Cinclodes nigrofumosus and C. oustaleti are two closely related songbirds that inhabit the northern Chilean coast during the austral fall and winter. This stretch spans a dramatic north to south latitudinal gradient in rainfall and temperature. Whereas C. nigrofumosus lives exclusively on coastal environments, C. oustaleti shifts seasonally from coastal environments to inland freshwater ones. We used the delta13C of these two species' tissues to investigate whether the reliance on marine versus terrestrial sources varied from the hyper-arid north to the wet south. We also investigated latitudinal variation in the renal traits that mediate how these birds cope with dehydration and a salty marine diet. Both species increased the incorporation of terrestrial carbon, as measured by delta13C, as terrestrial productivity increased southwards. However, C. nigrofumosus had consistently more positive (i.e. more marine) and less variable delta13C values than C. oustaleti. The osmoregulatory traits of both species varied with latitude as well. Urine osmolality decreased from extremely high values in the north to moderate values in the south, while C. nigrofumosus produced more concentrated urine than C. oustaleti. In both species, the proportion of kidney devoted to medullary tissue decreased from north to south, and kidney size increased significantly with latitude. Cinclodes nigrofumosus had larger kidneys with larger proportions of medullary tissue than C. oustaleti. C. nigrofumosus and C. oustaleti are terrestrial organisms subsidized by a rich marine environment where it is adjacent to an unproductive terrestrial. Variation in the reliance on marine food sources seems to be accompanied by adjustments in the osmoregulatory mechanisms used by these birds to cope with salt and dehydration. PMID:16496181

  4. The role of pre-existing disturbances in the effect of marine reserves on coastal ecosystems: a modelling approach.

    PubMed

    Savina, Marie; Condie, Scott A; Fulton, Elizabeth A

    2013-01-01

    We have used an end-to-end ecosystem model to explore responses over 30 years to coastal no-take reserves covering up to 6% of the fifty thousand square kilometres of continental shelf and slope off the coast of New South Wales (Australia). The model is based on the Atlantis framework, which includes a deterministic, spatially resolved three-dimensional biophysical model that tracks nutrient flows through key biological groups, as well as extraction by a range of fisheries. The model results support previous empirical studies in finding clear benefits of reserves to top predators such as sharks and rays throughout the region, while also showing how many of their major prey groups (including commercial species) experienced significant declines. It was found that the net impact of marine reserves was dependent on the pre-existing levels of disturbance (i.e. fishing pressure), and to a lesser extent on the size of the marine reserves. The high fishing scenario resulted in a strongly perturbed system, where the introduction of marine reserves had clear and mostly direct effects on biomass and functional biodiversity. However, under the lower fishing pressure scenario, the introduction of marine reserves caused both direct positive effects, mainly on shark groups, and indirect negative effects through trophic cascades. Our study illustrates the need to carefully align the design and implementation of marine reserves with policy and management objectives. Trade-offs may exist not only between fisheries and conservation objectives, but also among conservation objectives. PMID:23593432

  5. Late Cenozoic marine deposition in the United States Atlantic Coastal Plain related to tectonism and global climate

    USGS Publications Warehouse

    Blackwelder, B. W.

    1981-01-01

    Major hiatuses in upper Cenozoic marine deposits in the United States Atlantic Coastal Plain are recognized on the basis of molluscan faunal changes at erosional unconformities. These hiatuses generally coincided with periods of global cooling and ice sheet formation. Such hiatuses provide information to supplement global climatic data. Major hiatuses are recognized within the early Miocene (23-20 m.y. ago), at the end of the middle Miocene (??? 11-10 m.y. ago), at the end of the late Miocene (???6.5-5 m.y. ago), at the end of the early Pliocene (???4.0-2.5 m.y. ago), at the end of the late Pliocene (???1.9 or 1.8 m.y. ago), within the Pleistocene (???1.1-0.5 m.y. ago) and several times within the last 0.4 m.y. Estimates of the amount of water contained in ice sheets at different times in the Pliocene and Pleistocene facilitate calculation of probable minimum sea levels on the Coastal Plain during different high stands of the sea. The altitudes of dated shoreline deposits in the Atlantic Coastal Plain show that the amount of uplift in the Cape Fear area has averaged at least 1.3 cm per 1000 years since the beginning of Pliocene time. The Coastal Plain of Georgia has apparently experienced relatively little vertical deformation during this same time. ?? 1981.

  6. Effects of a surfacing effluent plume on a coastal phytoplankton community

    NASA Astrophysics Data System (ADS)

    Reifel, Kristen M.; Corcoran, Alina A.; Cash, Curtis; Shipe, Rebecca; Jones, Burton H.

    2013-06-01

    Urban runoff and effluent discharge from heavily populated coastal areas can negatively impact water quality, beneficial uses, and coastal ecosystems. The planned release of treated wastewater (i.e. effluent) from the City of Los Angeles Hyperion Wastewater Treatment Plant, located in Playa del Rey, California, provided an opportunity to study the effects of an effluent discharge plume from its initial release until it could no longer be detected in the coastal ocean. Non-metric multi-dimensional scaling analysis of phytoplankton community structure revealed distinct community groups based on salinity, temperature, and CDOM concentration. Three dinoflagellates (Lingulodinium polyedrum, Cochlodinium sp., Akashiwo sanguinea) were dominant (together >50% abundance) prior to the diversion. Cochlodinium sp. became dominant (65-90% abundance) within newly surfaced wastewater, and A. sanguinea became dominant or co-dominant as the effluent plume aged and mixed with ambient coastal water. Localized blooms of Cochlodinium sp. and A. sanguinea (chlorophyll a up to 100 mg m-3 and densities between 100 and 2000 cells mL-1) occurred 4-7 days after the diversion within the effluent plume. Although both Cochlodinium sp. and A. sanguinea have been occasionally reported from California waters, blooms of these species have only recently been observed along the California coast. Our work supports the hypothesis that effluent and urban runoff discharge can stimulate certain dinoflagellate blooms. All three dinoflagellates have similar ecophysiological characteristics; however, small differences in morphology, nutrient preferences, and environmental requirements may explain the shift in dinoflagellate composition.

  7. A survey of fish viruses isolated from wild marine fishes from the coastal waters of southern Korea.

    PubMed

    Kim, Wi-Sik; Choi, Shin-Young; Kim, Do-Hyung; Oh, Myung-Joo

    2013-11-01

    A survey was conducted to investigate viral infection in 253 wild marine fishes harvested in the southern coastal area of Korea from 2010 to 2012. The fish that were captured by local anglers were randomly bought and sampled for virus examination. The samples were tested for presence of virus by virus isolation with FHM, FSP, and BF-2 cells and molecular methods (polymerase chain reaction and sequencing). Of the 253 fish sampled, 9 fish were infected with virus. Aquabirnaviruses (ABVs), Viral hemorrhagic septicemia virus (VHSV), and Red seabream iridovirus (RSIV) were detected in 7, 1, and 1 fish, respectively. Molecular phylogenies demonstrated the detected viruses (ABV, VHSV, and RSIV) were more closely related to viruses reported of the same type from Korea and Japan than from other countries, suggesting these viruses may be indigenous to Korean and Japanese coastal waters.

  8. Effects of organic pollution and physical stress on benthic macroinvertebrate communities from two intermittently closed and open coastal lagoons (ICOLLs)

    NASA Astrophysics Data System (ADS)

    Coelho, Susana; Pérez-Ruzafa, Angel; Gamito, Sofia

    2015-12-01

    Benthic macroinvertebrate communities and environmental conditions were studied in two intermittently closed and open coastal lakes and lagoons (ICOLLs), located in southern Algarve (Foz do Almargem e Salgados), with the purpose of evaluating the effects of organic pollution, originated mainly from wastewater discharges, and the physical stress caused by the irregular opening of the lagoons. Most of the year, lagoons were isolated from the sea, receiving the freshwater inputs from small rivers and in Salgados, also from the effluents of a wastewater plant. According to environmental and biotic conditions, Foz do Almargem presented a greater marine influence and a lower trophic state (mesotrophic) than Salgados (hypereutrophic). Benthic macroinvertebrate communities in the lagoons were distinct, just as their relations with environmental parameters. Mollusca were the most abundant macroinvertebrates in Foz do Almargem, while Insecta, Oligochaeta and Crustacea were more relevant in Salgados. Corophium multisetosum occurred exclusively in Salgados stations and, just as Chironomus sp., other Insecta and Oligochaeta, densities were positively related to total phosphorus, clay content and chlorophyll a concentration in the sediment, chlorophyll a concentration in water and with total dissolved inorganic nitrogen. Abra segmentum, Cerastoderma glaucum, Peringia ulvae and Ecrobia ventrosa occurred only in Foz do Almargem, with lower values of the above mentioned parameters. Both lagoons were dominated by deposit feeders and taxa tolerant to environmental stress, although in Salgados there was a greater occurrence of opportunistic taxa associated to pronounced unbalanced situations, due to excess organic matter enrichment.

  9. Threats posed by artisanal fisheries to the reproduction of coastal fish species in a Mediterranean marine protected area

    NASA Astrophysics Data System (ADS)

    Lloret, J.; Muñoz, M.; Casadevall, M.

    2012-11-01

    Artisanal fisheries are frequently considered as a sustainable activity compatible with the conservation objectives of marine protected areas (MPAs). Few studies have examined the impacts of these fisheries on the reproductive potential of exploited fish species within the marine reserves. This study evaluated the potential impact of artisanal fishing on the reproduction of coastal fish species in a Mediterranean MPA through onboard sampling from January 2008 to December 2010. Eleven sex-changing fish species constituted an important part of the catch (20% overall and up to 60% of the total gill net catch) and, in five of them, most individuals were of one sex. Artisanal fishing can negatively affect the sustainability of those coastal fishes showing sex reversal, particularly the protogynous ones such as Diplodus cervinus and Epinephelus marginatus, as well as the species with complex mating systems (e.g. some sparids, labrids and scorpaenids). In all species the average size for the individuals captured was above the minimum landing size (where this exists), but in four species (Conger conger, Diplodus puntazzo, Sphyraena spp. and Sparus aurata) it was below the size of first maturity (L50). Results show that sex and size selection by artisanal fishing not only can have an impact on the reproduction of coastal fish species but may also be exacerbating rather than reducing the impact of fishing on coastal resources. Thus, new management actions need to be urgently implemented in the MPAs where artisanal fisheries are allowed to operate in order to protect the reproductive potential of these species, particularly those showing a complicated reproductive strategy.

  10. Marine Communities on Oil Platforms in Gabon, West Africa: High Biodiversity Oases in a Low Biodiversity Environment

    PubMed Central

    Friedlander, Alan M.; Ballesteros, Enric; Fay, Michael; Sala, Enric

    2014-01-01

    The marine biodiversity of Gabon, West Africa has not been well studied and is largely unknown. Our examination of marine communities associated with oil platforms in Gabon is the first scientific investigation of these structures and highlights the unique ecosystems associated with them. A number of species previously unknown to Gabonese waters were recorded during our surveys on these platforms. Clear distinctions in benthic communities were observed between older, larger platforms in the north and newer platforms to the south or closer to shore. The former were dominated by a solitary cup coral, Tubastraea sp., whereas the latter were dominated by the barnacle Megabalanus tintinnabulum, but with more diverse benthic assemblages compared to the northerly platforms. Previous work documented the presence of limited zooxanthellated scleractinian corals on natural rocky substrate in Gabon but none were recorded on platforms. Total estimated fish biomass on these platforms exceeded one ton at some locations and was dominated by barracuda (Sphyraena spp.), jacks (Carangids), and rainbow runner (Elagatis bipinnulata). Thirty-four percent of fish species observed on these platforms are new records for Gabon and 6% are new to tropical West Africa. Fish assemblages closely associated with platforms had distinct amphi-Atlantic affinities and platforms likely extend the distribution of these species into coastal West Africa. At least one potential invasive species, the snowflake coral (Carijoa riisei), was observed on the platforms. Oil platforms may act as stepping stones, increasing regional biodiversity and production but they may also be vectors for invasive species. Gabon is a world leader in terrestrial conservation with a network of protected areas covering >10% of the country. Oil exploration and biodiversity conservation currently co-exist in terrestrial and freshwater ecosystems in Gabon. Efforts to increase marine protection in Gabon may benefit by including oil

  11. Marine communities on oil platforms in Gabon, West Africa: high biodiversity oases in a low biodiversity environment.

    PubMed

    Friedlander, Alan M; Ballesteros, Enric; Fay, Michael; Sala, Enric

    2014-01-01

    The marine biodiversity of Gabon, West Africa has not been well studied and is largely unknown. Our examination of marine communities associated with oil platforms in Gabon is the first scientific investigation of these structures and highlights the unique ecosystems associated with them. A number of species previously unknown to Gabonese waters were recorded during our surveys on these platforms. Clear distinctions in benthic communities were observed between older, larger platforms in the north and newer platforms to the south or closer to shore. The former were dominated by a solitary cup coral, Tubastraea sp., whereas the latter were dominated by the barnacle Megabalanus tintinnabulum, but with more diverse benthic assemblages compared to the northerly platforms. Previous work documented the presence of limited zooxanthellated scleractinian corals on natural rocky substrate in Gabon but none were recorded on platforms. Total estimated fish biomass on these platforms exceeded one ton at some locations and was dominated by barracuda (Sphyraena spp.), jacks (Carangids), and rainbow runner (Elagatis bipinnulata). Thirty-four percent of fish species observed on these platforms are new records for Gabon and 6% are new to tropical West Africa. Fish assemblages closely associated with platforms had distinct amphi-Atlantic affinities and platforms likely extend the distribution of these species into coastal West Africa. At least one potential invasive species, the snowflake coral (Carijoa riisei), was observed on the platforms. Oil platforms may act as stepping stones, increasing regional biodiversity and production but they may also be vectors for invasive species. Gabon is a world leader in terrestrial conservation with a network of protected areas covering >10% of the country. Oil exploration and biodiversity conservation currently co-exist in terrestrial and freshwater ecosystems in Gabon. Efforts to increase marine protection in Gabon may benefit by including oil

  12. Marine communities on oil platforms in Gabon, West Africa: high biodiversity oases in a low biodiversity environment.

    PubMed

    Friedlander, Alan M; Ballesteros, Enric; Fay, Michael; Sala, Enric

    2014-01-01

    The marine biodiversity of Gabon, West Africa has not been well studied and is largely unknown. Our examination of marine communities associated with oil platforms in Gabon is the first scientific investigation of these structures and highlights the unique ecosystems associated with them. A number of species previously unknown to Gabonese waters were recorded during our surveys on these platforms. Clear distinctions in benthic communities were observed between older, larger platforms in the north and newer platforms to the south or closer to shore. The former were dominated by a solitary cup coral, Tubastraea sp., whereas the latter were dominated by the barnacle Megabalanus tintinnabulum, but with more diverse benthic assemblages compared to the northerly platforms. Previous work documented the presence of limited zooxanthellated scleractinian corals on natural rocky substrate in Gabon but none were recorded on platforms. Total estimated fish biomass on these platforms exceeded one ton at some locations and was dominated by barracuda (Sphyraena spp.), jacks (Carangids), and rainbow runner (Elagatis bipinnulata). Thirty-four percent of fish species observed on these platforms are new records for Gabon and 6% are new to tropical West Africa. Fish assemblages closely associated with platforms had distinct amphi-Atlantic affinities and platforms likely extend the distribution of these species into coastal West Africa. At least one potential invasive species, the snowflake coral (Carijoa riisei), was observed on the platforms. Oil platforms may act as stepping stones, increasing regional biodiversity and production but they may also be vectors for invasive species. Gabon is a world leader in terrestrial conservation with a network of protected areas covering >10% of the country. Oil exploration and biodiversity conservation currently co-exist in terrestrial and freshwater ecosystems in Gabon. Efforts to increase marine protection in Gabon may benefit by including oil

  13. Modelling marine community responses to climate-driven species redistribution to guide monitoring and adaptive ecosystem-based management.

    PubMed

    Marzloff, Martin Pierre; Melbourne-Thomas, Jessica; Hamon, Katell G; Hoshino, Eriko; Jennings, Sarah; van Putten, Ingrid E; Pecl, Gretta T

    2016-07-01

    As a consequence of global climate-driven changes, marine ecosystems are experiencing polewards redistributions of species - or range shifts - across taxa and throughout latitudes worldwide. Research on these range shifts largely focuses on understanding and predicting changes in the distribution of individual species. The ecological effects of marine range shifts on ecosystem structure and functioning, as well as human coastal communities, can be large, yet remain difficult to anticipate and manage. Here, we use qualitative modelling of system feedback to understand the cumulative impacts of multiple species shifts in south-eastern Australia, a global hotspot for ocean warming. We identify range-shifting species that can induce trophic cascades and affect ecosystem dynamics and productivity, and evaluate the potential effectiveness of alternative management interventions to mitigate these impacts. Our results suggest that the negative ecological impacts of multiple simultaneous range shifts generally add up. Thus, implementing whole-of-ecosystem management strategies and regular monitoring of range-shifting species of ecological concern are necessary to effectively intervene against undesirable consequences of marine range shifts at the regional scale. Our study illustrates how modelling system feedback with only limited qualitative information about ecosystem structure and range-shifting species can predict ecological consequences of multiple co-occurring range shifts, guide ecosystem-based adaptation to climate change and help prioritise future research and monitoring. PMID:26990671

  14. Modelling marine community responses to climate-driven species redistribution to guide monitoring and adaptive ecosystem-based management.

    PubMed

    Marzloff, Martin Pierre; Melbourne-Thomas, Jessica; Hamon, Katell G; Hoshino, Eriko; Jennings, Sarah; van Putten, Ingrid E; Pecl, Gretta T

    2016-07-01

    As a consequence of global climate-driven changes, marine ecosystems are experiencing polewards redistributions of species - or range shifts - across taxa and throughout latitudes worldwide. Research on these range shifts largely focuses on understanding and predicting changes in the distribution of individual species. The ecological effects of marine range shifts on ecosystem structure and functioning, as well as human coastal communities, can be large, yet remain difficult to anticipate and manage. Here, we use qualitative modelling of system feedback to understand the cumulative impacts of multiple species shifts in south-eastern Australia, a global hotspot for ocean warming. We identify range-shifting species that can induce trophic cascades and affect ecosystem dynamics and productivity, and evaluate the potential effectiveness of alternative management interventions to mitigate these impacts. Our results suggest that the negative ecological impacts of multiple simultaneous range shifts generally add up. Thus, implementing whole-of-ecosystem management strategies and regular monitoring of range-shifting species of ecological concern are necessary to effectively intervene against undesirable consequences of marine range shifts at the regional scale. Our study illustrates how modelling system feedback with only limited qualitative information about ecosystem structure and range-shifting species can predict ecological consequences of multiple co-occurring range shifts, guide ecosystem-based adaptation to climate change and help prioritise future research and monitoring.

  15. Assessment of the environmental status of the coastal and marine aquatic environment in Europe: A plea for adaptive management

    NASA Astrophysics Data System (ADS)

    Laane, R. W. P. M.; Slijkerman, D.; Vethaak, A. D.; Schobben, J. H. M.

    2012-01-01

    Policymakers and managers have a very different philosophy and approach to achieving healthy coastal and marine ecosystems than scientists. In this paper we discuss the evolution of the assessment of the chemical status in the aquatic environment and the growing rift between the political intention (precautionary principle) and scientific developments (adaptive and evidence-based management) in the context of the pitfalls and practicalities confronting the current Marine Strategy Framework Directive (MSFD). The conclusion is that policymakers and water managers should move with the times and take on board new techniques that scientists are using to assess chemical status and apply new scientific developments in assessment studies of the chemical status. These new techniques, such as bioassays, are cheaper than the classic approach of checking whether concentrations of certain individual priority compounds comply with permissible thresholds. Additionally, they give more insight into the real impacts of chemical compounds.

  16. Distribution and bioaccumulation of heavy metals in marine organisms in east and west Guangdong coastal regions, South China.

    PubMed

    Zhang, Ling; Shi, Zhen; Jiang, Zhijian; Zhang, Jingping; Wang, Fei; Huang, Xiaoping

    2015-12-30

    Heavy metal (Cu, Pb, Zn, Cr, Cd, As) concentrations, distribution and bioaccumulation were studied in marine organisms in Guangdong coastal regions. Heavy metal concentrations and distribution in organisms showed characteristics according to areas and species. Heavy metal concentrations in most organisms were higher in west than in east, tightly related to the local industry structure and the disequilibrium of metal discharge. Generally, high heavy metal concentrations were detected in molluscs and low concentrations were detected in fish. Bioaccumulation factor was used to assess the accumulation level of marine organisms to heavy metals, of which Cd, Cu and As were the most accumulated elements. Accumulation abilities to heavy metals varied among organism species, such as Distorsio reticulate accumulating Cu, Zn, Cd, As, Loligo beka Sasaki accumulating Pb, Cu, Cr, and Turritella bacillum Kiener accumulating Zn, Cd, As. By comparison, Johnius belengeri, Argyrosomus argentatus, Cynoglossus sinicus Wu had relatively low accumulation abilities.

  17. Dom Export from Coastal Temperate Bog Forest Watersheds to Marine Ecosystems: Improving Understanding of Watershed Processes and Terrestrial-Marine Linkages on the Central Coast of British Columbia

    NASA Astrophysics Data System (ADS)

    Oliver, A. A.; Giesbrecht, I.; Tank, S. E.; Hunt, B. P.; Lertzman, K. P.

    2014-12-01

    The coastal temperate bog forests of British Columbia, Canada, export high amounts of dissolved organic matter (DOM) relative to the global average. Little is known about the factors influencing the quantity and quality of DOM exported from these forests or the role of this terrestrially-derived DOM in near-shore marine ecosystems. The objectives of this study are to better understand patterns and controls of DOM being exported from bog forest watersheds and its potential role in near-shore marine ecosystems. In 2013, the Kwakshua Watershed Ecosystems Study at Hakai Beach Institute (Calvert Island, BC) began year-round routine collection and analysis of DOM, nutrients, and environmental variables (e.g. conductivity, pH, temperature, dissolved oxygen) of freshwater grab samples from the outlets of seven watersheds draining directly to the ocean, as well as near-shore marine samples adjacent to freshwater outflows. Dissolved organic carbon (DOC) varied across watersheds (mean= 11.45 mg L-1, sd± 4.22) and fluctuated synchronously with seasons and storm events. In general, higher DOC was associated with lower specific UV absorbance (SUVA254; mean= 4.59 L mg-1 m-1, sd± 0.55). The relationship between DOC and SUVA254 differed between watersheds, suggesting exports in DOM are regulated by individual watershed attributes (e.g. landscape classification, flow paths) as well as precipitation. We are using LiDAR and other remote sensing data to examine watershed controls on DOC export. At near-shore marine sites, coupled CTD (Conductivity Temperature Depth) and optical measures (e.g. spectral slopes, slope ratios (SR), EEMs), showed a clear freshwater DOM signature within the system following rainfall events. Ongoing work will explore the relationship between bog forest watershed attributes and DOM flux and composition, with implications for further studies on biogeochemical cycling, carbon budgets, marine food webs, and climate change.

  18. Characterization of arbuscular mycorrhizal fungal communities with respect to zonal vegetation in a coastal dune ecosystem.

    PubMed

    Kawahara, Ai; Ezawa, Tatsuhiro

    2013-10-01

    Coastal dune vegetation distributes zonally along the environmental gradients of, e.g., soil disturbance. In the preset study, arbuscular mycorrhizal fungal communities in a coastal dune ecosystem were characterized with respect to tolerance to soil disturbance. Two grass species, Elymus mollis and Miscanthus sinensis, are distributed zonally in the seaward and landward slopes, respectively, in the primary dunes in Ishikari, Japan. The seaward slope is severely disturbed by wind, while the landward slope is stabilized by the thick root system of M. sinensis. The roots and rhizosphere soils of the two grasses were collected from the slopes. The soils were sieved to destruct the fungal hyphal networks, and soil trap culture was conducted to assess tolerance of the communities to disturbance, with parallel analysis of the field communities using a molecular ecological tool. In the landward communities, large shifts in the composition and increases in diversity were observed in the trap culture compared with the field, but in the seaward communities, the impact of trap culture was minimal. The landward field community was significantly nested within the landward trap culture community, implying that most members in the field community did not disappear in the trap culture. No nestedness was observed in the seaward communities. These observations suggest that disturbance-tolerant fungi have been preferentially selected in the seaward slope due to severe disturbance in the habitat. Whereas a limited number of fungi, which are not necessarily disturbance-sensitive, dominate in the stable landward slope, but high-potential diversity has been maintained in the habitat.

  19. Response of bacterial community structure and function to experimental rainwater additions in a coastal eutrophic embayment

    NASA Astrophysics Data System (ADS)

    Teira, Eva; Hernando-Morales, Víctor; Martínez-García, Sandra; Figueiras, Francisco G.; Arbones, Belén; Álvarez-Salgado, Xosé Antón

    2013-03-01

    Although recognized as a potentially important source of both inorganic and organic nutrients, the impact of rainwater on microbial populations from marine planktonic systems has been poorly assessed. The effect of rainwater additions on bacterioplankton metabolism and community composition was evaluated in microcosm experiments enclosing natural marine plankton populations from the Ría de Vigo (NW Spain). The experiments were conducted during three different seasons (spring, autumn and winter) using rainwater collected at three different locations: marine, urban and rural sites. Bacterial abundance and production significantly increased up to 1.3 and 1.8-fold, respectively, after urban rainwater additions in spring, when ambient nutrient concentration was very low. Overall, the increments in bacterial production were higher than those in bacterial respiration, which implies that a higher proportion of carbon consumed by bacteria would be available to higher trophic levels. The response of the different bacterial groups to distinct rainwater types differed between seasons. The most responsive bacterial groups were Betaproteobacteria which significantly increased their abundance after urban (in spring and winter) and marine (in spring) rainwater additions, and Bacteroidetes which positively responded to all rainwater treatments in spring and to urban rainwater in autumn. Gammaproteobacteria and Roseobacter responded only to urban (in spring) and marine (in winter) rainwater treatment, respectively. The responses to rainwater additions were moderate and transient, and the resulting bacterial community structure was not importantly altered.

  20. Aliidiomarina iranensis sp. nov., a haloalkaliphilic bacterium from a coastal-marine wetland.

    PubMed

    Ali Amoozegar, Mohammad; Shahinpei, Azadeh; Abolhassan Shahzadeh Fazeli, Seyed; Schumann, Peter; Spröer, Cathrin; Ventosa, Antonio

    2016-05-01

    A novel Gram-stain-negative, straight rod-shaped, non-pigmented, slightly halophilic and alkaliphilic bacterium, designated strain GBPy7T, was isolated from a sample of the coastal-marine wetland Gomishan in Iran. Cells of strain GBPy7T were motile. Growth occurred on media with 1-15 % (w/v) NaCl (optimum 3 %), at pH 7-10 (optimum pH 8.5) and at 4-45 °C (optimum 37 °C). Phylogenetic analysis based on 16S rRNA gene sequence comparison indicated that strain GBPy7T belonged to the family Idiomarinaceae. Its closest relatives were Aliidiomarina shirensis AIST (98.1 % 16S rRNA gene sequence similarity) and other Aliidiomarina species (95.9-94.2 %), together with Idiomarina seosinensis CL-SP19T (94.3 %) and Idiomarina fontislapidosi F23T (94.3 %). The major cellular fatty acids of the isolate were iso-C15 : 0, iso-C17 : 0, iso-C17 : 1ω9c and C18 : 1ω7c and its polar lipid profile comprised phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, one unknown phospholipid and one unknown aminophospholipid. Cells of strain GBPy7T contained ubiquinone Q-8. The G+C content of the genomic DNA of this strain was 51.6 mol%. The level of DNA-DNA relatedness between strain GBPy7T and A. shirensis IBRC-M 10414T was 21 %. The physiological, biochemical, genotypic and phylogenetic differences between strain GBPy7T and other previously described taxa indicate that the strain represents a novel species of the genus Aliidiomarina within the family Idiomarinaceae, for which the name Aliidiomarina iranensis sp. nov. is proposed. The type strain is GBPy7T ( = IBRC-M 10763T = CECT 8339T). PMID:26928783

  1. Coastal wetland response to sea level rise in a marine and fluvial estuarine system

    NASA Astrophysics Data System (ADS)

    Alizad, K.; Hagen, S. C.; Morris, J. T.; Bilskie, M. V.; Passeri, D. L.; Medeiros, S. C.

    2014-12-01

    Coastal wetlands are at the risk of losing their productivity under increasing rates of sea level rise (SLR). Studies show that under extreme enough stressors, salt marshes will not have time to establish an equilibrium and may migrate landward (Donnelly and Bertness 2001; Warren and Niering 1993) or become open water. In order to investigate salt marsh productivity under SLR scenarios, an integrated hydrodynamic-marsh model was incorporated to dynamically couple physics and biology. The hydrodynamic model calculates mean high water (MHW) and mean low water (MLW) within the river and tidal creeks by analysis of simulated tidal constituents. The response of MHW and MLW is nonlinear due to local changes in the salt marsh platform elevation and biomass productivity. Spatially-varying MHW and MLW are utilized in a biologic model that is a two-dimensional application of the Marsh Equilibrium Model (Morris et al. 2002) to capture the effects of the hydrodynamics on biomass productivity and accretion. Including accurate marsh table elevations into the model is crucial to obtain accurate biomass productivity results. A lidar-derived Digital Elevation Model (DEM) is corrected by incorporating Real Time Kinematic (RTK) surveying elevation data. Additionally, salt marshes continually adapt themselves to reach an equilibrium, in which there are ideal ranges of relative SLR and depth of inundation to increase biomass productivity (Morris et al. 2002). The inputs of the model are updated using the biomass productivity results at each coupling time step to capture the interaction between the marsh and hydrodynamic models. The hydro-marsh model is used to assess the effects of four projections of SLR (Parris et al., 2012) on salt marsh productivity for the year 2100 for the marine dominated Grand Bay, MS estuary and the fluvial dominated Apalachicola, FL estuary. The results show higher productivity under a low SLR scenario and less productivity under the intermediate low SLR

  2. Aliidiomarina iranensis sp. nov., a haloalkaliphilic bacterium from a coastal-marine wetland.

    PubMed

    Ali Amoozegar, Mohammad; Shahinpei, Azadeh; Abolhassan Shahzadeh Fazeli, Seyed; Schumann, Peter; Spröer, Cathrin; Ventosa, Antonio

    2016-05-01

    A novel Gram-stain-negative, straight rod-shaped, non-pigmented, slightly halophilic and alkaliphilic bacterium, designated strain GBPy7T, was isolated from a sample of the coastal-marine wetland Gomishan in Iran. Cells of strain GBPy7T were motile. Growth occurred on media with 1-15 % (w/v) NaCl (optimum 3 %), at pH 7-10 (optimum pH 8.5) and at 4-45 °C (optimum 37 °C). Phylogenetic analysis based on 16S rRNA gene sequence comparison indicated that strain GBPy7T belonged to the family Idiomarinaceae. Its closest relatives were Aliidiomarina shirensis AIST (98.1 % 16S rRNA gene sequence similarity) and other Aliidiomarina species (95.9-94.2 %), together with Idiomarina seosinensis CL-SP19T (94.3 %) and Idiomarina fontislapidosi F23T (94.3 %). The major cellular fatty acids of the isolate were iso-C15 : 0, iso-C17 : 0, iso-C17 : 1ω9c and C18 : 1ω7c and its polar lipid profile comprised phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, one unknown phospholipid and one unknown aminophospholipid. Cells of strain GBPy7T contained ubiquinone Q-8. The G+C content of the genomic DNA of this strain was 51.6 mol%. The level of DNA-DNA relatedness between strain GBPy7T and A. shirensis IBRC-M 10414T was 21 %. The physiological, biochemical, genotypic and phylogenetic differences between strain GBPy7T and other previously described taxa indicate that the strain represents a novel species of the genus Aliidiomarina within the family Idiomarinaceae, for which the name Aliidiomarina iranensis sp. nov. is proposed. The type strain is GBPy7T ( = IBRC-M 10763T = CECT 8339T).

  3. Selective uptake of prokaryotic picoplankton by a marine sponge ( Callyspongia sp.) within an oligotrophic coastal system

    NASA Astrophysics Data System (ADS)

    Hanson, Christine E.; McLaughlin, M. James; Hyndes, Glenn A.; Strzelecki, Joanna

    2009-09-01

    Marine sponges are key players in the transfer of carbon from the pelagic microbial food web into the benthos. Selective uptake of prokaryotic picoplankton (<2 μm) by a demosponge ( Callyspongia sp.), and carbon flux through this process, were examined for the first time in the oligotrophic coastal waters of southwestern Australia, where sponge abundance and biodiversity ranks among the highest in the world. Water sampling and flow rate measurements were conducted over five sampling occasions following the InEx method of Yahel et al. (2005), with heterotrophic bacteria and autotrophic Synechococcus cyanobacteria identified and enumerated by flow cytometry. Callyspongia sp. demonstrated high filtration efficiencies, particularly for high DNA (HDNA) bacteria (up to 85.3% in summer 2008) and Synechococcus (up to 91.1% in autumn 2007), however efficiency varied non-uniformly with time and food type ( p < 0.01). Overall filtration efficiency for Synechococcus (86.6 ± 6.3%; mean ± s.d.) was always significantly higher ( p < 0.05) than for low DNA (LDNA) bacteria (40 ± 17.2%), except during winter 2007 ( p = 0.14) when ambient Synechococcus concentrations were lowest. When compared to ambient abundances of the different food types, Callyspongia sp. exhibited consistently negative selectivity for LDNA bacteria and positive selectivity for Synechococcus, while HDNA bacteria was generally a neutral or positive selection. The total carbon removal rate (sum of all prokaryotic picoplankton cells), calculated on a per unit area basis, varied significantly with time ( p < 0.01), with lowest rates recorded during the winter (0.5 ± 0.4-0.6 ± 0.8 mg C m -2 d -1) and highest values recorded in summer (3.5 ± 1.9 mg C m -2 d -1). These flux estimates quantify the role of a demosponge species in the ultimate fate of prokaryotic picoplankton within the nearshore food webs of southwestern Australia, and support the conclusion that sponges actively select food particles that

  4. Reactive transport modeling of the impact of ocean acidification on global carbon fluxes in coastal marine sediments

    NASA Astrophysics Data System (ADS)

    Krumins, Valdis; van Cappellen, Philippe; Regnier, Pierre

    2010-05-01

    Because of relatively high productivity of both calcifying and non-calcifying phytoplankton in coastal zones, coastal sediments can act as a significant carbon sink. Ocean acidification is likely to impact productivity of these groups differently, raising the question of the overall effect of ocean acidification on carbon burial in coastal sediments. We modeled the effect of varying depositional fluxes of particulate organic carbon (POC) and particulate inorganic carbon (PIC) on carbon cycling in coastal marine sediments using a one-dimensional reactive transport model. Transport processes include sediment burial, advection, diffusion, bioturbation and bioirrigation. The model incorporates the hydrolysis of macromolecular organic matter, the redox pathways of POC oxidation, re-oxidation reactions of the reduced compounds produced during POC decomposition, the acid-base chemical equilibria, and the dissolution of PIC (calcite, aragonite, and Mg-calcite) in the upper 50 cm of sediment. The following processes are also included: precipitation of iron sulfide and iron carbonate, sorption of Fe(II), ammonium and phosphate, sulfidization of organic matter, and pyritization. The global return fluxes of dissolved inorganic carbon (DIC) and alkalinity are estimated by modeling sediments at 25 m, 75 m, and 150 m depths, and multiplying by the global area of seafloor depths 0-50 m, 50-100 m, and 100-200 m, respectively. We determined the sensitivity of carbon and nutrient return fluxes to changes in pH, PIC and POC fluxes, as well as to poorly constrained Fe(III) deposition fluxes. Inorganic carbon return fluxes are influenced most by the particulate organic and inorganic carbon depositional fluxes; the seawater pH has a limited effect. Modeled sediment pH profiles and PIC dissolution are also sensitive to the iron deposition flux. The overreaching goal of the research is to forecast the global response of coastal sediment return fluxes as a result of anthropogenic ocean

  5. Complex community of nitrite-dependent anaerobic methane oxidation bacteria in coastal sediments of the Mai Po wetland by PCR amplification of both 16S rRNA and pmoA genes.

    PubMed

    Chen, Jing; Zhou, Zhichao; Gu, Ji-Dong

    2015-02-01

    In the present work, both 16S rRNA and pmoA gene-based PCR primers were employed successfully to study the diversity and distribution of n-damo bacteria in the surface and lower layer sediments at the coastal Mai Po wetland. The occurrence of n-damo bacteria in both the surface and subsurface sediments with high diversity was confirmed in this study. Unlike the two other known n-damo communities from coastal areas, the pmoA gene-amplified sequences in the present work clustered not only with some freshwater subclusters but also within three newly erected marine subclusters mostly, indicating the unique niche specificity of n-damo bacteria in this wetland. Results suggested vegetation affected the distribution and community structures of n-damo bacteria in the sediments and n-damo could coexist with sulfate-reducing methanotrophs in the coastal ecosystem. Community structures of the Mai Po n-damo bacteria based on 16S rRNA gene were different from those of either the freshwater or the marine. In contrast, structures of the Mai Po n-damo communities based on pmoA gene grouped with the marine ones and were clearly distinguished from the freshwater ones. The abundance of n-damo bacteria at this wetland was quantified using 16S rRNA gene PCR primers to be 2.65-6.71 × 10(5) copies/g dry sediment. Ammonium and nitrite strongly affected the community structures and distribution of n-damo bacteria in the coastal Mai Po wetland sediments. PMID:25219532

  6. Complex community of nitrite-dependent anaerobic methane oxidation bacteria in coastal sediments of the Mai Po wetland by PCR amplification of both 16S rRNA and pmoA genes.

    PubMed

    Chen, Jing; Zhou, Zhichao; Gu, Ji-Dong

    2015-02-01

    In the present work, both 16S rRNA and pmoA gene-based PCR primers were employed successfully to study the diversity and distribution of n-damo bacteria in the surface and lower layer sediments at the coastal Mai Po wetland. The occurrence of n-damo bacteria in both the surface and subsurface sediments with high diversity was confirmed in this study. Unlike the two other known n-damo communities from coastal areas, the pmoA gene-amplified sequences in the present work clustered not only with some freshwater subclusters but also within three newly erected marine subclusters mostly, indicating the unique niche specificity of n-damo bacteria in this wetland. Results suggested vegetation affected the distribution and community structures of n-damo bacteria in the sediments and n-damo could coexist with sulfate-reducing methanotrophs in the coastal ecosystem. Community structures of the Mai Po n-damo bacteria based on 16S rRNA gene were different from those of either the freshwater or the marine. In contrast, structures of the Mai Po n-damo communities based on pmoA gene grouped with the marine ones and were clearly distinguished from the freshwater ones. The abundance of n-damo bacteria at this wetland was quantified using 16S rRNA gene PCR primers to be 2.65-6.71 × 10(5) copies/g dry sediment. Ammonium and nitrite strongly affected the community structures and distribution of n-damo bacteria in the coastal Mai Po wetland sediments.

  7. Chemical composition and sources of coastal marine aerosol particles during the 2008 VOCALS-REx campaign

    SciTech Connect

    Lee, Y. -N.; Springston, S.; Jayne, J.; Wang, J.; Hubbe, J.; Senum, G.; Kleinman, L.; Daum, P. H.

    2014-01-01

    The chemical composition of aerosol particles (Dp ≤ 1.5 μm) was measured over the southeast Pacific Ocean during the VAMOS (Variability of the American Monsoon Systems) Ocean-Cloud-Atmosphere-Land Study Regional Experiment (VOCALS-Rex) between 16 October and 15 November 2008 using the US Department of Energy (DOE) G-1 aircraft. The objective of these flights was to gain an understanding of the sources and evolution of these aerosols, and of how they interact with the marine stratus cloud layer that prevails in this region of the globe. Our measurements showed that the marine boundary layer (MBL) aerosol mass was dominated by non-sea-salt SO42−, followed by Na+, Cl, Org (total organics), NH4+, and NO3, in decreasing order of importance; CH3SO3 (MSA), Ca2+, and K+ rarely exceeded their limits of detection. Aerosols were strongly acidic with a NH4+ to SO42− equivalents ratio typically < 0.3. Sea-salt aerosol (SSA) particles, represented by NaCl, exhibited Cl deficits caused by both HNO3 and H2SO4, but for the most part were externally mixed with particles, mainly SO42−. SSA contributed only a small fraction of the total accumulation mode particle number concentration. It was inferred that all aerosol species (except SSA) were of predominantly continental origin because of their strong land-to-sea concentration gradient. Comparison of relative changes in median values suggests that (1) an oceanic source of NH3 is present between 72° W and 76° W, (2) additional organic aerosols from biomass burns or biogenic precursors were emitted from coastal regions south of 31° S, with possible cloud processing, and (3) free tropospheric (FT) contributions to MBL gas and aerosol

  8. Magnetic properties of marine magnetotactic bacteria in a seasonally stratified coastal pond (Salt Pond, MA, USA)