Chemical changes in organic matter after fungal colonization in a nitrogen fertilized and unfertilized Norway spruce forest

DOE PAGES

Nicolas, Cesar; Almeida, Juan P.; Ellstrom, Magnus; ...

2017-07-08

Decomposition and transformation of organic matter (OM) in forest soils are conducted by the concomitant action of saprotrophic and mycorrhizal fungi. Here, we examine chemical changes in OM after fungal colonization in nitrogen fertilized and unfertilized soils from a Norway spruce forest. Sand-filled bags amended with composted maize leaves were placed in the forest soil and harvested after 17 months. Infrared and near edge X-ray absorption fine structure spectroscopies were used to study the chemical changes in the OM. Fungal community composition of the bags was also evaluated. The proportion of ectomycorrhizal fungi declined in the fertilized plots, but themore » overall fungal community composition was similar between N treatments. Decomposition of the OM was, independently of the N level or soil horizon, accompanied by an increase of C/N ratio of the mesh-bag content. Furthermore, the proportions of carboxylic compounds in the incubated OM increased in the mineral horizon, while heterocyclic-N compounds decreased, especially in unfertilized plots with higher N demand from the trees.« less

Chemical changes in organic matter after fungal colonization in a nitrogen fertilized and unfertilized Norway spruce forest

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nicolas, Cesar; Almeida, Juan P.; Ellstrom, Magnus

Decomposition and transformation of organic matter (OM) in forest soils are conducted by the concomitant action of saprotrophic and mycorrhizal fungi. Here, we examine chemical changes in OM after fungal colonization in nitrogen fertilized and unfertilized soils from a Norway spruce forest. Sand-filled bags amended with composted maize leaves were placed in the forest soil and harvested after 17 months. Infrared and near edge X-ray absorption fine structure spectroscopies were used to study the chemical changes in the OM. Fungal community composition of the bags was also evaluated. The proportion of ectomycorrhizal fungi declined in the fertilized plots, but themore » overall fungal community composition was similar between N treatments. Decomposition of the OM was, independently of the N level or soil horizon, accompanied by an increase of C/N ratio of the mesh-bag content. Furthermore, the proportions of carboxylic compounds in the incubated OM increased in the mineral horizon, while heterocyclic-N compounds decreased, especially in unfertilized plots with higher N demand from the trees.« less

Using organic matter gradients to predict mercury cycling following environmental changes

NASA Astrophysics Data System (ADS)

Bjorn, E.; Bravo, A. G.; Jonsson, S.; Seelen, E.; Skrobonja, A.; Skyllberg, U.; Soerensen, A.; Zhu, W.

2017-12-01

The biogeochemical cycling of mercury (Hg) includes redox and methylation transformation reactions, largely mediated by microorganisms. These reactions are decisive for mobility and bioavailability of Hg in ecosystems. Organic matter (OM) plays several critical roles in these important transformation reactions. In many aquatic systems, the composition of OM is naturally diverse and dynamic, and subject to further alternations due to ecosystem changes induced by climate, eutrophication, land use, and industrial activities. We will present recent findings on how changing characteristics of OM along natural salinity and carbon gradients control Hg methylation and reduction reactions, as well as bioaccumulation processes. We will further discuss potential changes to Hg cycling, primarily in coastal seas, following ecosystem perturbations which alter the amount and characteristics of OM. The presentation will focus on recent research advancements describing how: (i) the binding of Hg to thiol functional groups in OM controls the chemical speciation of Hg, and thereby its availability for chemical reactions and uptake in biota, (ii) the composition of OM is a primary controlling factor for methylation and reduction rates of divalent Hg by electron donation and shuttling processes, (iii) the amount and characteristics of dissolved OM affect the structure and productivity of the pelagic food web, and thereby the biomagnification of methylmercury.

Freshwater processing of terrestrial dissolved organic matter: What governs lability?

NASA Astrophysics Data System (ADS)

D'Andrilli, J.; Smith, H. J.; Junker, J. R.; Scholl, E. A.; Foreman, C. M.

2016-12-01

Aquatic and terrestrial ecosystems are linked through the transfer of energy and materials. Allochthonous organic matter (OM) is central to freshwater ecosystem function, influencing local food webs, trophic state, and nutrient availability. In order to understand the nature and fate of OM from inland headwaters to the open ocean, it is imperative to understand the links between OM lability and ecosystem function. Thus, biological, chemical, and physical factors need to be evaluated together to inform our understanding of environmental lability. We performed a laboratory processing experiment on naturally occurring OM leachates from riparian leaves, grasses, and pine needles. Measures of water chemistry, OM optical and molecular characterization, bacterial abundances, microbial assemblage composition, respiration, and C:N:P were integrated to discern the nature and fate of labile and recalcitrant OM in a freshwater stream. Peak processing of all OM sources in the stream water occurred after two days, with spikes in bacterial cell abundances, respiration rates, microbial assemblage shifts, and maximum C utilization. Respiration rates and microbial assemblages were dependent on the degree of lability of the OM molecular composition. Within the first few days, no differences in respiration rates were observed between leachate sources, however, beyond day five, the rates diverged with C processing efficiency correlated with OM lability. Originally comprised of amino acid-like, labile fluorescent species, the inoculated stream water OM became more recalcitrant after 16 days, indicating humification processing over time. Our study highlights the importance of interdisciplinary approaches for understanding the processing and fate of OM in aquatic ecosystems.

Impact of pyrogenic organic matter decomposition and induced priming effect on soil C budget.

NASA Astrophysics Data System (ADS)

Maestrini, Bernardo; Abiven, Samuel

2014-05-01

Pyrogenic organic matter (PyOM) results from the incomplete combustion of biomass and may contribute to constitute an important fraction of soil C in forest and agricultural soils, in the form of charcoal (produced by wildfires) or biochar (anthropogenic). Although many evidences exist on the long mean residence time of PyOM there is still a large uncertainty on PyOM loss processes and rate and on possible induced priming effect on non-PyOM. Therefore determining PyOM mineralization rate, loss processes and possible induced priming effect on soil organic matter decomposition are key issues to understand the impact of PyOM on the carbon (C) cycle. We investigated the impact of PyOM on soil C budget by combining results from three independent studies: (i) a field study to investigate PyOM mineralization rate and the relative importance of PyOM loss processes, (ii) a PyOM and soil incubation experiment to correlate C and N mineralization rates, (iii) a review of the priming effect induced by PyOM on soil organic C. We employed 13C labelled pinewood-derived PyOM for the field experiment and 13C labelled ryegrass-derived PyOM in the incubation experiment to trace PyOM losses. In the field experiment it was observed that: (i) Pyrolysis process reduced pinewood decomposition by a factor of 60, (ii) leaching and translocation of fresh PyOM along the soil profile were negligible compared to losses as CO2. In the incubation experiment we found that ryegrass induced a two phase priming effect on native soil organic matter, with a positive priming effect followed by a negative priming effect phase, we also found that ryegrass-derived PyOM decomposition was much slower than pinewood one. The different decomposition rate results probably from the different aromaticity of the two PyOM together with the different set-up of the two experiments. Both the incubation experiment and the meta-analysis revealed that PyOM may induce a two-phase priming effect on native soil organic matter decomposition: positive on the short term and negative on the long term. The meta-analysis showed that that positive priming effect is induced mostly on the native soil organic matter on the short term and by PyOM characterised by a low C content. This result was not confirmed on the freshly added organic matter. We believe that the presence of a labile fraction in PyOM may induce positive priming effect on the short term by mean of co-metabolism. We conclude that PyOM chemical composition and feedstock play an important role in predicting PyOM mineralization rate, and that on the short term PyOM may induce a positive priming effect therefore decreasing the abatement potential of PyOM as a C-sink.

Effects of species and season on chemical composition and ruminal crude protein and organic matter degradability of some multi-purpose tree species by West African dwarf rams.

PubMed

Arigbede, O M; Anele, U Y; Südekum, K-H; Hummel, J; Oni, A O; Olanite, J A; Isah, A O

2012-04-01

Seasonal chemical composition and ruminal organic matter (OM) and crude protein (CP) degradabilities were determined in four tropical multi-purpose tree species (MPTS) namely; Pterocarpus santalinoides, Grewia pubescens, Enterolobium cyclocarpum and Leucaena leucocephala. Three West African dwarf (WAD) rams fitted with permanent rumen cannula were used for the degradability trials. Foliage samples were collected four times to represent seasonal variations as follows: January--mid dry; April--late dry; July--mid rainy and October--late rainy seasons. Leaf samples were randomly collected from the trees for estimation of dry matter (DM) and chemical composition. Ruminal in sacco OM and CP degradabilities were estimated from residues in nylon bags. All samples had high CP (161-259 g/kg DM) and moderate fibre concentrations [neutral detergent fibre (without residual ash], 300-501 g/kg DM; acid detergent fibre (without residual ash), 225-409 g/kg DM and acid detergent lignin, 87-179 g/kg DM across seasons. Interaction effects of species and season on chemical composition were highly significant (p = 0.001) except for trypsin inhibitor (p = 0.614). The MPTS recorded more than 60% OM and CP degradability at 24 h, which implied that they were all highly degradable in the rumen. Their incorporation into ruminant feeding systems as dry season forage supplements is therefore recommended. © 2011 Blackwell Verlag GmbH.

Biochemical resistance of pyrogenic organic matter in fire-affected mineral soils of Southern Europe

NASA Astrophysics Data System (ADS)

Knicker, H.; González Vila, F. J.; Clemente Salas, L.

2012-04-01

Incorporated into the soil, naturally formed pyrogenic organic matter (PyOM) is considered as highly recalcitrant, but direct estimation of PyOM decomposition rates are scarce. With this aim in mind, we subjected organic matter (OM) of fire-affected and unaffected soils to biochemical degradation under laboratory conditions and monitored CO2 production over a period of seven months. The soils derived from fire affected and unaffected areas of the Sierra de Aznalcóllar and the Doñana National Park, Southern Spain. Virtual fractionation of the solid-state 13C nuclear magnetic resonance (NMR) spectra of the fire affected soils into fire-unaffected soil organic matter (SOM) and PyOM yielded charcoal C contributions of 30 to 50% to the total organic C (Corg) of the sample derived from the Aznalcóllar region. Fitting the respiration data with a double exponential decay model revealed a fast carbon flush during the first three weeks of the experiment. Solid-state 13C NMR spectroscopy evidenced the contribution of aromatic moieties of the PyOM to this initial carbon release and to the biosynthesis of new microbial biomass. The input of PyOM resulted in an increase of the mean residence time (MRT) of the slow OM pool of the soil by a factor of 3 to 4 to approximately 40 years which rises doubts rises doubts about the presumed big influence of PyOM as an additional C-sink in soils. On the other hand, although being small the difference in turnover rates is evident and has some major implication with respect to long-term alteration of the chemical composition of OM in fire-affected soils. Based on the obtained results and the analysis of PyOM in other soil systems, a conceptual model is presented which can explain the different behavior of PyOM under different soil conditions.

Structural composition of organic matter in particle-size fractions of soils along a climo-biosequence in the main range of Peninsular Malaysia

NASA Astrophysics Data System (ADS)

Jafarzadeh-Haghighi, Amir Hossein; Shamshuddin, Jusop; Hamdan, Jol; Zainuddin, Norhazlin

2016-09-01

Information on structural composition of organic matter (OM) in particle-size fractions of soils along a climo-biosequence is sparse. The objective of this study was to examine structural composition and morphological characteristics of OM in particle-size fractions of soils along a climo-biosequence in order to better understand the factors and processes affecting structural composition of soil organic matter. To explore changes in structural composition of OM in soils with different pedogenesis, the A-horizon was considered for further analyses including particle-size fractionation, solid-state 13C nuclear magnetic resonance (NMR) spectroscopy and scanning electron microscopy (SEM). Due to the increase in the thickness of organic layer with increasing elevation, the A-horizon was situated at greater depth in soils of higher elevation. The relationship between relative abundances of carbon (C) structures and particle-size fractions was examined using principal component analysis (PCA). It was found that alkyl C (20.1-73.4%) and O-alkyl C (16.8-67.7%) dominated particle-size fractions. The proportion of alkyl C increased with increasing elevation, while O-alkyl C showed an opposite trend. Results of PCA confirmed this finding and showed the relative enrichment of alkyl C in soils of higher elevation. Increase in the proportion of alkyl C in 250-2000 μm fraction is linked to selective preservation of aliphatic compounds derived from root litter. SEM results showed an increase in root contribution to the 250-2000 μm fraction with increasing elevation. For the <53 μm fraction, pedogenic process of podzolization is responsible for the relative enrichment of alkyl C. This study demonstrates that changes in structural composition of OM in particle-size fractions of soils along the studied climo-biosequence are attributed to site-specific differences in pedogenesis as a function of climate and vegetation.

Major Sources of Organic Matter in a Complex Coral Reef Lagoon: Identification from Isotopic Signatures (δ13C and δ15N)

PubMed Central

Briand, Marine J.; Bonnet, Xavier; Goiran, Claire; Guillou, Gaël; Letourneur, Yves

2015-01-01

A wide investigation was conducted into the main organic matter (OM) sources supporting coral reef trophic networks in the lagoon of New Caledonia. Sampling included different reef locations (fringing, intermediate and barrier reef), different associated ecosystems (mangroves and seagrass beds) and rivers. In total, 30 taxa of macrophytes, plus pools of particulate and sedimentary OM (POM and SOM) were sampled. Isotopic signatures (C and N) of each OM sources was characterized and the composition of OM pools assessed. In addition, spatial and seasonal variations of reef OM sources were examined. Mangroves isotopic signatures were the most C-depleted (-30.17 ± 0.41 ‰) and seagrass signatures were the most C-enriched (-4.36 ± 0.72 ‰). Trichodesmium spp. had the most N-depleted signatures (-0.14 ± 0.03 ‰) whereas mangroves had the most N-enriched signatures (6.47 ± 0.41 ‰). The composition of POM and SOM varied along a coast-to-barrier reef gradient. River POM and marine POM contributed equally to coastal POM, whereas marine POM represented 90% of the POM on barrier reefs, compared to 10% river POM. The relative importance of river POM, marine POM and mangroves to the SOM pool decreased from fringing to barrier reefs. Conversely, the relative importance of seagrass, Trichodesmium spp. and macroalgae increased along this gradient. Overall, spatial fluctuations in POM and SOM were much greater than in primary producers. Seasonal fluctuations were low for all OM sources. Our results demonstrated that a large variety of OM sources sustain coral reefs, varying in their origin, composition and role and suggest that δ13C was a more useful fingerprint than δ15N in this endeavour. This study also suggested substantial OM exchanges and trophic connections between coral reefs and surrounding ecosystems. Finally, the importance of accounting for environmental characteristics at small temporal and spatial scales before drawing general patterns is highlighted. PMID:26134985

Sources, transformation and fate of particulate amino acids and hexosamines under varying hydrological regimes in the tropical Wenchang/Wenjiao Rivers and Estuary, Hainan, China

NASA Astrophysics Data System (ADS)

Unger, Daniela; Herbeck, Lucia S.; Li, Min; Bao, Hongyan; Wu, Ying; Zhang, Jing; Jennerjahn, Tim

2013-04-01

The small tropical Wenchang and Wenjiao Rivers on the island of Hainan, tropical China, are affected by effluents from municipal sewage, aquaculture and agriculture, and by contrasting hydrological regimes related to monsoon and tropical storms. In order to obtain information on the sources, transformation and fate of organic matter (OM) we investigated the amount and composition of amino acids and hexosamines as well as the carbon isotope composition in suspended particulate matter (SPM) from the Wenchang/Wenjiao Estuary. SPM was collected along the salinity gradient starting from the river sites, along the lagoon-shaped Bamen Bay to coastal waters during four sampling campaigns between 2006 and 2009. SPM concentrations ranged between 4.7 and 58.2 mg L-1. Apart from highest values after heavy rain events in spring and summer, SPM showed little seasonal variation, but increased with salinity. From SPM POC% (1.2-20.9%), C/N (4.9-16.5) and δ13Corg (-31.5 to -19.5‰), the molar composition and content of amino acids and hexosamines (8.2-156.2 mg g-1 dry weight) and by comparison with sediments, mangroves, soils and plants we are able to show that soil-derived material, freshwater and marine plankton were the major sources of suspended OM. High POC and amino acid contents were related to primary production sustained by dissolved nutrients to a large extent stemming from municipal and aquaculture effluents. Factor analysis showed that the suite of biogeochemical parameters measured clearly depict the terrestrial vs. marine origin and the freshness/reactivity of OM. The four groups of samples resulting from cluster analysis were basically related to varying hydrological regimes. With respect to the sources, degradation and fate of particulate OM the major factors were: (i) the year round input of labile, amino acid rich riverine OM matter at the freshwater dominated sites, (ii) high input of degraded soil OM after heavy rains with dispersal throughout the estuary and export to the adjacent coastal area, (iii) significant production of labile marine OM especially during summer inside the bay and the (iv) dominance of refractory marine OM during winter and spring season and in the offshore region. While a major part of the fresh OM fuelled by anthropogenic nutrients appears to be stored or recycled inside the bay, periodic torrential rainfalls can lead to a pulsed export of this OM to the coastal area where it may adversely affect seagrass meadows and coral reefs.

Micro-fracture Behavior of Organic Matters in Kerogen-Rich Shale (KRS) Composites from Micro- to Milli-meter Scales

NASA Astrophysics Data System (ADS)

Haque, M. H.; Han, Y.; Hull, K. L.; Abousleiman, Y. N.

2017-12-01

Understanding the failure behavior of kerogen-rich shale (KRS) at multiscale is critical to efficient hydraulic fracture stimulations in unconventional source shale reservoirs. As a composite material consisting of compacted clay particles, silt-sized grains, and organic matter (OM), KRS is highly complex both structurally and mechanically. The OM, which is intertwined within the shale matrix, presents a particular challenge as it can be much more compliant than its surrounding minerals while at the same time have a significantly higher tensile strength. The mode-I fracture toughness and tensile failure behavior of KRS has been studied at the core scale by traditional rock mechanics methods i.e., Brazilian tests and more recently with non-traditional approaches at the micro-scale using nanoindentation techniques. However, core scale testing fails in precisely capturing the effects of OM due to its coarse resolution, while nanoindention may capture the behavior of isolated component but in some cases miss the collective properties of the composite system. To bridge this gap, while still complying with ASTM/ISRM standards in principle, we investigate fracture initiation and propagation in KRS using the single-edge notched beam (SENB) miniature samples with span length in the millimeter scale. The size scale attempts to isolate the contributions from individual components, especially the OM, to the emergent and systematic fracturing behavior of KRS. Crack propagation along and across the bedding planes have left noticeable signatures on fractured OM while travelling through and around an OM body depending upon its size and spatial position along the crack path illustrating what looks like crack arrest and/or crack bridging in a composite porous matrix. The fractured surface of OM, even being polymeric in nature, exhibits smooth and even surface profile when ripped apart but not in all observed surfaces. Unique microscale features such as- ridges, twists, and inclusions have also been observed for the OM indicating a mix of complex modes of failures. This study helps further the understanding of fracture morphologies in source rock reservoirs.

Composition of whole and water extractable organic matter of cattle manure affected by management practices

USDA-ARS?s Scientific Manuscript database

Organic matter (OM) is a major component of animal manure. In this chapter, we present two case studies on the multiple spectral features of whole and water extractable organic matter (WEOM) of cattle (beef and dairy) manure affected by differing management practices. Using wet chemistry and Fourie...

Contents and composition of organic matter in subsurface soils affected by land use and soil mineralogy

NASA Astrophysics Data System (ADS)

Ellerbrock, Ruth H.; Kaiser, Michael

2010-05-01

Land use and mineralogy affect the ability of surface as well as subsurface soils to sequester organic carbon and their contribution to mitigate the greenhouse effect. This study aimed to investigate the long-term impact of land use (i.e., arable and forest) and soil mineralogy on contents and composition of soil organic matter (SOM) from subsurface soils. Seven soils different in mineralogy (Albic and Haplic Luvisol, Colluvic and Haplic Regosol, Haplic and Vertic Cambisol, Haplic Stagnosol) were selected within Germany. Soil samples were taken from forest and adjacent arable sites. First, particulate and water soluble organic matter were separated from the subsurface soil samples. From the remaining solid residues the OM(PY) fractions were separated, analyzed for its OC content (OCPY) and characterized by FTIR spectroscopy. For the arable subsurface soils multiple regression analyses indicate significant positive relationships between the soil organic carbon contents and the contents of i) exchangeable Ca and oxalate soluble Fe, and Alox contents. Further for the neutral arable subsurface soils the contents OCPY weighted by its C=O contents were found to be related to the contents of Ca indicating interactions between OM(PY) and Ca cations. For the forest subsurface soils (pH <5) the OCPY contents were positively related with the contents of Na-pyrophosphate soluble Fe and Al. For the acidic forest subsurface soils such findings indicate interactions between OM(PY) and Fe3+ and Al3+ cations. The effects of land use and soil mineralogy on contents and composition of SOM and OM(PY) will be discussed.

Nanoscale Structure Of Organic Matter Explain Its Recalcitrance To Degradation

NASA Astrophysics Data System (ADS)

Spagnol, M.; Salati, S.; Papa, G.; Tambone, F.; Adani, F.

2009-04-01

Recalcitrance can be defined as the natural resistance of organic matter (OM) to microbial and enzymatic deconstruction (Himmel et al., 2007). The nature of OM recalcitrance remained not completely understood and more studies need above all to elucidate the role of the chemical topography of the OM at nanometer scale. Hydrolytic enzymes responsible of OM degradation have a molecular weight of 20-25 kD, corresponding to a size of about 4 nm, hardly penetrate into micropores (i.e. the pore having a diameter < 2 nm) and small mesopores (i.e. pores having a diameter 2 < 50 nm) of OM structures, so that their activities are confined only to a portion of the total surface (Zimmerman et al., 2004; Chesson, 1997; Adani et al., 2006). As consequence of that the characterization of the organic matter at nano-scale became interesting in view to explain OM recalcitrance. The aim of this work was to asses the effect of the nano-scale structure of OM versus its recalcitrance. The evolution of organic matter of organic matrices was studied in two systems: plant residue-soil system and simulated landfill system. Plant residues were incubated in soil for one year and recalcitrant fraction, i.e. humic acid, was isolated and studied. Laboratory simulated landfill considered organic fraction of municipal solid waste sampled at different stages of evolution from a full scale plant and incubated under anaerobic condition for one year. In addition the nano-scale structure of fossilized OM (leonardite, chair coal and graphite) was detected as used as model of recalcitrant OM. Nano-scale structures were detected by using meso and microporosity detection. In particular microporosity was determined by adsorption method using CO2 at 273 K and Non Local Density Functional Theory (NLDFT) method was applied to measure the CO2 adsorption isotherms. On the other hand mesoporosity was detected by using N2 adsorption method at 77 K. The BET (Brunauer-Emmett-Teller) equation and the BJH (Barret-Joyner-Halenda) equation were applied respectively to measure specific surface area and mesoporosity. Macromolecular composition of OM was investigated by using CP MAS 13NMR and wet chemical analyses. Results obtained showed how OM evolved increasing microporosity and decreasing meso porosity. This was the result of the preservation of recalcitrant OM versus degradation of the more labile fraction, suggesting that the more recalcitrant fraction was characterized by high microporosity. Another confirmation of these results comes from the analysis of the same OM after the removing of the labile fraction by acid hydrolysis to discover the core-OM, which was characterized by a higher microposrosity with respect the bulk OM. In conclusion it can be showed that not only the chemical composition but, also, the physical structure of organic matter defined its recalcitrance. References Adani, F.; Spagnol, M.; Genevini, P. Biogeochemistry 2006, 78, 85-96. Himmel, M.E.; Ding S.Y.; Johnson, D.K.; Adney, W.S.; Nimlos, M.R.; Brady, J.W.; Foust, T.D. Sci. 2007, 315, 804-807. Chesson, A. In Driven by nature Plant Litter Quality and Decomposition. Cadisch, G.; Giller, K.E. Eds.; CAB International: Wallinford, UK 1997, pp 47-66. Zimmerman, A.R.; Goyne, K.W.; Chorover, J, Komarneni, S.; Brantley, S.L. Org Geochem. 2004, 35, 355-375.

Dissolved organic matter (DOM) in pore water of Arctic Ocean sediments: linking DOM molecular composition with microbial community structure

NASA Astrophysics Data System (ADS)

Rossel, P. E.; Bienhold, C.; Boetius, A.; Dittmar, T.

2016-02-01

Marine organic matter (OM) that sinks from surface waters to the seafloor is the energy and carbon source for benthic communities. These communities produce dissolved organic matter (DOM) in the process of remineralization, enriching the sediment porewater with fresh DOM compounds. In the Arctic Ocean, primary production is limited by nutrients and light and is thus strongly influenced by sea ice cover. Ice cover is expected to further decrease due to global warming, which may have important consequences for primary production and the quantity and quality of OM exported to the seafloor. This study focused on: 1) the molecular composition of the DOM in sediment pore waters of the deep Eurasian Arctic basins, 2) whether there is any relation between Arctic Ocean ice cover and DOM composition and 3) whether the DOM composition correlates with microbial community structure. Molecular data, obtained via 15 Tesla Fourier transform ion cyclotron resonance mass spectrometry, were statistically correlated with environmental parameters. The productive ice margin stations showed higher abundances of molecular formulae of peptides, unsaturated aliphatics and saturated fatty acids. This molecular trend is indicative of fresh OM and phytodetritus deposition, compared to the northernmost, ice-covered stations which had stronger aromatic signals. Benthic bacterial community structure, as assessed with the fingerprinting method ARISA, was significantly correlated with DOM molecular composition. Further analyses using Illumina next-generation sequencing will enable the taxonomic identification of specific bacterial groups and their interdependence with DOM compounds. This study contributes to the understanding of the coupling between Arctic Ocean productivity and its depositional regime, and provides first insights into potential links between microbial community structure and DOM molecular composition in Arctic sediments

Effects of Variable Oxygen Concentrations on the Sinking Fluxes and Composition of Organic Matter in The Baltic Sea

NASA Astrophysics Data System (ADS)

Cisternas-Novoa, C.; Le Moigne, F. A. C.; Roa, J.; Wagner, H.; Engel, A.

2016-02-01

The downward flux of organic matter (OM) from the euphotic zone is critical to understand the biogeochemistry cycles in the ocean. Local changes in stratification, nutrient inputs, community structure and oxygen concentrations potentially affect the magnitude of OM flux. The Baltic Sea is a unique environment with strong natural gradients of primary productivity, nutrients and O2 concentrations. The genuine effect of oxygen minimum deficiency on the fate of sinking OM and the efficiency of the biologic carbon pump has yet to be clarified. Previous work suggested that under oxygen deficiency, nitrogen rich amino acids are preferentially utilized causing nitrogen loss from the water column (van Mooy et al., 2002, Kalvelage et al 2013). Here, we investigate how different oxygen conditions and surface productivity affect sinking particles flux and particles composition in the central Baltic Sea. Sinking OM was collected in June 2015 using surface-tethered free-drifting traps in the Gotland and Landsort deeps. Sinking particles were collected for a period of 48 and 24 hours at four depths from below the mixed layer and down to hypoxic deep waters (40, 60, 110 and 180 m). Fluxes of POC, PON, POP and amino acids were estimated. We will discuss the effect of low oxygen levels on the biological carbon pump associated with fluxes of OM and sinking particles.

Size- and composition-dependent toxicity of synthetic and soil-derived Fe oxide colloids for the nematode Caenorhabditis elegans.

PubMed

Höss, Sebastian; Fritzsche, Andreas; Meyer, Carolin; Bosch, Julian; Meckenstock, Rainer U; Totsche, Kai Uwe

2015-01-06

Colloidal iron oxides (FeOx) are increasingly released to the environment due to their use in environmental remediation and biomedical applications, potentially harming living organisms. Size and composition could affect the bioavailability and toxicity of such colloids. Therefore, we investigated the toxicity of selected FeOx with variable aggregate size and variably composed FeOx-associated organic matter (OM) toward the nematode Caenorhabditis elegans. Ferrihydrite colloids containing citrate were taken up by C. elegans with the food and accumulated inside their body. The toxicity of ferrihydrite, goethite, and akaganeite was dependent on aggregate size and specific surface area, with EC50 values for reproduction ranging from 4 to 29 mg Fe L(-1). Experiments with mutant strains lacking mitochondrial superoxide dismutase (sod-2) showed oxidative stress for two FeOx and Fe(3+)-ions, however, revealed that it was not the predominant mechanism of toxicity. The OM composition determined the toxicity of mixed OM-FeOx phases on C. elegans. FeOx associated with humic acids or citrate were less toxic than OM-free FeOx. In contrast, soil-derived ferrihydrite, containing proteins and polysaccharides from mobile OM, was even more toxic than OM-free Fh of similar aggregate size. Consequently, the careful choice of the type of FeOx and the type of associated OM may help in reducing the ecological risks if actively applied to the subsurface.

Application of Chromophoric Dissolved Organic Matter Absorbance and Excitation-Emission Matrix Fluorescence Spectra (EEMS) to Investigate Clay-Organic Matter Flocculation Processes in Riverine-Estuarine Systems

NASA Astrophysics Data System (ADS)

Smith, J. P.; Reed, A. H.; Boyd, T. J.

2016-12-01

Changes in hydrodynamic shear, variations in ionic strength (salinity), and to a lesser degree pH, along the salinity gradient influences clay-organic matter (OM) flocculation, disaggregation and particle size distributions with depth in natural river-estuarine waters. The scale and rate of aggregation and disaggregation of specific clay-OM flocs assemblages under different hydrodynamic and physiochemical conditions in estuaries or coastal river systems is an area of ongoing research. Chromophoric dissolved organic matter (CDOM) is the fraction of the DOM pool that absorbs and/or emits light at discrete wavelengths when excited. The CDOM absorbance and Excitation Emission Matrix (EEM) fluorescence spectra in natural waters can potentially be used to investigate clay-OM interactions and implications for formation kinetics, size, strength, and settling velocities of cohesive particulate aggregates (flocs and suspended sediments) as they respond to hydrodynamic shear under different physiochemical conditions. Size characteristics of particulate matter and sediment samples collected from the Misa River in Italy in 2014 were compared to the optical properties of the water column to identify potential OM components/constituents influencing flocculation processes in riverine-estuarine systems. The EEMs results were coupled with a parallel factor analysis (PARAFAC) model to associate previously identified EEMS regions of CDOM components to those found in the waters of this study and identify the main OM components/constituents influencing the multi-way variance of the EEMS data. Initial results from the Misa River and subsequent studies show a difference in dominant DOM types by salinity, clay-OM composition, and flow conditions that may be indicative of system specific particle flocculation and disaggregation under different hydrodynamic regimes. These results suggest that the CDOM absorbance and EEMS fluorescence spectra in natural waters can potentially be used to qualify the influence of OM on the flocculation and sedimentation of clay particulates in river-estuarine systems under different physiochemical and hydrodynamic conditions.

Identifying microbially mediated transformations of DOC across season and tide from simultaneous changes in whole community gene expression and in mass spectra generated by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FTICR-MS)

NASA Astrophysics Data System (ADS)

Ballantyne, F.; Medeiros, P. M.; Moran, M. A.; Song, C.; Whitman, W. B.; Washington, B.; Yu, M.; Lee, J.

2017-12-01

Despite the advent of methods enabling high resolution characterization of metabolic activity and of organic matter, linking microbial metabolism to organic matter transformations remains a challenge. By sequencing metatranscriptomes and using Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FTICR-MS) to characterize organic matter (OM) at the beginning and at the end of incubations of estuarine water across tide and season, we sought to link observed a changes in OM composition to microbial metabolism. We used linear models and K means clustering to identify clusters of genes that responded coherently across season, which accounted for most of the variability in gene expression, over tidal regime, which explained the majority of the remaining variation, and over time during the 24 hour incubations. We used an approach from the field of signal processing, that to our knowledge has not been used to analyze FTICR-MS data, to identify formulae of compounds that changed in concentration during the incubations. This approach, based on the discrete wavelet transform (DWT), allowed us to overcome some of the challenges associated with analyzing FTICR-MS data: variable ionization of organic compounds, signal suppression by high concentration compounds, and uncertainty about how to normalize changes across spectra. We were able to link clusters of metabolic and transporter genes to changes in OM composition, and uniquely identify genes based on their cross correlation with changes in FTICR mass spectra. Our approach for analyzing FTICR- MS data enables more robust inference about OM transformations, and linking high resolution changes in gene expression and in OM data during incubations represents an important step toward formulating models of microbial metabolism relevant for predicting biogeochemically relevant C fluxes.

Influence of Biodegradation on the Organic Compounds Composition of Peat.

NASA Astrophysics Data System (ADS)

Serebrennikova, Olga; Svarovskaya, Lidiya; Duchko, Maria; Strelnikova, Evgeniya; Russkikh, Irina

2016-06-01

Largest wetland systems are situated on the territory of the Tomsk region. They are characterized by the high content of organic matter (OM), which undergoes transformation as a result of physical, chemical and biological processes. The composition of peat OM is determined by the nature of initial peat-forming plants, their transformation products and bacteria. An experiment in stimulated microbial impact was carried out for estimating the influence of biodegradation on the composition of peat lipids. The composition of the functional groups in the bacterial biomass, initial peat and peat after biodegradation was determined by IR-spectroscopy using the spectrometer NICOLET 5700. The IR spectra of peat and bacteria organic matter are characterized by the presence of absorption bands in ranges: 3400-3200 cm-1, which refers to the stretching vibrations of OH-group of carboxylic acids and various types of hydrogen bonds; 1738-1671 cm-1 - characteristic stretching vibrations of the C = O group of carboxylic acids and ketones; 1262 cm-1 - stretching vibrations of C-O of carboxylic acids. Group and individual composition of organic compounds in studied samples was determined by gas chromatography-mass-spectrometry.

The Organic Matter Molecular Characteristics of Pyrogenic Solids and Their Aqueous Leachable Fractions

NASA Astrophysics Data System (ADS)

Wozniak, A. S.; Hatcher, P.; Mitra, S.; Bostick, K. W.; Zimmerman, A. R.

2016-02-01

Pyrogenic organic matter (Py-OM), or black carbon (BC), derives from the incomplete combustion of fossil fuels and biomass and is recognized for its impacts on soil chemistry, pollutant transport, climate, and regional and global carbon cycling. In fact, Py-OM is commonly applied to agricultural plots, in the form of "biochars," with the intention of enhancing agricultural production and the expectation of a carbon sequestration side benefit due to Py-OM's refractory and immobile nature. However, several studies of riverine, estuarine, and oceanic waters have detected tracers of dissolved Py-OM in appreciable quantities suggesting that it is more mobile in the environment than previously expected. The quantities and impacts of Py-OM released to aqueous systems are likely dependent on Py-OM molecular characteristics which in turn likely depend on initial combustion conditions and environmental processing. Yet, very little is known about the detailed molecular composition of these materials, let alone their relationships with combustion and environmental processing. Here, pyrophosphate extractable and water leachable components of a range of Py-OM materials (natural charcoals aged in the environment for variable lengths of time, oak and grass combusted over a range of temperatures) are examined by Fourier transform ion cyclotron resonance mass spectrometry. The molecular characteristics of the dissolved and pyrophosphate extractable Py-OM is then compared in the context of production conditions. Results of this study will greatly improve our understanding of Py-OM cycling between watersheds and the oceans.

Morphology, composition, and mixing state of primary particles from combustion sources - crop residue, wood, and solid waste.

PubMed

Liu, Lei; Kong, Shaofei; Zhang, Yinxiao; Wang, Yuanyuan; Xu, Liang; Yan, Qin; Lingaswamy, A P; Shi, Zongbo; Lv, Senlin; Niu, Hongya; Shao, Longyi; Hu, Min; Zhang, Daizhou; Chen, Jianmin; Zhang, Xiaoye; Li, Weijun

2017-07-11

Morphology, composition, and mixing state of individual particles emitted from crop residue, wood, and solid waste combustion in a residential stove were analyzed using transmission electron microscopy (TEM). Our study showed that particles from crop residue and apple wood combustion were mainly organic matter (OM) in smoldering phase, whereas soot-OM internally mixed with K in flaming phase. Wild grass combustion in flaming phase released some Cl-rich-OM/soot particles and cardboard combustion released OM and S-rich particles. Interestingly, particles from hardwood (pear wood and bamboo) and softwood (cypress and pine wood) combustion were mainly soot and OM in the flaming phase, respectively. The combustion of foam boxes, rubber tires, and plastic bottles/bags in the flaming phase released large amounts of soot internally mixed with a small amount of OM, whereas the combustion of printed circuit boards and copper-core cables emitted large amounts of OM with Br-rich inclusions. In addition, the printed circuit board combustion released toxic metals containing Pb, Zn, Sn, and Sb. The results are important to document properties of primary particles from combustion sources, which can be used to trace the sources of ambient particles and to know their potential impacts in human health and radiative forcing in the air.

Organic matter quantity and source affects microbial community structure and function following volcanic eruption on Kasatochi Island, Alaska

USGS Publications Warehouse

Zeglin, Lydia H.; Wang, Bronwen; Waythomas, Christopher F.; Rainey, Frederick; Talbot, Sandra L.

2016-01-01

In August 2008, Kasatochi volcano erupted and buried a small island in pyroclastic deposits and fine ash; since then, microbes, plants and birds have begun to re-colonize the initially sterile surface. Five years post-eruption, bacterial 16S rRNA gene and fungal internal transcribed spacer (ITS) copy numbers and extracellular enzyme activity (EEA) potentials were one to two orders of magnitude greater in pyroclastic materials with organic matter (OM) inputs relative to those without, despite minimal accumulation of OM (< 0.2%C). When normalized by OM levels, post-eruptive surfaces with OM inputs had the highest β-glucosidase, phosphatase, NAGase and cellobiohydrolase activities, and had microbial population sizes approaching those in reference soils. In contrast, the strongest factor determining bacterial community composition was the dominance of plants versus birds as OM input vectors. Although soil pH ranged from 3.9 to 7.0, and %C ranged 100×, differentiation between plant- and bird-associated microbial communities suggested that cell dispersal or nutrient availability are more likely drivers of assembly than pH or OM content. This study exemplifies the complex relationship between microbial cell dispersal, soil geochemistry, and microbial structure and function; and illustrates the potential for soil microbiota to be resilient to disturbance.

Relationship between the water-exchangeable fraction of PAH and the organic matter composition of sediments.

PubMed

Belles, Angel; Alary, Claire; Mamindy-Pajany, Yannick; Abriak, Nor-Edine

2016-12-01

The sorption of PAH on 12 different sediments was investigated and was correlated to their corresponding organic matter (OM) content and quality. For this purpose, the OM was precisely characterized using thermal analysis consisting in the successive combustion and quantification of the increasingly thermostable fractions of the OM. Simultaneously, the water-exchangeable fraction of the sorbed PAH defined as the amount of PAH freely exchanged between the water and the sediment (by opposition to the PAH harshly sorbed to the sediments particles) was determined using a passive sampler methodology recently developed. The water concentrations, when the sediment-water system is equilibrated, were also assessed which allows the determination of the sediment-water distribution coefficients without artifacts introduced by the non water-exchangeable fraction of PAH. Hence, the present study provides the distribution coefficients of PAH between the water and 4 different OM fractions combusted at a specific temperature range. The calculated distribution coefficients demonstrate that the sedimentary OM combusted at the intermediate temperature range (between 300 °C and 450 °C) drives the reversible sorption of PAH while the inferred sorption to the OM combusted at a lower and higher temperature range does not dominate the partitioning process. Copyright © 2016 Elsevier Ltd. All rights reserved.

Effect of variety and harvest date on nutritive value and ruminal degradability of ensiled maize ears.

PubMed

Terler, Georg; Gruber, Leonhard; Knaus, Wilhelm Friedrich

2017-10-01

The nutritive value of whole crop forage maize is influenced by the proportion of ears and stover in the whole crop and by the nutrient composition and digestibility characteristics of the plant parts. An experiment investigating the impact of variety, harvest date and year on the nutritive value of ensiled maize ears was carried out in three consecutive years (2007, 2008 and 2010). Nine different maize varieties were harvested at three different maturity stages (50, 55 and 60% dry matter (DM) content in the ears). After harvest, ears and stover were ensiled separately and afterwards nutrient composition and ruminal nutrient degradability (organic matter (OM), crude protein (CP) and non-fibre carbohydrates (NFC)) were analysed. Variety had a significant influence on content of CP and effective ruminal degradability (ED) of OM at low passage rates, whereas ED of CP and NFC was not affected by variety. In contrast, harvest date and year significantly influenced nutrient composition and ruminal degradability of ensiled maize ears. The content of NFC increased and the content of fibre components as well as ED of OM, CP and NFC declined with processing maturity of the maize plants. At a passage rate of 5% h -1 , ED of OM declined from 75.9% to 68.4%, ED of CP from 82.5% to 73.8% and ED of NFC from 88.0% to 82.3% between the early and late harvest date. The results of this study indicate that the nutrient composition and ruminal degradability of ensiled maize ears are affected mainly by maturity stage at harvest and by year, whereas variety has only little influence.

Long-term litter manipulation alters soil organic matter turnover in a temperate deciduous forest.

PubMed

Wang, Jun-Jian; Pisani, Oliva; Lin, Lisa H; Lun, Olivia O Y; Bowden, Richard D; Lajtha, Kate; Simpson, André J; Simpson, Myrna J

2017-12-31

Understanding soil organic matter (OM) biogeochemistry at the molecular-level is essential for assessing potential impacts from management practices and climate change on shifts in soil carbon storage. Biomarker analyses and nuclear magnetic resonance (NMR) spectroscopy were used in an ongoing detrital input and removal treatment experiment in a temperate deciduous forest in Pennsylvania, USA, to examine how above- and below-ground plant inputs control soil OM quantity and quality at the molecular-level. From plant material to surface soils, the free acyclic lipids and cutin, suberin, and lignin biomarkers were preferentially retained over free sugars and free cyclic lipids. After 20years of above-ground litter addition (Double Litter) or exclusion (No Litter) treatments, soil OM composition was relatively more degraded, as revealed by solid-state 13 C NMR spectroscopy. Under Doubled Litter inputs, soil carbon and phospholipid fatty acid (PLFA) concentrations were unchanged, suggesting that the current OM degradation status is a reflection of microbial-mediated degradation that occurred prior to the 20-year sampling campaign. Soil OM degradation was higher in the No Litter treatments, likely due to the decline in fresh, above-ground litter inputs over time. Furthermore, root and root and litter exclusion treatments (No Roots and No Inputs, respectively) both significantly reduced free sugars and PLFAs and increased preservation of suberin-derived compounds. PLFA stress ratios and the low N-acetyl resonances from diffusion edited 1 H NMR also indicate substrate limitations and reduced microbial biomass with these treatments. Overall, we highlight that storage of soil carbon and its biochemical composition do not linearly increase with plant inputs because the microbial processing of soil OM is also likely altered in the studied forest. Copyright © 2017 Elsevier B.V. All rights reserved.

Origins, seasonality, and fluxes of organic matter in the Congo River

NASA Astrophysics Data System (ADS)

Spencer, Robert G. M.; Hernes, Peter J.; Dinga, Bienvenu; Wabakanghanzi, Jose N.; Drake, Travis W.; Six, Johan

2016-07-01

The Congo River in central Africa represents a major source of organic matter (OM) to the Atlantic Ocean. This study examined elemental (%OC, %N, and C:N), stable isotopic (δ13C and δ15N), and biomarker composition (lignin phenols) of particulate OM (POM) and dissolved OM (DOM) across the seasonal hydrograph. Even though the Congo exhibits an extremely stable intra-annual discharge regime, seasonal variability in OM composition was evident. DOM appears predominantly derived from vascular plant inputs with greater relative contribution during the rising limb and peak in discharge associated with the major November-December discharge maximum. Generally, POM appears to be sourced from soil-derived mineral-associated OM (low C:N, low Λ8, and higher (Ad:Al)v) but the relative proportion of fresh vascular plant material (higher C:N, higher Λ8, and lower (Ad:Al)v) increases with higher discharge. During the study period (September 2009 to November 2010) the Congo exported 29.21 Tg yr-1 of total suspended sediment (TSS), 1.96 Tg yr-1 of particulate organic carbon (POC), and 12.48 Tg yr-1 of dissolved organic carbon. The Congo exports an order of magnitude lower TSS load in comparison to other major riverine sources of TSS (e.g., Ganges and Brahmaputra), but due to its OM-rich character it actually exports a comparable amount of POC. The Congo is also 2.5 times more efficient at exporting dissolved lignin per unit volume compared to the Amazon. Including Congo dissolved lignin data in residence time calculations for lignin in the Atlantic Ocean results in an approximately 10% reduction from the existing estimate, suggesting that this material is more reactive than previously thought.

Effects of sediment composition on inorganic mercury partitioning, speciation and bioavailability in oxic surficial sediments.

PubMed

Zhong, Huan; Wang, Wen-Xiong

2008-01-01

Artificially prepared sediments were used to assess the effects of sediment composition on inorganic Hg partitioning, speciation and bioavailability. Organic coating in sediment greatly increased the Hg partitioning and the amount of bioavailable Hg bound with the clay and the Fe and Mn oxides, but had little effect on that bound with the quartz and calcium carbonate as a result of weaker binding of humic acids and fulvic acids. The clay content increased the concentration of Hg in the sediments but inhibited the gut juice extraction due to the strong binding of Hg-organic matter (OM) complexes. Most Hg in the sediments was complexed by OM (mainly distributed in the organo-complexed phase and the strongly complexed phase), and the Hg-OM complexes (especially Hg in the strongly complexed phase) in sediments contributed much to gut juice extraction. Redistribution of Hg-OM complexes between sediments and gut juices may occur during gut juice extraction and modify Hg bioavailability and speciation in sediments.

Spatial variability in the abundance, composition, and age of organic matter in surficial sediments of the East China Sea

NASA Astrophysics Data System (ADS)

Wu, Ying; Eglinton, Timothy; Yang, Liyang; Deng, Bing; Montluçon, Daniel; Zhang, Jing

2013-12-01

the sources and fate of organic matter (OM) sequestered in continental margin sediments is of importance because the mode and efficiency of OM burial impact the carbon cycle and the regulation of atmospheric CO2 over long time scales. We carried out molecular (lignin-derived phenols from CuO oxidation), elemental, isotopic (δ13C, Δ14C), and sedimentological (grain size and mineral surface area) analyses in order to examine spatial variability in the abundance, source, age of surface sediments of the East China Sea. Higher terrigenous organic matter values were found in the main accumulating areas of fluvial sediments, including the Changjiang (Yangtze) Estuary and Zhejiang-Fujian coastal zone. Isotopic and biomarker data suggest that the sedimentary OM in the inner shelf region was dominated by aged (Δ14C = -423 ± 42‰) but relatively lignin-rich OM (Λ = 0.94 ± 0.57 mg/100 mg OC) associated with fine-grained sediments, suggesting important contributions from soils. In contrast, samples from the outer shelf, while of similar age (Δ14 C = -450 ± 99‰), are lignin poor (Λ = 0.25 ± 0.14 mg/100 mg OC) and associated with coarse-grained material. Regional variation of lignin phenols and OM ages indicates that OM content is fundamentally controlled by hydrodynamic sorting (especially, sediment redistribution and winnowing) and in situ primary production. Selective sorption of acid to aldehyde in clay fraction also modified the ratios of lignin phenols. The burial of lignin in East China Sea is estimated to be relatively efficient, possibly as a consequence of terrigenous OM recalcitrance and/or relatively high sedimentation rates in the Changjiang Estuary and the adjacent Zhejing-Fujian mud belt.

Temporal variability of particulate organic carbon in the lower Changjiang (Yangtze River) in the post-Three Gorges Dam period: Links to anthropogenic and climate impacts

NASA Astrophysics Data System (ADS)

Wu, Ying; Bao, Hongyan; Yu, Hao; Zhang, Jing; Kattner, Gerhard

2015-11-01

Suspended particles from the lower Changjiang were collected monthly from 2003 to 2011, which corresponds to the three construction periods of the Three Gorges Dam. Organic carbon (%OC), organic carbon to total nitrogen molar ratio, stable carbon isotope, and terrestrial biomarkers were examined. Rating curve studies were applied for the temporal trend analysis. The composition of particulate lignin phenols exhibited clear annual and periodic variations but only minor seasonal changes. Lignin phenol ratios (vanillyl/syringyl and cinnamyl/vanillyl) indicated that the terrigenous organic matter (OM) was primarily composed of woody and nonwoody tissue derived from angiosperm plants. The low-lignin phenol yields (Λ8) in combination with higher acid to aldehyde ratios reflected a substantial contribution from soil OM to the particle samples or modifications during river transport. The temporal shift of the lignin phenol vegetation index with the sediment load during the flood seasons revealed particulate organic matter (POM) erosion from soils and the impact of hydrodynamic processes. The dam operations affected the seasonal variability of terrigenous OM fluxes, although the covariation of lignin and sediment loads with discharged water implies that unseasonal extreme conditions and climate change most likely had larger influences, because decreases in the sediment load and lignin flux alter the structure and composition of particulate OM (POM) on interannual time scales, indicating that they may be driven by climate variability. The modification of the composition and structure of POM will have significant impacts on regional carbon cycles and marine ecosystems.

Digging a Little Deeper: Microbial Communities, Molecular Composition and Soil Organic Matter Turnover along Tropical Forest Soil Depth Profiles

NASA Astrophysics Data System (ADS)

Pett-Ridge, J.; McFarlane, K. J.; Heckman, K. A.; Reed, S.; Green, E. A.; Nico, P. S.; Tfaily, M. M.; Wood, T. E.; Plante, A. F.

2016-12-01

Tropical forest soils store more carbon (C) than any other terrestrial ecosystem and exchange vast amounts of CO2, water, and energy with the atmosphere. Much of this C is leached and stored in deep soil layers where we know little about its fate or the microbial communities that drive deep soil biogeochemistry. Organic matter (OM) in tropical soils appears to be associated with mineral particles, suggesting deep soils may provide greater C stabilization. However, few studies have evaluated sub-surface soils in tropical ecosystems, including estimates of the turnover times of deep soil C, the sensitivity of this C to global environmental change, and the microorganisms involved. We quantified bulk C pools, microbial communities, molecular composition of soil organic matter, and soil radiocarbon turnover times from surface soils to 1.5m depths in multiple soil pits across the Luquillo Experimental Forest, Puerto Rico. Soil C, nitrogen, and root and microbial biomass all declined exponentially with depth; total C concentrations dropped from 5.5% at the surface to <0.5% at 140cm depth. High-throughput sequencing highlighted distinct microbial communities in surface soils (Acidobacteria and Proteobacteria) versus those below the active rooting zone (Verrucomicrobia and Thaumarchaea). High resolution mass spectrometry (FTICR-MS) analyses suggest a shift in the composition of OM with depth (especially in the water soluble fraction), an increase in oxidation, and decreasing H/C with depth (indicating higher aromaticity). Additionally, surface samples were rich in lignin-like compounds of plant origin that were absent with depth. Soil OM 14C and mean turnover times were variable across replicate horizons, ranging from 3-1500 years at the surface, to 5000-40,000 years at depth. In comparison to temperate deciduous forests, these 14C values reflect far older soil C. Particulate organic matter (free light fraction), with a relatively modern 14C was found in low but measureable concentration in even the deepest soil horizons. Our results indicate these tropical subsoils contain small but metabolically active microbial communities that are highly OM limited and may persist via degradation of recent inputs.

Sources and fate of sediment organic matter in Asia's largest brackish water lagoon and nearby mangrove ecosystem

NASA Astrophysics Data System (ADS)

Mukherjee, R.; Muduli, P. R.; Barik, S.; Kumar, S.

2017-12-01

Coastal lagoons and mangrove ecosystems regularly undergo natural (tidal) and anthropogenic (riverine inputs) forcings. After effects of these forcings cause coastal environments to sustain high biological production leading to high suspended organic matter (OM) and hence fast sedimentation and accumulation of OM in sediments.The different sources of OM and its burial in tropical lacustrine and mangrove systems have been rarely studied in detail with a few reports from Indian estuaries. The present study attempts to understand the sources and fate organic matter at two Ramsar sites, viz. Chilika Lake (Asia's largest brackish water lagoon) and nearby Bhitarkanika mangroves, located in the east coast of India. We measured nitrogen and carbon content (% N and % C) and isotopic composition (δ13Corg and δ15N) of OM at different depths in eight and three sediment cores collected from the Chilika lagoon and Bhitarkanika mangroves, respectively. Overall, the mean δ13Corg and % C in the lagoon were ‒21.10 ± 0.79 ‰ and 0.84 ± 0.47 %, respectively; whereas the same for mangrove cores were ‒24.56 ± 0.80 ‰ and 1.04 ± 0.26 %, respectively. Similarly, average δ15N and % N in the lagoon cores were 4.15 ± 0.63 ‰ and 0.11 ± 0.05 %, respectively; for mangrove cores the values were 4.28 ± 0.50 ‰ and 0.07 ± 0.01 %, respectively. Preliminary analysis of the isotopic composition (δ13Corg and δ15N) and elemental ratios indicates that organic carbon in the sediment at Bhitarkanika mangrove was of terrigenous, marine and in situ origin, whereas cores of Chilika lagoon showed predominantly marine signature. No relationship between δ13Corg of suspended and sediment in the Chilika lagoon indicates these two organic pools to be not directly coupled. End member mixing model in the mangrove ecosystem indicate on an average 50 % terrestrial contribution to the OM pool.

Influence of Collector Surface Composition and Water Chemistry on the Deposition of Cerium Dioxide Nanoparticles: QCM-D and Column Experiment Approaches

EPA Science Inventory

The deposition behavior of cerium dioxide (CeO2) nanoparticles (NPs) in dilute NaCl solutions was investigated as a function of collector surface composition, pH, ionic strength, and organic matter (OM). Sensors coated separately with silica, iron oxide, and alumina were applied ...

Why is Mineral-Associated Organic Matter Enriched in 15N? Evidence from Grazed Pasture Soil

NASA Astrophysics Data System (ADS)

Baisden, W. T.; Wells, N. S.; Mudge, P. L.; Clough, T. J.; Schipper, L. A.; Ghani, A.; Stevenson, B.

2014-12-01

Throughout the scientific literature, measurements across soil depth and density fractions suggest that, with few exceptions, mineral-associated organic matter (OM) has higher δ15N than non-mineral-associated OM. This implies that the δ15N difference between N inputs and mineral-stabilized OM may characterize the microbial processes involved in stabilization and mineral association. Yet current understanding of observed N isotope fractionation in terrestrial ecosystems suggests the large isotope effects are expressed during inorganic N transformations from NH4 to gaseous loss pathways of NH3 volatilization and denitrification. How can the relative importance of N isotope fractionation during OM stabilization versus loss pathways be resolved? We recently examined N isofluxes when a temporary nitrogen excess is created by urine deposition in a New Zealand dairy pasture. We found that the N isotopic composition of volatilized NH3, and NO3 available for leaching or denitrification could not be linked back to the added N using Rayleigh distillation models. Instead, the results imply that the added N was immobilized, and the N available for losses was increasingly derived from mineralization of organic matter during the course of the experiment. These results are consistent with recent evidence of enhanced OM mineralization in urine patches, understanding of N isotope mass balances and long-standing evidence that gross mineralization and immobilization fluxes greatly exceed net mineralization and nitrification, except at very high N saturation. These results suggest that where 15N enrichment occurs due to fractionating loss pathways, the isotope effects are primarily transmitted to immobilized N, forming 15N enriched stabilized OM. This further explains earlier findings that the δ15N of soil OM represents an integrated indicator of losses, reflecting the intensity and duration of pastoral agriculture. We suggest that development of an indicator based on δ15N in mineral-associated OM might relate mineralization rates to the δ15N of stabilized or immobilized N.

Spatial distribution of heterocyclic organic matter compounds at macropore surfaces in Bt-horizons

NASA Astrophysics Data System (ADS)

Leue, Martin; Eckhardt, Kai-Uwe; Gerke, Horst H.; Ellerbrock, Ruth H.; Leinweber, Peter

2017-04-01

The illuvial Bt-horizon of Luvisols is characterized by coatings of clay and organic matter (OM) at the surfaces of cracks, biopores and inter-aggregate spaces. The OM composition of the coatings that originate from preferential transport of suspended matter in macropores determines the physico-chemical properties of the macropore surfaces. The analysis of the spatial distribution of specific OM components such as heterocyclic N-compounds (NCOMP) and benzonitrile and naphthalene (BN+NA) could enlighten the effect of macropore coatings on the transport of colloids and reactive solutes during preferential flow and on OM turnover processes in subsoils. The objective was to characterize the mm-to-cm scale spatial distribution of NCOMP and BN+NA at intact macropore surfaces from the Bt-horizons of two Luvisols developed on loess and glacial till. In material manually separated from macropore surfaces the proportions of NCOMP and BN+NA were determined by pyrolysis-field ionization mass spectrometry (Py-FIMS). These OM compounds, likely originating from combustion residues, were found increased in crack coatings and pinhole fillings but decreased in biopore walls (worm burrows and root channels). The Py-FIMS data were correlated with signals from C=O and C=C groups and with signals from O-H groups of clay minerals as determined by Fourier transform infrared spectroscopy in diffuse reflectance mode (DRIFT). Intensive signals of C15 to C17 alkanes from long-chain alkenes as main components of diesel and diesel exhaust particulates substantiated the assumption that burning residues were prominent in the subsoil OM. The spatial distribution of NCOMP and BN+NA along the macropores was predicted by partial least squares regression (PLSR) using DRIFT mapping spectra from intact surfaces and was found closely related to the distribution of crack coatings and pinholes. The results emphasize the importance of clay coatings in the subsoil to OM sorption and stabilization. Differences between biopores and cracks suggest differences in the mass transport and OM turnover between these macropore types in Luvisols.

From hilltop to kettle hole: what trends across the terrestrial-aquatic transition zone are revealed by organic matter stable isotope (δ13C and δ15N) composition?

NASA Astrophysics Data System (ADS)

Kayler, Z. E.; Nitzsche, K. N.; Gessler, A.; Kaiser, M. L.; Hoffmann, C.; Premke, K.; Ellerbrock, R.

2016-12-01

Steep environmental gradients develop across the interface between terrestrial and aquatic domains that influence organic matter (OM) retention. In NE Germany, kettle holes are small water bodies found in high density across managed landscapes. Kettle hole water budgets are generally fed through precipitation and overland flow and are temporarily connected to groundwater resulting in distinct hydroperiods. We took advantage of the range of environmental conditions created by the fluctuating shoreline to investigate patterns of OM stability along transects spanning from hilltops to sediments within a single kettle hole. We physically and chemically separated OM fractions that are expected to be loosely bound, such as particulate organic matter, to those that are tightly bound, such as OM associated with mineral or metal surfaces. The study design allowed us to investigate stabilization processes at the aggregate, transect, and kettle hole catchment scale. At the aggregate scale, we analyzed soil characteristics (texture, pH, extractable Al, Fe, Ca) to contribute to our understanding of OM stabilization. At the transect scale, we compared isotopic trends in the different fractions against a simple Rayleigh distillation model to infer disruption of the transfer of material, for example erosion, by land management such as tillage or the addition of OM through fertilization. At the kettle hole catchment scale, we correlated our findings with plant productivity, landform properties, and soil wetness proxies. Aggregate scale patterns of OM 13C and 15N were fraction dependent; however, we observed a convergence in isotopic patterns with soil properties from OM of more stabilized fractions. At the transect scale, loosely bound fractions did not conform to the simple model, suggesting these fractions are more dynamic and influenced by land management. The stabilized fractions did follow the Rayleigh model, which implies that transfer processes play a larger role in these fractions. At the kettle hole catchment scale, we found that the terrestrial-aquatic transition zone and other areas with high soil moisture correlated with isotopic patterns of the OM fractions. Kettle hole sediment OM fraction patterns were consistently different despite receiving substantial material from the surrounding landscape.

Geochemical characterisation of Tithonian-Berriasian Chia Gara organic-rich rocks in northern Iraq with an emphasis on organic matter enrichment and the relationship to the bioproductivity and anoxia conditions

NASA Astrophysics Data System (ADS)

Mohialdeen, Ibrahim M. J.; Hakimi, Mohammed Hail

2016-02-01

Tithonian-Berriasian Chia Gara organic-rich rocks, located in Kurdistan (northern Iraq), were analysed based on inorganic and organic geochemistry to define the origin, type of organic matter, and the influencing factors of organic matter (OM) enrichment, including the OM input and preservation, and their relationship to the paleoenvironment conditions. The δ13Corg values of the Chia Gara rocks range from -29.99‰ to -26.93‰, with average values of approximately -28.8‰, indicating that the organic matter has a predominantly marine origin. Enhanced biological productivity within the photic zone of the water column during deposition of the Chia Gara Fm. is indicated by consistently high organic carbon content in most samples (average 3 wt.%), as well as by bulk geochemical and biomarker characteristics. Major contributions by aquatic algae and microorganisms with a minor terrigenous organic matter contribution are indicated by the n-alkane distribution patterns and the composition of the hopanoids, steroids, and tricyclic terpenoids. Strongly reducing bottom water is indicated by low pristane/phytane ratios, homohopane distribution patterns, and the redox-sensitive trace elements geochemistry. Salinity stratification with alkaline bottom waters is indicated by high Sr/Ba ratios and the presence of gammacerane in the analysed Chia Gara samples. These data indicate that OM enrichment in the Tithonian-Berriasian Chia Gara rocks results from the combination of enhanced biological productivity and salinity stratification with anoxic bottom water conditions, which favoured OM preservation.

Influence of long-term land use (arable and forest) and soil mineralogy on organic carbon stocks as well as composition and stability of soil organic matter

NASA Astrophysics Data System (ADS)

Kaiser, M.; Ellerbrock, R. H.; Wulf, M.; Dultz, S.; Hierath, C.; Sommer, M.

2009-04-01

The function of soils to sequester organic carbon (OC) and their related potential to mitigate the greenhouse effect is strongly affected by land use and soil mineralogy. This study is aimed to clarify long-term impacts of arable and forest land use as well as soil mineralogy on topsoil soil organic carbon (SOC) stocks as well as soil organic matter (SOM) composition and stability. Topsoil samples were taken from deciduous forest and adjacent arable sites (within Germany) that are continuously used for more than 100 years. The soils are different in genesis (Albic and Haplic Luvisol (AL, HL), Colluvic and Haplic Regosol (CR, HR), Haplic and Vertic Cambisol (HC, VC), Haplic Stagnosol (HSt)). First, particulate and water soluble organic matter were separated from the topsoil samples (Ap and Ah horizons). From the remaining solid extraction residues the Na-pyrophosphate soluble organic matter fractions (OM(PY)) were extracted, analysed for its OC content (OC(PY)) and characterized by FTIR spectroscopy and 14C analyses. The SOC stocks calculated for 0-40 cm depth are in general larger for the forest as compared to the adjacent arable soils (except VC). The largest difference between forest and arable topsoils was detected for the HR site (5.9 kg m-2) and seemed to be caused by a two times larger stock of exchangeable Ca of the forest topsoil. For the arable topsoils multiple regression analyses indicate a strong influence of clay, oxalate soluble Al and pyrophosphate soluble Mg on the content of OC(PY) weighted with its C=O content. Such relation is not found for the forest topsoils. Further, a positive relation between Δ14C values of OM(PY) and the following independent variables: (i) specific mineral surface area, (ii) relative C=O group content in OM(PY) and (iii) soil pH is found for the arable topsoils (pH 6.7 - 7.5) suggesting an increase in OM(PY) stability with increasing interactions between OM(PY) and soil mineral surfaces via cation bridging. A similar relation is found for the forest topsoils (pH < 5) if the specific mineral surface area is excluded from the multiple regression. This finding and the higher OC(PY) content of the forest topsoils suggest that in these soils the OM(PY) components are mainly cross-linked by cations and did not interact with mineral surfaces. We assume cross-linking to be less effective for OM stabilization as compared to cation bridging with mineral surfaces since Δ14C data indicate the OM(PY) from the forest topsoils to be less stable than that from arable topsoils.

Wood source and pyrolysis temperature interact to control PyOM degradation rates

NASA Astrophysics Data System (ADS)

Bird, J. A.; Hatton, P. J.; Filley, T. R.; Chatterjee, S.; Auclerc, A.; Gormley, M.; Dastmalchi, K.; Stark, R. E.; Nadelhoffer, K. J.

2015-12-01

Surprisingly little is known about how shifts in tree species composition and increased forest fire frequency and intensity will affect one of the most stable pools of soil organic matter, i.e. the pyrogenic organic matter (PyOM or char). In a previous study, we showed that wood source and pyrolysis temperature interact to control PyOM structure and potential reactivity for two tree species common in high-latitude forests, jack pine (JP) and red maple (RM). Here, we investigate whether these differences affect PyOM turnover by examining the fates of 13C/15N-enriched JP wood and PyOM pyrolyzed at 300 (JP300) and 450 °C (JP450) and RM pyrolyzed at 450 °C (RM450). The substrates were applied 1-3 cm below the O/A interface of a well-drained Spodosol in a long-term forest fire study located at the University of Michigan Biological Station (Pellston, MI, USA). 13C-CO2effluxes from the first 996 days of decay showed a significant wood source by pyrolysis temperature interaction on PyOM field mineralisation rates, with RM450 mineralising twice faster than JP450 during the first 90 days. Increasing pyrolysis temperature substantially decreased field mineralization rates during the first 996 days, with mineralisation rates 24 and 80 times slower for JP300 and JP450 compared with JP wood. After 1 year, (i) bacterial groups were large sinks for PyOM-derived C as pyrolysis temperature increased and as substrate use efficiency decreased; (ii) potential phenol oxidase and net peroxidase activities were unaffected by the PyOM addition, although net peroxidase activities measured tended to lesser for soils amended with JP450 and RM450; and (iii) Collembola detritivores appeared less likely to be found for soils amended with JP450 and RM450. PyOM-derived C and N recoveries did not differ after 1 year; we will present 3-y recovery data. Our results suggest that the composition of angiosperms (e.g. RM) and gymnosperms (e.g. JP) in high-latitude forests is an underappreciated but essential determinant of soil PyOM stocks and reactivity, with angiosperms yielding more degradable PyOM. Considering the wood source by pyrolysis temperature interaction on PyOM will help providing more comprehensive large-scale assessments of PyOM stocks and reactivity potentials under current and future climate conditions.

Organic matter quantity and source affects microbial community structure and function following volcanic eruption on Kasatochi Island, Alaska.

PubMed

Zeglin, Lydia H; Wang, Bronwen; Waythomas, Christopher; Rainey, Frederick; Talbot, Sandra L

2016-01-01

In August 2008, Kasatochi volcano erupted and buried a small island in pyroclastic deposits and fine ash; since then, microbes, plants and birds have begun to re-colonize the initially sterile surface. Five years post-eruption, bacterial 16S rRNA gene and fungal internal transcribed spacer (ITS) copy numbers and extracellular enzyme activity (EEA) potentials were one to two orders of magnitude greater in pyroclastic materials with organic matter (OM) inputs relative to those without, despite minimal accumulation of OM (< 0.2%C). When normalized by OM levels, post-eruptive surfaces with OM inputs had the highest β-glucosidase, phosphatase, NAGase and cellobiohydrolase activities, and had microbial population sizes approaching those in reference soils. In contrast, the strongest factor determining bacterial community composition was the dominance of plants versus birds as OM input vectors. Although soil pH ranged from 3.9 to 7.0, and %C ranged 100×, differentiation between plant- and bird-associated microbial communities suggested that cell dispersal or nutrient availability are more likely drivers of assembly than pH or OM content. This study exemplifies the complex relationship between microbial cell dispersal, soil geochemistry, and microbial structure and function; and illustrates the potential for soil microbiota to be resilient to disturbance. © 2015 Society for Applied Microbiology and John Wiley & Sons Ltd.

An initial investigation into the organic matter biogeochemistry of the Congo River

USGS Publications Warehouse

Spencer, Robert G.M.; Hernes, Peter J.; Aufdenkampe, Anthony K.; Baker, Andy; Gulliver, Pauline; Stubbins, Aron; Aiken, George R.; Dyda, Rachael Y.; Butler, Kenna D.; Mwamba, Vincent L.; Mangangu, Arthur M.; Wabakanghanzi, Jose N.; Six, Johan

2012-01-01

The Congo River, which drains pristine tropical forest and savannah and is the second largest exporter of terrestrial carbon to the ocean, was sampled in early 2008 to investigate organic matter (OM) dynamics in this historically understudied river basin. We examined the elemental (%OC, %N, C:N), isotopic (δ13C, Δ14C, δ15N) and biochemical composition (lignin phenols) of coarse particulate (>63 μm; CPOM) and fine particulate (0.7–63 μm; FPOM) OM and DOC, δ13C, Δ14C and lignin phenol composition with respect to dissolved OM (14C = -62.2 ± -13.2‰, n = 5) compared to CPOM and DOM (mean Δ14C = 55.7 ± 30.6‰, n = 4 and 73.4 ± 16.1‰, n = 5 respectively). The modern radiocarbon ages for DOM belie a degraded lignin compositional signature (i.e. elevated acid:aldehyde ratios (Ad:Al) relative to CPOM and FPOM), and indicate that the application of OM degradation patterns derived from particulate phase studies to dissolved samples needs to be reassessed: these elevated ratios are likely attributable to fractionation processes during solubilization of plant material. The relatively low DOM carbon-normalized lignin yields (Λ8; 0.67–1.12 (mg(100 mg OC)-1)) could also reflect fractionation processes, however, they have also been interpreted as an indication of significant microbial or algal sources of DOM. CPOM appears to be well preserved higher vascular plant material as evidenced by its modern radiocarbon age, elevated C:N (17.2–27.1) and Λ8 values (4.56–7.59 (mg(100 mg OC)-1)). In relation to CPOM, the aged FPOM fraction (320–580 ybp 14C ages) was comparatively degraded, as demonstrated by its nitrogen enrichment (C:N 11.4–14.3), lower Λ8 (2.80–4.31 (mg(100 mg OC)-1)) and elevated lignin Ad:Al values similar to soil derived OM. In this study we observed little modification of the OM signature from sample sites near the cities of Brazzaville and Kinshasa to the head of the estuary (~350 km) highlighting the potential for future studies to assess seasonal and long-term OM dynamics from this logistically feasible location and derive relevant information with respect to OM exported to the Atlantic Ocean. The relative lack of OM data for the Congo River Basin highlights the importance of studies such as this for establishing baselines upon which to gauge future change.

Solid-state 13C NMR experiments reveal effects of aggregate size on the chemical composition of particulate organic matter in grazed steppe soils

NASA Astrophysics Data System (ADS)

Steffens, M.; Kölbl, A.; Kögel-Knabner, I.

2009-04-01

Grazing is one of the most important factors that may reduce soil organic matter (SOM) stocks and subsequently deteriorate aggregate stability in grassland topsoils. Land use management and grazing reduction are assumed to increase the input of OM, improve the soil aggregation and change species composition of vegetation (changes depth of OM input). Many studies have evaluated the impact of grazing cessation on SOM quantity. But until today little is known about the impact of grazing cessation on the chemical quality of SOM in density fractions, aggregate size classes and different horizons. The central aim of this study was to analyse the quality of SOM fractions in differently sized aggregates and horizons as affected by increased inputs of organic matter due to grazing exclusion. We applied a combined aggregate size, density and particle size fractionation procedure to sandy steppe topsoils with different organic matter inputs due to different grazing intensities (continuously grazed = Cg, winter grazing = Wg, ungrazed since 1999 = Ug99, ungrazed since 1979 = Ug79). Three different particulate organic matter (POM; free POM, in aggregate occluded POM and small in aggregate occluded POM) and seven mineral-associated organic matter fractions were separated for each of three aggregate size classes (coarse = 2000-6300 m, medium = 630-2000 m and fine =

How do natural, uncultivated microbes interact with organic matter? Insights from single cell genomics and metagenomics

NASA Astrophysics Data System (ADS)

Lloyd, K. G.; Bird, J.; Schreiber, L.; Petersen, D.; Kjeldsen, K.; Schramm, A.; Stepanauskas, R.; Jørgensen, B. B.

2013-12-01

Since most of the microbes in marine sediments remain uncultured, little is known about the mechanisms by which these natural communities degrade organic matter (OM). Likewise, little is known about the make-up of labile OM in marine sediments beyond general functional classes such as proteins, carbohydrates, and lipids, measured as monomers. However, microbes have complex interactions with specific polymers within these functional classes, which can be indicated by a microbe's enzymatic toolkit. We found that four single cell genomes of archaea have very different peptidase compositions than four single cells of bacteria, suggesting that archaea and bacteria may play different roles in OM degradation. We also found that predicted extracellular cysteine peptidases, which require chemically reducing conditions, were common in IMG database metagenomes from marine sediments, and absent in those from seawater. This suggests that the pathways, and not just the rates, of OM degradation may differ between seawater and sediments. By comparing enzyme classes in different organisms, or in different types of marine environments, we present an emerging view of the microbial potential for specific carbon remineralization pathways in marine sediments. In addition, the methods we present hold promise for characterizing OM degradation in any environment where genomic information is available.

Linking variations in sea spray aerosol particle hygroscopicity to composition during two microcosm experiments

NASA Astrophysics Data System (ADS)

Forestieri, Sara D.; Cornwell, Gavin C.; Helgestad, Taylor M.; Moore, Kathryn A.; Lee, Christopher; Novak, Gordon A.; Sultana, Camille M.; Wang, Xiaofei; Bertram, Timothy H.; Prather, Kimberly A.; Cappa, Christopher D.

2016-07-01

The extent to which water uptake influences the light scattering ability of marine sea spray aerosol (SSA) particles depends critically on SSA chemical composition. The organic fraction of SSA can increase during phytoplankton blooms, decreasing the salt content and therefore the hygroscopicity of the particles. In this study, subsaturated hygroscopic growth factors at 85 % relative humidity (GF(85 %)) of predominately submicron SSA particles were quantified during two induced phytoplankton blooms in marine aerosol reference tanks (MARTs). One MART was illuminated with fluorescent lights and the other was illuminated with sunlight, referred to as the "indoor" and "outdoor" MARTs, respectively. Optically weighted GF(85 %) values for SSA particles were derived from measurements of light scattering and particle size distributions. The mean optically weighted SSA diameters were 530 and 570 nm for the indoor and outdoor MARTs, respectively. The GF(85 %) measurements were made concurrently with online particle composition measurements, including bulk composition (using an Aerodyne high-resolution aerosol mass spectrometer) and single particle (using an aerosol time-of-flight mass spectrometer) measurement, and a variety of water-composition measurements. During both microcosm experiments, the observed optically weighted GF(85 %) values were depressed substantially relative to pure inorganic sea salt by 5 to 15 %. There was also a time lag between GF(85 %) depression and the peak chlorophyll a (Chl a) concentrations by either 1 (indoor MART) or 3-to-6 (outdoor MART) days. The fraction of organic matter in the SSA particles generally increased after the Chl a peaked, also with a time lag, and ranged from about 0.25 to 0.5 by volume. The observed depression in the GF(85 %) values (relative to pure sea salt) is consistent with the large observed volume fractions of non-refractory organic matter (NR-OM) comprising the SSA. The GF(85 %) values exhibited a reasonable negative correlation with the SSA NR-OM volume fractions after the peak of the blooms (i.e., Chl a maxima); i.e., the GF(85 %) values generally decreased when the NR-OM volume fractions increased. The GF(85 %) vs. NR-OM volume fraction relationship was interpreted using the Zdanovskii-Stokes-Robinson (ZSR) mixing rule and used to estimate the GF(85 %) of the organic matter in the nascent SSA. The estimated pure NR-OM GF(85 %) values were 1.16 ± 0.09 and 1.23 ± 0.10 for the indoor and outdoor MARTS, respectively. These measurements demonstrate a clear relationship between SSA particle composition and the sensitivity of light scattering to variations in relative humidity. The implications of these observations to the direct climate effects of SSA particles are discussed.

Sorptive fractionation of organic matter and formation of organo-hydroxy-aluminum complexes during litter biodegradation in the presence of gibbsite

Treesearch

K. Heckman; A.S. Grandy; X. Gao; M. Keiluweit; K. Wickings; K. Carpenter; J. Chorover; C. Rasmussen

2013-01-01

Solid and aqueous phase Al species are recognized to affect organic matter (OM) stabilization in forest soils. However, little is known about the dynamics of formation, composition and dissolution of organo-Al hydroxide complexes in microbially-active soil systems, where plant litter is subject to microbial decomposition in close proximity to mineral weathering...

Spatio-temporal variations of organic matter along the Seine estuary (France)

NASA Astrophysics Data System (ADS)

Thibault, Alexandre; Huguet, Arnaud; Parlanti, Edith; Derenne, Sylvie

2017-04-01

Organic matter (OM) in aquatic systems plays an important role in water quality and biogeochemical processes. It is thus essential to characterize OM, especially in estuaries which are the place of the transport and the reactivity of natural and anthropogenic compounds. However, the characterization of OM in estuaries is complex due to its heterogeneity and variability in addition to specific features of these environments (salinity, turbidity…). Two types of aquatic OM, namely particulate (POM) and dissolved (DOM) are commonly distinguished by filtration. Due to its low concentration in estuaries (few mg/L), DOM has to be concentrated prior to its molecular (or structural) analysis. However, this step also induces the concentration of salts which are predominant (several g/L) in coastal environments. To overcome this issue, DOM has been isolated by a combination of reverse osmosis and electrodialysis. This method is more efficient than classical ones (ultrafiltration, solid phase techniques) in the isolation of representative DOM material. As a result, DOM can be characterized just as POM and sedimentary OM. The aim of this study is to characterize the spatiotemporal variability of DOM, POM and sedimentary OM along the Seine estuary (France) so as to understand its role in the functioning of this ecosystem. To this end, 5 sampling campaigns were performed in the Seine estuary between January 2015 and April 2016, during which large water samples (100 L) and sediment cores (10 cm) were collected. These campaigns covered the whole estuary. The three OM pools were analyzed through (i) elemental and isotopic analyses (Elemental Analysis-isotope ratio Mass Spectrometry, 14C ages) and (ii) structural analyses (13C solid state nuclear magnetic resonance, pyrolysis coupled with gas chromatography and mass spectrometry and ultrahigh resolution mass spectrometry), allowing to obtain both bulk and molecular information. The combination of these chemical characterization and statistical analyses shows that the 2 main factors driving the composition of OM in the Seine estuary are the OM pool (DOM, POM or sedimentary) and its origin (marine vs freshwater) whereas seasonal variations appear less pronounced. Indeed, OM exhibits higher C/N ratio and is richer in aliphatic and alkoxyl carbons than POM and sedimentary OM. The latter share the same elemental and isotopic composition but POM is enriched in aliphatic carbons with respect to sedimentary OM. These results confirm the higher hydrophilic nature of DOM when compared to POM and that the sedimentary OM in the Seine estuary is close to POM. Moreover, the dating of OM shows that DOM and POM are recent (> 1950 AD) contrary to sedimentary OM. When going downstream along the estuary, DOM is depleted in aliphatic carbons and enriched in alkoxyl carbons, the reverse trend being observed for POM. Both are enriched in δ13C.

Alteration of organic matter during infaunal polychaete gut passage and links to sediment organic geochemistry. Part II: Fatty acids and aldoses

NASA Astrophysics Data System (ADS)

Woulds, Clare; Middelburg, Jack J.; Cowie, Greg L.

2014-07-01

The activities of sediment-dwelling fauna are known to influence the rates of and pathways through which organic matter is cycled in marine sediments, and thus to influence eventual organic carbon burial or decay. However, due to methodological constraints, the role of faunal gut passage in determining the subsequent composition and thus degradability of organic matter is relatively little studied. Previous studies of organic matter digestion by benthic fauna have been unable to detect uptake and retention of specific biochemicals in faunal tissues, and have been of durations too short to fit digestion into the context of longer-term sedimentary degradation processes. Therefore this study aimed to investigate the aldose and fatty acid compositional alterations occurring to organic matter during gut passage by the abundant and ubiquitous polychaetes Hediste diversicolor and Arenicola marina, and to link these to longer-term changes typically observed during organic matter decay. This aim was approached through microcosm experiments in which selected polychaetes were fed with 13C-labelled algal detritus, and organisms, sediments, and faecal pellets were sampled at three timepoints over ∼6 weeks. Samples were analysed for their 13C-labelled aldose and fatty acid contents using GC-MS and GC-IRMS. Compound-selective net accumulation of biochemicals in polychaete tissues was observed for both aldoses and fatty acids, and the patterns of this were taxon-specific. The dominant patterns included an overall loss of glucose and polyunsaturated fatty acids; and preferential preservation or production of arabinose, microbial compounds (rhamnose, fucose and microbial fatty acids), and animal-synthesised fatty acids. These patterns may have been driven by fatty acid essentiality, preferential metabolism of glucose, and A. marina grazing on bacteria. Fatty acid suites in sediments from faunated microcosms showed greater proportions of saturated fatty acids and bacterial markers than those from afaunal controls. Aldose suite alterations were similar in faunated microcosms and afaunal controls, however the impact of faunal gut passage on sedimentary aldose compositions may be observable over longer timescales. Therefore this study provides direct evidence that polychaete gut passage influences OM composition both through taxon-specific selective assimilation and retention in polychaete tissues, and also through interactions with the microbial community. Polychaete gut passage will result in selective loss, preservation, and retention in polychaete tissues of specific aldoses and fatty acids. The pattern of selectivity will be taxon specific. Changes observed during gut passage will align with those commonly observed during OM decay, thus indicating that macrofaunal gut passage is one of the factors controlling sedimentary OM composition. Together with a previous publication reporting amino acid data from the same experiments (Woulds et al., 2012), this study represents the most complete description of OM alteration during gut passage that is available to date.

Preservation of labile organic matter in soils of drained thaw lakes in Northern Alaska

NASA Astrophysics Data System (ADS)

Mueller, Carsten W.; Rethemeyer, Janet; Kao-Kniffin, Jenny; Löppmann, Sebastian; Hinkel, Kenneth; Bockheim, James

2014-05-01

A large number of studies predict changing organic matter (OM) dynamics in arctic soils due to global warming. In contrast to rather slowly altering bulk soil properties, single soil organic matter (SOM) fractions can provide a more detailed picture of the dynamics of differently preserved SOM pools in climate sensitive arctic regions. By the study of the chemical composition of such distinctive SOM fractions using nuclear magnetic resonance spectroscopy (NMR) together with radiocarbon analyses it is possible to evaluate the stability of the major OM pools. Approximately 50-75% of Alaska's Arctic Coastal Plain is covered with thaw lakes and drained thaw lakes that follow a 5,000 yr cycle of development (between creation and final drainage), thus forming a natural soil chronosequence. The drained thaw lakes offer the possibility to study SOM dynamics affected by permafrost processes over millennial timescales. In April 2010 we sampled 16 soil cores (including the active and permanent layer) reaching from young drained lakes (0-50 years since drainage) to ancient drained lakes (3000-5500 years since drainage). Air dried soil samples from soil horizons of the active and permanent layer were subjected to density fractionation in order to differentiate particulate OM and mineral associated OM. The chemical composition of the SOM fractions was analyzed by 13C CPMAS NMR spectroscopy. For a soil core of a young and an ancient drained thaw lake basin we also analyzed the 14C content. For the studied soils we can show that up to over 25 kg OC per square meter are stored mostly as labile, easily degradable organic matter rich in carbohydrates. In contrast only 10 kg OC per square meter were sequestered as presumably more stable mineral associated OC dominated by aliphatic compounds. Comparable to soils of temperate regions, we found small POM (< 20 µm) occluded in aggregated soil structures which differed in the chemical composition from larger organic particles. This was clearly shown by increased amounts of aliphatic C in these small POM fractions. As revealed by 13C CPMAS NMR, with advancing soil age increasing aliphaticity was also detected in occluded small POM fractions. By 14C dating we could show the stabilization of younger more labile OM at greater depth in buried O horizons. Additionally the study of the microscale elemental distributions, using nano-scale secondary ion mass spectrometry (NanoSIMS) showed the initial formation of aggregates and organo-mineral interfaces in the studied permafrost soils.

The sedimentary organic matter from a Lake Ichkeul core (far northern Tunisia): Rock-Eval and biomarker approach

NASA Astrophysics Data System (ADS)

Affouri, Hassène; Sahraoui, Olfa

2017-05-01

The vertical distributions of bulk and molecular biomarker composition in samples from a ca. 156 cm sediment core from Lake Ichkeul were determined. Bulk analysis (Rock-Eval pyrolysis, carbonate, lipid extraction) and molecular analysis of saturated fractions were used to characterize the nature, preservation conditions and input of sedimentary organic matter (OM) to this sub-wet lake environment. The sediments are represented mainly by gray-black silty-clay facies where the carbonate (CaCO3) content varies in a range of 10-30% dry sediment. Rock-Eval pyrolysis revealed a homogeneous total organic carbon (TOC) content of ca. 1% sediment, but with down core fluctuation, indicating different anoxic conditions at different depths and material source variation. The values show three periods of relative enrichment, exceeding ca. 1%, at 146-134 cm, 82 cm and 14-0 cm depth. The low Hydrogen Index (HI) values [<119 mg hydrocarbon (HC)/g TOC)] were characteristic of continental Type III OM. The Tmax values in the range 415-420 °C were characteristic of immature OM at an early diagenetic stage. The distributions of n-alkanes (C17 to C34), isoprenoid (iso) alkanes (pristane and phytane), terpanes and steranes showed that the OM is a mixture of marine algal and bacterial source and emergent and floating higher plant origin. In addition, the distributions, as well as several biomarker ratios (n-alkanes, iso-alkanes/n-alkanes), showed that the OM is a mixture of immature and mature. Significant downcore fluctuation was observed in the molecular composition. This indicates intense microbial activity below ca. 50 cm core depth under an anoxic and brackish environment.

Effects of organic matter fraction and compositional changes on distribution of cadmium and zinc in long-term polluted paddy soils.

PubMed

Zhou, Tong; Wu, Longhua; Luo, Yongming; Christie, Peter

2018-01-01

Soil particulate organic matter (POM) has rapid turnover and metal enrichment, but the interactions between organic matter (OM) and metals have not been well studied. The present study aimed to investigate changes in the OM concentration and composition of the POM fraction and their corresponding effects on metal distribution and extractability in long-term polluted paddy soils. Soil 2000-53 μm POM size fractions had higher contents of C-H and C=O bonds, C-H/C=O ratios and concentrations of fulvic acid (FA), humic acid (HA), cadmium (Cd) and zinc (Zn) than the bulk soils. Cadmium and Zn stocks in soil POM fractions were 24.5-27.9% and 7.12-16.7%, respectively, and were more readily EDTA-extractable. Compared with the control soil, the 2000-250 μm POM size fractions had higher organic carbon concentrations and C/N ratios in the polluted soils. However, there were no significant differences in the contents in C-H and C=O bonds or C-H/C=O ratios of POM fractions among the control, slightly and highly polluted soils. In accordance with the lower contents of C=O bonds and FA and HA concentrations, the Cd and Zn concentrations in 250-53 μm POM size fractions were lower than those in 2000-250 μm POM size fractions. Enrichment of Cd in POM fractions increased with increasing soil pollution level. These results support the view that changes in the OM concentration and the size and composition of POM fractions play a key role in determining the distribution of Cd and Zn in paddy soils. Copyright © 2017. Published by Elsevier Ltd.

Particulate Organic Matter Distribution along the Lower Amazon River: Addressing Aquatic Ecology Concepts Using Fatty Acids

PubMed Central

Mortillaro, Jean-Michel; Rigal, François; Rybarczyk, Hervé; Bernardes, Marcelo; Abril, Gwenaël; Meziane, Tarik

2012-01-01

One of the greatest challenges in understanding the Amazon basin functioning is to ascertain the role played by floodplains in the organic matter (OM) cycle, crucial for a large spectrum of ecological mechanisms. Fatty acids (FAs) were combined with environmental descriptors and analyzed through multivariate and spatial tools (asymmetric eigenvector maps, AEM and principal coordinates of neighbor matrices, PCNM). This challenge allowed investigating the distribution of suspended particulate organic matter (SPOM), in order to trace its seasonal origin and quality, along a 800 km section of the Amazon river-floodplain system. Statistical analysis confirmed that large amounts of saturated FAs (15:0, 18:0, 24:0, 25:0 and 26:0), an indication of refractory OM, were concomitantly recorded with high pCO2 in rivers, during the high water season (HW). Contrastingly, FAs marker which may be attributed in this ecosystem to aquatic plants (18:2ω6 and 18:3ω3) and cyanobacteria (16:1ω7), were correlated with higher O2, chlorophyll a and pheopigments in floodplains, due to a high primary production during low waters (LW). Decreasing concentrations of unsaturated FAs, that characterize labile OM, were recorded during HW, from upstream to downstream. Furthermore, using PCNM and AEM spatial methods, FAs compositions of SPOM displayed an upstream-downstream gradient during HW, which was attributed to OM retention and the extent of flooded forest in floodplains. Discrimination of OM quality between the Amazon River and floodplains corroborate higher autotrophic production in the latter and transfer of OM to rivers at LW season. Together, these gradients demonstrate the validity of FAs as predictors of spatial and temporal changes in OM quality. These spatial and temporal trends are explained by 1) downstream change in landscape morphology as predicted by the River Continuum Concept; 2) enhanced primary production during LW when the water level decreased and its residence time increased as predicted by the Flood Pulse Concept. PMID:23029412

Characterization of Organic Matter Sources within a Matrix of Land Use in Northeast Utah

NASA Astrophysics Data System (ADS)

Kelso, J. E.; Baker, M. A.

2017-12-01

Dynamics of organic matter (OM) sources in natural aquatic systems have been studied for decades, but urban studies have revealed additional, less studied, OM sources such as stormwater, lawn clippings, and wastewater effluent. Traditionally the OM pool in freshwater systems has been defined as a homogenous pool of varying size classes: course particulate, fine particulate and dissolved OM. Our goal was to identify and quantify the composition of fine particulate OM (FPOM), and dissolved OM (DOM) as derived from autochthonous, terrestrial, and potential anthropogenic sources. We hypothesized anthropogenic changes in land use have increased the proportion of autochthonous sources of OM. We sampled OM at 33 sites in four watersheds in northeast Utah that encompass a range of land uses. Stable isotopes of carbon, nitrogen, and deuterium were collected for all size classes of OM, and DOM was analyzed with a spectrofluorometer. Stable isotopes were used to estimate the proportion of autochthonous and terrestrial sources of OM. Fluorescence indices and a PARAFAC model were created from DOM excitation emission matrices (EEMs). FPOM appeared to be a mixture of autochthonous and terrestrial sources but overlap in endmember isotope values made quantifying the proportion of each source difficult. Higher deuterium values (-120 to -80‰) were associated with sites receiving wastewater effluent, while sites with agriculture, forest, and urban land use had lower deuterium isotope values (-200 to -110). DOM Excitation Emission Matrices were resolved into a 5-component PARAFAC model. The percent of protein-like DOM components tended to be higher in urban versus non-urban sites (mean 35%, S.D. 12% versus mean 25%, S.D. 15%). We concluded deuterium isotopes may be used as a tracer or wastewater effluent and DOM is composed of more labile, protein-like DOM with increased wastewater input. A greater understanding of the sources of OM can inform management and policy decisions aimed at mitigating the effects of OM pollution. For example, evaluating tradeoffs between mitigating the effects of OM inputs from cattle grazing versus building or improving waste water treatment facilities can be further explored.

Sorption of atrazine and ametryn by carbonatic and non-carbonatic soils of varied origin.

PubMed

Kasozi, G N; Nkedi-Kizza, P; Li, Y; Zimmerman, A R

2012-10-01

Sorption of two s-triazines, atrazine and ametryn, by carbonatic soils, Histosols, Spodosols and Oxisols was examined. Linear isotherms were observed and sorption coefficients (K(d)) of both compounds were significantly lower (α = 0.05) onto carbonatic soils compared to non-carbonatic soils. Furthermore, among carbonatic soil types, the marl-carbonatic soils had the lowest sorption affinities. K(d) and organic carbon content were highly correlated, suggesting predominant influence of organic carbon in the sorption of the s-triazine, except in Oxisols and Spodosols where variations suggest other factors. Upon removal of organic matter (OM) using sodium hypochlorite and hydrogen peroxide, the K(d) values were reduced by ~90%, indicating minimal contribution of mineral surfaces. Thus OM compositional differences likely explain the large variation in s-triazine sorption within and between soil orders. This study highlights the need to consider OM composition in addition to quantity when determining pesticide applications rates, particularly for carbonatic soils. Copyright © 2012 Elsevier Ltd. All rights reserved.

Organic matter diagenesis within the water column and surface sediments of the northern Sargasso Sea revealed by lipid biomarkers

NASA Astrophysics Data System (ADS)

Conte, M. H.; Pedrosa Pàmies, R.; Weber, J.

2017-12-01

The intensity of particle cycling processes within the mesopelagic and bathypelagic ocean controls the length scale of organic material (OM) remineralization and diagenetic transformations of OM composition through the water column and into the sediments. To elucidate the OM cycling in the oligotrophic North Atlantic gyre, we analyzed lipid biomarkers in the suspended particles (30-4400 m depth, 100 mab), the particle flux (500 m, 1500 m and 3200 m depth), and in the underlying surficial sediments (0-0.5 cm, 4500-4600 m depth) collected at the Oceanic Flux Program (OFP) time series site located 75km SE of Bermuda. Changes in lipid biomarker concentration and composition with depth highlight the rapid remineralization of OM within the upper mesopelagic layer and continuing diagenetic transformations of OM throughout the water column and within surficial sediments. Despite observed similarities in biomarker composition in suspended and sinking particles, results show there are also consistent differences in relative contributions of phytoplankton-, bacterial- and zooplankton-derived sources that are maintained throughout the water column. For example, sinking particles are more depleted in labile biomarkers (e.g. polyunsaturated fatty acids (PUFA)) and more enriched in bacteria-derived biomarkers (e.g. hopanoids and odd/branched fatty acids) and indicators of fecal-derived OM (e.g. saturated fatty acids, FA 18:1w9 and cholesterol) than in the suspended pool. Strong seasonality in deep (3200 m) fluxes of phytoplankton-derived biomarkers reflect the seasonal input of bloom-derived material to underlying sediments. The rapid diagenetic alteration of this bloom-derived input is evidenced by depletion of PUFAs and enrichment of microbial biomarkers (e.g. odd/branched fatty acids) in surficial sediments over a two month period.

Sequential extraction protocol for organic matter from soils and sediments using high resolution mass spectrometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tfaily, Malak M.; Chu, Rosalie K.; Toyoda, Jason

A vast number of organic compounds are present in soil organic matter (SOM) and play an important role in the terrestrial carbon cycle, facilitate interactions between organisms, and represent a sink for atmospheric CO2. The diversity of different SOM compounds and their molecular characteristics is a function of the organic source material and biogeochemical history. By understanding how SOM composition changes with sources and the processes by which it is biogeochemically altered in different terrestrial ecosystems, it may be possible to predict nutrient and carbon cycling, response to system perturbations, and impact of climate change will have on SOM composition.more » In this study, a sequential chemical extraction procedure was developed to reveal the diversity of organic matter (OM) in different ecosystems and was compared to the previously published protocol using parallel solvent extraction (PSE). We compared six extraction methods using three sample types, peat soil, spruce forest soil and river sediment, so as to select the best method for extracting a representative fraction of organic matter from soils and sediments from a wide range of ecosystems. We estimated the extraction yield of dissolved organic carbon (DOC) by total organic carbon analysis, and measured the composition of extracted OM using high resolution mass spectrometry. This study showed that OM composition depends primarily on soil and sediment characteristics. Two sequential extraction protocols, progressing from polar to non-polar solvents, were found to provide the highest number and diversity of organic compounds extracted from the soil and sediments. Water (H2O) is the first solvent used for both protocols followed by either co-extraction with methanol-chloroform (MeOH-CHCl3) mixture, or acetonitrile (ACN) and CHCl3 sequentially. The sequential extraction protocol developed in this study offers improved sensitivity, and requires less sample compared to the PSE workflow where a new sample is used for each solvent type. Furthermore, a comparison of SOM composition from the different sample types revealed that our sequential protocol allows for ecosystem comparisons based on the diversity of compounds present, which in turn could provide new insights about source and processing of organic compounds in different soil and sediment types.« less

Sequential extraction protocol for organic matter from soils and sediments using high resolution mass spectrometry.

PubMed

Tfaily, Malak M; Chu, Rosalie K; Toyoda, Jason; Tolić, Nikola; Robinson, Errol W; Paša-Tolić, Ljiljana; Hess, Nancy J

2017-06-15

A vast number of organic compounds are present in soil organic matter (SOM) and play an important role in the terrestrial carbon cycle, facilitate interactions between organisms, and represent a sink for atmospheric CO 2 . The diversity of different SOM compounds and their molecular characteristics is a function of the organic source material and biogeochemical history. By understanding how SOM composition changes with sources and the processes by which it is biogeochemically altered in different terrestrial ecosystems, it may be possible to predict nutrient and carbon cycling, response to system perturbations, and impact of climate change will have on SOM composition. In this study, a sequential chemical extraction procedure was developed to reveal the diversity of organic matter (OM) in different ecosystems and was compared to the previously published protocol using parallel solvent extraction (PSE). We compared six extraction methods using three sample types, peat soil, spruce forest soil and river sediment, so as to select the best method for extracting a representative fraction of organic matter from soils and sediments from a wide range of ecosystems. We estimated the extraction yield of dissolved organic carbon (DOC) by total organic carbon analysis, and measured the composition of extracted OM using high resolution mass spectrometry. This study showed that OM composition depends primarily on soil and sediment characteristics. Two sequential extraction protocols, progressing from polar to non-polar solvents, were found to provide the highest number and diversity of organic compounds extracted from the soil and sediments. Water (H 2 O) is the first solvent used for both protocols followed by either co-extraction with methanol-chloroform (MeOH-CHCl 3 ) mixture, or acetonitrile (ACN) and CHCl 3 sequentially. The sequential extraction protocol developed in this study offers improved sensitivity, and requires less sample compared to the PSE workflow where a new sample is used for each solvent type. Furthermore, a comparison of SOM composition from the different sample types revealed that our sequential protocol allows for ecosystem comparisons based on the diversity of compounds present, which in turn could provide new insights about source and processing of organic compounds in different soil and sediment types. Copyright © 2017 Elsevier B.V. All rights reserved.

Impacts of human activity and extreme weather events on sedimentary organic matter in the Andong salt marsh, Hangzhou Bay, China

NASA Astrophysics Data System (ADS)

Loh, Pei Sun; Cheng, Long-Xiu; Yuan, Hong-Wei; Yang, Lin; Lou, Zhang-Hua; Jin, Ai-Min; Chen, Xue-Gang; Lin, Yu-Shih; Chen, Chen-Tung Arthur

2018-02-01

In this study, lignin-derived phenols, stable carbon isotopes and bulk elemental compositions were determined along the length of two sediment cores (C1 and C2) from the Andong salt marsh, which is located southwest of Hangzhou Bay, China. The purpose of this study was to determine the short-term changes and their implications along sediment profiles. The 1997 high tide had caused an increase in the terrestrial organic matter (OM) signal from 1996/1997 to 2000 in both cores, which was indicated by a high Λ (total lignin in mg/100 mg OC), TOC, C/N and more negative δ13C values. The slight increases in terrestrial OM along the length of the cores between 2003 and 2006 were most likely attributable to the construction of the Hangzhou Bay Bridge. Both events have likely caused an increase in erosion, and thus, these events have increased the input of terrestrial OM to nearby areas. The effects of the distinctively dry year of 2006 can be observed along C2 between 2006 and 2008 in the steadily declining terrestrial OM signal. The overall slight decrease in terrestrial OM and the distinct increase in TOC along the length of both cores toward the present were most likely because of the overall reduced sediment caused by the trapping of materials within reservoirs. These results show that the reduction in terrestrial OM in the Andong salt marsh for the past 30 years was due to reservoirs and the 2006 drought, but this was counterbalanced by the 1997 high tide event and construction of the Hangzhou Bay Bridge, which resulted in increased erosion and terrestrial OM input.

A 21 000-year record of fluorescent organic matter markers in the WAIS Divide ice core

NASA Astrophysics Data System (ADS)

D'Andrilli, Juliana; Foreman, Christine M.; Sigl, Michael; Priscu, John C.; McConnell, Joseph R.

2017-05-01

Englacial ice contains a significant reservoir of organic material (OM), preserving a chronological record of materials from Earth's past. Here, we investigate if OM composition surveys in ice core research can provide paleoecological information on the dynamic nature of our Earth through time. Temporal trends in OM composition from the early Holocene extending back to the Last Glacial Maximum (LGM) of the West Antarctic Ice Sheet Divide (WD) ice core were measured by fluorescence spectroscopy. Multivariate parallel factor (PARAFAC) analysis is widely used to isolate the chemical components that best describe the observed variation across three-dimensional fluorescence spectroscopy (excitation-emission matrices; EEMs) assays. Fluorescent OM markers identified by PARAFAC modeling of the EEMs from the LGM (27.0-18.0 kyr BP; before present 1950) through the last deglaciation (LD; 18.0-11.5 kyr BP), to the mid-Holocene (11.5-6.0 kyr BP) provided evidence of different types of fluorescent OM composition and origin in the WD ice core over 21.0 kyr. Low excitation-emission wavelength fluorescent PARAFAC component one (C1), associated with chemical species similar to simple lignin phenols was the greatest contributor throughout the ice core, suggesting a strong signature of terrestrial OM in all climate periods. The component two (C2) OM marker, encompassed distinct variability in the ice core describing chemical species similar to tannin- and phenylalanine-like material. Component three (C3), associated with humic-like terrestrial material further resistant to biodegradation, was only characteristic of the Holocene, suggesting that more complex organic polymers such as lignins or tannins may be an ecological marker of warmer climates. We suggest that fluorescent OM markers observed during the LGM were the result of greater continental dust loading of lignin precursor (monolignol) material in a drier climate, with lower marine influences when sea ice extent was higher and continents had more expansive tundra cover. As the climate warmed, the record of OM markers in the WD ice core changed, reflecting shifts in carbon productivity as a result of global ecosystem response.

Carbohydrates and thermal analysis reflects changes in soil organic matter stability after forest expansion on abandoned grassland

NASA Astrophysics Data System (ADS)

Guidi, Claudia; Vesterdal, Lars; Cannella, David; Leifeld, Jens; Gianelle, Damiano; Rodeghiero, Mirco

2014-05-01

Grassland abandonment, followed by progressive forest expansion, is the dominant land-use change in the Southern Alps, Europe. Land-use change can affect not only the amount of organic matter (OM) in soil but also its composition and stability. Our objective was to investigate changes in organic matter properties after forest expansion on abandoned grasslands, combining analysis of carbohydrates, indicative of labile OM compounds with prevalent plant or microbial origin, with thermal analysis. Thermal analysis was used as a rapid assessment method for the characterization of SOM stability. A land-use gradient was investigated in four land-use types in the subalpine area of Trentino region, Italy: i) managed grassland, mown and fertilized for the past 100 years; ii) grassland abandoned since 10 years, with sparse shrubs and Picea abies saplings; iii) early-stage forest, dominated by P. abies and established on a grassland abandoned around 1970; iv) old forest, dominated by Fagus sylvatica and P. abies. Mineral soil was sampled at three subplots in each land use type with eight soil cores, which were subsequently pooled by depth (0-5 cm, 5-10 cm, 10-20 cm). Sugars were extracted from bulk soil samples through acid hydrolysis with H2SO4 (0.5 M). The analytical composition of sugar monomers was performed with HPAEC technology (Dionex ICS5000), equipped with PAD-detection. Thermal stability was assessed with a differential scanning calorimeter DSC100, heating soil samples up to 600°C at a heating rate of 10°C min-1 in synthetic air. Peak height (W g OC-1) of 1st DSC exotherm, dominated by burning of labile OM compounds, was used as thermal stability index. In the abandoned grassland, carbohydrates compounds accounted for a greater proportion of soil OC than in other land use types. Microbially derived sugars, as rhamnose and galactose, were more abundant in managed and abandoned grasslands compared with early-stage and old forest. The amount of thermally labile sugars, estimated as the peak height of the 1st exotherm, was higher in the abandoned grassland compared with managed grassland and old forest in 0-5 cm depth. Moreover, thermally labile compounds were higher in early-stage than in old forest in 0-5 cm depth. A highly significant correlation was found between thermally labile compounds and carbohydrate content in soil (P = 0.008, r = 0.725). The obtained results suggest that both thermally-labile compounds and carbohydrates are more abundant soon after grassland abandonment, which can lead to lower OM stability. The combination of chemical and thermal analysis of OM can thus provide useful insights on organic matter composition and stability.

Size and composition distributions of particulate matter emissions: part 2--heavy-duty diesel vehicles.

PubMed

Robert, Michael A; Kleeman, Michael J; Jakober, Christopher A

2007-12-01

Particulate matter (PM) emissions from heavy-duty diesel vehicles (HDDVs) were collected using a chassis dynamometer/dilution sampling system that employed filter-based samplers, cascade impactors, and scanning mobility particle size (SMPS) measurements. Four diesel vehicles with different engine and emission control technologies were tested using the California Air Resources Board Heavy Heavy-Duty Diesel Truck (HHDDT) 5 mode driving cycle. Vehicles were tested using a simulated inertial weight of either 56,000 or 66,000 lb. Exhaust particles were then analyzed for total carbon, elemental carbon (EC), organic matter (OM), and water-soluble ions. HDDV fine (< or =1.8 microm aerodynamic diameter; PM1.8) and ultrafine (0.056-0.1 microm aerodynamic diameter; PM0.1) PM emission rates ranged from 181-581 mg/km and 25-72 mg/km, respectively, with the highest emission rates in both size fractions associated with the oldest vehicle tested. Older diesel vehicles produced fine and ultrafine exhaust particles with higher EC/OM ratios than newer vehicles. Transient modes produced very high EC/OM ratios whereas idle and creep modes produced very low EC/OM ratios. Calcium was the most abundant water-soluble ion with smaller amounts of magnesium, sodium, ammonium ion, and sulfate also detected. Particle mass distributions emitted during the full 5-mode HDDV tests peaked between 100-180 nm and their shapes were not a function of vehicle age. In contrast, particle mass distributions emitted during the idle and creep driving modes from the newest diesel vehicle had a peak diameter of approximately 70 nm, whereas mass distributions emitted from older vehicles had a peak diameter larger than 100 nm for both the idle and creep modes. Increasing inertial loads reduced the OM emissions, causing the residual EC emissions to shift to smaller sizes. The same HDDV tested at 56,000 and 66,000 lb had higher PM0.1 EC emissions (+22%) and lower PM0.1 OM emissions (-38%) at the higher load condition.

Unique Organic Matter and Microbial Properties in the Rhizosphere of a Wetland Soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kaplan, Daniel I.; Xu, Chen; Huang, Shan

Wetlands attenuate the migration of many contaminants through a wide range of biogeochemical reactions. Recent research has shown that the rhizosphere, the zone near plant roots, in wetlands is especially effective at promoting contaminant attenuation. The objective of this study was to compare the soil organic matter (OM) composition and microbial communities of a rhizosphere soil (primarily an oxidized environment) to that of the bulk wetland soil (primarily a reduced environment). The rhizosphere had elevated C, N, Mn, and Fe concentrations and total bacteria, including Anaeromyxobacter, counts (as identified by qPCR). Furthermore, the rhizosphere contained several organic molecules that weremore » not identified in the nonrhizosphere soil (54% of the >2200 ESI-FTICR-MS identified compounds). The rhizosphere OM molecules generally had (1) greater overall molecular weights, (2) less aromaticity, (3) more carboxylate and N-containing COO functional groups, and (4) a greater hydrophilic character. These latter two OM properties typically promote metal binding. This study showed for the first time that not only the amount but also the molecular characteristics of OM in the rhizosphere may in part be responsible for the enhanced immobilization of contaminants in wetlands. These finding have implications on the stewardship and long-term management of contaminated wetlands« less

Organic matter pools, C turnover and meiofaunal biodiversity in the sediments of the western Spitsbergen deep continental margin, Svalbard Archipelago

NASA Astrophysics Data System (ADS)

Pusceddu, A.; Carugati, L.; Gambi, C.; Mienert, J.; Petani, B.; Sanchez-Vidal, A.; Canals, M.; Heussner, S.; Danovaro, R.

2016-01-01

We investigated organic matter (OM) quantity, nutritional quality and degradation rates, as well as abundance and biodiversity of meiofauna and nematodes along the deep continental margin off Spitsbergen, in the Svalbard Archipelago. Sediment samples were collected in July 2010 and 2011 along a bathymetric gradient between 600 m and 2000 m depth, and total mass flux measured at the same depths from July 2010 to July 2011. In both sampling periods sedimentary OM contents and C degradation rates increased significantly with water depth, whereas OM nutritional quality was generally higher at shallower depths, with the unique exception at 600 m depth in 2010. Meiofaunal abundance and biomass (largely dominated by nematodes) showed the highest values at intermediate depths (ca 1500 m) in both sampling periods. The richness of meiofaunal higher taxa and nematode species richness did not vary significantly with water depth in both sampling periods. We suggest here that patterns in OM quantity, C degradation rates, and meiofauna community composition in 2011 were likely influenced by the intensification of the warm West Spitsbergen Current (WSC). We hypothesize that the intensity of the WSC inflow to the Arctic Ocean could have an important role on benthic biodiversity and functioning of deep-sea Arctic ecosystems.

Origin and distribution of hydrocarbons and organic matter in the surficial sediments of the Sfax-Kerkennah channel (Tunisia, Southern Mediterranean Sea).

PubMed

Zaghden, Hatem; Tedetti, Marc; Sayadi, Sami; Serbaji, Mohamed Moncef; Elleuch, Boubaker; Saliot, Alain

2017-04-15

We investigated the origin and distribution of aliphatic and polycyclic aromatic hydrocarbons (AHs and PAHs) and organic matter (OM) in surficial sediments of the Sfax-Kerkennah channel in the Gulf of Gabès (Tunisia, Southern Mediterranean Sea). TOC, AH and PAH concentrations ranged 2.3-11.7%, 8-174μgg -1 sed.dw and 175-10,769ngg -1 sed.dw, respectively. The lowest concentrations were recorded in the channel (medium sand sediment) and the highest ones in the Sfax harbor (very fine sand sediment). AHs, PAHs and TOC were not correlated for most of the stations. TOC/N and δ 13 C values revealed a mixed origin of OM with both marine and terrestrial sources. Hydrocarbon molecular composition highlighted the dominance of petrogenic AHs and the presence of both petrogenic and pyrogenic PAHs, associated with petroleum products and combustion processes. This work underscores the complex distribution patterns and the multiple sources of OM and hydrocarbons in this highly anthropogenized coastal environment. Copyright © 2017 Elsevier Ltd. All rights reserved.

Relationship between soluble microbial products (SMP) and effluent organic matter (EfOM): characterized by fluorescence excitation emission matrix coupled with parallel factor analysis.

PubMed

Yu, Huarong; Qu, Fangshu; Sun, Lianpeng; Liang, Heng; Han, Zhengshuang; Chang, Haiqing; Shao, Senlin; Li, Guibai

2015-02-01

Effluent organic matter (EfOM) originating from wastewater treatment plant (WWTP) is of significant concern, as it not only influences the discharge quality of WWTP but also exerts a significant effect on the efficiency of the downstream advanced treatment facilities. Soluble microbial products (SMP) is a major part of EfOM. In order to further understand the relationship between soluble microbial products (SMP) and EfOM, and in turn, to propose measures for EfOM control, the formation of SMP and EfOM in identical activated sludge sequencing batch reactors (SBR) with different feed water was investigated using fluorescence excitation and emission spectroscopy matrix coupled with parallel factor analysis (EEM-PARAFAC) as well as other organic matter quantification tools. Results showed that EfOM contained not only SMP but also a considerable amount of allochthonous organic matter that derived not merely from natural organic matter (NOM). Four components in EfOM/SMP were identified by EEM-PARAFAC. Tyrosine-like substances in EfOM (Component 3, λex/em=270/316 nm) were mainly originated from utilization associated products (UAP) of SMP. Tryptophan-like substances (Component 2, λex/em=280/336 nm) as well as fulvic-like and humic-like substances in EfOM (Component 1, λex/em=240(290)/392 nm and Component 4, λex/em=260(365)/444 nm) were majorly derived from the refractory substances introduced along with the influent, among which Component 2 was stemmed from sources other than NOM. As solid retention time (SRT) increased, Component 2 and polysaccharides in SMP/EfOM decreased, while Component 4 in SMP increased. Copyright © 2014 Elsevier Ltd. All rights reserved.

The oxygen isotope enrichment of leaf-exported assimilates--does it always reflect lamina leaf water enrichment?

PubMed

Gessler, Arthur; Brandes, Elke; Keitel, Claudia; Boda, Sonja; Kayler, Zachary E; Granier, André; Barbour, Margaret; Farquhar, Graham D; Treydte, Kerstin

2013-10-01

The oxygen stable isotope composition of plant organic matter (OM) (particularly of wood and cellulose in the tree ring archive) is valuable in studies of plant-climate interaction, but there is a lack of information on the transfer of the isotope signal from the leaf to heterotrophic tissues. We studied the oxygen isotopic composition and its enrichment above source water of leaf water over diel courses in five tree species covering a broad range of life forms. We tracked the transfer of the isotopic signal to leaf water-soluble OM and further to phloem-transported OM. Observed leaf water evaporative enrichment was consistent with values predicted from mechanistic models taking into account nonsteady-state conditions. While leaf water-soluble OM showed the expected (18)O enrichment in all species, phloem sugars were less enriched than expected from leaf water enrichment in Scots pine (Pinus sylvestris), European larch (Larix decidua) and Alpine ash (Eucalyptus delegatensis). Oxygen atom exchange with nonenriched water during phloem loading and transport, as well as a significant contribution of assimilates from bark photosynthesis, can explain these phloem (18)O enrichment patterns. Our results indicate species-specific uncoupling between the leaf water and the OM oxygen isotope signal, which is important for the interpretation of tree ring data. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

An initial investigation into the organic matter biogeochemistry of the Congo River

NASA Astrophysics Data System (ADS)

Spencer, Robert G. M.; Hernes, Peter J.; Aufdenkampe, Anthony K.; Baker, Andy; Gulliver, Pauline; Stubbins, Aron; Aiken, George R.; Dyda, Rachael Y.; Butler, Kenna D.; Mwamba, Vincent L.; Mangangu, Arthur M.; Wabakanghanzi, Jose N.; Six, Johan

2012-05-01

The Congo River, which drains pristine tropical forest and savannah and is the second largest exporter of terrestrial carbon to the ocean, was sampled in early 2008 to investigate organic matter (OM) dynamics in this historically understudied river basin. We examined the elemental (%OC, %N, C:N), isotopic (δ13C, Δ14C, δ15N) and biochemical composition (lignin phenols) of coarse particulate (>63 μm; CPOM) and fine particulate (0.7-63 μm; FPOM) OM and DOC, δ13C, Δ14C and lignin phenol composition with respect to dissolved OM (<0.7 μm; DOM) from five sites in the Congo River Basin. At all sample locations the organic carbon load was dominated by the dissolved phase (˜82-89% of total organic carbon) and the total suspended sediment load was principally fine particulate material (˜81-91% fine suspended sediment). Distinct compositional and isotopic differences were observed between all fractions. Congo CPOM, FPOM and DOM all originated from vegetation and soil inputs as evidenced by elemental, isotopic and lignin phenol data, however FPOM was derived from much older carbon pools (mean Δ14C = -62.2 ± -13.2‰, n = 5) compared to CPOM and DOM (mean Δ14C = 55.7 ± 30.6‰, n = 4 and 73.4 ± 16.1‰, n = 5 respectively). The modern radiocarbon ages for DOM belie a degraded lignin compositional signature (i.e. elevated acid:aldehyde ratios (Ad:Al) relative to CPOM and FPOM), and indicate that the application of OM degradation patterns derived from particulate phase studies to dissolved samples needs to be reassessed: these elevated ratios are likely attributable to fractionation processes during solubilization of plant material. The relatively low DOM carbon-normalized lignin yields (Λ8; 0.67-1.12 (mg(100 mg OC)-1)) could also reflect fractionation processes, however, they have also been interpreted as an indication of significant microbial or algal sources of DOM. CPOM appears to be well preserved higher vascular plant material as evidenced by its modern radiocarbon age, elevated C:N (17.2-27.1) and Λ8 values (4.56-7.59 (mg(100 mg OC)-1)). In relation to CPOM, the aged FPOM fraction (320-580 ybp 14C ages) was comparatively degraded, as demonstrated by its nitrogen enrichment (C:N 11.4-14.3), lower Λ8 (2.80-4.31 (mg(100 mg OC)-1)) and elevated lignin Ad:Al values similar to soil derived OM. In this study we observed little modification of the OM signature from sample sites near the cities of Brazzaville and Kinshasa to the head of the estuary (˜350 km) highlighting the potential for future studies to assess seasonal and long-term OM dynamics from this logistically feasible location and derive relevant information with respect to OM exported to the Atlantic Ocean. The relative lack of OM data for the Congo River Basin highlights the importance of studies such as this for establishing baselines upon which to gauge future change.

Investigating Marine Dissolved Organic Matter Fluorescence Transformations with Organic Geochemical Proxies in a Growth and Degradation Experiment using Amino Acids, Amino Sugars, and Phenols

NASA Astrophysics Data System (ADS)

Shields, M. R.; Bianchi, T. S.; Osburn, C. L.; Kinsey, J. D.; Ziervogel, K.; Schnetzer, A.

2017-12-01

The origin and mechanisms driving the formation of fluorescent dissolved organic matter (FDOM) in the open ocean remain unclear. Although recent studies have attempted to deconvolve the chemical composition and source of marine FDOM, these studies have been qualitative in nature. Here, we investigate these transformations using a more quantitative biomarker approach in a controlled growth and degradation experiment. In this experiment, a natural assemblage of phytoplankton was collected off the coast of North Carolina and incubated within roller bottles containing 0.2 µm-filtered North Atlantic surface water amended with f/2 nutrients. Samples were collected at the beginning (day 0), during exponential growth (day 13), stationary (day 20), and degradation (day 62) phases of the phytoplankton incubation. Amino acids, amino sugars, and phenolic compounds of the dissolved (DOM) were measured in conjunction with enzyme assays and bacterial counts to track shifts in OM quality as FDOM formed and was then transformed throughout the experiment. The results from the chemical analyses showed that the OM composition changed significantly from the initial and exponential phases to the stationary and degradation phases of the experiment. The percentage of aromatic amino acids to the total amino acid pool increased significantly during the exponential phase of phytoplankton growth, but then decreased significantly during the stationary and degradation phases. This increase was positively correlated to the fractional contribution of the protein-like peak in fluorescence to the total FDOM fluorescence. An increase in the concentration of amino acid degradation products during the stationary and degradation phases suggests that compositional changes in OM were driven by microbial transformation. This was further supported by a concurrent increase in total enzyme activity and increase in "humic-like" components of the FDOM. These findings link the properties and formation of FDOM to the overall quality and diagenetic state of marine OM and to the marine carbon and nitrogen cycles.

Insights into the photo-induced formation of reactive intermediates from effluent organic matter: The role of chemical constituents.

PubMed

Zhou, Huaxi; Lian, Lushi; Yan, Shuwen; Song, Weihua

2017-04-01

In the present study, the formation of triplet states of organic matters ( 3 OM ∗ ) from effluent organic matter (EfOM) under simulated solar irradiation was investigated. EfOM was separated into hydrophobic (HPO), transphilic (TPI), and hydrophilic (HPI) components. The quantum yield coefficients (ƒ TMP ) of 3 OM ∗ were measured for each component and compared to those of reference natural organic matter (NOM). NaBH 4 reduction was performed on the EfOM, and the effect of aromatic ketones moieties on triplet formation was also determined. Furthermore, the apparent quantum yield of 1 O 2 (Φ 1O2 ) and O 2 •- (Φ O2•- ) was measured. Our results suggested that the HPI fraction acted as a sink for 3 OM ∗ . A linear correlation was observed between ƒ TMP and Φ 1O2 for NOM/EfOM, except for NaBH 4 -reduced effluent and HPI components. Both ƒ TMP and Φ 1O2 were positively correlated with the contribution rates of NaBH 4 -reducible moieties (aromatic ketones) toward 3 OM ∗ . Aromatic ketones were primarily responsible for the production of 3 OM ∗ from EfOM, whereas quinone moieties played a key role in the production of 3 OM ∗ in NOM-enriched solutions. Understanding the role of chemical constituents on the photo activity of EfOM/NOM is essential for providing useful insights on their photochemical effects in aquatic systems. Copyright © 2017 Elsevier Ltd. All rights reserved.

Effects of complexation between organic matter (OM) and clay mineral on OM pyrolysis

NASA Astrophysics Data System (ADS)

Bu, Hongling; Yuan, Peng; Liu, Hongmei; Liu, Dong; Liu, Jinzhong; He, Hongping; Zhou, Junming; Song, Hongzhe; Li, Zhaohui

2017-09-01

The stability and persistence of organic matter (OM) in source rocks are of great significance for hydrocarbon generation and the global carbon cycle. Clay-OM associations commonly occur in sedimentation and diagenesis processes and can influence the pyrolytic behaviors of OM. In this study, clay-OM complexes, i.e., interlayer clay-OM complexes and clay-OM mixture, were prepared and exposed to high-pressure pyrolysis conditions in confined gold capsule reactors to assess variations in OM pyrolysis products in the presence of clay minerals. Three model organic compounds, octadecanoic acid (OA), octadecy trimethyl ammonium bromide (OTAB), and octadecylamine (ODA), were employed and montmorillonite (Mt) was selected as the representative clay mineral. The solid acidity of Mt plays a key role in affecting the amount and composition of the pyrolysis gases generated by the clay-OM complexes. The Brønsted acid sites significantly promote the cracking of hydrocarbons through a carbocation mechanism and the isomerization of normal hydrocarbons. The Lewis acid sites are primarily involved in the decarboxylation reaction during pyrolysis and are responsible for CO2 generation. Mt exhibits either a catalysis effect or pyrolysis-inhibiting during pyrolysis of a given OM depending on the nature of the model organic compound and the nature of the clay-OM complexation. The amounts of C1-5 hydrocarbons and CO2 that are released from the Mt-OA and Mt-ODA complexes were higher than those of the parent OA and ODA, respectively, indicating a catalysis effect of Mt. In contrast, the amount of C1-5 hydrocarbons produced from the pyrolysis of Mt-OTAB complexes was lower than that of OTAB, which we attribute to an inhibiting effect of Mt. This pyrolysis-inhibiting effect works through the Hoffmann elimination that is promoted by the catalysis of the Brønsted acid sites of Mt, therefore releasing smaller amounts of gas hydrocarbons than the nucleophilic reaction that is induced by the halide ions in OTAB. In particular, the interlayer space of Mt acts as an 'amplifier' that magnifies the above-mentioned catalysis or pyrolysis-inhibiting effect, due to the greater number of Brønsted acid sites with high acidity in the interlayer space. These findings are potentially important for understanding the storage and transfer mechanisms of natural OM in sedimentation and diagenesis processes.

Impact of natural organic matter coatings on the microbial reduction of iron oxides

NASA Astrophysics Data System (ADS)

Poggenburg, Christine; Mikutta, Robert; Schippers, Axel; Dohrmann, Reiner; Guggenberger, Georg

2018-03-01

Iron (Fe) oxyhydroxides are important constituents of the soil mineral phase known to stabilize organic matter (OM) under oxic conditions. In an anoxic milieu, however, these Fe-organic associations are exposed to microbial reduction, releasing OM into soil solution. At present, only few studies have addressed the influence of adsorbed natural OM (NOM) on the reductive dissolution of Fe oxyhydroxides. This study therefore examined the impact of both the composition and concentration of adsorbed NOM on microbial Fe reduction with regard to (i) electron shuttling, (ii) complexation of Fe(II,III), (iii) surface site coverage and/or pore blockage, and (iv) aggregation. Adsorption complexes with varying carbon loadings were synthesized using different Fe oxyhydroxides (ferrihydrite, lepidocrocite, goethite, hematite, magnetite) and NOM of different origin (extracellular polymeric substances from Bacillus subtilis, OM extracted from soil Oi and Oa horizons). The adsorption complexes were characterized by X-ray diffraction (XRD), Fourier transform infrared spectroscopy (FTIR), X-ray photoelectron spectroscopy (XPS), N2 gas adsorption, electrophoretic mobility and particle size measurements, and OM desorption. Incubation experiments under anaerobic conditions were conducted for 16 days comparing two different strains of dissimilatory Fe(III)-reducing bacteria (Shewanella putrefaciens, Geobacter metallireducens). Mineral transformation during reduction was assessed via XRD and FTIR. Microbial reduction of the pure Fe oxyhydroxides was controlled by the specific surface area (SSA) and solubility of the minerals. For Shewanella putrefaciens, the Fe reduction of adsorption complexes strongly correlated with the concentration of potentially usable electron-shuttling molecules for NOM concentrations <2 mg C L-1, whereas for Geobacter metallireducens, Fe reduction depended on the particle size and thus aggregation of the adsorption complexes. These diverging results suggest that the influence of NOM on the stability of Fe-organic associations in soils cannot easily be assessed without considering the composition of the microbial soil community.

Sulfurized carbohydrates: an important sedimentary sink for organic carbon?

NASA Astrophysics Data System (ADS)

Sinninghe Damsté, Jaap S.; Kok, Marika D.; Köster, Jürgen; Schouten, Stefan

1998-12-01

In contrast to the general belief that carbohydrate carbon (C CHO) is preferentially degraded and is not extensively preserved in the sedimentary record, it is shown here that C CHO forms a large fraction of the organic matter (OM) of the total organic carbon (TOC)-rich upper Jurassic Kimmeridge Clay Formation as a result of early diagenetic sulfurization, a previously unrecognized pathway of OM preservation. This is evident from both changes in the molecular composition of the insoluble OM and from δ 13C TOC shifts of 6‰ with varying C CHO contents. Furthermore, experiments simulating the natural sulfurization of the C CHO-rich alga Phaeocystis spp. demonstrated that sulfurization can indeed lead to a substantial preservation of C CHO with a molecular fingerprint identical to that of the Kimmeridge Clay and many other Recent and ancient marine OM-rich sediments. These results imply that preservation of C CHO can exert a fundamental control on δ 13C TOC in OM-rich sediments, complicating the interpretation of δ 13C TOC records with regard to estimating terrestrial versus aquatic OM fractions, reconstruction of past atmospheric CO 2 levels and global carbon budget models.

Biological and land use controls on the isotopic composition of aquatic carbon in the Upper Mississippi River Basin

NASA Astrophysics Data System (ADS)

Voss, Britta M.; Wickland, Kimberly P.; Aiken, George R.; Striegl, Robert G.

2017-08-01

Riverine ecosystems receive organic matter (OM) from terrestrial sources, internally produce new OM, and biogeochemically cycle and modify organic and inorganic carbon. Major gaps remain in the understanding of the relationships between carbon sources and processing in river systems. Here we synthesize isotopic, elemental, and molecular properties of dissolved organic carbon (DOC), particulate organic carbon (POC), and dissolved inorganic carbon (DIC) in the Upper Mississippi River (UMR) system above Wabasha, MN, including the main stem Mississippi River and its four major tributaries (Minnesota, upper Mississippi, St. Croix, and Chippewa Rivers). Our goal was to elucidate how biological processing modifies the chemical and isotopic composition of aquatic carbon pools during transport downstream in a large river system with natural and man-made impoundments. Relationships between land cover and DOC carbon-isotope composition, absorbance, and hydrophobic acid content indicate that DOC retains terrestrial carbon source information, while the terrestrial POC signal is largely replaced by autochthonous organic matter, and DIC integrates the influence of in-stream photosynthesis and respiration of organic matter. The UMR is slightly heterotrophic throughout the year, but pools formed by low-head navigation dams and natural impoundments promote a shift toward autotrophic conditions, altering aquatic ecosystem dynamics and POC and DIC compositions. Such changes likely occur in all major river systems affected by low-head dams and need to be incorporated into our understanding of inland water carbon dynamics and processes controlling CO2 emissions from rivers, as new navigation and flood control systems are planned for future river and water resources management.

Biological and land use controls on the isotopic composition of aquatic carbon in the Upper Mississippi River Basin

USGS Publications Warehouse

Voss, Britta; Wickland, Kimberly P.; Aiken, George R.; Striegl, Robert G.

2017-01-01

Riverine ecosystems receive organic matter (OM) from terrestrial sources, internally produce new OM, and biogeochemically cycle and modify organic and inorganic carbon. Major gaps remain in the understanding of the relationships between carbon sources and processing in river systems. Here we synthesize isotopic, elemental, and molecular properties of dissolved organic carbon (DOC), particulate organic carbon (POC), and dissolved inorganic carbon (DIC) in the Upper Mississippi River (UMR) system above Wabasha, MN, including the main stem Mississippi River and its four major tributaries (Minnesota, upper Mississippi, St. Croix, and Chippewa Rivers). Our goal was to elucidate how biological processing modifies the chemical and isotopic composition of aquatic carbon pools during transport downstream in a large river system with natural and man-made impoundments. Relationships between land cover and DOC carbon-isotope composition, absorbance, and hydrophobic acid content indicate that DOC retains terrestrial carbon source information, while the terrestrial POC signal is largely replaced by autochthonous organic matter, and DIC integrates the influence of in-stream photosynthesis and respiration of organic matter. The UMR is slightly heterotrophic throughout the year, but pools formed by low-head navigation dams and natural impoundments promote a shift towards autotrophic conditions, altering aquatic ecosystem dynamics and POC and DIC composition. Such changes likely occur in all major river systems affected by low-head dams and need to be incorporated into our understanding of inland water carbon dynamics and processes controlling CO2 emissions from rivers, as new navigation and flood control systems are planned for future river and water resources management.

Temperature sensitivity of DOC production and transformation in organic soils of the Yukon River Basin, Alaska

NASA Astrophysics Data System (ADS)

O'Donnell, J.; Butler, K. D.; Aiken, G.

2012-12-01

The flux of dissolved organic carbon (DOC) from terrestrial to aquatic ecosystems represents a critical component of the high-latitude carbon balance. In the Yukon River basin (YRB), DOC fluxes have declined in recent decades, likely in response to regional permafrost thaw and increased groundwater discharge to river flow. Despite improved flux estimates for many arctic rivers, considerable uncertainty exists regarding the potential response of DOC fluxes to projected warming. To improve estimates of future DOC dynamics, it is important to develop a process-based approach whereby empirical constraints are placed on source and sink terms in both soil and river systems. Here, we examine variability in DOC production and microbially mediated transformations as a function of both temperature and organic matter (OM) composition in soils of the YRB. We conducted "tea" experiments by incubating three organic-soil types that vary with depth and decomposition extent (live/dead moss, fibric OM and humic OM) at two temperatures (4 vs. 20 °C). Leachate samples were collected periodically over a 30-day incubation and characterized for DOC concentration, optical properties (specific UV absorbance at 254 nm or SUVA254, fluorescence), and major chemical fractions using XAD8/XAD4 resins. We observed a non-linear increase in DOC production over time, characterized by a rapid initial release of DOC from soils followed by a slower rise in DOC concentration in subsequent weeks. Mean DOC concentration was described by a significant interaction between organic-soil type and temperature, indicating a strong relationship between temperature sensitivity of net DOC production and the decomposition extent of soil OM. On average across all sampling dates, DOC concentrations were highest in leachate from fibric OM (13.4 to 17.8 mgC L-1), and lowest in leachate from humic OM (3.5 to 8.5 mgC L-1). However, the temperature sensitivity of net DOC production was highest in the humic OM treatment, with mean DOC concentrations increasing by 145% between the 4 and 20°C temperature treatments, whereas DOC concentrations in leachate from fibric OM only increased by 33%. We also observed compositional differences in dissolved organic matter (DOM) across experimental treatments and over time, as reflected by UV absorbance and fluorescence measurements. For instance, mean SUVA254 values increased from near-surface soil (live/dead moss = 2.28 ± 0.27 L mgC m-1) to deeper organic horizons (humic OM = 3.86 ± 0.60 L mgC m-1). SUVA254 also increased over time, suggesting selective mineralization of low-molecular weight compounds and enrichment of the aromatic DOM pool. Together, these data help to distinguish vertical differences in DOM origin and composition through soil profiles, and can be used to track the fate of terrestrial DOC under future warming at high latitudes.

Wintertime aerosol in Las Vegas, Nevada

NASA Astrophysics Data System (ADS)

Brown, Steven G.

Numerous studies have found adverse health effects in subjects who live next to major roadways due to air pollution; in particular, there can be severe impacts on lung function and development in children living and/or attending school next to major roadways due to their exposure to air pollutants, including particulate matter (PM) or aerosol. The composition of aerosol at an elementary school next to a major freeway in Las Vegas, Nevada during winter 2008 was measured using a suite of measurements. An Aerodyne High Resolution Aerosol Mass Spectrometer (HR-AMS) was used to quantify the composition of non-refractory PM1 aerosol, including organic matter (OM); an Aethalometer was used to quantify black carbon (BC); a Sunset OCEC analyzer was used to measure organic and elemental carbon (OC, EC); and a particle-into-liquid system (PILS) coupled to two ion chromatographs (IC) was used to measure fine particle ions. Hi-volume PM2.5 samplers were used to collect aerosol on quartz fiber filters at between 2 and 24 hour intervals during the study, a subset of which were analyzed for PAHs and the biomass burning tracer levoglucosan. Data were analyzed by positive matrix factorization (PMF) to determine the amount of fresh, hydrocarbon-like organic aerosol (HOA), more oxidized OA (low-volatility and semi-volatile OA [LV-OOA, SV-OOA]) and biomass burning OA (BBOA). PM1 aerosol was predominantly carbonaceous, with OM plus BC accounting for 74% of the overall average 6.9 mug/m3 of PM measured. BC had a diurnal pattern similar to traffic volume, while OM was higher in the evening compared to the morning. OM was a mixture of fresh HOA, urban- and regional-scale OOA, and BBOA; in the evening, SV-OOA and BBOA peaked, while HOA concentrations were on average the same in the morning and evening, similar to BC. OM/OC ratios were low (1.52 +/-0.14 on average) during the morning rush hour (average OM = 2.4 mug/m3) when vehicular emissions dominate this near-road measurement site, and even lower (1.46 +/- 0.10) in the evening (average OM=6.3 mug/m3), when a combination of vehicular and fresh residential biomass burning emissions was typically present during a period characterized by strong atmospheric stability. While nitrate and sulfate had size distributions typical of secondary species with a sharp peak in particle diameter between 400 nm and 500 nm, OM had a broader distribution between 100 nm and 400 nm diameter particles, reflecting its combination of fresh, smaller particles and aged, larger particles. OM concentrations were on average similar between periods when the sampling site was upwind and downwind of the freeway, though during the morning OM concentrations were higher under downwind conditions, as was the fraction of HOA.

Origin and fate of sedimentary organic matter in the northern Bay of Bengal during the last 18 ka

NASA Astrophysics Data System (ADS)

Contreras-Rosales, L. A.; Schefuß, E.; Meyer, V.; Palamenghi, L.; Lückge, A.; Jennerjahn, T. C.

2016-11-01

The Northern Bay of Bengal (NBoB) is a globally important region for deep-sea organic matter (OM) deposition due to massive fluvial discharge from the Ganges-Brahmaputra-Meghna (G-B-M) rivers and moderate to high surface productivity. Previous studies have focused on carbon burial in turbiditic sediments of the Bengal Fan. However, little is known about the storage of carbon in pelagic and hemipelagic sediments of the Bay of Bengal over millennial time scales. This study presents a comprehensive history of OM origin and fate as well as a quantification of carbon sediment storage in the Eastern Bengal Slope (EBS) during the last 18 ka. Bulk organic proxies (TOC, TIC, TN, δ13CTOC, δ15NTN) and content and composition of total hydrolysable amino acids (THAA) in a sediment core (SO188-342KL) from the EBS were analyzed. Three periods of high OM accumulation were identified: the Late Glacial (LG), the Bölling/Alleröd (B/A), and the Early Holocene Climatic Optimum (EHCO). Lower eustatic sea level before 15 ka BP allowed a closer connection between the EBS and the fluvial debouch, favoring high terrestrial OM input to the core site. This connection was progressively lost between 15 and 7 ka BP as sea level rose to its present height and terrestrial OM input decreased considerably. Export and preservation of marine OM was stimulated during periods of summer monsoon intensification (B/A and EHCO) as a consequence of higher surface productivity enhanced by cyclonic-eddy nutrient pumping and fluvial nutrient delivery into the photic zone. Changes in the THAA composition indicate that the marine plankton community structure shifted from calcareous-dominated before 13 ka BP to siliceous-dominated afterwards. They also indicate that the relative proportion of marine versus terrestrial OM deposited at site 342KL was primarily driven by relative sea level and enlarged during the Holocene. The ballasting effect of lithogenic particles during periods of high coastal proximity and/or enhanced fluvial discharge promoted the export and preservation of OM. The high organic carbon accumulation rates in the EBS during the LG (18-17 ka BP) were 5-fold higher than at present and comparable to those of glacial upwelling areas. Despite the differences in sediment and OM transport and storage among the Western and Eastern sectors of the NBoB, this region remains important for global carbon sequestration during sea level low-stands. In addition, the summer monsoon was a key promotor of terrestrial and marine OM export to the deep-ocean, highlighting its relevance as regulator of the global carbon budget.

Geomorphology controls the trophic base of stream food webs in a boreal watershed .

PubMed

Smits, Adrianne P; Schindler, Daniel E; Brett, Michael T

2015-07-01

Abstract. Physical attributes of rivers control the quantity and quality of energy sources available to consumers, but it remains untested whether geomorphic conditions of whole watersheds affect the assimilation of different resources by stream organisms. We compared the fatty acid (FA) compositions of two invertebrate taxa (caddisflies, mayflies) collected from 16 streams in southwest Alaska, USA, to assess how assimilation of terrestrial organic matter (OM) and algae varied across a landscape gradient in watershed features. We found relatively higher assimilation of algae in high-gradient streams compared with low-gradient streams, and the opposite pattern for assimilation of terrestrial OM and microbes. The strength of these patterns was more pronounced for caddisflies than mayflies. Invertebrates from low-gradient watersheds had FA markers unique to methane-oxidizing bacteria and sulfate-reducing microbes, indicating a contribution of anaerobic pathways to primary consumers. Diversity of FA composition was highest in watersheds of intermediate slopes that contain both significant terrestrial inputs as well as high algal biomass. By controlling the accumulation rate and processing of terrestrial OM, watershed features influence the energetic base of food webs in boreal streams.

Is organic matter alone sufficient to predict isoproturon sorption in calcareous soils?

PubMed

El Arfaoui, Achouak; Sayen, Stéphanie; Paris, Michaël; Keziou, Amor; Couderchet, Michel; Guillon, Emmanuel

2012-08-15

Eleven soils collected from Champagne-Ardenne area (France) were used to investigate isoproturon sorption in laboratory conditions. Our results identified the organic matter (OM) and the ratio of calcite content to OM content (Rt) as the main two parameters governing isoproturon retention in soils. While organic matter favored pesticide sorption, calcite had an antagonistic effect since it limited isoproturon retention. The Rt ratio of calcite content to organic matter content in soils appeared to be a parameter that should be considered in predictive models in addition to OM in regions presenting calcareous soils. Adsorption of isoproturon as a function of Rt and OM was successfully described through a simple empirical model. Copyright © 2012 Elsevier B.V. All rights reserved.

Biogeochemical study of water and bottom sediments from the Khai river - Nha Trang Bay estuarine system, South China Sea

NASA Astrophysics Data System (ADS)

Shulga, Natalia; Lobys, Nikolay; Drozdova, Anastasia; Peresypkin, Valery

2014-05-01

The present study was carried out in Nha Trang Bay (Southern Vietnam, the South China Sea). The samples of water, suspended matter and bottom sediments were collected in summer 2010-2012 in section from the estuary of the Khai River to the marine part of the bay. The samples were analyzed in the stationary lab of IO RAS, Moscow, by TOC-V-CPH, GC/MS and pirolysis methods. We report here the novel data on sources, transformation and burial of OM coming from the Khai river waters. The investigation is focused on ontent and distribution of suspended matter (SM) in the estuary, dissolved organic carbon (DOC), particulated organic carbon (POC); molecular and group composition of hydrocarbons (n-alkanes, steranes, hopanes) and mercury content in water, SM and bottom sediments. It was found that concentration of POC and SM decrease in the Nha Trang Bay waters from estuary to the open part of the bay. However, major changes in the concentration of SM and POC belong to the zone of salinity gradient.DOC behavior is more stable throughout the study area. Organic-geochemical indicators estimation allowed recognition of genesis and transformation degree of organic matter in the study area. The estuary is characterized by mixed genesis of SM with a predominance of allochthonous organic matter whereas outlying parts of the Nha Trang bay are characterized by autochthonous OM. Composition of OM in sediments reflects regularities identified above, despite of the interannual and seasonal variability in the study area. The investigation reveals a predominance of terrestrial organic matter in the silt sediments of the estuary, transported by the Khai river. Distribution of OM in sediments of marine part of the bay is mosaic, with a predominance of planktonogenic, bacterial or terrestrial input at their complex combination. Local anthropogenic pollution as well as an impact of industrial city effluents are found in river- and seaport areas. According to obtained data sedimentation rate in Nha Trang bay area is 36-118 g/m^2/day in summer season. Sedimentary TOC (%) in samples varies in the range 0.50 - 1.95 in 2010, 0.22 - 1.84 in 2011 and 0.27 - 1.94 in 2012. This variations associated with differences in grain size distribution of sediments and intensity of anthropogenic influence. Mercury (Hg) concentration in the bottom sediments of aquatic systems varies from 2 to 108 ng/g of dry weight. Low concentration of the metal is typical for sediments, where OM is mainly represented by remains of aquatic organisms, while high concentration are common for river- and seaport areas with mainly terrestrial origin. Our study shows terrigenous organic matter is an important agent in the transfer of mercury from land to water ecosystems and Hg migrates in dissolved forms mainly. The reported study was supported by RFBR, research project No:14-05-31059-mol_a.

Biogeochemistry of mineral-organic associations across a long-term mineralogical soil gradient (0.3-4100 kyr), Hawaiian Islands

NASA Astrophysics Data System (ADS)

Mikutta, Robert; Schaumann, Gabriele E.; Gildemeister, Daniela; Bonneville, Steeve; Kramer, Marc G.; Chorover, Jon; Chadwick, Oliver A.; Guggenberger, Georg

2009-04-01

Organic matter (OM) in mineral-organic associations (MOAs) represents a large fraction of carbon in terrestrial ecosystems which is considered stable against biodegradation. To assess the role of MOAs in carbon cycling, there is a need to better understand (i) the time-dependent biogeochemical evolution of MOAs in soil, (ii) the effect of the mineral composition on the physico-chemical properties of attached OM, and (iii) the resulting consequences for the stabilization of OM. We studied the development of MOAs across a mineralogical soil gradient (0.3-4100 kyr) at the Hawaiian Islands that derived from basaltic tephra under comparable climatic and hydrological regimes. Mineral-organic associations were characterized using biomarker analyses of OM with chemolytic methods (lignin phenols, non-cellulosic carbohydrates) and wet chemical extractions, surface area/porosity measurements (N 2 at 77 K and CO 2 at 273 K), X-ray photoelectron spectroscopy (XPS), transmission electron microscopy (TEM), and differential scanning calorimetry (DSC). The results show that in the initial weathering stage (0.3 kyr), MOAs are mainly composed of primary, low-surface area minerals (olivine, pyroxene, feldspar) with small amounts of attached OM and lignin phenols but a large contribution of microbial-derived carbohydrates. As high-surface area, poorly crystalline (PC) minerals increase in abundance during the second weathering stage (20-400 kyr), the content of mineral-associated OM increased sharply, up to 290 mg C/g MOA, with lignin phenols being favored over carbohydrates in the association with minerals. In the third and final weathering stage (1400-4100 kyr), metastable PC phases transformed into well crystalline secondary Fe and Al (hydr)oxides and kaolin minerals that were associated with less OM overall, and depleted in both lignin and carbohydrate as a fraction of total OM. XPS, the N 2 pore volume data and OM-mineral volumetric ratios suggest that, in contrast to the endmember sites where OM accumulated at the surfaces of larger mineral grains, topsoil MOAs of the 20-400-kyr sites are composed of a homogeneous admixture of small-sized PC minerals and OM, which originated from both adsorption and precipitation processes. The chemical composition of OM in surface-horizon MOAs, however, was largely controlled by the uniform source vegetation irrespective of the substrate age whereas in subsoil horizons, aromatic and carboxylic C correlated positively with oxalate-extractable Al and Si and CuCl 2-extractable Al concentrations representing PC aluminosilicates and Al-organic complexes ( r2 > 0.85). Additionally, XPS depth profiles suggest a zonal structure of sorbed OM with aromatic carbons being enriched in the proximity of mineral surfaces and amide carbons (peptides/proteins) being located in outer regions of MOAs. Albeit the mineralogical and compositional changes of OM, the rigidity of mineral-associated OM as analyzed by DSC changed little over time. A significantly reduced side chain mobility of sorbed OM was, however, observed in subsoil MOAs, which likely arose from stronger mineral-organic bindings. In conclusion, our study shows that the properties of soil MOAs change substantially over time with different mineral assemblages favoring the association of different types of OM, which is further accentuated by a vertical gradient of OM composition on mineral surfaces. Factors supporting the stabilization of sorbed OM were (i) the surface area and reactivity of minerals (primary or secondary crystalline minerals versus PC secondary minerals), (ii) the association of OM with micropores of PC minerals (via 'sterically' enhanced adsorption), (iii) the effective embedding of OM in 'well mixed' arrays with PC minerals and monomeric/polymeric metal species, (iv) the inherent stability of acidic aromatic OM components, and (iv) an impaired segmental mobility of sorbed OM, which might increase its stability against desorption and microbial utilization.

Deep Soil Carbon in the Critical Zone: Amount and Nature of Carbon in Weathered Bedrock, and its Implication for Soil Carbon Inventory

NASA Astrophysics Data System (ADS)

Moreland, K. C.; Tian, Z.; Berhe, A. A.; O'Geen, A. T.

2017-12-01

Globally, soils store more carbon (C) than the vegetation and the atmosphere combined. Up to 60-80% of the C stored in soils is found in below 30cm soil depth, but there is little data on C storage in weathered bedrock or saprolite. Deep soil organic matter (SOM) can be a mixture of new and old SOM; that is rendered relatively stable due to burial, aggregation, its disconnection from decomposers, and chemical association that organic matter forms with soil minerals. The limited data available on deep SOM dynamics suggests that stock, distribution, and composition of deep SOM are strongly correlated to climate. The overall objective of this research is to investigate how climate regulates OM storage, composition, stability, and stabilization mechanisms. Expecting that the amount of OM stored in deep soil and the stability are a function of soil thickness and availability of weathering products (i.e. reactive minerals), the stock and stability of deep SOM is expected to follow a similar relationship with climate, as does the intensity of weathering. This research is conducted in the NSF funded Southern Sierra Critical Zone Observatories that is located along a climosequence, the western slopes of the Sierra Naevada Mountains of California. Here we will present results derived from characterization of soils and weathered bedrock using elemental and stable isotope elemental analysis, and Fourier Transformed Infrared Spectroscopy to determine OM concentration and functional group level composition of bulk SOM. Our findings show that adding in subsoil and weathered bedrock C stocks increases estimates of soil C stock by 1/3rd to 2/3rd.

Energy transfer in the Congo deep-sea fan: From terrestrially-derived organic matter to chemosynthetic food webs

NASA Astrophysics Data System (ADS)

Pruski, A. M.; Decker, C.; Stetten, E.; Vétion, G.; Martinez, P.; Charlier, K.; Senyarich, C.; Olu, K.

2017-08-01

Large amounts of recent terrestrial organic matter (OM) from the African continent are delivered to the abyssal plain by turbidity currents and accumulate in the Congo deep-sea fan. In the recent lobe complex, large clusters of vesicomyid bivalves are found all along the active channel in areas of reduced sediment. These soft-sediment communities resemble those fuelled by chemoautotrophy in cold-seep settings. The aim of this study was to elucidate feeding strategies in these macrofaunal assemblages as part of a greater effort to understand the link between the inputs of terrestrially-derived OM and the chemosynthetic habitats. The biochemical composition of the sedimentary OM was first analysed in order to evaluate how nutritious the available particulate OM is for the benthic macrofauna. The terrestrial OM is already degraded when it reaches the final depositional area. However, high biopolymeric carbon contents (proteins, carbohydrates and lipids) are found in the channel of the recent lobe complex. In addition, about one to two thirds of the nitrogen can be assigned to peptide-like material. Even if this soil-derived OM is poorly digestible, turbiditic deposits contain such high amounts of organic carbon that there is enough biopolymeric carbon and proteacinous nitrogen to support dense benthic communities that contrast with the usual depauperate abyssal plains. Stable carbon and nitrogen isotopes and fatty acid biomarkers were then used to shed light on the feeding strategies allowing the energy transfer from the terrestrial OM brought by the turbidity currents to the abyssal food web. In the non-reduced sediment, surface detritivorous holothurians and suspension-feeding poriferans rely on detritic OM, thereby depending directly on the turbiditic deposits. The sulphur-oxidising symbiont bearing vesicomyids closely depend on the reprocessing of OM with methane and sulphide as final products. Their carbon and nitrogen isotopic signatures vary greatly among sites and could reflect the intensity of the anaerobic oxidation of methane (AOM) in the sediments. Within the vesicomyid habitats, the heterotrophic fauna exhibits a distinctively light carbon isotopic signature in comparison to the background sediments, clearly indicating the utilisation of chemosynthetically-derived OM. Fatty acid biomarkers further confirm that dorvilleid polychaetes consume aggregates that perform AOM. Terrestrial OM reprocessing by microbial consortium thus ensures its transfer to the benthic food web in the Congo deep-sea fan.

Spatial variation of sediment mineralization supports differential CO2 emissions from a tropical hydroelectric reservoir.

PubMed

Cardoso, Simone J; Vidal, Luciana O; Mendonça, Raquel F; Tranvik, Lars J; Sobek, Sebastian; Fábio, Roland

2013-01-01

Substantial amounts of organic matter (OM) from terrestrial ecosystems are buried as sediments in inland waters. It is still unclear to what extent this OM constitutes a sink of carbon, and how much of it is returned to the atmosphere upon mineralization to carbon dioxide (CO2). The construction of reservoirs affects the carbon cycle by increasing OM sedimentation at the regional scale. In this study we determine the OM mineralization in the sediment of three zones (river, transition, and dam) of a tropical hydroelectric reservoir in Brazil as well as identify the composition of the carbon pool available for mineralization. We measured sediment organic carbon mineralization rates and related them to the composition of the OM, bacterial abundance and pCO2 of the surface water of the reservoir. Terrestrial OM was an important substrate for the mineralization. In the river and transition zones most of the OM was allochthonous (56 and 48%, respectively) while the dam zone had the lowest allochthonous contribution (7%). The highest mineralization rates were found in the transition zone (154.80 ± 33.50 mg C m(-) (2) d(-) (1)) and the lowest in the dam (51.60 ± 26.80 mg C m(-) (2) d(-) (1)). Moreover, mineralization rates were significantly related to bacterial abundance (r (2) = 0.50, p < 0.001) and pCO2 in the surface water of the reservoir (r (2) = 0.73, p < 0.001). The results indicate that allochthonous OM has different contributions to sediment mineralization in the three zones of the reservoir. Further, the sediment mineralization, mediated by heterotrophic bacteria metabolism, significantly contributes to CO2 supersaturation in the water column, resulting in higher pCO2 in the river and transition zones in comparison with the dam zone, affecting greenhouse gas emission estimations from hydroelectric reservoirs.

The role of diatom resting spores in pelagic-benthic coupling in the Southern Ocean

NASA Astrophysics Data System (ADS)

Rembauville, Mathieu; Blain, Stéphane; Manno, Clara; Tarling, Geraint; Thompson, Anu; Wolff, George; Salter, Ian

2018-05-01

Natural iron fertilization downstream of Southern Ocean island plateaus supports large phytoplankton blooms and promotes carbon export from the mixed layer. In addition to sequestering atmospheric CO2, the biological carbon pump also supplies organic matter (OM) to deep-ocean ecosystems. Although the total flux of OM arriving at the seafloor sets the energy input to the system, the chemical nature of OM is also of significance. However, a quantitative framework linking ecological flux vectors to OM composition is currently lacking. In the present study we report the lipid composition of export fluxes collected by five moored sediment traps deployed in contrasting productivity regimes of Southern Ocean island systems (Kerguelen, Crozet and South Georgia) and compile them with quantitative data on diatom and faecal pellet fluxes. At the three naturally iron-fertilized sites, the relative contribution of labile lipids (mono- and polyunsaturated fatty acids, unsaturated fatty alcohols) is 2-4 times higher than at low productivity sites. There is a strong attenuation of labile components as a function of depth, irrespective of productivity. The three island systems also display regional characteristics in lipid export. An enrichment of zooplankton dietary sterols, such as C27Δ5, at South Georgia is consistent with high zooplankton and krill biomass in the region and the importance of faecal pellets to particulate organic carbon (POC) flux. There is a strong association of diatom resting spore fluxes that dominate productive flux regimes with energy-rich unsaturated fatty acids. At the Kerguelen Plateau we provide a statistical framework to link seasonal variation in ecological flux vectors and lipid composition over a complete annual cycle. Our analyses demonstrate that ecological processes in the upper ocean, e.g. resting spore formation and grazing, not only impact the magnitude and stoichiometry of the Southern Ocean biological pump, but also regulate the composition of exported OM and the nature of pelagic-benthic coupling.

Sources and atmospheric processing of size segregated aerosol particles revealed by stable carbon isotope ratios and chemical speciation.

PubMed

Masalaite, A; Holzinger, R; Ceburnis, D; Remeikis, V; Ulevičius, V; Röckmann, T; Dusek, U

2018-05-07

Size-segregated aerosol particles were collected during winter sampling campaigns at a coastal (55°37' N, 21°03'E) and an urban (54°64' N, 25°18' E) site. Organic compounds were thermally desorbed from the samples at different temperature steps ranging from 100 °C to 350 °C. The organic matter (OM) desorbed at each temperature step is analysed for stable carbon isotopes using an isotope ratio mass spectrometer (IRMS) and for individual organic compounds using a Proton Transfer Reaction Time-of-Flight Mass Spectrometer (PTR-MS). The OM desorbed at temperatures <200 °C was classified as less refractory carbon and the OM desorbed at temperatures between 200 °C and 350 °C was classified as more refractory carbon. At the coastal site, we identified two distinct time periods. The first period was more frequently influenced by marine air masses than the second time period, which was characterized by Easterly wind directions and continental air masses. During the first period OM contained a large fraction of hydrocarbons and had a carbon isotopic signature typical of liquid fossil fuels in the region. Organic mass spectra provide strong evidence that shipping emissions are a significant source of OM at this coastal site. The isotopic and chemical composition of OM during the second period at the coastal site was similar to the composition at the urban site. There was a clear distinction in source contribution between the less refractory OM and the more refractory OM at these sites. According to the source apportionment method used in this study, we were able to identify fossil fuel burning as predominant source of the less refractory OM in the smallest particles (D 50  < 0.18 μm), and biomass burning as predominant source of the more refractory OM in the larger size range (0.32 < D 50  < 1 μm). Copyright © 2018 Elsevier Ltd. All rights reserved.

Black carbon surface oxidation and organic composition of beech-wood soot aerosols

NASA Astrophysics Data System (ADS)

Corbin, J. C.; Lohmann, U.; Sierau, B.; Keller, A.; Burtscher, H.; Mensah, A. A.

2015-10-01

Soot particles are the most strongly light-absorbing particles commonly found in the atmosphere. They are major contributors to the radiative budget of the Earth and to the toxicity of atmospheric pollution. Atmospheric aging of soot may change its health- and climate-relevant properties by oxidizing the primary black carbon (BC) or organic particulate matter (OM) which, together with ash, comprise soot. This atmospheric aging, which entails the condensation of secondary particulate matter as well as the oxidation of the primary OM and BC emissions, is currently poorly understood. In this study, atmospheric aging of wood-stove soot aerosols was simulated in a continuous-flow reactor. The composition of fresh and aged soot particles was measured in real time by a dual-vaporizer aerosol-particle mass spectrometer (SP-AMS). The dual-vaporizer SP-AMS provided information on the OM and BC components of the soot as well as on refractory components internally mixed with BC. By switching the SP-AMS laser vaporizer off and using only the AMS thermal vaporizer (at 600 °C), information on the OM component only was obtained. In both modes, OM appeared to be generated largely by cellulose and/or hemicellulose pyrolysis and was only present in large amounts when new wood was added to the stove. In SP-AMS mode, BC signals otherwise dominated the mass spectrum. These signals consisted of ions related to refractory BC (rBC, C1-5+), oxygenated carbonaceous ions (CO1-2+), potassium (K+), and water (H2O+ and related fragments). The C4+ : C3+ ratio, but not the C1+ : C3+ ratio, was consistent with the BC-structure trends of Corbin et al. (2015c). The CO1-2+ signals likely originated from BC surface groups: upon aging, both CO+ and CO2+ increased relative to C1-3+ while CO2+ simultaneously increased relative to CO+. Factor analysis (positive matrix factorization) of SP-AMS and AMS data, using a modified error model to address peak-integration uncertainties, indicated that the surface composition of the BC was approximately constant across all stages of combustion for both fresh and aged samples. These results represent the first time-resolved measurements of in situ BC surface aging and suggest that the surface of beech-wood BC may be modelled as a single chemical species.

Organic matter compounds as source indicators and tracers for marine pollution in a western Mediterranean coastal zone.

PubMed

Amorri, Jalila; Geffroy-Rodier, Claude; Boufahja, Fehmi; Mahmoudi, Ezzeddine; Aïssa, Patricia; Ksibi, Mohamed; Amblès, André

2011-11-01

Complex organic compounds found in oil and sediments linked with a particular source (such as algae, bacteria or vascular plants) are defined as biomarkers and are useful dating indicators in organic geochemistry. This paper presents the composition of the organic matter (OM) on marine surface sediments from a degraded Tunisian coast analysed by pyrolysis and gas chromatography-mass spectrometry (GC-MS). High total OM contents (0.3-4.2%) were detected with high levels of saturated linear hydrocarbons. The aliphatic lipids had contributed with up to 11.7% of the total OM, and their distribution had consisted of resolved compounds (n-alkanes and fatty acid (FAs)) and an unresolved complex mixture. Hydrocarbons, primarily n-alkanes, were ranged from 368 to 3,886 μg g(-1). The FAs (674-2,568 μg g(-1)) were dominated by derived primary production, and the short chain FAs (C16 and C18) were the most abundant throughout. The ubiquitous presence of petroleum contamination, mainly from offshore oil exploration, discharge of pollutants from rivers, shipping activities and atmospheric deposition was found in all samples. The Gabès littoral seems to be quite to very polluted near the industrial zone of Ghannouch. The C/H ratio (generally around 5.9), the thermal analysis and GC-MS of n-alkanes and FAs showed that the OM in the studied area was composed of anthropogenic/petrogenic, marine and continental sources. Our study represents an innovative approach to assessing environmental pollution. The evaluation of organic matter by examination of sterols, alkanes and fatty acids allows the identification of source, both anthropogenic and natural.

Seasonal changes of organic matter quality and quantity at the outlet of a forested karst system (La Roche Saint Alban, French Alps)

NASA Astrophysics Data System (ADS)

Tissier, Grégory; Perrette, Yves; Dzikowski, Marc; Poulenard, Jérome; Hobléa, Fabien; Malet, Emmanuel; Fanget, Bernard

2013-03-01

SummaryBecause of its impact on water quality, organic matter (OM) in karst groundwater has been widely studied. The present article describes a method for monitoring OM in karst aquifers characterized by quick responses to rainfall. This method combines weekly manual sampling and continuous monitoring to provide, qualitative and quantitative information about OM flow. Weekly samples were analyzed for Total Organic Carbon (TOC) content and spectrofluorescence, while continuous monitoring was carried out at the main spring, using a field fluorimeter (310/400-700 nm and 280/300-600 nm) to quantify chromophoric organic matter (COM). The type and quantity of COM were defined by decomposing Excitation Emission Matrices (EEMs) and by applying a 2D fluorescence decomposition method. Continuous monitoring data showed that the dominant COM was humic-like (HL). We found three types of relationship between HL and discharge and between HL and TOC, showing that caution must be exercised when using field fluorimeter measurements to quantify TOC. Each relationship was characterized by global differences in OM content and by the presence of different percentages of non-chromophoric organic matter. These three relationships are associated with changes in hydrology and microorganism activity during the year. We used these relationships to estimate the annual OM flow (about 15 kg/ha/year) and thereby quantify OM flow during the year. Our results show the importance of the non-chromophoric organic matter in such estimation. That work illustrates the need to couple qualitative and quantitative monitoring of OM in karst spring to improve the global comprehension of karst system and of the sources implies in the OM flow.

Effects of Insect-Proof Net Cultivation, Rice-Duck Farming, and Organic Matter Return on Rice Dry Matter Accumulation and Nitrogen Utilization

PubMed Central

Liu, Xin; Xu, Guochun; Wang, Qiangsheng; Hang, Yuhao

2017-01-01

Insect-proof net cultivation (IPN), rice-duck farming (RD), and organic matter return (OM) are important methods to realize sustainable development of rice production. A split-plot field experiment was performed to study the effects of IPN, RD, and OM on the rice yield, dry matter accumulation and N utilization. Results showed that compared to inorganic N fertilizer (IN), wheat straw return, and biogas residue return increased the rice yield by 2.11–4.28 and 4.78–7.67%, respectively, and also improved dry matter and N accumulation after the elongation stage (EG), dry matter and N translocation, and N recovery efficiency (NRE). These results attributed to an increase in leaf SPAD values and net photosynthetic rate (Pn) after the EG. Compared to conventional rice farming (CR), RD promoted the rice yield by 1.52–3.74%, and contributed to higher the leaf photosynthesis, dry matter and N accumulation, dry matter and N translocation, and NRE. IPN decreased the intensity of sun radiation in the nets due to the coverage of the insect-proof nets, which declined the leaf Pn, dry matter accumulation and translocation, N absorption and translocation, and NRE compared to open field cultivation (OFC). The rice yield of IPN were 2.48–4.98% lower than that of OFC. Compared to the interaction between CR and IN, the interaction between RD and OM improved the rice yield by 5.26–9.33%, and increased dry matter and N accumulation after the EG, dry matter and N translocation, and NRE. These results indicated that OM, RD and the interaction between RD and OM could promote dry matter accumulation and N utilization, which was beneficial to improve the rice yield. PMID:28174589

The source and distribution of thermogenic dissolved organic matter in the ocean

NASA Astrophysics Data System (ADS)

Dittmar, T.; Suryaputra, I. G. N. A.; Paeng, J.

2009-04-01

Thermogenic organic matter (ThOM) is abundant in the environment. ThOM is produced at elevated temperature and pressure in deep sediments and earth's crust, and it is also a residue of fossil fuel and biomass burning ("black carbon"). Because of its refractory character, it accumulates in soils and sediments and, therefore, may sequester carbon from active cycles. It was hypothesized that a significant component of marine dissolved organic matter (DOM) might be thermogenic. Here we present a detailed data set on the distribution of thermogenic DOM in major water masses of the deep and surface ocean. In addition, several potential sources of thermogenic DOM to the ocean were investigated: active seeps of brine fluids in the deep Gulf of Mexico, rivers, estuaries and submarine groundwaters. Studies on deep-sea hydrothermal vents and aerosol deposition are ongoing. All DOM samples were isolated from seawater via solid phase extraction (SPE-DOM). ThOM was quantified in the extracts as benzene-polycarboxylic acids (BPCAs) after nitric acid oxidation via high-performance liquid chromatography and diode array detection (HPLC-DAD). BPCAs are produced exclusively from fused ring systems and are therefore unambiguous molecular tracers for ThOM. In addition to BPCA determination, the molecular composition and structure of ThOM was characterized in detail via ultrahigh resolution mass spectrometry (FT-ICR-MS). All marine and river DOM samples yielded significant amounts of BPCAs. The cold seep system in the deep Gulf of Mexico, but also black water rivers (like the Suwannee River) were particularly rich in ThOM. Up to 10% of total dissolved organic carbon was thermogenic in both systems. The most abundant BPCA was benzene-pentacarboxylic acid (B5CA). The molecular composition of BPCAs and the FT-ICR-MS data indicate a relatively small number (5-8) of fused aromatic rings per molecule. Overall, the molecular BPCA patterns were very similar independent of the source of ThOM. Petroleum-derived ThOM in the deep Gulf of Mexico had very similar structures than fused ring systems in asphaltenes, but also ThOM in the rivers and groundwaters was similar. First data on aerosols, on the other had, show a clear difference between particulate and dissolved samples. ThOM from aerosols and most soils was characterized by an abundance of benzene-hexacarboxylic acid (B6CA), different from thermogenic DOM. Dissolution processes may cause partial breakdown of larger fused ring systems and thus cause similar structural units in all DOM samples. In the deep ocean, the distribution of thermogenic DOM was relatively homogeneous throughout the water column. The concentration of carbon that resides in thermogenic polycyclic aromatic hydrocarbon varied between 610 and 800 nM (1.5-2% of total dissolved organic carbon). The total amount of thermogenic DOM in the deep ocean is approx. one Peta mole carbon globally. The relatively homogenous distribution of thermogenic DOM in the abyssal ocean indicates that thermogenic DOM behaves virtually inert in the abyssal environment. One of the most striking features is that the oldest water masses, which are not enriched in industrial products (such as the Freon CFC-12) showed highest concentrations of thermogenic DOM. The younger water masses such as Antarctic bottom and intermediate waters are not particularly enriched in thermogenic DOM. This distribution suggests a preindustrial origin of ThOM in the deep ocean. Rivers and deep-sea seep systems were both identified as potential sources of ThOM to the deep ocean. Radiocarbon dating on BPCAs will provide further evidence for the origin of BC in the deep ocean.

Little effects on soil organic matter chemistry of density fractions after seven years of forest soil warming.

PubMed

Schnecker, Jörg; Borken, Werner; Schindlbacher, Andreas; Wanek, Wolfgang

2016-12-01

Rising temperatures enhance microbial decomposition of soil organic matter (SOM) and thereby increase the soil CO 2 efflux. Elevated decomposition rates might differently affect distinct SOM pools, depending on their stability and accessibility. Soil fractions derived from density fractionation have been suggested to represent SOM pools with different turnover times and stability against microbial decomposition. To investigate the effect of soil warming on functionally different soil organic matter pools, we here investigated the chemical and isotopic composition of bulk soil and three density fractions (free particulate organic matter, fPOM; occluded particulate organic matter, oPOM; and mineral associated organic matter, MaOM) of a C-rich soil from a long-term warming experiment in a spruce forest in the Austrian Alps. At the time of sampling, the soil in this experiment had been warmed during the snow-free period for seven consecutive years. During that time no thermal adaptation of the microbial community could be identified and CO 2 release from the soil continued to be elevated by the warming treatment. Our results, which included organic carbon content, total nitrogen content, δ 13 C, Δ 14 C, δ 15 N and the chemical composition, identified by pyrolysis-GC/MS, showed no significant differences in bulk soil between warming treatment and control. Surprisingly, the differences in the three density fractions were mostly small and the direction of warming induced change was variable with fraction and soil depth. Warming led to reduced N content in topsoil oPOM and subsoil fPOM and to reduced relative abundance of N-bearing compounds in subsoil MaOM. Further, warming increased the δ 13 C of MaOM at both sampling depths, reduced the relative abundance of carbohydrates while it increased the relative abundance of lignins in subsoil oPOM. As the size of the functionally different SOM pools did not significantly change, we assume that the few and small modifications in SOM chemistry result from an interplay of enhanced microbial decomposition of SOM and increased root litter input in the warmed plots. Overall, stable functional SOM pool sizes indicate that soil warming had similarly affected easily decomposable and stabilized SOM of this C-rich forest soil.

Dynamic Bubble Surface Tension Measurements in Northwest Atlantic Seawater

NASA Astrophysics Data System (ADS)

Kieber, D. J.; Long, M. S.; Keene, W. C.; Kinsey, J. D.; Frossard, A. A.; Beaupre, S. R.; Duplessis, P.; Maben, J. R.; Lu, X.; Chang, R.; Zhu, Y.; Bisgrove, J.

2017-12-01

Numerous reports suggest that most organic matter (OM) associated with newly formed primary marine aerosol (PMA) originates from the sea-surface microlayer. However, surface-active OM rapidly adsorbs onto bubble surfaces in the water column and is ejected into the atmosphere when bubbles burst at the air-water interface. Here we present dynamic surface tension measurements of bubbles produced in near surface seawater from biologically productive and oligotrophic sites and in deep seawater collected from 2500 m in the northwest Atlantic. In all cases, the surface tension of bubble surfaces decreased within seconds after the bubbles were exposed to seawater. These observations demonstrate that bubble surfaces are rapidly saturated by surfactant material scavenged from seawater. Spatial and diel variability in bubble surface evolution indicate corresponding variability in surfactant concentrations and/or composition. Our results reveal that surface-active OM is found throughout the water column, and that at least some surfactants are not of recent biological origin. Our results also support the hypothesis that the surface microlayer is a minor to negligible source of OM associated with freshly produced PMA.

Linking Intra-Aggregate Pore Size Distribution with Organic Matter Decomposition Status, Evidence from FTIR and X-Ray Tomography

NASA Astrophysics Data System (ADS)

Toosi, E. R.; Quigley, M.; Kravchenko, A. N.

2014-12-01

It has been reported that conversion of intensively cultivated lands to less disturbed systems enhances soil OM storage capacity, primarily through OM stabilization in macroaggregates. We hypothesized that the potential for OM stabilization inside macro-aggregates is influenced by presence and abundance of intra-aggregate pores. Pores determine microbial access to OM and regulate diffusion of solution/gases within aggregates which drives microbial functioning. We investigated the influence of longterm disturbance intensity on soil OM composition and its relation to pore size distribution within macroaggregates. We used quantitative FTIR to determine OM decomposition status and X-ray micro-tomography to assess pore size distribution in macroaggregates as affected by management and landuse. Macroaggregates 4-6 mm in size where selected from topsoil under long term conventional tillage (CT), cover-crop (CC), and native succession vegetation (NS) treatments at Kellogg Biological Station, Michigan. Comparison of main soil OM functional groups suggested that with increasing disturbance intensity, the proportion of aromatic and carboxylic/carbohydrates associated compounds increased and it was concomitant with a decrease in the proportion of aliphatic associated compounds and lignin derivatives. Further, FTIR-based decomposition indices revealed that overall decomposition status of macroaggregates followed the pattern of CT > CC ≈ NS. X-ray micro-tomography findings suggested that greater OM decomposition within the macroaggregates was associated with i) greater percent of pores >13 micron in size within the aggregates, as well as ii) greater proportion of small to medium pores (13-110 micron). The results develop previous findings, suggesting that shift in landuse or management indirectly affects soil OM stabilization through alteration of pore size distribution within macroaggregates that itself, is coupled with OM decomposition status.

Comparison of three different wastewater sludge and their respective drying processes: Solar, thermal and reed beds - Impact on organic matter characteristics.

PubMed

Collard, Marie; Teychené, Benoit; Lemée, Laurent

2017-12-01

Drying process aims at minimising the volume of wastewater sludge (WWS) before disposal, however it can impact sludge characteristics. Due to its high content in organic matter (OM) and lipids, sludge are mainly valorised by land farming but can also be considered as a feedstock for biodiesel production. As sludge composition is a major parameter for the choice of disposal techniques, the objective of this study was to determine the influence of the drying process. To reach this goal, three sludges obtained from solar, reed beds and thermal drying processes were investigated at the global and molecular scales. Before the drying step the sludges presented similar physico-chemical (OM content, elemental analysis, pH, infrared spectra) characteristics and lipid contents. A strong influence of the drying process on lipids and humic-like substances contents was observed through OM fractionation. Thermochemolysis-GCMS of raw sludge and lipids revealed similar molecular content mainly constituted with steroids and fatty acids. Molecular changes were noticeable for thermal drying through differences in branched to linear fatty acids ratio. Finally the thermal drying induced a weakening of OM whereas the solar drying led to a complexification. These findings show that smooth drying processes such as solar or reed-beds are preferable for amendment production whereas thermal process leads to pellets with a high lipid content which could be considered for fuel production. Copyright © 2016 Elsevier Ltd. All rights reserved.

How depositional conditions control input, composition, and degradation of organic matter in sediments from the Chilean coastal upwelling region

NASA Astrophysics Data System (ADS)

Niggemann, Jutta; Ferdelman, Timothy G.; Lomstein, Bente Aa.; Kallmeyer, Jens; Schubert, Carsten J.

2007-03-01

In a comprehensive study, we compared depositional conditions, organic matter (OM) composition, and organic carbon turnover in sediments from two different depositional systems along the Chilean continental margin: at ˜23° S off Antofagasta and at ˜36° S off Concepción. Both sites lie within the Chilean coastal upwelling system and have an extended oxygen minimum zone in the water column. However, the northern site (23° S) borders the Atacama Desert, while the southern site (36° S) has a humid hinterland. Eight surface sediment cores (up to 30 cm long) from water depths of 126-1350 m were investigated for excess 210Pb ( 210Pb xs) activity, total organic and total inorganic carbon concentrations (TOC and TIC, respectively), C/N-ratios, organic carbon isotopic compositions (δ 13C), chlorin concentrations, Chlorin Indices (CI), and sulfate reduction rates (SRR). Sediment accumulation rates obtained from 210Pb-analysis were similar in both regions (0.04-0.15 cm yr -1 at 23° S, 0.10-0.19 cm yr -1 at 36° S), although total 210Pb xs fluxes indicated that the vertical particle flux was higher at 36° S than at 23° S. We propose that sediment focusing in isolated deposition centers led to high sediment accumulation rates at 23° S. Furthermore, there were no indications for sediment mixing at 23° S, while bioturbation was intense at 36° S. δ 13C-values (-24.5‰ to -20.1‰ vs. VPDB) and C/N-ratios (molar, 8.6-12.8) were characteristic of a predominantly marine origin of the sedimentary OM in both investigated areas. The extent of OM alteration in the water column was partly reflected in the surface sediments as chlorin concentrations decreased and C/N-ratios and CI increased with increasing water depth of the sampling site. SRR were lower at 23° S (areal SRR 0.12-0.60 mmol m -2 d -1) than at 36° S (areal SRR 0.82-1.18 mmol m -2 d -1), which was partly due to the greater water depth of most of the sediments investigated in the northern region and consistent with a lower quality of the sedimentary OM at 23° S. Reaction rate constants for TOC degradation that were obtained from measured SRR ( kSRR; 0.0004-0.0022 yr -1) showed a good correspondence to kTOC that were derived from the depth profiles of TOC (0.0003-0.0014 yr -1). Both, kSRR and kTOC, reflect differences in OM composition. At 36° S they were related to the degradation state of bulk OM (represented by C/N-ratios), whereas near 23° S they were related to the freshness of a small fraction of labile OM (represented by CI). Our study shows that although rates of organic carbon accumulation were similar in both investigated sites, the extent and kinetics of organic carbon degradation were closely linked to differing depositional conditions.

Microbial Communities and Organic Matter Composition in Surface and Subsurface Sediments of the Helgoland Mud Area, North Sea

PubMed Central

Oni, Oluwatobi E.; Schmidt, Frauke; Miyatake, Tetsuro; Kasten, Sabine; Witt, Matthias; Hinrichs, Kai-Uwe; Friedrich, Michael W.

2015-01-01

The role of microorganisms in the cycling of sedimentary organic carbon is a crucial one. To better understand relationships between molecular composition of a potentially bioavailable fraction of organic matter and microbial populations, bacterial and archaeal communities were characterized using pyrosequencing-based 16S rRNA gene analysis in surface (top 30 cm) and subsurface/deeper sediments (30–530 cm) of the Helgoland mud area, North Sea. Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FT-ICR MS) was used to characterize a potentially bioavailable organic matter fraction (hot-water extractable organic matter, WE-OM). Algal polymer-associated microbial populations such as members of the Gammaproteobacteria, Bacteroidetes, and Verrucomicrobia were dominant in surface sediments while members of the Chloroflexi (Dehalococcoidales and candidate order GIF9) and Miscellaneous Crenarchaeota Groups (MCG), both of which are linked to degradation of more recalcitrant, aromatic compounds and detrital proteins, were dominant in subsurface sediments. Microbial populations dominant in subsurface sediments (Chloroflexi, members of MCG, and Thermoplasmata) showed strong correlations to total organic carbon (TOC) content. Changes of WE-OM with sediment depth reveal molecular transformations from oxygen-rich [high oxygen to carbon (O/C), low hydrogen to carbon (H/C) ratios] aromatic compounds and highly unsaturated compounds toward compounds with lower O/C and higher H/C ratios. The observed molecular changes were most pronounced in organic compounds containing only CHO atoms. Our data thus, highlights classes of sedimentary organic compounds that may serve as microbial energy sources in methanic marine subsurface environments. PMID:26635758

Experimental evidence for an effect of early-diagenetic interaction between labile and refractory marine sedimentary organic matter on nitrogen dynamics

NASA Astrophysics Data System (ADS)

Turnewitsch, Robert; Domeyer, Bettina; Graf, Gerhard

2007-05-01

In most natural sedimentary systems labile and refractory organic material (OM) occur concomitantly. Little, however, is known on how different kinds of OM interact and how such interactions affect early diagenesis in sediments. In a simple sediment experiment, we investigated how interactions of OM substrates of different degradability affect benthic nitrogen (N) dynamics. Temporal evolution of a set of selected biogeochemical parameters was monitored in sandy sediment over 116 days in three experimental set-ups spiked with labile OM (tissue of Mytilus edulis), refractory OM (mostly aged Zostera marina and macroalgae), and a 1:1 mixture of labile and refractory OM. The initial amounts of particulate organic carbon (POC) were identical in the three set-ups. To check for non-linear interactions between labile and refractory OM, the evolution of the mixture system was compared with the evolution of the simple sum of the labile and refractory systems, divided by two. The sum system is the experimental control where labile and refractory OM are virtually combined but not allowed to interact. During the first 30 days there was evidence for net dissolved-inorganic-nitrogen (DIN) production followed by net DIN consumption. (Here 'DIN' is the sum of ammonium, nitrite and nitrate.) After ˜ 30 days a quasi steady state was reached. Non-linear interactions between the two types of OM were reflected by three main differences between the early-diagenetic evolutions of nitrogen dynamics of the mixture and sum (control) systems: (1) In the mixture system the phases of net DIN production and consumption commenced more rapidly and were more intense. (2) The mixture system was shifted towards a more oxidised state of DIN products [as indicated by increased (nitrite + nitrate)/(ammonium) ratios]. (3) There was some evidence that more OM, POC and particulate nitrogen were preserved in the mixture system. That is, in the mixture system more particulate OM was preserved while a higher proportion of the decomposed particulate N was converted into inorganic N. It can be concluded that during the first days and weeks of early diagenesis the magnitude and composition of the flux of decompositional dissolved N-compounds from sediments into the overlying water was influenced by non-linear interactions of OM substrates of different degradability. Given these experimental results it is likely that the relative spatial distributions of OM of differing degradability in sediments control the magnitude and composition of the return flux of dissolved N-bearing compounds from sediments into the overlying water column.

Characteristics of sedimentary organic matter in coastal and depositional areas in the Baltic Sea

NASA Astrophysics Data System (ADS)

Winogradow, A.; Pempkowiak, J.

2018-05-01

As organic matter (OM) is readily mineralized to carbon dioxide (Smith and Hollibangh, 1993; Emerson and Hedges, 2002; Szymczycha et al., 2017) it has a direct link to the carbon dioxide abundance in seawater and an indirect influence on the carbon dioxide concentration in the atmosphere (Emerson and Hedges, 2002; Schulz and Zabel, 2006). OM is a quantitatively minor yet important component of seawater. OM in seawater can originate from internal sources (marine, or planktonic, or autochthonous OM) or external sources (terrestrial, or allochtonous OM) (Maksymowska et al., 2000; Emerson and Hedges, 2002; Turnewitsch et al., 2007; Arndt et al., 2013). It is commonly divided into two fractions: dissolved (DOM) and particulate (POM). Organic carbon (OC) is, most often, used as a measure of OM.

Structural analysis of aerosol particles by microscopic observation using a time-of-flight secondary ion mass spectrometer

NASA Astrophysics Data System (ADS)

Takami, Akinori; Mayama, Norihito; Sakamoto, Tetsuo; Ohishi, Kenji; Irei, Satoshi; Yoshino, Ayako; Hatakeyama, Shiro; Murano, Kentaro; Sadanaga, Yasuhiro; Bandow, Hiroshi; Misawa, Kentaro; Fujii, Masaaki

2013-06-01

The chemical composition and structure of fine aerosol particles with diameters of less than 1 µm were analyzed in the spring of 2011 at Fukue Island, Japan, using an aerosol quadrupole mass spectrometer (Q-AMS, Aerodyne Research, Inc.) and a time-of-flight secondary ion mass spectrometer (TOF-SIMS). The Q-AMS results were similar to those of previous studies conducted at the same location, suggesting that the composition we observed is typical of this site. Based on the TOF-SIMS results, we classified the fine aerosol particles into three types: Type A, in which sulfate was covered with organic matter (OM); Type B, in which soil-containing particles with a diameter of 0.5 µm were associated with sulfate and OM; and Type C, in which black carbon (BC) and sulfate aggregates were associated with OM. During the observation period, the relative abundances of Type A, B, and C particles were 55%, 20%, and 25%, respectively. The structure, chemical composition, and the proportion of each type of particles provide information for a more representative particle model in radiative models. The relative abundance of Type C, i.e., BC-containing particles, is quite different to that in Tokyo, suggesting that Type C could be an indicator of transboundary air pollution, in this case from mainland China.

Revisiting the concept of recalcitrance and organic matter persistence in soils and aquatic systems: Does environment trump chemistry?

NASA Astrophysics Data System (ADS)

Marin-Spiotta, E.

2014-12-01

Most ecological models of decomposition rely on plant litter chemistry. However, growing evidence suggests that the chemical composition of organic matter (OM) is not a good predictor of its eventual fate in terrestrial or aquatic environments. New data on variable decomposition rates of select organic compounds challenge concepts of chemical recalcitrance, i.e. the inherent ability of certain molecular structures to resist biodegradation. The role of environmental or "ecosystem" properties on influencing decomposition dates back to some of the earliest research on soil OM. Despite early recognition that the physical and aqueous matrices are critical in determining the fate of organic compounds, the prevailing paradigm hinges on intrinsic chemical properties as principal predictors of decay rate. Here I build upon recent reviews and discuss new findings that contribute to three major transformations in our understanding of OM persistence: (1) a shift away from an emphasis on chemical recalcitrance as a primary predictor of turnover, (2) new interpretations of radiocarbon ages which challenge predictions of reactivity, and (3) the recognition that most detrital OM accumulating in soils and in water has been microbially processed. Predictions of OM persistence due to aromaticity are challenged by high variability in lignin and black C turnover observed in terrestrial and aquatic environments. Contradictions in the behavior of lignin are, in part, influenced by inconsistent methodologies among research communities. Even black C, long considered to be one of the most recalcitrant components of OM, is susceptible to biodegradation, challenging predictions of the stability of aromatic structures. At the same time, revised interpretations of radiocarbon data suggest that organic compounds can acquire long mean residence times by various mechanisms independent of their molecular structure. Understanding interactions between environmental conditions and biological reactivity can improve predictions of how disturbance events can further stabilize or destabilize organic C pools, with implications for terrestrial C storage, aquatic C cycling, and climate change.

An ultrahigh-resolution mass spectrometry index to estimate natural organic matter lability

PubMed Central

D'Andrilli, Juliana; Cooper, William T; Foreman, Christine M; Marshall, Alan G

2015-01-01

Rationale Determining the chemical constituents of natural organic matter (NOM) by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FTICRMS) remains the ultimate measure for probing its source material, evolution, and transport; however, lability and the fate of organic matter (OM) in the environment remain controversial. FTICRMS-derived elemental compositions are presented in this study to validate a new interpretative method to determine the extent of NOM lability from various environments. Methods FTICRMS data collected over the last decade from the same 9.4 tesla instrument using negative electrospray ionization at the National High Magnetic Field Laboratory in Tallahassee, Florida, was used to validate the application of a NOM lability index. Solid-phase extraction cartridges were used to isolate the NOM prior to FTICRMS; mass spectral peaks were calibrated internally by commonly identified NOM homologous series, and molecular formulae were determined for NOM composition and lability analysis. Results A molecular lability boundary (MLB) was developed from the FTICRMS molecular data, visualized from van Krevelen diagrams, dividing the data into more and less labile constituents. NOM constituents above the MLB at H/C ≥1.5 correspond to more labile material, whereas NOM constituents below the MLB, H/C <1.5, exhibit less labile, more recalcitrant character. Of all marine, freshwater, and glacial environments considered for this study, glacial ecosystems were calculated to contain the most labile OM. Conclusions The MLB extends our interpretation of FTICRMS NOM molecular data to include a metric of lability, and generally ranked the OM environments from most to least labile as glacial > marine > freshwater. Applying the MLB is useful not only for individual NOM FTICRMS studies, but also provides a lability threshold to compare and contrast molecular data with other FTICRMS instruments that survey NOM from around the world. Copyright © 2015 The Authors. Rapid Communications in Mass Spectrometry published by John Wiley & Sons Ltd. PMID:26563709

Comparative geochemistry of Indian margin (Arabian Sea) sediments: Estuary to continental slope.

NASA Astrophysics Data System (ADS)

Cowie, Greg; Mowbray, Stephen; Kurian, Siby; Sarkar, Amit; White, Carol; Anderson, Amy; Vergnaud, Bianca; Johnstone, Gisele; Brear, Samuel; Woulds, Clare; Naqvi, Wajih; Kitazato, Hiroshi

2014-05-01

Factors controlling the distribution of organic matter in the Arabian Sea have been the subject of much research and debate ever since organic-rich slope deposits were associated with the mid-water oxygen minimum zone (OMZ) However, the debate remains open, and numerous interacting factors have been invoked as important controls. A limitation of most previous studies is that they have been restricted to limited portions of the margin, and have not included molecular-level tracers that allow distinction of organic matter (OM) source and degradation state as factors in OM distribution. We report results from sites across the Indian margin of the Arabian Sea, which were analysed for carbon and nitrogen compositions (elemental and isotopic), grain size and indices of OM source and degradation state. Site locations ranged from the Mandovi/Zuari estuaries to depths of ~2000m on the continental slope, thus spanning both the semi-permanent OMZ on the upper slope (~200-1300m) and the seasonal hypoxic zone that impinges on the shelf. Source indices showed mixed marine and terrigenous OM within the estuaries, but overwhelming predominance (80%+) of marine OM on the shelf and slope, even in nearshore deposits. Thus, riverine OM is heavily diluted or efficiently remineralised within or immediately offshore of the estuaries. Any terrigenous OM that is exported appears to be retained in nearshore muds; lignin phenols indicate that the small terrigenous OM content of slope sediments is of different origin, potentially from rivers to the north. Organic C contents of surface shelf and slope sediments varied from <0.5 wt% in relict shelf sands to a maximum of >7 wt% at upper slope sites within the OMZ, then decreasing to ≤1wt% at 2000m. However, major variability (~5 wt%) occured within the OMZ at sites with near-identical depths and bottom-water oxygen. A strong relationship between organic C and grain size was seen for OMZ sediments, but lower C loadings were found for sites on the shelf and below the OMZ. Diagenetic indices confirmed that lower C content below the OMZ is associated with greater extent of OM degradation, but that C-poor shelf sediments are not consistently more degraded than those within the OMZ. Together, results indicate that OM enrichment on the upper slope, where it occurs, can be explained by winnowing or other physical processes on the shelf combined with progressive OM degradation with increasing oxygen exposure below the OMZ. Reduced oxygen exposure may contribute to observed OM enrichment with the OMZ, but hydrodynamic processes are the overriding control on sediment OM distribution, even within the OMZ.

Organic matter dynamics along a salinity gradient in Siberian steppe soils

NASA Astrophysics Data System (ADS)

Bischoff, Norbert; Mikutta, Robert; Shibistova, Olga; Dohrmann, Reiner; Herdtle, Daniel; Gerhard, Lukas; Fritzsche, Franziska; Puzanov, Alexander; Silanteva, Marina; Grebennikova, Anna; Guggenberger, Georg

2018-01-01

Salt-affected soils will become more frequent in the next decades as arid and semiarid ecosystems are predicted to expand as a result of climate change. Nevertheless, little is known about organic matter (OM) dynamics in these soils, though OM is crucial for soil fertility and represents an important carbon sink. We aimed at investigating OM dynamics along a salinity and sodicity gradient in the soils of the southwestern Siberian Kulunda steppe (Kastanozem, non-sodic Solonchak, Sodic Solonchak) by assessing the organic carbon (OC) stocks, the quantity and quality of particulate and mineral-associated OM in terms of non-cellulosic neutral sugar contents and carbon isotopes (δ13C, 14C activity), and the microbial community composition based on phospholipid fatty acid (PLFA) patterns. Aboveground biomass was measured as a proxy for plant growth and soil OC inputs. Our hypotheses were that (i) soil OC stocks decrease along the salinity gradient, (ii) the proportion and stability of particulate OM is larger in salt-affected Solonchaks compared to non-salt-affected Kastanozems, (iii) sodicity reduces the proportion and stability of mineral-associated OM, and (iv) the fungi : bacteria ratio is negatively correlated with salinity. Against our first hypothesis, OC stocks increased along the salinity gradient with the most pronounced differences between topsoils. In contrast to our second hypothesis, the proportion of particulate OM was unaffected by salinity, thereby accounting for only < 10 % in all three soil types, while mineral-associated OM contributed > 90 %. Isotopic data (δ13C, 14C activity) and neutral sugars in the OM fractions indicated a comparable degree of OM transformation along the salinity gradient and that particulate OM was not more persistent under saline conditions. Our third hypothesis was also rejected, as Sodic Solonchaks contained more than twice as much mineral-bound OC than the Kastanozems, which we ascribe to the flocculation of OM and mineral components under higher ionic strength conditions. Contrary to the fourth hypothesis, the fungi : bacteria ratio in the topsoils remained fairly constant along the salinity gradient. A possible explanation for why our hypotheses were not affirmed is that soil moisture covaried with salinity along the transect, i.e., the Solonchaks were generally wetter than the Kastanozems. This might cause comparable water stress conditions for plants and microorganisms, either due to a low osmotic or a low matric potential and resulting in (i) similar plant growth and hence soil OC inputs along the transect, (ii) a comparable persistence of particulate OM, and (iii) unaffected fungi : bacteria ratios. We conclude that salt-affected soils contribute significantly to the OC storage in the semiarid soils of the Kulunda steppe, while most of the OC is associated with minerals and is therefore effectively sequestered in the long term.

Effects of effluent organic matter characteristics on the removal of bulk organic matter and selected pharmaceutically active compounds during managed aquifer recharge: Column study

NASA Astrophysics Data System (ADS)

Maeng, Sung Kyu; Sharma, Saroj K.; Abel, Chol D. T.; Magic-Knezev, Aleksandra; Song, Kyung-Guen; Amy, Gary L.

2012-10-01

Soil column experiments were conducted to investigate the effects of effluent organic matter (EfOM) characteristics on the removal of bulk organic matter (OM) and pharmaceutically active compounds (PhACs) during managed aquifer recharge (MAR) treatment processes. The fate of bulk OM and PhACs during an MAR is important to assess post-treatment requirements. Biodegradable OM from EfOM, originating from biological wastewater treatment, was effectively removed during soil passage. Based on a fluorescence excitation-emission matrix (F-EEM) analysis of wastewater effluent-dominated (WWE-dom) surface water (SW), protein-like substances, i.e., biopolymers, were removed more favorably than fluorescent humic-like substances under oxic compared to anoxic conditions. However, there was no preferential removal of biopolymers or humic substances, determined as dissolved organic carbon (DOC) observed via liquid chromatography with online organic carbon detection (LC-OCD) analysis. Most of the selected PhACs exhibited removal efficiencies of greater than 90% in both SW and WWE-dom SW. However, the removal efficiencies of bezafibrate, diclofenac and gemfibrozil were relatively low in WWE-dom SW, which contained more biodegradable OM than did SW (copiotrophic metabolism). Based on this study, low biodegradable fractions such as humic substances in MR may have enhanced the degradation of diclofenac, gemfibrozil and bezafibrate by inducing an oligotrophic microbial community via long term starvation. Both carbamazepine and clofibric acid showed persistent behaviors and were not influenced by EfOM.

Biomarkers reveal the effects of hydrography on the sources and fate of marine and terrestrial organic matter in the western Irish Sea

NASA Astrophysics Data System (ADS)

O'Reilly, Shane S.; Szpak, Michal T.; Flanagan, Paul V.; Monteys, Xavier; Murphy, Brian T.; Jordan, Sean F.; Allen, Christopher C. R.; Simpson, Andre J.; Mulligan, Stephen M.; Sandron, Sara; Kelleher, Brian P.

2014-01-01

A suite of lipid biomarkers were investigated from surface sediments and particulate matter across hydrographically distinct zones associated with the western Irish Sea gyre and the seasonal bloom. The aim was to assess the variation of organic matter (OM) composition, production, distribution and fate associated with coastal and southern mixed regions and also the summer stratified region. Based on the distribution of a suite of diagnostic biomarkers, including phospholipid fatty acids, source-specific sterols, wax esters and C25 highly branched isoprenoids, diatoms, dinoflagellates and green algae were identified as major contributors of marine organic matter (MOM) in this setting. The distribution of cholesterol, wax esters and C20 and C22 polyunsaturated fatty acids indicate that copepod grazing represents an important process for mineralising this primary production. Net tow data from 2010 revealed much greater phytoplankton and zooplankton biomass in well-mixed waters compared to stratified waters. This appears to be largely reflected in MOM input to surface sediments. Terrestrial organic matter (TOM), derived from higher plants, was identified as a major source of OM regionally, but was concentrated in proximity to major riverine input at the Boyne Estuary and Dundalk Bay. Near-bottom residual circulation and the seasonal gyre also likely play a role in the fate of TOM in the western Irish Sea.

Terrestrial bitumen analogue of orgueil organic material demonstrates high sensitivity to usual HF-HCl treatment

NASA Technical Reports Server (NTRS)

Korochantsev, A. V.; Nikolaeva, O. V.

1993-01-01

The relationship between the chemical composition and the interlayer spacing (d002) of organic materials (OM's) is known for various terrestrial OM's. We improved this general trend by correlation with corresponding trend of natural solid bitumens (asphaltite-kerite-anthraxolite) up to graphite. Using the improved trend we identified bitumen analogs of carbonaceous chondrite OM's residued after HF-HCl treatment. Our laboratory experiment revealed that these analogs and, hence, structure and chemical composition of carbonaceous chondrite OM's are very sensitive to the HF-HCl treatment. So, usual extraction of OM from carbonaceous chondrites may change significantly structural and chemical composition of extracted OM.

Mineralization of organic-matter labile fragments in the humus-accumulative horizon of soddy-podzolic soil

NASA Astrophysics Data System (ADS)

Trofimov, S. Ya.; Lazarev, A. S.; Fokin, A. D.

2012-12-01

The mineralization rate of the 14C-labeled organic matter (OM) in the humus-accumulative AE horizon of a soddy-podzolic soil was determined in a laboratory experiment. The labeling was performed in a field experiment when microamounts of 14C-labeled glucose, glycine, and uracil were added to tree waste in sacks embedded in the upper layer of the forest litter. Samples containing 14C were taken from the AE horizon (above which the sacks with the labeled material were placed) 7 and 20 months after the beginning of the experiment. The soil samples were wetted to a water content corresponding to ˜80% of the total water capacity and placed in hermetic vessels containing vials with a periodically renewed alkali solution. The incubation was performed at room temperature for 3.5 months; the alkali solutions in the vials were replaced and titrated 12 times during this period. Mineralization curves were plotted from the amounts of carbon dioxide absorbed by a 0.3 N NaOH solution, which were calculated for each time interval; its 14C content was determined by the scintillation method. The experimental treatments also included the determination of the OM mineralization rate in material from the AE horizon pretreated with a heavy liquid or a heavy liquid and a 0.1 N NaOH solution. The differences between the mineralization rates of the labeled organic matter applied to the soil in the form of glucose, glycine, and uracil under the field conditions after the interaction for 7 and 20 months were revealed. The changes in the mineralization rate after the successive extraction of the labile organic matter with a heavy liquid and a 0.1 N NaOH solution were studied. It was shown that the transformation of the labeled low-molecular-weight organic compounds in the soil over 20 months included their strong inclusion into the humus composition, which was confirmed by the similar values of the mineralization constants of the native and 14C-labeled OM. In addition, the treatments with the heavy liquid or the heavy liquid and the NaOH solution had almost identical effects on the mineralization of the native and 14C-labeled OM. The mineralization constants of the native and 14C-labeled OM in the samples taken after 7 months of the field experiment differed significantly.

The microbial perspective of organic matter turnover and nutrient cycling in tropical soils

NASA Astrophysics Data System (ADS)

Rasche, Frank

2017-04-01

A primary goal of low-input small-holder farming systems in the tropics is the appropriate management of organic matter (OM) turnover and nutrient cycling via adapted agricultural practices. These emphasize the promotion of soil organic matter (SOM) turnover and carbon (C) sequestration, nutrient use efficiency and soil microbial activity. Since soil microbial communities are acknowledged as key players in the terrestrial C and nutrient (e.g., nitrogen (N), phosphorus (P)) cycles, they may respond sensitively to agricultural management with shifts in their community structure as well as functional traits (i.e., decomposition, mineralization). This may be in particular evident for tropical, agricultural soils which show an accelerated microbial decomposition activity induced by favourable climatic and unique physico-chemical soil conditions. While modern molecular techniques advanced primarily the understanding about the microbiome and their functional traits interacting closely with SOM dynamics in temperate soils, tropical soils under agricultural use have been still neglected to a great extent. The majority of available studies revealed mainly descriptive data on the structural composition of microbial communities rather than questioning if detected structural alterations of the soil microbiome influenced key processes in N and P cycling which actually maintain ecosystem functioning and soil productivity. This talk highlights latest efforts in deploying molecular techniques to study the compositional status of soil microbial decomposer communities and their functional attributes in response to land use change and OM management in tropical agro-ecosystems.

Distinctive effects of allochthonous and autochthonous organic matter on CDOM spectra in a tropical lake

NASA Astrophysics Data System (ADS)

Pena Mello Brandão, Luciana; Silva Brighenti, Ludmila; Staehr, Peter Anton; Asmala, Eero; Massicotte, Philippe; Tonetta, Denise; Antônio Rodrigues Barbosa, Francisco; Pujoni, Diego; Fernandes Bezerra-Neto, José

2018-05-01

Despite the increasing understanding about differences in carbon cycling between temperate and tropical freshwater systems, our knowledge on the importance of organic matter (OM) pools on light absorption properties in tropical lakes is very scarce. We performed a factorial mesocosm experiment in a tropical lake (Minas Gerais, Brazil) to evaluate the effects of increased concentrations of allochthonous and autochthonous OM, and differences in light availability on the light absorption characteristics of chromophoric dissolved organic matter (CDOM). Autochthonous OM deriving from phytoplankton ( ˜ Chl a) was stimulated by addition of nutrients, while OM from degradation of terrestrial leaves increased allochthonous OM, and neutral shading was used to manipulate light availability. Effects of the additions and shading on DOC, Chl a, nutrients, total suspended solid concentrations (TSM) and spectral CDOM absorption were monitored every 3 days. CDOM quality was characterized by spectral indices (S250-450, S275-295, S350-450, SR and SUVA254). Effects of carbon sources and shading on the spectral CDOM absorption was investigated through principal component (PCA) and redundancy (RDA) analyses. The two different OM sources affected CDOM quality very differently and shading had minor effects on OM levels, but significant effects on OM quality, especially in combination with nutrient additions. Spectral indices (S250-450 and SR) were mostly affected by allochthonous OM addition. The PCA showed that enrichment by allochthonous carbon had a strong effect on the CDOM spectra in the range between 300 and 400 nm, while the increase in autochthonous carbon increased absorption at wavelengths below 350 nm. Our study shows that small inputs of allochthonous OM can have large effects on the spectral light absorption compared to large production of autochthonous OM, with important implications for carbon cycling in tropical lakes.

Molybdenum isotope fractionation during complexation with organic matter in the Critical Zone

NASA Astrophysics Data System (ADS)

King, E. K.; Pett-Ridge, J. C.; Perakis, S. S.

2016-12-01

Molybdenum (Mo) is a micronutrient and a redox sensitive trace metal that also forms strong complexes with organic matter (OM). The fractionation of Mo in sediments associated with adsorption onto both iron (Fe) and manganese (Mn) (oxyhydr)oxides under oxic conditions and sulfide phases under euxinic conditions has been used to constrain redox conditions in the ocean. Additionally, Mo isotope dynamics in terrestrial systems can shed light on the pedogenic mechanisms driving the riverine Mo isotopic composition and how atmospheric inputs alter the trace metal budget and isotopic composition of soils. As a result of these studies, it has been hypothesized that multiple mechanisms are responsible for fractionating Mo isotopes. In particular, Mo fractionation during adsorption onto OM is unknown, despite the fact this mechanism is 3x to more than 20x greater than adsorption onto Fe- and Mn- (oxyhydr)oxides across a range of soil types from Oregon, Iceland, and Hawaii1-3 (Marks et al., 2015; Siebert et al., 2015; King et al., 2016). In this study, we measured Mo adsorption and isotopic fractionation onto insolubilized humic acid (IHA), a proxy for OM, as a function of both adsorption time (2-170 h) and pH (2-7). Preliminary results suggest that for the time series experiment, Mo adsorption onto IHA increased from 35% to 64% and a plateau was reached after 24 hours. The average Mo isotope fractionation between the solution and the IHA was Δ98Mosolution-IHA = 1.8 ± 0.3‰. For the pH series experiment, the average Mo isotope fractionation was Δ98Mosolution-IHA = 2.0 ± 0.2‰. Next, we compared the Mo isotopic composition of foliage, O-horizon, and surface soil from 12 sites in the Oregon Coast Range to better understand the impact of OM on Mo isotope dynamics in natural samples. The potential isotopic offset between dissolved and adsorbed Mo onto OM is of the same order of magnitude and direction as fractionation onto Fe- and Mn- (oxyhydr)oxides such as ferrihydrite, hematite, and birnessite which have Δ98Mosolution-oxide values of 1.1‰, 2.2‰, and 1.8‰, respectively (Goldberg et al., 2009; Wasylenki et al., 2011). These results have important implications for the interpretation of the sedimentary Mo record, its use as a paleoredox tracer, and its potential to record changes in the terrestrial weathering environment.

Landform Position and Combustion Temperature as Controls of Decomposition of Pyrogenic Organic Matter

NASA Astrophysics Data System (ADS)

Abney, R.; Berhe, A. A.

2016-12-01

Pyrogenic organic matter (PyOM) is the material left behind after incomplete combustion, which includes a spectrum of materials ranging from ash to charred biomass. Early research on PyOM assumed that it served as an inert carbon (C) pool within the soil. However, recent research has demonstrated that the decomposition of PyOM occurs on much shorter time scales. Even so, PyOM can serve as a C sink within the soil, and it can alter many soil properties. This study investigates the roles of both combustion temperature and landform position on decomposition of PyOM. Bark from Pinus jeffreyi was charred at three temperatures (200ºC, 350ºC, and 500ºC) to create PyOM, and this PyOM was incorporated into soil from two landform positions (eroding hillslope and deposition). Many recent studies on the decomposition of PyOM have utilized wood or agricultural byproducts as source material for PyOM, however bark experiences much of the effects of combustion, and it has received little to no research attention. Decomposition was measured via CO2 production from the soil and bark PyOM mixtures over an incubation period of six months. Microbial biomass was also measured throughout the incubation. The soil and PyOM mixtures were analyzed for elemental C and nitrogen, along with their stable isotopes, immediately after each gas measurement. We expect that the bark charred at higher temperatures will decompose slower than the bark charred at lower temperatures. We also expect that the bark incorporated into the depositional soil will decompose faster than the bark incorporated into the eroding soil. Several studies have already illustrated that landform position plays a critical role in controlling C storage and organic matter breakdown, however this has yet to be investigated with PyOM. Understanding the controls on PyOM breakdown is critical for better managing soils and the global C cycle.

Impacts of leaves, roots, and earthworms on soil organic matter composition and distribution in sycamore maple stands

NASA Astrophysics Data System (ADS)

Rivera, N.; Mueller, K. E.; Mueller, C. W.; Oleksyn, J.; Hale, C.; Freeman, K. H.; Eissenstat, D.

2009-12-01

The relative contributions of leaf and root material to soil organic matter (SOM) are poorly understood despite the importance of constraining SOM sources to conceptual and numeric models of SOM dynamics. Selective ingestion and bioturbation of litter and soil by earthworms can alter the fate and spatial distribution of OM in soils, including stabilization pathways of leaf and root litter. However, studies on the contributions of leaves, roots, and earthworms to SOM dynamics are rare. In 3 stands of sycamore maple (Acer pseudoplatanus) with minimal O horizon development and high earthworm activity, we sampled surface litter (> 2 mm) from the Oi horizon, fine roots (< 2 mm), bulk mineral soils (0-20 cm depth), and earthworm casts from Lumbricus terrestris middens. The chemical composition of these samples was estimated by wet-chemical degradation followed by GC-MS analysis. In addition, elemental analyses (C and N) were performed on bulk soils and earthworm casts, before and after physical fractionation by means of particle size and density. Relative to bulk soils, earthworm casts were highly enriched in organic matter, dominated by large particulate OM, and had lower acid to aldehyde ratios among lignin monomers (a proxy for extent of decomposition), confirming that L. terrestris casts stabilize recent plant litter inputs. Maple fine roots and surface litter were distinguished by different profiles of carboxylic acids estimated by GC-MS, facilitating interpretation of OM sources in bulk soil and earthworm casts. Earthworm casts were characterized by a distribution of carboxylic acids similar to that of surface litter while bulk soils had a carboxylic acid profile much closer to that of roots. These results confirm that L. terrestris is primarily a surface, leaf feeder and suggest that OM in the bulk soil may be dominated by root inputs. In bulk soils, the ratio of lignin to hydroxy- and diacids derived from suberin and cutin was low relative to plant litter, confirming the often-observed selective preservation of aliphatic over aromatic biomolecules. The ratio of lignin to cutin/suberin acids in earthworm casts was also low; based on the minimal extent of decomposition in casts evident by lignin acid to aldehyde ratios, we attribute this to selective ingestion by L. terrestris of leaf litter rich in aliphatic biomolecules at the expense of woody debris and petioles rich in lignin, rather than selective preservation.

Redox Effects on Organic Matter Storage in Coastal Sediments During the Holocene: A Biomarker/Proxy Perspective

NASA Astrophysics Data System (ADS)

Bianchi, Thomas S.; Schreiner, Kathryn M.; Smith, Richard W.; Burdige, David J.; Woodard, Stella; Conley, Daniel J.

2016-06-01

Coastal margins play a significant role in the burial of organic matter (OM) on Earth. These margins vary considerably with respect to their efficiency in OM burial and to the amounts and periodicity of their OM delivery, depending in large part on whether they are passive or active margins. In the context of global warming, these coastal regions are expected to experience higher water temperatures, changes in riverine inputs of OM, and sea level rise. Low-oxygen conditions continue to expand around the globe in estuarine regions (i.e., hypoxic zones) and shelf regions (i.e., oxygen minimum zones), which will impact the amounts and sources of OM stored in these regions. In this review, we explore how these changes are impacting the storage of OM and the preservation of sedimentary biomarkers, used as proxies to reconstruct environmental change, in coastal margins.

Organic geochemistry in Pennsylvanian tidally influenced sediments from SW Indiana

USGS Publications Warehouse

Mastalerz, Maria; Kvale, E.P.; Stankiewicz, B.A.; Portle, K.

1999-01-01

Tidal rhythmites are vertically stacked small-scale sedimentary structures that record daily variations in tidal current energy and are known to overlie some low-sulfur coals in the Illinois Basin. Tidal rhythmites from the Pennsylvanian Brazil Formation in Indiana have been analyzed sedimentologically, petrographically, and geochemically in order to understand the character and distribution of organic matter (OM) preserved in an environment of daily interactions between marine and fresh waters. The concentration of organic matter (TOC) ranges from traces to 6.9% and sulfur rarely exceeds 0.1% in individual laminae. Angular vitrinite is the major organic matter type, accounting for 50-90% of total OM. The C/S ratio decreases as the verfical distance from the underlying coal increases. A decreasing C/S ratio coupled with decreases in Pr/Ph, Pr/n-C17, Ph/n-C18 ratios and a shift of carbon isotopic composition towards less negative values suggest an increase in salinity from freshwater in the mudflat tidal rhythmite facies close to the coal to brackish/marine in the sandflat tidal rhythmite facies further above from the coal. Within an interval spanning one year of deposition, TOC and S values show monthly variability. On a daily scale, TOC and S oscillations are still detectable but they are of lower magnitude than on a monthly scale. These small-scale variations are believed to reflect oscillations in water salinity related to tidal cycles.Tidal rhythmites are vertically stacked small-scale sedimentary structures that record daily variations in tidal current energy and are known to overlie some low-sulfur coals in the Illinois Basin. Tidal rhythmites from the Pennsylvanian Brazil Formation in Indiana have been analyzed sedimentologically, petrographically, and geochemically in order to understand the character and distribution of organic matter (OM) preserved in an environment of daily interactions between marine and fresh waters. The concentration of organic matter (TOC) ranges from traces to 6.9% and sulfur rarely exceeds 0.1% in individual laminae. Angular vitrinite is the major organic matter type, accounting for 50-90% of total OM. The C/S ratio decreases as the vertical distance from the underlying coal increases. A decreasing C/S ratio coupled with decreases in Pr/Ph, Pr/n-C17, Ph/n-C18 ratios and a shift of carbon isotopic composition towards less negative values suggest an increase in salinity from freshwater in the mudflat tidal rhythmite facies close to the coal to brackish/marine in the sandflat tidal rhythmite facies further above from the coal. Within an interval spanning one year of deposition, TOC and S values show monthly variability. On a daily scale, TOC and S oscillations are still detectable but they are of lower magnitude than on a monthly scale. These small-scale variations are believed to reflect oscillations in water salinity related to tidal cycles.

Dissolved effluent organic matter: Characteristics and potential implications in wastewater treatment and reuse applications.

PubMed

Michael-Kordatou, I; Michael, C; Duan, X; He, X; Dionysiou, D D; Mills, M A; Fatta-Kassinos, D

2015-06-15

Wastewater reuse is currently considered globally as the most critical element of sustainable water management. The dissolved effluent organic matter (dEfOM) present in biologically treated urban wastewater, consists of a heterogeneous mixture of refractory organic compounds with diverse structures and varying origin, including dissolved natural organic matter, soluble microbial products, endocrine disrupting compounds, pharmaceuticals and personal care products residues, disinfection by-products, metabolites/transformation products and others, which can reach the aquatic environment through discharge and reuse applications. dEfOM constitutes the major fraction of the effluent organic matter (EfOM) and due to its chemical complexity, it is necessary to utilize a battery of complementary techniques to adequately describe its structural and functional character. dEfOM has been shown to exhibit contrasting effects towards various aquatic organisms. It decreases metal uptake, thus potentially reducing their bioavailability to exposed organisms. On the other hand, dEfOM can be adsorbed on cell membranes inducing toxic effects. This review paper evaluates the performance of various advanced treatment processes (i.e., membrane filtration and separation processes, activated carbon adsorption, ion-exchange resin process, and advanced chemical oxidation processes) in removing dEfOM from wastewater effluents. In general, the literature findings reveal that dEfOM removal by advanced treatment processes depends on the type and the amount of organic compounds present in the aqueous matrix, as well as the operational parameters and the removal mechanisms taking place during the application of each treatment technology. Copyright © 2015 Elsevier Ltd. All rights reserved.

Elephant grass, sugarcane, and rice bran in diets for confined sheep.

PubMed

Cutrim, Darley Oliveira; Alves, Kaliandra Souza; Oliveira, Luis Rennan Sampaio; da Conceição dos Santos, Rozilda; da Mata, Vanessa Jaqueline Veloso; do Carmo, Danilo Moreira; Gomes, Daiany Iris; Mezzomo, Rafael; de Carvalho, Francisco Fernando Ramos

2012-12-01

We aimed to evaluate the effects of diets, based on elephant grass or sugarcane as roughage and corn meal or rice bran as energy concentrate, on performance and body composition in terms of diet intake and digestibility. A total of 30 Santa Ines crossbreds (SIC), castrated male sheep with 19.8 ± 2.0 kg initial body weight (BW) were used. Six animals were slaughtered at the onset of the experiment to estimate the initial body composition for the other animals. The remaining 24 animals were distributed in a completely randomized 2 × 2 factorial design, with four treatments (two roughages and two concentrates) and six replicates. The sheep were slaughtered when they reached 30.0 kg BW. Elephant grass diets provided higher intake and digestibility than sugarcane diets for the following contents: dry matter (DM), organic matter (OM), crude protein (CP), neutral detergent fibre, minerals, total carbohydrates (TC), and total digestible nutrients (TDN). Among the concentrates, corn meal diets were associated with higher intakes than rice bran diets for the following contents: DM, OM, CP, TC, and TDN. Animals from all of the treatments exhibited low average daily weight gain and low protein and high fat and energy body levels. Sugarcane and rice bran can be used as ingredients in diets for sheep with low weight gain potential. Regardless of roughage or concentrate types used in diets for confined SIC sheep, performance and body composition remained unaltered.

Effect of long-term fertilization strategies on bacterial community composition in a 35-year field experiment of Chinese Mollisols.

PubMed

Ma, Mingchao; Zhou, Jing; Ongena, Marc; Liu, Wenzheng; Wei, Dan; Zhao, Baisuo; Guan, Dawei; Jiang, Xin; Li, Jun

2018-02-13

Bacteria play vital roles in soil biological fertility; however, it remains poorly understood about their response to long-term fertilization in Chinese Mollisols, especially when organic manure is substituted for inorganic nitrogen (N) fertilizer. To broaden our knowledge, high-throughput pyrosequencing and quantitative PCR were used to explore the impacts of inorganic fertilizer and manure on bacterial community composition in a 35-year field experiment of Chinese Mollisols. Soils were collected from four treatments: no fertilizer (CK), inorganic phosphorus (P) and potassium (K) fertilizer (PK), inorganic P, K, and N fertilizer (NPK), and inorganic P and K fertilizer plus manure (MPK). All fertilization differently changed soil properties. Compared with CK, the PK and NPK treatments acidified soil by significantly decreasing soil pH from 6.48 to 5.53 and 6.16, respectively, while MPK application showed no significant differences of soil pH, indicating alleviation of soil acidification. Moreover, all fertilization significantly increased soil organic matter (OM) and soybean yields, with the highest observed under MPK regime. In addition, the community composition at each taxonomic level varied considerably among the fertilization strategies. Bacterial taxa, associated with plant growth promotion, OM accumulation, disease suppression, and increased soil enzyme activity, were overrepresented in the MPK regime, while they were present at low abundant levels under NPK treatment, i.e. phyla Proteobacteria and Bacteroidetes, class Alphaproteobacteria, and genera Variovorax, Chthoniobacter, Massilia, Lysobacter, Catelliglobosispora and Steroidobacter. The application of MPK shifted soil bacterial community composition towards a better status, and such shifts were primarily derived from changes in soil pH and OM.

The Effects of Permafrost Thaw on Organic Matter Quality and Availability Along a Hill Slope in Northeastern Siberia

NASA Astrophysics Data System (ADS)

Connolly, C. T.; Spawn, S.; Ludwig, S.; Schade, J. D.; Natali, S.

2014-12-01

Climate warming and permafrost thaw in northeastern Siberia are expected to change the quantity and quality of organic matter (OM) transported through watersheds, releasing previously frozen carbon (C) to biologically available pool. Hill slopes have shown to influence the distribution of OM, resulting in a downhill accumulation of available C and nutrients relative to uphill. Here we examine how future permafrost thaw will change OM quality and availability along a hill slope in a larch-dominated watershed. We collected soils from the thawed organic and mineral layers, and 1m deep permafrost cores for dissolved organic C (DOC) and total dissolved N (TDN), C composition from measures of colored dissolved organic matter (CDOM), DOC lability from biodegradable DOC (BDOC) incubations, C and nutrient availability from extracellular-enzyme assays (EEA's), and microbial respiration from aerobic soil incubations. Here we show that organic soils (O), in comparison to mineral soils (M) and permafrost (P) are the most abundant source of C (avg O DOC: 51.6mg/L), exhibiting low molecular complexity (avg O SUVA254: 4.05) and high quality. Evidence suggests permafrost OM may be an equally abundant, and more labile source of C than mineral soils (highest P DOC: 16.1 mg/L, lowest P SUVA254: 6.32; median M DOC: 18.5 mg/L, median M SUVA254: 24.0). Furthermore, we demonstrate that there may be a positive relationship in the rate of C mineralization and distance downhill, showing 15-30% greater CO2 production/gC downhill relative to uphill. Evidence also supports a similar relationship in permafrost DOC content and molecular complexity, showing more DOC of a lower complexity further downhill. This indicates DOC transport may have been occurring through the active layer and downhill during ice-rich permafrost formation, and may supply a labile source of carbon to lowland areas and adjacent stream networks upon thaw.

Source apportionment of particulate organic matter using infrared spectra at multiple IMPROVE sites

NASA Astrophysics Data System (ADS)

Kuzmiakova, A.; Dillner, A. M.; Takahama, S.

2016-12-01

As organic aerosol is a dominant contributor to air pollution and radiative forcing in many regions in the United States, characterizing its composition and apportioning the organic mass to its major sources provides insight into atmospheric processes and guidance for decreasing its abundance. National networks, such as Interagency Monitoring of Protected Visual Environment (IMPROVE), provide multi-site and multi-year particulate matter samples useful for evaluating sources over all four seasons. To this end, our study focuses on apportioning the particulate organic matter (OM) to specific anthropogenic and biological processes from year-long infrared aerosol measurements collected at six IMPROVE sites (five national park sites and one urban site) during 2011. Pooling these organic aerosol samples into one dataset, we apply factor and cluster analyses to extract four chemical factors (two dominated by processed emissions, one dominated by hydroxyl groups, and one by hydrocarbons) and ascribe each factor to a specific source depending on the site and season. We also present a method to characterize measurement uncertainty in infrared instrumental analysis and investigate sensitivity analysis in generated factors. In Phoenix (the urban site) we find the majority (80-95%) of the OM consisted of anthropogenic activities, such as traffic emissions, fossil fuel combustion (both all year long), and residential wood burning (fall to winter). Mineral dust emissions accounted for the rest of OM (5-20%). At the National Park sites the OM concentration was lower on average and consisted of marine and dust aerosols, summertime biomass burning and biogenic aerosols, processed fossil fuel combustion, and emissions from ships and oil refineries. Our study highlights the potential for further site-specific or multi-year aerosol characterization in the context of a long-term atmospheric sampling program to quantify sources of organic particles impacting air quality, aid in policy-making, and assess which (trans)formation mechanisms proposed in laboratory studies are consistent with observations.

The Interacting controls of pyrolysis temperature and plant taxa on pyrogenic organic matter stability and decomposition in a Northern Michigan forest soil

NASA Astrophysics Data System (ADS)

Gibson, C. D.; Filley, T. R.; Bird, J. A.; Hatton, P. J.; Stark, R. E.; Nadelhoffer, K. J.

2017-12-01

Pyrogenic organic matter (PyOM) produced during forest fires is considered a large sink of stable soil organic matter (SOM) in boreal-temperate forest ecotones, where fire frequency and intensity is growing with changing climate. Understanding how changes in fire regime and predicted shifts in plant taxa will interact to affect PyOM dynamics in soil is imperative to assessing the impact of climate change on SOM maintenance. The stability of PyOM in soil may be co-determined by the physiochemical structure imparted on PyOM during pyrolysis and by its initial taxa-dependent wood chemistry and anatomy. To determine PyOM-C turnover rates in soil, we followed the fate of 13C-enriched wood or PyOM (200, 300, 450, or 600°C) derived from red maple (RM) or jack pine (JP) wood in soil from a recently burned forest in northern Michigan, USA. We found that pyrolysis temperature-controlled physiochemical changes influenced, with threshold dynamics, PyOM stability resulting in mean residence times of 2 (PyOM 200°C) to 450 years for both taxa, confirming that most PyOM (<600°C) turns over on the century, not millennial time scale. Water leachable C, carbohydrate and non-lignin phenol content correlated positively with early PyOM-C mineralization for both JP and RM, but the pyrolysis temperature at which this interaction was strongest differed with taxa reflecting the difference in thermal transition in which carbonization begins (300°C for JP and 450°C for RM). In contrast to previous studies, the addition of sucrose suggests that a co-metabolism mechanism of PyOM decomposition is minor in this soil. Our results show that while the first order control on PyOM stability in this soil is pyrolysis temperature, wood taxa did affect PyOM C MRT, in part due to differences in the amount of water soluble C released by PyOM during the initial decomposition dynamics in soil.

Stable isotope ratios of nonexchangeable hydrogen in organic matter of soils and plants along a 2100-km climosequence in Argentina: New insights into soil organic matter sources and transformations?

NASA Astrophysics Data System (ADS)

Ruppenthal, Marc; Oelmann, Yvonne; del Valle, Héctor Francisco; Wilcke, Wolfgang

2015-03-01

The quantitative contribution of shoot and root organic matter (OM) to the soil carbon (C) stock is still unknown, mainly because of methodological restrictions. The novel measurement of the nonexchangeable hydrogen (H) stable isotope ratio (δ2Hn) in bulk OM provides new opportunities to investigate the sources of soil C and its climate-dependent transformations. Our objectives were to test whether (I) there are systematic differences between δ2Hn values of aboveground and belowground plant OM and (II) δ2Hn values of litter and soil OM relate to climate and plant OM source δ2Hn signals. We determined δ2Hn values of bulk shoot, root, litter and demineralized soil OM from 20 sampling sites along a 2100-km climosequence from the Argentinean Pampas to the Patagonian steppe. The δ2Hn values of shoot and litter OM correlated closely with the aridity index (r = -0.83, p < 0.001 and r = -0.78, p < 0.001, respectively) because of H isotope fractionation during aridity-controlled transpiration in shoots. In contrast, δ2Hn values of root and soil OM showed a close correlation with modeled mean annual δ2H values of local precipitation (r = 0.91, p < 0.001 and r = 0.97, p < 0.001, respectively, root mean square error of 8.2‰ and 7.2‰, respectively) and thus mean annual temperature (r = 0.80, p < 0.001 and r = 0.88, p < 0.001, respectively). δ2Hn values of shoot and root OM differed markedly (no linear correlation) most likely because of biosynthetic exchange of C-bound H with ambient water in the roots. δ2Hn values of root and demineralized soil OM, however, were closely correlated (r = 0.91, p < 0.001) with a constant offset irrespective of climatic conditions, suggesting that root OM was a more important source of soil OM than shoot OM. A possible contribution of shoot OM to soil OM could only be explained if shoot OM underwent biosynthetic exchange of C-bound H with ambient water in soil during microbial and fungal decomposition. This mechanism is known for substrates processed through the microbial and fungal glycolysis-gluconeogenesis metabolic pathways. Our modeling suggested that the δ2Hn signature of soil OM is best explained under the assumption that root OM is the predominant source of soil OM, rather than shoot and litter OM.

Numerical simulation of organic waste aerobic biodegradation: a new way to correlate respiration kinetics and organic matter fractionation.

PubMed

Denes, Jeremy; Tremier, Anne; Menasseri-Aubry, Safya; Walter, Christian; Gratteau, Laurette; Barrington, Suzelle

2015-02-01

Composting wastes permits the reuse of organic matter (OM) as agricultural amendments. The fate of OM during composting and the subsequent degradation of composts in soils largely depend on waste OM quality. The proposed study aimed at developing a model to predict the evolution in organic matter quality during the aerobic degradation of organic waste, based on the quantification of the various OM fractions contained in the wastes. The model was calibrated from data gathered during the monitoring of four organic wastes (two non-treated wastes and their digestates) exposed to respirometric tests. The model was successfully fitted for all four wastes and permitted to predict respiration kinetics, expressed as CO2 production rates, and the evolution of OM fractions. The calibrated model demonstrated that hydrolysis rates of OM fractions were similar for all four wastes whereas the parameters related to microbial activity (eg. growth and death rates) were specific to each substrate. These later parameters have been estimated by calibration on respirometric data, thus demonstrating that coupling analyses of OM fractions in initial wastes and respirometric tests permit the simulation of the biodegradation of various type of waste. The biodegradation model presented in this paper could thereafter be integrated in a composting model by implementing mass and heat balance equations. Copyright © 2014 Elsevier Ltd. All rights reserved.

Biochemical Characteristics of Organic Matter in a Guano Concretion of Late Miocene or Pliocene Age from Manchester Parish in Jamaica

PubMed Central

Spence, Adrian; Hanson, Richard E.; Johnson, Toni; Robinson, Claion; Annells, Richard N.

2013-01-01

The biogeochemical fate of organic matter (OM) entering soils is an important issue that must be examined to better understand its roles in nitrogen cycling and as a natural modulator of soil-atmospheric carbon fluxes. Despite these critical roles, there are uncertainties in estimating the contribution of this feedback mechanism due in part to a lack of molecular-level information regarding the origin and labile and refractory inventories of OM in soils. In this study, we used a multi-analytical approach to determine molecular-level information for the occurrence and stabilization of OM in a bird guano concretion of the Late Miocene or Pliocene age in Jamaica. We determined the specific organic structures persisting in the concretion and the possible contribution of fossil organic matter to the OM pool in modern environments. Our results indicate that aliphatic species, presumably of a highly polymethylenic nature [(CH2)n], may significantly contribute to the stable soil-C pool. Although not as significant, proteins and carbohydrates were also enriched in the sample, further suggesting that fossil organic matter may contribute to carbon and nitrogen pools in present day soil organic matter. PMID:23843688

Biochemical characteristics of organic matter in a guano concretion of late miocene or pliocene age from manchester parish in Jamaica.

PubMed

Spence, Adrian; Hanson, Richard E; Johnson, Toni; Robinson, Claion; Annells, Richard N

2013-01-01

The biogeochemical fate of organic matter (OM) entering soils is an important issue that must be examined to better understand its roles in nitrogen cycling and as a natural modulator of soil-atmospheric carbon fluxes. Despite these critical roles, there are uncertainties in estimating the contribution of this feedback mechanism due in part to a lack of molecular-level information regarding the origin and labile and refractory inventories of OM in soils. In this study, we used a multi-analytical approach to determine molecular-level information for the occurrence and stabilization of OM in a bird guano concretion of the Late Miocene or Pliocene age in Jamaica. We determined the specific organic structures persisting in the concretion and the possible contribution of fossil organic matter to the OM pool in modern environments. Our results indicate that aliphatic species, presumably of a highly polymethylenic nature [(CH2)n], may significantly contribute to the stable soil-C pool. Although not as significant, proteins and carbohydrates were also enriched in the sample, further suggesting that fossil organic matter may contribute to carbon and nitrogen pools in present day soil organic matter.

Evolution of molecular weight and fluorescence of effluent organic matter (EfOM) during oxidation processes revealed by advanced spectrographic and chromatographic tools.

PubMed

Chen, Zhiqiang; Li, Mo; Wen, Qinxue; Ren, Nanqi

2017-11-01

Effluent organic matter (EfOM) is an emerging concern to receiving aquatic environment due to its refractory property. The degradation of EfOM in ozonation and other two advanced oxidation processes (AOPs), UV/H 2 O 2 and UV/persulfate (PS), was investigated in this study. Fluorescence spectra coupled with parallel factor analysis (PARAFAC) and two-dimensional correlation gel permeation chromatography (2D-GPC) were used to track the evolution of EfOM during each oxidation process. Results showed that the degradation of EfOM indicated by dissolved organic carbon (DOC), UV 254 and fluorescence components, fitted well with pseudo-first-order kinetic model during the oxidation processes. Ozonation showed higher degradation efficiency than AOPs, while UV/PS was more effective than UV/H 2 O 2 with equimolar oxidants dosage. Ozone and SO· 4 - were more reactive with terrestrial humic-like substances, while hydroxyl radical preferentially reacted with protein-like substances. Organic molecules with higher molecular weight (MW) were susceptible to ozone or radicals. Ozonation could transform higher MW (MW of 3510 and 575) organic matters into lower MW organic matters (MW of 294), while reductions of all the organics were observed in both AOPs. Due to the higher reaction rates between ozone and EfOM, ozonation maybe serve as a pre-treatment for AOPs to reduce the radical and energy consumption and improve mineralization of EfOM by AOPs. The decline in DOC, UV 254 , fluorescence and reduction in oxidants increased with the increase of oxidants dosage, and linear correlations among them were found during the ozonation and AOPs. Copyright © 2017. Published by Elsevier Ltd.

Distinguishing Terrestrial Organic Carbon in Marginal Sediments of East China Sea and Northern South China Sea

NASA Astrophysics Data System (ADS)

Kandasamy, Selvaraj; Lin, Baozhi; Wang, Huawei; Liu, Qianqian; Liu, Zhifei; Lou, Jiann-Yuh; Chen, Chen-Tung Arthur; Mayer, Lawrence M.

2016-04-01

Knowledge about the sources, transport pathways and behavior of terrestrial organic carbon in continental margins adjoining to large rivers has improved in recent decades, but uncertainties and complications still exist with human-influenced coastal regions in densely populated wet tropics and subtropics. In these regions, the monsoon and other episodic weather events exert strong climatic control on mineral and particulate organic matter delivery to the marginal seas. Here we investigate elemental (TOC, TN and bromine-Br) and stable carbon isotopic (δ13C) compositions of organic matter (OM) in surface sediments and short cores collected from active (SW Taiwan) and passive margin (East China Sea) settings to understand the sources of OM that buried in these settings. We used sedimentary bromine to total organic carbon (Br/TOC) ratios to apportion terrigenous from marine organic matter, and find that Br/TOC may serve as an additional, reliable proxy for sedimentary provenance in both settings. Variations in Br/TOC are consistent with other provenance indicators in responding to short-lived terrigenous inputs. Because diagenetic alteration of Br is insignificant on shorter time scales, applying Br/TOC ratios as a proxy to identify organic matter source along with carbon isotope mixing models may provide additional constraints on the quantity and transformation of terrigenous organics in continental margins. We apply this combination of approaches to land-derived organic matter in different depositional environments of East Asian marginal seas.

Anthropogenic organic matter in the Great Marsh of the Indiana Dunes National Lakeshore and its implications

USGS Publications Warehouse

Mastalerz, Maria; Souch, C.; Filippelli, G.M.; Dollar, N.L.; Perkins, S.M.

2001-01-01

Cores from the Great Marsh area of the Indiana Dunes National Lakeshore were examined in order to document variations in concentration, type and size of anthropogenic organic matter (AnOM-coal, coke, etc.) and discuss their relationship to the concentration of such trace elements as Pb, Zn, and Mn in the near-surface sediment section. The results indicate that the first appearance of AnOM corresponds to the onset of industrialization in the area. There is also a general relationship between the occurrence of AnOM and Zn, Pb, and Mn. Trace metals were likely transported from the industrial sites to the area of their deposition as sulfur-bearing coatings on small anthropogenic particles. After deposition, these sulfur-bearing compounds reacted with organic matter within the marsh. As a result of bacterial reduction, the pyrite was produced, as suggested by a close relationship between the pyrite and AnOM. Distance from the industrial complex upwind as well as local hydrologic conditions are among the major factors controlling distribution of AnOM and trace elements. At the same distance from the source, types and sizes of AnOM are influenced by the duration and frequency of flooding. ?? 2001 Elsevier Science B.V. All rights reserved.

Comparative organic geochemistry of Indian margin (Arabian Sea) sediments: estuary to continental slope

NASA Astrophysics Data System (ADS)

Cowie, G.; Mowbray, S.; Kurian, S.; Sarkar, A.; White, C.; Anderson, A.; Vergnaud, B.; Johnstone, G.; Brear, S.; Woulds, C.; Naqvi, S. W.; Kitazato, H.

2014-02-01

Surface sediments from sites across the Indian margin of the Arabian Sea were analysed for their carbon and nitrogen compositions (elemental and stable isotopic), grain size distributions and biochemical indices of organic matter (OM) source and/or degradation state. Site locations ranged from the estuaries of the Mandovi and Zuari rivers to depths of ~ 2000 m on the continental slope, thus spanning nearshore muds and sands on the shelf and both the semi-permanent oxygen minimum zone (OMZ) on the upper slope (~ 200-1300 m) and the seasonal hypoxic zone that impinges on the shelf. Source indices showed mixed marine and terrigenous OM within the estuaries, and overwhelming predominance (80%+) of marine OM on the shelf and slope. Thus, riverine OM is heavily diluted by autochthonous marine OM and/or is efficiently remineralised within or immediately offshore of the estuaries. Any terrigenous OM that is exported appears to be retained in nearshore muds; lignin phenols indicate that the small terrigenous OM content of slope sediments is of different origin, potentially from rivers to the north. Organic C contents of surface shelf and slope sediments varied from < 0.5 wt % in relict shelf sands to over 7 wt % at slope sites within the OMZ, decreasing to ≤ 1 wt % at 2000 m. Major variability (~ 5 wt %) was found at slope sites within the OMZ of similar depth and near-identical bottom-water oxygen concentration. A strong relationship between organic C and sediment grain size was seen for sediments within the OMZ, but lower C loadings were found for sites on the shelf and below the OMZ. Diagenetic indices confirmed that lower C content below the OMZ is associated with greater extent of OM degradation, but that C-poor shelf sediments are not consistently more degraded than those within the OMZ. Together, the results indicate that OM enrichment on the upper slope can be explained by physical controls (winnowing and/or dilution) on the shelf and progressive OM degradation with increasing oxygen exposure below the OMZ. Reduced oxygen exposure may contribute to OM enrichment at some sites within the OMZ, but hydrodynamic processes are the overriding control on sediment OM distribution.

A rapid method for concentrating sedimentary organic matter for vitrinite reflectance analysis.

USGS Publications Warehouse

Barker, C.E.

1982-01-01

The tecnique discussed in this paper utilizes crushing, high-speed blending, and ultrasonic treatment to mechanically disaggregate rock and release the sedimentary organic matter (OM) in a suitable heavy liquid. This new method can provide freeze-dried concentrated OM in approximately 8 to 24 hours (longer time is necessary for removing carbonate). Under optimal conditions, it is possible to concentrate the OM and prepare a hardened epoxy microscope slide in about 24 hours. Subsequent grinding, polishing, and drying allows microscopic examination of the organic concentrate the next day.-from Author

Mussels can both outweigh and interact with the effects of terrestrial to freshwater resource subsidies on littoral benthic communities.

PubMed

Smith, Bethany R; Aldridge, David C; Tanentzap, Andrew J

2018-05-01

Litterfall is an important resource subsidy for lake ecosystems that primarily accumulates in littoral zones. Bivalves are abundant within littoral zones and may modify the effects of terrestrial resource subsidies through trophic interactions and engineering their surrounding habitat. Leaf inputs to lakes and freshwater mussel abundances are changing throughout the boreal ecoregion so we set out to investigate how the co-occurring benthic community might respond. We set up an in situ mesocosm experiment in Ramsey Lake, Sudbury, ON, Canada. Mesocosms contained sediments of either 5% or 35% terrestrial organic matter (tOM), into which we placed mussels (Elliptio complanata) at differing densities (0, 0.4 and 2musselsm -2 , with a sham mussel treatment at 0.4musselsm -2 ). Over one month we recorded the sediment chemistry (dissolved organic carbon, nitrogen and phosphorus), littoral organisms (benthic algae and zooplankton) and mussel growth. At high mussel densities we recorded a 90%, 80%, 45% and 40% reduction in phosphorus, dissolved organic carbon, nitrogen and benthic diatoms, respectively, whereas at low mussel densities we observed a 3-fold increase in zooplankton. We discuss that these results were caused by a combination of bioturbation and trophic interactions. Benthic diatom concentrations were also reduced by 20% in sediments of 35% tOM, likely due to shading and competition with bacteria. Mussel growth increased at high mussel densities but was offset at high tOM, likely due to the organic matter interfering with filter feeding. Our results suggest that mussels can alter the geochemical composition of sediments and abundances of associated littoral organisms, in some cases regardless of tOM quantity. Therefore, the dominant top-down control exerted by freshwater mussels may outweigh bottom-up effects of tOM additions. Generally, our study reveals the importance of considering dominant species when studying the effects of cross-ecosystem resource fluxes. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

Changes in the composition of organic matter from prodeltaic sediments after a large flood event (Po River, Italy)

NASA Astrophysics Data System (ADS)

Tesi, T.; Langone, L.; Goñi, M. A.; Miserocchi, S.; Bertasi, F.

2008-04-01

The Po River (Italy) experienced a 100-year flood in October 2000. Surface sediments (0-1 cm) from cross-shelf transects were collected in the Po prodelta area (Adriatic Sea) in December 2000, in order to describe the distribution of organic matter (OM) along the main sediment dispersal system immediately after the flood event. Stations were subsequently reoccupied in October 2001 and April 2002. This sampling program provided a special opportunity to characterize the initial surficial flood deposit and the evolution of its associated OM over the course of 2 years. CuO oxidation, elemental, δ 13C, Δ 14C, and grain-size analyses were carried out to characterize the source, age, and spatial variability of sedimentary OM. Statistical analysis (PERMANOVA) was then applied to investigate temporal changes in different portions of the Po prodelta area. Isotopic and biomarker data suggest that the sedimentary OM in the flood deposit was initially dominated by aged (Δ 14C Dec-00 = -298.7 ± 56.3‰), lignin-poor OM (Λ Dec-00 = 1.96 ± 0.33 mg/100 mg OC), adsorbed on the fine material (clay Dec-00 = 72.1 ± 4.8%) delivered by the flood. In the 2 years following the flood, post-depositional processes significantly increased the content of lignin (Λ Oct-01 = 2.19 ± 0.51 mg/100 mg OC; Λ Apr-02 = 2.61 ± 0.63 mg/100 mg OC); and coarse material (silt and sand), while decreasing the contributions from aged OC (Δ 14C Oct-01 = -255.7 ± 32.8‰; Δ 14C Apr-02 = -213.2 ± 30.4‰) and fine fraction (clay Oct-01 = 54.8 ± 9.5%; clay Apr-02 = 44.6 ± 13.3%). The major changes were observed in the northern and central portions of the prodelta.

Discrimination in Degradability of Soil Pyrogenic Organic Matter Follows a Return-On-Energy-Investment Principle.

PubMed

Harvey, Omar R; Myers-Pigg, Allison N; Kuo, Li-Jung; Singh, Bhupinder Pal; Kuehn, Kevin A; Louchouarn, Patrick

2016-08-16

A fundamental understanding of biodegradability is central to elucidating the role(s) of pyrogenic organic matter (PyOM) in biogeochemical cycles. Since microbial community and ecosystem dynamics are driven by net energy flows, then a quantitative assessment of energy value versus energy requirement for oxidation of PyOM should yield important insights into their biodegradability. We used bomb calorimetry, stepwise isothermal thermogravimetric analysis (isoTGA), and 5-year in situ bidegradation data to develop energy-biodegradability relationships for a suite of plant- and manure-derived PyOM (n = 10). The net energy value (ΔE) for PyOM was between 4.0 and 175 kJ mol(-1); with manure-derived PyOM having the highest ΔE. Thermal-oxidation activation energy (Ea) requirements ranged from 51 to 125 kJ mol(-1), with wood-derived PyOM having the highest Ea requirements. We propose a return-on-investment (ROI) parameter (ΔE/Ea) for differentiating short-to-medium term biodegradability of PyOM and deciphering if biodegradation will most likely proceed via cometabolism (ROI < 1) or direct metabolism (ROI ≥ 1). The ROI-biodegradability relationship was sigmoidal with higher biodegradability associated with PyOM of higher ROI; indicating that microbes exhibit a higher preference for "high investment value" PyOM.

Protozoa enhance foraging efficiency of arbuscular mycorrhizal fungi for mineral nitrogen from organic matter in soil to the benefit of host plants.

PubMed

Koller, Robert; Rodriguez, Alia; Robin, Christophe; Scheu, Stefan; Bonkowski, Michael

2013-07-01

Dead organic matter (OM) is a major source of nitrogen (N) for plants. The majority of plants support N uptake by symbiosis with arbuscular mycorrhizal (AM) fungi. Mineralization of N is regulated by microfauna, in particular, protozoa grazing on bacteria. We hypothesized that AM fungi and protozoa interactively facilitate plant N nutrition from OM. In soil systems consisting of an OM patch and a root compartment, plant N uptake and consequences for plant carbon (C) allocation were investigated using stable isotopes. Protozoa mobilized N by consuming bacteria, and the mobilized N was translocated via AM fungi to the host plant. The presence of protozoa in both the OM and root compartment stimulated photosynthesis and the translocation of C from the host plant via AM fungi into the OM patch. This stimulated microbial activity in the OM patch, plant N uptake from OM and doubled plant growth. The results indicate that protozoa increase plant growth by both mobilization of N from OM and by protozoa-root interactions, resulting in increased C allocation to roots and into the rhizosphere, thereby increasing plant nutrient exploitation. Hence, mycorrhizal plants need to interact with protozoa to fully exploit N resources from OM. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

Cascading influence of inorganic nitrogen sources on DOM production, composition, lability and microbial community structure in the open ocean.

PubMed

Goldberg, S J; Nelson, C E; Viviani, D A; Shulse, C N; Church, M J

2017-09-01

Nitrogen frequently limits oceanic photosynthesis and the availability of inorganic nitrogen sources in the surface oceans is shifting with global change. We evaluated the potential for abrupt increases in inorganic N sources to induce cascading effects on dissolved organic matter (DOM) and microbial communities in the surface ocean. We collected water from 5 m depth in the central North Pacific and amended duplicate 20 liter polycarbonate carboys with nitrate or ammonium, tracking planktonic carbon fixation, DOM production, DOM composition and microbial community structure responses over 1 week relative to controls. Both nitrogen sources stimulated bulk phytoplankton, bacterial and DOM production and enriched Synechococcus and Flavobacteriaceae; ammonium enriched for oligotrophic Actinobacteria OM1 and Gammaproteobacteria KI89A clades while nitrate enriched Gammaproteobacteria SAR86, SAR92 and OM60 clades. DOM resulting from both N enrichments was more labile and stimulated growth of copiotrophic Gammaproteobacteria (Alteromonadaceae and Oceanospirillaceae) and Alphaproteobacteria (Rhodobacteraceae and Hyphomonadaceae) in weeklong dark incubations relative to controls. Our study illustrates how nitrogen pulses may have direct and cascading effects on DOM composition and microbial community dynamics in the open ocean. © 2017 Society for Applied Microbiology and John Wiley & Sons Ltd.

The effect of fire on soil organic matter--a review.

PubMed

González-Pérez, José A; González-Vila, Francisco J; Almendros, Gonzalo; Knicker, Heike

2004-08-01

The extent of the soil organic carbon pool doubles that present in the atmosphere and is about two to three times greater than that accumulated in living organisms in all Earth's terrestrial ecosystems. In such a scenario, one of the several ecological and environmental impacts of fires is that biomass burning is a significant source of greenhouse gases responsible for global warming. Nevertheless, the oxidation of biomass is usually incomplete and a range of pyrolysis compounds and particulate organic matter (OM) in aerosols are produced simultaneously to the thermal modification of pre-existing C forms in soil. These changes lead to the evolution of the OM to "pyromorphic humus", composed by rearranged macromolecular substances of weak colloidal properties and an enhanced resistance against chemical and biological degradation. Hence the occurrence of fires in both undisturbed and agricultural ecosystems may produce long-lasting effects on soils' OM composition and dynamics. Due to the large extent of the C pool in soils, small deviations in the different C forms may also have a significant effect in the global C balance and consequently on climate change. This paper reviews the effect of forest fires on the quantity and quality of soils' OM. It is focused mainly on the most stable pool of soil C; i.e., that having a large residence time, composed of free lipids, colloidal fractions, including humic acids (HA) and fulvic acids (FA), and other resilient forms. The main transformations exerted by fire on soil humus include the accumulation of new particulate C forms highly resistant to oxidation and biological degradation including the so-called "black carbon" (BC). Controversial environmental implications of such processes, specifically in the stabilisation of C in soil and their bearing on the global C cycle are discussed.

Fossil organic matter characteristics in permafrost deposits of the northeast Siberian Arctic

Treesearch

Lutz Schirrmeister; Guido Grosse; Sebastian Wetterich; Pier Paul Overduin; Jens Straub; Edward A.G. Schuur; Hans-Wolfgang Hubberton

2011-01-01

Permafrost deposits constitute a large organic carbon pool highly vulnerable to degradation and potential carbon release due to global warming. Permafrost sections along coastal and river bank exposures in NE Siberia were studied for organic matter (OM) characteristics and ice content. OM stored in Quaternary permafrost grew, accumulated, froze, partly decomposed, and...

Localized application of soil organic matter shifts distribution of cluster roots of white lupin in the soil profile due to localized release of phosphorus

PubMed Central

Li, Hai-Gang; Shen, Jian-Bo; Zhang, Fu-Suo; Lambers, Hans

2010-01-01

Background and Aims Phosphorus (P) is a major factor controlling cluster-root formation. Cluster-root proliferation tends to concentrate in organic matter (OM)-rich surface-soil layers, but the nature of this response of cluster-root formation to OM is not clear. Cluster-root proliferation in response to localized application of OM was characterized in Lupinus albus (white lupin) grown in stratified soil columns to test if the stimulating effect of OM on cluster-root formation was due to (a) P release from breakdown of OM; (b) a decrease in soil density; or (c) effects of micro-organisms other than releasing P from OM. Methods Lupin plants were grown in three-layer stratified soil columns where P was applied at 0 or 330 mg P kg−1 to create a P-deficient or P-sufficient background, and OM, phytate mixed with OM, or perlite was applied to the top or middle layers with or without sterilization. Key Results Non-sterile OM stimulated cluster-root proliferation and root length, and this effect became greater when phytate was supplied in the presence of OM. Both sterile OM and perlite significantly decreased cluster-root formation in the localized layers. The OM position did not change the proportion of total cluster roots to total roots in dry biomass among no-P treatments, but more cluster roots were concentrated in the OM layers with a decreased proportion in other places. Conclusions Localized application of non-sterile OM or phytate plus OM stimulated cluster-root proliferation of L. albus in the localized layers. This effect is predominantly accounted for by P release from breakdown of OM or phytate, but not due to a change in soil density associated with OM. No evidence was found for effects of micro-organisms in OM other than those responsible for P release. PMID:20150198

Organic matter content and particle size modifications in mangrove sediments as responses to sea level rise.

PubMed

Sanders, Christian J; Smoak, Joseph M; Waters, Mathew N; Sanders, Luciana M; Brandini, Nilva; Patchineelam, Sambasiva R

2012-06-01

Mangroves sediments contain large reservoirs of organic material (OM) as mangrove ecosystems produce large quantities and rapidly burial OM. Sediment accumulation rates of approximately 2.0 mm year(-1), based on (210)Pb(ex) dating, were estimated at the margin of two well-developed mangrove forest in southern Brazil. Regional data point to a relative sea level (RSL) rise of up to ∼4.0 mm year(-1). This RSL rise in turn, may directly influence the origin and quantity of organic matter (OM) deposited along mangrove sediments. Lithostratigraphic changes show that sand deposition is replacing the mud (<63 μm) fraction and OM content is decreasing in successively younger sediments. Sediment accumulation in coastal areas that are not keeping pace with sea level rise is potentially conducive to the observed shifts in particle size and OM content. Copyright © 2012 Elsevier Ltd. All rights reserved.

Climatic warming and overgrazing induced the high concentration of organic matter in Lake Hulun, a large shallow eutrophic steppe lake in northern China.

PubMed

Chen, Xiaofeng; Chuai, Xiaoming; Yang, Liuyan; Zhao, Huiying

2012-08-01

An abnormally high concentration of organic matter (OM) in Lake Hulun, a large shallow eutrophic lake located in the sparsely populated Hulun Buir Steppe, was observed in a field investigation. Little was known about the origin of the OM. To identify the source of the OM in Lake Hulun, the carbon/nitrogen (C/N) ratio, natural abundance of stable isotope and three dimensional excitation emission matrix (3DEEM) fluorescence spectroscopy techniques were employed. Furthermore, a cyanobacterial incubation and degradation experiment was conducted in the laboratory to quantify the contribution of algae to dissolved organic matter (DOM) in Lake Hulun. C/N, the stable carbon isotope (δ(13)C) values typical of C3 plant debris in particulate organic matter (POM) and the fluorescence indices of DOM indicate that most of the OM in Lake Hulun is of terrigenous origin. It was deduced that only about 10.2% and 7.3% of DOM were contributed by algae in September and January, respectively, according to the linear correlation between the concentrations of algae-derived DOM and the fluorescence intensities of tyrosine-like matter. According to the stockbreeding development and climate change in Hunlun Buir Steppe, we deduced that the destruction of the grassland ecosystem by overgrazing in specific locations and trends in climatic warming and drying were the main factors causing the increase of OM and nutrient concentrations in Lake Hulun. This result highlights the need to pay more attention to the inputs of terrigenous organic matter to the lakes in northern China. Copyright © 2012 Elsevier B.V. All rights reserved.

Impact of organic matter source and quality on living benthic foraminiferal distribution on a river-dominated continental margin: A study of the Portuguese margin

NASA Astrophysics Data System (ADS)

Dessandier, Pierre-Antoine; Bonnin, Jérôme; Kim, Jung-Hyun; Bichon, Sabrina; Deflandre, Bruno; Grémare, Antoine; Sinninghe Damsté, Jaap S.

2016-06-01

Living (rose Bengal stained) benthic foraminifera were investigated on surface sediments from 23 stations from the river-dominated northwestern Portuguese margin. Samples were collected in March 2011, following the period of the maximum rainfall over the Iberian Peninsula, between 20 and 2000 m water depth along five cross-margin transects. Four of them are located off the Douro, Mondego, Tagus, and Sado Rivers and one off the Estremadura coast. The major objectives of this study are (1) to assess the impact of organic matter of various origin and quality on the benthic foraminifera and (2) to investigate the spatial differences of faunal distribution from coastal waters to the deep sea under river influences. To do this, sedimentological and biogeochemical characteristics of the sediments were identified by measuring grain size, oxygen penetration depth, total organic carbon (TOC) content, stable carbon isotopic composition of TOC (δ13CTOC) and concentration of pigments and amino acids. Based on the principal component and cluster analyses of the environmental data, three major geographical groups are identified: (1) deep stations, (2) coastal and middle slope stations, and (3) shelf stations under river influence. At the deepest stations, species are associated with high organic matter (OM) quantity but low OM quality, where Uvigerina mediterranea, Hoeglundina elegans, and agglutinated species such as Reophax scorpiurus or Bigenerina nodosaria are dominant. All stations off the Sado River, which is the most affected area by the anthropogenic influence, are also characterized by high quantity but low quality of OM with the minimum faunal density and diversity within the study area. Middle slope stations are associated with low OM content and coarse sediments (Q50) with the predominance of N. scaphum. Shallow shelf stations close to the Douro and Tagus River mouths show a dominance of taxa (e.g., Ammonia beccarii, Bulimina aculeata, Eggerelloides scaber, Nonion scaphum, Cancris auriculus, and Quinqueloculina seminula) adapted to environments characterized by high OM quality (high fresh chlorophyll (Chl a/Phaeo)) and available amino acids (enzymatically hydrolyzable amino acid (EHAA)/total enzymatically hydrolyzable amino acid (THAA)). The Biotic and Environmental linking analysis suggests that the benthic foraminiferal distribution is mostly controlled by three environmental parameters, i.e., TOC (quantity), EHAA/THAA (quality), and δ13CTOC (source). Hence, this study clearly highlights that the quantitative and qualitative inputs of OM and its source are the most important factors controlling the living benthic foraminiferal distribution with clear influences between the different rivers. This study also suggests a good tolerance of several species for river discharges where the OM quality is high.

Investigating organic matter in Fanno Creek, Oregon, Part 3 of 3: identifying and quantifying sources of organic matter to an urban stream

USGS Publications Warehouse

Goldman, Jami H.; Rounds, Stewart A.; Keith, Mackenzie K.; Sobieszczyk, Steven

2014-01-01

The sources, transport, and characteristics of organic matter (OM) in Fanno Creek, an urban stream in northwest Oregon, were assessed and quantified using: (1) optical instruments to calculate transported loads of dissolved, particulate, and total organic carbon, (2) fluorescence spectroscopy and stable isotope ratios (δ13C, δ15N) to elucidate sources and chemical properties of OM throughout the basin, and (3) synoptic sampling to investigate seasonal and hydrologic variations in the characteristics and quantity of OM. Results from this study indicate that of the roughly 324 (±2.9%) metric tons (tonnes, t) of organic carbon exported from the basin during March 2012 to March 2013, most of the OM in Fanno Creek was dissolved (72%) and was present year-round at concentrations exceeding 3–4 milligrams of carbon per liter, whereas particulate carbon typically was mobilized and transported only by higher-flow conditions. The isotopic and fluorescence characteristics of Fanno Creek OM indicate that the carbon originates primarily from terrestrial inputs, most likely riparian vegetative biomass that enters the stream via litterfall and overland transport and then travels through the system episodically as a result of hydrologic processes. The amount of OM exported from the Fanno Creek drainage over the course of a year in this study is consistent with previous estimates of annual riparian litterfall in or near the creek. Although the creek channel is actively eroding, most bank material has too little OM for that to be a dominant source of OM to the stream. Fluorescence data revealed that the OM contains primarily humic and fulvic-like components that become less aromatic as the OM moves downstream. The most significant seasonal variation was associated with OM transported in the first storms of the autumn season (fall flush). That material was characteristically different, with a larger fraction of microbially derived OM that probably resulted from an accumulation of easy-to-mobilize and decomposing material in the streambed during previous months of summertime low-flow conditions. The first fall flush produced the highest concentrations of OM of the entire year, and the resulting load of mobilized and decomposing OM resulted in a significant oxygen demand immediately downstream in the Tualatin River.

Seasonal Changes in Estuarine Dissolved Organic Matter Due to Variations in Discharge, Flushing Times and Wind-driven Mixing Events

NASA Astrophysics Data System (ADS)

Dixon, Jennifer Louise

Estuaries are highly productive habitats that transport and transform organic matter (OM), experience large changes in ionic composition and act as a transition zone between terrestrial and marine environments (Paerl et al. 1998; Markager et al. 2011; Osburn et al. 2012). OM source and matrix effects (such as salinity and pH) influence the chemical structure of DOM in estuaries and therefore affect its bioavailability, photo-reactivity, and its overall fate in these systems (Jaffe et al. 2004; Boyd et al. 2010; Pace et al. 2012; Osburn et al. 2012; Cawley et al. 2013). Within estuaries, dissolved organic matter (DOM) is a heterogeneous mixture of aromatic and aliphatic compounds, and its composition in aquatic systems varies spatially and temporally with source (Bauer and Bianchi 2011). However, the main source of DOM in estuaries, rivers and other aquatic systems, originates from vascular plant detritus, soil humus, older fossil (i.e., petrogenic) organic carbon, black carbon, marine OM and in situ production (Hedges 2002; Houghton 2007; Bauer and Bianchi 2011). Chromophoric dissolved organic matter (CDOM), the light absorbing fraction of DOM, can be characterized using optical methods such as absorption and fluorescence spectroscopy (e.g. Coble, 1996; Stedmon and Markager, 2003). By analyzing the spatial and temporal variability of DOM and CDOM within estuaries, information pertaining to OM source and fate across the freshwater-marine continuum can be obtained. These methods offer an inexpensive, non-destructive means for obtaining sensitive measurements of a diverse group of organic compounds. By using this technology to analyze the spatial and temporal variability of CDOM within estuaries, information pertaining to OM source and fate across the freshwater-marine continuum can be obtained (Fellman et al. 2011; Osburn et al. 2012; Murphy et al. 2014). Chemical biomarkers are also routinely used to identify DOM sources in coastal waters. Examples are carbon stable isotopes (Bauer, 2002) and lignin (e.g., Benner and Opsahl, 2001; Harvey and Mannino, 2001). Marine DOM derived from phytoplankton typically has carbon stable isotope (delta13C) values that range from --20 to --22‰, while terrestrial DOM derived from C3 land plants typically have delta13C values that range from --26 to --28‰ (Bauer, 2002). Lignin is an important component of vascular plants, thus making it a unique geochemical biomarker, which can be used to trace the fate of terrestrial DOM in coastal seawater (e.g., Hernes and Benner, 2003; Walker et al. 2009; Osburn and Stedmon, 2011). Further, the ratios of the different phenolic compounds derived from the oxidation of lignin can be used to distinguish between plant sources (e.g. angiosperm vs. gymnosperm, or woody vs. non-woody tissue) and the extent of exposure to degradation (Hedges et al. 1988). The highly productive, eutrophic waters of the Neuse River Estuary (NRE), in eastern North Carolina, USA, serve as a transition zone for terrigenous DOM between the head of the Neuse River and Pamlico Sound. Previous studies have determined that the NRE is dominated by inputs from riverine discharge, yet very clear shifts in DOM quality are apparent as discharge varied (Paerl et al. 1998; Osburn et al. 2012). Furthermore, flushing times within the NRE will aid in determining whether DOM is primarily autochthonous or allochthonous and if it is processed internally or transported downstream to the Pamlico Sound (Paerl et al. 1998; Mari et al. 2007, Peierls et al. 2012). Therefore, the main sources of DOM and its composition can change throughout an estuary depending on the hydrodynamic conditions. For example, increases in flushing time may allow for the accumulation of autochthonous DOM because of (1) planktonic communities within the water column having more time to utilize nutrients within the system, resulting in phytoplankton blooms and (2) lower inputs of allochthonous OM from the NRE's watershed (Dixon et al. accepted). Therefore, the main sources of DOM and its composition can change throughout an estuary depending on the hydrodynamic conditions.

Seasonal organic matter dynamics in the Great Barrier Reef lagoon: Contribution of carbohydrates and proteins

NASA Astrophysics Data System (ADS)

Lønborg, Christian; Doyle, Jason; Furnas, Miles; Menendez, Patricia; Benthuysen, Jessica A.; Carreira, Cátia

2017-04-01

Organic matter (OM) plays a fundamental role in sustaining the high productivity of coral reef ecosystems. Carbohydrates and proteins constitute two of the major chemical classes identified in the OM pool and are used as indicators of bioavailability due to their fast turn-over. We conducted three cruises across the southern shelf of the Great Barrier Reef (GBR) during the early dry, late dry and wet seasons in 2009-2010 to 1) assess the relative bioavailability of particulate (POM) and dissolved (DOM) organic matter, 2) track the temporal and spatial variability in the carbohydrate and protein contribution to the OM pool, and 3) assess factors influencing protein and carbohydrate fractions of the OM pool. Generally, higher concentrations of particulate carbohydrates were found during the wet season, while similar concentrations of particulate protein were found during the three seasons. Both the dissolved carbohydrates and proteins had highest levels during the early dry season and lowest during the wet season, suggesting seasonal variations in the chemical composition of the DOM pool. Spatially, carbohydrates showed higher concentrations at the inshore stations, while no clear spatial pattern was found for the protein concentrations. On average carbohydrates and proteins accounted for a similar fraction (13±5 and 12±6% respectively) of POM, while carbohydrates accounted for a smaller fraction of the DOM than the proteins (6±3 and 13±10%). This suggests that the POM bioavailability was similar between seasons, while the DOM bioavailability varied seasonally with highest levels during the early dry season. This demonstrates that carbohydrates and proteins in the GBR have temporal and spatial variations. Our statistical analysis showed that 1) both carbohydrates and proteins were related with the POM and DOM C:N:P stoichiometry, demonstrating that both bulk estimates (stoichiometry) and specific compounds (CHO and Prot) provide useful measures of OM bioavailability in the GBR and 2) the carbohydrates and proteins levels were controlled by the amount of nutrients and POM, which in this system is mainly of plankton origin. Overall this study shows that the POM and DOM pools contain highly bioavailable compounds and that carbohydrate and proteins could play an important role in sustaining the productivity of the GBR.

Improved end-member characterisation of modern organic matter pools in the Ohrid Basin (Albania, Macedonia) and evaluation of new palaeoenvironmental proxies

NASA Astrophysics Data System (ADS)

Holtvoeth, J.; Rushworth, D.; Copsey, H.; Imeri, A.; Cara, M.; Vogel, H.; Wagner, T.; Wolff, G. A.

2016-02-01

We present elemental, lipid biomarker and, in the supplement, compound-specific isotope (δ13C, δ2H) data for soils and leaf litter collected in the catchment of Lake Ohrid (Albania, Macedonia), as well as macrophytes, particulate organic matter and sediments from the lake itself. Lake Ohrid provides an outstanding archive of continental environmental change of at least 1.2 million years and the purpose of our study is to ground truth organic geochemical proxies that we developed in order to study past changes in the terrestrial biome. We show that soils dominate the lipid signal of the lake sediments rather than the vegetation or aquatic biomass. There is a strong imprint of suberin monomers on the composition of total lipid extracts and chain-length distributions of n-alkanoic acids, n-alcohols, ω-hydroxy acids and α, ω-dicarboxylic acids. Our end-member survey identifies that ratios of mid-chain length suberin-derived to long-chain length cuticular-derived alkyl compounds as well as their average chain length distributions can be used as new molecular proxies of organic matter sources to the lake. We tested these for the 8.2 ka event, a pronounced and widespread Holocene climate fluctuation. In SE Europe climate became drier and cooler in response to the event, as is clearly recognisable in the carbonate and organic carbon records of Lake Ohrid sediments. Our new proxies indicate biome modification in response to hydrological changes, identifying two phases of increased soil organic matter (OM) supply, first from soils with moderately degraded OM and then from more degraded soils. Our study demonstrates that geochemical fingerprinting of terrestrial OM should focus on the main lipid sources, rather than the living biomass. Both can exhibit climate-controlled variability, but are generally not identical.

Spatially Resolved, In Situ Carbon Isotope Analysis of Archean Organic Matter

NASA Technical Reports Server (NTRS)

Williford, Kenneth H.; Ushikubo, Takayuki; Lepot, Kevin; Hallmann, Christian; Spicuzza, Michael J.; Eigenbrode, Jennifer L.; Summons, Roger E.; Valley, John W.

2011-01-01

Spatiotemporal variability in the carbon isotope composition of sedimentary organic matter (OM) preserves information about the evolution of the biosphere and of the exogenic carbon cycle as a whole. Primary compositions, and imprints of the post-depositional processes that obscure them, exist at the scale of individual sedimentary grains (mm to micron). Secondary ion mass spectrometry (SIMS) (1) enables analysis at these scales and in petrographic context, (2) permits morphological and compositional characterization of the analyte and associated minerals prior to isotopic analysis, and (3) reveals patterns of variability homogenized by bulk techniques. Here we present new methods for in situ organic carbon isotope analysis with sub-permil precision and spatial resolution to 1 micron using SIMS, as well as new data acquired from a suite of Archean rocks. Three analytical protocols were developed for the CAMECA ims1280 at WiscSIMS to analyze domains of varying size and carbon concentration. Average reproducibility (at 2SD) using a 6 micron spot size with two Faraday cup detectors was 0.4 %, and 0.8 % for analyses using 1 micron and 3 micron spot sizes with a Faraday cup (for C-12) and an electron multiplier (for C-13). Eight coals, two ambers, a shungite, and a graphite were evaluated for micron-scale isotopic heterogeneity, and LCNN anthracite (delta C-13 = -23.56 +/- 0.1 %, 2SD) was chosen as the working standard. Correlation between instrumental bias and H/C was observed and calibrated for each analytical session using organic materials with H/C between 0.1 and 1.5 (atomic), allowing a correction based upon a C-13H/C-13 measurement included in every analysis. Matrix effects of variable C/SiO2 were evaluated by measuring mm to sub-micron graphite domains in quartzite from Bogala mine, Sri Lanka. Apparent instrumental bias and C-12 count rate are correlated in this case, but this may be related to a crystal orientation effect in graphite. Analyses of amorphous Archean OM suggest that instrumental bias is consistent for 12C count rates as low as 10% relative to anthracite. Samples from the ABDP-9 (n=3; Mount McRae Shale, approximately 2.5 Ga), RHDH2a (n=2; Carrawine Dolomite and Jeerinah Fm, approximately 2.6 Ga), WRL1 (n=3; Wittenoom Fm, Marra Mamba Iron Formation, and Jeerinah Fm, approximately 2.6 Ga), and SV1 (n=1; Tumbiana Fm, approximately 2.7 Ga) drill cores, each previously analyzed for bulk organic carbon isotope composition, yielded 100 new, in situ data from Neoarchean sedimentary OM. In these samples, delta C-13 varies between -53.1 and -28.3 % and offsets between in situ and bulk compositions range from -8.3 to 18.8%. In some cases, isotopic composition and mode of occurrence (e.g. morphology and mineral associations) are statistically correlated, enabling the identification of distinct reservoirs of OM. Our results support previous evidence for gradients of oxidation with depth in Neoarchean environments driven by photosynthesis and methane metabolism. The relevance of these findings to questions of bio- and syngenicity as well as the alteration history of previously reported Archean OM will be discussed.

Weathering of pyrogenic organic matter induces fungal oxidative enzyme response in single culture inoculation experiments.

PubMed

Gibson, Christy; Berry, Timothy D; Wang, Ruzhen; Spencer, Julie A; Johnston, Cliff T; Jiang, Yong; Bird, Jeffrey A; Filley, Timothy R

2016-02-01

The addition of pyrogenic organic matter (PyOM), the aromatic carbon-rich product of the incomplete combustion of plant biomass or fossil fuels, to soil can influence the rate of microbial metabolism of native soil carbon. The interaction of soil heterotrophs with PyOM may be governed by the surficial chemical and physical properties of PyOM that evolve with environmental exposure. We present results of a 36-day laboratory incubation investigating the interaction of a common white-rot fungus, Trametes versicolor, with three forms of 13 C-enriched (2.08 atom% 13 C) PyOM derived from Pinus ponderosa (450 °C): one freshly produced, and two artificially weathered (254 nm, UV light-water treatment and water-leaching alone). Analysis (FTIR, XPS) of the UV-weathered PyOM showed increased aliphatic C-H content and oxidation of aromatic carbon relative to both the original and water-leached PyOM. The addition of both weathered forms of PyOM stimulated (positively primed) fungal respiration of the growth media, while the unaltered PyOM mildly inhibited (negatively primed) respiration. Artificial weathering resulted in higher oxidative (laccase and peroxidase) enzyme activity than unaltered PyOM, possibly the result of a diminished capacity to bind reactive substrates and extracellular enzymes after weathering. However, and contrary to expectations, simple water-leached weathering resulted in a relatively higher enzyme activity and respiration than that of UV-weathering. The 13 C content of respired CO 2 indicated negligible fungal oxidation of PyOM for all treatments, demonstrating the overall low microbial reactivity of this high temperature PyOM. The increased enzymatic and positive priming response of T. versicolor to weathered PyOM highlights the importance of weathering-induced chemistry in controlling PyOM-microbe-soil carbon interactions.

Influence of Coprecipitated Organic Matter on Fe2+(aq) -Catalyzed Transformation of Ferrihydrite: Implications for Carbon Dynamics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chen, Chunmei; Kukkadapu, Ravi K.; Sparks, Donald L.

2015-08-10

The poorly crystalline Fe(III) hydroxide ferrihydrite is an important sink for organic matter (OM), nutrients and contaminants in soils and sediments. Aqueous Fe(II) is known to catalyze the transformation of ferrihydrite to more crystalline and thus less reactive phases. While coprecipitation of OM with ferrihydrite could be a common process in many environments due to changes in pH, redox potential or ionic strength, little is known about the impacts of coprecipitated OM on Fe(II)-catalyzed ferrihydrite transformation and its consequences for C dynamics. Accordingly, we explored the extent and pathways of Fe(II)-induced transformation of OM-ferrihydrite coprecipitates and subsequent C mobility. Mössbauermore » spectroscopic results indicated that the coprecipitated OM within ferrihydrite weakened the inter-particle magnetic interactions and decreased average particle size. The coprecipitated OM resulted in diminished Fe(II)-induced ferrihydrite transformation and thus preservation of ferrihydrite. The secondary mineral profiles upon Fe(II) reaction with ferrihydrite were a function of OM content and Fe(II) concentration. At low Fe(II) levels, OM completely inhibited goethite formation and stimulated lepidocrocite formation. At high Fe(II) levels, whereas goethite was formed in the presence of OM, OM reduced the amount of goethite and magnetite formation and increased the formation of lepidocrcocite. The solid-phase C content remained unchanged after reaction, while OM desorpability by H2PO4- was enhanced following reaction of OM-ferrihydrites with aqueous Fe(II). These findings provide insights into the reactivity of natural ferrihydrite containing OM in soils and sediments and the subsequent impact on mineral evolution and C dynamics.« less

Discrimination in Degradability of Soil Pyrogenic Organic Matter Follows a Return-On-Energy-Investment Principle

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harvey, Omar R.; Myers-Pigg, Allison N.; Kuo, Li-Jung

A fundamental understanding of biodegradability is central to elucidating the role(s) of pyrogenic organic matter (PyOM) in biogeochemical cycles. Since microbial community and ecosystem dynamics are driven by net energy flows, then a quantitative assessment of energy value versus energy requirement for oxidation of PyOM should yield important insights into their biodegradability. We used bomb calorimetry, step-wise isothermal thermogravimetric analysis (isoTGA) and 5-year in-situ bidegradation data, to develop energy-biodegradability relationships for a suite of plant- and manure-derived PyOM (n = 10). The net energy value (ΔE) for PyOM was between 4.0 and 175 kJ mol-1; with manure-derived PyOM having themore » highest ΔE. Thermal-oxidation activation energy (Ea) requirements ranged from 51 to 125 kJ mol-1, with wood-derived PyOM having the highest Ea requirements. We propose a return-on-investment (ROI) parameter (ΔE/Ea) for differentiating short-to-medium term biodegradability of PyOM and deciphering if biodegradation will most likely proceed via co-metabolism (ROI < 1) or direct metabolism (ROI ≥ 1). The ROI-biodegradability relationship was sigmoidal with higher biodegradability associated with PyOM of higher ROI; indicating that microbes exhibit a higher preference for “high investment value” PyOM.« less

The role of autochthonous organic matter in radioactive cesium accumulation to riverine fine sediments.

PubMed

Fujii, Manabu; Ono, Keisuke; Yoshimura, Chihiro; Miyamoto, Manami

2018-06-15

Anthropogenically released radioactive cesium (RCs) poses serious ecological and environmental concerns given its persistency in the environment. Although accumulation of RCs in aqueous and sedimentary environments is often reported to associate with organic matter (OM), the mechanisms responsible remain unclear. Here, we investigated RCs in fine sediments along the Abukuma River, the largest river near the Fukushima Daiichi Nuclear Power Plant, 1.5-4 years after the accident. Measuring the density-separated sediment fractions with a broad range of OM content (%) indicated that the RCs concentration (Bq·kg -1 ) is positively correlated with OM content for intermediate-density fractions in which OM is primarily characterized by autochthonous origin. This relationship, however, did not hold for light-density fractions containing a high proportion of large-size allochthonous OM. Furthermore, H 2 O 2 -assisted OM digestion and amorphous material dissolution treatments resulted in only a minor reduction in sedimentary RCs. These results along with the fact that sediments with high autochthonous OM content showed high specific surface area indicated that RCs is tightly associated with finer-grained and chemically non-labile inorganic fractions concurrently resident with autochthonous OM. Overall, our findings highlight that autochthonous OM exerts a significant control on the accumulation, transport, and fate of RCs in aqueous and sedimentary environments. Copyright © 2018 Elsevier Ltd. All rights reserved.

Variations in the OM/OC ratio of urban organic aerosol next to a major roadway.

PubMed

Brown, Steven G; Lee, Taehyoung; Roberts, Paul T; Collett, Jeffrey L

2013-12-01

Understanding the organic matter/organic carbon (OM/OC) ratio in ambient particulate matter (PM) is critical to achieve mass closure in routine PM measurements, to assess the sources of and the degree of chemical processing organic aerosol particles have undergone, and to relate ambient pollutant concentrations to health effects. Of particular interest is how the OM/OC ratio varies in the urban environment, where strong spatial and temporal gradients in source emissions are common. We provide results of near-roadway high-time-resolution PM1 OM concentration and OM/OC ratio observations during January 2008 at Fyfe Elementary School in Las Vegas, NV, 18 m from the U.S. 95 freeway soundwall, measured with an Aerodyne high-resolution time-of-flight aerosol mass spectrometer (HR-AMS). The average OM/OC ratio was 1.54 (+/- 0.20 standard deviation), typical of environments with a low amount of secondary aerosol formation. The 2-min average OM/OC ratios varied between 1.17 and 2.67, and daily average OM/OC ratios varied between 1.44 and 1.73. The ratios were highest during periods of low OM concentrations and generally low during periods of high OM concentrations. OM/OC ratios were low (1.52 +/- 0.14, on average) during the morning rush hour (average OM = 2.4 microg/m3), when vehicular emissions dominate this near-road measurement site. The ratios were slightly lower (1.46 +/- 0.10) in the evening (average OM = 6.3 microg/m3), when a combination of vehicular and fresh residential biomass burning emissions was typically present during times with temperature inversions. The hourly averaged OM/OC ratio peaked at 1.66 at midday. OM concentrations were similar regardless of whether the monitoring site was downwind or upwind of the adjacent freeway throughout the day, though they were higher during stagnant conditions (wind speed < 0.5 m/sec). The OM/OC ratio generally varied more with time of day than with wind direction and speed.

The molecular characteristics of pyrogenic organic materials and their aqueous leachates

NASA Astrophysics Data System (ADS)

Wozniak, A. S.; Hatcher, P.; Mitra, S.; Bostick, K. W.; Zimmerman, A. R.

2016-12-01

Pyrogenic organic matter (Py-OM), or black carbon, is known to impact soil chemistry, pollutant transport, regional and global carbon cycling, and climate. Py-OM is incorporated into soils via atmospheric deposition (e.g., from biomass, fossil fuel combustion) or direct applications by humans (e.g., biochars applied for agricultural production). Due to its presumed refractory and immobile nature, soil Py-OM is thought to be efficiently buried, sequestering atmospheric CO2. However, tracers of dissolved Py-OM (Py-DOM) have been detected in appreciable quantities in riverine, estuarine, and oceanic waters suggesting that Py-OM is more mobile in the environment than expected. The molecular characteristics of Py-OM are likely to be a controlling factor in the quantities and impacts of Py-DOM released to aqueous systems. Yet, little is known about the detailed molecular composition of these materials, let alone how those molecular characteristics vary with combustion conditions or are altered by environmental processes. Here, we examine oak and grass Py-OM (combusted over a range of temperatures), natural Py-OM (chars aged in the environment for variable lengths of time), and their Py-DOM leachates via nuclear magnetic resonance spectroscopy (NMR) and Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS). Multi-CP 13C NMR analyses of Py-OM materials and 1H NMR analyses of corresponding Py-DOM leachates reveal that Py-OM combustion temperature, environmental exposure, and molecular characteristics are reflected in Py-DOM quantities and characteristics. The relative amounts of aromatic C in Py-OM 1) decreases with environmental exposure, the relative oxygen-content in both Py-OM and Py-DOM, and the amount of Py-DOC released per g of Py-OC but 2) is positively correlated with combustion temperature and the relative contributions of acetate and aliphatic hydrogens (CH2) in Py-DOM. Preliminary FTICR-MS analyses show Py-DOM produced from oak at 400 °C to have lost carbohydrate-like compounds found in 250 °C Py-DOM and to contain an abundance of oxygenated aromatic compounds. Oak combusted at 650 °C produces Py-DOM characterized by high H/C, low O/C compounds. The results from this work will improve our understanding of Py-OM transport within and between terrestrial and aqueous systems.

Priming of native soil organic matter by pyrogenic organic matter

NASA Astrophysics Data System (ADS)

DeCiucies, Silene; Dharmakeerthi, Saman; Whitman, Thea; Woolf, Dominic; Lehmann, Johannes

2015-04-01

Priming, in relation to pyrogenic organic matter (PyOM), describes the change in mineralization rate of non-pyrogenic ("native") soil organic matter (nSOM) due to the addition of PyOM. Priming may be 'positive', in that the addition of pyC increases the mineralization rate of native SOM, or 'negative', in that the mineralization rate of nSOM is decreased. Reasons for increased mineralization may include: (i) co-metabolism: microbial decomposition of labile C-additions increases microbial activity, and facilitates additional decomposition of npSOC by active enzymes; (ii) stimulation: substrate additions result in lifted pH, nutrient, oxygen, or water constraints resulting in increased microbial activity. Decreased mineralization may be a result of: (i) inhibition: the opposite of stimulation whereby constraints are aggravated by substrate addition. Substrate addition may also cause inhibition by interfering with enzymes or signaling compounds; (ii) preferential substrate utilization: labile fraction of PyOM additions are preferentially used up by microbes thus causing a decrease in nSOC decomposition; (iii) sorption: organic compounds are adsorbed onto PyOM surfaces, decreasing their rate of mineralization; (iv) stabilization: formation of organo-mineral associations forms stable SOC pools. We have conducted a suite of experiments to investigate these potential interactions. In a seven year long incubation study, PyOM additions increased total OM mineralization for the first 2.5 years, was equal to control after 6.2 years, and was 3% lower after 7.1 years. Cumulative nSOM mineralization was 23% less with the PyOM additions than without, and over 60% of the added PyOM was present in the labile soil fraction after the 7.1 year incubation. Two additional incubation studies, one with and without plants, showed greater nSOM mineralization in the short term and lower nSOM mineralization over the long term. Increased nSOC mineralization due to the presence of plants was counteracted by PyOM additions. However, repeated additions of crop residues over seven years did not result in lower mineralization of the residue and nSOM. We have also determined that, although there is no optimal duration for pre-incubation of soil before SOC studies, the type of carbon available is crucial in determining the effects of PyOM additions. We will continue to examine the contribution of the different mechanisms by isolating variables such as nutrient addition, soil texture, and mineral availability. We anticipate that sorption on PyOM surfaces are important in nSOM stabilization and will continue to study these effects using highly labeled substrates and nano secondary ion mass spectrometry (nano-SIMS).

Nutrient content and nutrient availability of sorghum wet distiller's grain in comparison with the parental grain for ruminants.

PubMed

Trujillo, Ana I; Bruni, María; Chilibroste, Pablo

2017-06-01

The present study aimed to compare wet sorghum distiller's grain (WSDG) with sorghum grain (SG) in terms of: (i) chemical composition; (ii) in situ rumen degradation kinetics of organic matter (OM) and neutral detergent fiber (NDF); (iii) crude protein (CP) sub-fractions; (iv) in situ disappearance at 12 and 48 h; and (v) energy values. The WSDG intestinal digestibility (ID) of undegradable crude protein (UCP) was compared to soybean meal (SBM). Compared to SG, WSDG exhibited: (i) lower (P < 0.01) dry matter and non-fiber carbohydrate content, whereas the other chemical components were higher (P < 0.01); (ii) higher (P < 0.01) degradation rates of OM and NDF and lower (P < 0.01) degradable fraction of OM and NDF; (iii) lower (P < 0.05) contents of CP sub-fractions A, B1 and B2, and higher (P < 0.05) contents of B3 and C; (iv) lower (P < 0.05) protein disappearance at 12 and 48 h and higher UCP; and (v) lower (P < 0.05) energy content. The ID of UCP for WSDG was lower (P < 0.05) compared to SBM. The WSDG as a supplement provides a good source of energy. To enable its use as a protein supplement, further studies should be performed. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

Chemical and biological characterization of organic matter during composting of municipal solid waste

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chefetz, B.; Yona Chen; Hadar, Y.

Composting of municipal solid waste (MSW) was studied in an attempt to elaborate transformations of organic matter (OM) during the process and define parameters for the degree of maturity of the product. Composting was performed in 1-m{sup 3} plastic boxes and the following parameters were measured in 13 samples during 132 d of composting: temperature, C/N ratio, ash content, humic substance contents, and fractions (humic acid, fulvic acid, and nonbumic fraction-HA, FA and NHF, respectively). Spectroscopic methods (CPMAS {sup 13}C-NMR, DRIFT) were used to study the chemical composition of the OM. A bioassay based on growth of cucumber (Cucumis satifusmore » L. cv. Dlila) plants was correlated to other parameters. The C/N ratio and ash content showed a typical high rate of change during the first 60 d and reached a plateau thereafter. The HA content increased to a maximum at 112 d, corresponding to the highest plant dry weight and highest 1650/1560 (cm{sup {minus}1}/cm{sup {minus}1}) peak ratios calculated from DRIFT spectra. {sup 13}C-NMR and DRIFT spectra of samples taken from the composting MSW during the process showed that the residual OM contained an increasing level of aromatic structures. Plant-growth bioassay, HA content, and the DRIFT spectra indicated that MSW compost described in this study, stabilized and achieved maturity after about 110 d. 31 refs., 8 figs., 2 tabs.« less

Annual burning of a tallgrass prairie inhibits C and N cycling in soil, increasing recalcitrant pyrogenic organic matter storage while reducing N availability.

PubMed

Soong, Jennifer L; Cotrufo, M Francesca

2015-06-01

Grassland ecosystems store an estimated 30% of the world's total soil C and are frequently disturbed by wildfires or fire management. Aboveground litter decomposition is one of the main processes that form soil organic matter (SOM). However, during a fire biomass is removed or partially combusted and litter inputs to the soil are substituted with inputs of pyrogenic organic matter (py-OM). Py-OM accounts for a more recalcitrant plant input to SOM than fresh litter, and the historical frequency of burning may alter C and N retention of both fresh litter and py-OM inputs to the soil. We compared the fate of these two forms of plant material by incubating (13) C- and (15) N-labeled Andropogon gerardii litter and py-OM at both an annually burned and an infrequently burned tallgrass prairie site for 11 months. We traced litter and py-OM C and N into uncomplexed and organo-mineral SOM fractions and CO2 fluxes and determined how fire history affects the fate of these two forms of aboveground biomass. Evidence from CO2 fluxes and SOM C:N ratios indicates that the litter was microbially transformed during decomposition while, besides an initial labile fraction, py-OM added to SOM largely untransformed by soil microbes. Additionally, at the N-limited annually burned site, litter N was tightly conserved. Together, these results demonstrate how, although py-OM may contribute to C and N sequestration in the soil due to its resistance to microbial degradation, a long history of annual removal of fresh litter and input of py-OM infers N limitation due to the inhibition of microbial decomposition of aboveground plant inputs to the soil. These results provide new insight into how fire may impact plant inputs to the soil, and the effects of py-OM on SOM formation and ecosystem C and N cycling. © 2014 John Wiley & Sons Ltd.

Mineral formation and organo-mineral controls on the bioavailability of carbon at the terrestrial-aquatic interface

NASA Astrophysics Data System (ADS)

Rod, K. A.; Smith, A. P.; Renslow, R.

2016-12-01

Recent evidence highlights the importance of organo-mineral interactions in regulating the source or sink capacity of soil. High surface area soils, such as allophane-rich or clay-rich soils, retain organic matter (OM) via sorption to mineral surfaces which can also contribute physical isolation in interlayer spaces. Despite the direct correlation between mineral surfaces and OM accumulation, the pedogenic processes controlling the abundance of reactive surface areas and their distribution in the mineral matrix remains unclear. As global soil temperatures rise, the dissolution of primary minerals and formation of new secondary minerals may be thermodynamically favored as part of soil weathering process. Newly formed minerals can supply surfaces for organo-metallic bonding and may, therefore, stabilize OM by surface bonding and physical exclusion. This is especially relevant in environments that intersect terrestrial and aquatic systems, such as the capillary fringe zone in riparian ecosystems. To test the mechanisms of mineral surface area protection of OM, we facilitated secondary precipitation of alumino-silicates in the presence of OM held at two different temperatures in natural Nisqually River sediments (Mt Rainier, WA). This was a three month reaction intended to simulate early pedogenesis. To tease out the influence of mineral surface area increase during pedogenesis, we incubated the sediments at two different soil moisture contents to induce biodegradation. We measured OM desorption, biodegradation, and the molecular composition of mineral-associated OM both prior to and following the temperature manipulation. To simulate the saturation of capillary fringe sediment and associated transport and reaction of OM, column experiments were conducted using the reacted sediments. More co-precipitation was observed in the 20°C solution compared to the 4°C reacted solution suggesting that warming trends alter mineral development and may remove more OM from solution. The results from the static experiments will be used to model and predict the impacts of mineral sorption and biological activity on OM persistence in the context of dynamic saturation conditions and heterogeneous material properties.

White-rot fungal response to fresh and photolytically-weathered pyrogenic organic matter

NASA Astrophysics Data System (ADS)

Gibson, C. D.; Berry, T. D.; Wang, R.; Bird, J. A.; Filley, T. R.

2013-12-01

Pyrogenic organic matter (PyOM or biochar) is the product of the incomplete combustion of biomass. A better understanding of the microbial-mediated degradation of PyOM is critical to assess its role in soil C sequestration and to serve as an agricultural amendment. Recent studies have shown that PyOM additions can prime native soil C but results have been inconsistent, with studies reporting no effect, an increase, or decrease in C mineralization. This study investigated the ability of saprotrophic white-rot fungus, Trametes versicolor, to decompose an unaltered 'fresh' PyOM and a photo-oxidized PyOM. In addition, we measured PyOM-induced priming effects on the mineralization of malt extract agar media (MEA). Enriched (13C) Pinus banksiana-derived PyOM, produced at 450oC under N2, was added fresh and after 4 weeks exposure to 254 nm light to MEA. Vials containing the various types of media were then monitored for CO2 evolution and oxidative enzyme activity. We found that MEA C respired was stimulated (positive priming) by photolyzed PyOM and was inhibited with fresh PyOM addition (negative priming) relative to controls. Vetryl alcohol addition, a laccase production stimulant, resulted in less activity in the presence of PyOM compared with a control, indicating PyOM may disrupt enzyme induction processes. Loss of PyOM-13CO2 was 0.2% (× 0.001) for fresh PyOM and 1.2% (×0.001) for photolyzed PyOM C during 10 weeks averaged across media treatments. While MEA C mineralization decreased after fresh PyOM addition, both oxidative (laccase and manganese peroxidase) and hydrolytic (β glucosidase) enzyme production increased with fresh PyOM in the absence of veratryl alcohol. However, there was a decrease in its presence. These results suggest that the physiological response of this common wood decay fungus to PyOM is complex and responsive to enzymatic triggers but that PyOM itself can act to promote or suppress overall litter or soil decay by fungi.

Selenium fractions in organic matter from Se-rich soils and weathered stone coal in selenosis areas of China.

PubMed

Qin, Hai-bo; Zhu, Jian-ming; Su, Hui

2012-02-01

A high degree of association between Selenium (Se) and organic matter has been demonstrated in natural environments, but Se fractions and speciation in organic matter is unclear. In this study, a method for quantifying organic matter associated with Se (OM-Se) was developed to investigate Se fractions in organic matter in Se-rich soils and weathered stone coal from Enshi, China, where Se poisoning of humans and livestock has been documented. Initially, Se was extracted using water and a phosphate buffer. Subsequently, OM-Se was extracted using NaOH, and then speciated into Se associated with fulvic acids (FA-Se) and humic acids (HA-Se). Both FA-Se and HA-Se were further speciated into the weakly bound and strongly bound fractions using a customized hydride generation reactor. The results show that FA-Se (1.91-479 mg kg(-1)) is the predominant form of Se in all Se-rich soils and the weathered stone coal samples, accounting for more than 62% of OM-Se (3.07-484 mg kg(-1)). Weakly bound FA-Se (1.33-450 mg kg(-1)) was prevalent in the total FA-Se, while weakly bound HA-Se (0.62-26.2 mg kg(-1)) was variable in the total HA-Se (1.15-32.5 mg kg(-1)). These data indicate that OM-Se could play a significant source and sink role in the biogeochemical cycling of Se in the supergene environment. Weakly bound FA-Se seems to act as a potential source for bioavailable Se, whereas strongly bound HA-Se is a possible OM-Se sink which is not readily transformed into bioavailable Se. Copyright © 2011 Elsevier Ltd. All rights reserved.

Chemical, physical and biological factors affecting wood decomposition in forest soils

Treesearch

Martin Jurgensen; Peter Laks; David Reed; Anne Collins; Deborah Page-Dumroese; Douglas Crawford

2004-01-01

Organic matter (OM) decomposition is an important variable in forest productivity and determining the potential of forest soils to sequester atmospheric CO2 (Grigal and Vance 2000; Kimble et al. 2003). Studies using OM from a particular location gives site-specific decomposition information, but differences in OM type and quality make it difficult to compare results...

Features of distribution and quality of organic matter in the bottom sediments of the Great Peter Bay (Sea of Japan)

NASA Astrophysics Data System (ADS)

Nesterova, Olga; Tregubova, Valentina; Semal, Victoria; Vasenev, Ivan

2017-04-01

The nature and distribution of organic carbon in marine waters depends on: 1) biological productivity and revenue of the autochthonous organic matter to the bottom; 2) sediment grain-size composition and conditions of dumping, which in turn depends of hydrothermic regime, topography, speed River mist and received major erosion products; 3) living conditions of the benthos (the quantity consumed of OM, gas regime of habitats, physiological capacity of heterotrophs). Autochthonous OM of phytoplankton plays a dominant role in the processes of formation of humus in aquatic conditions. Bottom sediments at different distance from the shoreline to depths from 0.5 up to 480 m of the Sea of Japan, which are formed in various conditions of facies, were selected as the objects of study. There is no clear relationships to the amount of organic matter in bottom sediments on the characteristics of the distribution and nature of living matter in the oceans and seas. This is because the process of sedimentation and fossilization of organic matter on the seabed and the ocean floor depends on many factors (currents, depth). Humus of studied bottom sediments in composition can be attributed mainly to the humic type. Nonhydrolyzing rest is 70-90%. This is characteristic of bottom sediments formed in facial types of small bays, internal coastal shelf bights and the underwater slope. At a fraction of the carbon of humic acids in organic matter, ranging from 4 to 80% of the amount of humic and fulvic acids. Fulvic acids content is much less. This is due to more favourable conservation situation of humic acids in precipitation with high content of organic matter, whereas fulvic acids in aquatic environments are more labile and almost not dumped. Despite the fact humic acids are not the most stable component (s), however, with increased content of humic acids, the mobility of organic matter and removing it from the bottom sediments are reduced. Internal shelf facies of the Great Peter Bay is the most diverse on the content of the various components of the bottom sediments humus. This is because modern processes of sedimentations and humus formation are active in this zone. The greatest concentration of organic matter in conjunction with the submarine and coastal slope at depths of more than 120 m. Slight variations parameters that characterize the composition of humus, are notable for all bottom sediments, as well as the marine environment, largely cancels the General conditions of humus formation around the basin of the Sea of Japan. Organic substance moving in the water colomn and transforms. Only sustainable to mineralization of organic substance reaches the bottom.

Evolution of organic matter during composting of different organic wastes assessed by CPMAS {sup 13}C NMR spectroscopy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Caricasole, P.; Provenzano, M.R., E-mail: Provenza@agr.uniba.it; Hatcher, P.G.

2011-03-15

In this paper, the evolution of organic matter (OM) during composting of different mixtures of various organic wastes was assessed by means of chemical analyses and CPMAS {sup 13}C NMR spectroscopy measured during composting. The trends of temperatures and C/N ratios supported the correct evolution of the processes. The CPMAS {sup 13}C NMR spectra of all composting substrates indicated a reduction in carbohydrates and an increase in aromatic, phenolic, carboxylic and carbonylic C which suggested a preference by microorganisms for easily degradable C molecules. The presence of hardly degradable pine needles in one of the substrates accounted for the lowestmore » increase in alkyl C and the lowest reduction in carbohydrates and carboxyl C as opposite to another substrate characterized by the presence of a highly degradable material such as spent yeast from beer production, which showed the highest increase of the alkyl C/O-alkyl C ratio. The highest increase of COOH deriving by the oxidative degradation of cellulose was shown by a substrate composed by about 50% of plant residues. The smallest increases in alkyl C/O-alkyl C ratio and in polysaccharides were associated to the degradation of proteins and lipids which are major components of sewage sludge. Results obtained were related to the different composition of fresh organic substrates and provided evidence of different OM evolution patterns as a function of the initial substrate composition.« less

Compositional and functional features of humic acid-like fractions from vermicomposting of sewage sludge and cow dung.

PubMed

Li, Xiaowei; Xing, Meiyan; Yang, Jian; Huang, Zhidong

2011-01-30

The chemical changes occurring in five different substrates of sewage sludge spiked with different proportions of cow dung after vermicomposting with Eisenia foetida for 90 days were investigated. Their humic acid-like (HAL) fractions were isolated to determine the elemental and functional composition, and structural and functional characteristics using ultraviolet/visible, Fourier transform infrared (FT-IR) and fluorescence spectroscopies and scanning electron microscopy. After vermicomposting, the total organic C and C/N ratio decreased, and the total extractable C and humic acid (HA) C increased in all substrates. In the HAL fractions, the C and H contents, C/N and C/O and aliphatic structures, proteinaceous components and carbohydrates decreased, while the O and N and acidic functional group contents and C/H ratio, aromaticity and polycondensation structures increased. Further, the results suggest that the addition of cow dung to sewage sludge could improve the quality of organic matter humification of the substrates. The structures of HAL fractions in vermicomposts resembled those typical of soil HA, especially the vermicompost of cow dung alone. Scanning electron microscopy showed the microstructure of HAL fraction in final product became close-grained and lumpy. Overall results indicate that vermicomposting was an efficient technology for promoting organic matter (OM) humification in sewage sludge and cow dung alone, as well as in mixtures of both materials, improving their quality and environmental safety as a soil OM resource for utilization as soil amendments. Copyright © 2010 Elsevier B.V. All rights reserved.

Sorting of Terrestrial and Marine Organic Matter along a Marginal Submarine Canyon: Radiocarbon and Biomarker Signatures of Surface Sediments

NASA Astrophysics Data System (ADS)

Close, H. G.; Doherty, S.; Campbell, P.; McCarthy, M. D.; Prouty, N.

2016-02-01

Submarine canyons are incised features of many continental margins that can have significant influence on the hydrodynamic distribution of sediments and organic matter (OM) eroded and deposited from the continents. Baltimore Canyon, on the U.S. mid-Atlantic margin, contains a complex set of sedimentary processes that simultaneously create unique benthic habitats and control the deposition of OM. Along the canyon axis, loci of net erosion, net deposition, and intense winnowing each host diverse faunal assemblages and varying mixtures of sedimentary OM derived both from production in the overlying water column and from mobilized sediments. Bioavailable components of this deposited OM sustain benthic communities, while recalcitrant components can contribute to long-term carbon burial in the deep sea. Here we probe in detail the terrestrial versus marine origins of OM along a transect of Baltimore Canyon, as well as its bioavailability for benthic fauna, in order to explore how canyon-specific sediment dynamics might emplace a functional sorting of OM from shelf to open ocean. Determining the provenance of sedimentary OM is a continual challenge: commonly-measured bulk geochemical properties often provide insufficient information to distinguish end-member sources. We present a novel approach to separate functional classes of OM and investigate sources and degradative pathways of OM in Baltimore Canyon. In combination with bulk geochemical characteristics, surface sediments from water depths of 200-1200 meters were sequentially extracted (solvent-extracted, acid-hydrolyzed, and demineralized) to separate pools containing different prevalence of terrigenous, marine, and recalcitrant OM. Each class was analyzed for biomarker distributions; amino acid content, 13C signatures, and degradation indicators; bulk carbon and nitrogen isotopes; and radiocarbon content in order to characterize potential end-member sources within the mixture, as well as their age profiles. These geochemical properties were contextualized with accompanying sedimentological and ecological data. Results highlight the importance of coastal proximity, canyon morphology, and local hydrodynamics in determining the bioavailability of benthic organic matter and its potential for long-term carbon burial.

Microbiological Insights of the Cycling of Chloroperoxidase-Reacted Organic Matter

NASA Astrophysics Data System (ADS)

Krzmarzick, M. J.; Boothe, M.; Lim, M. L.; Wang, X.; Brooks, M.

2016-12-01

Chloroperoxidase (CPO) enzymes from fungi are one mechanism in which organic matter is halogenated in terrestrial soils. In microcosm experiments, 17 groups of bacteria were found to substantially become enriched upon CPO-reacted organic matter amendment (CPO-OM). Though some enriched groups were organohalide-respiring bacteria, most were not related to any cultured isolates of bacteria and were either loosely linked to organohalide-degrading cultures or not at all. The large diversity of uncultured bacteria that is enriched from this substrate raises new questions regarding the pathways and mechanisms of the turnover of natural organochlorides. Upon changes in organic matter source material, salinity, temperature, and fermentable substrate, large changes in the CPO-OM enrichment culture occurred due to salinity, temperature, and fermentable substrate, though organic matter source material had a minimal effect. Thus, changes in geophysical conditions, not organic matter (pine forest vs oak forest), dominate the selection of bacteria implicated in the turnover of natural organochlorides. In related experiments, the CPO-OM enrichment culture expresses increased activity towards the dechlorination of chlorinated ethenes, indicating a direct connection between natural organochloride turnover and anthropogenic organochloride degradation and bioremediation, and could partly explain the heterogeneity of natural bioremediation potential at contaminated sites.

Negligible effects of severe organic matter removal and soil compaction on loblolly pine growth over 10 years

Treesearch

Felipe G. Sanchez; D. Andrew Scott; Kim H. Ludovici

2006-01-01

The long-term soil productivity (LTSP) study was initiated to examine the effect of soil porosity and organic matter (OM) levels on net primary productivity (NPP). The study design calls for three levels of OM removal (bole, whole tree and whole tree plus forest floor) and three levels of compaction (none, moderate and severe) being imposed on harvested sites prior to...

Effects of soil organic matter content on cadmium toxicity in Eisenia fetida: implications for the use of biomarkers and standard toxicity tests.

PubMed

Irizar, A; Rodríguez, M P; Izquierdo, A; Cancio, I; Marigómez, I; Soto, M

2015-01-01

Bioavailability is affected by soil physicochemical characteristics such as pH and organic matter (OM) content. In addition, OM constitutes the energy source of Eisenia fetida, a well established model species for soil toxicity assessment. The present work aimed at assessing the effects of changes in OM content on the toxicity of Cd in E. fetida through the measurement of neutral red uptake (NRU) and mortality, growth, and reproduction (Organisation for Economic Co-operation and Development [OECD] Nos. 207 and 222). Complementarily, metallothionein (MT) and catalase transcription levels were measured. To decrease variability inherent to natural soils, artificial soils (Organization for Economic Cooperation and Development 1984) with different OM content (6, 10, and 14%) and spiked with Cd solutions at increasing concentrations were used. Low OM in soil decreased soil ingestion and Cd bioaccumulation but also increased Cd toxicity causing lower NRU of coelomocytes, 100 % mortality, and stronger reproduction impairment, probably due to the lack of energy to maintain protection mechanisms (production of MT).Cd bioaccumulation did not reflect toxicity, and OM played a pivotal role in Cd toxicity. Thus, OM content should be taken into account when using E. fetida in in vivo exposures for soil health assessment.

The role of organic matter and clay content in sediments for bioavailability of pyrene.

PubMed

Spasojević, Jelena; Maletić, Snežana; Rončević, Srđan; Grgić, Marko; Krčmar, Dejan; Varga, Nataša; Dalmacija, Božo

2018-01-01

Evaluation of the bioavailable fractions of organic contaminants such as polycyclic aromatic hydrocarbons (PAHs) is extremely important for assessing their risk to the environment. This available fraction, which can be solubilised and/or easily extracted, is believed to be the most accessible for bioaccumulation, biosorption and/or transformation. Sediment organic matter (OM) and clay play an important role in the biodegradation and bioavailability of PAHs. The strong association of PAHs with OM and clay in sediments has a great influence not only on their distribution but also on their long-term environmental impact. This paper investigates correlations between bioavailability and the clay and OM contents in sediments. The results show that OM is a better sorbent for pyrene (chosen as a model PAH) and that increasing the OM content reduces the bioavailable fraction. A mathematical model was used to predict the kinetic desorption, and these results showed that the sediment with the lowest content of OM had an F fast value of 24%, whereas sediment with 20% OM gave a value of 9%. In the experiments with sediments with different clay contents, no clear dependence between clay and rate constants of the fast desorbing fractions was observed, which can be explained by the numerous possible interactions at the molecular level.

Cloud residues and interstitial aerosols from non-precipitating clouds over an industrial and urban area in northern China

NASA Astrophysics Data System (ADS)

Li, Weijun; Li, Peiren; Sun, Guode; Zhou, Shengzhen; Yuan, Qi; Wang, Wenxing

2011-05-01

Most studies of aerosol-cloud interactions have been conducted in remote locations; few have investigated the characterization of cloud condensation nuclei (CCN) over highly polluted urban and industrial areas. The present work, based on samples collected at Mt. Tai, a site in northern China affected by nearby urban and industrial air pollutant emissions, illuminates CCN properties in a polluted atmosphere. High-resolution transmission electron microscopy (TEM) was used to obtain the size, composition, and mixing state of individual cloud residues and interstitial aerosols. Most of the cloud residues displayed distinct rims which were found to consist of soluble organic matter (OM). Nearly all (91.7%) cloud residues were attributed to sulfate-related salts (the remainder was mostly coarse crustal dust particles with nitrate coatings). Half the salt particles were internally mixed with two or more refractory particles (e.g., soot, fly ash, crustal dust, CaSO 4, and OM). A comparison between cloud residues and interstitial particles shows that the former contained more salts and were of larger particle size than the latter. In addition, a somewhat high number scavenging ratio of 0.54 was observed during cloud formation. Therefore, the mixtures of salts with OMs account for most of the cloud-nucleating ability of the entire aerosol population in the polluted air of northern China. We advocate that both size and composition - the two influential, controlling factors for aerosol activation - should be built into all regional climate models of China.

A D- and N-15-Rich Micrometer-Sized Aggregate of Organic Matter in a Xenolithic Clast from the Zag Ordinary Chondrite

NASA Technical Reports Server (NTRS)

Kebukawa, Yoko; Ito, Motoo; Zolensky, Michael E.; Rahman, Zia; Suga, Hiroki; Nakato, Aiko; Chan, Queenie H. S.; Fries, Marc; Takeichi, Yasuo; Takahashi, Yoshio;

Enhancement of particle aggregation in the presence of organic matter during neutralization of acid drainage in a stream confluence and its effect on arsenic immobilization.

PubMed

Arce, Guillermo; Montecinos, Mauricio; Guerra, Paula; Escauriaza, Cristian; Coquery, Marina; Pastén, Pablo

2017-08-01

Acid drainage (AD) is an important environmental concern that impacts water quality. The formation of reactive Fe and Al oxyhydroxides during the neutralization of AD at river confluences is a natural attenuation process. Although it is known that organic matter (OM) can affect the aggregation of Fe and Al oxyhydroxides and the sorption of As onto their surfaces, the role of OM during the neutralization of AD at river confluences has not been studied. Field and experimental approaches were used to understand this role, using the Azufre River (pH 2) - Caracarani River (pH 8.6) confluence (northern Chile) as model system. Field measurements of organic carbon revealed a 10-15% loss of OM downstream the confluence, which was attributed to associations with Fe and Al oxyhydroxides that settle in the river bed. Laboratory mixtures of AD water with synthetic Caracarani waters under varying conditions of pH, concentration and type of OM revealed that OM promoted the aggregation of Fe oxyhydroxides without reducing As sorption, enhancing the removal of As at slightly acidic conditions (pH ∼4.5). At acidic conditions (pH ∼3), aggregation of OM - metal complexes at high OM concentrations could become the main removal mechanism. One type of OM promoted bimodal particle size distributions with larger mean sizes, possibly increasing the settling velocity of aggregates. This work contributes to a better understanding of the role of OM in AD affected basins, showing that the presence of OM during processes of neutralization of AD can enhance the removal of toxic elements. Copyright © 2017 Elsevier Ltd. All rights reserved.

Response surface model for predicting chronic toxicity of cadmium to Paronychiurus kimi (Collembola), with a special emphasis on the importance of soil characteristics in the reproduction test.

PubMed

Son, Jino; Shin, Key-il; Cho, Kijong

2009-11-01

A central composite design (CCD) was employed to investigate the effects of organic matter (OM) content and soil pH on the reproduction, and chronic toxicity (28-d EC(50-reproduction)) of cadmium for Paronychiurus kimi after 28days exposure in a standard artificial soil. Two statistical models were developed, one describing reproduction in control artificial soils as a function of OM content and pH, and the other describing cadmium toxicity to the same soil parameters. In the reproduction model, pH was the most important factor, followed by two quadratic factors of OM(2) and pH(2). The parameter pH alone could explain 75.5% of the response variation. The reproduction model will allow us to predict a mean reproduction in the non-treated control soils that contain various combinations of OM content and different pH values. In the chronic toxicity model, only the linear factor of the OM content and pH significantly (p<0.05) affect cadmium toxicity, which explains the 78.9% and 14.9% of total response variance, respectively. Therefore, the final polynomial regression describing the chronic toxicity of cadmium to P. kimi is as follows: predicted 28-d EC(50) of cadmium (mgkg(-1))=-21.231+2.794 x OM+4.874 x pH. The present study show that soil characteristics, which can alter the toxicity of cadmium, can also act as stressors themselves in regards to the reproduction of P. kimi. Based on the physico-chemical characteristics of the test media, the response surface model developed in this study can be used to provide initial toxicity information for cadmium within a region of interest in terms of OM content and pH, and may lead to more scientific based risk assessment for metals.

Effective removal of effluent organic matter (EfOM) from bio-treated coking wastewater by a recyclable aminated hyper-cross-linked polymer.

PubMed

Yang, Wenlan; Li, Xuchun; Pan, Bingcai; Lv, Lu; Zhang, Weiming

2013-09-01

Effluent organic matter (EfOM) is a complex matrix of organic substance mainly from bio-treated sewage effluent and is considered as the main constraint to further advanced treatment. Here a recyclable aminated hyper-cross-linked polymeric adsorbent (NDA-802) featured with aminated functional groups, large specific surface area, and sufficient micropore region was synthesized for effective removal of EfOM from the bio-treated coking wastewater (BTCW), and its removal characteristics was investigated. It was found that hydrophobic fraction was the main constituent (64.8% of DOC) in EfOM of BTCW, and the hydrophobic-neutral fraction had the highest SUVA level (7.06 L mg(-1) m(-1)), which were significantly different from that in the domestic wastewater. Column adsorption experiments showed that NDA-802 exhibited much higher removal efficiency of EfOM than other polymeric adsorbents D-301, XAD-4, and XAD-7, and the efficiency could be readily sustained according to continuous 28-cycle batch adsorption-regeneration experiments. Moreover, dissolved organic matter (DOM) fractionation and excitation-emission matrix (EEM) fluorescence spectroscopy study indicated that NDA-802 showed attractive adsorption preference as well as high removal efficiency of hydrophobic and aromatic compounds. Possibly ascribed to the presence of functional aminated groups, relatively large specific surface area and micropore region of the unique polymer, NDA-802 possesses high and sustained efficiency for the removal of EfOM, and provides a potential alternative for the advanced treatment. Copyright © 2013 Elsevier Ltd. All rights reserved.

Benthic biological and biogeochemical patterns and processes across an oxygen minimum zone (Pakistan margin, NE Arabian Sea)

NASA Astrophysics Data System (ADS)

Cowie, Gregory L.; Levin, Lisa A.

2009-03-01

Oxygen minimum zones (OMZs) impinging on continental margins present sharp gradients ideal for testing environmental factors thought to influence C cycling and other benthic processes, and for identifying the roles that biota play in these processes. Here we introduce the objectives and initial results of a multinational research program designed to address the influences of water depth, the OMZ (˜150-1300 m), and organic matter (OM) availability on benthic communities and processes across the Pakistan Margin of the Arabian Sea. Hydrologic, sediment, and faunal characterizations were combined with in-situ and shipboard experiments to quantify and compare biogeochemical processes and fluxes, OM burial efficiency, and the contributions of benthic communities, across the OMZ. In this introductory paper, we briefly review previous related work in the Arabian Sea, building the rationale for integrative biogeochemical and ecological process studies. This is followed by a summary of individual volume contributions and a brief synthesis of results. Five primary stations were studied, at 140, 300, 940, 1200 and 1850 m water depth, with sampling in March-May (intermonsoon) and August-October (late-to-postmonsoon) 2003. Taken together, the contributed papers demonstrate distinct cross-margin gradients, not only in oxygenation and sediment OM content, but in benthic community structure and function, including microbial processes, the extent of bioturbation, and faunal roles in C cycling. Hydrographic studies demonstrated changes in the intensity and extent of the OMZ during the SW monsoon, with a shoaling of the upper OMZ boundary that engulfed the previously oxygenated 140-m site. Oxygen profiling and microbial process rate determinations demonstrated dramatic differences in oxygen penetration and consumption across the margin, and in the relative importance of anaerobic processes, but surprisingly little seasonal change. A broad maximum in sediment OM content occurred on the upper slope, roughly coincident with the OMZ; but the otherwise poor correlation with bottom-water oxygen concentrations indicated that other factors are important in determining sediment OM distributions. Downcore profiles generally showed little clear evidence of in-situ OM alteration, and there was little sign of OM enrichment resulting from the southwest monsoon in sediments collected in the late-to-postmonsoon sampling. This is interpreted to be due to rapid cycling of labile OM. Organic geochemical studies confirmed that sediment OM is overwhelmingly of marine origin across the margin, but also that it is heavily altered, with only small changes in degradation state across the OMZ. More negative stable C isotopic compositions in surficial sediments at hypoxic sites within the OMZ core are attributed to a chemosynthetic bacterial imprint. Dramatic changes in benthic community structure occurred across the lower OMZ transition, apparently related to OM availability and quality as well as to DO concentrations. High-resolution sampling, biomarkers and isotope tracer studies revealed that oxygen availability appears to exert threshold-type controls on benthic community structure and early faunal C processing. Biomarker studies also provided evidence of faunal influence on sediment OM composition. Together, the results offer strong evidence that benthic fauna at sites across the margin play important roles in the early cycling of sediment OM through differential feeding and bioturbation activities.

Physical Processes Dictate Early Biogeochemical Dynamics of Soil Pyrogenic Organic Matter in a Subtropical Forest Ecosystem

NASA Astrophysics Data System (ADS)

Stuart, Jason M.; Anderson, Russell; Lazzarino, Patrick; Kuehn, Kevin A.; Harvey, Omar R.

2018-05-01

Quantifying links between pyOM dynamics, environmental factors and processes is central to predicting ecosystem function and response to future perturbations. In this study, changes in carbon (TC), nitrogen (TN) , pH and relative recalcitrance (R50) for pine- and cordgrass-derived pyOM were measured at 3-6 weeks intervals throughout the first year of burial in the soil. Objectives were to 1) identify key environmental factors and processes driving early-stage pyOM dynamics, and 2) develop quantitative relationships between environmental factors and changes in pyOM properties. The study was conducted in sandy soils of a forested ecosystem in the Longleaf pine range, US with a focus on links between changes in pyOM properties, fire history (FH), cumulative precipitation (Pcum), average temperature (Tavg) and soil residence time (SRT). Pcum, SRT and Tavg were the main factors controlling TC and TN accounting for 77-91% and 64-96% of their respective variability. Fire history, along with Pcum, SRT and Tavg, exhibited significant controlling effects on pyOM, pH and R50 - accounting for 48-91% and 88-93% of respective variability. Volatilization of volatiles and leaching of water-soluble components (in summer) and the sorption of exogenous organic matter (fall through spring) were most plausibly controlling pyOM dynamics in this study. Overall, our results point to climatic and land management factors and physicochemical process as the main drivers of pyOM dynamics in the pine ecosystems of the Southeastern US.

Burning transformations: Fire history effects on organic matter processing from hillslopes to streams

NASA Astrophysics Data System (ADS)

Barnes, R. T.; Gilbertson, A.; Maxwell, K.

2017-12-01

Disturbance strongly regulates material and energy flows, changing ecosystem pattern and process. An increase in the size and severity of fire, particularly in the Intermountain West, over the last several decades is expected to continue due to a warming climate. Predicting how fire will alter the net ecosystem carbon balance requires us to understand how carbon is stored, processed, and transferred. Here we present results from paired watersheds focused on five 2002 severe fires in Colorado to examine how organic matter is processed along the hillslope and within the stream. Comparing soil samples and water extractable organic matter (WEOM) between burned and unburned sites illustrates the impact of fire: burned soils have 50% organic matter (OM) content as unburned soils, regardless of geomorphic position. While a smaller pool, soil OM (SOM) in burned sites is more susceptible to microbial degradation (p<0.001 for 4 of 6 sites), especially in systems with slower vegetative recovery. This is explained, in part, to the water extractable organic matter (WEOM) from unburned soils having a higher C:N than burned sites (p<0.02). This shift in SOM quality is likely due to differing OM inputs (e.g. grasses and forbes vs. trees in burned vs. unburned sites). Comparing results from intact soil column experiments to soil extractions and stream samples, suggests that the majority of this soil derived WEOM does not make it to the stream, potentially getting sorbed deeper in the mineral rich, organic poor, portion of the soil. Interestingly, the systematic shifts in OM amounts and quality (as measured by SUVA, E2:E3, and fluorescence) within the terrestrial system in response to fire, are not seen in stream exports. As such, while there are significant relationships (p<0.05) between stream DOM quality, DOM bioavailability, and stream metabolism, burned watersheds are not exporting DOM that is more bioavailable. In addition, despite different terrestrial OM pools, burned and unburned watersheds export statistically similar amounts of DOM per unit area, suggesting that a larger fraction of OM is transferred from the terrestrial to aquatic ecosystem within fire affected landscapes.

Sources and distribution of sedimentary organic matter along the Andong salt marsh, Hangzhou Bay

NASA Astrophysics Data System (ADS)

Yuan, Hong-Wei; Chen, Jian-Fang; Ye, Ying; Lou, Zhang-Hua; Jin, Ai-Min; Chen, Xue-Gang; Jiang, Zong-Pei; Lin, Yu-Shih; Chen, Chen-Tung Arthur; Loh, Pei Sun

2017-10-01

Lignin oxidation products, δ13C values, C/N ratios and particle size were used to investigate the sources, distribution and chemical stability of sedimentary organic matter (OM) along the Andong salt marsh located in the southwestern end of Hangzhou Bay, China. Terrestrial OM was highest at the upper marshes and decreased closer to the sea, and the distribution of sedimentary total organic carbon (TOC) was influenced mostly by particle size. Terrestrial OM with a C3 signature was the predominant source of sedimentary OM in the Spartina alterniflora-dominated salt marsh system. This means that aside from contributions from the local marsh plants, the Andong salt marsh received input mostly from the Qiantang River and the Changjiang Estuary. Transect C, which was situated nearer to the Qiantang River mouth, was most likely influenced by input from the Qiantang River. Likewise, a nearby creek could be transporting materials from Hangzhou Bay into Transect A (farther east than Transect C), as Transect A showed a signal resembling that of the Changjiang Estuary. The predominance of terrestrial OM in the Andong salt marsh despite overall reductions in sedimentary and terrestrial OM input from the rivers is most likely due to increased contributions of sedimentary and terrestrial OM from erosion. This study shows that lower salt marsh accretion due to the presence of reservoirs upstream may be counterbalanced by increased erosion from the surrounding coastal areas.

Organic matter chlorination rates in different boreal soils: the role of soil organic matter content.

PubMed

Gustavsson, Malin; Karlsson, Susanne; Oberg, Gunilla; Sandén, Per; Svensson, Teresia; Valinia, Salar; Thiry, Yves; Bastviken, David

2012-02-07

Transformation of chloride (Cl(-)) to organic chlorine (Cl(org)) occurs naturally in soil but it is poorly understood how and why transformation rates vary among environments. There are still few measurements of chlorination rates in soils, even though formation of Cl(org) has been known for two decades. In the present study, we compare organic matter (OM) chlorination rates, measured by (36)Cl tracer experiments, in soils from eleven different locations (coniferous forest soils, pasture soils and agricultural soils) and discuss how various environmental factors effect chlorination. Chlorination rates were highest in the forest soils and strong correlations were seen with environmental variables such as soil OM content and Cl(-) concentration. Data presented support the hypothesis that OM levels give the framework for the soil chlorine cycling and that chlorination in more organic soils over time leads to a larger Cl(org) pool and in turn to a high internal supply of Cl(-) upon dechlorination. This provides unexpected indications that pore water Cl(-) levels may be controlled by supply from dechlorination processes and can explain why soil Cl(-) locally can be more closely related to soil OM content and the amount organically bound chlorine than to Cl(-) deposition.

Nitrogen removal performance of anaerobic ammonia oxidation (ANAMMOX) in presence of organic matter.

PubMed

Zhu, Weiqiang; Zhang, Peiyu; Yu, Deshuang; Dong, Huiyu; Li, Jin

2017-06-01

A sequencing batch reactor (SBR) was used to test the nitrogen removal performance of anaerobic ammonium oxidation (ANAMMOX) in presence of organic matter. Mesophilic operation (30 ± 0.5 °C) was performed with influent pH 7.5. The results showed, independent of organic matter species, ANAMMOX reaction was promoted when COD was lower than 80 mg/L. However, specific ANAMMOX activity decreased with increasing organic matter content. Ammonium removal efficiency decreased to 80% when COD of sodium succinate, sodium potassium tartrate, peptone and lactose were 192.5, 210, 225 and 325 mg/L, respectively. The stoichiometry ratio resulting from different OM differed largely and R 1 could be as an indicator for OM inhibition. When COD concentration was 240 mg/L, the loss of SAA resulting from lactose, peptone, sodium potassium tartrate and sodium succinate were 28, 36, 50 and 55%, respectively. Sodium succinate had the highest inhibitory effect on SAA. When ANAMMOX process was used to treat wastewater containing OM, the modified Logistic model could be employed to predict the NRE max .

Persistence of soil organic matter in eroding versus depositional landform positions

USGS Publications Warehouse

Berhe, Asmeret Asefaw; Harden, Jennifer W.; Torn, Margaret S.; Kleber, Markus; Burton, Sarah D.; Harte, John

2012-01-01

Soil organic matter (SOM) processes in dynamic landscapes are strongly influenced by soil erosion and sedimentation. We determined the contribution of physical isolation of organic matter (OM) inside aggregates, chemical interaction of OM with soil minerals, and molecular structure of SOM in controlling storage and persistence of SOM in different types of eroding and depositional landform positions. By combining density fractionation with elemental and spectroscopic analyses, we showed that SOM in depositional settings is less transformed and better preserved than SOM in eroding landform positions. However, which environmental factors exert primary control on storage and persistence of SOM depended on the nature of the landform position considered. In an annual grassland watershed, protection of SOM by physical isolation inside aggregates and chemical association of organic matter (complexation) with soil minerals, as assessed by correlation with radiocarbon concentration, were more effective in the poorly drained, lowest-lying depositional landform positions, compared to well-drained landform positions in the upper parts of the watershed. Results of this study demonstrated that processes of soil erosion and deposition are important mechanisms of long-term OM stabilization.

Organic matter quantity and quality, metals availability and foraminiferal assemblages as environmental proxy applied to the Bizerte Lagoon (Tunisia).

PubMed

Martins, Maria Virgínia Alves; Helali, Mohamed Amine; Zaaboub, Noureddine; Boukef-BenOmrane, Imen; Frontalini, Fabrizio; Reis, Darlly; Portela, Helena; Clemente, Iara Martins Matos Moreira; Nogueira, Leandro; Pereira, Egberto; Miranda, Paulo; El Bour, Monia; Aleya, Lotfi

2016-04-15

This study analyzes the benthic trophic state of Bizerte Lagoon (Tunisia) based on the total organic matter and the bioavailability of biopolymeric carbon including proteins (PTN), carbohydrates (CHO), lipids (LIP), chlorophyll a, as well as bacteria counts. The overall simultaneously extracted metals (SEM), and acid volatile sulfides (AVS) as well as the SEM/AVS ratio indicative of the toxicity of the sediments also were analyzed aiming to study their impact in the dimension, composition and structure of both dead and living benthic foraminiferal assemblages. In the studied sites TOC content is relatively high and the PTN/CHO values indicate that they can be considered as meso-eutrophic environments. The CHO/TOC and C/N values suggest that the OM which accumulated on the sediments surface has mainly natural origin despite the introduction of municipal and industrial effluents in the lagoon and the large bacterial pool. The living assemblages of benthic foraminifera of Bizerte Lagoon are quite different to other Mediterranean transitional systems studied until now. They are composed of typical lagoonal species but also include several marine and opportunistic species including significant numbers of bolivinids, buliminids, Nonionella/Nonionoides spp. and Cassidulina/Globocassidulina spp. These assemblages seem to benefitfrom the physicochemical parameters and the sediment stability. They may however face environmental stress in the lagoon related to the AVS production as a result of the organic matter degradation and toxicity in some areas due to the available concentrations of metals. Nonetheless statistical results evidence that the structure and dimension of assemblages are being controlled mostly by OM quantity and quality related mainly to the availability of PTN, CHO and chlorophyll a. Results of this work support the importance of considering OM quantity and quality in studies of environmental impact in coastal systems. Copyright © 2016 Elsevier Ltd. All rights reserved.

Characterization and effect of year of harvest on the nutritional properties of three varieties of white lupine (Lupinus albus L.).

PubMed

Calabrò, Serena; Cutrignelli, Monica I; Lo Presti, Vittorio; Tudisco, Raffaella; Chiofalo, Vincenzo; Grossi, Micaela; Infascelli, Federico; Chiofalo, Biagina

2015-12-01

Three cultivars of Lupinus albus L. (Lutteur, Lublanca and Multitalia) were assessed for proximate composition, fatty acids, alkaloids and in vitro fermentation characteristics over three harvest years. The chemical composition varied greatly during the three harvest years. Crude protein content ranged from 353 to 456 g kg(-1) dry matter (DM), neutral detergent fiber content from 209 to 321 g kg(-1) DM and lignin content from 3.0 to 63.9 g kg(-1) DM. Lublanc showed the highest crude protein (417 g kg(-1) DM) and lignin (35 g kg(-1) DM) contents. High levels of lipids (89.9 g kg(-1) DM) and starch (93.3 g kg(-1) DM) were found in all samples. Alkaloid content ranged from 3.63 to 165 mg per 100 g. Lutteur and Lublanc showed more favorable n-3/n-6 polyunsaturated fatty acid ratios (from 0.44 to 0.73) and lower values of the anti-quality factor 'erucic acid' (from 5.8 to 20.9 g kg(-1) ) than Multitalia. Lutteur showed higher degradability (897 g kg(-1) ), gas production (330 mL g(-1) organic matter (OM)) and volatile fatty acid production (117 mmol g(-1) OM) than the other varieties. The present data suggest L. albus L. cv. Lutteur to be a promising crop as food thanks to its high nutritive traits and most constant yield over time. © 2014 Society of Chemical Industry.

Sigma omega meson coupling and properties of nuclei and nuclear matter

NASA Astrophysics Data System (ADS)

Haidari, Maryam M.; Sharma, Madan M.

2008-05-01

We have constructed a Lagrangian model with a coupling of σ and ω mesons in the relativistic mean-field theory. Properties of finite nuclei and nuclear matter are explored with the new Lagrangian model SIG-OM. The study shows that an excellent description of binding energies and charge radii of nuclei over a large range of isospin is achieved with SIG-OM. With an incompressibility of nuclear matter K=265 MeV, it is also able to describe the breathing-mode isoscalar giant monopole resonance energies appropriately. It is shown that the high-density behaviour of the equation of state of nuclear and neutron matter with the σ-ω coupling is much softer than that of the non-linear scalar coupling model.

Effects of different ratios and storage periods of liquid brewer's yeast mixed with cassava pulp on chemical composition, fermentation quality and in vitro ruminal fermentation.

PubMed

Kamphayae, Sukanya; Kumagai, Hajime; Angthong, Wanna; Narmseelee, Ramphrai; Bureenok, Smerjai

2017-04-01

This study aims to evaluate the chemical composition, fermentation quality and in vitro ruminal fermentation of various ratios and storage periods of liquid brewer's yeast (LBY) mixed with cassava pulp (CVP). Four mixtures of fresh LBY and CVP were made (LBY0, LBY10, LBY20, and LBY30 for LBY:CVP at 0:100, 10:90, 20:80, and 30:70, respectively) on a fresh matter basis, in 500 g in plastic bags and stored at 30 to 32°C. After storage, the bags were opened weekly from weeks 0 to 4. Fermentation quality and in vitro gas production (IVGP) were determined, as well as the dry matter (DM), organic matter (OM), crude protein (CP), ether extract (EE), neutral detergent fiber, acid detergent fiber and acid detergent lignin contents. The contents of CP and EE increased, whereas all other components decreased, in proportion to LBY inclusion (p<0.01). The DM and OM contents gradually decreased in weeks 3 and 4 (p<0.05), while EE contents were lowest in week 0. The pH, ammonia nitrogen per total nitrogen (NH 3 -N/TN) and V-score in each mixture and storage period demonstrated superior fermentation quality (pH≤4.2, NH 3 -N/TN≤12.5%, and V-score>90%). The pH increased and NH 3 -N/TN decreased, with proportionate increases of LBY, whereas the pH decreased and NH 3 -N/TN increased, as the storage periods were extended (p<0.01). Although IVGP decreased in proportion to the amount of LBY inclusion (p<0.01), in vitro organic matter digestibility (IVOMD) was unaffected by the mixture ratios. The highest IVGP and IVOMD were observed in week 0 (p<0.01). The inclusion of LBY (as high as 30%) into CVP improves the chemical composition of the mixture, thereby increasing the CP content, while decreasing IVGP, without decreasing fermentation quality and IVOMD. In addition, a preservation period of up to four weeks can guarantee superior fermentation quality in all types of mixtures. Therefore, we recommend limiting the use of CVP as a feed ingredient, given its low nutritional value and improving feed quality with the inclusion of LBY.

Influence of fertilisation regimes on a nosZ-containing denitrifying community in a rice paddy soil.

PubMed

Chen, Zhe; Hou, Haijun; Zheng, Yan; Qin, Hongling; Zhu, Yijun; Wu, Jinshui; Wei, Wenxue

2012-03-30

Denitrification is a microbial process that has received considerable attention during the past decade since it can result in losses of added nitrogen fertilisers from agricultural soils. Paddy soil has been known to have strong denitrifying activity, but the denitrifying microorganisms responsible for fertilisers in paddy soil are not well known. The objective of this study was to explore the impacts of 17-year application of inorganic and organic fertiliser (rice straw) on the abundance and composition of a nosZ-denitrifier community in paddy soil. Soil samples were collected from CK plots (no fertiliser), N (nitrogen fertiliser), NPK (nitrogen, phosphorus and potassium fertilisers) and NPK + OM (NPK plus organic matter). The nitrous oxide reductase gene (nosZ) community composition was analysed using terminal restriction fragment length polymorphism, and the abundance was determined by quantitative PCR. Both the largest abundance of nosZ-denitrifier and the highest potential denitrifying activity (PDA) occurred in the NPK + OM treatment with about four times higher than that in the CK and two times higher than that in the N and NPK treatments (no significant difference). Denitrifying community composition differed significantly among fertilisation treatments except for the comparison between CK and N treatments. Of the measured abiotic factors, total organic carbon was significantly correlated with the observed differences in community composition and abundance (P < 0.01 by Monte Carlo permutation). This study shows that the addition of different fertilisers affects the size and composition of the nosZ-denitrifier community in paddy soil. Copyright © 2011 Society of Chemical Industry.

Spatio-temporal variations in the composition of organic matter in surface sediments of a mangrove receiving shrimp farm effluents (New Caledonia).

PubMed

Aschenbroich, Adélaïde; Marchand, Cyril; Molnar, Nathalie; Deborde, Jonathan; Hubas, Cédric; Rybarczyk, Hervé; Meziane, Tarik

2015-04-15

In order to investigate spatio-temporal variations in the composition and origin of the benthic organic matter (OM) at the sediment surface in mangrove receiving shrimp farm effluents, fatty acid (FA) biomarkers, natural stable isotopes (δ(13)C and δ(15)N), C:N ratios and chlorophyll-a (chl-a) concentrations were determined during the active and the non-active period of the farm. Fatty acid compositions in surface sediments within the mangrove forest indicated that organic matter inputs varied along the year as a result of farm activity. Effluents were the source of fresh particulate organic matter for the mangrove, as evidenced by the unsaturated fatty acid (UFA) distribution. The anthropogenic MUFA 18:1ω9 was not only accumulated at the sediment surface in some parts of the mangrove, but was also exported to the seafront. Direct release of bacteria and enhanced in situ production of fungi, as revealed by specific FAs, stimulated mangrove litter decomposition under effluent runoff condition. Also, microalgae released from ponds contributed to maintain high benthic chl-a concentrations in mangrove sediments in winter and to a shift in microphytobenthic community assemblage. Primary production was high whether the farm released effluent or not which questioned the temporary effect of shrimp farm effluent on benthic microalgae dynamic. This study outlined that mangrove benthic organic matter was qualitatively and quantitatively affected by shrimp farm effluent release and that responses to environmental condition changes likely depended on mangrove stand characteristics. Copyright © 2015 Elsevier B.V. All rights reserved.

Fate of lignin, cutin and suberin in soil organic matter fractions - an incubation experiment

NASA Astrophysics Data System (ADS)

Mueller, Carsten W.; Mueller, Kevin E.; Freeman, Katherine H.; Ingrid, Kögel-Knabner

2010-05-01

The turnover of soil organic matter (SOM) is controlled by its chemical composition, its spatial accessibility and the association with the mineral phase. Separation of bulk soils by physical fractionation and subsequent chemical analysis of these fractions should give insights to how compositional differences in SOM drive turnover rates of different size-defined carbon pools. The main objective of this study was to elucidate the relative abundance and recalcitrance of lignin, cutin and suberin in aggregated bulk soils and SOM fractions in the course of SOM decomposition. Bulk soils and physically-separated size fractions (sand, silt and clay) of the Ah horizon of a forest soil (under Picea abies L.Karst) were parallel incubated over a period of one year. In order to differentiate between particulate OM (POM) and mineral-associated SOM the particle size fractions were additionally separated by density after the incubation experiment. We used solid-state 13C-CPMAS NMR spectroscopy and GC-MS (after copper oxide oxidation and solvent extraction) to analyze the composition of the incubated samples. The abundance and isotopic composition (including 13C and 14C) of the respired CO2 further enabled us to monitor the dynamics of SOM mineralization. This approach allowed for differentiating between C stabilization of soil fractions due to accessibility/aggregation and to biochemical recalcitrance at different scales of resolution (GC-MS, NMR). We found a relative enrichment of alkyl C and decreasing lignin contents in the order of sand < silt < clay by 13C-NMR spectroscopy and GC-MS within soils and fractions before the incubation, resulting in increased lipid to lignin ratios with decreasing particle size. An accumulation of aliphatic C compounds was especially found for the small silt and clay sized particulate OM (POM). For the fresh particulate OM (POM) of the sand fraction a clear decay of lignin was observed in the course of the incubation experiment, indicated by decreasing C/V and increasing ac/alV ratios. A relative decrease of aliphatic C in the incubated fractions compared to the incubated bulk soils showed the preferential mineralization of less recalcitrant C compounds that were spatially inaccessible in aggregates of the bulk soil. Differences in the abundance of lignin monomers, hydroxyl acids, n-alkanols and n-fatty acid methyl esters measured by GC MS before and after the incubation indicated selective degradation and preservation patterns at the molecular scale.

Unseen players shape benthic competition on coral reefs.

PubMed

Barott, Katie L; Rohwer, Forest L

2012-12-01

Recent work has shown that hydrophilic and hydrophobic organic matter (OM) from algae disrupts the function of the coral holobiont and promotes the invasion of opportunistic pathogens, leading to coral morbidity and mortality. Here we refer to these dynamics as the (3)DAM [dissolved organic matter (DOM), direct contact, disease, algae and microbes] model. There is considerable complexity in coral-algae interactions; turf algae and macroalgae promote heterotrophic microbial overgrowth of coral, macroalgae also directly harm the corals via hydrophobic OM, whereas crustose coralline algae generally encourage benign microbial communities. In addition, complex flow patterns transport OM and pathogens from algae to downstream corals, and direct algal contact enhances their delivery. These invisible players (microbes, viruses, and OM) are important drivers of coral reefs because they have non-linear responses to disturbances and are the first to change in response to perturbations, providing near real-time trajectories for a coral reef, a vital metric for conservation and restoration. Copyright © 2012 Elsevier Ltd. All rights reserved.

Ferrihydrite-associated organic matter (OM) stimulates reduction by Shewanella oneidensis MR-1 and a complex microbial consortia

NASA Astrophysics Data System (ADS)

Cooper, Rebecca Elizabeth; Eusterhues, Karin; Wegner, Carl-Eric; Totsche, Kai Uwe; Küsel, Kirsten

2017-11-01

The formation of Fe(III) oxides in natural environments occurs in the presence of natural organic matter (OM), resulting in the formation of OM-mineral complexes that form through adsorption or coprecipitation processes. Thus, microbial Fe(III) reduction in natural environments most often occurs in the presence of OM-mineral complexes rather than pure Fe(III) minerals. This study investigated to what extent does the content of adsorbed or coprecipitated OM on ferrihydrite influence the rate of Fe(III) reduction by Shewanella oneidensis MR-1, a model Fe(III)-reducing microorganism, in comparison to a microbial consortium extracted from the acidic, Fe-rich Schlöppnerbrunnen fen. We found that increased OM content led to increased rates of microbial Fe(III) reduction by S. oneidensis MR-1 in contrast to earlier findings with the model organism Geobacter bremensis. Ferrihydrite-OM coprecipitates were reduced slightly faster than ferrihydrites with adsorbed OM. Surprisingly, the complex microbial consortia stimulated by a mixture of electrons donors (lactate, acetate, and glucose) mimics S. oneidensis under the same experimental Fe(III)-reducing conditions suggesting similar mechanisms of electron transfer whether or not the OM is adsorbed or coprecipitated to the mineral surfaces. We also followed potential shifts of the microbial community during the incubation via 16S rRNA gene sequence analyses to determine variations due to the presence of adsorbed or coprecipitated OM-ferrihydrite complexes in contrast to pure ferrihydrite. Community profile analyses showed no enrichment of typical model Fe(III)-reducing bacteria, such as Shewanella or Geobacter sp., but an enrichment of fermenters (e.g., Enterobacteria) during pure ferrihydrite incubations which are known to use Fe(III) as an electron sink. Instead, OM-mineral complexes favored the enrichment of microbes including Desulfobacteria and Pelosinus sp., both of which can utilize lactate and acetate as an electron donor under Fe(III)-reducing conditions. In summary, this study shows that increasing concentrations of OM in OM-mineral complexes determines microbial Fe(III) reduction rates and shapes the microbial community structure involved in the reductive dissolution of ferrihydrite. Similarities observed between the complex Fe(III)-reducing microbial consortia and the model Fe(III)-reducer S. oneidensis MR-1 suggest electron-shuttling mechanisms dominate in OM-rich environments, including soils, sediments, and fens, where natural OM interacts with Fe(III) oxides during mineral formation.

PM2.5 source apportionment in the southeastern U.S.: Spatial and seasonal variations during 2001-2005

NASA Astrophysics Data System (ADS)

Chen, Yingjun; Zheng, Mei; Edgerton, Eric S.; Ke, Lin; Sheng, Guoying; Fu, Jiamo

2012-04-01

The seasonal and spatial variations of source contributions of 112 composite fine particulate matter (PM2.5) samples collected in the Southeastern Aerosol Research and Characterization Study (SEARCH) monitoring network during 2001-2005 using molecular marker-based chemical mass balance (CMB-MM) model were determined. The lowest PM2.5 concentration occurs in January with higher values in warm months (maxima in July at four inland sites versus October at the coastal sites). Sulfate shows a similar pattern and plays a primary role in PM2.5 seasonality. Carbonaceous material (organic matter plus EC) exhibits less seasonality, but more spatial variations between the inland and coastal sites. Compared with the data at coastal sites, source attributions of diesel exhaust, gasoline exhaust, other organic matter (other OM), secondary sulfate, nitrate, and ammonium in PM2.5 mass at inland sites are higher. The difference in source attributions of wood combustion, meat cooking, vegetative detritus, and road dust among the eight sites is not significant. Contributions of eight primary sources to fine OC are wood burning (17 ± 19%), diesel exhaust (9 ± 4%), gasoline exhaust (5 ± 7%), meat cooking (5 ± 5%), road dust (2 ± 3%), vegetative detritus (2 ± 2%), cigarette smoke (2 ± 2% at four urban sites), and coke production (2 ± 1% only at BHM). Primary and secondary sources explain 82-100% of measured PM2.5 mass at the eight sites, including secondary ionic species (SO42-, NH4+, and NO3-; 41.4 ± 5.7%), identified OM (24.9 ± 11.3%), "other OM" (unexplained OM, 23.3 ± 10.3%), and "other mass" (11.4 ± 9.6%). Vehicle exhaust from both diesel and gasoline contributes the lowest fraction to PM2.5 mass in July and higher fractions at BHM and JST than other sites. Wood combustion, in contrast, contributes significantly to a larger fraction in winter than in summer. Road dust shows relatively high levels in July and April across the eight sites, while minor sources such as meat cooking and other sources (e.g., vegetative detritus, coke production, and cigarette smoke) show relatively small seasonal and spatial variations in the SEARCH monitoring network.

Effect of sediment composition on methane concentration and production in the transition zone of a mangrove (Sepetiba Bay, Rio de Janeiro, Brazil).

PubMed

Marinho, C C; Campos, E A; Guimarães, J R D; Esteves, F A

2012-08-01

The aim of this research was to evaluate the effect of sediment composition on methane (CH4) dynamics in sediments of different areas in the transition zone between a mangrove and the sea. This research was conducted in a mangrove at Coroa Grande, on the southern coast of Rio de Janeiro. Samples were collected at three stations: (1) region colonised by Rhizophora mangle L. on the edge of the mangrove, (2) region colonised by seagrasses and (3) infra-littoral region without vegetation. Samples were collected from the surface layer of the sediment to determine the concentrations of nutrients (C, N and P) and CH4 concentration and production. We observed that concentrations of CH4 and carbon (C) were significantly higher (p < 0.05) in station 1 than station 3. The molar ratios (C:N, C:P and N:P) suggest that the origin of the substrate is mainly autochthonous. Methanogenesis was initially low, possibly due to competition between methanogens and sulfate reducers, and increased significantly (p < 0.05) on the twenty-sixth day in the sediment of station 1, probably due to higher organic matter (OM) availability in this region. Results indicate that methanogenic activity observed herein is not regulated by the amount or quality of OM, but by other factors. The concentration of CH4 in the sea-land ecotone at Mangrove Coroa Grande is a function of available OM suggesting a possible inhibition of methanotrophy by intense oxygen consumption in the soil surface covered by detritus of Rhizophora mangle vegetation.

Sorption of Groundwater Dissolved Organic Carbon onto Minerals

NASA Astrophysics Data System (ADS)

Rutlidge, H.; Oudone, P.; McDonough, L.; Meredith, K.; Andersen, M. S.; O'Carrol, D. M.; Baker, A.

2017-12-01

Our understanding of groundwater organic matter (OM) as a carbon source or sink in the environmental carbon cycle is limited. The dynamics of groundwater OM is mainly governed by biological processing and its sorption to minerals. In saturated groundwaters, dissolved OM (DOM) represents one part of the groundwater organic carbon pool. Without consideration of the DOM sorption, it is not possible to quantify governing groundwater OM processes. This research explores the rate and extent of DOM sorption on different minerals. Groundwater DOM samples, and International Humic Substances Society (IHSS) standard solutions, were analysed. Each was mixed with a range of masses of iron coated quartz, clean quartz, and calcium carbonate, and shaken for 2 hours to reach equilibrium before being filtered through 0.2 μm for total dissolved organic carbon (DOC) and composition analysis by size-exclusion chromatography-organic carbon detection (LC-OCD). Sorption isotherms were constructed and groundwater DOM sorption were compared to the sorption of IHSS standards. Initial results suggest that for the IHSS standards, the operationally-defined humic substances fraction had the strongest sorption compared to the other LC-OCD fractions and total DOC. Some samples exhibited a small increase in the low molecular weight neutral (LMW-N) aqueous concentration with increasing humic substances sorption. This gradual increase observed could be the result of humic substances desorbing or their breakdown during the experiment. Further results comparing these IHSS standards with groundwater samples will be presented. In conjunction with complementary studies, these results can help provide more accurate prediction of whether groundwater OM is a carbon source or sink, which will enable the management of the groundwater resources as part of the carbon economy.

Effects of surface-active organic matter on carbon dioxide nucleation in atmospheric wet aerosols: a molecular dynamics study.

PubMed

Daskalakis, Vangelis; Charalambous, Fevronia; Panagiotou, Fostira; Nearchou, Irene

2014-11-21

Organic matter (OM) uptake in cloud droplets produces water-soluble secondary organic aerosols (SOA) via aqueous chemistry. These play a significant role in aerosol properties. We report the effects of OM uptake in wet aerosols, in terms of the dissolved-to-gas carbon dioxide nucleation using molecular dynamics (MD) simulations. Carbon dioxide has been implicated in the natural rainwater as well as seawater acidity. Variability of the cloud and raindrop pH is assumed in space and time, as regional emissions, local human activities and geophysical characteristics differ. Rain scavenging of inorganic SOx, NOx and NH3 plays a major role in rain acidity in terms of acid-base activity, however carbon dioxide solubility also remains a key parameter. Based on the MD simulations we propose that the presence of surface-active OM promotes the dissolved-to-gas carbon dioxide nucleation in wet aerosols, even at low temperatures, strongly decreasing carbon dioxide solubility. A discussion is made on the role of OM in controlling the pH of a cloud or raindrop, as a consequence, without involving OM ionization equilibrium. The results are compared with experimental and computational studies in the literature.

Fine Aerosol Bulk Composition Measured on WP-3D Research Aircraft in Vicinity of the Northeastern United States - Results from NEAQS

NASA Technical Reports Server (NTRS)

Peltier, R. E.; Sullivan, A. P.; Weber, R. J.; Brock, C. A.; Wollny, A. G.; Holloway, J. S.; deGouw, J. A.; Warneke, C.

2007-01-01

During the New England Air Quality Study (NEAQS) in the summer of 2004, airborne measurements were made of the major inorganic ions and the water-soluble organic carbon (WSOC) of the submicron (PM(sub 1.0)) aerosol. These and ancillary data are used to describe the overall aerosol chemical characteristics encountered during the study. Fine particle mass was estimated from particle volume and a calculated density based on measured particle composition. Fine particle organic matter (OM) was estimated from WSOC and a mass balance analysis. The aerosol over the northeastern United States (U.S.) and Canada was predominantly sulfate and associated ammonium, and organic components, although in unique plumes additional ionic components were also periodically above detection limits. In power generation regions, and especially in the Ohio River Valley region, the aerosol tended to be predominantly sulfate (approximately 60% micro gram /micro gram) and apparently acidic, based on an excess of measured anions compared to cations. In all other regions where sulfate concentrations were lower and a smaller fraction of overall mass, the cations and anions were balanced suggesting a more neutral aerosol. In contrast, the WSOC and estimated OM were more spatially uniform and the fraction of OM relative to PM mass was largely influenced by sources of sulfate. The study median OM mass fraction was 40%. Throughout the study region, sulfate and organic aerosol mass were highest near the surface and decreased rapidly with increasing altitude. The relative fraction of organic mass to sulfate was similar throughout all altitudes within the boundary layer (altitude less than 2.5 km), but was significantly higher at altitude layers in the free troposphere (above 2.5 km). A number of distinct biomass burning plumes from fires in Alaska and the Yukon were periodically intercepted, mostly at altitudes between 3 and 4 km. These plumes were associated with highest aerosol concentrations of the study and were largely comprised of organic aerosol components (approximtely 60%).

Effect of nitrite on the formation of halonitromethanes during chlorination of organic matter from different origin

NASA Astrophysics Data System (ADS)

Hong, Huachang; Qian, Lingya; Xiao, Zhuoqun; Zhang, Jianqing; Chen, Jianrong; Lin, Hongjun; Yu, Haiying; Shen, Liguo; Liang, Yan

2015-12-01

Occurrence of halonitromethanes (HNMs) in drinking water has been a public concern due to the potential risks to human health. Though quite a lot of work has been carried out to understand the formation of HNMs, the relationship between HNMs formation and the nitrite remains unclear. In this study, the effects of nitrite on the formation of HNMs during chlorination of organic matter from different origin were assessed. Organic matter (OM) derived from phoenix tree (fallen leaves: FLOM; green leaves: GLOM) and Microcystis aeruginosa (intracellular organic matter: IOM) were used to mimic the allochthonous and autochthonous organic matter in surface water, respectively. Results showed that HNMs yields were significantly enhanced with the addition of nitrite, and the highest enhancement was observed for FLOM, successively followed by GLOM and IOM, suggesting that the contribution of nitrite to HNMs formation was positively related with SUVA (an indicator for aromaticity) of OM. Therefore, the nitrite contamination should be strictly controlled for the source water dominated by allochthonous OM, which may significantly reduce the formation of HNMs during chlorination. Moreover, given a certain nitrite level, the higher pH resulted in higher stimulation of HNM formation, yet the chlorine dose (always added in excess resulting in residual reactive chlorine), reaction time and temperature did not show obvious influence.

Terrestrial and marine perspectives on modeling organic matter degradation pathways.

PubMed

Burd, Adrian B; Frey, Serita; Cabre, Anna; Ito, Takamitsu; Levine, Naomi M; Lønborg, Christian; Long, Matthew; Mauritz, Marguerite; Thomas, R Quinn; Stephens, Brandon M; Vanwalleghem, Tom; Zeng, Ning

2016-01-01

Organic matter (OM) plays a major role in both terrestrial and oceanic biogeochemical cycles. The amount of carbon stored in these systems is far greater than that of carbon dioxide (CO2 ) in the atmosphere, and annual fluxes of CO2 from these pools to the atmosphere exceed those from fossil fuel combustion. Understanding the processes that determine the fate of detrital material is important for predicting the effects that climate change will have on feedbacks to the global carbon cycle. However, Earth System Models (ESMs) typically utilize very simple formulations of processes affecting the mineralization and storage of detrital OM. Recent changes in our view of the nature of this material and the factors controlling its transformation have yet to find their way into models. In this review, we highlight the current understanding of the role and cycling of detrital OM in terrestrial and marine systems and examine how this pool of material is represented in ESMs. We include a discussion of the different mineralization pathways available as organic matter moves from soils, through inland waters to coastal systems and ultimately into open ocean environments. We argue that there is strong commonality between aspects of OM transformation in both terrestrial and marine systems and that our respective scientific communities would benefit from closer collaboration. © 2015 John Wiley & Sons Ltd.

Estimation of atmospheric columnar organic matter (OM) mass concentration from remote sensing measurements of aerosol spectral refractive indices

NASA Astrophysics Data System (ADS)

Zhang, Ying; Li, Zhengqiang; Sun, Yele; Lv, Yang; Xie, Yisong

2018-04-01

Aerosols have adverse effects on human health and air quality, changing Earth's energy balance and lead to climate change. The components of aerosol are important because of the different spectral characteristics. Based on the low hygroscopic and high scattering properties of organic matter (OM) in fine modal atmospheric aerosols, we develop an inversion algorithm using remote sensing to obtain aerosol components including black carbon (BC), organic matter (OM), ammonium nitrate-like (AN), dust-like (DU) components and aerosol water content (AW). In the algorithm, the microphysical characteristics (i.e. volume distribution and complex refractive index) of particulates are preliminarily separated to fine and coarse modes, and then aerosol components are retrieved using bimodal parameters. We execute the algorithm using remote sensing measurements of sun-sky radiometer at AERONET site (Beijing RADI) in a period from October of 2014 to January of 2015. The results show a reasonable distribution of aerosol components and a good fit for spectral feature calculations. The mean OM mass concentration in atmospheric column is account for 14.93% of the total and 56.34% of dry and fine-mode aerosol, being a fairly good correlation (R = 0.56) with the in situ observations near the surface layer.

Characterization of organic matter of plants from lakes by thermal analysis in a N2 atmosphere

NASA Astrophysics Data System (ADS)

Guo, Fei; Wu, Fengchang; Mu, Yunsong; Hu, Yan; Zhao, Xiaoli; Meng, Wei; Giesy, John P.; Lin, Ying

2016-03-01

Organic matter (OM) has been characterized using thermal analysis in O2 atmospheres, but it is not clear if OM can be characterized using slow thermal degradation in N2 atmospheres (STDN). This article presents a new method to estimate the behavior of OM in anaerobic environment. Seventeen different plants from Tai Lake (Ch: Taihu), China were heated to 600 °C at a rate of 10 °C min-1 in a N2 atmosphere and characterized by use of differential scanning calorimetry (DSC) and thermal gravimetric analysis (TGA). DSC chromatograms were compared with 9 standard compounds. Seven peaks were observed in DSC chromatograms, 2 main peaks strongly correlated with biochemical indices, and one main peak was a transitional stage. Energy absorbed by a peak at approximately 200 °C and total organic carbon were well correlated, while energy absorbed at approximately 460 °C was negatively correlated with lignin content. Presence of peaks at approximately 350 and 420 °C varied among plant biomass sources, providing potential evidence for biomass identification. Methods of STDN reported here were rapid and accurate ways to quantitatively characterize OM, which may provide useful information for understanding anaerobic behaviors of natural organic matters.

Biogeochemical characteristics of suspended particulate matter in deep chlorophyll maximum layers in the southern East China Sea

NASA Astrophysics Data System (ADS)

Liu, Qianqian; Kandasamy, Selvaraj; Lin, Baozhi; Wang, Huawei; Chen, Chen-Tung Arthur

2018-04-01

Continental shelves and marginal seas are key sites of particulate organic matter (POM) production, remineralization and sequestration, playing an important role in the global carbon cycle. Elemental and stable isotopic compositions of organic carbon and nitrogen are thus frequently used to characterize and distinguish POM and its sources in suspended particles and surface sediments in the marginal seas. Here we investigated suspended particulate matter (SPM) collected around deep chlorophyll maximum (DCM) layers in the southern East China Sea for particulate organic carbon and nitrogen (POC and PN) contents and their isotopic compositions (δ13CPOC and δ15NPN) to understand provenance and dynamics of POM. Hydrographic parameters (temperature, salinity and turbidity) indicated that the study area was weakly influenced by freshwater derived from the Yangtze River during summer 2013. Elemental and isotopic results showed a large variation in δ13CPOC (-25.8 to -18.2 ‰) and δ15NPN (3.8 to 8.0 ‰), but a narrow molar C / N ratio (4.1-6.3) and low POC / Chl a ratio ( < 200 g g-1) in POM, and indicated that the POM in DCM layers was newly produced by phytoplankton. In addition to temperature effects, the range and distribution of δ13CPOC were controlled by variations in primary productivity and phytoplankton species composition; the former explained ˜ 70 % of the variability in δ13CPOC. However, the variation in δ15NPN was controlled by the nutrient status and δ15NNO3- in seawater, as indicated by similar spatial distribution between δ15NPN and the current pattern and water masses in the East China Sea; although interpretations of δ15NPN data should be verified with the nutrient data in future studies. Furthermore, the POM investigated was weakly influenced by the terrestrial OM supplied by the Yangtze River during summer 2013 due to the reduced sediment supply by the Yangtze River and north-eastward transport of riverine particles to the northern East China Sea. We demonstrated that the composition of POM around DCM layers in the southern East China Sea is highly dynamic and largely driven by phytoplankton abundance. Nonetheless, additional radiocarbon and biomarker data are needed to re-evaluate whether or not the POM around the DCM water depths is influenced by terrestrial OM in the river-dominated East China Sea.

Quantification of amine functional groups and their influence on OM/OC in the IMPROVE network

NASA Astrophysics Data System (ADS)

Kamruzzaman, Mohammed; Takahama, Satoshi; Dillner, Ann M.

2018-01-01

Recently, we developed a method using FT-IR spectroscopy coupled with partial least squares (PLS) regression to measure the four most abundant organic functional groups, aliphatic C-H, alcohol OH, carboxylic acid OH and carbonyl C=O, in atmospheric particulate matter. These functional groups are summed to estimate organic matter (OM) while the carbon from the functional groups is summed to estimate organic carbon (OC). With this method, OM and OM/OC can be estimated for each sample rather than relying on one assumed value to convert OC measurements to OM. This study continues the development of the FT-IR and PLS method for estimating OM and OM/OC by including the amine functional group. Amines are ubiquitous in the atmosphere and come from motor vehicle exhaust, animal husbandry, biomass burning, and vegetation among other sources. In this study, calibration standards for amines are produced by aerosolizing individual amine compounds and collecting them on PTFE filters using an IMPROVE sampler, thereby mimicking the filter media and collection geometry of ambient standards. The moles of amine functional group on each standard and a narrow range of amine-specific wavenumbers in the FT-IR spectra (wavenumber range 1 550-1 500 cm-1) are used to develop a PLS calibration model. The PLS model is validated using three methods: prediction of a set of laboratory standards not included in the model, a peak height analysis and a PLS model with a broader wavenumber range. The model is then applied to the ambient samples collected throughout 2013 from 16 IMPROVE sites in the USA. Urban sites have higher amine concentrations than most rural sites, but amine functional groups account for a lower fraction of OM at urban sites. Amine concentrations, contributions to OM and seasonality vary by site and sample. Amine has a small impact on the annual average OM/OC for urban sites, but for some rural sites including amine in the OM/OC calculations increased OM/OC by 0.1 or more.

Isolation and characterization of bacterium producing lipid from short-chain fatty acids.

PubMed

Okamura, Yoshiko; Nakai, Shota; Ohkawachi, Masahiko; Suemitsu, Masahiro; Takahashi, Hirokazu; Aki, Tsunehiro; Matsumura, Yukihiko; Tajima, Takahisa; Nakashimada, Yutaka; Matsumoto, Mitsufumi

2016-02-01

Anaerobic fermentation generates propionic acid, which inhibits microbial growth and accumulates in wastewater containing increased amounts of organic matter. We therefore isolated a propionic acid-assimilating bacterium that could produce triacylglycerol, for use in wastewater treatment. Nitratireductor sp. strain OM-1 can proliferate in medium containing propionic, acetic, butyric, and valeric acids as well as glycerol, and produces triacylglycerol when both propionic and acetic acids or glycerol are present. In composite model wastewater containing acetic acid, propionic acid and glycerol, this strain shows an even higher conversion rate, suggesting that it is suitable for wastewater treatment. Further, nitrogen depletion in medium containing an acetic-propionic acid mixture resulted in the production of the light oil 2-butenoic acid 1-methylethyl ester, but not triacylglycerol. Collectively, our data indicate that strain OM-1 has the potential to reduce accumulation of activated sludge in wastewater treatment and may contribute to the production of biodiesel. Copyright © 2015 Elsevier Ltd. All rights reserved.

Source and compositional changes of soil organic matter in an acidic forest soil - from top- to subsoil

NASA Astrophysics Data System (ADS)

Angst, Gerrit; John, Stephan; Rethemeyer, Janet; Kögel-Knabner, Ingrid; Mueller, Carsten W.

2014-05-01

Subsoils can significantly contribute to the terrestrial C pool. While processes of C turnover and storage in topsoils are generally well understood, little is known about subsoils. Our project, embedded within the DFG research group FOR 1806, aims to contribute to the knowledge about subsoil C by differentiating soil organic matter (SOM) in terms of its origin and its composition. In order to obtain a meaningful sample set we studied three soil ditches, 3.15 m in length and 2.15 m in depth, in a podzolic Cambisol under European beech (Fagus sylvatica L.) north of Hannover, Germany. In a to date unique sampling approach we took 64 soil samples in a regular vertical grid in each of the soil profiles, thus identifying possible gradients between top- and subsoil. The samples were subjected to a combined density and particle size fractionation to separate particulate organic matter (POM) from mineral compartments. We especially aimed at obtaining the combined fine silt and clay fraction which is thought to be most important in the long term stabilization of SOM. The chemical composition of the so obtained fractions and the bulk soil was revealed by C, N and 13C CPMAS NMR measurements. The source of OM in the soil was investigated by tracing the biopolymers cutin and suberin across the soil profile. Cutin occurs mainly in the cuticula of leaves while suberin mainly constitutes the endodermal cell walls of plant roots. In soils the two polymers can thus be used as proxies for above and belowground OM input respectively. To release the constituting monomers of the two biopolymers from the soil samples the latter were pretreated with organic solvents to extract free lipids. The soil residues were subsequently subjected to a base hydrolysis and the so obtained extracts were measured with GC/MS. The organic C contents of the bulk soil decrease significantly with depth in all transects from around 15 mg g-1 to 2 mg g-1. This is likely associated with the very high sand and low clay concentrations and the decreasing POM content at greater depths in the soil profiles. The highest C contents were found in the POM fractions with 400 mg g-1 and the combined fine silt and clay fractions with 6 mg g-1. Interestingly the NMR spectra display an already highly processed POM in the uppermost soil horizon as indicated by high alkyl/O-alkyl C ratios. This, together with the absence of POM in greater depths, points towards a decomposition of aboveground OM predominantly in the upper zones of the soil and a confined root input to deeper soil regions.

Visualization of soil particulate organic matter by means of X-ray CT?

NASA Astrophysics Data System (ADS)

Sleutel, Steven; Van Loo, Denis; Maenhout, Peter; Van Hoorebeke, Luc; Cnudde, Veerle; De Neve, Stefaan

2014-05-01

The role of soil structure in organic matter (OM) stabilization has been primarily investigated through physical fractionation studies operative at the scale of aggregates and smaller organo-mineral particles. By narrowing down soil structure to an arrangement of mineral and organic particles, the majority of studies did not explore the spatial organization of the soil pore network, the actual habitat of microorganisms. The pore structure of soil can have a significant impact on soil processes like OM decomposition by excluding OM from micro-organisms in small pores, by regulating the diffusion of substrates and metabolites and by regulating aeration and presence of moisture. Because of its ability to visualize the 3D architecture of soil non-destructively, X-ray Computed Tomography (CT) is becoming a widespread tool for studying soil pore network structure. However, phase determination of pore space, soil OM, soil mineral matter (MM) and water is often limited even with the latest technological and software advances, allowing high resolution and better quality imaging. Contrast agents commonly used in histology enable enhancement of X-ray attenuation of targeted structures or compounds. Here we report on the first systematic investigation of the use of such X-ray contrast agents for soil research. An evaluation procedure as well as a method to apply the agents to soil samples was developed and applied on reference soil samples. The effectiveness and selectivity of the contrast agents was evaluated for soil organic matter (SOM), MM and water. Several products were found to selectively increase the attenuation of water or SOM. The four agents with the best OM-staining capabilities (Phosphomolybdenic acid (PMA), silver nitrate, lead nitrate and lead acetate) were further tested on an OM-MM mixture. Observed differences in reactivity of the staining agents with MM components were apparent, suggesting that contrasting agents may have to be selected for the specific composition of the soil mineral matrix. Furthermore, techniques such as multiple-energy scanning and K-edge imaging, even in the future perhaps in combination with spectral resolving detectors or spectroscopic techniques can could further enhance the potential benefit from this study of X-ray CT staining agents. The high Z elements of the staining agents have unique and characteristic traits that can be detected or quantified with the abovementioned techniques and methods. We conclude that, given resolution limits and inherent presence of partial volume effects staining, X-ray CT-based localization of discrete SOM particles will be limited to a lower limit of 20-50 µm. Still, the improved 3D visualization of OM and soil pore space opens up possibilities for tailored lab experiments with measures of microbial activity, which could generate new insights in carbon cycling at small scales. In addition, we report on a lab incubation experiment in which CO2 respiration from soil cores was monitored (headspace GC analysis) and an X-ray CT approach yielded soil pore size distributions. We incubated a sandy loam soil (with application of ground grass or sawdust) in 18 small aluminium rings (Ø 1 cm, h 1 cm). Bulk density was adjusted to 1.1 or 1.3 Mg m-3 (compaction) and 6 rings were filled at a coarser Coarse Sand:Fine Sand:Silt+Clay ratio. While compaction induced a strong reduction in the cumulative C mineralization for both grass and sawdust substrates, artificial change to a coarser soil texture only reduced net C mineralization from the added sawdust. There thus appears to be a strong interaction effect between soil pore structure and substrate type on substrate decomposition. Correlation coefficients between the C mineralization rates and volumes of 7 pore size classes (from the X-ray CT data) also showed an increasing positive correlation with increasing pore size. Since any particulate organic matter initially present in the soil was removed prior to the experiment (sieving, ashing the >53µm fraction and recombining with the <53µm fraction), the added OM can be localized by means of X-ray CT. Through on-going image analysis the surrounding porosity of the added grass or sawdust particles is being quantified to further study the interaction between the soil pore structure and substrate decomposition.

Disentangling controls on mineral-stabilized soil organic matter using a slurry incubation

NASA Astrophysics Data System (ADS)

Lavallee, J. M.; Cotrufo, M. F.; Paul, E. A.; Conant, R. T.

2014-12-01

Mineral-stabilized organic matter (OM) is the largest and oldest pool of soil carbon and nitrogen. Mineral stabilization limits OM availability to soil microbes, preventing its decomposition and prolonging its turnover. Thus, understanding controls on the decomposition of mineral-stabilized OM is key to understanding soil carbon and nitrogen dynamics. The very slow turnover of mineral-stabilized OM makes it challenging to study in a typical incubation, and as a result, many potential controls (temperature, OM chemistry, and mineralogy) on its turnover remain unclear. We aimed to better understand controls on decomposition of mineral-stabilized OM by employing a slurry incubation technique, which speeds up microbial processing of OM by maximizing OM accessibility to microbes. In a slurry incubation, we expect that any OM that is not stabilized on mineral surfaces will be available for decomposition and will be converted to CO2. Using this technique, we studied the interactive effects of incubation temperature, plant material type (aboveground vs. belowground), and soil fraction (silt vs. clay) on CO2 efflux and OM stabilization. We separated silt-sized and clay-sized fractions from an agricultural soil, added aboveground or belowground plant material to each, and incubated them at 15°C, 25°C and 35°C. The added plant material was isotopically labeled (13C and 15N), which allowed us to trace it through the system and distinguish between the responses of the new (derived from the plant material) and old (derived from what was already present in the silt and clay) OM to warming. We measured CO2 efflux and 13CO2 efflux throughout the incubation. We performed one short-term harvest at day 6 and one final harvest at day 60. Initial results show higher cumulative CO2 efflux at warmer temperatures regardless of plant material type or soil fraction. A larger fraction of that CO2 came from OM that was initially present in the silt and clay, rather than from the plant material that we added, which suggests faster turnover of that "old" OM at warmer temperatures. We will present CO2 efflux data in addition to total [C] and [N] and the isotopic ratios of 13C and 15N in the silt and clay at each harvest to explain how the interactions between warming, plant material type and soil fraction affect turnover of mineral stabilized OM.

Characterisation of organic matter associated with groundwater arsenic in reducing aquifers of southwestern Taiwan.

PubMed

Al Lawati, Wafa M; Jean, Jiin-Shuh; Kulp, Thomas R; Lee, Ming-Kuo; Polya, David A; Liu, Chia-Chuan; van Dongen, Bart E

2013-11-15

Arsenic (As) in groundwaters extensively used by people across the world constitutes a serious public health threat. The importance of organic matter (OM) as an electron donor in microbially-mediated reduction of As(V) or Fe(III)-bearing As-host minerals leading to mobilisation of solid-phase arsenic is widely recognised. Notwithstanding this, there are few studies characterising OM in such aquifers and, in particular, there is a dearth of data from the classic arsenic bearing aquifers in southwestern Taiwan. Organic geochemical analyses of sediments from a known groundwater arsenic hot-spot in southwestern Taiwan revealed contributions of thermally mature and plant derived origin, consistent with OM sources in all other Asian groundwater aquifer sediments analysed to date, indicating comparable sources and routes of OM transfer. The combined results of amended As(V) reduction assays with the organic geochemical analysis revealed that the microbiological process of dissimilatory As(V) reduction is active in this aquifer, but it is not controlled by a specific source of analysed OM. These indicate that (i) part of the OM that was considered to be less bio-available could still be used as an electron donor or (ii) other electron donors, not analysed in present study, could be controlling the rate of As release. Copyright © 2012 Elsevier B.V. All rights reserved.

The effect of fire on soil properties

Treesearch

Leonard F. DeBano

1991-01-01

Fire affects nutrient cycling and the physical, chemical, and biological properties of soils occupied by western montane forests. Combustion of litter and soil organic matter (OM) increases the availability of some nutrients, although others are volatilized (for example, N, P, S). Soil OM loss also affects cation exchange capacity, organic chelation, aggregate...

Contribution of Allochthonous Carbon Subsidies to the Minho Estuary Lower Food Web

EPA Science Inventory

To study the contribution of autochthonous and allochthonous organic matter (OM) sources fuelling the lower food web in Minho River estuary (N-Portugal, Europe), we characterized the carbon (?13C) and nitrogen (?15N) stable isotope ratios of zooplankton and their potential OM sou...

Nitrogen-rich microbial products provide new organo-mineral associations for the stabilization of soil organic matter.

PubMed

Kopittke, Peter M; Hernandez-Soriano, Maria C; Dalal, Ram C; Finn, Damien; Menzies, Neal W; Hoeschen, Carmen; Mueller, Carsten W

2018-04-01

Understanding the cycling of C and N in soils is important for maintaining soil fertility while also decreasing greenhouse gas emissions, but much remains unknown about how organic matter (OM) is stabilized in soils. We used nano-scale secondary ion mass spectrometry (NanoSIMS) to investigate the changes in C and N in a Vertisol and an Alfisol incubated for 365 days with 13 C and 15 N pulse labeled lucerne (Medicago sativa L.) to discriminate new inputs of OM from the existing soil OM. We found that almost all OM within the free stable microaggregates of the soil was associated with mineral particles, emphasizing the importance of organo-mineral interactions for the stabilization of C. Of particular importance, it was also found that 15 N-rich microbial products originating from decomposition often sorbed directly to mineral surfaces not previously associated with OM. Thus, we have shown that N-rich microbial products preferentially attach to distinct areas of mineral surfaces compared to C-dominated moieties, demonstrating the ability of soils to store additional OM in newly formed organo-mineral associations on previously OM-free mineral surfaces. Furthermore, differences in 15 N enrichment were observed between the Vertisol and Alfisol presumably due to differences in mineralogy (smectite-dominated compared to kaolinite-dominated), demonstrating the importance of mineralogy in regulating the sorption of microbial products. Overall, our findings have important implications for the fundamental understanding of OM cycling in soils, including the immobilization and storage of N-rich compounds derived from microbial decomposition and subsequent N mineralization to sustain plant growth. © 2017 John Wiley & Sons Ltd.

Contribution of bacterial cells to lacustrine organic matter based on amino sugars and D-amino acids

NASA Astrophysics Data System (ADS)

Carstens, Dörte; Köllner, Krista E.; Bürgmann, Helmut; Wehrli, Bernhard; Schubert, Carsten J.

2012-07-01

Amino sugars (ASs), D-amino acids (D-AAs), and bacterial cell counts were measured in two Swiss lakes to study the contribution of bacterial cells to organic matter (OM) and the fate of ASs and bacterial amino biomarkers during OM degradation. Concentrations of individual ASs (glucosamine, galactosamine, muramic acid, and mannosamine) in the particulate and total OM pools were analyzed in water-column profiles of Lake Brienz (oligotrophic and oxic throughout the entire water column) and Lake Zug (eutrophic, stratified, and permanently anoxic below 170 m) in spring and in fall. Generally, carbon-normalized AS concentrations decreased with water depth, indicating the preferential decomposition of ASs. For Lake Brienz the relative loss of particulate ASs was higher than in Lake Zug, suggesting enhanced AS turnover in an oligotrophic environment. AS ratio changes in the water column revealed a replacement of plankton biomass with OM from heterotrophic microorganisms with increasing water depth. Similar to the ASs, highest carbon normalized D-AA concentrations were found in the upper water column with decreasing concentrations with depth and an increase close to the sediments. In Lake Zug, an increase in the percentage of D-AAs also showed the involvement of bacteria in OM degradation. Estimations of OM derived from bacterial cells using cell counts and the bacterial biomarkers muramic acid and D-AAs gave similar results. For Lake Brienz 0.2-14% of the organic carbon pool originated from bacterial cells, compared to only 0.1-5% in Lake Zug. Based on our estimates, muramic acid appeared primarily associated with bacterial biomass and not with refractory bacterial necromass. Our study underscores that bacteria are not only important drivers of OM degradation in lacustrine systems, they also represent a significant source of OM themselves, especially in oligotrophic lakes.

Multi-proxy evidence for decreased terrestrial contribution to sedimentary organic matter in coastal areas of the East China Sea during the past 100years.

PubMed

Cao, Yunyun; Xing, Lei; Zhang, Ting; Liao, Wen-Hsuan

2017-12-01

Little is known about temporal changes in sedimentary organic matter (OM) in the East China Sea (ECS) due to the lack of continuous high-resolution records. In this study, we used a multi-proxy approach to reconstruct sedimentary OM variations over the past 100years from three sediment cores collected from the coastal areas of the ECS. For the three cores, total organic carbon (TOC) normalized concentrations of phytoplankton biomarkers (brassicasterol+dinosterol+alkenones) and a marine archaea biomarker (crenarchaeol) showed gradual increases over the past 100years with a greater increase after the 1980s. These increases are attributed to eutrophic conditions caused by monsoonal variation and intensified human activities in the Yangtze River Basin (YRB) over the past century. Conversely, TOC-normalized concentrations of higher plant biomarker long-chain n-alkanes (∑(C 27 +C 29 +C 31 n-alkanes)) showed no obvious trend over the past 100years. The δ 13 C values of TOC (δ 13 C TOC ), the terrestrial and marine biomarker ratio (TMBR) index, and the branched and isoprenoid tetraether (BIT) index for the three cores record a gradual decrease in the contribution of terrestrial organic matter (TOM) since the 1960s. This decrease is likely linked to enhanced dam construction in the YRB from the 1960s onwards, leading to a reduction in TOM input to the ECS. A three end-member mixing model based on δ 13 C TOC values and the TMBR index was used to further divide sedimentary OM into three factions: marine organic matter (MOM), plant OM, and soil OM. The MOM contribution gradually increased over the past 100years, while the contribution of soil OM gradually decreased over the past 100years with a significant decline during the past 50years. This trend can also be related to intensify dam construction in the middle and upper reaches of the YR since the 1960s. Copyright © 2017 Elsevier B.V. All rights reserved.

Paris vs. Murchison: Impact of hydrothermal alteration on organic matter in CM chondrites

NASA Astrophysics Data System (ADS)

Vinogradoff, V.; Le Guillou, C.; Bernard, S.; Binet, L.; Cartigny, P.; Brearley, A. J.; Remusat, L.

2017-09-01

Unravelling the origin of organic compounds that were accreted into asteroids requires better constraining the impact of asteroidal hydrothermal alteration on their isotopic signatures, molecular structures, and spatial distribution. Here, we conducted a multi-scale/multi-technique comparative study of the organic matter (OM) from two CM chondrites (that originate from the same parent body or from identical parent bodies that accreted the same mixture of precursors) and underwent a different degree of hydrothermal alteration: Paris (a weakly altered CM chondrite - CM 2.8) and Murchison (a more altered one - CM 2.5). The Paris insoluble organic matter (IOM) shows a higher aliphatic/aromatic carbon ratio, a higher radical abundance and a lower oxygen content than the Murchison IOM. Analysis of the OM in situ shows that two texturally distinct populations of organic compounds are present within the Paris matrix: sub-micrometric individual OM particles and diffuse OM finely distributed within phyllosilicates and amorphous silicates. These results indicate that hydrothermal alteration on the CM parent body induced aromatization and oxidation of the IOM, as well as a decrease in radical and nitrogen contents. Some of these observations were also reported by studies of variably altered fragment of Tagish Lake (C2), although the hydrothermal alteration of the OM in Tagish Lake was apparently much more severe. Finally, comparison with data available in the literature suggests that the parent bodies of other chondrite petrologic groups could have accreted a mixture of organic precursors different from that accreted by the parent body of CMs.

Dynamics of dissolved organic matter in fjord ecosystems: Contributions of terrestrial dissolved organic matter in the deep layer

NASA Astrophysics Data System (ADS)

Yamashita, Youhei; McCallister, S. Leigh; Koch, Boris P.; Gonsior, Michael; Jaffé, Rudolf

2015-06-01

Annually, rivers and inland water systems deliver a significant amount of terrestrial organic matter (OM) to the adjacent coastal ocean in both particulate and dissolved forms; however, the metabolic and biogeochemical transformations of OM during its seaward transport remains one of the least understood components of the global carbon cycle. This transfer of terrestrial carbon to marine ecosystems is crucial in maintaining trophic dynamics in coastal areas and critical in global carbon cycling. Although coastal regions have been proposed as important sinks for exported terrestrial materials, most of the global carbon cycling data, have not included fjords in their budgets. Here we present distributional patterns on the quantity and quality of dissolved OM in Fiordland National Park, New Zealand. Specifically, we describe carbon dynamics under diverse environmental settings based on dissolved organic carbon (DOC) depth profiles, oxygen concentrations, optical properties (fluorescence) and stable carbon isotopes. We illustrate a distinct change in the character of DOC in deep waters compared to surface and mid-depth waters. Our results suggest that, both, microbial reworking of terrestrially derived plant detritus and subsequent desorption of DOC from its particulate counterpart (as verified in a desorption experiment) are the main sources of the humic-like enriched DOC in the deep basins of the studied fjords. While it has been suggested that short transit times and protection of OM by mineral sorption may ultimately result in significant terrestrial carbon burial and preservation in fjords, our data suggests the existence of an additional source of terrestrial OM in the form of DOC generated in deep, fjord water.

Dynamics of the transfer of terrestrial organic matter in the late Quaternary turbiditic system of the Ogooué River (Gabon)

NASA Astrophysics Data System (ADS)

Mignard, Salomé; Mulder, Thierry; Martinez, Philippe; Garlan, Thierry

2016-04-01

In many cases (Hedges et al., 1995, Xing et al., 2011) the supply of terrestrial organic matter (OM) in the oceanic environment is confined to the continental and upper slope of continental margins. However, some recent studies (Huc et al., 2001, Baudin et al., 2010, Biscara et al., 2011, Stetten et al., 2015) demonstrated that significant amounts of continental OM can be transported and deposited in deep sea sediments. This transfer is more efficient in turbiditic systems which are linked to important river deltas. In such systems, the terrigenous influx are important and the downslope sediment-laden currents can indeed transport and rapidly bury important quantities of TOM transferred from the river mouth and the shelf to the abyssal plain. The turbiditic system associated with the Ogooué River offshore Gabon has been selected to study more precisely the modalities of transfer of continental OM from the shelf to the deep offshore. The works focuses on the concentration of OM in both hemipelagites and turbidites as well as the different parameters influencing the spatial distribution and concentration. For this study 10 cores located along the system from the continental shelf to the distal lobes have been selected. The quantity of OM in the sediments as well as its origin (continental vs marine) have been measured using bulk geochemical analyses (% OC, δ13Corg). The stratigraphy of the cores was determined using a combination of planktonic foraminiferal assemblages, δ18O on benthic foraminifers and 14C dates on planktonic foraminifers, and calcium carbonate content calibrated with XRF measurements. The studied cores contain various amounts of organic carbon ranging from 0.7wt% to more than 9wt%. The highest contents are found in turbidite beds where woody detritus and well preserved fragmentary leaf debris are concentrated. In the hemipelagic facies, organic matter is composed of a mixture of marine and land derived organic matter associated with clay-size sediments. This organic sedimentation is highly sensitive to the variations of the sea level due to the alternation between glacial and interglacial times. Glacial periods are characterized by higher amounts of organic matter in hemipelagic deposits, with a higher contribution of continental material, and by the presence of frequent organic rich turbiditic beds. On the contrary, during interglacial periods very few turbiditic events are recorded and the OM in hemipelagic sediments is mainly of marine origin and in lesser quantity. When the sea-level is high, the Ogooué delta is disconnected from the canyon heads and the sediments delivered by the river are deposited on the shelf and mobilized by the strong South-North coastal drift currents. During low sea-level periods, the river discharges its sediments rich in terrestrial OM directly in the canyons heads bypassing the shelf. The low sea level also generates increased erosion of the shelf sediments containing globally high rate of reworked continental OM.

Structure and composition of Fe-OM co-precipitates that form in soil-derived solutions

NASA Astrophysics Data System (ADS)

Fritzsche, Andreas; Schröder, Christian; Wieczorek, Arkadiusz K.; Händel, Matthias; Ritschel, Thomas; Totsche, Kai U.

2015-11-01

Iron oxides represent a substantial fraction of secondary minerals and particularly affect the reactive properties of natural systems in which they formed, e.g. in soils and sediments. Yet, it is still obscure how transient conditions in the solution will affect the properties of in situ precipitated Fe oxides. Transient compositions, i.e. compositions that change with time, arise due to predominant non-equilibrium states in natural systems, e.g. between liquid and solid phases in soils. In this study, we characterize Fe-OM co-precipitates that formed in pH-neutral exfiltrates from anoxic topsoils under transient conditions. We applied soil column outflow experiments, in which Fe2+ was discharged with the effluent from anoxic soil and subsequently oxidized in the effluent due to contact with air. Our study features three novel aspects being unconsidered so far: (i) the transient composition of soil-derived solutions, (ii) that pedogenic Fe oxides instead of Fe salts serve as major source for Fe2+ in soil solution and (iii) the presence of exclusively soil-derived organic and inorganic compounds during precipitation. The experiments were carried out with two topsoil materials that differed in composition, texture and land use. Derived from Mössbauer spectroscopy, broad distributions in quadrupole splittings (0-2 mm s-1) and magnetic hyperfine fields (35-53 T) indicated the presence of low-crystalline ferrihydrite and even lower crystalline Fe phases in all Fe-OM co-precipitates. There was no unequivocal evidence for other Fe oxides, i.e. lepidocrocite and (nano)goethite. The Fe-OM co-precipitates contained inorganic (P, sulfate, silicate, Al, As) and organic compounds (proteins, polysaccharides), which were concurrently discharged from the soils. Their content in the Fe-OM co-precipitates was controlled by their respective concentration in the soil-derived solution. On a molar basis, OC and Fe were the main components in the Fe-OM co-precipitates (OC/Fe ratio = 0.5-2). The elemental composition of the Fe-OM co-precipitates was in accordance with the sequential precipitation of Fe(III)phosphates/arsenates prior to the formation of ferrihydrite. This explains decreasing Si contents in the Fe-OM co-precipitates with increasing availability of P. With respect to constant mean quadrupole splittings and slightly decreasing mean magnetic hyperfine fields, increasing contents of OC, P and Al in the Fe-OM co-precipitates did not further increase the structural disorder of the Fe polyhedra, while the crystallite interactions slightly decreased. Scanning electron microscopy and dynamic light scattering revealed the coincidental presence of variably sized aggregates and a considerable amount of Fe-OM co-precipitates, which remained dispersed in solution for months. Thus, variably composed Fe-OM co-precipitates with highly diverse aggregate sizes and comparably constant poor crystallinity can be expected after the oxidation of Fe2+ in transient, soil-derived solutions.

Nutrient composition, ruminal degradability and whole tract digestibility of whole crop maize silage from nine current varieties.

PubMed

Gruber, Leonhard; Terler, Georg; Knaus, Wilhelm

2018-04-01

Since maize silage is an important forage in cattle nutrition, it is important to know its nutritive value. Much effort is put into breeding maize, and several new varieties are introduced on the market every year. This requires periodical analyses of the nutritive value of current maize varieties for the formulation of cattle rations. The aim of this study was to examine the nutritive value of whole crop maize silage (WCMS) from nine maize varieties in 3 consecutive years. For the analysis of nutrient composition and ruminal degradability of organic matter (OM), crude protein (CP), neutral detergent fibre (aNDFom) and non-fibre carbohydrates (NFC), varieties were harvested at three harvest dates (50%, 55% and 60% dry matter content in ear). Due to capacity limitations, the digestibility of WCMS was tested only for the middle harvest date. The CP and acid detergent fibre (ADFom) content was affected (p < 0.05) while aNDFom and NFC content was not influenced by variety. With advancing maturity, CP, aNDFom and ADFom content declined while NFC content increased. Variety influenced effective ruminal degradability (ED) of nutrients, except for CP. The ED of all examined nutrients decreased as maturity advanced from first to third harvest date. Digestibility of OM, ADFom and NFC was significantly and digestibility of aNDFom was tendentially (p = 0.064) influenced by variety. Additionally, an effect of year and a harvest date × year interaction was found for almost all examined parameters. In conclusion, variety, harvest date and year influence the nutritive value of WCMS. A comparison with earlier studies shows that current varieties have a higher fibre digestibility and a slower-ripening stover compared to older varieties.

Early diagenesis of recently deposited organic matter: A 9-yr time-series study of a flood deposit

NASA Astrophysics Data System (ADS)

Tesi, T.; Langone, L.; Goñi, M. A.; Wheatcroft, R. A.; Miserocchi, S.; Bertotti, L.

2012-04-01

In Fall 2000, the Po River (Italy) experienced a 100-yr return period flood that resulted in a 1-25 cm-thick deposit in the adjacent prodelta (10-25 m water depth). In the following years, numerous post-depositional perturbations occurred including bioturbation, reworking by waves with heights exceeding 5 m, as well as periods of extremely high and low sediment supply. Cores collected in the central prodelta after the Fall 2000 flood and over the following 9 yr, allowed characterization of the event-strata in their initial state and documentation of their subsequent evolution. Sedimentological characteristics were investigated using X-radiographs and sediment texture analyses, whereas the composition of sedimentary organic matter (OM) was studied via bulk and biomarker analyses, including organic carbon (OC), total nitrogen (TN), carbon stable isotope composition (δ13C), lignin phenols, cutin-products, p-hydroxy benzenes, benzoic acids, dicarboxylic acids, and fatty acids. The 9-yr time-series analysis indicated that roughly the lower half of the original event bed was preserved in the sediment record. Conversely, the upper half of the deposit experienced significant alterations including bioturbation, addition of new material, as well as coarsening. Comparison of the recently deposited material with 9-yr old preserved strata represented a unique natural laboratory to investigate the diagenesis of sedimentary OM in a non-steady system. Bulk data indicated that OC and TN were degraded at similar rates (loss ∼17%) whereas biomarkers exhibited a broad spectrum of reactivities (loss from ∼6% to ∼60%) indicating selective preservation during early diagenesis. Given the relevance of episodic sedimentation in several margins, this study has demonstrated the utility of event-response and time-series sampling of the seabed for understanding the early diagenesis in non-steady conditions.

CHEMICAL CHARACTERIZATION OF AMBIENT PARTICULATE MATTER NEAR THE WORLD TRADE CENTER: ELEMENTAL CARBON, ORGANIC CARBON, AND MASS RECONSTRUCTION

EPA Science Inventory

Concentrations of elemental carbon (EC), organic carbon matter (OM), particulate matter less than 2.5 um (PM2.5), and reconstructed soil, trace element oxides, and sulfate are reported from four locations near the World Trade Center (WTC) complex for airborne particulate matter (...

Do Long-Term Changes in Organic Matter Inputs to Forest Soils Affect Dissolved Organic Matter Chemistry and Export?

NASA Astrophysics Data System (ADS)

Lajtha, K.; Strid, A.; Lee, B. S.

2014-12-01

Dissolved organic matter (DOM) production and transport play an important role in regulating organic matter (OM) distribution through a soil profile and ultimately, OM stabilization or export to aquatic systems. The contributions of varying OM inputs to the quality and amount of DOM as it passes through a soil profile remain relatively unknown. The Detrital Input and Removal Treatment (DIRT) site at the H. J. Andrews Experimental Forest in Oregon has undergone 17 years of litter, wood and root input manipulations and allows us to guage shifts in DOM chemistry induced by long-term changes to aboveground and belowground OM additions and exclusions. Using fluorescence and UV spectroscopy to characterize fluorescent properties, extent of decomposition, and sources of DOM in streams and soil solutions collected with lysimeters and soil extractions, we have assessed the importance of fresh OM inputs to DOM chemistry. Soil extracts from DIRT plots had a higher fluorescence index (FI) than lysimeter solutions or stream water. A high FI in surface water is generally interpreted as indicative of a high proportion of microbially-derived DOM. However, we suspect that the high FI in soil extracts is due to a higher proportion of non-aromatic DOM from fresh soil that microorganisms consume in transit through the soil profile to lysimeters or to streams. High redox index (RI) values were observed in lysimeters from the April 2014 sampling compared with the November 2013 sampling. These RI values show evidence of more reducing conditions at the end of the rainy season in the spring compared to the onset of the rainy season in the fall. Lysimeter water collected in No Input, No Litter, and No Root treatments contained high proportions of protein, suggesting the absence of carbon inputs changes activities of the microbial community. Observed variations reflect the viability of using fluorescent properties to explore the terrestrial-aquatic interface.

Estimation of soil clay and organic matter using two quantitative methods (PLSR and MARS) based on reflectance spectroscopy

NASA Astrophysics Data System (ADS)

Nawar, Said; Buddenbaum, Henning; Hill, Joachim

2014-05-01

A rapid and inexpensive soil analytical technique is needed for soil quality assessment and accurate mapping. This study investigated a method for improved estimation of soil clay (SC) and organic matter (OM) using reflectance spectroscopy. Seventy soil samples were collected from Sinai peninsula in Egypt to estimate the soil clay and organic matter relative to the soil spectra. Soil samples were scanned with an Analytical Spectral Devices (ASD) spectrometer (350-2500 nm). Three spectral formats were used in the calibration models derived from the spectra and the soil properties: (1) original reflectance spectra (OR), (2) first-derivative spectra smoothened using the Savitzky-Golay technique (FD-SG) and (3) continuum-removed reflectance (CR). Partial least-squares regression (PLSR) models using the CR of the 400-2500 nm spectral region resulted in R2 = 0.76 and 0.57, and RPD = 2.1 and 1.5 for estimating SC and OM, respectively, indicating better performance than that obtained using OR and SG. The multivariate adaptive regression splines (MARS) calibration model with the CR spectra resulted in an improved performance (R2 = 0.89 and 0.83, RPD = 3.1 and 2.4) for estimating SC and OM, respectively. The results show that the MARS models have a great potential for estimating SC and OM compared with PLSR models. The results obtained in this study have potential value in the field of soil spectroscopy because they can be applied directly to the mapping of soil properties using remote sensing imagery in arid environment conditions. Key Words: soil clay, organic matter, PLSR, MARS, reflectance spectroscopy.

Bacterial community evolutions driven by organic matter and powder activated carbon in simultaneous anammox and denitrification (SAD) process.

PubMed

Ge, Cheng-Hao; Sun, Na; Kang, Qi; Ren, Long-Fei; Ahmad, Hafiz Adeel; Ni, Shou-Qing; Wang, Zhibin

2018-03-01

A distinct shift of bacterial community driven by organic matter (OM) and powder activated carbon (PAC) was discovered in the simultaneous anammox and denitrification (SAD) process which was operated in an anti-fouling submerged anaerobic membrane bio-reactor. Based on anammox performance, optimal OM dose (50 mg/L) was advised to start up SAD process successfully. The results of qPCR and high throughput sequencing analysis indicated that OM played a key role in microbial community evolutions, impelling denitrifiers to challenge anammox's dominance. The addition of PAC not only mitigated the membrane fouling, but also stimulated the enrichment of denitrifiers, accounting for the predominant phylum changing from Planctomycetes to Proteobacteria in SAD process. Functional genes forecasts based on KEGG database and COG database showed that the expressions of full denitrification functional genes were highly promoted in R C , which demonstrated the enhanced full denitrification pathway driven by OM and PAC under low COD/N value (0.11). Copyright © 2017 Elsevier Ltd. All rights reserved.

Effect of the raw materials and mixing ratio of composted wastes on the dynamic of organic matter stabilization and nitrogen availability in composts of Sub-Saharan Africa.

PubMed

Kaboré, Théodore Wind-Tinbnoma; Houot, Sabine; Hien, Edmond; Zombré, Prosper; Hien, Victor; Masse, Dominique

2010-02-01

The effect of raw materials and their proportions in initial mixtures on organic matter (OM) stabilization and nitrogen (N) availability during pit composting in Sub-Saharan Africa was assessed using biochemical fractionation and laboratory incubations to characterize composts sampled throughout the composting process. Stabilization of OM occurred more rapidly in mixtures with slaughter-house wastes, it was progressive in mixture with household refuses while tree leaves compost remained unstable. Carbon mineralization from compost samples was positively correlated to water soluble and hemicellulose-like organic fractions. Mixtures containing large proportions of household refuses reached the highest stability and total N but available N remained weak. Slaughter-house wastes in the initial mixtures made possible to reach good OM stabilization and the largest N availability. The nature of initial mixing influenced composting parameters, OM stabilization and N availability. It is suggested mixing household refuses and slaughter-house wastes with tree leaves to reach better amending and fertilizer qualities of composts.

Control of Fossil-Fuel Particulate Black Carbon and Organic Matter, the Most Effective Method of Slowing Global Warming

NASA Astrophysics Data System (ADS)

Jacobson, M. Z.

2001-12-01

Under the 1997 Kyoto Protocol, no control of black carbon (BC) was considered. Here, it is found, through simulations in which seven new particles feedbacks to climate are identified, that any emission reduction of fossil-fuel (f.f.) particulate BC plus associated organic matter (OM) will slow global warming more than will any emission reduction of CO2 or CH4 for a definite time period. When all f.f. BC+OM and anthropogenic CO2 and CH4 emissions are eliminated together, that period is 20-90 years. It is also found that historical net global warming can be attributed roughly to greenhouse-gas plus f.f. BC+OM warming minus anthropogenic sulfate cooling. Eliminating all f.f. BC+OM could eliminate more than 40 percent of such net warming within three years if no other changes occurred. Reducing CO2 emissions by a third would have the same effect, but after 50-200 years. Finally, diesel cars warm climate more than do equivalent gasoline cars; thus, fuel- and carbon-tax laws that favor diesel promote global warming.

Pesticide adsorption in relation to soil properties and soil type distribution in regional scale.

PubMed

Kodešová, Radka; Kočárek, Martin; Kodeš, Vít; Drábek, Ondřej; Kozák, Josef; Hejtmánková, Kateřina

2011-02-15

Study was focused on the evaluation of pesticide adsorption in soils, as one of the parameters, which are necessary to know when assessing possible groundwater contamination caused by pesticides commonly used in agriculture. Batch sorption tests were performed for 11 selected pesticides and 13 representative soils. The Freundlich equations were used to describe adsorption isotherms. Multiple-linear regressions were used to predict the Freundlich adsorption coefficients from measured soil properties. Resulting functions and a soil map of the Czech Republic were used to generate maps of the coefficient distribution. The multiple linear regressions showed that the K(F) coefficient depended on: (a) combination of OM (organic matter content), pH(KCl) and CEC (cation exchange capacity), or OM, SCS (sorption complex saturation) and salinity (terbuthylazine), (b) combination of OM and pH(KCl), or OM, SCS and salinity (prometryne), (c) combination of OM and pH(KCl), or OM and ρ(z) (metribuzin), (d) combination of OM, CEC and clay content, or clay content, CEC and salinity (hexazinone), (e) combination of OM and pH(KCl), or OM and SCS (metolachlor), (f) OM or combination of OM and CaCO(3) (chlorotoluron), (g) OM (azoxystrobin), (h) combination of OM and pH(KCl) (trifluralin), (i) combination of OM and clay content (fipronil), (j) combination of OM and pH(KCl), or OM, pH(KCl) and CaCO(3) (thiacloprid), (k) combination of OM, pH(KCl) and CEC, or sand content, pH(KCl) and salinity (chlormequat chloride). Copyright © 2010 Elsevier B.V. All rights reserved.

Hydrographic controls on marine organic matter fate and microbial diversity in the western Irish Sea

NASA Astrophysics Data System (ADS)

O'Reilly, Shane; Szpak, Michal; Monteys, Xavier; Flanagan, Paul; Allen, Christopher; Kelleher, Brian

2014-05-01

Cycling of organic matter (OM) is the key biological process in the marine environment1 and knowledge of the sources and the reactivity of OM, in addition to factors controlling its distribution in estuarine, coastal and shelf sediments are of key importance for understanding global biogeochemical cycles2. With recent advances in cultivation-independent molecular approaches to microbial ecology, the key role of prokaryotes in global biogeochemical cycling in marine ecosystems has been emphasised3,4. However, spatial studies combining the distribution and fate of OM with microbial community abundance and diversity remain rare. Here, a combined spatial lipid biomarker and 16S rRNA tagged pyrosequencing study was conducted in surface sediments and particulate matter across hydrographically distinct zones associated with the seasonal western Irish Sea gyre. The aim was to assess the spatial variation of, and factors controlling, marine organic cycling and sedimentary microbial communities across these distinct zones. The distribution of phospholipid fatty acids, source-specific sterols, wax esters and C25 highly branched isoprenoids indicate that diatoms, dinoflagellates and green algae were the major contributors of marine organic matter, while the distribution of cholesterol, wax esters and C20 and C22 polyunsaturated fatty acids have highlighted the importance of copepod grazing for mineralizing organic matter in the water column5. This marine OM production and mineralisation was greatest in well-mixed waters compared to offshore stratified waters. Lipid analysis and 16S rRNA PCR-DGGE profiling also suggests that sedimentary bacterial abundance increases while community diversity decreases in offshore stratified waters. The major bacterial classes are the Deltaproteobacteria, Clostridia, Flavobacteriia, Gammaproteobactera and Bacteroiidia. At the family/genus level most groups appear to be associated with organoheterotrophic processing of sedimentary OM, ranging from degradation of complex organic matter (e.g. Tepidibacter sp.) to sulfur-dependent utilisation of simple organic molecules (e.g. Desulfobulbaceae and Desulfuromonadaceae. 1. Hedges and Keil (1995) Mar Chem 49, 81-115. 2. Baldock et al., (2004) Mar Chem 92, 39-64. 3. Deming and Baross, (1993) Plenum Press, NY. 4. 4. Gooday, (2002) J Oceanogr 58, 305-332. 5. O'Reilly et al., (2013) Estuar, Coast & Shelf Sci. http://dx.doi.org/10.1016/j.ecss.2013.11.002

Submicron structures provide preferential spots for carbon and nitrogen sequestration in soils

PubMed Central

Vogel, Cordula; Mueller, Carsten W.; Höschen, Carmen; Buegger, Franz; Heister, Katja; Schulz, Stefanie; Schloter, Michael; Kögel-Knabner, Ingrid

2014-01-01

The sequestration of carbon and nitrogen by clay-sized particles in soils is well established, and clay content or mineral surface area has been used to estimate the sequestration potential of soils. Here, via incubation of a sieved (<2 mm) topsoil with labelled litter, we find that only some of the clay-sized surfaces bind organic matter (OM). Surprisingly, <19% of the visible mineral areas show an OM attachment. OM is preferentially associated with organo-mineral clusters with rough surfaces. By combining nano-scale secondary ion mass spectrometry and isotopic tracing, we distinguish between new labelled and pre-existing OM and show that new OM is preferentially attached to already present organo-mineral clusters. These results, which provide evidence that only a limited proportion of the clay-sized surfaces contribute to OM sequestration, revolutionize our view of carbon sequestration in soils and the widely used carbon saturation estimates. PMID:24399306

Stabilization of organic matter in soils: role of amorphous mineral phases

NASA Astrophysics Data System (ADS)

Zewde Tamrat, Wuhib; Rose, Jérôme; Levard, Clément; Chaurand, Perrine; Basile-Doelsch, Isabelle

2016-04-01

Soil organic matter (SOM) globally contributes the largest portion of continental carbon stock. One major issue concerning this large C pool includes its instability by mineralization and erosion due to land use. The main hypothesis of this work is that physicochemical stabilization of SOM is mainly driven by interactions of organic compounds, not with mineral surfaces as classically considered, but with amorphous polymers continuously formed by the alteration of soil minerals(1-3). Our objective is to understand how nano-organomineral complexes (nCOMx) are structured at the nanoscale, assess mechanisms of their formation, and quantify the effects of their occurrence on SOM turnovers. Due to inherent high complexity of natural samples, our methodology is based on the formation of nCOMx from both synthetic systems and natural mineral-weathered components. For the mineral component, biotite (from Bancroft, Canada) was selected. For the organic component, 3,4-Dihydroxy-L-phenylalanine, an amino acid with hydroxyl (pKa=9.95), carboxyl (pKa=2,58), amino (pKa=9,24) and an aromatic functions was chosen. The methodology aimed at developing conditions that generate biotite dissolution and nCOMx precipitation. The second step of the experiment consisted of the precipitation of nCOMx by slowly increasing pH over 3 to 12 hours of hydrolysis. Three final pH conditions were tested (4.2, 5 and 7) with Metal/Carbon ratios of 0.01, 0.1, 1, 10 and 'No Carbon'. The first results of dissolution rates and congruency, AFM imaging, ICPMS, HR-TEM and XRD as well as XAS characterizations (transmission and florescence mode at the Fe K-edge) of nCOMx will be presented. Experiments and analysis techniques were designed to study these synthetic phases with regard to Si, Al, Fe and OM proportions to increase the OM proportion (as in natural soil phases) and also increase the stability of the OM phase (as in increased residence time of OM in the soil). We will focus particularly on the Fe state probed by XAS as a proxy of nCOMx polymerization state. Results showed the Fe atomic structure within the nCOMx was strongly affected by the presence of carbon and the final pH state. Higher pH allowed Fe to polymerize even at a relatively higher carbon content. The increase in concentration of OM led to a decrease in the polymerisation level of Fe amorphous polymers. High carbon composition (M:C=0.1) totally hindered development of Fe-Fe polymers. Whereas, in relatively lower carbon concentrations (M:C=1) iron polymers were exhibited for only highest pH values of 7. For an even lower concentration (M:C=10) iron polymers started to form at lower pH values of 5 and also higher. These suggest the strong dependence of soil OM complexation to inorganic amorphous polymers on pH state and relative availability of these counter parts; and thus giving a better understanding of protection of the carbon from various forms of mineralization. 1-Basile-Doelsch, I., 2015 Environmental Science & Technology, 49(7). 2-Keiluweit, M. et al., 2015. Nature Clim. Change, 5(6). 3-Kleber, M. et al., 2015. In: Donald, L.S. (Ed.), Advances in Agronomy. Key words : soil organic matter (OM), organo-mineral interactions, amorphous minerals, pH

Combustion inputs into a terrestrial archive over 265 years as evidenced by BPCA molecular markers

NASA Astrophysics Data System (ADS)

Hanke, Ulrich M.; Eglinton, Timothy I.; Wiedemeier, Daniel B.; Schmidt, Michael W. I.

2015-04-01

Pyrogenic organic matter (PyOM) such as char and soot is produced during the incomplete combustion of biomass and fossil fuel. It is composed of condensed aromatic structures and can resist degradation processes, maybe over long periods of time. Land-use changes, industrial activity and its transport by wind and water affect the fluxes of PyOM from the source to its sedimentary archive. Investigating environmental PyOM with the molecular marker benzene polycarboxylic acid (BPCA) method provides various information about quantity, quality (BPCA distribution pattern) and about its isotopic composition (13C and 14C). Assessing PyOM quality can indicate whether it is mostly combustion condensate (soot) or combustion residue (charcoal) and potentially allow source apportionment. Our study area is the Pettaquamscutt River catchment area (35 km2), Rhode Island, U.S.A. It is located down-wind of industrial areas recording deposition of long-distance atmospheric transport as well as local catchment inputs, both from natural and anthropogenic sources. We investigated 50 samples of a sediment record over a time span of 265 years (1733-1998 AD). Previous investigations provided information on the age of deposition, the content of polycyclic aromatic hydrocarbons (PAH) as well as of the radiocarbon contents of total organic carbon (TOC) and PAH (Lima, 2004). We used the BPCA molecular marker method to quantify and characterize PyOM in the same record. First results show that quantity and quality of PyOM change over 265 years. Our investigation aims at understanding how different sources of PyOM are reflected in terrestrial archives by comparing the results of BPCA with radiocarbon-dated TOC and PAH records. Among other aspects, the PAH record reflects the Great Depression and the 1970s oil embargo in North America. We interpret the BPCA distribution patterns regarding the simultaneous shift of dominant fuels including wood, coal, petroleum and gas. Future work will include compound-specific radiocarbon analysis of BPCA molecular markers to improve our understanding of the sources and residence time of PyOM. References Lima, A.L.C., 2004. Molecular and Isotopic Records of Combustion Inputs to the Environment Over the Last 250 Years, doctoral dissertation, Massachusetts Institute of Technology/Woods Hole Oceanographic Institution (MIT/WHOI).

Microbial control over carbon cycling in soil

PubMed Central

Schimel, Joshua P.; Schaeffer, Sean M.

2012-01-01

A major thrust of terrestrial microbial ecology is focused on understanding when and how the composition of the microbial community affects the functioning of biogeochemical processes at the ecosystem scale (meters-to-kilometers and days-to-years). While research has demonstrated these linkages for physiologically and phylogenetically “narrow” processes such as trace gas emissions and nitrification, there is less conclusive evidence that microbial community composition influences the “broad” processes of decomposition and organic matter (OM) turnover in soil. In this paper, we consider how soil microbial community structure influences C cycling. We consider the phylogenetic level at which microbes form meaningful guilds, based on overall life history strategies, and suggest that these are associated with deep evolutionary divergences, while much of the species-level diversity probably reflects functional redundancy. We then consider under what conditions it is possible for differences among microbes to affect process dynamics, and argue that while microbial community structure may be important in the rate of OM breakdown in the rhizosphere and in detritus, it is likely not important in the mineral soil. In mineral soil, physical access to occluded or sorbed substrates is the rate-limiting process. Microbial community influences on OM turnover in mineral soils are based on how organisms allocate the C they take up – not only do the fates of the molecules differ, but they can affect the soil system differently as well. For example, extracellular enzymes and extracellular polysaccharides can be key controls on soil structure and function. How microbes allocate C may also be particularly important for understanding the long-term fate of C in soil – is it sequestered or not? PMID:23055998

Petroleum surface oil seeps from Palaeoproterozoic petrified giant oilfield

NASA Astrophysics Data System (ADS)

Melezhik, V.; Fallick, A.; Filippov, M.; Lepland, A.; Rychanchik, D.; Deines, Yu.; Medvedev, P.; Romashkin, A.; Strauss, H.

2009-04-01

Evidence of petroleum generation and migration has been previously reported from rocks dating as early as 3.25 Ga. Micron-size carbonaceous streaks and bitumen micronodules were found in abundance in Archaean rocks across the Pilbara craton in Australia suggesting pervasive petroleum generation and migration. However, none of the Archaean petroleum deposits has been reported to be preserved in quantity due to destructive effects of deformation and thermal obliteration during metamorphism. During the Palaeoproterozoic, unprecedented accumulation of Corg-rich rocks worldwide, known as the 2.0 Ga Shunga Event, occurred during the early stage of progressive oxidation of terrestrial environments, and in the aftermath of the Lomagundi-Jatuli isotopic event, which based on the magnitude and duration of positive d13C was the greatest perturbation of the global carbon cycle in Earth history. C. 2.0 Ga Zaonezhskaya Formation (ZF) rocks from the Onega Basin in Russian Fennoscandia contain evidence for substantial accumulation and preservation of organic matter (up to 75 wt.-% total organic carbon) with an estimated original petroleum potential comparable to a modern supergiant oilfield. The basin contains a uniquely preserved petrified oilfield including evidence of oil traps and oil migration pathways. Here, we report the discovery of the surface expression of a migration pathway, along which petroleum was flowing from the sub-surface. This surface oil seep, the first occurrence ever reported from the Palaeoproterozoic, appears as originally bitumen clasts redeposited in Palaeoproterozoic lacustrine turbidites of the Kondopozhskaya Formation. The d13Corg of clastic pyrobitumen ranges between -35.4 and -36.0 per mill (n = 14) which is within the range of interbed- and vein-trapped fossil oil (-46 and -24 per mill), suggesting similar source. Biogenic organic matter, whose isotopic composition was modified during thermal maturation, is the likely source for the migrated hydrocarbon. Oil seeps, being a very common attribute of almost every major petroleum-producing province in the world, highlight the scale of oil generation and migration in the Onega Basin. The large d13C variability in interbed-trapped pyrobitumen and in organic matter (OM) of the ZF can be entirely explained neither by isotopic fractionation during petroleum generation nor by metamorphic processes, thus it might reflect a primary feature. The source material could have had a wide range of compositions that could have reacted in various ways to the subsequent maturation and alteration. We tentatively suggest that small-scale pyrobitumen accumulations may reflect the initial isotope heterogeneity of the source. In contrast, the seeps d13C are homogeneous, thus perhaps reflecting a large-scale migration and accumulation of composite oil produced by mixing and homogenisation of various oil sources. However, the low H/C of OM and pyrobitumens suggests that the source rock's various components with apparent diversity of original d13C have been over-matured. Although these values are compatible with being the source of the seeps, robust source-reservoir correlation cannot be made. In the evolutionary context, it is significant that the 2.0 Ga OM-rich rocks and generation of supergiant oilfields occurred in the aftermath of the Lomagundi-Jatuli isotopic event, and during the course of the early stage of oxidation of the terrestrial atmosphere. Whether enhanced biomass or change in the preservation potential caused such unprecedented OM accumulation and large-scale oil generation remains to be investigated.

Sediment and organic carbon transport in Cap de Creus canyon, Gulf of Lions (France)

NASA Astrophysics Data System (ADS)

Tesi, T.; Puig, P.; Palanques, A.; Goni, M. A.; Miserocchi, S.; Langone, L.

2009-04-01

The off-shelf transport of particles in continental margins is responsible for much of the flux of organic matter (OM)and nutrients towards deep-sea ecosystems, playing a key role in the global oceanic biogeochemical cycles. Off-shelf sediment transport mechanism have been well described for many continental margins being triggered by a series of physical forcings such as tides, storms, internal waves, floods, earthquakes, as well as the combination of some of these processes, while topographic structures such as submarine canyons act as preferential sedimentary conduits toward deep ocean. However, the composition of the material supplied to the deep ocean during these events is still poorly understood since most studies have only investigated the magnitude of the down-slope fluxes or limited their analysis to the major bulk components. A special opportunity to characterize the biogeochemical composition of the off-shelf export in the Gulf of Lions (GoL) margin was provided during the winter 2004-2005, when an exceptional dense water cascading event occurred. Dense water overflowing off the shelf in the GoL has been recently recognized as one of the main process affecting particulate shelf-to-slope exchange in northwestern Mediterranean Sea. During the 2004-2005 cascading event, moored instruments were deployed at the Cap de Creus (CdC) canyon head to monitor the physical parameters and to characterize the temporal variability of the exported material. Post-cascading sediment cores were collected along the sediment dispersal system to trace the sediment transport pathway. In this study we developed a source tracing method using elemental compositions, alkaline CuO reaction products (lignin, cutin, lipids, hydroxy benzenes, proteins, lipids, and polysaccharides products), biogenic silica, carbon stable isotope composition, radiocarbon measurements, and grain size as a fingerprint for each sample. The aforementioned analyses were carried out on both sediment trap and sediment samples to obtain a homogeneous data matrix. The dynamic mixture of OM sources and shelf sediments was then analyzed using multivariate statistics. A quantitative mixing model was used to assess the relative contribution of allochthonous and autochthonous OM and to identify the relationship between sediment export from the shelf and down-slope particulate fluxes (sediment provenance).

Interactive effects of elevated CO2 and nitrogen deposition on fatty acid molecular and isotope composition of above- and belowground tree biomass and forest soil fractions.

PubMed

Griepentrog, Marco; Eglinton, Timothy I; Hagedorn, Frank; Schmidt, Michael W I; Wiesenberg, Guido L B

2015-01-01

Atmospheric carbon dioxide (CO2) and reactive nitrogen (N) concentrations have been increasing due to human activities and impact the global carbon (C) cycle by affecting plant photosynthesis and decomposition processes in soil. Large amounts of C are stored in plants and soils, but the mechanisms behind the stabilization of plant- and microbial-derived organic matter (OM) in soils are still under debate and it is not clear how N deposition affects soil OM dynamics. Here, we studied the effects of 4 years of elevated (13C-depleted) CO2 and N deposition in forest ecosystems established in open-top chambers on composition and turnover of fatty acids (FAs) in plants and soils. FAs served as biomarkers for plant- and microbial-derived OM in soil density fractions. We analyzed above- and belowground plant biomass of beech and spruce trees as well as soil density fractions for the total organic C and FA molecular and isotope (δ13C) composition. FAs did not accumulate relative to total organic C in fine mineral fractions, showing that FAs are not effectively stabilized by association with soil minerals. The δ13C values of FAs in plant biomass increased under high N deposition. However, the N effect was only apparent under elevated CO2 suggesting a N limitation of the system. In soil fractions, only isotope compositions of short-chain FAs (C16+18) were affected. Fractions of 'new' (experimental-derived) FAs were calculated using isotope depletion in elevated CO2 plots and decreased from free light to fine mineral fractions. 'New' FAs were higher in short-chain compared to long-chain FAs (C20-30), indicating a faster turnover of short-chain compared to long-chain FAs. Increased N deposition did not significantly affect the quantity of 'new' FAs in soil fractions, but showed a tendency of increased amounts of 'old' (pre-experimental) C suggesting that decomposition of 'old' C is retarded by high N inputs. © 2014 John Wiley & Sons Ltd.

Characterization and Phenanthrene Sorption of Natural and Pyrogenic Organic Matter Fractions.

PubMed

Jin, Jie; Sun, Ke; Wang, Ziying; Yang, Yan; Han, Lanfang; Xing, Baoshan

2017-03-07

Pyrogenic humic acid (HA) is released into the environment during the large-scale application of biochar. However, the biogeochemistry of pyrogenic organic matter (PyOM) fractions and their sorption of hydrophobic organic compounds (HOCs) are poorly understood in comparison with natural organic matter (NOM) fractions. HA and humin (HM) fractions isolated from soils and the oxidized biochars were characterized. Sorption of phenanthrene (PHE) by these fractions was also examined. The characterization results demonstrate that pyrogenic HAs are different from natural HAs, with the former having lower atomic H/C ratios, more abundant aromatic C, and higher concentrations of surface carboxylic groups. Compared with the fresh biochars, the K oc of PHE on their oxidized biochars, pyrogenic HA, and HM fractions were undiminished, which is encouraging for the use of biochar in soil remediation. The PyOM fractions exhibited stronger nonlinear sorption than the NOM fractions. In addition, the PyOM fractions had higher sorption capacity than the NOM fractions due to their low polar C content and high aryl C content. The results obtained from this work will shed new light on the impact of the addition of biochar on the biogeochemistry of soil organic matter and on the fate of HOCs in biochar-amended soil.

Source of the Organic Matter and Land-Marine Interaction Phases in Great Rann of Kachch Basin, India

NASA Astrophysics Data System (ADS)

Khonde, N. N.; Bhushan, R.; Agnihotri, R.; Maurya, D. M.; Chamyal, L. S.

2017-12-01

Using δ13C and C/N ratio of sedimentary organic matter (OM) in 14C AMS dated sediment core from central Great Rann of Kachchh (GRK) basin, we track sediment dispositional history since 18 ka BP. Temporal changes in the δ13C and C/N ratios were inferred in terms of OM source, which could be function of river discharge, relative sea level changes, and also due to land-cover changes in the catchment area. The down core variations in TOC vs TC doesn't show significant correlation suggesting diverse origin of the OM in GRK sediments. Between 18-13 ka BP, pulses of high C/N ratio (18-34) and depleted δ13C (average -23‰; with respect to typical marine -21‰) values hint terrestrially derived OM in rather overall marine environment. High terrestrial OM input from riverine inputs in post glacial period could be relatable to intense monsoonal conditions. Later to this phase, between 14-10 ka BP, C/N ratios show large fluctuations indicating rapidly fluctuating environment, albeit δ13C remains relatively stable at -21‰ typical of marine OM. A significant positive incursion in C/N ratio (45-60) is seen during early-mid Holocene time ( 10-6 ka BP) with and highly depleted δ13C ( -25‰) values indicating enhanced terrestrial OM input. This could be owing to increased riverine fluxes to the basin under intensified monsoonal climate. Between 6-2.5 ka BP during mid-Holocene, C/N ratios shows declining trend with enriched δ13C values, suggesting presence of marine OM source at the core-site. This overlaps with the weaker monsoonal conditions prevailing in the northwest India. Lake records from Rajasthan also support this contention. After 2.5 ka BP, C/N ratios indicate marine OM values, whereas δ13C fluctuates from marine to terrestrial values indicating `mixed-source' of the OM during this period, most likely due to unstable land-marine conditions and large-scale reworking of sediments.

Interactive effects of MnO2, organic matter and pH on abiotic formation of N2O from hydroxylamine in artificial soil mixtures.

PubMed

Liu, Shurong; Berns, Anne E; Vereecken, Harry; Wu, Di; Brüggemann, Nicolas

2017-02-01

Abiotic conversion of the reactive nitrification intermediate hydroxylamine (NH 2 OH) to nitrous oxide (N 2 O) is a possible mechanism of N 2 O formation during nitrification. Previous research has demonstrated that manganese dioxide (MnO 2 ) and organic matter (OM) content of soil as well as soil pH are important control variables of N 2 O formation in the soil. But until now, their combined effect on abiotic N 2 O formation from NH 2 OH has not been quantified. Here, we present results from a full-factorial experiment with artificial soil mixtures at five different levels of pH, MnO 2 and OM, respectively, and quantified the interactive effects of the three variables on the NH 2 OH-to-N 2 O conversion ratio (R NH2OH-to-N2O ). Furthermore, the effect of OM quality on R NH2OH-to-N2O was determined by the addition of four different organic materials with different C/N ratios to the artificial soil mixtures. The experiments revealed a strong interactive effect of soil pH, MnO 2 and OM on R NH2OH-to-N2O . In general, increasing MnO 2 and decreasing pH increased R NH2OH-to-N2O , while increasing OM content was associated with a decrease in R NH2OH-to-N2O . Organic matter quality also affected R NH2OH-to-N2O . However, this effect was not a function of C/N ratio, but was rather related to differences in the dominating functional groups between the different organic materials.

Interactive effects of MnO2, organic matter and pH on abiotic formation of N2O from hydroxylamine in artificial soil mixtures

NASA Astrophysics Data System (ADS)

Liu, Shurong; Berns, Anne E.; Vereecken, Harry; Wu, Di; Brüggemann, Nicolas

2017-02-01

Abiotic conversion of the reactive nitrification intermediate hydroxylamine (NH2OH) to nitrous oxide (N2O) is a possible mechanism of N2O formation during nitrification. Previous research has demonstrated that manganese dioxide (MnO2) and organic matter (OM) content of soil as well as soil pH are important control variables of N2O formation in the soil. But until now, their combined effect on abiotic N2O formation from NH2OH has not been quantified. Here, we present results from a full-factorial experiment with artificial soil mixtures at five different levels of pH, MnO2 and OM, respectively, and quantified the interactive effects of the three variables on the NH2OH-to-N2O conversion ratio (RNH2OH-to-N2O). Furthermore, the effect of OM quality on RNH2OH-to-N2O was determined by the addition of four different organic materials with different C/N ratios to the artificial soil mixtures. The experiments revealed a strong interactive effect of soil pH, MnO2 and OM on RNH2OH-to-N2O. In general, increasing MnO2 and decreasing pH increased RNH2OH-to-N2O, while increasing OM content was associated with a decrease in RNH2OH-to-N2O. Organic matter quality also affected RNH2OH-to-N2O. However, this effect was not a function of C/N ratio, but was rather related to differences in the dominating functional groups between the different organic materials.

Oribatid mites in soil toxicity testing-the use of Oppia nitens (C.L. Koch) as a new test species.

PubMed

Princz, Juliska I; Behan-Pelletier, Valerie M; Scroggins, Richard P; Siciliano, Steven D

2010-04-01

Few soil invertebrate species are available for the toxic assessment of soils from boreal or other northern ecozones, yet these soils cover the majority of Canada's landmass as well as significant portions of Eurasia. Oppia nitens (C.L. Koch) is an herbivorous and fungivorous oribatid mite found in soil throughout Holarctic regions, including Canada. Soil tests using O. nitens were performed using 15 different forest soil types and horizons to investigate test variability in adult survival and reproduction. Adult survival (86.1 +/- 1.1%) was consistent across soil types, with a coefficient of variation (CV) of 15%. However, reproduction varied significantly, ranging from 2.9 (+/-1.1) to 86.2 (+/-11.7) individuals, with a corresponding CV of 118 and 30%, respectively. Of the soil factors assessed (NH(3), NO(3), pH, phosphorus [P], organic matter content (OM), carbon:nitrogen (C:N), sand, silt, clay, and sodium adsorption ratio), soil organic matter (OM) explained 68% of the variation observed for reproduction. Increasing the OM using Sphagnum sp. peat moss resulted in optimal reproduction at 7% OM (8% peat content) with the lowest variability (CV of 20%). When assessing the toxicity of a reference chemical, boric acid, the effect of peat amendment reduced lethality to adults with no observable difference on reproduction. The use an age-synchronized culture reduced the test variability for reproduction relative to the use of unsynchronized cultures. Oppia nitens is a good candidate species for a standardized test design, with adult survival easily assessed in a relatively simple design. A long-term reproduction test with O. nitens will require the use of a synchronized population and, on occasion, OM amendment when testing soils with low organic matter content. (c) 2009 SETAC.

Assessing the biodegradability of terrestrially-derived organic matter in Scottish sea loch sediments

NASA Astrophysics Data System (ADS)

Loh, P. S.; Miller, A. E. J.; Reeves, A. D.; Harvey, S. M.; Overnell, J.

2008-05-01

Lignin oxidation products, oxygen uptake rates, molar organic carbon to nitrogen (OC/N) ratio (from bulk elemental analysis) and Rp values (from loss on ignition experiments, the ratio of the refractory to total organic matter, OM) were determined for sediments along transects of Loch Creran and Loch Etive. Lignin data indicated the importance of riverine inputs contributing to land-derived carbon in the lochs as total lignin (Λ, mg/100 mg organic carbon, OC) decreased from 0.69 to 0.45 and 0.70 to 0.29 from the head to outside of Loch Creran and Loch Etive, respectively. In addition, significant correlations of lignin content against total OM and OC (p<0.05) also suggested a distinct contribution of terrestrial OM to carbon pools in the lochs. The general trend of decreasing oxygen uptake rates from the head (20.8 mmole m-2 day-1) to mouth (9.4 mmole m-2 day-1) of Loch Creran indicates decomposition of OM. Biodegradability of the sedimentary OM was also characterized by the increase of Rp values from the head to mouth of the lochs: 0.40 to 0.80 in Loch Etive and 0.43 to 0.63 in Loch Creran. Furthermore, the molar OC/N ratio decreased from 11.2 to 6.4 in Loch Creran, and from 17.5 to 8.2 in Loch Etive. Derived rate constants for OM degradation were found to decrease from LC0 to LC1, and increase from RE5 to RE6. This work demonstrates that oxygen uptake rates, Rp values and molar OC/N ratio are able to serve as useful proxies to indicate the biodegradability of sedimentary OM.

Effects of calcium oxide treatment at varying moisture concentrations on the chemical composition, in situ degradability, in vitro digestibility and gas production kinetics of anaerobically stored corn stover.

PubMed

Shi, H T; Cao, Z J; Wang, Y J; Li, S L; Yang, H J; Bi, Y L; Doane, P H

2016-08-01

The objective of this study was to determine the optimum conditions for calcium oxide (CaO) treatment of anaerobically stored corn stover by in situ and in vitro methods. Four ruminally cannulated, non-lactating, non-pregnant Holstein cows were used to determine the in situ effective degradabilities of dry matter (ISDMD), organic matter (ISOMD), neutral detergent fibre (ISNDFD), in vitro organic matter disappearance (IVOMD) and gas production in 72 h (GP72h ) of corn stover. A completely randomized design involving a 3 × 3 factorial arrangement was adopted. Ground corn stover was treated with different levels of CaO (3%, 5% and 7% of dry stover) at varying moisture contents (40%, 50% and 60%) and stored under anaerobic conditions for 15 days before analysis. Compared with untreated corn stover, the CaO-treated stover had increased ash and calcium (Ca) contents but decreased aNDF and OM contents. The moisture content, CaO level and their interaction affected (p < 0.01) the content of aNDF, ash and OM, and the ratio of aNDF/OM. The greatest ISDMD, ISOMD and ISNDFD were observed when stover was treated with 7% CaO and 60% moisture, while no differences (p > 0.01) in these in situ degradability parameters were observed between the stover treated with 5% CaO at 60% moisture content and those treated with 7% CaO at 60% moisture content. Corn stover treated with 5% CaO at 50% moisture had the maximum IVOMD and GP72 h among the treatments, and there was no difference (p > 0.01) between 50% and 60% moisture. Results from this study suggested that 5% CaO applied at 60% moisture could be an effective and economical treatment combination. Journal of Animal Physiology and Animal Nutrition © 2015 Blackwell Verlag GmbH.

Properties of dissolved and total organic matter in throughfall, stemflow and forest floor leachate of central European forests

NASA Astrophysics Data System (ADS)

Bischoff, S.; Schwarz, M. T.; Siemens, J.; Thieme, L.; Wilcke, W.; Michalzik, B.

2015-05-01

We present the first investigation of the composition of dissolved organic matter (DOM) compared to total organic matter (TOM, consisting of DOM, < 0.45 μm and particulate organic matter 0.45 μm < POM < 500 μm) in throughfall, stemflow and forest floor leachate of common beech (Fagus sylvatica L.) and Norway spruce (Picea abies (L.) H. Karst.) forests using solid-state 13C nuclear magnetic resonance (NMR) spectroscopy. We hypothesized that the composition and properties of organic matter (OM) in forest ecosystem water samples differ between DOM and TOM and between the two tree species. The 13C NMR results, derived from 21 samples, point to pronounced differences in the composition of DOM and TOM in throughfall solution at the beech sites, with TOM exhibiting higher relative intensities for the alkyl C region, which represents aliphatic C from less decomposed organic material compared to DOM. Furthermore, TOM shows lower intensities for lignin-derived and aromatic C of the aryl C region resulting in lower aromaticity indices and a diminished degree of humification. Across the ecosystem compartments, differences in the structural composition of DOM and TOM under beech lessened in the following order: throughfall > stemflow ≈ forest floor leachate. In contrast to the broadleaved sites, differences between DOM and TOM in throughfall solution under spruce were less pronounced and spectra were, overall, dominated by the alkyl C region, representing aliphatic C. Explanations of the reported results might be substantiated in differences in tree species-specific structural effects, leaching characteristics or differences in the microbial community of the tree species' phyllosphere and cortisphere. However, the fact that throughfall DOM under beech showed the highest intensities of recalcitrant aromatic and phenolic C among all samples analysed likely points to a high allelopathic potential of beech trees negatively affecting other organisms and hence ecosystem processes and functions.

Organic metamorphism in the California petroleum basins; Chapter B, Insights from extractable bitumen and saturated hydrocarbons

USGS Publications Warehouse

Price, Leigh C.

2000-01-01

Seventy-five shales from the Los Angeles, Ventura, and Southern San Joaquin Valley Basins were extracted and analyzed. Samples were chosen on the basis of ROCK-EVAL analyses of a much larger sample base. The samples ranged in burial temperatures from 40 ? to 220 ? C, and contained hydrogen-poor to hydrogen-rich organic matter (OM), based on OM visual typing and a correlation of elemental kerogen hydrogen to carbon ratios with ROCK-EVAL hydrogen indices. By extractable bitumen measurements, rocks with hydrogen- poor OM in the Los Angeles Basin began mainstage hydrocarbon (HC) generation by 90 ? C. The HC concentrations maximized by 165 ? C, and beyond 165 ? C, HC and bitumen concentrations and ROCK-EVAL hydrogen indices all began decreasing to low values reached by 220 ? C, where HC generation was largely complete. Rocks with hydrogen-poor OM in the Southern San Joaquin Valley Basin commenced mainstage HC generation at 135 ? C and HC concentrations maximized by 180 ? C. Above 180 ? C, HC and bitumen concentrations and ROCK-EVAL hydrogen indices all decreased to low values reached by 214 ? C, again the process of HC generation being largely complete. In both cases, bell-shaped HC-generation curves were present versus depth (burial temperature). Mainstage HC generation had not yet begun in Ventura Basin rocks with hydrogen-poor OM by 140 ? C. The apparent lower temperature for initiation of mainstage generation in the Los Angeles Basin is attributed to very recent cooling in that basin from meteoric-water flow. Thus, HC generation there most probably occurred at higher burial temperatures. In contrast, mainstage HC generation, and all aspects of organic metamorphism, were strongly suppressed in rocks with hydrogen-rich OM at temperatures as high as 198 ? C. For example, shales from the Wilmington field (Los Angeles Basin) from 180 ? to 198 ? C retained ROCK-EVAL hydrogen indices of 550- 700 and had saturated-HC coefficients of only 4-15 mg/g organic carbon. The rocks with hydrogen-rich OM were subjected to the same burial conditions as the rocks with hydrogenpoor OM. We attribute this suppression of organic metamorphism in this study primarily to much stronger bonds in the hydrogen-rich OM compared to the bonds in hydrogen-poor OM. Trends in bitumen compositions (qualitative characteristics) versus burial temperature were also very different for rocks with hydrogen-poor OM compared to that in rocks with hydrogen- rich OM. This observation demonstrated that the two OM types also had significantly different reaction pathways, in addition to different reaction kinetics. Strong exploration implications arise from these observations. Above 40?C, but before mainstage HC generation, a lowtemperature (pre-mainstage) HC generation occurred in all rocks, and all OM types, studied. This low-temperature generation resulted in significant qualitative changes in the bitumen and HCS (hydrocarbons) from rocks of all OM types, especially in rocks with hydrogen-rich OM, from 40 ? to 70 ? C. This, and previous studies, document that very high carbon-normalized concentrations of indigenous bitumen and HCS occur in late Neogene immature rocks of any OM type in all southern California basins. This characteristic is attributed to the low-temperature generation occurring in both sulfur-poor and sulfur-rich kerogens, which originally had unusually high concentrations of weak (15-40 Kcal/mole) bonds. These observations and considerations have marked relevance to exploration regarding the possible formation of commercial oil deposits at immature ranks in these basins. Other significant geochemical observations also result from this study.

Influence of activated carbon preloading by EfOM fractions from treated wastewater on adsorption of pharmaceutically active compounds.

PubMed

Hu, Jingyi; Shang, Ran; Heijman, Bas; Rietveld, Luuk

2016-05-01

In this study, the preloading effects of different fractions of wastewater effluent organic matter (EfOM) on the adsorption of trace-level pharmaceutically active compounds (PhACs) onto granular activated carbon (GAC) were investigated. A nanofiltration (NF) membrane was employed to separate the EfOM by size, and two GACs with distinct pore structures were chosen for comparison. The results showed that preloading with EfOM substantially decreased PhAC uptake of the GACs; however, comparable PhAC adsorption capacities were achieved on GACs preloaded by feed EfOM and the NF-permeating EfOM. This indicates that: (1) the NF-rejected, larger EfOM molecules with an expectation to block the PhAC adsorption pores exerted little impact on the adsorbability of PhACs; (2) the smaller EfOM molecules present in the NF permeate contributed mainly to the decrease in PhAC uptake, mostly due to site competition. Of the two examined GACs, the wide pore-size-distributed GAC was found to be more susceptible to EfOM preloading than the microporous GAC. Furthermore, among the fourteen investigated PhACs, the negatively charged hydrophilic PhACs were generally subjected to a greater EfOM preloading impact. Copyright © 2016 Elsevier Ltd. All rights reserved.

Organic matter dynamics in a karstic watershed: Example from Santa Fe River, Florida, USA

NASA Astrophysics Data System (ADS)

Jin, J.; Khadka, M. B.; Martin, J. B.; Zimmerman, A. R.

2011-12-01

Organic matter (OM) dynamics in karstic watersheds can involve a range of interactions between organic and inorganic phases of carbon. These interactions include OM remineralization, which will changes its lability, increase dissolved inorganic carbon (DIC) concentrations, reduce pH, and enhance carbonate mineral dissolution. Dissolved organic carbon (DOC) concentrations are elevated in black-water rivers of northern Florida from both allochthonous and autochthonous sources and these rivers flow into and interact with the karstic Floridan Aquifer. One such river, the Santa Fe River, is split into upper confined and lower unconfined watersheds by the Cody Scarp, which represent the erosional edge of a regional confining unit. Water samples were collected from 8 sites across the entire Santa Fe River watershed (SFRW) during 9 sampling trips from December 2009 to May 2011 at flow conditions that ranged from 27 to 39 m3/s, with the highest flow about 45% higher than baseflow. At sites above the Cody Scarp, the river has elevated DOC concentrations, which decrease downstream, while dissolved inorganic carbon (DIC) and δ13C-DIC show opposite trends. At high flow, DOC concentrations progressively decrease downstream from dilution by low-DOC water discharging from the Floridan Aquifer. At low flow, the water chemistry varies little from upstream to downstream, largely because the composition of upstream water becomes similar to that of downstream water. DOC is inversely and linearly correlated with DIC and δ13C-DIC, but the slope of the correlations vary with discharge, with low flow having more negative slopes than high flow. The OM becomes more labile with distance downstream as assessed using two fluorescence indices, biological/autochthonous index (BIX) and humification index (HIX). This increase in lability suggests that DOC is produced in the river, and this production is reflected in a downstream increase in DOC flux regardless of dilution by the influx of low-DOC groundwater. Primary production was 5 to 25 times higher during high and low flow, respectively, in the lower than in the upper SFRW. No decrease in DOC with a concomitant increase in DIC was observed, however, suggesting observations of microbial consumption of OM is masked by primary production and gain of DIC-rich and DOC-poor groundwater. The upper SFRW has lower saturation index (SI; -2.9 and -0.7 for high and low flow, respectively) than the lower SFRW (0.0 and 0.3 for high and low flow, respectively). The downstream shift in SI reflects dissolution of the carbonate minerals and gain of water from the Floridan Aquifer that had equilibrated with carbonate minerals. OM dynamics in the SFRW are closely linked to the allochthonous OM derived from the upper SFRW, as well as primary production in the lower watershed. Both allochthonous and autochthonous OM can be important in abiotic processes such as carbonate mineral dissolution, but flow conditions mediate the magnitudes of the reactions.

The Pulse of the Amazon

NASA Astrophysics Data System (ADS)

Spencer, R. G.; Moura, J. M. S.; Mitsuya, M.; Peucker-Ehrenbrink, B.; Holmes, R. M.; Galy, V.; Drake, T.

2017-12-01

Rivers integrate over a fixed and definable area (the watershed), with their discharge and chemistry at any given point a function of upstream processes. As a consequence, examination of riverine discharge and chemistry can provide powerful indictors of change within a watershed. To assess the validity of this approach long-term datasets are required from fluvial environments around the globe. The Amazon River delivers one-fifth of the total freshwater discharged to the ocean and so represents a fundamentally important site for examination of long-term major ion, trace element, nutrient, and organic matter (OM) export. Here we describe data from a multi-year, monthly sampling campaign of the Amazon River at Obidos (Para, Brazil). Clear seasonality in all analyte fluxes is apparent and is linked to hydrology, however dissolved OM composition appears dominated by allochthonous sources throughout the year as evidenced by optical parameters indicative of high molecular weight and high relative aromatic content. Annual loads of some analytes for 2011-2013 inclusive varied by up to 50%, highlighting significant variability in flux from year to year that was linked to inter-annual hydrologic shifts (i.e. higher fluxes in wetter years). Finally, encompassing both intra- and inter-annual variability, a robust correlation was observed between chromophoric dissolved OM (CDOM) absorbance and dissolved organic carbon (DOC) concentration highlighting the potential to improve DOC flux estimates at this globally significant site via CDOM measurements from in situ technologies or remote sensing techniques.

Integrating microbial physiology and enzyme traits in the quality model

NASA Astrophysics Data System (ADS)

Sainte-Marie, Julien; Barrandon, Matthieu; Martin, Francis; Saint-André, Laurent; Derrien, Delphine

2017-04-01

Microbe activity plays an undisputable role in soil carbon storage and there have been many calls to integrate microbial ecology in soil carbon (C) models. With regard to this challenge, a few trait-based microbial models of C dynamics have emerged during the past decade. They parameterize specific traits related to decomposer physiology (substrate use efficiency, growth and mortality rates...) and enzyme properties (enzyme production rate, catalytic properties of enzymes…). But these models are built on the premise that organic matter (OM) can be represented as one single entity or are divided into a few pools, while organic matter exists as a continuum of many different compounds spanning from intact plant molecules to highly oxidised microbial metabolites. In addition, a given molecule may also exist in different forms, depending on its stage of polymerization or on its interactions with other organic compounds or mineral phases of the soil. Here we develop a general theoretical model relating the evolution of soil organic matter, as a continuum of progressively decomposing compounds, with decomposer activity and enzyme traits. The model is based on the notion of quality developed by Agren and Bosatta (1998), which is a measure of molecule accessibility to degradation. The model integrates three major processes: OM depolymerisation by enzyme action, OM assimilation and OM biotransformation. For any enzyme, the model reports the quality range where this enzyme selectively operates and how the initial quality distribution of the OM subset evolves into another distribution of qualities under the enzyme action. The model also defines the quality range where the OM can be uptaken and assimilated by microbes. It finally describes how the quality of the assimilated molecules is transformed into another quality distribution, corresponding to the decomposer metabolites signature. Upon decomposer death, these metabolites return to the substrate. We explore here the how microbial physiology and enzyme traits can be incorporated in a model based on a continuous representation of the organic matter and evaluate how it can improve our ability to predict soil C cycling. To do so, we analyse the properties of the model by implementing different scenarii and test the sensitivity of its parameters. Agren, G. I., & Bosatta, E. (1998). Theoretical ecosystem ecology: understanding element cycles. Cambridge University Press.

Temperature & wood source control PyOM turnover in a Northern American forest

NASA Astrophysics Data System (ADS)

Hatton, Pierre-Joseph; Le Moine, James; Auclerc, Apolline; Gormley, Mark; Filley, Tim R.; Nadelhoffer, Knute J.; Bird, Jeff. A.

2016-04-01

Surprisingly little is known about how pyrolysis temperature and wood source affect the stability of forest-fire derived pyrogenic organic matter (PyOM). Here, we show that wood source and temperature affect in situ mineralization rates of PyOM in soils for two co-occurring gymnosperm (jack pine; JP [Pinus banksiana]) and angiosperm (red maple; RM [Acer rubrum])¬ species from North American boreal-temperate ecotones. We assess the effect of pyrolysis temperature on PyOM fates by following the decay of 13C/15N-enriched JP wood (JPwood) and PyOM produced at 300 °C (JP300) and 450 °C (JP450); and assess the effect of PyOM wood source by comparing fates of JP450 and RM450. JPwood mineralized 18× faster than JP300 and 44× faster than JP450 after 2.8y. RM450 mineralized initially faster than JP450 during the first ~2y, but became equivalent afterwards (1.1±0.2% of CO¬2 losses after 2.8y). Modeled turnover times suggest that this can be attributed to ~1% of fast-cycling PyOM (<3y). Slower-cycling pools are 12× faster for JPwood (13±5y) than for JP300 (157±28y) and 55× faster than for JP450 (700±229y). Modeled turnover times of the slow-cycling pools were equivalent for JP450 and RM450. The priming effect was positive for JPwood (0.10±0.05), neutral for JP300 (-0.02±0.04), and negative for JP450 (-0.15±0.03) and RM50 (-0.59±0.03). DOC losses were minimal compared with CO2 losses (DOC:CO2 ratio ≤0.005), but followed the same patterns: JPwood 6× greater than that of JP300 and 39× greater compared with JP450. After 1y, C recoveries were lower for JPwood than for PyOM, with no influence of pyrolysis temperature or wood source (yet); N recoveries did not differ. PLFA-(13)C data reveal that (i) treatments have similar microbial communities after 1y, (ii) JPwood is preferentially utilized by fungi, and (iii) bacteria increasingly utilize PyOM as pyrolysis temperature increases. Estimated carbon use efficiency decreased with increasing pyrolysis temperature (JPwood~JP300>JP450~RM450). Although insignificant, potential phenol oxidase and peroxidase activities decrease with increasing pyrolysis temperature. Neither PyOM nor wood additions (~11% of soil C stock 0-20 cm depth) affected pH or Ec after 1y. We provide the first, field experimental evidence that pyrolysis temperature and wood source affect the turnover of PyOM in soil. We show faster, initial decay for PyOM produced at lesser temperature and RM (angiosperm) compared with JP (gymnosperm). This study offers realistic insights on (i) the controls underlying in situ PyOM turnover, and on (ii) how ongoing/projected changes in tree species composition and fire frequency/intensity/distribution may affect PyOM in soil of North America temperate-boreal ecotones.

Dissolved lipid production in the Northern Adriatic (Mediterranean) in response to sea surface warmin

NASA Astrophysics Data System (ADS)

Gasparovic, Blazenka; Novak, Tihana; Godrijan, Jelena; Mlakar, Marina; MAric, Daniela; Djakovac, Tamara

2017-04-01

Marine dissolved organic matter (OM) represents one of the largest active pools of organic carbon in the global carbon cycle. Oceans and seas are responsible for half of global primary production. Ocean warming caused by climate change is already starting to impact the marine life that necessary will have impact on ocean productivity. The partition of OM production by phytoplankton (major OM producer in seas and ocens) in the conditions of rising temperatures may considerably change. This has implications for the export of organic matter from the photic zone. In this study, we set out to see how annual temperature changes between 10 and 30 C in the Northern Adriatic (Mediterranean) affect production of DOM and particularly dissolved lipids and lipid classes. We have sampled at two stations being oligotrophic and mesotrophic where we expected different system reaction to temperature changes. In addition, we performed microcosm incubations covering temperature range of the NA with nutrient amendments to test whether changes in the available nutrients would reflect those of dissolved OM in the NA. We have selected to work with extracellular OM produced during growth of diatom Chaetoceros curvisetus cultures according to the criteria that genera Chaetoceros are important component of the phytoplankton in the NA and are often among bloom-forming taxa. Details on the dissolved lipid and lipid classes production as plankton responce to rising temperature will be discussed.

Using organic biomarkers to trace the transport pathways of livestock-derived organic matter in the soil subsurface.

NASA Astrophysics Data System (ADS)

Lloyd, Charlotte; Michaelides, Katerina; Evershed, Richard; Chadwick, David; Dungait, Jennifer

2010-05-01

We explore the use of organic biomarkers as tracers for different components of livestock-derived organic matter (LD-OM) at two different spatial scales. We conducted six small-scale rainfall simulation experiments on a 30 × 30 × 30 cm soil lysimeter, following an application of bovine slurry at a rate of 5 l m-2. Throughout the experiment timed samples of leachate from the base of the lysimeter were collected, then soil cores were taken following the rainfall simulation. These samples were analysed in order to identify the most suitable biomarkers to trace dissolved and sediment-bound LD-OM respectively. The results showed that ammonium was an important tracer compound for dissolved LD-OM, along with other key low molecular weight compounds such as carbohydrates and amino acids. Analysis of the soil cores confirmed that compounds 5-β sigmastanol and 5-β epistigmastanol (5-β stanols) could be used very effectively to trace the sediment-bound and colloidal component of LD-OM. These specific organic compounds, which are identifiable by GC/MS analysis, only occur due to biohydrogenation of plant sterols in a ruminant gut, providing a unique opportunity to trace bovine faecal matter via sediment pathways. These tracers were then applied to a larger 3-D hillslope system by using University of Bristol's TRACE (Test Rig for Advancing Connectivity Experiments) facility. TRACE is a large-scale dual axis soil-slope measuring 6 m long × 2.5 m wide × 0.3 m deep accompanied by a 6-nozzle rainfall simulator. In these experiments slurry was only applied to the top 1 m section of the hillslope, in order to trace how the LD-OM was transported in the soil system. The slope allows the collection of leachate from the soil surface, from lateral through-flow and infiltrated water which reached the soil base (indicating deeper pathways). This enabled the distinction between LD-OM transported via different hydrological pathways. Soil cores were also taken across the soil surface and analysed for 5-β stanols, this allowed the spatial distribution of LD-OM to be determined following the rainfall event. The results showed that not only is LD-OM transported on the surface of the hillslope via overland flow, but the dissolved component infiltrates through the soil profile and is transported via deeper hydrological flowpaths. 5-β stanol analysis showed that soil erosion processes were extremely important, as LD-OM was found downslope of the application area and in eroded material lost from the base of the experimental hillslope. These experiments provided new insights into how LD-OM interacts with the soil-water system and allows quantification of the contamination risk posed. This is important as 90 million tonnes of LD-OM is applied to land annually in the UK. It is well known that there is a potential for contamination of water courses by nitrate, ammonium and other faecal-derived pollutants such as E. Coli through runoff from treated land. Pollution from LD-OM has now been shown to extend to the contamination of subsurface pathways and potentially groundwater resources.

Strong sorption of PCBs to nanoplastics, microplastics, carbon nanotubes, and fullerenes.

PubMed

Velzeboer, I; Kwadijk, C J A F; Koelmans, A A

2014-05-06

The presence of microplastic and carbon-based nanoparticles in the environment may have implications for the fate and effects of traditional hydrophobic chemicals. Here we present parameters for the sorption of 17 CB congeners to 10-180 μm sized polyethylene (micro-PE), 70 nm polystyrene (nano-PS), multiwalled carbon nanotubes (MWCNT), fullerene (C60), and a natural sediment in the environmentally relevant 10(-5)-10(-1) μg L(-1) concentration range. Effects of salinity and sediment organic matter fouling were assessed by measuring the isotherms in fresh- and seawater, with and without sediment present. Sorption to the "bulk" sorbents sediment organic matter (OM) and micro-PE occurred through linear hydrophobic partitioning with OM and micro-PE having similar sorption affinity. Sorption to MWCNT and nano-PS was nonlinear. PCB sorption to MWCNT and C60 was 3-4 orders of magnitude stronger than to OM and micro-PE. Sorption to nano-PS was 1-2 orders of magnitude stronger than to micro-PE, which was attributed to the higher aromaticity and surface-volume ratio of nano-PS. Organic matter effects varied among sorbents, with the largest OM fouling effect observed for the high surface sorbents MWCNT and nano-PS. Salinity decreased sorption for sediment and MWCNT but increased sorption for the polymers nano-PS and micro-PE. The exceptionally strong sorption of (planar) PCBs to C60, MWCNT, and nano-PS may imply increased hazards upon membrane transfer of these particles.

Photochemical dissolution of organic matter from resuspended sediments: Impact of source and diagenetic state on photorelease

NASA Astrophysics Data System (ADS)

Helms, J. R.; Glinski, D. A.; Mead, R. N.; Southwell, M.; Avery, G. B., Jr.; Kieber, R. J.; Skrabal, S. A.

2015-12-01

Resuspended sediments exposed to simulated solar radiation release dissolved organic carbon (DOC). However, it is unclear how the provenance of sedimentary organic matter (OM) impacts this photorelease. In the first geographically extensive study of this phenomenon, twenty three size fractionated, fine grained sediments (< ca. 10-20 μm) from a variety of drainage basins were resuspended (at suspended solid loading of 29- 255 mg/l) and exhibited a net photochemical DOC release ranging from 2 to 178 μmol/g/h. There was a logarithmic increase in photoreleased DOC vs. the proportion of sedimentary OC (%), most likely due to photon limitation at high sedimentary OC loading (i.e. high mass-specific absorption limiting light penetration). Sediment source and quality - determined using lipid biomarkers - had a significant effect on DOC photorelease. The fatty acid terrestrial aquatic ratio (TARFA) indicated that terrestrially derived sediments exhibited relatively greater DOC photorelease. The long chain carbon preference index (CPI24-34) indicated that diagenetically unaltered terrestrial OM photoreleased more DOC than diagenetically altered terrestrial OM. The short chain carbon preference index (CPI14-22) demonstrated that sediments containing diagenetically altered planktonic or algal derived OM had a greater photorelease rate of DOC than fresh algal OM. This suggests that humic substances (humus and/or adsorbed humic and fulvic acids) play an important role in the photochemical dissolution of OC regardless of whether or not they are imported from upstream (i.e. terrestrial humics) or generated within the depositional or sedimentary environment (i.e. humification of algal dissolved OM).

Sulfate reduction controlled by organic matter availability in deep sediment cores from the saline, alkaline Lake Van (Eastern Anatolia, Turkey)

PubMed Central

Glombitza, Clemens; Stockhecke, Mona; Schubert, Carsten J.; Vetter, Alexandra; Kallmeyer, Jens

2013-01-01

As part of the International Continental Drilling Program deep lake drilling project PaleoVan, we investigated sulfate reduction (SR) in deep sediment cores of the saline, alkaline (salinity 21.4‰, alkalinity 155 m mEq-1, pH 9.81) Lake Van, Turkey. The cores were retrieved in the Northern Basin (NB) and at Ahlat Ridge (AR) and reached a maximum depth of 220 m. Additionally, 65–75 cm long gravity cores were taken at both sites. SR rates (SRR) were low (≤22 nmol cm-3 day-1) compared to lakes with higher salinity and alkalinity, indicating that salinity and alkalinity are not limiting SR in Lake Van. Both sites differ significantly in rates and depth distribution of SR. In NB, SRR are up to 10 times higher than at AR. SR could be detected down to 19 mblf (meters below lake floor) at NB and down to 13 mblf at AR. Although SRR were lower at AR than at NB, organic matter (OM) concentrations were higher. In contrast, dissolved OM in the pore water at AR contained more macromolecular OM and less low molecular weight OM. We thus suggest, that OM content alone cannot be used to infer microbial activity at Lake Van but that quality of OM has an important impact as well. These differences suggest that biogeochemical processes in lacustrine sediments are reacting very sensitively to small variations in geological, physical, or chemical parameters over relatively short distances. PMID:23908647

Substrate potential of last interglacial to Holocene permafrost organic matter for future microbial greenhouse gas production

NASA Astrophysics Data System (ADS)

Stapel, Janina G.; Schwamborn, Georg; Schirrmeister, Lutz; Horsfield, Brian; Mangelsdorf, Kai

2018-04-01

In this study the organic matter (OM) in several permafrost cores from Bol'shoy Lyakhovsky Island in NE Siberia was investigated. In the context of the observed global warming the aim was to evaluate the potential of freeze-locked OM from different depositional ages to act as a substrate provider for microbial production of greenhouse gases from thawing permafrost. To assess this potential, the concentrations of free and bound acetate, which form an appropriate substrate for methanogenesis, were determined. The largest free-acetate (in pore water) and bound-acetate (organic-matrix-linked) substrate pools were present in interstadial marine isotope stage (MIS) 3 and stadial MIS 4 Yedoma permafrost deposits. In contrast, deposits from the last interglacial MIS 5e (Eemian) contained only a small pool of substrates. The Holocene (MIS 1) deposits revealed a significant bound-acetate pool, representing a future substrate potential upon release during OM degradation. Additionally, pyrolysis experiments on the OM allocated an increased aliphatic character to the MIS 3 and 4 Late Pleistocene deposits, which might indicate less decomposed and presumably more easily degradable OM. Biomarkers for past microbial communities, including those for methanogenic archaea, also showed the highest abundance during MIS 3 and 4, which indicated OM-stimulated microbial degradation and presumably greenhouse gas production during time of deposition. On a broader perspective, Arctic warming will increase and deepen permafrost thaw and favor substrate availability from older freeze-locked permafrost deposits. Thus, the Yedoma deposits especially showed a high potential for providing substrates relevant for microbial greenhouse gas production.

The gravitational-optical methods for examination of the hypothesis about galaxies and antigalaxies in the Universe

NASA Astrophysics Data System (ADS)

Gribov, I. A.; Trigger, S. A.

2018-01-01

The optical-gravitational methods for distinction between photons and antiphotons (galaxies, emitting photons and antigalaxies, emitting antiphotons) in the proposed hypothesis of totally gravitationally neutral (TGN)-Universe are considered. These methods are based on the extension of the earlier proposed the gravitationally neutral Universe concept, including now gravitational neutrality of vacuum. This concept contains (i) enlarged unbroken baryon-like, charge, parity and time and full ±M gr gravitational symmetries between all massive elementary particles-antiparticles, including (ia) ordinary matter (OM)-ordinary antimatter (OAM), (ib) dark matter (DM)-dark antimatter (DAM) and (ii) the resulting gravitational repulsion between equally presented (OM+DM)-galactic and (OAM+DAM)-antigalactic clusters, what spatially isolates and preserves their mutual annihilations in the large-scale TGN-Universe. It is assumed the gravitational balance not only between positive and negative gravitational masses of elementary particles and antiparticles, but also between all massless fields of the quantum field theory (QFT), including the opposite gravitational properties of photons and antiphotons, etc, realizing the totally gravitationally neutral vacuum in the QFT. These photons and antiphotons could be distinguishable optically-gravitationally, if one can observe a massive, deviating OM-star or a deviating (OM+DM)-galaxy from our galactic group, moving fast enough on the heavenly sphere, crossing the line directed to spatially separated far-remote galactic clusters (with the visible OM-markers, emitting photons) or antigalactic cluster (with the visible OAM-markers, emitting antiphotons). The deviations and gravitational microlensing with temporarily increased or decreased brightness of their OM and OAM rays will be opposite, indicating the galaxies and antigalaxies in the Universe.

Effects of Fenton treatment on the properties of effluent organic matter and their relationships with the degradation of pharmaceuticals and personal care products.

PubMed

Li, Wei; Nanaboina, Venkateswarlu; Zhou, Qixing; Korshin, Gregory V

2012-02-01

This study examined effects of Fenton oxidation on trace level pharmaceuticals and personal care products (PPCPs) commonly occurring in wastewater. The tested PPCPs included acetaminophen, atenolol, atrazine, carbamazepine, metoprolol, dilantin, DEET, diclofenac, pentoxifylline, oxybenzone, caffeine, fluoxetine, gemfibrozil, ibuprofen, iopromide, naproxen, propranolol, sulfamethoxazole, bisphenol-A and trimethoprim. Transformations of effluent organic matter (EfOM) caused by Fenton oxidation were also quantified. All tested PPCPs, except atrazine and iopromide, were completely removed by Fenton treatment carried out using a 20mg/L Fe (II) concentration and a 2.5 H(2)O(2)/Fe (II) molar ratio. Up to 30% on the total carbon concentration was removed during Fenton treatment which was accompanied by the oxidation of EfOM molecules and formation of oxidation products such as oxalic, formic and acetic acids and, less prominently, formaldehyde, acetaldehyde, propionaldehyde and glycolaldehyde. The absorbance of EfOM treated with Fenton reagent at varying Fe (II) concentration and contact time underwent a consistent decrease. The relative decrease of EfOM absorbance was strongly and unambiguously correlated with the removal of all tested PPCPs. Copyright © 2011 Elsevier Ltd. All rights reserved.

Characterization of uranium redox state in organic-rich Eocene sediments.

PubMed

Cumberland, Susan A; Etschmann, Barbara; Brugger, Joël; Douglas, Grant; Evans, Katy; Fisher, Louise; Kappen, Peter; Moreau, John W

2018-03-01

The presence of organic matter (OM) has a profound impact on uranium (U) redox cycling, either limiting or promoting the mobility of U via binding, reduction, or complexation. To understand the interactions between OM and U, we characterised U oxidation state and speciation in nine OM-rich sediment cores (18 samples), plus a lignite sample from the Mulga Rock polymetallic deposit in Western Australia. Uranium was unevenly dispersed within the analysed samples with 84% of the total U occurring in samples containing >21 wt % OM. Analyses of U speciation, including x-ray absorption spectroscopy and bicarbonate extractions, revealed that U existed predominately (∼71%) as U(VI), despite the low pH (4.5) and nominally reducing conditions within the sediments. Furthermore, low extractability by water, but high extractability by a bi-carbonate solution, indicated a strong association of U with particulate OM. The unexpectedly high proportion of U(VI) relative to U(IV) within the OM-rich sediments implies that OM itself does not readily reduce U, and the reduction of U is not a requirement for immobilizing uranium in OM-rich deposits. The fact that OM can play a significant role in limiting the mobility and reduction of U(VI) in sediments is important for both U-mining and remediation. Copyright © 2017 Elsevier Ltd. All rights reserved.

Anaerobic ammonia removal in presence of organic matter: a novel route.

PubMed

Sabumon, P C

2007-10-01

This study describes the feasibility of anaerobic ammonia removal process in presence of organic matter. Different sources of biomass collected from diverse eco-systems containing ammonia and organic matter (OM) were screened for potential anaerobic ammonia removal. Sequential batch studies confirmed the possibility of anaerobic ammonia removal in presence of OM, but ammonia was oxidized anoxically to nitrate (at oxidation reduction potential; ORP=-248+/-25 mV) by an unknown mechanism unlike in the reported anammox process. The oxygen required for oxidation of ammonia might have been generated through catalase enzymatic activity of facultative anaerobes in mixed culture. The oxygen generation possibility by catalase enzyme route was demonstrated. Among the inorganic electron acceptors (NO(2)(-), NO(3)(-) and SO(4)(2-)) studied, NO(2)(-) was found to be most effective in total nitrogen removal. Denitrification by the developed culture was much effective and faster compared to ammonia oxidation. The results of this study show that anaerobic ammonia removal is feasible in presence of OM. The novel nitrogen removal route is hypothesized as enzymatic anoxic oxidation of NH(4)(+) to NO(3)(-), followed by denitrification via autotrophic and/or heterotrophic routes. The results of batch study were confirmed in continuous reactor operation.

Pyrogenic organic matter production from wildfires: a missing sink in the global carbon cycle.

PubMed

Santín, Cristina; Doerr, Stefan H; Preston, Caroline M; González-Rodríguez, Gil

2015-04-01

Wildfires release substantial quantities of carbon (C) into the atmosphere but they also convert part of the burnt biomass into pyrogenic organic matter (PyOM). This is richer in C and, overall, more resistant to environmental degradation than the original biomass, and, therefore, PyOM production is an efficient mechanism for C sequestration. The magnitude of this C sink, however, remains poorly quantified, and current production estimates, which suggest that ~1-5% of the C affected by fire is converted to PyOM, are based on incomplete inventories. Here, we quantify, for the first time, the complete range of PyOM components found in-situ immediately after a typical boreal forest fire. We utilized an experimental high-intensity crown fire in a jack pine forest (Pinus banksiana) and carried out a detailed pre- and postfire inventory and quantification of all fuel components, and the PyOM (i.e., all visually charred, blackened materials) produced in each of them. Our results show that, overall, 27.6% of the C affected by fire was retained in PyOM (4.8 ± 0.8 t C ha(-1)), rather than emitted to the atmosphere (12.6 ± 4.5 t C ha(-1)). The conversion rates varied substantially between fuel components. For down wood and bark, over half of the C affected was converted to PyOM, whereas for forest floor it was only one quarter, and less than a tenth for needles. If the overall conversion rate found here were applicable to boreal wildfire in general, it would translate into a PyOM production of ~100 Tg C yr(-1) by wildfire in the global boreal regions, more than five times the amount estimated previously. Our findings suggest that PyOM production from boreal wildfires, and potentially also from other fire-prone ecosystems, may have been underestimated and that its quantitative importance as a C sink warrants its inclusion in the global C budget estimates. © 2014 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.

Pyrogenic organic matter production from wildfires: a missing sink in the global carbon cycle

PubMed Central

Santín, Cristina; Doerr, Stefan H; Preston, Caroline M; González-Rodríguez, Gil

2015-01-01

Wildfires release substantial quantities of carbon (C) into the atmosphere but they also convert part of the burnt biomass into pyrogenic organic matter (PyOM). This is richer in C and, overall, more resistant to environmental degradation than the original biomass, and, therefore, PyOM production is an efficient mechanism for C sequestration. The magnitude of this C sink, however, remains poorly quantified, and current production estimates, which suggest that ∽1-5% of the C affected by fire is converted to PyOM, are based on incomplete inventories. Here, we quantify, for the first time, the complete range of PyOM components found in-situ immediately after a typical boreal forest fire. We utilized an experimental high-intensity crown fire in a jack pine forest (Pinus banksiana) and carried out a detailed pre- and postfire inventory and quantification of all fuel components, and the PyOM (i.e., all visually charred, blackened materials) produced in each of them. Our results show that, overall, 27.6% of the C affected by fire was retained in PyOM (4.8 ± 0.8 t C ha−1), rather than emitted to the atmosphere (12.6 ± 4.5 t C ha−1). The conversion rates varied substantially between fuel components. For down wood and bark, over half of the C affected was converted to PyOM, whereas for forest floor it was only one quarter, and less than a tenth for needles. If the overall conversion rate found here were applicable to boreal wildfire in general, it would translate into a PyOM production of ∽100 Tg C yr−1 by wildfire in the global boreal regions, more than five times the amount estimated previously. Our findings suggest that PyOM production from boreal wildfires, and potentially also from other fire-prone ecosystems, may have been underestimated and that its quantitative importance as a C sink warrants its inclusion in the global C budget estimates. PMID:25378275

Ferrous Iron Oxidation under Varying pO2 Levels: The Effect of Fe(III)/Al(III) Oxide Minerals and Organic Matter.

PubMed

Chen, Chunmei; Thompson, Aaron

2018-01-16

Abiotic Fe(II) oxidation by O 2 commonly occurs in the presence of mineral sorbents and organic matter (OM) in soils and sediments; however, this tertiary system has rarely been studied. Therefore, we examined the impacts of mineral surfaces (goethite and γ-Al 2 O 3 ) and organic matter [Suwannee River fulvic acid (SRFA)] on Fe(II) oxidation rates and the resulting Fe(III) (oxyhydr)oxides under 21 and 1% pO 2 at pH 6. We tracked Fe dynamics by adding 57 Fe(II) to 56 Fe-labeled goethite and γ-Al 2 O 3 and characterized the resulting solids using 57 Fe Mössbauer spectroscopy. We found Fe(II) oxidation was slower at low pO 2 and resulted in higher-crystallinity Fe(III) phases. Relative to oxidation of Fe(II) (aq) alone, both goethite and γ-Al 2 O 3 surfaces increased Fe(II) oxidation rates regardless of pO 2 levels, with goethite being the stronger catalyst. Goethite surfaces promoted the formation of crystalline goethite, while γ-Al 2 O 3 favored nano/small particle or disordered goethite and some lepidocrocite; oxidation of Fe(II) aq alone favored lepidocrocite. SRFA reduced oxidation rates in all treatments except the mineral-free systems at 21% pO 2 , and SRFA decreased Fe(III) phase crystallinity, facilitating low-crystalline ferrihydrite in the absence of mineral sorbents, low-crystalline lepidocrocite in the presence of γ-Al 2 O 3 , but either crystalline goethite or ferrihydrite when goethite was present. This work highlights that the oxidation rate, the types of mineral surfaces, and OM control Fe(III) precipitate composition.

Geoaccumulation assessment of heavy metal pollution in Ikwo soils, eastern Nigeria.

PubMed

Tyopine, Andrew A; Jayeoye, Titilope J; Okoye, Chukwuma O B

2018-01-04

An imbalance in the environment's composition leads to significant effect on human activities such as farming. Of importance are heavy metals which are introduced anthropogenically or naturally. This calls for environmental monitoring and subsequent remediation if needed. An environmental monitoring exercise was conducted on Ikwo soils of Ebonyi State, eastern Nigeria with the aim of determining concentration levels for possible remediation. A total of 18 soil composite samples taken at 0-50 cm below soil surface from fallowed and cultivated soils not fertilized were subjected to heavy metal analyses and fertility indices like: organic matter (OM), cation exchange capacity (CEC), % total nitrogen (%TN), organic carbon (OC), and salinity. A correlation at 95% confidence level between geo-accumulations (I geo ) of the various heavy metals with salinity, OM, and CEC of the sampled soils reveals that I geo could be a contributing factor to the fertility status of the soils. With the aid of inductively coupled plasma atomic emission spectrophotometer (ICP-AES), the distribution pattern was determined as Mn> Fe> Zn>Cu> Mo> Cd> V>Hg>Ti> Ni>Bi> Pb> Co>Ag>Au> Cr>Pd>Pt. The I geo of the heavy metals in the study area varied from heavily to extremely contaminated levels. A remediation exercise was recommended on Ikwo soils due to their high salinity level and low CEC.

Fractionation of humic acids upon adsorption on montmorillonite and palygorskite

NASA Astrophysics Data System (ADS)

Alekseeva, T. V.; Zolotareva, B. N.

2013-06-01

The adsorption of three humic acid (HA) preparations by clays—montmorillonite (Wyoming, USA) and palygorskite (Kolomenskoe district, Moscow oblast)—has been studied. The HA preparations were isolated from samples of the humus-accumulative horizons of a leached chernozem (Voronezh) and a chestnut soil (Volgograd), and a commercial preparation of sodium humate (Aldrich) was also used. The solid-state 13C NMR spectroscopy and IR spectroscopy revealed the selective adsorption of structural HA fragments (alkyls, O-alkyls (carbohydrates), and acetal groups) on these minerals. As a result, the aromaticity of the organic matter (OM) in the organic-mineral complexes (OMCs) and the degree of its humification have been found to be lower compared to the original HA preparations. The fractionation of HAs is controlled by the properties of the mineral surfaces. The predominant enrichment of OMCs with alkyls has been observed for montmorillonite, as well as an enrichment with O-alkyls (carbohydrates) for palygorskite. A decrease in the C : N ratio has been noted in the elemental composition of the OM in complexes, which reflected its more aromatic nature and (or) predominant sorption of N-containing structural components of HA molecules. The adsorption of HA preparations by montmorillonite predominantly occurs on the external surface of mineral particles, and the interaction of nonpolar alkyl groups of HAs with this mineral belongs to weak (van der Waals, hydrophobic) interactions. The adsorption of HA preparations by palygorskite is at least partly of chemical nature: Si-OH groups of minerals are involved in the adsorption process. The formation of strong bonds between the OM and palygorskite explains the long-term (over 300 million years) retention of fossil fulvate-type OM in its complex with palygorskite, which we revealed previously.

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, one of two orbital maneuvering system (OMS) pods removed from Endeavour is lowered toward a transporter. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts. OMS pods are removed during Orbiter Major Modifications. Once removed, the OMS pods undergo in-depth structural inspections, system checks and the thrusters are changed out.

NASA Image and Video Library

2003-09-05

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, one of two orbital maneuvering system (OMS) pods removed from Endeavour is lowered toward a transporter. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts. OMS pods are removed during Orbiter Major Modifications. Once removed, the OMS pods undergo in-depth structural inspections, system checks and the thrusters are changed out.

KENNEDY SPACE CENTER, FLA. - Technicians in the Orbiter Processing Facility oversee removal of one of two orbital maneuvering system (OMS) pods from Endeavour. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts. OMS pods are removed during Orbiter Major Modifications. Once removed, the OMS pods undergo in-depth structural inspections, system checks and the thrusters are changed out.

NASA Image and Video Library

2003-09-05

KENNEDY SPACE CENTER, FLA. - Technicians in the Orbiter Processing Facility oversee removal of one of two orbital maneuvering system (OMS) pods from Endeavour. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts. OMS pods are removed during Orbiter Major Modifications. Once removed, the OMS pods undergo in-depth structural inspections, system checks and the thrusters are changed out.

KENNEDY SPACE CENTER, FLA. - Workers in the Orbiter Processing Facility prepare to remove one of two orbital maneuvering system (OMS) pods from Endeavour. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts. OMS pods are removed during Orbiter Major Modifications. Once removed, the OMS pods undergo in-depth structural inspections, system checks and the thrusters are changed out.

NASA Image and Video Library

2003-09-05

KENNEDY SPACE CENTER, FLA. - Workers in the Orbiter Processing Facility prepare to remove one of two orbital maneuvering system (OMS) pods from Endeavour. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts. OMS pods are removed during Orbiter Major Modifications. Once removed, the OMS pods undergo in-depth structural inspections, system checks and the thrusters are changed out.

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, one of two orbital maneuvering system (OMS) pods removed from Endeavour is suspended overhead. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts. OMS pods are removed during Orbiter Major Modifications. Once removed, the OMS pods undergo in-depth structural inspections, system checks and the thrusters are changed out.

NASA Image and Video Library

2003-09-05

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, one of two orbital maneuvering system (OMS) pods removed from Endeavour is suspended overhead. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts. OMS pods are removed during Orbiter Major Modifications. Once removed, the OMS pods undergo in-depth structural inspections, system checks and the thrusters are changed out.

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, one of two orbital maneuvering system (OMS) pods removed from Endeavour is lowered onto a transporter. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts. OMS pods are removed during Orbiter Major Modifications. Once removed, the OMS pods undergo in-depth structural inspections, system checks and the thrusters are changed out.

NASA Image and Video Library

2003-09-05

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, one of two orbital maneuvering system (OMS) pods removed from Endeavour is lowered onto a transporter. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts. OMS pods are removed during Orbiter Major Modifications. Once removed, the OMS pods undergo in-depth structural inspections, system checks and the thrusters are changed out.

Post-wildfire erosion in mountainous terrain leads to rapid and major redistribution of soil organic carbon

NASA Astrophysics Data System (ADS)

Abney, Rebecca B.; Sanderman, Jonathan; Johnson, Dale; Fogel, Marilyn L.; Berhe, Asmeret Asefaw

2017-11-01

Catchments impacted by wildfire typically experience elevated rates of post-fire erosion and formation and deposition of pyrogenic carbon (PyC). To better understand the role of erosion in post-fire soil carbon dynamics, we determined distribution of soil organic carbon in different chemical fractions before and after the Gondola fire in South Lake Tahoe, CA. We analyzed soil samples from eroding and depositional landform positions in control and burned plots pre- and post-wildfire (in 2002, 2003, and 10-years post-fire in 2013). We determined elemental concentrations, stable isotope compositions, and biochemical composition of organic matter (OM) using mid-infrared (MIR) spectroscopy for all of the samples. A subset of samples was analyzed by 13C cross polarization magic angle spinning nuclear magnetic resonance spectroscopy (CPMAS 13C-NMR). We combined the MIR and CPMAS 13C-NMR data in the Soil Carbon Research Program partial least squares regression model to predict distribution of soil carbon into three different fractions: 1) particulate, humic, and resistant organic matter fractions representing relatively fresh larger pieces of OM, 2) fine, decomposed OM, and 3) pyrogenic C, respectively. Samples from the post-fire eroding landform position showed no major difference in soil organic carbon (SOC) fractions one year post-fire. The depositional samples, however, had increased concentrations of all SOC fractions, particularly the fraction that resembles PyC, one year post-fire (2002), which had a mean of 160 g/kg compared with burned hillslope soils, which had 84 g/kg. The increase in all SOC fractions in the post-fire depositional landform position one year post-fire indicates significant lateral mobilization of the eroded PyC. In addition, our NMR analyses revealed a post-fire increase in both the aryl and O-aryl carbon compounds in the soils from the depositional landform position, indicating increases in soil PyC concentrations post-fire. After 10 years, the C concentration from all three fractions declined in the depositional landform position to below pre-fire levels likely due to further erosion or elevated rates of decomposition. Thus, we found, at this site, that both fire and erosion exert significant influence on the distribution of PyC throughout a landscape and its long-term fate in the soil system.

Origin and biochemical cycling of particulate nitrogen in the Mandovi estuary

NASA Astrophysics Data System (ADS)

Fernandes, Loreta

2011-09-01

Mandovi estuary is a tropical estuary strongly influenced by the southwest monsoon. In order to understand, sources and fate of particulate organic nitrogen, suspended particulate matter (SPM) collected from various locations, was analyzed for particulate organic carbon (POC) and particulate organic nitrogen (PON), δ 13C POC, total hydrolysable amino acid enantiomers ( L- and D- amino acids) concentration and composition. δ 13C POC values were depleted (-32 to -25‰) during the monsoon and enriched (-29.6 to -21‰) in the pre-monsoon season implying that OM was derived from terrestrial and marine sources during the former and latter season, respectively. The biological indicators such as C/N ratio, D-amino acids, THAA yields and degradation indices (DI) indicate that the particulate organic matter (POM) was relatively more degraded during the monsoon season. Conversely, during the pre-monsoon, the biological indicators indicated the presence of relatively fresh and labile POM derived from autochthonous sources. Amino acids such as alanine, aspartic acid, leucine, serine, arginine, and threonine in monsoon and glutamic acid, glycine, valine, lysine, and isoleucine in pre-monsoon were relatively abundant. Presence of bacterial biomarker, D-amino acids in the SPM of the estuary during both the seasons signifies important contribution of bacteria to the estuarine detrital ON pool. Based on D-amino acid yields, bacterial OM accounted for 16-34% (23.0 ± 6.7%) of POC and 29-75% (47.9 ± 18.7%) of PON in monsoon, and 30-78% (50.0 ± 15%) of POC and 34-79% (51.2 ± 13.3%) of the PON in pre-monsoon in the estuary. Substantial contribution of bacterial-N to PON indicates nitrogen (N) enrichment on terrestrial POM during the monsoon season. Transport of terrestrial POM enriched with bacterial OM to the coastal waters is expected to influence coastal productivity and ecosystem functioning during the monsoon season.

Concentrations and sources of polycyclic aromatic hydrocarbons in surface coastal sediments of the northern Gulf of Mexico

PubMed Central

2014-01-01

Background Coastal sediments in the northern Gulf of Mexico have a high potential of being contaminated by petroleum hydrocarbons, such as polycyclic aromatic hydrocarbons (PAHs), due to extensive petroleum exploration and transportation activities. In this study we evaluated the spatial distribution and contamination sources of PAHs, as well as the bioavailable fraction in the bulk PAH pool, in surface marsh and shelf sediments (top 5 cm) of the northern Gulf of Mexico. Results PAH concentrations in this region ranged from 100 to 856 ng g−1, with the highest concentrations in Mississippi River mouth sediments followed by marsh sediments and then the lowest concentrations in shelf sediments. The PAH concentrations correlated positively with atomic C/N ratios of sedimentary organic matter (OM), suggesting that terrestrial OM preferentially sorbs PAHs relative to marine OM. PAHs with 2 rings were more abundant than those with 5–6 rings in continental shelf sediments, while the opposite was found in marsh sediments. This distribution pattern suggests different contamination sources between shelf and marsh sediments. Based on diagnostic ratios of PAH isomers and principal component analysis, shelf sediment PAHs were petrogenic and those from marsh sediments were pyrogenic. The proportions of bioavailable PAHs in total PAHs were low, ranging from 0.02% to 0.06%, with higher fractions found in marsh than shelf sediments. Conclusion PAH distribution and composition differences between marsh and shelf sediments were influenced by grain size, contamination sources, and the types of organic matter associated with PAHs. Concentrations of PAHs in the study area were below effects low-range, suggesting a low risk to organisms and limited transfer of PAHs into food web. From the source analysis, PAHs in shelf sediments mainly originated from direct petroleum contamination, while those in marsh sediments were from combustion of fossil fuels. PMID:24641695

Sources and Distribution of Organic Matter in Sediments of the Louisiana Continental Shelf

EPA Science Inventory

Both riverine and marine sources of organic matter (OM) contribute to sediment organic pools, and either source can contribute significantly to sediment accumulation, burial, and remineralization rates on river dominated continental shelf systems. For the Louisiana continental sh...

Soil carbon and nitrogen erosion in forested catchments: implications for erosion-induced terrestrial carbon sequestration

Treesearch

E. M. Stacy; S. C. Hart; C. T. Hunsaker; D. W. Johnson; A. A. Berhe

2015-01-01

Lateral movement of organic matter (OM) due to erosion is now considered an important flux term in terrestrial carbon (C) and nitrogen (N) budgets, yet most published studies on the role of erosion focus on agricultural or grassland ecosystems. To date, little information is available on the rate and nature of OM eroded from forest ecosystems. We present annual...

Biomass removal and its effect on productivity of an artificially regenerated forest stand in the Missouri ozarks

Treesearch

Flex Jr. Ponder

2007-01-01

Intensive harvesting, which removes a greater proportion of the forest biomass than conventional harvesting and the associated nutrients, may cause a decline in forest productivity. Planted seedling response to three biomass removal levels (1. removal of boles only=OM1, 2. all surface organic matter removed, forest floor not removed=OM2, and 3. removal of all surface...

Impact of exotic earthworms on organic carbon sorption on mineral surfaces and soil carbon inventories in a northern hardwood forest

Treesearch

Amy Lyttle; Kyungsoo Yoo; Cindy Hale; Anthony Aufdenkampe; Stephen D. Sebestyen; Kathryn Resner; Alex Blum

2015-01-01

Exotic earthworms are invading forests in North America where native earthworms have been absent since the last glaciation. These earthworms bioturbate soils and may enhance physical interactions between minerals and organic matter (OM), thus affecting mineral sorption of carbon (C) which may affect C cycling. We quantitatively show how OM-mineral sorption and soil C...

Novel Insight for Organic Matter Sourcing: Interest of Time Resolved Fluorescence to Qualify and Quantify PAH Content of Solid Matrix at High Resolution

NASA Astrophysics Data System (ADS)

Quiers, M.; Perrette, Y.; Jacq, K.; Pousset, E.; Plassart, G.

2017-12-01

OM fluorescence is today a well-developed tool used to characterize and quantify organic matter (OM), but also to evaluate and discriminate OM fate and changes related to climate and environmental modifications. While fluorescence measurements on water and soils extracts provide information about organic fluxes today, solid phase fluorescence using natural archives allows to obtain high resolution records of OM evolution during time. These evolutions can be discussed in regards of climate and environmental perturbations detected in archives using different proxies, and thus provide keys for understanding factors driving carbon fluxes mechanisms. Among fluorescent organic species, Polycyclic Aromatic Hydrocarbons (PAH) have been used as probe molecules for organic contamination tracking. Moreover, monitoring studies have shown that PAH could also be used as markers to discriminates atmospheric and erosion factors leading to PAH and organic matter fluxes to the aquifer. PAH records in soils and natural archives appear as a promising proxy to follow both past atmospheric contamination and soil erosion. But, PAH fluorescence is difficult to discriminate from bulk OM fluorescence using steady-state fluorescence (SSF) technics as their fluorescence domains recover. Time resolved emission spectroscopy (TRES) increases the information provided by SSF technic, adding a time dimension to measurements and allowing to discriminate PAH fluorescence. We report here a first application of this technic on natural archives. The challenge is to obtain TRES signature along the sample, including for low PAH concentrations. This study aims to evaluate the reliability of high resolution TRES measurement as PAH carbon fluxes sources. Method is based on LIF instrument for solid phase fluorescence measurement. An instrument coupling an excitation system constituting by 2 pulsed lasers (266 and 355 nm) and a detection system was developed. This measurement provides high resolution record of PAH fluorescence. Preliminary results on stalagmite samples, lake sediments and soils will be reported. PAH content variations along the sample were compared with PAH concentration and with bulk OM content deduced from SSF records. The accuracy of the PAH fluorescence as source marker of fluxes will be discussed for each type of sample.

Improved end-member characterization of modern organic matter pools in the Ohrid Basin (Albania, Macedonia) and evaluation of new palaeoenvironmental proxies

NASA Astrophysics Data System (ADS)

Holtvoeth, J.; Rushworth, D.; Imeri, A.; Cara, M.; Vogel, H.; Wagner, T.; Wolff, G. A.

2015-08-01

We present elemental, lipid biomarker and compound-specific isotope (δ13C, δ2H) data for soils and leaf litter collected in the catchment of Lake Ohrid (Albania, Macedonia), as well as macrophytes, particulate organic matter and sediments from the lake itself. Lake Ohrid provides an outstanding archive of continental environmental change of at least 1.2 M years and the purpose of our study is to ground truth organic geochemical proxies that we developed in order to study past changes in the terrestrial biome. We show that soils dominate the lipid signal of the lake sediments rather than the vegetation or aquatic biomass, while compound-specific isotopes (δ13C, δ2H) determined for n-alkanoic acids confirm a dominant terrestrial source of organic matter to the lake. There is a strong imprint of suberin monomers on the composition of total lipid extracts and chain-length distributions of n-alkanoic acids, n-alcohols, ω-hydroxy acids and α,ω-dicarboxylic acids. Our end-member survey identifies that ratios of mid-chain length suberin-derived to long-chain length cuticular-derived alkyl compounds as well as their average chain length distributions can be used as new molecular proxies of organic matter sources to the lake. We tested these for the 8.2 ka event, a pronounced and widespread Holocene climate fluctuation. In SE Europe climate became drier and cooler in response to the event, as is clearly recognizable in the carbonate and organic carbon records of Lake Ohrid sediments. Our new proxies indicate biome modification in response to hydrological changes, identifying two phases of increased soil OM supply, first from topsoils and then from mineral soils. Our study demonstrates that geochemical fingerprinting of terrestrial OM should focus on the main lipid sources, rather than the living biomass. Both can exhibit climate-controlled variability, but are generally not identical.

Examining the relationship between mercury and organic matter in lake sediments along a latitudinal transect in subarctic Canada

NASA Astrophysics Data System (ADS)

Galloway, Jennifer M.; Sanei, Hamed; Parsons, Michael; Swindles, Graeme T.; Macumber, Andrew L.; Patterson, R. Timothy; Palmer, Michael; Falck, Hendrik

2016-04-01

The accumulation of Hg in aquatic environments at both high and low latitudes can be controlled by organic matter through algal scavenging, thus complicating the interpretation of historical Hg profiles in lake sediments1,2,3. However, other recent studies suggest that algal scavenging is not important in governing Hg flux to sediments4, in some cases because of dilution by inorganic materials5. This study examines relationships between Hg and organic matter (OM) in over 100 lakes located between 60.5 and 65.4 °N and crossing the latitudinal tree-line in subarctic Canada. The latitudinal gradient approach in our study offers an opportunity to better understand climate and environmental controls on OM accumulation and its role in influencing Hg deposition in subarctic lacustrine environments. We used Rock Eval 6 pyrolysis to determine total organic carbon (TOC%), S1 (soluble OM consisting of degradable lipids and algal pigments), S2 (OM derived from highly aliphatic biomacromolecule structure of algal cell walls), and S3 (OM dominated by carbohydrates, lignins, and plant materials). Total Hg in sediments was measured using thermal decomposition, amalgamation, and atomic absorption spectrophotometry. In these lake sediments, S2 composes the majority of TOC (Pearson's r = 0.978, p<0.01) and is negatively correlated with latitude (r = -0.475, p<0.01). S1 and TOC are also negatively correlated with latitude (r = -0.237 and -0.452, respectively, p<0.01). These associations are interpreted to reflect less autochthonous OM production and proportionally higher allochthonous OM input to more northern lakes (oxygen index vs. latitude r = 0.371, p<0.01). Similar to previous studies1,2,3 Mercury displays a significant positive association with S1 (r = 0.556, p<0.01), S2 (r = 0.518, p<0.01), and TOC (r = 0.504, p<0.01),supporting the hypothesis that OM influences Hg accumulation in subarctic lake sediments. References 1Sanei, H., Goodarzi, F. 2006. Relationship between organic matter and mercury in recent lake sediment: the physical-geochemical aspects. Appl Geochem 21: 1900-12. 2Outridge, P.M., Sanei, H., Stern, G.A., Hamilton, P.B., Goodarzi, F. 2007. Evidence for control of mercury accumulation rates in Canadian high Arctic lake sediments by variations of aquatic primary productivity. Environ Sci Technol 41: 5259-65. 3Wu, F., Zu, L., Liao, H., Guo, F., Zhao, X., Giesy, J. 2013. Relationship between mercury and organic carbon in sediment cores from Lakes Qinghai and Chenghai, China. J Soils Sediments 13: 1084-1092.4Kirk, J.L., Muir, D.C.G., Antoniades, D., Douglas, M.S.V., Evans, M.S., Jackson, T.A., Kling, H., Lamoureux, S., Lim, D.S.S., Pienitz, R., Smol, J.P., Stewart, K., Wang, X., Yang, F. 2011. Response to comment on climate change and mercury accumulation in Canadian high and subarctic lakes. Environ Sci Technol 45: 6705-06.5Deison, R., Smol, J.P., Kokelj, S.V., Pisaric, M.F.J., Kimpe, L.E., Poulain, A.J., Sanei, H., Theinpoint, J.R., Blais, J.M. 2012. Spatial and temporal assessment of mercury and organic matter in thermokarst affected lakes of the Mackenzie Delta Uplands, NT, Canada. Environ Sci Tech 46: 8748-55.

A critical review on characterization strategies of organic matter for wastewater and water treatment processes.

PubMed

Tran, Ngoc Han; Ngo, Huu Hao; Urase, Taro; Gin, Karina Yew-Hoong

2015-10-01

The presence of organic matter (OM) in raw wastewater, treated wastewater effluents, and natural water samples has been known to cause many problems in wastewater treatment and water reclamation processes, such as treatability, membrane fouling, and the formation of potentially toxic by-products during wastewater treatment. This paper summarizes the current knowledge on the methods for characterization and quantification of OM in water samples in relation to wastewater and water treatment processes including: (i) characterization based on the biodegradability; (ii) characterization based on particle size distribution; (iii) fractionation based on the hydrophilic/hydrophobic properties; (iv) characterization based on the molecular weight (MW) size distribution; and (v) characterization based on fluorescence excitation emission matrix. In addition, the advantages, disadvantages and applications of these methods are discussed in detail. The establishment of correlations among biodegradability, hydrophobic/hydrophilic fractions, MW size distribution of OM, membrane fouling and formation of toxic by-products potential is highly recommended for further studies. Copyright © 2015 Elsevier Ltd. All rights reserved.

Dissolved total hydrolyzable enantiomeric amino acids in precipitation: Implications on bacterial contributions to atmospheric organic matter

NASA Astrophysics Data System (ADS)

Yan, Ge; Kim, Guebuem; Kim, Jeonghyun; Jeong, Yu-Sik; Kim, Young Il

2015-03-01

We analyzed dissolved organic carbon (DOC), dissolved organic nitrogen (DON), and dissolved enantiomeric amino acids in precipitation samples collected at two sites in Korea over a one-year period. The average concentrations of DOC, DON, and total hydrolyzable amino acids at Seoul (an inland urban area) were lower than those at Uljin (a coastal rural area). The different bulk compositions of dissolved organic matter (DOM) at these two sites (reflected by qualitative indicators) were mainly attributed to differences in contributing sources. The D-enantiomers of four individual amino acids (aspartic acid, glutamic acid, serine, and alanine) were ubiquitously present, with average enantiomeric (D/L) ratios of 0.34, 0.26, 0.21, and 0.61 for Seoul, and 0.18, 0.11, 0.09, and 0.31 for Uljin, respectively. The much higher D/L ratios observed at Seoul than at Uljin might result from more advanced diagenetic stages as well as higher contributions from bacteria inhabiting terrestrial environments. The C- and N-normalized yields of D-alanine in DOM of our samples were found to be comparable to literature values reported for aquatic systems, where a significant portion of DOM was suggested to be of bacterial origin. Our study suggests that bacteria and their remnants might constitute an important fraction of OM in the atmosphere, contributing significantly to the quality of atmospheric OM and its post-depositional bioavailability in the surface ecosystems.

Control of fossil-fuel particulate black carbon and organic matter, possibly the most effective method of slowing global warming

NASA Astrophysics Data System (ADS)

Jacobson, Mark Z.

2002-10-01

Under the 1997 Kyoto Protocol, no control of black carbon (BC) was considered. Here, it is found, through simulations in which 12 identifiable effects of aerosol particles on climate are treated, that any emission reduction of fossil-fuel (f.f.) particulate BC plus associated organic matter (OM) may slow global warming more than may any emission reduction of CO2 or CH4 for a specific period. When all f.f. BC + OM and anthropogenic CO2 and CH4 emissions are eliminated together, the period is 25-100 years. It is also estimated that historical net global warming can be attributed roughly to greenhouse gas plus f.f. BC + OM warming minus substantial cooling by other particles. Eliminating all f.f. BC + OM could eliminate 20-45% of net warming (8-18% of total warming before cooling is subtracted out) within 3-5 years if no other change occurred. Reducing CO2 emissions by a third would have the same effect, but after 50-200 years. Finally, diesel cars emitting continuously under the most recent U.S. and E.U. particulate standards (0.08 g/mi; 0.05 g/km) may warm climate per distance driven over the next 100+ years more than equivalent gasoline cars. Thus, fuel and carbon tax laws that favor diesel appear to promote global warming. Toughening vehicle particulate emission standards by a factor of 8 (0.01 g/mi; 0.006 g/km) does not change this conclusion, although it shortens the period over which diesel cars warm to 13-54 years. Although control of BC + OM can slow warming, control of greenhouse gases is necessary to stop warming. Reducing BC + OM will not only slow global warming but also improve human health.

Effects of organic matter on crystallization of struvite in biologically treated swine wastewater.

PubMed

Capdevielle, Aurélie; Sýkorová, Eva; Béline, Fabrice; Daumer, Marie-Line

2016-01-01

A sustainable way to recover phosphorus (P) in swine wastewater involves a preliminary step of P dissolution followed by the separation of particulate organic matter (OM). The next two steps are firstly the precipitation of struvite crystals done by adding a crystallization reagent (magnesia) and secondly the filtration of the crystals. To develop the process successfully at an industrial scale, the control of the mechanisms of precipitation is the key point in order to obtain high value-added products, that is, big struvite crystals easy to harvest and handle. Experiments with process parameters optimized previously in a synthetic swine wastewater were performed on real swine wastewater to assess the role of the OM on struvite crystallization. After 24 h, with a pH increase to 6.8 only, 90% of the initial P was precipitated and 60% was precipitated as struvite. 80% of the solid recovered was in the fraction > 100 µm. The other forms recovered were brushite, amorphous calcium phosphate, NaCl, KCl and OM. The influence of OM on struvite precipitation in acidified swine wastewater was negative on the reaction kinetics but positive on the size of the struvite crystals. The presence of colloidal particles increased the size of the struvite crystals but slowed down the kinetics due to the viscosity induced by the repulsive force of the colloids. The maximum size of single struvite crystals (200 µm) was observed with the presence of particulate OM.

Dairy manure applications and soil health implications

USDA-ARS?s Scientific Manuscript database

Dairy manure applications can potentially improve soil health by adding organic matter (OM) to the soil. However, intensive dairy manure applications can cause salt accumulations on arid, irrigated soils, impairing soil health, which can reduce crop growth and yield. Soil organic matter, a major c...

Seasonal and spatial variability of the organic matter-to-organic carbon mass ratios in Chinese urban organic aerosols and a first report of high correlations between aerosol oxalic acid and zinc

NASA Astrophysics Data System (ADS)

Xing, L.; Fu, T.-M.; Cao, J. J.; Lee, S. C.; Wang, G. H.; Ho, K. F.; Cheng, M.-C.; You, C.-F.; Wang, T. J.

2013-01-01

We calculated the organic matter to organic carbon mass ratios (OM/OC mass ratios) in PM2.5 collected from 14 Chinese cities during summer and winter of 2003 and analyzed the causes for their seasonal and spatial variability. The OM/OC mass ratios were calculated two ways. Using a mass balance method, the calculated OM/OC mass ratios averaged 1.92 ± 0.39 yr-round, with no significant seasonal or spatial variation. The second calculation was based on chemical species analyses of the organic compounds extracted from the PM2.5 samples using dichloromethane/methanol and water. The calculated OM/OC mass ratio in summer was relatively high (1.75 ± 0.13) and spatially-invariant, due to vigorous photochemistry and secondary OA production throughout the country. The calculated OM/OC mass ratio in winter (1.59 ± 0.18) was significantly lower than that in summer, with lower values in northern cities (1.51 ± 0.07) than in southern cities (1.65 ± 0.15). This likely reflects the wider usage of coal for heating purposes in northern China in winter, in contrast to the larger contributions from biofuel and biomass burning in southern China in winter. On average, organic matters constituted 36% and 34% of Chinese urban PM2.5 mass in summer and winter, respectively. We reported, for the first time, high correlations between Zn and oxalic acid in Chinese urban aerosols in summer. This is consistent with the formation of stable Zn oxalate complex in the aerosol phase previously proposed by Furukawa and Takahashi (2011). We found that many other dicarboxylic acids were also highly correlated with Zn in the summer Chinese urban aerosol samples, suggesting that they may also form stable organic complexes with Zn. Such formation may have profound implications for the atmospheric abundance and hygroscopic property of aerosol dicarboxylic acids.

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, workers discuss the next step in moving the orbital maneuvering system (OMS) pod behind them. The OMS pod will be installed on Atlantis. Two OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

NASA Image and Video Library

2003-10-30

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, workers discuss the next step in moving the orbital maneuvering system (OMS) pod behind them. The OMS pod will be installed on Atlantis. Two OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

Quantitative description of respiration processes in meso-eutrophic and eutrophic freshwater environments.

PubMed

Kiersztyn, Bartosz; Kauppinen, Elsi S; Kaliński, Tomasz; Chróst, Ryszard; Siuda, Waldemar

2018-06-01

We propose a modification of measurement methodology allowing the overall respiration rate (V Resp ) close to the in situ conditions; size of the labile, respirable organic matter pool (OM Resp ); and its turnover time (Tt) to be calculated. In addition to the respiration of dissolved substrates by free-living bacteria, the respiration of attached bacteria and other planktonic organisms is also taken into account. In case study we evaluated the modified, quantitative description of respiration processes in surface waters of lakes of different trophic status: mezzo-eutrophic and eutrophic. In both types of studied environments, V Resp oscillated between 1.0 μmol C l -1  h -1 and 3.0 μmol C l -1  h -1 , and the size of the OM Resp pool varied from 39.3 μM C to 828.7 μM C. Despite of higher OM Resp concentrations in eutrophic lakes, we found a lower susceptibility of OM to respiration processes in eutrophic than in meso-eutrophic lakes but similar V Resp in both types of lakes. We conclude that the proposed method allows a fast quantitative description of labile organic matter utilization by aerobic aquatic microorganisms. Copyright © 2018 Elsevier B.V. All rights reserved.

Sources, Ages, and Alteration of Organic Matter in Estuaries.

PubMed

Canuel, Elizabeth A; Hardison, Amber K

2016-01-01

Understanding the processes influencing the sources and fate of organic matter (OM) in estuaries is important for quantifying the contributions of carbon from land and rivers to the global carbon budget of the coastal ocean. Estuaries are sites of high OM production and processing, and understanding biogeochemical processes within these regions is key to quantifying organic carbon (Corg) budgets at the land-ocean margin. These regions provide vital ecological services, including nutrient filtration and protection from floods and storm surge, and provide habitat and nursery areas for numerous commercially important species. Human activities have modified estuarine systems over time, resulting in changes in the production, respiration, burial, and export of Corg. Corg in estuaries is derived from aquatic, terrigenous, and anthropogenic sources, with each source exhibiting a spectrum of ages and lability. The complex source and age characteristics of Corg in estuaries complicate our ability to trace OM along the river-estuary-coastal ocean continuum. This review focuses on the application of organic biomarkers and compound-specific isotope analyses to estuarine environments and on how these tools have enhanced our ability to discern natural sources of OM, trace their incorporation into food webs, and enhance understanding of the fate of Corg within estuaries and their adjacent waters.

Late Holocene stable carbon and nitrogen isotopic variation of bulk organic matter deposited in Blackwood Sinkhole, Abaco, The Bahamas

NASA Astrophysics Data System (ADS)

Tamalavage, A.; van Hengstum, P. J.; Louchouarn, P.; Fall, P. L.; Donnelly, J. P.

2015-12-01

In the modern climate of the Bahamas, a latitudinal precipitation gradient only allows Pine (Pinus caribaea var. bahamensis) dominated forests to exist on the more mesic (humid) northern islands (Abaco, Andros, New Providence, Grand Bahamas). Previous research suggests that the northern Bahamas underwent dramatic environmental changes in the late Holocene (e.g., waves of human arrival, shifts in terrestrial vegetation and animal extinctions). However, disentangling the timing and relative forcing (climatic vs. anthropogenic) of these changes has proven challenging without high-resolution terrestrial climate records. Recently, a late Holocene decadal to multi-decadal laminated sedimentary record was recovered from Blackwood Sinkhole, on Abaco Island. The bottom of the sinkhole is characterized by anoxic, saline groundwater, while the upper, brackish meteoric lens provides a habitat to fish, algae and other organisms. Here, we present δ13Corg and δ15Norg values of bulk organic matter (OM) taken every cm of the 110 cm core to help elucidate changes in the chemical composition of the source of OM reaching the anoxic sediments of the sinkhole. δ13Corg values change at 812 Cal yrs BP (2s: 931-681 Cal yrs BP, 31.7 cm depth) from -30.5 ± 1.6‰ in the lower 80 cm of the core to -27.6 ± 1.2‰ in the upper 30 cm. There is a synchronous change from more enriched δ15N values, 3.7 ± 1.1‰, in the lower portion of the core, to lower δ15N values (1.9 ± .5‰), in the upper portion of the core. A pollen-based reconstruction of terrestrial vegetation from the same core indicates that these isotopic shifts are concomitant with a shift from a dominance of Arecaceae (Palms) and tropical dry hardwoods below 30 cm, to Pinus and Conocarpus predominance above 30 cm. These results indicate that the source of sedimentary OM deposited into the sinkhole changed coherently with regional landscape change. Biomarker analyses will be used to further identify the role of autochthonous vs. allochthonous inputs of OM and hydrological residence time on sedimentary records of the Northern Bahamas in the late Holocene.

Early diagenesis of recently deposited organic matter: a 9-yr time-series study of a flood deposit

NASA Astrophysics Data System (ADS)

Tesi, T.; Goñi, M. A.; Langone, L.; Wheatcroft, R. A.; Miserocchi, S.; Bertotti, L.

2012-04-01

Because the preservation of organic carbon (OC) in river-dominated margins accounts for a significant fraction of OC burial in the ocean, biochemical studies must find novel ways to explicitly address the non-steadiness of these settings. In this study, we approached this issue by collecting event-beds soon after their emplacement (event-response sampling) and following their evolution with time (time-series analysis). In Fall 2000, the Po River (Italy) experienced a 100-yr return period flood that resulted in a thick deposit in the adjacent prodelta. Cores collected in the central prodelta after the flood event and over the following 9 years (8 sediment cores), allowed characterization of the event-strata in their initial state and documentation of their subsequent evolution. The characterization of sedimentary organic matter (OM) collected soon after the flood deposit emplacement and the description of its subsequent evolution with time provided extraordinary opportunity to investigate the reactivity of OM on a 9-yr time scale. Our analysis included the evaluation of the whole spectrum of CuO reaction products such as lignin phenols, p-hydroxy benzenes, benzoic acids, cutin-derived products, dicarboxylic acids, and fatty acids, as well as bulk organic carbon, nitrogen and carbon stable isotopes. Sedimentological characteristics were investigated using x-radiographs and sediment texture analyses whereas the evolution of sedimentary OM was evaluated via inventories of bulk elements and biomarkers. Remineralization of organic nitrogen and organic carbon occurred at similar rates (% change ~-17%) indicating that the overall elemental composition of sedimentary OM remained stable with time. This steadiness was confirmed by lack of temporal changes of the OC/TN ratio. Despite the steady OC/TN ratio, changes in δ13C revealed preferential loss of isotopically enriched organic material. Biomarker inventories indicated selective degradation during diagenesis, consistent with the reactivity spectrum observed in laboratory and field studies (% change from -~9 to -~60%). Among terrigenous biomarkers, lignin phenols were better preserved than hydroxy fatty acids derived from plant cuticles (% change ~-10 vs ~-50 %, respectively). Aromatic CuO reaction products, such as benzoic acids and p-hydroxy benzenes, were better preserved than lipid-derived biomarkers, especially for those compounds having a terrestrially-derived source. The largest part of dicarboxylic acids was derived from plant cuticles and exhibited reactivities coherent with cutin-derived products (% change ~-50%).

A 27cal ka biomarker-based record of ecosystem changes from lacustrine sediments of the Chihuahua Desert of Mexico

NASA Astrophysics Data System (ADS)

Chávez-Lara, C. M.; Holtvoeth, J.; Roy, P. D.; Pancost, R. D.

2018-07-01

Hydroclimate variation of the northwest Mexico during the late Pleistocene and Holocene is an active area of debate, with uncertainty in the nature and sources of precipitation. Previous research has inferred the influences of winter storms, summer monsoonal rain and autumn tropical cyclones. The impacts on regional and local ecosystems, however, are not well constrained. Here, we investigate the response of lacustrine and terrestrial habitats of the Santiaguillo Basin in the Chihuahua Desert (Mexico) to hydrological changes occurring since the late last glacial. Biomarkers from the sediments reflect variable input of organic matter (OM) from algal and bacterial biomass, aquatic microfauna and surrounding vegetation, revealing distinct stages of ecosystem adaption over the last 27 cal ka. Based on previously published and new data, we show that a perennial productive lake was present during the late glacial and it persisted until 17.5 cal ka BP. Coinciding with Heinrich event 1, OM supply from deteriorating wetland soils may have been caused by early dry conditions. Further phases of increasing aridity and a shrinking water body drove changing OM quality and biomarker composition during the early and mid-Holocene. A pronounced shift in biomarker distributions at 4 cal ka BP suggests that the supply of plant litter from resinous trees and grasses increased, likely reflecting the establishment of modern vegetation. Our results illustrate the potential of biomarker applications in the area, adding to the evidence of hydroclimate variability and enabling reconstructions of local ecosystem dynamics.

Soil fluoride fractions and their bioavailability to tea plants (Camellia sinensis L.).

PubMed

Yi, Xiaoyun; Qiao, Sha; Ma, Lifeng; Wang, Jie; Ruan, Jianyun

2017-10-01

Drinking teas containing high fluoride (F) imposes fluorosis risk. The soil F bioavailability is an important factor influencing its uptake and contents in teas. The present work was conducted to investigate F fractions in soil and their bioavailability to tea plants. Tea seedlings were cultivated on 6 typical soils treated with a mixture consisting of dolomite, lime, peat and KCl at variable rates in the pot experiment. Soils and young shoots were collected in pairs from 63 sites of 21 plantations in a field experiment. Soil fluoride was sequentially separated into hot water soluble [Formula: see text], exchangeable [Formula: see text] (by 1 mol L -1 MgCl 2 , pH = 7.0), F bound to Mn and Fe hydroxides [F (oxides,s) ], and organic matter [F (OM,s) ] or extracted independently by water [Formula: see text] or 0.01 mol L -1 CaCl 2 solution [Formula: see text]. Averaged [Formula: see text], [Formula: see text], F (oxides,s) and F (OM,s) accounted for 51, 14, 5 and 30 % of the total sequential extracts, respectively. There were significant correlations among [Formula: see text], [Formula: see text] and F (OM,s) . Fluoride contents in leaves correlated with [Formula: see text] (r = 0.71, p < 0.001), [Formula: see text] (r = 0.93, p < 0.001) and F (OM,s) (r = 0.69, p < 0.01) but not other fractions in the pot experiment and with [Formula: see text] (r = 0.43-0.57, p < 0.001) and [Formula: see text] (r = 0.42-0.79, p < 0.001) in the field experiment. It was concluded that 0.01 M CaCl 2 extractable fluoride can be a good indicator of soil F bioavailability to tea plants. The significant correlations among some of the F fractions suggested that F in solution, AlF complexes (AlF 2 + , AlF 2+ ) and those bound to organic matter likely represent the available pools to tea plants.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Herfort, Lydie; Peterson, Tawnya D.; McCue, Lee Ann

The Columbia River estuary is traditionally considered a detritus-based ecosystem fueled in summer by organic matter (OM) from expired freshwater diatoms. Since Estuarine Turbidity Maxima (ETM) are sites of accumulation and transformation of this phytoplankton-derived OM, to further characterize the ETM protist assemblage, we collected in August 2007 bottom waters throughout an ETM event, as well as surface water during the peak of bottom turbidity, and performed biogeochemical, microscopic and molecular (18S rRNA gene clone libraries) analyses. These data confirmed that the majority of the particulate OM in ETMs is derived from chlorophyll a-poor particulate organic carbon tagged by DNAmore » too damaged to be detected by molecular analysis.« less

Organic metamorphism in the California petroleum basins; Chapter A, Rock-Eval and vitrinite reflectance

USGS Publications Warehouse

Price, Leigh C.; Pawlewicz, Mark J.; Daws, Ted A.

1999-01-01

The results of ROCK-EVAL and vitrinite reflectance analyses of a large sample base from more than 70 wells located in three oil-rich California petroleum basins are reported. The cores from these wells have a wide range of present-day burial temperatures (40 ? to 220 ? C). The rocks in these basins were deposited under highly variable conditions, sometimes resulting in substantially different organic matter (OM) types in rocks tens of meters vertically apart from each other in one well. The kinetic response of these different OM types to equivalent wellknown burial histories is a pivotal point of this study. In the Los Angeles and Ventura Basins, rock organic-richness significantly increased with depth, as did kerogen hydrogen content, and the percentage of fine-grained versus coarsegrained rocks. The shales in these basins are perceived as containing primarily hydrogen-rich amorphous OM. In actuality, the shallowest 2,000 to 3,000 m of rocks in the basins, and at least the upper 6,000 m of rocks in parts of the Los Angeles Basin central syncline, are dominated by type III/IV OM. In the Los Angeles Basin, mainstage hydrocarbon (HC) generation commences in the type III/IV OM at present-day burial temperatures of 85 ? to 110 ? C, most likely around 100 ? C, and is largely complete by 220 ? C. In the Southern San Joaquin Valley Basin, mainstage HC generation commences in type III/IV OM at 150 ? C and is also largely complete by 220 ? C. In the Ventura Basin, mainstage HC generation commences above 140 ? C in type III/IV OM. The apparent lower temperatures for commencement of HC generation in the Los Angeles Basin are attributed to the fact that parts of the basin were cooled from maximal burial temperatures by increased meteoric water flows during the last glaciations. All aspects of organic metamorphism, including mainstage HC generation, are strongly suppressed in rocks with hydrogenrich OM in these basins. For example, ROCK-EVAL data suggest that mainstage HC generation has not commenced in rocks with hydrogen-rich OM at present-day temperatures of 198?C. This observation is attributed to much stronger bonds in hydrogen- rich OM compared to types III and IV OM and, therefore, significantly higher burial temperatures are required to break these bonds. This difference in OM kinetics has profound ramifications for petroleum-geochemical exploration models. Organic-matter characteristics inherited from original depositional conditions were overlaid on, and at times confused interpretation of, characteristics from organic metamorphism in all study areas. In all the basins examined in this study, immature fine-grained rocks occasionally had high to very high carbon-normalized concentrations of pre-generation indigenous bitumen. This unusual characteristic may be due to unique depositional conditions in these basins.

Small-scale variability in geomorphological settings influences mangrove-derived organic matter export in a tropical bay

NASA Astrophysics Data System (ADS)

Signa, Geraldina; Mazzola, Antonio; Kairo, James; Vizzini, Salvatrice

2017-02-01

Organic matter (OM) exchanges between adjacent habitats affect the dynamics and functioning of coastal systems, as well as the role of the different primary producers as energy and nutrient sources in food webs. Elemental (C, N, C : N) and isotope (δ13C) signatures and fatty acid (FA) profiles were used to assess the influence of geomorphological setting in two climatic seasons on the export and fate of mangrove OM across a tidally influenced tropical area, Gazi Bay (Kenya). The main results indicate that tidal transport, along with riverine runoff, plays a significant role in the distribution of mangrove organic matter. In particular, a marked spatial variability in the export of organic matter from mangroves to adjacent habitats was due to the different settings of the creeks flowing into the bay. Kinondo Creek acted as a mangrove retention site, where export of mangrove material was limited to the contiguous intertidal area, while Kidogoweni Creek acted as a flow-through system, from which mangrove material spreads into the bay, especially in the rainy season. This pattern was evident from the isotopic signature of primary producers, which were more 13C-depleted in the Kinondo Creek and nearby, due to the lower dilution of the dissolved inorganic carbon (DIC) pool, typically depleted as an effect of intense mangrove mineralisation. Despite the trapping efficiency of the seagrass canopy, suspended particulate OM showed the important contribution of mangroves across the whole bay, up to the coral reef, as an effect of the strong ebb tide. Overall, mixing model outcomes indicated a widespread mixed contribution of both allochthonous and autochthonous OM sources across Gazi Bay. Moreover, FAs indicated a notable contribution of brown macroalgae and bacteria in both sediment and suspended pools. These results suggest that ecological connectivity in Gazi Bay is strongly influenced by geomorphological setting, which may have far-reaching consequences for the functioning of the whole ecosystem and the local food webs.

Black Nitrogen or Plant-Derived Organic Nitrogen - which Form is More Efficiently Sequestered in Soils?

NASA Astrophysics Data System (ADS)

López-Martín, María; Velasco-Molina, Marta; Knicker, Heike

2014-05-01

Input of charcoal after forest fires can lead to considerable changes of the quality and quantity of organic matter in soils (SOM). This affects not only its organic C pool but also shifts its organic N composition from peptideous to N-heterocyclic structures (Knicker et al., 1996). In the present study we sought to understand how this alteration is affecting the N availability in fire affected soils. Therefore, we performed a medium-term pot experiment in which grass material (Lolium perenne) was grown on soil material (Cambisols) of a fire-affected and a fire-unaffected forest. The soils were topped with mixtures of ground fresh grass residues and KNO3 or charred grass material (pyrogenic organic matter; PyOM) with KNO3. Here, either the organic N or the inorganic N was isotopically enriched with 15N. Following the 15N concentration in the soil matrix and the growing plants as a function of incubation time (up to 16 months) by isotopic ratio mass spectrometry allowed us to indentify which N-source is most efficiently stabilized and how PyOM is affecting this process. Preliminary data indicated that only after the germination of the seeds, the concentration of the added inorganic 15N in the soil decreased considerably most likely due to its uptake by the growing plants but also due to N-losses by leaching and volatilization. Additional addition of plant residues or PyOM had no major effect on this behavior. Covering the soil with 15N-grass residues which simulates a litter layer led to a slow increase of the 15N concentration in the mineral soil during the first month. This is best explained by the ongoing incorporation of the litter into the soil matrix. After that a small decrease was observed, showing that the organic N was only slowly mobilized. Addition of 15N-PyOM showed a comparable behavior but with 15N concentration in the soil corresponding to twice of those of the pots amended with 15N-grass residues. After that the 15N concentrations decrease quickly and approached those of the pots with fresh grass litter supporting the mobilization of black nitrogen and its uptake by plants. Our results point to the suggestion that N in PyOM and humified SOM have comparable biochemical stability. In order to test this hypothesis, a further experiment was set up mixtures of soil and humified 15N grass residues or aged 15N grass char to which fresh PyOM or fresh grass residues, respectively, were added. In addition solid-state 15N NMR spectroscopy was applied to disclose the nature of the sequestered N. REFERENCES Knicker, H., Almendros, G., González-Vila, F.J., Martín, F., Lüdemann, H.-D., 1996. 13C- and 15N-NMR spectroscopic examination of the transformation of organic nitrogen in plant biomass during thermal treatment. Soil Biology and Biochemistry, 28, 1053-1060.

Characterizing the Nature and Distribution of Phytolith Organic Matter Using Raman Spectroscopy

NASA Astrophysics Data System (ADS)

Gallagher, K. L.; Alfonso-Garcia, A.; Sanchez, J.; Harutyunyan, A.; Santos, G.; Potma, E.

2014-12-01

Many plants, including grasses and some important human food sources, accumulate and precipitate silica in their cells to form opaline phytoliths. These phytoliths contain small amounts of organic matter (OM) that is trapped during the process of silicification and protected from oxidation. If this OM is derived solely from photosynthesis during the life of the plant, it should preserve an isotopic signature of the atmosphere and the type of photosynthetic pathway [1]. However, radiocarbon dating of this OM gives an older age than expected [2], and studies on modern plants indicate a soil contribution to phytolith OM [3,4]. Thus, a better understanding of the role of phytolith OM and the silica precipitation mechanism is needed. Previous work has suggested that plant silica is associated with compounds such as proteins, lipids, lignin and phenol-carbohydrate complexes [5-7]. It is not known whether these compounds are cellular components passively encapsulated as the cell silicified, polymers actively involved in the precipitation process or random compounds assimilated by the plant and discarded into a "glass wastebasket". Here, we used Raman spectroscopy to map individual phytoliths isolated from Sorghum bicolor plants. We showed that OM in phytoliths is heterogeneously distributed and not related to optical features (i.e. dark spots or holes visible in light microscopy) commonly thought to be the repository for phytolith OM (corroborated by nanoSIMS [8]). The Raman spectra showed peaks at 2970-2960, 2945, and 2906 cm-1, indicative of C-H stretching modes, and further peaks at 1600, 1440, 1410, and 1350 cm-1 consistent with lignins and other OM. These peaks exhibited variability of relative intensities both within and between phytoliths. We will discuss these findings in the context of silica biomineralization in plants, mechanistic implications, and isotopic paleo-reconstructions using phytolith OM. 1. Jones, R.L. and A. Beavers, Soil Sci., 1963. 96(6): 375. 2. Santos, G.M., et al., Biogeosci. , 2012. 9(5): 1873. 3. Ryerson, P. et al, in prep. 4. Gallagher, K.L. et al, in prep. 5. Elbaum, R., et al., Quat. Int., 2009. 193:11. 6. Inanaga, S., et al., Soil Sci. and Plant Nut., 1995. 41:111. 7. Zhang, C.C., et al., Plant Soil, 2013. 372(1-2): 137. 8. Alexandre, et al., submitted.

Ethics education: a priority for general practitioners in occupational medicine.

PubMed

Alavi, S Shohreh; Makarem, Jalil; Mehrdad, Ramin

2015-01-01

General practitioners (GPs) who work in occupational medicine (OM) should be trained continuously. However, it seems that ethical issues have been neglected. This cross-sectional study aimed to determine educational priorities for GPs working in OM. A total of 410 GPs who participated in OM seminars were asked to answer a number of questions related to items that they usually come across in their work. The respondents were given scores on 15 items, which pertained to their frequency of experience in OM, their felt needs regarding education in the field, and their knowledge and skills. Ethical issues were the most frequently utilised item and the area in which the felt need for education was the greatest. The knowledge of and skills in ethical issues and matters were the poorest. Ethical principles and confidentiality had the highest calculated educational priority scores. It is necessary to consider ethical issues as an educational priority for GPs working in the field of OM.

Estuarine consumers utilize marine, estuarine and terrestrial organic matter and provide connectivity among these food webs

EPA Science Inventory

The flux of organic matter (OM) across ecosystem boundaries can influence estuarine food web dynamics and productivity. However, this process is seldom investigated taking into account all the adjacent ecosystems (e.g. ocean, river, land) and different hydrological settings (i.e....

Assessment of herbicide sorption by biochars and organic matter associated with soil and sediment

USDA-ARS?s Scientific Manuscript database

Sorption of two herbicides, fluridone (FLUN) and norflurazon (NORO), by whole sediment, two types of biochars and various soil/sediment organic matter (OM) fractions including nonhydrolyzable carbon (NHC), black carbon (BC) and humic acid (HA) was examined. The single-point organic carbon (OC)-norma...

Sedimentary organic matter in two Spitsbergen fjords: Terrestrial and marine contributions based on carbon and nitrogen contents and stable isotopes composition

NASA Astrophysics Data System (ADS)

Koziorowska, Katarzyna; Kuliński, Karol; Pempkowiak, Janusz

2016-02-01

The aim of this study was to estimate the spatial variability of organic carbon (Corg) and total nitrogen (Ntot) concentrations, Corg/Ntot ratios, stable isotopes of carbon and nitrogen (δ13Corg, δ15Ntot) and the proportions of autochthonous and allochtonous organic matter within recently deposited sediments of two Spitsbergen fjords: the Hornsund and the Adventfjord, which are affected to a different degree by the West Spitsbergen Current. Corg concentrations ranged from 1.38% to 1.98% in the Hornsund and from 1.73% to 3.85% in the Adventfjord. In both fjords the highest Corg concentrations were measured at the innermost stations and they decreased towards the mouths of the fjords. This suggests fresh water runoff to be an important source of organic matter (OM) for surface sediments. The results showed that both fjords differ significantly in terms of sedimentary organic matter characteristics. The samples from the Hornsund, except those from the innermost station in the Brepollen, had relatively low Corg/Ntot ratios, all within a narrow range (from 9.7 to 11.3). On the other hand significantly higher Corg/Ntot ratios, varying within a broad range (from 14.6 to 33.0), were measured in the Adventfjord. The samples from the Hornsund were characterized by higher δ13Corg (from -24.90‰ to -23.87‰) and δ15Ntot (from 3.02‰ to 4.93‰) than those from the Adventfjord (-25.94‰ to -24.69‰ and from 0.71‰ to 4.00‰, respectively). This is attributed to a larger proportion of marine organic matter. Using the two end-member approach proportions of terrestrial organic matter were evaluated. Terrestrial OM contribution for the Adventfjord was in the range of 82-83%, while in case of the Hornsund the results were in the range of 69-75%, with the exception of the innermost part of the fjord, where terrestrial organic matter contribution ranged from 80 to 82%. The strong positive correlation between δ13Corg and δ15Ntot was revealed. This was taken as an indicator that fresh, labile organic matter is the base of the trophic pyramid. The conclusion regarding a more complex food web in the Horsund, based on larger δ15Ntot values, is further substantiated by the larger proportion of autochthonous, labile organic matter found in the Hornsund's sediments.

Survival and reproduction of enchytraeid worms, Oligochaeta, in different soil types amended with energetic cyclic nitramines.

PubMed

Dodard, Sabine G; Sunahara, Geoffrey I; Kuperman, Roman G; Sarrazin, Manon; Gong, Ping; Ampleman, Guy; Thiboutot, Sonia; Hawari, Jalal

2005-10-01

Hexanitrohexaazaisowurtzitane (CL-20), a new polycyclic polynitramine, has the same functional nitramine groups (N-NO2) as the widely used energetic chemicals hexahydro-1,3,5-trinitro-1,3,5-triazacyclohexane (royal demolition explosive [RDX]) and octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine (high-melting explosive [HMX]). Potential impacts of CL-20 as an emerging contaminant must be assessed before its use. The effects of CL-20, RDX, or HMX on adult survival and juvenile production by potworms Enchytraeus albidus and Enchytraeus crypticus were studied in three soil types, including Sassafras sandy loam (1.2% organic matter [OM], 11% clay, pH 5.5), an agricultural soil (42% OM, 1% clay, pH 8.2), and a composite agricultural-forest soil (23% OM, 2% clay, pH 7.9) by using ISO method 16387 (International Standard Organization, Geneva, Switzerland). Results showed that CL-20 was toxic to E. crypticus with median lethal concentration values for adult survival ranging from 0.1 to 0.7 mg/kg dry mass (DM) when using the three tested soils. In addition, CL-20 adversely affected juvenile production by both species in all soils tested, with median effective concentration (EC50) values ranging from 0.08 to 0.62 mg/kg DM. Enchytraeus crypticus and E. albidus were similarly sensitive to CL-20 exposure in the composite agricultural-forest soil, which supported reproduction by both species and enabled comparisons. Correlation analysis showed weak or no relationship overall among the soil properties and reproduction toxicity endpoints. Neither RDX nor HMX affected (p > 0.05) adult survival of either species below 658 and 918 mg/kg DM, respectively, indicating that CL-20 is more toxic to enchytraeids than RDX or HMX. Examination of data shows that CL-20 should be considered as a potential reproductive toxicant to soil invertebrates, and that safeguards should be considered to minimize the potential for release of CL-20 into the environment.

Weight gain in mice on a high caloric diet and chronically treated with omeprazole depends on sex and genetic background

PubMed Central

Tsao, Amy C.; Gillilland, Merritt G.; Merchant, Juanita L.

2016-01-01

The impact of omeprazole (OM), a widely used over-the-counter proton pump inhibitor, on weight gain has not been extensively explored. We examined what factors, e.g., diet composition, microbiota, genetic strain, and sex, might affect weight gain in mice fed a high caloric diet while on OM. Inbred C57BL/6J strain, a 50:50 hybrid (B6SJLF1/J) strain, and mice on a highly mixed genetic background were fed four diets: standard chow (STD, 6% fat), STD with 200 ppm OM (STD + O), a high-energy chow (HiE, 11% fat), and HiE chow with OM (HiE + O) for 17 wk. Metabolic analysis, body composition, and fecal microbiota composition were analyzed in C57BL/6J mice. Oral glucose tolerance tests were performed using mice on the mixed background. After 8 wk, female and male C57BL/6J mice on the HiE diets ate less, whereas males on the HiE diets compared with the STD diets gained weight. All diet treatments reduced energy expenditure in females but in males only those on the HiE + O diet. Gut microbiota composition differed in the C57BL/6J females but not the males. Hybrid B6SJLF1/J mice showed similar weight gain on all test diets. In contrast, mixed strain male mice fed a HiE + O diet gained ∼40% more weight than females on the same diet. In addition to increased weight gain, mixed genetic mice on the HiE + O diet cleared glucose normally but secreted more insulin. We concluded that sex and genetic background define weight gain and metabolic responses of mice on high caloric diets and OM. PMID:27810953

Soil Organic Matter and Soil Productivity: Searching for the Missing Link

Treesearch

Felipe G. Sanchez

1998-01-01

Soil-organic matter (SOM) is a complex array of components including soil fauna and flora at different stages of decomposition (Berg et al., 1982). Its concentration in soils can vary from 0.5% in mineral soils to almost 100% in peat soils (Brady, 1974). Organic matter (OM) in the surface mineral soil is considered a major determinant of forest ecosystem productivity...

Production of glutaminase(E.C. 3.2.1.5) from Zygosaccharomyces rouxii in solid-state fermentation and modeling the growth of Z. rouxii therein.

PubMed

Iyer, Padma; Singhal, Rekha S

2010-04-01

Glutaminase production in Zygosacchromyces rouxii by solid-state fermentation (SSF) is detailed. Substrates screening showed best results with oatmeal (OM) and wheatbran (WB). Further, a 1:1 combination of OM: WB gave 0.614units/gds with artificial sea water (ASW) as moistening agent. Evaluation of additional carbon, nitrogen, aminoacids and minerals supplementation was done. A central composite design was employed to investigate effects of four variables, viz. moisture content, glucose, corn steep liquor and glutamine on production. A 4-fold increase in enzyme production was obtained. Studies were undertaken to analyze the time course model the microbial growth and nutrient utilization during SSF. Logistic equation (R2=0.8973), describing the growth model of Z.rouxii was obtained, with maximum values of micronm and Xm at 0.326h-1 and 7.35% of dry matter weight loss, respectively. A good-fit model to describe utilization of total carbohydrate (R2=0.9906) nitrogen concentration (R2=0.9869) with time was obtained. The model was used successfully to predict enzyme production (R2=0.7950).

Properties and reactivity of Fe-organic matter associations formed by coprecipitation versus adsorption: Clues from arsenate batch adsorption

NASA Astrophysics Data System (ADS)

Mikutta, Robert; Lorenz, Dennis; Guggenberger, Georg; Haumaier, Ludwig; Freund, Anja

2014-11-01

Ferric oxyhydroxides play an important role in controlling the bioavailability of oxyanions such as arsenate and phosphate in soil. Despite this, little is known about the properties and reactivity of Fe(III)-organic matter phases derived from adsorption (reaction of organic matter (OM) to post-synthesis Fe oxide) versus coprecipitation (formation of Fe oxides in presence of OM). Coprecipitates and adsorption complexes were synthesized at pH 4 using two natural organic matter (NOM) types extracted from forest floor layers (Oi and Oa horizon) of a Haplic Podzol. Iron(III) coprecipitates were formed at initial molar metal-to-carbon (M/C) ratios of 1.0 and 0.1 and an aluminum (Al)-to-Fe(III) ratio of 0.2. Sample properties were studied by X-ray diffraction, X-ray photoelectron spectroscopy (XPS), N2 gas adsorption, dynamic light scattering, and electrophoretic mobility measurements. Arsenic [As(V)] adsorption to Fe-OM phases was studied in batch experiments (168 h, pH 4, 100 μM As). The organic carbon (OC) contents of the coprecipitates (82-339 mg g-1) were higher than those of adsorption complexes (31 and 36 mg g-1), leading to pronounced variations in specific surface area (9-300 m2 g-1), average pore radii (1-9 nm), and total pore volumes (11-374 mm3 g-1) but being independent of the NOM type or the presence of Al. The occlusion of Fe solids by OM (XPS surface concentrations: 60-82 atom% C) caused comparable pHPZC (1.5-2) of adsorption complexes and coprecipitates. The synthesis conditions resulted in different Fe-OM association modes: Fe oxide particles in 'M/C 0.1' coprecipitates covered to a larger extent the outermost aggregate surfaces, for some 'M/C 1.0' coprecipitates OM effectively enveloped the Fe oxides, while OM in the adsorption complexes primarily covered the outer aggregate surfaces. Despite of their larger OC contents, adsorption of As(V) was fastest to coprecipitates formed at low Fe availability (M/C 0.1) and facilitated by desorption of weakly bonded OC and disaggregation. In contrast, 'M/C 1.0' coprecipitates showed a comparable rate of As uptake as the adsorption complexes. While small mesopores (2-10 nm) promoted the fast As uptake particularly to 'M/C 0.1' coprecipitates, the presence of micropores (<2 nm) appeared to impair As desorption. This study shows that the environmental reactivity of poorly crystalline Fe(III) oxides in terrestrial and aquatic systems can largely vary depending on the formation conditions. Carbon-rich Fe phases precipitated at low M/C ratios may play a more important role in oxyanion immobilization and Fe and C cycling than phases formed at higher M/C ratios or respective adsorption complexes.

Potential effect of fiddler crabs on organic matter distribution: A combined laboratory and field experimental approach

NASA Astrophysics Data System (ADS)

Natálio, Luís F.; Pardo, Juan C. F.; Machado, Glauco B. O.; Fortuna, Monique D.; Gallo, Deborah G.; Costa, Tânia M.

2017-01-01

Bioturbators play a key role in estuarine environments by modifying the availability of soil elements, which in turn may affect other organisms. Despite the importance of bioturbators, few studies have combined both field and laboratory experiments to explore the effects of bioturbators on estuarine soils. Herein, we assessed the bioturbation potential of fiddler crabs Leptuca leptodactyla and Leptuca uruguayensis in laboratory and field experiments, respectively. We evaluated whether the presence of fiddler crabs resulted in vertical transport of sediment, thereby altering organic matter (OM) distribution. Under laboratory conditions, the burrowing activity by L. leptodactyla increased the OM content in sediment surface. In the long-term field experiment with areas of inclusion and exclusion of L. uruguayensis, we did not observe influence of this fiddler crab in the vertical distribution of OM. Based on our results, we suggest that small fiddler crabs, such as the species used in these experiments, are potentially capable of alter their environment by transporting sediment and OM but such effects may be masked by environmental drivers and spatial heterogeneity under natural conditions. This phenomenon may be related to the small size of these species, which affects how much sediment is transported, along with the way OM interacts with biogeochemical and physical processes. Therefore, the net effect of these burrowing organisms is likely to be the result of a complex interaction with other environmental factors. In this sense, we highlight the importance of performing simultaneous field and laboratory experiments in order to better understanding the role of burrowing animals as bioturbators.

Quantification of Organic Porosity and Water Accessibility in Marcellus Shale Using Neutron Scattering

DOE PAGES

Gu, Xin; Mildner, David F. R.; Cole, David R.; ...

2016-04-28

Pores within organic matter (OM) are a significant contributor to the total pore system in gas shales. These pores contribute most of the storage capacity in gas shales. Here we present a novel approach to characterize the OM pore structure (including the porosity, specific surface area, pore size distribution, and water accessibility) in Marcellus shale. By using ultrasmall and small-angle neutron scattering, and by exploiting the contrast matching of the shale matrix with suitable mixtures of deuterated and protonated water, both total and water-accessible porosity were measured on centimeter-sized samples from two boreholes from the nanometer to micrometer scale withmore » good statistical coverage. Samples were also measured after combustion at 450 °C. Analysis of scattering data from these procedures allowed quantification of OM porosity and water accessibility. OM hosts 24–47% of the total porosity for both organic-rich and -poor samples. This porosity occupies as much as 29% of the OM volume. In contrast to the current paradigm in the literature that OM porosity is organophilic and therefore not likely to contain water, our results demonstrate that OM pores with widths >20 nm exhibit the characteristics of water accessibility. In conclusion, our approach reveals the complex structure and wetting behavior of the OM porosity at scales that are hard to interrogate using other techniques.« less

Quantification of Organic Porosity and Water Accessibility in Marcellus Shale Using Neutron Scattering

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gu, Xin; Mildner, David F. R.; Cole, David R.

Pores within organic matter (OM) are a significant contributor to the total pore system in gas shales. These pores contribute most of the storage capacity in gas shales. Here we present a novel approach to characterize the OM pore structure (including the porosity, specific surface area, pore size distribution, and water accessibility) in Marcellus shale. By using ultrasmall and small-angle neutron scattering, and by exploiting the contrast matching of the shale matrix with suitable mixtures of deuterated and protonated water, both total and water-accessible porosity were measured on centimeter-sized samples from two boreholes from the nanometer to micrometer scale withmore » good statistical coverage. Samples were also measured after combustion at 450 °C. Analysis of scattering data from these procedures allowed quantification of OM porosity and water accessibility. OM hosts 24–47% of the total porosity for both organic-rich and -poor samples. This porosity occupies as much as 29% of the OM volume. In contrast to the current paradigm in the literature that OM porosity is organophilic and therefore not likely to contain water, our results demonstrate that OM pores with widths >20 nm exhibit the characteristics of water accessibility. In conclusion, our approach reveals the complex structure and wetting behavior of the OM porosity at scales that are hard to interrogate using other techniques.« less

Global-change effects on early-stage decomposition processes in tidal wetlands - implications from a global survey using standardized litter

NASA Astrophysics Data System (ADS)

Mueller, Peter; Schile-Beers, Lisa M.; Mozdzer, Thomas J.; Chmura, Gail L.; Dinter, Thomas; Kuzyakov, Yakov; de Groot, Alma V.; Esselink, Peter; Smit, Christian; D'Alpaos, Andrea; Ibáñez, Carles; Lazarus, Magdalena; Neumeier, Urs; Johnson, Beverly J.; Baldwin, Andrew H.; Yarwood, Stephanie A.; Montemayor, Diana I.; Yang, Zaichao; Wu, Jihua; Jensen, Kai; Nolte, Stefanie

2018-05-01

Tidal wetlands, such as tidal marshes and mangroves, are hotspots for carbon sequestration. The preservation of organic matter (OM) is a critical process by which tidal wetlands exert influence over the global carbon cycle and at the same time gain elevation to keep pace with sea-level rise (SLR). The present study assessed the effects of temperature and relative sea level on the decomposition rate and stabilization of OM in tidal wetlands worldwide, utilizing commercially available standardized litter. While effects on decomposition rate per se were minor, we show strong negative effects of temperature and relative sea level on stabilization, as based on the fraction of labile, rapidly hydrolyzable OM that becomes stabilized during deployment. Across study sites, OM stabilization was 29 % lower in low, more frequently flooded vs. high, less frequently flooded zones. Stabilization declined by ˜ 75 % over the studied temperature gradient from 10.9 to 28.5 °C. Additionally, data from the Plum Island long-term ecological research site in Massachusetts, USA, show a pronounced reduction in OM stabilization by > 70 % in response to simulated coastal eutrophication, confirming the potentially high sensitivity of OM stabilization to global change. We therefore provide evidence that rising temperature, accelerated SLR, and coastal eutrophication may decrease the future capacity of tidal wetlands to sequester carbon by affecting the initial transformations of recent OM inputs to soil OM.

Integrating seawater desalination and wastewater reclamation forward osmosis process using thin-film composite mixed matrix membrane with functionalized carbon nanotube blended polyethersulfone support layer.

PubMed

Choi, Hyeon-Gyu; Son, Moon; Choi, Heechul

2017-10-01

Thin-film composite mixed matrix membrane (TFC MMM) with functionalized carbon nanotube (fCNT) blended in polyethersulfone (PES) support layer was synthesized via interfacial polymerization and phase inversion. This membrane was firstly tested in lab-scale integrating seawater desalination and wastewater reclamation forward osmosis (FO) process. Water flux of TFC MMM was increased by 72% compared to that of TFC membrane due to enhanced hydrophilicity. Although TFC MMM showed lower water flux than TFC commercial membrane, enhanced reverse salt flux selectivity (RSFS) of TFC MMM was observed compared to TFC membrane (15% higher) and TFC commercial membrane (4% higher), representing membrane permselectivity. Under effluent organic matter (EfOM) fouling test, 16% less normalized flux decline of TFC MMM was observed compared to TFC membrane. There was 8% less decline of TFC MMM compared to TFC commercial membrane due to fCNT effect on repulsive foulant-membrane interaction enhancement, caused by negatively charged membrane surface. After 10 min physical cleaning, TFC MMM displayed higher recovered normalized flux than TFC membrane (6%) and TFC commercial membrane (4%); this was also supported by visualized characterization of fouling layer. This study presents application of TFC MMM to integrated seawater desalination and wastewater reclamation FO process for the first time. It can be concluded that EfOM fouling of TFC MMM was suppressed due to repulsive foulant-membrane interaction. Copyright © 2017 Elsevier Ltd. All rights reserved.

Estimation of different source contributions to sediment organic matter in an agricultural-forested watershed using end member mixing analyses based on stable isotope ratios and fluorescence spectroscopy.

PubMed

Derrien, Morgane; Kim, Min-Seob; Ock, Giyoung; Hong, Seongjin; Cho, Jinwoo; Shin, Kyung-Hoon; Hur, Jin

2018-03-15

The two popular source tracing tools of stable isotope ratios (δ 13 C and δ 15 N) and fluorescence spectroscopy were used to estimate the relative source contributions to sediment organic matter (SeOM) at five different river sites in an agricultural-forested watershed (Soyang Lake watershed), and their capabilities for the source assignment were compared. Bulk sediments were used for the stable isotopes, while alkaline extractable organic matter (AEOM) from sediments was used to obtain fluorescent indices for SeOM. Several source discrimination indices were fully compiled for a range of the SeOM sources distributed in the catchments of the watershed, which included soils, forest leaves, crop (C3 and C4) and riparian plants, periphyton, and organic fertilizers. The relative source contributions to the river sediment samples were estimated via end member mixing analysis (EMMA) based on several selected discrimination indices. The EMMA based on the isotopes demonstrated that all sediments were characterized by a medium to a high contribution of periphyton ranging from ~30% to 70% except for one site heavily affected by forest and agricultural fields with relatively high contributions of terrestrial materials. The EMMA based on fluorescence parameters, however, did not show similar results with low contributions from forest leaf and periphyton. The characteristics of the studied watershed were more consistent with the source contributions determined by the isotope ratios. The discrepancy in the EMMA capability for source assignments between the two analytical tools can be explained by the limited analytical window of fluorescence spectroscopy for non-fluorescent dissolved organic matter (FDOM) and the inability of AEOM to represent original bulk particulate organic matter (POM). Copyright © 2017 Elsevier B.V. All rights reserved.

Evolution and Termination of Oceanic Anoxic Event 2: Testing the impact of organic matter sulfurization on benthic-pelagic coupling during OAE2

NASA Astrophysics Data System (ADS)

Hülse, D.; Arndt, S.; Ridgwell, A.

2016-12-01

Oceanic Anoxic Events (OAEs) represent severe disturbances of the global carbon, oxygen and nutrient cycles of the ocean. The archetypal example is OAE2 ( 93.5 Ma), which is characterized by widespread bottom water anoxia and photic zone euxinia. One way to explain these conditions is via increased oxygen demand in the water column resulting from enhanced primary productivity (PP), itself fuelled by increased nutrient availability for instance from the sediments as the burial efficiency of phosphorus declines when bottom waters become anoxic. The recovery from OAE like conditions is thought to involve the permanent removal of excess CO2 from the atmosphere and ocean by burying carbon in the form of organic matter (OM) in marine sediments, which is consistent with the geological record of widespread black shale formation. A number of possible controls on enhanced OM burial have previously been proposed and assessed, such as elevated depositional fluxes, higher clay mineral availability, or reduced oxygenation. Here we explore a 4th possible mechanism - organic matter sulfurization. During sulfurization, reduced inorganic sulfur species (e.g. H2S) react with OM, resulting in the formation of organic sulfur compounds which are less prone to bacterial degradation. Although studies indicate the global significance of this process for OAE2, its implications on Cretaceous benthic-pelagic coupling and thus OAE2 evolution and recovery has not yet been quantified and tested with a 3D Earth system model. The major hurdle is the high computational cost of simulating the essential redox reactions in marine sediments, which are critical to quantify the burial of OM and benthic recycling fluxes of chemical compounds. In order to close this knowledge gap, we developed a new, mechanistic representation of OM preservation in marine sediments (OMEN-SED) and coupled it to a 3D Earth system model (cGENIE). Using this new model we explore the impact of organic matter sulfurization on benthic nutrient fluxes, ocean oxygenation and PP during OAE2 for the first time in a fully coupled 3D-ocean-sediment model. We investigate the role of sulfurization in Earth's recovery dynamics from OAE2 by comparing our results with multiple geochemical proxies for seafloor anoxia and photic zone euxinia.

Investigating organic matter in Fanno Creek, Oregon, Part 2 of 3: sources, sinks, and transport of organic matter with fine sediment

USGS Publications Warehouse

Keith, Mackenzie K.; Sobieszczyk, Steven; Goldman, Jami H.; Rounds, Stewart A.

2014-01-01

Organic matter (OM) is abundant in Fanno Creek, Oregon, USA, and has been tied to a variety of water-quality concerns, including periods of low dissolved oxygen downstream in the Tualatin River, Oregon. The key sources of OM in Fanno Creek and other Tualatin River tributaries have not been fully identified, although isotopic analyses from previous studies indicated a predominantly terrestrial source. This study investigates the role of fine sediment erosion and deposition (mechanisms and spatial patterns) in relation to OM transport. Geomorphic mapping within the Fanno Creek floodplain shows that a large portion (approximately 70%) of the banks are eroding or subject to erosion, likely as a result of the imbalance caused by anthropogenic alteration. Field measurements of long- and short-term bank erosion average 4.2 cm/year and average measurements of deposition for the watershed are 4.8 cm/year. The balance between average annual erosion and deposition indicates an export of 3,250 metric tons (tonnes, t) of fine sediment to the Tualatin River—about twice the average annual export of 1,880 t of sediment at a location 2.4 km from the creek’s mouth calculated from suspended sediment load regressions from continuous turbidity data and suspended sediment samples. Carbon content from field samples of bank material, combined with fine sediment export rates, indicates that about 29–67 t of carbon, or about 49–116 t of OM, from bank sediment may be exported to the Tualatin River from Fanno Creek annually, an estimate that is a lower bound because it does not account for the mass wasting of organic-rich O and A soil horizons that enter the stream.

Investigating organic matter in Fanno Creek, Oregon, Part 2 of 3: Sources, sinks, and transport of organic matter with fine sediment

NASA Astrophysics Data System (ADS)

Keith, Mackenzie K.; Sobieszczyk, Steven; Goldman, Jami H.; Rounds, Stewart A.

2014-11-01

Organic matter (OM) is abundant in Fanno Creek, Oregon, USA, and has been tied to a variety of water-quality concerns, including periods of low dissolved oxygen downstream in the Tualatin River, Oregon. The key sources of OM in Fanno Creek and other Tualatin River tributaries have not been fully identified, although isotopic analyses from previous studies indicated a predominantly terrestrial source. This study investigates the role of fine sediment erosion and deposition (mechanisms and spatial patterns) in relation to OM transport. Geomorphic mapping within the Fanno Creek floodplain shows that a large portion (approximately 70%) of the banks are eroding or subject to erosion, likely as a result of the imbalance caused by anthropogenic alteration. Field measurements of long- and short-term bank erosion average 4.2 cm/year and average measurements of deposition for the watershed are 4.8 cm/year. The balance between average annual erosion and deposition indicates an export of 3,250 metric tons (tonnes, t) of fine sediment to the Tualatin River-about twice the average annual export of 1,880 t of sediment at a location 2.4 km from the creek's mouth calculated from suspended sediment load regressions from continuous turbidity data and suspended sediment samples. Carbon content from field samples of bank material, combined with fine sediment export rates, indicates that about 29-67 t of carbon, or about 49-116 t of OM, from bank sediment may be exported to the Tualatin River from Fanno Creek annually, an estimate that is a lower bound because it does not account for the mass wasting of organic-rich O and A soil horizons that enter the stream.

Preliminary investigation of phosphorus adsorption onto two types of iron oxide-organic matter complexes.

PubMed

Yan, Jinlong; Jiang, Tao; Yao, Ying; Lu, Song; Wang, Qilei; Wei, Shiqiang

2016-04-01

Iron oxide (FeO) coated by natural organic matter (NOM) is ubiquitous. The associations of minerals with organic matter (OM) significantly changes their surface properties and reactivity, and thus affect the environmental fate of pollutants, including nutrients (e.g., phosphorus (P)). In this study, ferrihydrite/goethite-humic acid (FH/GE-HA) complexes were prepared and their adsorption characteristics on P at various pH and ionic strength were investigated. The results indicated that the FeO-OM complexes showed a decreased P adsorption capacity in comparison with bare FeO. The maximum adsorption capacity (Qmax) decreased in the order of FH (22.17 mg/g)>FH-HA (5.43 mg/g)>GE (4.67 mg/g)>GE-HA (3.27 mg/g). After coating with HA, the amorphous FH-HA complex still showed higher P adsorption than the crystalline GE-HA complex. The decreased P adsorption observed might be attributed to changes of the FeO surface charges caused by OM association. The dependence of P adsorption on the specific surface area of adsorbents suggests that the FeO component in the complexes is still the main contributor for the adsorption surfaces. The P adsorptions on FeO-HA complexes decreased with increasing initial pH or decreasing initial ionic strength. A strong dependence of P adsorption on ionic strength and pH may demonstrate that outer-sphere complexes between the OM component on the surface and P possibly coexist with inner-sphere surface complexes between the FeO component and P. Therefore, previous over-emphasis on the contributions of original minerals to P immobilization possibly over-estimates the P loading capacity of soils, especially in humic-rich areas. Copyright © 2015. Published by Elsevier B.V.

Nanometer-scale structure of alkali-soluble bio-macromolecules of maize plant residues explains their recalcitrance in soil.

PubMed

Adani, Fabrizio; Salati, Silvia; Spagnol, Manuela; Tambone, Fulvia; Genevini, Pierluigi; Pilu, Roberto; Nierop, Klaas G J

2009-07-01

The quantity and quality of plant litter in the soil play an important role in the soil organic matter balance. Besides other pedo-climatic aspects, the content of recalcitrant molecules of plant residues and their chemical composition play a major role in the preservation of plant residues. In this study, we report that intrinsically resistant alkali-soluble bio-macromolecules extracted from maize plant (plant-humic acid) (plant-HA) contribute directly to the soil organic matter (OM) by its addition and conservation in the soil. Furthermore, we also observed that a high syringyl/guaiacyl (S/G) ratio in the lignin residues comprising the plant tissue, which modifies the microscopic structure of the alkali-soluble plant biopolymers, enhances their recalcitrance because of lower accessibility of molecules to degrading enzymes. These results are in agreement with a recent study, which showed that the humic substance of soil consists of a mixture of identifiable biopolymers obtained directly from plant tissues that are added annually by maize plant residues.

Microbial and geochemical assessment of bauxitic un-mined and post-mined chronosequence soils from Mocho Mountains, Jamaica.

PubMed

Lewis, Dawn E; Chauhan, Ashvini; White, John R; Overholt, Will; Green, Stefan J; Jasrotia, Puja; Wafula, Denis; Jagoe, Charles

2012-10-01

Microorganisms are very sensitive to environmental change and can be used to gauge anthropogenic impacts and even predict restoration success of degraded environments. Here, we report assessment of bauxite mining activities on soil biogeochemistry and microbial community structure using un-mined and three post-mined sites in Jamaica. The post-mined soils represent a chronosequence, undergoing restoration since 1987, 1997, and 2007. Soils were collected during dry and wet seasons and analyzed for pH, organic matter (OM), total carbon (TC), nitrogen (TN), and phosphorus. The microbial community structure was assessed through quantitative PCR and massively parallel bacterial ribosomal RNA (rRNA) gene sequencing. Edaphic factors and microbial community composition were analyzed using multivariate statistical approaches and revealed a significant, negative impact of mining on soil that persisted even after greater than 20 years of restoration. Seasonal fluctuations contributed to variation in measured soil properties and community composition, but they were minor in comparison to long-term effects of mining. In both seasons, post-mined soils were higher in pH but OM, TC, and TN decreased. Bacterial rRNA gene analyses demonstrated a general decrease in diversity in post-mined soils and up to a 3-log decrease in rRNA gene abundance. Community composition analyses demonstrated that bacteria from the Proteobacteria (α, β, γ, δ), Acidobacteria, and Firmicutes were abundant in all soils. The abundance of Firmicutes was elevated in newer post-mined soils relative to the un-mined soil, and this contrasted a decrease, relative to un-mined soils, in proteobacterial and acidobacterial rRNA gene abundances. Our study indicates long-lasting impacts of mining activities to soil biogeochemical and microbial properties with impending loss in soil productivity.

Does a strong pycnocline impact organic-matter preservation and accumulation in an anoxic setting? The case of the Orca Basin, Gulf of Mexico

NASA Astrophysics Data System (ADS)

Tribovillard, Nicolas; Bout-Roumazeilles, Viviane; Sionneau, Thomas; Serrano, Jean Carlos Montero; Riboulleau, Armelle; Baudin, François

2009-01-01

The Orca Basin (an intraslope depression located in the Gulf of Mexico) collects sedimentary particles of terrestrial origin (clastic and organic particles mainly supplied by the Mississippi River) and of marine origin (biogenic productivity). The basin is partly filled with dense brines leached from salt diapirs cropping out on the sea floor, and is permanently stratified. A strong pycnocline induces anoxic bottom conditions, expectedly favorable to organic matter (OM) preservation. Here, we report on OM in the upper 750 cm below sea floor of Core MD02-2552 (Holocene). The organic content is dominated by marine-derived amorphous OM. The organic assemblage is unexpectedly degraded to some extent, which may be accounted for by a relatively long residence time of organic particles at the halocline-pycnocline at ˜2240 m. Thus the organic particles are temporarily trapped and kept in contact with the dissolved oxygen-rich overlying water mass. Lastly, the land-derived organic fraction shows co-variations with the land-derived clay mineral supply.

Distribution and interactions of pentachlorophenol in soils: The roles of soil iron oxides and organic matter.

PubMed

Diagboya, Paul N; Olu-Owolabi, Bamidele I; Adebowale, Kayode O

2016-08-01

Soil iron oxides (IOs) and organic matter (OM) play varying roles in pentachlorophenol (PCP) retention and mobility, but the extent and mechanism are still unknown. Therefore, in order to have a better understanding of the adsorption of PCP on soils, batch sorption studies were carried out on whole soils and soils selectively treated to remove IOs (IOR) and OM (OMR). The effects of pH, time, and temperature were investigated. Results showed that PCP sorption was temperature and pH dependent; sorption decreased as both temperature and pH increased. Sorption was partly surface adsorption and partly partitioning within voids of IOs components as revealed by the kinetics models. The surface adsorption was multi-layer in nature. Equilibria were faster in the IOR soils than the untreated and OMR soils. IOs played greater roles in PCP sorption than OM. Removal of soil components, especially the IOs, as experienced in soils plagued by soil erosion, may lead to increased risks of PCP pollution of environmental media especially the aquifer. Copyright © 2016 Elsevier B.V. All rights reserved.

Distribution and interactions of pentachlorophenol in soils: The roles of soil iron oxides and organic matter

NASA Astrophysics Data System (ADS)

Diagboya, Paul N.; Olu-Owolabi, Bamidele I.; Adebowale, Kayode O.

2016-08-01

Soil iron oxides (IOs) and organic matter (OM) play varying roles in pentachlorophenol (PCP) retention and mobility, but the extent and mechanism are still unknown. Therefore, in order to have a better understanding of the adsorption of PCP on soils, batch sorption studies were carried out on whole soils and soils selectively treated to remove IOs (IOR) and OM (OMR). The effects of pH, time, and temperature were investigated. Results showed that PCP sorption was temperature and pH dependent; sorption decreased as both temperature and pH increased. Sorption was partly surface adsorption and partly partitioning within voids of IOs components as revealed by the kinetics models. The surface adsorption was multi-layer in nature. Equilibria were faster in the IOR soils than the untreated and OMR soils. IOs played greater roles in PCP sorption than OM. Removal of soil components, especially the IOs, as experienced in soils plagued by soil erosion, may lead to increased risks of PCP pollution of environmental media especially the aquifer.

Characterization of outer membranes isolated from Treponema pallidum, the syphilis spirochete.

PubMed

Radolf, J D; Robinson, E J; Bourell, K W; Akins, D R; Porcella, S F; Weigel, L M; Jones, J D; Norgard, M V

1995-11-01

Previous freeze-fracture electron microscopy (EM) studies have shown that the outer membrane (OM) of Treponema pallidum contains sparse transmembrane proteins. One strategy for molecular characterization of these rare OM proteins involves isolation of T. pallidum OMs. Here we describe a simple and extremely gentle method for OM isolation based upon isopycnic sucrose density gradient ultracentrifugation of treponemes following plasmolysis in 20% sucrose. Evidence that T. pallidum OMs were isolated included (i) the extremely low protein/lipid ratio of the putative OM fraction, (ii) a paucity of antigenic and/or biochemical markers for periplasmic, cytoplasmic membrane, and cytosolic compartments, and (iii) freeze-fracture EM demonstrating that the putative OMs contained intramembranous particles highly similar in size and density to those in native T. pallidum OMs. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis analysis revealed that the OMs contained a relatively small number of treponemal proteins, including several which did not appear to correspond to previously characterized T. pallidum antigens. Interestingly, these candidate rare OM proteins reacted poorly with syphilitic sera as determined by both conventional immunoblotting and enhanced chemiluminescence. Compared with whole cells, T. pallidum OMs were deficient in cardiolipin, the major lipoidal antigen reactive with antibodies in syphilitic sera. Also noteworthy was that other lipoidal constituents of OMs, including the recently discovered glycolipids, did not react with human syphilitic sera. These latter observations suggest that the poor antigenicity of virulent T. pallidum is a function of both the lipid composition and the low protein content of its OM.

Organic carbon characteristics in density fractions of soils with contrasting mineralogies

NASA Astrophysics Data System (ADS)

Yeasmin, Sabina; Singh, Balwant; Johnston, Cliff T.; Sparks, Donald L.

2017-12-01

This study was aimed to evaluate the role of minerals in the preservation of organic carbon (OC) in different soil types. Sequential density fractionation was done to isolate particulate organic matter (POM, <1.8 g cm-3) and mineral associated OM (MOM: 1.8-2.2, 2.2-2.6 and >2.6 g cm-3) from four soils, i.e., a Ferralsol, a Luvisol, a Vertisol and a Solonetz. Organic matter (OM) in the density fractions was characterised using diffuse reflectance Fourier transform infrared spectroscopy, X-ray photoelectron spectroscopy and mass spectroscopy in the original states (i.e., without any chemical pre-treatment), and after 6% sodium hypochlorite (NaOCl) and 10% hydrofluoric acid (HF) treatments. The NaOCl oxidation resistant fraction was considered as a relatively stable pool of OC and the HF soluble fraction was presumed as the mineral bound OC. Phyllosilicate-dominated soils, i.e., Vertisol, Luvisol and Solonetz, contained a greater proportion of POM than Fe and Al oxide-dominated Ferralsol. Wider C:N ratio and lower δ13C and δ15N in POM suggest the dominance of labile OC in this fraction and this was also supported by a greater proportion of NaOCl oxidised OC in the same fraction that was enriched with aliphatic C. The sequential density fractionation method effectively isolated OM into three distinct groups in the soils: (i) OM associated with Fe and Al oxides (>1.8 g cm-3 in the Ferralsol); (ii) OM associated with phyllosilicates (1.8-2.6 g cm-3) and (iii) OM associated with quartz and feldspar (>2.6 g cm-3) in the other three soils. Greater oxidation resistance, and more dissolution of OC during the HF treatment in the Fe and Al oxides dominated fractions suggest a greater potential of these minerals to protect OC from oxidative degradation as compared to the phyllosilicates, and quartz and feldspar matrices. OM associated with Fe and Al oxides was predominantly aromatic and carboxylate C. Decreased C:N ratio in the NaOCl oxidation resistant OM and HF soluble OM of phyllosilicates, and quartz and feldspars dominant fractions compared to their untreated fractions indicate a preferred retention of N rich organic compounds by these minerals. OM associated with phyllosilicates was enriched with protonated amide N and aromatic C. Quartz and feldspars associated OM comprised of N containing organic compounds and polysaccharides, although we don't expect any role of these minerals in their preservation. Our results imply that the abundance and surface properties of minerals in the soil largely control the dynamics of OC and subsequently protect OC from microbial cycling.

Using solid 13C NMR coupled with solution 31P NMR spectroscopy to investigate molecular species and lability of organic carbon and phosphorus from aquatic plants in Tai Lake, China.

PubMed

Liu, Shasha; Zhu, Yuanrong; Wu, Fengchang; Meng, Wei; Wang, Hao; He, Zhongqi; Guo, Wenjing; Song, Fanhao; Giesy, John P

2017-01-01

Forms and labilities of plant-derived organic matters (OMs) including carbon (C) and phosphorus (P) were fundamental for understanding their release, degradation and environmental behaviour in lake ecosystems. Thus, solid 13 C and solution 31 P nuclear magnetic resonance (NMR) spectroscopy were used to characterize biomass of six aquatic plants in Tai Lake, China. The results showed that carbohydrates (61.2% of the total C) were predominant C functional group in the solid 13 C NMR spectra of plant biomass, which may indicate high lability and bioavailability of aquatic plants-derived organic matter in lakes. There was 72.6-103.7% of the total P in aquatic plant biomass extracted by NaOH-EDTA extracts. Solution 31 P NMR analysis of these NaOH-EDTA extracts further identified several molecular species of P including orthophosphate (50.1%), orthophosphate monoesters (46.8%), DNA (1.6%) and pyrophosphate (1.4%). Orthophosphate monoesters included β-glycerophosphate (17.7%), hydrolysis products of RNA (11.7%), α-glycerophosphate (9.2%) and other unknown monoesters (2.1%). Additionally, phytate, the major form of organic P in many lake sediments, was detected in floating plant water poppy. These inorganic P (e.g. orthophosphate and pyrophosphate) and organic P (e.g. diester and its degradation products) identified in plant biomass were all labile and bioavailable P, which would play an important role in recycling of P in lakes. These results increased knowledge of chemical composition and bioavailability of OMs derived from aquatic plants in lakes.

Novel synthesis of manganese and vanadium mixed oxide (V{sub 2}O{sub 5}/OMS-2) as an efficient and selective catalyst for the oxidation of alcohols in liquid phase

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mahdavi, Vahid, E-mail: v-mahdavi@araku.ac.ir; Soleimani, Shima

2014-03-01

Graphical abstract: Oxidation of various alcohols is studied in the liquid phase over new composite mixed oxide (V{sub 2}O{sub 5}/OMS-2) catalyst using tert-butyl hydroperoxide (TBHP). The activity of V{sub 2}O{sub 5}/OMS-2 samples was considerably increased with respect to OMS-2 catalyst and these samples are found to be suitable for the selective oxidation of alcohols. - Highlights: • V{sub 2}O{sub 5}/K-OMS-2 with different V/Mn molar ratios prepared by the impregnation method. • Oxidation of alcohols was studied in the liquid phase over V{sub 2}O{sub 5}/K-OMS-2 catalyst. • V{sub 2}O{sub 5}/K-OMS-2 catalyst had excellent activity for alcohol oxidation. • Benzyl alcohol oxidationmore » using excess TBHP followed a pseudo-first order kinetic. • The selected catalyst was reused without significant loss of activity. - Abstract: This work reports the synthesis and characterization of mixed oxide vanadium–manganese V{sub 2}O{sub 5}/K-OMS-2 at various V/Mn molar ratios and prepared by the impregnation method. Characterization of these new composite materials was made by elemental analysis, BET, XRD, FT-IR, SEM and TEM techniques. Results of these analyses showed that vanadium impregnated samples contained mixed phases of cryptomelane and crystalline V{sub 2}O{sub 5} species. Oxidation of various alcohols was studied in the liquid phase over the V{sub 2}O{sub 5}/K-OMS-2 catalyst using tert-butyl hydroperoxide (TBHP) and H{sub 2}O{sub 2} as the oxidant. Activity of the V{sub 2}O{sub 5}/K-OMS-2 samples was increased considerably with respect to K-OMS-2 catalyst due to the interaction of manganese oxide and V{sub 2}O{sub 5}. The kinetic of benzyl alcohol oxidation using excess TBHP over V{sub 2}O{sub 5}/K-OMS-2 catalyst was investigated at different temperatures and a pseudo-first order reaction was determined with respect to benzyl alcohol. The effects of reaction time, oxidant/alcohol molar ratio, reaction temperature, solvents, catalyst recycling potential and leaching were investigated.« less

Rare earth elements and neodymium isotopes in sedimentary organic matter

NASA Astrophysics Data System (ADS)

Freslon, Nicolas; Bayon, Germain; Toucanne, Samuel; Bermell, Sylvain; Bollinger, Claire; Chéron, Sandrine; Etoubleau, Joel; Germain, Yoan; Khripounoff, Alexis; Ponzevera, Emmanuel; Rouget, Marie-Laure

2014-09-01

We report rare earth element (REE) and neodymium (Nd) isotope data for the organic fraction of sediments collected from various depositional environments, i.e. rivers (n = 25), estuaries (n = 18), open-ocean settings (n = 15), and cold seeps (n = 12). Sedimentary organic matter (SOM) was extracted using a mixed hydrogen peroxide/nitric acid solution (20%-H2O2-0.02 M-HNO3), after removal of carbonate and oxy-hydroxide phases with dilute hydrochloric acid (0.25 M-HCl). A series of experimental tests indicate that extraction of sedimentary organic compounds using H2O2 may be complicated occasionally by partial dissolution of sulphide minerals and residual carbonates. However, this contamination is expected to be minor for REE because measured concentrations in H2O2 leachates are about two-orders of magnitude higher than in the above mentioned phases. The mean REE concentrations determined in the H2O2 leachates for samples from rivers, estuaries, coastal seas and open-ocean settings yield relatively similar levels, with ΣREE = 109 ± 86 ppm (mean ± s; n = 58). The organic fractions leached from cold seep sediments display even higher concentration levels (285 ± 150 ppm; mean ± s; n = 12). The H2O2 leachates for most sediments exhibit remarkably similar shale-normalized REE patterns, all characterized by a mid-REE enrichment compared to the other REE. This suggests that the distribution of REE in leached sedimentary organic phases is controlled primarily by biogeochemical processes, rather than by the composition of the source from which they derive (e.g. pore, river or sea-water). The Nd isotopic compositions for organic phases leached from river sediments are very similar to those for the corresponding detrital fractions. In contrast, the SOM extracted from marine sediments display εNd values that typically range between the εNd signatures for terrestrial organic matter (inferred from the analysis of the sedimentary detrital fractions) and marine organic matter (inferred from the analysis of local surface seawater). A notable exception is the case of organic matter (OM) fractions leached from cold seep sediment samples, which sometimes exhibit εNd values markedly different from both terrigenous and surface seawater signatures. This suggests that a significant fraction of organic compounds in these sediments may be derived from chemosynthetic processes, recycling pore water REE characterized by a distinct isotopic composition. Overall, our results confirm that organic matter probably plays an important role in the oceanic REE budget, through direct scavenging and remineralization within the water column. Both the high REE abundances and the shape of shale-normalized patterns for leached SOM also suggest that OM degradation in sub-surface marine sediments during early diagenesis could control, to a large extent, the distribution of REE in pore waters. Benthic fluxes of organic-bound REE could hence substantially contribute to the exchange processes between particulates and seawater that take place at ocean margins. Neodymium isotopes could provide useful information for tracing the origin (terrestrial versus marine) and geographical provenance of organic matter, with potential applications in paleoceanography. In particular, future studies should further investigate the potential of Nd isotopes in organic compounds preserved in sedimentary records for reconstructing past variations of surface ocean circulation.

Removal and transformation of effluent organic matter (EfOM) in biotreated textile wastewater by GAC/O3 pre-oxidation and enhanced coagulation.

PubMed

Qian, Feiyue; Sun, Xianbo; Liu, Yongdi; Xu, Hongyong

2013-01-01

GAC/O3 (ozonation in the presence of granular activated carbon) combined with enhanced coagulation was employed to process biotreated textile wastewater for possible reuse. The doses of ozone, GAC and coagulant were the variables studied for optimization. The effects of different treatment processes on effluent organic matter (EfOM) characteristics, including biodegradability, hydrophobic and hydrophilic nature, and apparent molecular weight (AMW) distribution were also investigated. Compared with ozonation, GAC/O3 not only presented a higher pre-oxidation efficiency, but also improved the treatability of hydrophobic and high molecular weight compounds by enhanced coagulation. After treatment by GAC/O3 pre-oxidation (0.6 mg O3 x mg(-1) COD and 20 g x L(-1) GAC) and enhanced coagulation (25 mg x L(-1) Al3+ at pH 5.5), the removal efficiencies of chemical oxygen demand (COD), dissolved organic carbon (DOC) and colour were higher than those for coagulation alone by 17.3%, 12.0% and 25.6%, respectively. Residual organic matter consisted mainly of hydrophobic acids and hydrophilic compounds of AMW < 1 kDa, which were colourless and of limited biological availability. The combination of GAC/O3 and enhanced coagulation was proved to be a simple and effective treatment strategy for removing EfOM from biotreated textile wastewater.

SOM quality and phosphorus fractionation to evaluate degradation organic matter: implications for the restoration of soils after fire

NASA Astrophysics Data System (ADS)

Merino, Agustin; Fonturbel, Maria T.; Omil, Beatriz; Chávez-Vergara, Bruno; Fernandez, Cristina; Garcia-Oliva, Felipe; Vega, Jose A.

2016-04-01

The design of emergency treatment for the rehabilitation of fire-affected soils requires a quick diagnosis to assess the degree of degradation. For its implication in the erosion and subsequent evolution, the quality of soil organic matter (OM) plays a particularly important role. This paper presents a methodology that combines the visual recognition of the severity of soil burning with the use of simple analytical techniques to assess the degree of degradation of OM. The content and quality of the OM was evaluated in litter and mineral soils using thermogravimetry-differential scanning calorimetry (DSC-TG) spectroscopy, and the results were contrasted with 13C CP-MAS NMR. The types of methodologies were texted to assess the thermal analysis: a) the direct calculation of the Q areas related to three degrees of thermal stabilities: Q1 (200-375 °C; labil OM); Q2 (375-475 °C, recalcitrant OM); and Q3 (475-550 °C). b) deconvolution of DSC curves and calculation of each peak was expressed as a fraction of the total DSC curve area. Additionally, a P fractionation was done following the Hedley sequential extraction method. The severity levels visually showed different degrees of SOM degradation. Although the fire caused important SOM losses in moderate severities, changes in the quality of OM only occurred at higher severities. Besides, the labile organic P fraction decreased and the occluded inorganic P fraction increased in the high severity soils. These changes affect the OM processes such as hydrophobicity and erosion largely responsible for soil degradation post-fire. The strong correlations between the thermal parameters and NMR regions and derived measurements such as hydrophobicity and aromaticity show the usefulness of this technique as rapid diagnosis to assess the soil degradation.The marked loss of polysaccharide and transition to highly thermic-resistant compounds, visible in deconvoluted thermograms, which would explain the changes in microbial activity and soil nutrients availability (basal respiration, microbial biomass, qCO2, and enzymatic activity). And also it would have implications in hydrophobicity and stability of soil aggregates, leading to the extreme erosion rates that occur usually are found in soils affected by higher severities.

High-throughput characterization of sediment organic matter by pyrolysis-gas chromatography/mass spectrometry and multivariate curve resolution: A promising analytical tool in (paleo)limnology.

PubMed

Tolu, Julie; Gerber, Lorenz; Boily, Jean-François; Bindler, Richard

2015-06-23

Molecular-level chemical information about organic matter (OM) in sediments helps to establish the sources of OM and the prevalent degradation/diagenetic processes, both essential for understanding the cycling of carbon (C) and of the elements associated with OM (toxic trace metals and nutrients) in lake ecosystems. Ideally, analytical methods for characterizing OM should allow high sample throughput, consume small amounts of sample and yield relevant chemical information, which are essential for multidisciplinary, high-temporal resolution and/or large spatial scale investigations. We have developed a high-throughput analytical method based on pyrolysis-gas chromatography/mass spectrometry and automated data processing to characterize sedimentary OM in sediments. Our method consumes 200 μg of freeze-dried and ground sediment sample. Pyrolysis was performed at 450°C, which was found to avoid degradation of specific biomarkers (e.g., lignin compounds, fresh carbohydrates/cellulose) compared to 650°C, which is in the range of temperatures commonly applied for environmental samples. The optimization was conducted using the top ten sediment samples of an annually resolved sediment record (containing 16-18% and 1.3-1.9% of total carbon and nitrogen, respectively). Several hundred pyrolytic compound peaks were detected of which over 200 were identified, which represent different classes of organic compounds (i.e., n-alkanes, n-alkenes, 2-ketones, carboxylic acids, carbohydrates, proteins, other N compounds, (methoxy)phenols, (poly)aromatics, chlorophyll and steroids/hopanoids). Technical reproducibility measured as relative standard deviation of the identified peaks in triplicate analyses was 5.5±4.3%, with 90% of the RSD values within 10% and 98% within 15%. Finally, a multivariate calibration model was calculated between the pyrolytic degradation compounds and the sediment depth (i.e., sediment age), which is a function of degradation processes and changes in OM source type. This allowed validation of the Py-GC/MS dataset against fundamental processes involved in OM cycling in aquatic ecosystems. Copyright © 2015 Elsevier B.V. All rights reserved.

Seasonal and spatial variability of the OM/OC mass ratios and high regional correlation between oxalic acid and zinc in Chinese urban organic aerosols

NASA Astrophysics Data System (ADS)

Xing, L.; Fu, T.-M.; Cao, J. J.; Lee, S. C.; Wang, G. H.; Ho, K. F.; Cheng, M.-C.; You, C.-F.; Wang, T. J.

2013-04-01

We calculated the organic matter to organic carbon mass ratios (OM/OC mass ratios) in PM2.5 collected from 14 Chinese cities during summer and winter of 2003 and analyzed the causes for their seasonal and spatial variability. The OM/OC mass ratios were calculated two ways. Using a mass balance method, the calculated OM/OC mass ratios averaged 1.92 ± 0.39 year-round, with no significant seasonal or spatial variation. The second calculation was based on chemical species analyses of the organic compounds extracted from the PM2.5 samples using dichloromethane/methanol and water. The calculated OM/OC mass ratio in summer was relatively high (1.75 ± 0.13) and spatially-invariant due to vigorous photochemistry and secondary organic aerosol (OA) production throughout the country. The calculated OM/OC mass ratio in winter (1.59 ± 0.18) was significantly lower than that in summer, with lower values in northern cities (1.51 ± 0.07) than in southern cities (1.65 ± 0.15). This likely reflects the wider usage of coal for heating purposes in northern China in winter, in contrast to the larger contributions from biofuel and biomass burning in southern China in winter. On average, organic matter constituted 36% and 34% of Chinese urban PM2.5 mass in summer and winter, respectively. We report, for the first time, a high regional correlation between Zn and oxalic acid in Chinese urban aerosols in summer. This is consistent with the formation of stable Zn oxalate complex in the aerosol phase previously proposed by Furukawa and Takahashi (2011). We found that many other dicarboxylic acids were also highly correlated with Zn in the summer Chinese urban aerosol samples, suggesting that they may also form stable organic complexes with Zn. Such formation may have profound implications for the atmospheric abundance and hygroscopic properties of aerosol dicarboxylic acids.

Towards explaining excess CO2 production in wetlands - the roles of solid and dissolved organic matter as electron acceptors and of substrate quality

NASA Astrophysics Data System (ADS)

Knorr, Klaus-Holger; Gao, Chuanyu; Agethen, Svenja; Sander, Michael

2017-04-01

To understand carbon storage in water logged, anaerobic peatlands, factors controlling mineralization have been studied for decades. Temperature, substrate quality, water table position and the availability of electron acceptors for oxidation of organic carbon have been identified as major factors. However, many studies reported an excess carbon dioxide (CO2) production over methane (CH4) that cannot be explained by available electron acceptors, and peat soils did not reach strictly methanogenic conditions (i.e., a stoichiometric formation ratio of 1:1 of CO2 to CH4). It has been hypothesized that peat organic matter (OM) provides a previously unrecognized electron acceptor for microbial respiration, elevating CO2 to CH4 ratios. Microbial reduction of dissolved OM has been shown in the mid 90's, but only recently mediated electrochemical techniques opened the possibility to access stocks and changes in electron accepting capacities (EAC) of OM in dissolved and solid form. While it was shown that the EAC of OM follows redox cycles of microbial reduction and O2 reoxidation, changes in the EAC of OM were so far not related quantitatively to CO2 production. We therefore tested if CO2 production in anoxic peat incubations is balanced by the consumption of electron acceptors if EAC of OM is included. We set up anoxic incubations with peat and monitored production of CO2 and CH4, and changes in EAC of OM in the dissolved and solid phase over time. Interestingly, in all incubations, the EAC of dissolved OM was poorly related to CO2 and CH4 production. Instead, dissolved OM was rapidly reduced at the onset of the incubations and thereafter remained in reduced form. In contrast, the decrease in the EAC of particulate (i.e. non-dissolved) OM was closely linked to the observed production of non-methanogenic CO2. Thereby, the total EAC of the solid OM pool by far exceeded the EAC of the dissolved OM pool. Over the course of eight week incubations, measured decreases in the EAC of total NOM could explain 22-38 % of excess CO2 production in a weakly decomposed peat, 30-67 % of excess CO2 production in a well decomposed peat, and >100 % of excess CO2 production in a peat that had been exposed to oxygen for > 1 year. In this latter peat, EAC by OM explained 45-57 % of CO2 production, while reduction of sulfate available in this material readily explained the remaining fraction. Despite having considerable uncertainty arising from methodological challenges, the collected data demonstrated that accounting for the EACs of solid and dissolved OM may fully explain excess CO2 production. As we conservatively assumed a carbon oxidation state of zero for our budget calculations, a higher oxidation state of C in NOM as suggested by elemental analysis would result in electron equivalent budgets between EAC decreases and CO2 formation even closer to 100 %. A higher oxidation state of mineralized carbon seemed especially likely for weakly decomposed peat, as this material had higher concentrations of oxygen and showed the largest percentage of formed CO2 that could not be explained based on OM reduction.

The glycan keratan sulfate in inner ear crystals

NASA Technical Reports Server (NTRS)

Fermin, C. D.; Martin, D. S.; Li, Y. T.; Li, S. C.

1995-01-01

The otoconial matrix (OM) of chicks (Gallus domesticus) inner ear was analyzed. Histochemically the OM was reacted with phosphotungstic acid (PTA) and immunohistochemically with the monoclonal antibody antikeratan sulfate (antiKS). The OM was digested with the enzyme endo-beta-galactosidase (E beta Galase) or separated by 1D and 2D gel electrophoresis. PTA which reacts with glycoproteins precipitated the OM, suggesting that the OM contains glycoproteins. A central core in each crystal had no PTA staining, suggesting that the core lacked glycoproteins. Anti KS antibody stained the OM with increased density in older embryos as determined by color thresholding. E beta Galase, which cleaves the lactosamine repeating units in KS, decreased the immunostain by 30% in the OM and by 20% in the cartilage. The OM from the utricle, saccule and macula lagena contained similar molecular weight bands. Five dense bands in the OM were less dense in tissue and blood controls, suggesting that such bands are enriched in the OM. Isoelectric focusing of the OM showed a negatively charged high molecular weight smear not present in blood and faint in tissue controls. The high affinity of the OM for the cationic PTA stain, the strong immunohistochemical reaction of the OM with anti KS antibody and high molecular weight negative smear in 2D gels taken together suggest that: a) the OM contains large amounts of glycoproteins and glycans, one of which is keratan sulfate, because its immuno stain with antiKS antibody was decreased by the enzyme E beta Galase, b) the utricle, saccule and macula lagena may have similar composition, and c) the concentration of KS may increase gradually until complete mineralization of the OM is reached.

An isotopic investigation of the temperature response of young and old soil organic matter respiration

NASA Astrophysics Data System (ADS)

Burns, Nancy; Cloy, Joanna; Garnett, Mark; Reay, David; Smith, Keith; Otten, Wilfred

2010-05-01

The effect of temperature on rates of soil respiration is critical to our understanding of the terrestrial carbon cycle and potential feedbacks to climate change. The relative temperature sensitivity of labile and recalcitrant soil organic matter (SOM) is still controversial; different studies have produced contrasting results, indicating limited understanding of the underlying relationships between stabilisation processes and temperature. Current global carbon cycle models still rely on the assumption that SOM pools with different decay rates have the same temperature response, yet small differences in temperature response between pools could lead to very different climate feedbacks. This study examined the temperature response of soil respiration and the age of soil carbon respired from radiocarbon dated fractions of SOM (free, intra-aggregate and mineral-bound) and whole soils (organic and mineral layers). Samples were collected from a peaty gley soil from Harwood Forest, Northumberland, UK. SOM fractions were isolated from organic layer (5 - 17 cm) material using high density flotation and ultrasonic disaggregation - designated as free (< 1.8 g cm-3), intra-aggregate (< 1.8 g cm-3 within aggregates > 1.8 g cm-3) and mineral-bound (> 1.8 g cm-3) SOM. Fractions were analysed for chemical composition (FTIR, CHN analysis, ICP-OES), 14C (AMS), δ13C and δ15N (MS) and thermal properties (DSC). SOM fractions and bulk soil from the organic layer and the mineral layer (20 - 30 cm) were incubated in sealed vessels at 30 ° C and 10 ° C for 3 or 9 months to allow accumulation of CO2 sufficient for sampling. Accumulated respired CO2 samples were collected on zeolite molecular sieve cartridges and used for AMS radiocarbon dating. In parallel, material from the same fractions and layers were incubated at 10 ° C, 15 ° C, 25 ° C and 30 ° C for 6 months and sampled weekly for CO2 flux measurements using GC chromatography. Initial data have shown radiocarbon ages ranging from modern to 219 y BP in bulk soil from the organic layer (5 - 17 cm depth), while free OM ranged from modern to 74 y BP, intra-aggregate OM 413 - 657 y BP and mineral-bound material 562 - 646 y BP. Bulk soil from the mineral layer (20 - 30 cm) was considerably older, at 2142 - 2216 y BP. These results indicate that within the upper layer of soil, mineral-bound OM represents a slow-cycling or recalcitrant pool of SOM; intra-aggregate OM is slightly less recalcitrant than mineral-bound OM, while free OM represents a fast-cycling, labile pool of SOM. Bulk soil from the mineral layer (20 - 30 cm) is much older than mineral-bound OM in the upper layers, suggesting the involvement of other stabilising factors associated with depth besides mineral interactions. The link between age and recalcitrance is corroborated by measured CO2 flux rates, which increase with decreasing age of fractions. Results for the 14C contents and calculated ages of isolated SOM fractions, bulk organic and mineral soils and their respired CO2 at different temperatures will be discussed and compared with long term trends in soil/SOM fraction CO2 fluxes and their temperature sensitivity. Data on soil chemical characteristics and δ13C values will also be presented.

Methane Emission and Milk Production of Dairy Cows Grazing Pastures Rich in Legumes or Rich in Grasses in Uruguay.

PubMed

Dini, Yoana; Gere, José; Briano, Carolina; Manetti, Martin; Juliarena, Paula; Picasso, Valentin; Gratton, Roberto; Astigarraga, Laura

2012-06-08

Understanding the impact of changing pasture composition on reducing emissions of GHGs in dairy grazing systems is an important issue to mitigate climate change. The aim of this study was to estimate daily CH₄ emissions of dairy cows grazing two mixed pastures with contrasting composition of grasses and legumes: L pasture with 60% legumes on Dry Matter (DM) basis and G pasture with 75% grasses on DM basis. Milk production and CH₄ emissions were compared over two periods of two weeks during spring using eight lactating Holstein cows in a 2 × 2 Latin square design. Herbage organic matter intake (HOMI) was estimated by chromic oxide dilution and herbage organic matter digestibility (OMD) was estimated by faecal index. Methane emission was estimated by using the sulfur hexafluoride (SF6) tracer technique adapted to collect breath samples over 5-day periods. OMD (0.71) and HOMI (15.7 kg OM) were not affected by pasture composition. Milk production (20.3 kg/d), milk fat yield (742 g/d) and milk protein yield (667 g/d) were similar for both pastures. This may be explained by the high herbage allowance (30 kg DM above 5 cm/cow) which allowed the cows to graze selectively, in particular in grass sward. Similarly, methane emission expressed as absolute value (368 g/d or 516 L/d) or expressed as methane yield (6.6% of Gross Energy Intake (GEI)) was not affected by treatments. In conclusion, at high herbage allowance, the quality of the diet selected by grazing cows did not differ between pastures rich in legumes or rich in grasses, and therefore there was no effect on milk or methane production.

Nitrogen isotope record of a perturbed paleoecosystem in the aftermath of the end-Triassic crisis, Doniford section, SW England

NASA Astrophysics Data System (ADS)

Paris, Guillaume; Beaumont, ValéRie; Bartolini, Annachiara; CléMence, Marie-Emilie; Gardin, Silvia; Page, Kevin

2010-08-01

The Triassic-Jurassic transition (TJ) is characterized by successive perturbations of the carbon cycle during a time of biotic disruption as recorded by the carbon isotopic composition of organic matter (δ13Corg). The nitrogen isotopic composition of sedimentary organic matter (δ15Norg) constitutes a key parameter to explore the functioning of the ecosystem during carbon cycle perturbations and biological crises, because it provide information on seawater redox conditions and/or nutrient cycling. Here we report the first continuous δ15Norg record across the TJ transition at the Doniford Bay section (Bristol Channel Basin, UK), combined with δ13Corg, kerogen typology and carbon (δ13Cmin) and oxygen (δ18Omin) isotopic composition of bulk carbonates. The end Triassic is characterized by a major negative excursion both in δ13Corg and δ13Cmin, very low TOC (Total Organic Carbon, wt%) and high δ15Norg values, associated with a sea level lowstand. A second δ13Corg negative excursion occurs during the lower Hettangian. This interval is characterized by phases of carbonate production increase alternated with phases of exceptional accumulations of type I organic matter (up to 12%) associated with lower δ15Norg and δ13Corg. This alternation likely reflects a succession of nutrient input increase to the basin leading to enhanced productivity and eutrophication, which promoted a primary production driven by organic-walled prokaryotic organisms. The following OM export increase generates anaerobic conditions within the basin. These events occur between periods of relatively good seawater column ventilation and nutrient recycling boosting the carbonate producer recovery. Ecosystems remain perturbed in the Bristol Channel Basin during the aftermath of the end-Triassic crisis.

Recent organic carbon sequestration in the shelf sediments of the Bohai Sea and Yellow Sea, China

NASA Astrophysics Data System (ADS)

Hu, Limin; Shi, Xuefa; Bai, Yazhi; Qiao, Shuqing; Li, Li; Yu, Yonggui; Yang, Gang; Ma, Deyi; Guo, Zhigang

2016-03-01

This study provides an extensive depiction of regional scale sedimentary total organic carbon (TOC) sequestration in the Bohai Sea (BS) and Yellow Sea (YS), marginal system of the western Pacific Ocean. The spatial pattern of the sediment mass accumulation rate (MAR) in the BS and YS was summarized based on a 100-year timescale. The relatively higher MAR (3 - 7 g/cm2/y) in the Yellow River estuary, compared to the adjacent areas, indicate a predominant impact of river discharge on the modern sedimentation process in the BS. Relatively stable sedimentary environment in the offshore mud deposits of the BS and YS was also identified based on the along-core sediment composition and radionuclides profiles. The corresponding spatial pattern of grain size and TOC content suggest a hydrodynamic constraint on the sedimentary TOC accumulation. Moreover, in spite of the various TOC sources revealed by the bulk organic matter (OM) proxies (C/N ratio and δ13C), the restriction of these bulk parameters with potential masking of the signature of terrigenous OM was also identified. The average burial flux of TOC (15.3 g C/m2/y) was finally obtained with a total sequestration of 5.6 × 106 t C/y, suggesting that the BS and YS serve as a significant repository of sedimentary TOC. The overall organic carbon storage capacity of the BS and YS is mainly sustained by the fluvial/land-based OM input, high phytoplankton primary productivity, convergent hydrodynamic and stable depositional settings.

The role of visible light active TiO2 specimens on the solar photocatalytic disinfection of E. coli.

PubMed

Birben, Nazmiye Cemre; Tomruk, Ayse; Bekbolet, Miray

2017-05-01

Solar photocatalytic disinfection efficiency of novel visible light activated (VLA) photocatalysts was evaluated with the aim of assessing inactivation of Escherichia coli as the pathogen indicator organism present in drinking water. Influence of humic acid (HA) on the photocatalytic disinfection efficiency of the specified VLA TiO 2 specimens i.e., N-doped, Se-doped, and Se-N co-doped TiO 2 was also investigated. Photocatalytic disinfection efficiency was assessed by the enumeration of bacteria following selected irradiation periods. Degradation and compositional changes in organic matter (OM) was also tracked by means of UV-vis and advanced fluorescence spectroscopic (EEM features) parameters. Photocatalytic mineralization of the organic matter was followed by dissolved organic carbon contents. Presence of HA as a model organic compound of natural organic matter (NOM) displayed a retardation effect on solar photocatalytic abatement of E. coli. However, no distinctly different effect was observed under solar photolytic conditions due to the presence of HA. Regrowth of E. coli could not be assessed under the specified experimental conditions. A comparison was introduced with respect to the use of undoped TiO 2 P-25 as the photocatalyst.

The use of amino acid indices for assessing organic matter quality and microbial abundance in deep-sea Antarctic sediments of IODP Expedition 318

USGS Publications Warehouse

Carr, Stephanie A; Mills, Christopher T.; Mandernack, Kevin W

2016-01-01

The Adélie Basin, located offshore of the Wilkes Land margin, experiences unusually high sedimentation rates (~ 2 cm yr− 1) for the Antarctic coast. This study sought to compare depthwise changes in organic matter (OM) quantity and quality with changes in microbial biomass with depth at this high-deposition site and an offshore continental margin site. Sediments from both sites were collected during the International Ocean Drilling (IODP) Program Expedition 318. Viable microbial biomass was estimated from concentrations of bacterial-derived phospholipid fatty acids, while OM quality was assessed using four different amino acid degradation proxies. Concentrations of total hydrolysable amino acids (THAA) measured from the continental margin suggest an oligotrophic environment, with THAA concentrations representing only 2% of total organic carbon with relative proportions of non-protein amino acids β-alanine and γ-aminobutyric acid as high as 40%. In contrast, THAA concentrations from the near-shore Adélie Basin represent 40%–60% of total organic carbon. Concentrations of β-alanine and γ-aminobutyric acid were often below the detection limit and suggest that the OM of the basin as labile. DI values in surface sediments at the Adélie and margin sites were measured to be + 0.78 and − 0.76, reflecting labile and more recalcitrant OM, respectively. Greater DI values in deeper and more anoxic portions of both cores correlated positively with increased relative concentrations of phenylalanine plus tyrosine and may represent a change of redox conditions, rather than OM quality. This suggests that DI values calculated along chemical profiles should be interpreted with caution. THAA concentrations, the percentage of organic carbon (CAA%) and total nitrogen (NAA%) represented by amino acids at both sites demonstrated a significant positive correlation with bacterial abundance estimates. These data suggest that the selective degradation of amino acids, as indicated by THAA concentrations, CAA% or NAA% values may be a better proxy for describing the general changes in sedimentary bacterial abundances than total organic matter or bulk sedimentation rates.

Role of CaCO3 and Charcoal Application on Organic Matter Retention in Silt-sized Aggregates

NASA Astrophysics Data System (ADS)

Berhe, A. A.; Kaiser, M.; Ghezzehei, T.; Myrold, D.; Kleber, M.

2011-12-01

The effectiveness of charcoal and calcium carbonate (CaCO3) applications to improve soil conditions has been well documented. However, their influence on the formation of silt-sized aggregates and the amount and protection of associated organic matter (OM) against microbial decomposition under differing soil mineralogical and microbiological conditions are still unknown. For sustainable management of agricultural soils, silt-sized aggregates (2-50 μm) are of particularly large importance because they store up to 60% of soil organic carbon and with mean residence times between 70 and 400 years. The objectives of this study are i) to analyze the ability of soil amendments (CaCO3, charcoal and their combined application) to increase the amount of silt-sized aggregates and associated organic matter, ii) vary soil mineral conditions to establish relevant boundary conditions for amendment-induced aggregation process, iii) to determine how amendment-induced changes in formation of silt-sized aggregates relate to microbial decomposition of OM. We set up artificial high reactive (clay: 40%, sand: 57%, SOM: 3%) and low reactive soils (clay: 10%, sand: 89%, SOM: 1%) and mixed them with charcoal (1%) and/or CaCO3 (0.2%). The samples were adjusted to a water potential of 0.3 bar using a nutrient solution and sub samples were incubated with microbial innoculum. After four months, silt-sized aggregates are separated by a combination of wet-sieving and sedimentation. We hypothesize that the relative increase in amount of silt-sized aggregates and associated OM is larger for less reactive soils than for high reactive soils because of a relative larger increase in binding agents by addition of charcoal and/or CaCO3 in less reactive soils. The effect of charcoal and/or CaCO3 application on the amount of silt-sized aggregates and associated OM is expected to increases with an increase in microbial activity. Between different treatments, we expect the incubated 'charcoal+CaCO3' combination to have the largest effect on silt-size scale aggregation processes because the amount of microbial derived cementing agents, charcoal derived functional groups containing OM, and Ca2+ ions are enhanced at the same time.

Anthracene and pyrene photolysis kinetics in aqueous, organic, and mixed aqueous-organic phases

NASA Astrophysics Data System (ADS)

Grossman, Jarod N.; Stern, Adam P.; Kirich, Makena L.; Kahan, Tara F.

2016-03-01

Condensed phases in the atmosphere, such as cloud droplets and aerosols, often contain both water and organic matter (OM). Reactivity can differ significantly between aqueous and organic phases. We have measured photolysis kinetics of the polycyclic aromatic hydrocarbons (PAHs) anthracene and pyrene in several organic solvents and in water, as well as in miscible and phase-separated aqueous-organic mixtures at atmospherically-relevant wavelengths. Photolysis rate constants generally increased with increasing solvent polarity; photolysis of both PAHs was more than ten times faster in water than in octanol. Local polarity had a much greater effect on PAH photolysis kinetics than changes in PAH absorptivity or singlet oxygen concentrations. Photolysis kinetics in homogeneous aqueous-organic mixtures varied monotonically with2 OM volume fraction. Kinetics in immiscible (phase-separated) solutions were more complex, with different dependences on OM content observed in stagnant and turbulent solutions. Our results suggest that OM could greatly affect the photochemical lifetimes of PAHs in atmospheric condensed phases such as aerosols, even if the OM does not itself absorb photons.

Hydrologic controls on Congo River particulate organic carbon source and reservoir age

NASA Astrophysics Data System (ADS)

Hemingway, J. D.; Schefuß, E.; Spencer, R. G.; Dinga, B. J.; Eglinton, T. I.; McIntyre, C.; Galy, V.

2016-12-01

Tropical rivers are a major source of organic matter (OM) to the coastal ocean and play a large role in the global carbon cycle. As such, it is critical to understand the sources, sinks, and transformations of OM during fluvial transit over seasonal and inter-annual timescales. Here we present dissolved organic carbon (DOC) concentrations, particulate OM (POM) composition (δ13C, δ15N, Δ14C, N/C), and glycerol dialkyl glycerol tetraether (GDGT) biomarker distributions from a 34-month time-series near the mouth of the Congo River. An end-member mixing model based on δ13C and N/C indicates that exported POM is consistently dominated by C3 tropical rainforest soil inputs, with increasing contributions by C3 tropical plant vegetation and decreasing contributions by autochthonous phytoplankton at high discharge. Calculated Δ14C values of the C3-soil end member reveal significant and variable pre-aging prior to export, especially during the year 2011 when southern-hemisphere discharge reached record lows (mean = -176‰, standard deviation = 93‰). In contrast, Δ14C values were stable near -50‰ between January and June 2013 when southern-hemisphere discharge was highest. These results indicate that headwater POM is diluted and/or overprinted by pre-aged soils during transit through the Cuvette Congolaise swamp forest, while left-bank tributaries export significantly less pre-aged material. GDGT distributions are in agreement, as the methylation and cyclization of branched tetraethers and the GDGT-0/crenarchaeol ratio reflect a significant incorporation of compounds produced in permanently inundated Cuvette Congolaise swamp-forest soils when discharge through this region is high, especially in 2011. This study provides a mechanistic link between hydrology and carbon cycling in the world's second largest tropical river and suggests that, if recent observed decreases in springtime precipitation over the Congo basin persist, future hydrologic conditions will further bias toward export of protracted, swamp-forest-derived OM sources.

Origins of terrestrial organic matter in surface sediments of the East China Sea shelf

NASA Astrophysics Data System (ADS)

Zhang, Hailong; Xing, Lei; Zhao, Meixun

2017-10-01

Terrestrial organic matter (TOM) is an important component of marine sedimentary OM, and revealing the origins and transport mechanisms of TOM to the East China Sea (ECS) is important for understanding regional carbon cycle. A novel approach combining molecular proxies and compound-specific carbon isotopes is used to quantitatively constrain the origins and transport mechanisms of TOM in surface sediments from the ECS shelf. The content of terrestrial biomarkers of (C27+C29+C31) n-alkanes (52 to 580 ng g-1) revealed a seaward decreasing trend, the δ13CTOC values (-20.6‰ to -22.7‰) were more negative near the coast, and the TMBR (terrestrial and marine biomarker ratio) values (0.06 to 0.40) also revealed a seaward decreasing trend. These proxies all indicated more TOM (up to 48%) deposition in the coastal areas. The Alkane Index, the ratio of C29/(C29+C31) n-alkanes indicated a higher proportion of grass vegetation in the coastal area; While the δ13C values of C29 n-alkane (-29.3‰ to -33.8‰) indicated that terrestrial plant in the sediments of the ECS shelf were mainly derived from C3 plants. Cluster analysis afforded detailed estimates of different-sourced TOM contributions and transport mechanisms. TOM in the Zhejiang-Fujian coastal area was mostly delivered by the Changjiang River, and characterized by higher %TOM (up to 48%), higher %C3 plant OM (68%-85%) and higher grass plant OM (56%-61%); TOM in the mid-shelf area was mostly transported by aerosols, and characterized by low %TOM (less than 17%), slightly lower C3 plant OM (56%-72%) and lower grass plant OM (49%-55%).

Marine biogeochemical influence on primary sea spray aerosol composition in the Southern Ocean: predictions from a mechanistic model

NASA Astrophysics Data System (ADS)

McCoy, D.; Burrows, S. M.; Elliott, S.; Frossard, A. A.; Russell, L. M.; Liu, X.; Ogunro, O. O.; Easter, R. C.; Rasch, P. J.

2014-12-01

Remote marine clouds, such as those over the Southern Ocean, are particularly sensitive to variations in the concentration and chemical composition of aerosols that serve as cloud condensation nuclei (CCN). Observational evidence indicates that the organic content of fine marine aerosol is greatly increased during the biologically active season near strong phytoplankton blooms in certain locations, while being nearly constant in other locations. We have recently developed a novel modeling framework that mechanistically links the organic fraction of submicron sea spray to ocean biogeochemistry (Burrows et al., in discussion, ACPD, 2014; Elliott et al., ERL, 2014). Because of its combination of large phytoplankton blooms and high wind speeds, the Southern Ocean is an ideal location for testing our understanding of the processes driving the enrichment of organics in sea spray aerosol. Comparison of the simulated OM fraction with satellite observations shows that OM fraction is a statistically significant predictor of cloud droplet number concentration over the Southern Ocean. This presentation will focus on predictions from our modeling framework for the Southern Ocean, specifically, the predicted geographic gradients and seasonal cycles in the aerosol organic matter and its functional group composition. The timing and location of a Southern Ocean field campaign will determine its utility in observing the effects of highly localized and seasonal phytoplankton blooms on aerosol composition and clouds. Reference cited: Burrows, S. M., Ogunro, O., Frossard, A. A., Russell, L. M., Rasch, P. J., and Elliott, S.: A physically-based framework for modelling the organic fractionation of sea spray aerosol from bubble film Langmuir equilibria, Atmos. Chem. Phys. Discuss., 14, 5375-5443, doi:10.5194/acpd-14-5375-2014, 2014. Elliott, S., Burrows, S. M., Deal, C., Liu, X., Long, M., Ogunro, O., Russell, L. M., and Wingenter O.. "Prospects for simulating macromolecular surfactant chemistry at the ocean-atmosphere boundary." Environmental Research Letters 9, no. 6 (2014): 064012.

Soil carbon and nitrogen pools in mid- to late-successional forest stands of the northwestern United States: Potential impact of fire

Treesearch

Deborah S. Page-Dumroese; Martin F. Jurgensen

2006-01-01

When sampling woody residue (WR) and organic matter (OM) present in forest floor, soil wood, and surface mineral soil (0­30 cm) in 14 mid- to late-successional stands across a wide variety of soil types and climatic regimes in the northwestern USA, we found that 44%-84% of carbon (C) was in WR and surface OM, whereas >80% of nitrogen (N) was in the mineral soil. In...

USE OF δ13C, δ15N AND CARBON TO NITROGEN RATIOS TO EVALUATE THE IMPACT OF SEWAGE DERIVED PARTICULATE ORGANIC MATTER ON THE BENTHIC COMMUNITIES OF THE SOUTHERN CALIFORNIA BIGHT

EPA Science Inventory

We present stable isotope (δ¹³C and δ¹⁵N) measurements of particulate organic matter (POM) sources and benthic organic matter (OM) compartments, and sediment C/N ratios from the coastal area of the southern end of the Southern California Bight (SCB). We use ...

Simultaneous removal of phosphorus and EfOM using MIEX, coagulation, and low-pressure membrane filtration.

PubMed

Kim, Hyun-Chul; Timmes, Thomas C; Dempsey, Brian A

2015-01-01

The feasibility of using magnetic ion exchange (MIEX) treatment, in-line alum coagulation, and low-pressure membrane filtration was investigated for the simultaneous removal of total phosphorus (TP) and effluent organic matter (EfOM) from biologically treated wastewater. The focus was also placed on minimizing fouling of polyvinylidene fluoride and polyethersulfone membranes, which are the most commonly used low-pressure membranes in new and retrofit wastewater treatment plants. MIEX alone was effective for the removal of EfOM, and MIEX plus a small alum dose was very effective in removing both EfOM and TP. MIEX removed phosphorus, but organic acids in EfOM were preferentially removed, and the effects of competing anions on the removal of EfOM were insignificant. All the pretreatment strategies decreased the resistance to filtration. The greatest decrease in fouling was achieved by using MIEX (15 mL L⁻¹) plus a very low dose of alum (∼0.5 mg Al L⁻¹). Sweep floc coagulation using alum and without MIEX also significantly decreased fouling but did not effectively remove EfOM and produced high floc volume that could be problematic for inside-out hollow-fibre modules. The addition of these reagents into rapid mix followed by membrane filtration would provide operational simplicity and could be easily retrofitted at existing membrane filtration facilities.

Inferring changes in soil organic matter in post-wildfire soil burn severity levels in a temperate climate.

PubMed

Merino, Agustín; Fonturbel, María T; Fernández, Cristina; Chávez-Vergara, Bruno; García-Oliva, Felipe; Vega, Jose A

2018-06-15

Simple, rapid and reliable methods of assessing soil burn severity (SBS) are required in order to prioritize post-fire emergency stabilization actions. SBS proxies based on visual identification and changes in soil organic matter (SOM) content and quality can be related to other soil properties in order to determine the extent to which soil is perturbed following fire. This task is addressed in the present study by an approach involving the use of differential scanning calorimetry-thermogravimetric analysis (DSC-TGA) to determine changes in SOM generated in soils subjected to different levels of SBS. Intact topsoil monoliths comprising the organic horizons and the surface mineral soil (alumic-humic umbrisols) were collected from a representative P. pinaster stand in NW Spain. The monoliths were experimentally burned in a combustion wind tunnel to simulate different fire conditions (fuel bed comprising forest pine litter and wood; air flow, 0.6 m s -1 ). Changes in OM properties in the soil organic layer and mineral soils samples (0-2 cm) at the different temperatures and SBS levels were identified. For both duff and mineral soil, the data revealed a temperature-induced increase in aromatic compounds and a concomitant decrease of carbohydrates and alkyl products. However, for a given temperature, the degree of carbonization/aromatization was lower in the mineral soil than in the duff, possibly due to the different composition of the OM and to the different combustion conditions. The low degree of aromatization of the organic matter suggests that this soil component could undergo subsequent biological degradation. SOM content and thermal recalcitrance (measured as T50) discriminated the SBS levels. Use of visual identification of SBS levels in combination with DSC-TGA enables rapid evaluation of the spatial variability of the effects of fire on SOM properties. This information is useful to predict soil degradation process and implement emergency soil stabilization techniques. Copyright © 2018 Elsevier B.V. All rights reserved.

Next-generation non-starch polysaccharide-degrading, multi-carbohydrase complex rich in xylanase and arabinofuranosidase to enhance broiler feed digestibility.

PubMed

Cozannet, Pierre; Kidd, Michael T; Montanhini Neto, Roberto; Geraert, Pierre-André

2017-08-01

This study was carried out to evaluate the effect of a multi-carbohydrase complex (MCC) rich in xylanase (Xyl) and arabinofuranosidase (Abf) on overall broiler feed digestibility in broilers. Energy utilization and digestibility of dry matter (DM), organic matter (OM), protein, starch, fat, and insoluble and soluble fibers were measured using the mass-balance method. The experiment was carried out on 120 broilers (3-week-old chickens). Broilers were distributed over 8 treatments to evaluate the effect of the dietary arabinoxylan content and nutrient density with and without MCC (Rovabio® Advance). The graded content of arabinoxylan (AX) was obtained using different raw materials (wheat, rye, barley, and dried distillers' wheat). Diet-energy density was modified with added fat. Measurements indicated that nutrient density and AX content had a significant effect on most digestibility parameters. Apparent metabolizable energy (AME) was significantly increased (265 kcal kg-1) by MCC. The addition of MCC also resulted in significant improvement in the digestibility of all evaluated nutrients, with average improvements of 3.0, 3.3, 3.2, 3.0, 6.2, 2.9, 5.8, and 3.8% units for DM, OM, protein, starch, fat, insoluble and soluble fibers, and energy utilization, respectively. The interaction between MCC and diet composition was significant for the digestibility of OM, fat, protein, and energy. Nutrient digestibility and diet AME were negatively correlated with AX content (P < 0.001). However, the addition of MCC resulted in a reduction of this negative effect (P < 0.001). The AME of diets with and without the addition of MCC were successfully predicted by the diet digestible nutrient (i.e., starch, protein, fat, insoluble and soluble fibers) content with and without MCC (R2 = 0.87; RSD = 78 kcal kg-1). This study confirms that the presence of AX in wheat-based diets and wheat-based diets with other cereals and cereal by-products reduces nutrient digestibility in broiler chickens. Furthermore, the dietary addition of MCC, which is rich in Xyn and Abf, reduced deleterious effect of fiber and improved overall nutrient digestibility in broiler diets. © 2017 Poultry Science Association Inc.

Additive or non-additive effect of mixing oak in pine stands on soil properties depends on the tree species in Mediterranean forests.

PubMed

Brunel, Caroline; Gros, Raphael; Ziarelli, Fabio; Farnet Da Silva, Anne Marie

2017-07-15

This study investigated how oak abundance in pine stands (using relative Oak Basal Area %, OBA%) may modulate soil microbial functioning. Forests were composed of sclerophyllous species i.e. Quercus ilex mixed with Pinus halepensis Miller or of Q. pubescens mixed with P. sylvestris. We used a series of plots with OBA% ranging from 0 to 100% in the two types of stand (n=60) and both OLF and A-horizon compartments were analysed. Relations between OBA% and either soil chemical (C and N contents, quality of organic matter via solid-state NMR, pH, CaCO 3 ) or microbial (enzyme activities, basal respiration, biomass and catabolic diversity via BIOLOG) characteristics were described. OBA% increase led to a decrease in the recalcitrant fraction of organic matter (OM) in OLF and promoted microbial growth. Catabolic profiles of microbial communities from A-horizon were significantly modulated in Q. ilex and P. halepensis stand by OBA% and alkyl C to carboxyl C ratio (characteristic of cutin from Q. ilex tissues) and in Q. pubescens and P. sylvestris stands, by OBA% and pH. In A-horizon under Q. ilex and P. halepensis stands, linear regressions were found between catabolic diversity, microbial biomass and OBA% suggesting an additive effect. Conversely, in A-horizon Q. pubescens and P. sylvestris stands, the relationship between OBA% and either cellulase activities, polysaccharides or ammonium contents, suggested a non-additive effect of Q. pubescens and P. sylvestris, enhancing mineralization of the OM labile fraction for plots characterized by an OBA% ranging from 40% to 60%. Mixing oak with pine thus favored microbial dynamics in both type of stands though OBA% print varied with tree species and consequently sustainable soil functioning depend strongly on the composition of mixed stands. Our study indeed revealed that, when evaluating the benefits of forest mixed stand on soil microbial functioning and OM turnover, the identity of tree species has to be considered. Copyright © 2017 Elsevier B.V. All rights reserved.

A comparison of the endotoxin biosynthesis and protein oxidation pathways in the biogenesis of the outer membrane of Escherichia coli and Neisseria meningitidis

PubMed Central

Piek, Susannah; Kahler, Charlene M.

2012-01-01

The Gram-negative bacterial cell envelope consists of an inner membrane (IM) that surrounds the cytoplasm and an asymmetrical outer-membrane (OM) that forms a protective barrier to the external environment. The OM consists of lipopolysaccahride (LPS), phospholipids, outer membrane proteins (OMPs), and lipoproteins. Oxidative protein folding mediated by periplasmic oxidoreductases is required for the biogenesis of the protein components, mainly constituents of virulence determinants such as pili, flagella, and toxins, of the Gram-negative OM. Recently, periplasmic oxidoreductases have been implicated in LPS biogenesis of Escherichia coli and Neisseria meningitidis. Differences in OM biogenesis, in particular the transport pathways for endotoxin to the OM, the composition and role of the protein oxidation, and isomerization pathways and the regulatory networks that control them have been found in these two Gram-negative species suggesting that although form and function of the OM is conserved, the pathways required for the biosynthesis of the OM and the regulatory circuits that control them have evolved to suit the lifestyle of each organism. PMID:23267440

Toward an understanding of "Legacy P" - phosphorus sorption mechanisms in stream sediments as influenced by organic matter

NASA Astrophysics Data System (ADS)

Audette, Yuki; O'Halloran, Ivan P.; Nowell, Peter M.; Congreves, Katelyn; Voroney, R. Paul

2017-04-01

Water chemistry and phosphorus (P) forms were analyzed to determine the nature of legacy P in sediments of the West Holland River and the adjacent drainage canals of the Holland Marsh drainage system, located in southern Ontario, Canada. The river and canals route water from the intensively cropped muck polders of the Holland Marsh and drain Lake Simcoe. Sediment samples were characterized for mineralogy using X-ray diffraction techniques (XRD); total P (TP); and Ca, Fe, Mn, and Mg contents, as well as cation exchange capacity and organic matter (OM) content. Forms of sediment P in five depth sections (ranging from 0-15 cm depth) were characterized and quantified by sequential P fractionation chemistry. At all study sites, mobile P forms including organic P forms were found to be higher in surface sediments than in deeper sediments. The major P form within the sediments of the two canal sites, where the concentration of TP in the surface water was within the Ontario Provincial Water Quality Objectives (PWQO) of 0.03 mg P L-1, was Ca-bound P, indicating a low risk of soluble reactive P (SRP) release. A trace of apatite (a stable Ca-P mineral) was also detected in these sediments. Conversely, sediments collected from the West Holland River at sites located within the Holland Marsh exhibited a high risk of SRP release, and redox-sensitive P was the dominant P form in the sediment despite the surface water exhibiting higher concentration of Ca and alkaline pH. In addition, the concentrations of TP as measured in surface water samples taken from the site were 8 times greater than PWQO. In the sediments where the risk of SRP release was high, OM contents were also relatively high and traces of brushite (a labile Ca-P mineral) were detected. The formation of OM and cation complexes, such as OM-Fe complexes, may play an important role in regulating the fate of sediment-P forms through the adsorption of SRP. These OM-Fe complexes may inhibit the formation of more stable Ca-P minerals, even under neutral to alkaline conditions. Thus, where OM-Fe-P forms predominate, we predict a high risk of SRP release from sediments when water chemistry changes. In addition, OM may inhibit the transformation of labile Ca-P forms to more stable Ca-P minerals. Loading of OM affects the development of hypoxia in aquatic systems, and the accumulation of OM can promote the release of both SRP and dissolved organic C to downstream environments. This study provides evidence that the presence of OM in stream sediments influences P sorption mechanisms and is critical in understanding P biogeochemistry in freshwater environments.

Redox effects on the microbial degradation of refractory organic matter in marine sediments

NASA Astrophysics Data System (ADS)

Reimers, Clare E.; Alleau, Yvan; Bauer, James E.; Delaney, Jennifer; Girguis, Peter R.; Schrader, Paul S.; Stecher, Hilmar A.

2013-11-01

Microbially mediated reduction-oxidation (redox) reactions are often invoked as being the mechanisms by which redox state influences the degradation of sedimentary organic matter (OM) in the marine environment. To evaluate the effects of elevated, oscillating and reduced redox potentials on the fate of primarily aged, mineral-adsorbed OM contained in continental shelf sediments, we used microbial fuel cells to control redox state within and around marine sediments, without amending the sediments with reducing or oxidizing substances. We subsequently followed electron fluxes in the redox elevated and redox oscillating treatments, and related sediment chemical, isotopic and bacterial community changes to redox conditions over a 748-day experimental period. The electron fluxes of the elevated and oscillating redox cells were consistent with models of organic carbon (OC) oxidation with time-dependent first-order rate constants declining from 0.023 to 0.005 y-1, in agreement with rate constants derived from typical OC profiles and down core ages of offshore sediments, or from sulfate reduction rate measurements in similar sediments. Moreover, although cumulative electron fluxes were higher in the continuously elevated redox treatment, incremental rates of electron harvesting in the two treatments converged over the 2 year experiment. These similar rates were reflected in chemical indicators of OM metabolism such as dissolved OC and ammonia, and particulate OC concentrations, which were not significantly different among all treatments and controls over the experimental time-scale. In contrast, products of carbonate and opal dissolution and metal mobilization showed greater enrichments in sediments with elevated and oscillating redox states. Microbial community composition in anode biofilms and surrounding sediments was assessed via high-throughput 16S rRNA gene sequencing, and these analyses revealed that the elevated and oscillatory redox treatments led to the enrichment of Deltaproteobacteria on the sediment-hosted anodes over time. Many Deltaproteobacteria are capable of using electrodes as terminal electron acceptors to completely oxidize organic substrates. Notably, Deltaproteobacteria were not measurably enriched in the sediments adjacent to anodes, suggesting that - in these experiments - electron-shuttling bacterial networks did not radiate out away from the electrodes, affecting millimeters or centimeters of sediment. Rather, microbial phylotypes allied to the Clostridia appeared to dominate in the sediment amongst all treatments, and likely played essential roles in converting complex dissolved and particulate sources of OM to simple fermentation products. Thus, we advance that the rate at which fermentation products are generated and migrate to oxidation fronts is what limits the remineralization of OM in many subsurface sediments removed from molecular oxygen. This is a diagenetic scenario that is consistent with the discharging behavior of redox oscillating sediment MFCs. It is also compatible with hypotheses that molecular O2 - and not just the resulting elevated redox potential - may be required to effectively catalyze the degradation of refractory OM. Such decomposition reactions have been suggested to depend on substrate interactions with highly reactive oxygen-containing radicals and/or with specialized extracellular enzymes produced by aerobic prokaryotic or eukaryotic cells.

Thermodynamic constrains on the flux of organic matter through a peatland ecosystem

NASA Astrophysics Data System (ADS)

Worrall, Fred; Moody, Catherine; Clay, Gareth; Kettridge, Nick; Burt, Tim

2017-04-01

The transformations and transitions of organic matter into, through and out of a peatland ecosystem must obey the 2nd law of thermodynamics. Beer and Blodau (Geochimica Cosmochimica Acta, 2007, 71, 12, 2989-3002) showed that the evolution of CH4 in peatlands was constrained by equilibrium occurring at depth in the peat as the pore water became a closed system. However, that study did not consider the transition in the solid components of the organic matter flux through the entire ecosystem. For this study, organic matter samples were taken from each organic matter reservoir and fluvial transfer pathway and analysed the samples by elemental analysis and bomb calorimetry. The samples analysed were: above- and below-ground biomass, heather, mosses, sedges, plant litter layer, peat soil, and monthly samples of particulate and dissolved organic matter. All organic matter samples were taken from a 100% peat catchment within Moor House National Nature Reserve in the North Pennines, UK, and collected samples were compared to standards of lignin, cellulose, and plant protein. It was possible to calculate ∆H_f^OM ∆S_f^OM and ∆G_f^OM for each of the samples and standards. By assuming that each thermodynamic property can be expressed per g C and that any increase in ∆G_f^OM can be balanced by the production of CO2, DOM or CH4 then it is possible to predict the consequences of the fixation of 1 g of carbon in a peatland soil. The value of ∆G_f^OMincreases from glucose to components of the biomass: 1g of C fixed as glucose by photosynthesis would result in 0.68 g C as biomass and 0.32 g C as CO2. The transition from biomass to litter could occur spontaneously but the transition from surface to 1m depth in the peat profile would release 0.18 g C as CO2 per 1 g of carbon entering the peat profile. Therefore, for every 1 g of carbon fixed from photosynthesis then 0.44g of C would be released as CO2 and 0.54 g C would be present at 1 m depth. Alternatively, if DOM only were released in transition down the peat profile then for every 1 g of carbon fixed by photosynthesis 0.32 g C would be released as CO2 and 0.22 g C would be lost as DOM and leaving 0.46 g C as residual peat at 1m depth. If the variation in ∆G_f^OM of the DOM were considered then for every 1 g of C produced as DOM then between 0 and 0.57g C would be lost as CO2. At median value of DOM loss then for every 1g of carbon fixed as photosynthesis 0.39 g C would be lost as CO2 and 0.15 g lost as DOM with 0.46 g C as residual peat. Alternatively, if CH4 only were released down the soil profile then no organic matter would be left in the peat profile, i.e. CH4 is not an efficient method of transferring Gibbs free energy. The measured carbon budget for this catchment is that 1 g C fixed as photosynthesis resulted in 0.42 g C as CO2; 0.29 g C as DOM; 0.04 g C as CH4 and 0.24 g C as residual peat at 1m depth.

Influence of biochar on heavy metals and microbial community during composting of river sediment with agricultural wastes.

PubMed

Chen, Yaoning; Liu, Yao; Li, Yuanping; Wu, Yanxin; Chen, Yanrong; Zeng, Guangming; Zhang, Jiachao; Li, Hui

2017-11-01

Studies were performed to evaluate influence of biochar addition on physico-chemical process, heavy metals transformation and bacterial community diversity during composting of sediment with agricultural wastes. Simultaneously, the relationships between those parameters including heavy metals and bacterial community compositions were evaluated by redundancy analysis (RDA). The results show that the extraction efficiency of DTPA extractable heavy metals decreased in both piles, and reduced more in pile with biochar addition about 0.1-2.96%. Biochar addition dramatically influenced the bacterial community structure during the composting process. Moreover, the bacterial community composition was significantly correlated with C/N ratio, water soluble carbon (WSC), and organic matter (OM) (P<0.05) in pile with biochar addition; while significantly correlated with temperature, WSC, and C/N ratio in pile which was free of biochar. This study would provide some valuable information for improving the composting for disposal of river sediment with heavy metals contamination. Copyright © 2017 Elsevier Ltd. All rights reserved.

Dust episodes in Beirut and their effect on the chemical composition of coarse and fine particulate matter.

PubMed

Jaafar, Malek; Baalbaki, Rima; Mrad, Raya; Daher, Nancy; Shihadeh, Alan; Sioutas, Constantinos; Saliba, Najat A

2014-10-15

Particles captured during dust episodes in Beirut originated from both the African and Arabian deserts. This particular air mixture showed an increase, over non-dust episodes, in particle volume distribution which was mostly noticed for particles ranging in sizes between 2.25 and 5 μm. It also resulted in an increase in average mass concentration by 48.5% and 14.6%, for the coarse and fine fractions, respectively. Chemical analysis of major aerosol components accounted for 93% of fine PM and 71% of coarse PM. Crustal material (CM) dominated the coarse PM fraction, contributing to 39 ± 15% of the total mass. Sea salt (SS) (11 ± 10%) and secondary ions (SI) (11 ± 7%) were the second most abundant elements. In the fine fraction, SI (36 ± 14%) were the most abundant PM constituent, followed by organic matter (OM) (33 ± 7%) and CM (13 ± 2%). Enrichment factors (EF) and correlation coefficients show that biogenic and anthropogenic sources contribute to the elemental composition of particles during dust episodes. This study emphasizes on the role played by the long-range transport of aerosols in changing the chemical composition of the organic and inorganic constituents of urban coarse and fine PM. The chemical reactions between aged urban and dust aerosols are enhanced during transport, leading to the formation of organo-nitrogenated and -sulfonated compounds. Their oligomeric morphologies are further confirmed by SEM-EDX measurements. Copyright © 2014 Elsevier B.V. All rights reserved.

Aerosol chemical composition and light scattering during a winter season in Beijing

NASA Astrophysics Data System (ADS)

Tao, Jun; Zhang, Leiming; Gao, Jian; Wang, Han; Chai, Faihe; Wang, Shulan

2015-06-01

To evaluate PM2.5 contributions to light scattering under different air pollution levels, PM2.5 and its major chemical components, PM10, size-segregated water-soluble ions, and aerosol scattering coefficient (bsp) under dry conditions were measured at an urban site in Beijing in January 2013 when heavy pollution events frequently occurred. Measurements were categorized into three pollution levels including heavy-polluted (Air Quality Index (AQI) ≥ 200), light-polluted (200 > AQI ≥ 100) and clean periods (AQI < 100). The average PM2.5 mass concentration was 248 μg m-3 during the heavy-polluted period, which was 2.4 and 5.6 times of those during the light-polluted (104 μg m-3) and clean (44 μg m-3) periods, respectively. The concentrations of SO42-, NO3- and NH4+ increased much more than those of OC and EC during the heavy-polluted period compared with those during the light-polluted and clean periods. Good correlations between PM2.5 and bsp were found (R2 > 0.95) during the different pollution levels. The mass scattering efficiency (MSE) of PM2.5 was 4.9 m2 g-1 during the heavy-polluted period, which was higher than those during the light-polluted (4.3 m2 g-1) and clean periods (3.6 m2 g-1). To further evaluate the impact of individual chemical components of PM2.5 on light scattering, a multiple linear regression equation of measured bsp against the mass concentration of (NH4)2SO4, NH4NO3, Organic Matter (OM), EC, Fine Soil (FS), Coarse Matter (CM) and Other chemical compounds were performed. (NH4)2SO4, NH4NO3 and OM were the dominant species contributing to bsp under both dry and ambient conditions. OM contributed more to bsp than the sum of (NH4)2SO4 and NH4NO3 did under the dry condition during all the pollution periods and this was also the case under the ambient condition during the light-polluted and clean periods. However, the total contributions of (NH4)2SO4 and NH4NO3 to bsp under the ambient condition was 55%, much more than the 29% contribution from OM during the heavy-polluted period. High (NH4)2SO4 and NH4NO3 concentrations and their hygroscopicity were the main reasons causing visibility degradation during the heavy-polluted period, and the effect can be enhanced under high RH conditions.

Weight gain in mice on a high caloric diet and chronically treated with omeprazole depends on sex and genetic background.

PubMed

Saqui-Salces, Milena; Tsao, Amy C; Gillilland, Merritt G; Merchant, Juanita L

2017-01-01

The impact of omeprazole (OM), a widely used over-the-counter proton pump inhibitor, on weight gain has not been extensively explored. We examined what factors, e.g., diet composition, microbiota, genetic strain, and sex, might affect weight gain in mice fed a high caloric diet while on OM. Inbred C57BL/6J strain, a 50:50 hybrid (B6SJLF1/J) strain, and mice on a highly mixed genetic background were fed four diets: standard chow (STD, 6% fat), STD with 200 ppm OM (STD + O), a high-energy chow (HiE, 11% fat), and HiE chow with OM (HiE + O) for 17 wk. Metabolic analysis, body composition, and fecal microbiota composition were analyzed in C57BL/6J mice. Oral glucose tolerance tests were performed using mice on the mixed background. After 8 wk, female and male C57BL/6J mice on the HiE diets ate less, whereas males on the HiE diets compared with the STD diets gained weight. All diet treatments reduced energy expenditure in females but in males only those on the HiE + O diet. Gut microbiota composition differed in the C57BL/6J females but not the males. Hybrid B6SJLF1/J mice showed similar weight gain on all test diets. In contrast, mixed strain male mice fed a HiE + O diet gained ∼40% more weight than females on the same diet. In addition to increased weight gain, mixed genetic mice on the HiE + O diet cleared glucose normally but secreted more insulin. We concluded that sex and genetic background define weight gain and metabolic responses of mice on high caloric diets and OM. Copyright © 2017 the American Physiological Society.

The Impact of Organo-Mineral Complexation on Mineral Weathering in the Soil Zone under Unsaturated Conditions

NASA Astrophysics Data System (ADS)

Michael, H. A.; Tan, F.; Yoo, K.; Imhoff, P. T.

2017-12-01

While organo-mineral complexes can protect organic matter (OM) from biodegradation, their impact on soil mineral weathering is not clear. Previous bench-scale experiments that focused on specific OM and minerals showed that the adsorption of OM to mineral surfaces accelerates the dissolution of some minerals. However, the impact of natural organo-mineral complexes on mineral dissolution under unsaturated conditions is not well known. In this study, soil samples prepared from an undisturbed forest site were used to determine mineral weathering rates under differing conditions of OM sorption to minerals. Two types of soil samples were generated: 1) soil with OM (C horizon soil from 84-100cm depth), and 2) soil without OM (the same soil as in 1) but with OM removed by heating to 350°for 24 h). Soil samples were column-packed and subjected to intermittent infiltration and drainage to mimic natural rainfall events. Each soil sample type was run in duplicate. The unsaturated condition was created by applying gas pressure to the column, and the unsaturated chemical weathering rates during each cycle were calculated from the effluent concentrations. During a single cycle, when applying the same gas pressure, soils with OM retained more moisture than OM-removed media, indicating increased water retention capacity under the impact of OM. This is consistent with the water retention data measured by evaporation experiments (HYPROP) and the dew point method (WP4C Potential Meter). Correspondingly, silicon (Si) denudation rates indicated that dissolution of silicate minerals was 2-4 times higher in OM soils, suggesting that organo-mineral complexes accelerate mineral dissolution under unsaturated conditions. When combining data from all cycles, the results showed that Si denudation rates were positively related to soil water content: denundation rate increased with increasing water content. Therefore, natural mineral chemical weathering under unsaturated conditions, while widely considered to be facilitated by biological and chemical activities, may also be affected by soil retention properties.

Ozonation effects on emerging micropollutants and effluent organic matter in wastewater: characterization using changes of three-dimensional HP-SEC and EEM fluorescence data.

PubMed

Liu, Chen; Li, Penghui; Tang, Xiangyu; Korshin, Gregory V

2016-10-01

The degradation of effluent organic matter (EfOM) in a municipal wastewater treated by ozonation was characterized using the methods of high-performance size-exclusion chromatography (HP-SEC) and excitation/emission matrix (EEM) fluorescence combined with parallel factor analysis (PARAFAC). The removal of 40 diverse trace-level contaminants of emerging concern (CEC) present in the wastewater was determined as well. Ozonation caused a rapid decrease of the absorbance and fluorescence of the wastewater, which was associated primarily with the oxidation of high and low apparent molecular weight (AMW) EfOM fractions. PARAFAC analysis also showed that components C1 and C2 decreased prominently in these conditions. The EfOM fraction of intermediate molecular weight ascribable to a terrestrial humic-like component (C3) tended to be less reactive toward ozone. Relative changes of EEM fluorescence were quantified using F max values of PARAFAC-identified components (∆F/F 0 max ). Unambiguous relationships between ∆F/F 0 max values and the extent of the degradation of the examined CECs (∆C/C 0 ) were established. This allowed correlating main parameters of the ∆C/C 0 vs. ∆F/F 0 max relationships with the rates of oxidation of these CECs. The results demonstrate the potential of online measurements of EEM fluorescence for quantitating effects of ozonation on EfOM and micropollutants in wastewater effluents.

In vitro fermentation characteristics of diets with different forage/concentrate ratios: comparison of rumen and faecal inocula.

PubMed

Zicarelli, Fabio; Calabrò, Serena; Cutrignelli, Monica I; Infascelli, Federico; Tudisco, Raffaella; Bovera, Fulvia; Piccolo, Vincenzo

2011-05-01

The aim of this trial was to evaluate the replacement of rumen fluid with faeces as inoculum in studying the in vitro fermentation characteristics of diets for ruminants using the in vitro gas production technique. Six iso-protein diets with different forage/concentrate ratios were incubated with rumen fluid (RI) or faeces (FI) collected from sheep. Most of the fermentation parameters were influenced by diet and inoculum (P < 0.01). With both inocula, organic matter degradability (dOM), cumulative gas production (OMCV) and maximum fermentation rate (R(max) ) increased as the amount of concentrate in the diet increased. R(max) was lower with FI vs RI (P < 0.01); dOM was higher with FI vs RI and the diet × inoculum interaction was significant. As expected, with both inocula, R(max) increased as the neutral detergent fibre content of the diet decreased. Significant correlations were obtained using both inocula between OMCV/dOM and gas/volatile fatty acid (VFA), while the correlation VFA/dOM was significant only with FI. The microbial biomass yield calculated by stoichiometric analysis for all diets was higher with FI vs RI. With FI the organic matter used for microbial growth showed an overall decreasing trend as the amount of concentrate in the diet increased. The results indicate that both faeces and rumen fluid from sheep have the potential to be used as inoculum for the in vitro gas production technique. Copyright © 2011 Society of Chemical Industry.

Silage or fresh by-product of peach palm as roughage in the feeding of lambs.

PubMed

dos Santos Cabral, Ícaro; Azevêdo, José Augusto Gomes; de Almeida, Flávio Moreira; Pereira, Luiz Gustavo Ribeiro; de Araújo, Gherman Garcia Leal; Nogueira, Abdon Santos; Souza, Lígia Lins; de Oliveira, Gisele Andrade; de Oliveira Filho, Carlos Alberto Alves

2015-03-01

The objective of this study was to evaluate intake and apparent digestibility of agro-industrial by-product of peach palm in diets for lambs. Twenty castrated, crossbred Santa Ines lambs, with average age of 150 days and body weight of 22.4 ± 3.4 kg, were distributed in a completely randomized design with four experimental diets composed of the following: fresh by-product of peach palm enriched with urea + ammonia sulfate (FU); fresh peach palm by-product + concentrate (FP); silage of peach palm by-product + concentrate (SP); and silage of peach palm by-product enriched with 15% of cornmeal + concentrate (SPC). Intake was recorded daily, and the digestibility coefficients were estimated with the internal marker indigestible acid detergent fiber (iADF). Diet FU resulted in the lowest intake and digestibility of the nutrients evaluated. Animals receiving diet FP showed higher intakes of dry matter (DM), organic matter (OM), crude protein (CP), neutral detergent fiber (NDF), total digestible nutrients (TDN), and digestible energy (DE) in relation to animals fed diets SP and SPC. Diets SP and SPC showed higher coefficients of digestibility of DM, OM, CP, and NDF than diet FP. Diet SP reduced the intakes of DM, OM, ether extract (EE), non-fibrous carbohydrate (NFC), TDN, and DE and the digestibility coefficients of DM, OM, and NFC as compared with diet SPC. Feedlot lambs fed a diet with fresh peach palm by-product + concentrate (diet FP) have higher nutrient intake.

Direct visualization of clay microfabric signatures driving organic matter preservation in fine-grained sediment

NASA Astrophysics Data System (ADS)

Curry, Kenneth J.; Bennett, Richard H.; Mayer, Lawrence M.; Curry, Ann; Abril, Maritza; Biesiot, Patricia M.; Hulbert, Matthew H.

2007-04-01

We employed direct visualization of organic matter (OM) sequestered by microfabric signatures in organo-clay systems to study mechanisms of OM protection. We studied polysaccharides, an abundant class of OM in marine sediments, associated with the nano- and microfabric of clay sediment using a novel application of transmission electron microscopy, histochemical staining (periodic acid-thiosemicarbazide-silver proteinate), and enzymatic digestion techniques. We used two experimental organo-clay sediment environments. First, laboratory-consolidated sediment with 10% chitin (w/w) added was probed for chitin before and after digestion with chitinase. Second, fecal pellets from the polychaete Heteromastus filiformis were used as a natural environment rich in clay and polysaccharides. Sections of this material were probed with silver proteinate for polysaccharides before and after digestion with a mixture of enzymes (amylase, cellulase, chitinase, dextranase, and pectinase). In both environments, chitin or other polysaccharides were found within pores, bridging clay domains, and attached to clay surfaces in undigested samples. Digested samples showed chitin or polysaccharides more closely associated with clay surfaces and in small pores. Our results imply protective roles for both sorption to clay surfaces and encapsulation within clay microfabric signatures.

Amounts, isotopic character, and ages of organic and inorganic carbon exported from rivers to ocean margins: 2. Assessment of natural and anthropogenic controls

NASA Astrophysics Data System (ADS)

Hossler, Katie; Bauer, James E.

2013-04-01

Riverine exports of carbon (C) and organic matter (OM) are regulated by a variety of natural and anthropogenic factors. Understanding the relationships between these various factors and C and OM exports can help to constrain global C budgets and allow assessment of current and future anthropogenic impacts on both riverine and global C cycles. We quantified the effects of multiple natural and anthropogenic controls on riverine export fluxes and compositions of particulate organic C, dissolved organic C, and dissolved inorganic C for a regional group of eight rivers in the northeastern U.S. Potential controls related to hydrogeomorphology and regional climate, soil order, soil texture, bedrock lithology, land use, and anthropogenic factors were analyzed individually, collectively, and at scales of both local and regional influence. Factors related to hydrogeomorphology and climate, followed in importance by land use and anthropogenic factors, exhibited the strongest impacts on riverine C exports and compositions, particularly at smaller localized scales. The effects of hydrogeomorphology and climate were primarily related to volumetric flow, which resulted in greater exports of terrestrial and total C. Principal anthropogenic factors included impacts of wastewater treatment plants (WWTPs) and river impoundments. The presence of WWTPs as well as anthropogenic use of carbonate-based materials (e.g., limestone) may have substantially increased riverine C exports, particularly fossil C exports, in the study region. The presence of nuclear power plants in the associated watersheds is also discussed because of the potential for anthropogenic 14C inputs and subsequent biasing of aquatic C studies utilizing natural abundance 14C.

Influence of collector surface composition and water chemistry on the deposition of cerium dioxide nanoparticles: QCM-D and column experiment approaches.

PubMed

Liu, Xuyang; Chen, Gexin; Su, Chunming

2012-06-19

The deposition behavior of cerium dioxide (CeO(2)) nanoparticles (NPs) in dilute NaCl solutions was investigated as a function of collector surface composition, pH, ionic strength, and organic matter (OM). Sensors coated separately with silica, iron oxide, and alumina were applied in quartz crystal microbalance with dissipation (QCM-D) to examine the effect of these mineral phases on CeO(2) deposition in NaCl solution (1-200 mM). Frequency and dissipation shift followed the order: silica > iron oxide > alumina in 10 mM NaCl at pH 4.0. No significant deposition was observed at pH 6.0 and 8.5 on any of the tested sensors. However, ≥ 94.3% of CeO(2) NPs deposited onto Ottawa sand in columns in 10 mM NaCl at pH 6.0 and 8.5. The inconsistency in the different experimental approaches can be mainly attributed to NP aggregation, surface heterogeneity of Ottawa sand, and flow geometry. In QCM-D experiments, the deposition kinetics was found to be qualitatively consistent with the predictions based on the classical colloidal stability theory. The presence of low levels (1-6 mg/L) of Suwannee River humic acid, fulvic acid, alginate, citric acid, and carboxymethyl cellulose greatly enhanced the stability and mobility of CeO(2) NPs in 1 mM NaCl at pH 6.5. The poor correlation between the transport behavior and electrophoretic mobility of CeO(2) NPs implies that the electrosteric effect of OM was involved.

Mercury transformations in resuspended contaminated sediment controlled by redox conditions, chemical speciation and sources of organic matter

NASA Astrophysics Data System (ADS)

Zhu, Wei; Song, Yu; Adediran, Gbotemi A.; Jiang, Tao; Reis, Ana T.; Pereira, Eduarda; Skyllberg, Ulf; Björn, Erik

2018-01-01

Mercury (Hg) contaminated sediments can be significant sources of Hg in aquatic ecosystems and, through re-emission processes, to the atmosphere. Transformation and release of Hg may be enhanced by various sediment perturbation processes, and controlling biogeochemical factors largely remain unclear. We investigated how rates of Hg transformations in pulp-fiber enriched sediment contaminated by Hg from chlor-alkali industry were controlled by (i) transient redox-changes in sulfur and iron chemistry, (ii) the chemical speciation and solubility of Hg, and (iii) the sources and characteristics of organic matter (OM). Sediment-bottom water microcosm systems were exposed to four combinations of air and nitrogen gas for a total time of 24 h. The treatments were: 24 h N2, 0.5 h air + 23.5 h N2, 4 h air + 20 h N2 and 24 h of air exposure. As a result of these treatments, microcosms spanned a wide range of redox potential, as reflected by the dissolved sulfide concentration range of ≤0.3-97 μM. Four different chemical species of inorganic divalent Hg (HgII) and methyl mercury (MeHg), enriched in different Hg isotope tracers, were added to the microcosms: 201Hg(NO3)2(aq), 202HgII adsorbed to OM (202HgII-OM(ads)), 198HgII as microcrystalline metacinnabar (β-198HgS(s)) and Me204HgCl(aq). Microcosm systems were composed of bottom water mixed with sediment taken at 0-2, 0-5 and 0-10 cm depth intervals. The composition of OM varied with sediment depth such that compared to deeper sediment, the 0-2 cm depth-interval had a 2-fold higher contribution of labile OM originating from algal and terrestrial inputs, serving as metabolic electron-donors for microorganisms. The potential methylation rate constant (kmeth) of Hg tracers and net formation of ambient MeHg (MeHg/THg molar ratio) increased up to 50% and 400%, respectively at intermediate oxidative conditions, likely because of an observed 2-fold increase in sulfate concentration stimulating the activity of sulfate reducing bacteria with a capability of methylating HgII. Due to differences in HgII water-sediment partitioning, kmeth varied by a factor of 11-70 for the different isotope-enriched Hg tracers. The chemical form of HgII was a major controlling factor for kmeth and its response to the resuspension-oxidation of the system. The β-198HgS(s) tracer had the lowest kmeth and it was mainly constrained by redox-driven HgII solubility. The 202HgII-OM(ads) tracer showed an intermediate value on kmeth. It was controlled by both HgII solubility and availability of electron donors and acceptors, regulating bacterial activity. The 201Hg(NO3)2(aq) tracer had the highest value on kmeth which was limited mainly by bacterial activity. The kmeth was up to a factor of 3 higher in the 0-2 cm sediment depth-interval than in 0-5 and 0-10 cm intervals due to a larger contribution of labile OM in the 0-2 cm sediment. Reduction of HgII to Hg0 followed by volatilization exclusively occurred at high sulfidic conditions in the top 0-2 cm sediment. Aromatic moieties of terrestrial OM, present mainly in the top sediment, is suggested to control the reduction of HgII. The Hg0 volatilization rate constant for the 202HgII-OM(ads) tracer exceeded that for β-198HgS(s) by one order of magnitude. Our results suggest that contaminated sediments posing a high risk for reactivation of legacy Hg following transient redox resuspension events are characterized by depletion of sulfate in the sediment porewater prior to resuspension, predominance of HgII species with solubility exceeding that of crystalline β-HgS(s), and conditions promoting in situ formation and/or import of labile OM from algal and terrestrial sources.

Method for removing soot from exhaust gases

DOE Office of Scientific and Technical Information (OSTI.GOV)

Suib, Steven L.; Dharmarathna, D. A. Saminda; Pahalagedara, Lakshitha R.

A method for oxidizing soot from diesel exhaust gas from a diesel engine. The method involves providing a diesel particulate filter for receiving the diesel exhaust gas; coating a catalyst composition on the diesel particulate filter; and contacting the soot from the diesel exhaust gas with the catalyst coated diesel particulate filter at a temperature sufficient to oxidize the soot to carbon dioxide. The catalyst composition is a doped or undoped manganese oxide octahedral molecular sieve (OMS-2) material. A diesel exhaust gas treatment system that includes a diesel particulate filter for receiving diesel exhaust gas from a diesel engine andmore » collecting soot; and a catalyst composition coated on the diesel particulate filter. The catalyst composition is a doped or undoped manganese oxide octahedral molecular sieve (OMS-2).« less

Alteration of organic matter during infaunal polychaete gut passage and links to sediment organic geochemistry. Part I: Amino acids

NASA Astrophysics Data System (ADS)

Woulds, Clare; Middelburg, Jack J.; Cowie, Greg L.

2012-01-01

Of the factors which control the quantity and composition of organic matter (OM) buried in marine sediments, the links between infaunal ingestion and gut passage and sediment geochemistry have received relatively little attention. This study aimed to use feeding experiments and novel isotope tracing techniques to quantify amino acid net accumulation and loss during polychaete gut passage, and to link this to patterns of selective preservation and decay in sediments. Microcosms containing either Arenicolamarina or Hediste (formerly Nereis) diversicolor were constructed from defaunated sediment and filtered estuarine water, and maintained under natural temperature and light conditions. They were fed with 13C-labelled diatoms daily for 8 days, and animals were transferred into fresh, un-labelled sediment after ∼20 days. Samples of fauna, microcosm sediment and faecal matter were collected after 8, ∼20 and ∼40 days, and analysed for their bulk isotopic signatures and 13C-labelled amino acid compositions. Bulk isotopic data showed that, consistent with their feeding modes, Hediste assimilated added 13C more quickly, and attained a higher labelling level than Arenicola. Both species retained the added 13C in their biomass even after removal from the food. A principal component analysis of 13C-labelled amino acid mole percentages showed clear differences in composition between the algae, faunal tissues, and sediment plus faecal matter. Further, the two species of polychaete showed different compositions in their tissues. The amino acids phenylalanine, valine, leucine, iso-leucine, threonine and proline showed net accumulation in polychaete tissues. Serine, methionine, lysine, aspartic and glutamic acids and tyrosine were rapidly lost through metabolism, consistent with their presence in easily digestible cell components (as opposed to cell walls which offer physical protection). All sample types (polychaete tissues, sediments and faecal matter) were enriched in labelled glycine. Possible mechanisms for this enrichment include accumulation through inclusion in tissues with long residence times, preferential preservation (i.e. selection against) during metabolism, production from other labelled amino acids during varied metabolic processes, and accumulation in refractory by-products of secondary bacterial production. Overall, similarities were observed between amino-acid decay patterns in faunated microcosms, afaunal controls, and those previously reported in marine sediments. Thus, while polychaete gut passage did produce compound-selective accumulation and losses of certain amino acids in polychaete tissues and faecal matter, the impact of polychaete gut passage on sediment organic geochemistry was difficult to deconvolve from microbial decay. Despite processing large volumes of organic matter, polychaetes may not have distinctive influence on sediment compositions, possibly because metabolic processes concerning amino acids may be broadly similar across a wide range of organisms.

Aerobic exercise training induces skeletal muscle hypertrophy and age-dependent adaptations in myofiber function in young and older men

PubMed Central

Konopka, Adam R.; Undem, Miranda K.; Hinkley, James M.; Minchev, Kiril; Kaminsky, Leonard A.; Trappe, Todd A.; Trappe, Scott

2012-01-01

To examine potential age-specific adaptations in skeletal muscle size and myofiber contractile physiology in response to aerobic exercise, seven young (YM; 20 ± 1 yr) and six older men (OM; 74 ± 3 yr) performed 12 wk of cycle ergometer training. Muscle biopsies were obtained from the vastus lateralis to determine size and contractile properties of isolated slow [myosin heavy chain (MHC) I] and fast (MHC IIa) myofibers, MHC composition, and muscle protein concentration. Aerobic capacity was higher (P < 0.05) after training in both YM (16 ± 2%) and OM (13 ± 3%). Quadriceps muscle volume, determined via MRI, was 5 ± 1 and 6 ± 1% greater (P < 0.05) after training for YM and OM, respectively, which was associated with an increase in MHC I myofiber cross-sectional area (CSA), independent of age. MHC I peak power was higher (P < 0.05) after training for both YM and OM, while MHC IIa peak power was increased (P < 0.05) with training in OM only. MHC I and MHC IIa myofiber peak and normalized (peak force/CSA) force were preserved with training in OM, while MHC I peak force/CSA and MHC IIa peak force were lower (P < 0.05) after training in YM. The age-dependent adaptations in myofiber function were not due to changes in protein content, as total muscle protein and myofibrillar protein concentration were unchanged (P > 0.05) with training. Training reduced (P < 0.05) the proportion of MHC IIx isoform, independent of age, whereas no other changes in MHC composition were observed. These data suggest relative improvements in muscle size and aerobic capacity are similar between YM and OM, while adaptations in myofiber contractile function showed a general improvement in OM. Training-related increases in MHC I and MHC IIa peak power reveal that skeletal muscle of OM is responsive to aerobic exercise training and further support the use of aerobic exercise for improving cardiovascular and skeletal muscle health in older individuals. PMID:22984247

Temperature and soil organic matter decomposition rates - synthesis of current knowledge and a way forward

Treesearch

Richard T. Conant; Michael Ryan; Goran I. Agren; Hannah E. Birge; Eric A. Davidson; Peter E. Eliasson; Sarah E. Evans; Serita D. Frey; Christian P. Giardina; Francesca M. Hopkins; Riitta Hyvonen; Miko U. F . Kirschbaum; Jocelyn M. Lavallee; Jens Leifeld; William J. Parton; Jessica Megan Steinweg; Matthew D. Wallenstein; J . A. Martin Wetterstedt; Mark A. Bradford

2011-01-01

The response of soil organic matter (OM) decomposition to increasing temperature is a critical aspect of ecosystem responses to global change. The impacts of climate warming on decomposition dynamics have not been resolved due to apparently contradictory results from field and lab experiments, most of which has focused on labile carbon with short turnover times. But...

Carbon to organic matter ratios for soils in Rocky Mountain coniferous forests

Treesearch

Theresa B. Jain; Russell T. Graham; David L. Adams

1997-01-01

Vegetation type, soils, climate, and conversion ratios influence estimates of terrestrial C. Our objectives were to (i) determine carbon to organic matter (C/OM) ratios for brown cubical rotten wood, litter, surface humus, soil wood, and mineral soils; (ii) evaluate the validity of using 0.58 and 0.50 ratios for estimating C in mineral and organic soil components,...

Biodegradation of organic matters from mixed unshredded municipal solid waste through air convection before landfilling.

PubMed

Mahar, Rasool B; Liu, Jianguo; Yue, Dongbei; Nie, Yongfeng

2007-01-01

Landfilling is a dominant municipal solid waste (MSW) disposal method in most developing countries. In China, approximately 85% of the generated MSW is being disposed of in the landfills. The amount of MSW is growing rapidly with the rate of approximately 8-10% annually, which contains a high quantity of moisture and organic matters. The problems of leachate treatment and landfill gas (LFG) emissions are increasing gradually. Reducing the hazard before emplacement, pretreatment of MSW before landfilling has become very important for the conventional landfill. In this study, aerobic pretreatment of mixed MSW was used, and much attention has been given to the natural convection of air in the mixed and unshredded MSW for bioconversion of organic matter (OM). This study is an attempt to investigate aerobic pretreatment suitability for the mixed and unshredded MSW at Beijing. A pilot-scale aerobic pretreatment simulator (APS) was developed at Beishen Shu Landfill in Beijing. To work out the biodegradation of the OM in the APS, fresh and pretreated MSW samples were collected and analyzed for OM, moisture content, temperature, chemical oxygen demand, total organic carbon, carbon, nitrogen, hydrogen, lignocelluloses, and biochemical methane potential at various stages of the pretreatment. Furthermore, results of the fresh and pretreated MSW are compared. Significant reduction in the observed parameters of the pretreated waste samples is observed. This work demonstrates that pretreatment is significantly effective in reducing the landfill emissions that is leachate and LFG.

Connecting marine productivity to sea-spray via microscale biological processes: phytoplancton demise and viral infection

NASA Astrophysics Data System (ADS)

Facchini, C.; O'Dowd, C. D. D.; Danovaro, R.

2015-12-01

The processes that link phytoplankton biomass and productivity to the organic matter enrichment in sea spray aerosol are far from being elucidated and modelling predictions remain highly uncertain at the moment. While some studies have asserted that the enrichment of OM in sea spray aerosol is independent on marine productivity, others, have shown significant correlation with phytoplankton biomass and productivity (Chl-a retrieved by satellites). We present here new results illustrating a clear link between OM mass-fraction enrichment in sea spray (OMss) and both phytoplankton-biomass and Net Primary Productivity (NPP). We suggest that the OM enrichment of sea spray through the demise of the bloom, driven by nanoscale biological processes (such as viral infections), which determine the release of celldebris, exudates and other colloidal material. This OM, through processes, leads to enrichment in sea-spray, thus demonstrating an important coupling between biologically-drive plankton bloom termination, marine productivity and sea-spraymodification with potentially significant climate impacts.

Use of black soldier fly larvae (Hermetia illucens) to substitute soybean meal in ruminant diet: An in vitro rumen fermentation study

PubMed Central

Jayanegara, Anuraga; Novandri, Briliannanda; Yantina, Nover; Ridla, Muhammad

2017-01-01

Aim: This experiment aimed to evaluate substitution of soybean meal (SBM) by black soldier fly (BSF) larvae meal in a napier grass diet as performed by an in vitro rumen fermentation system. Materials and Methods: Samples of napier grass, SBM, and BSF larvae age 1 week (BSF1) and 2 weeks (BSF2) were arranged according to the following dietary treatments (dry matter [DM] basis): T1, 100% napier grass; T2, 60% napier grass + 40% SBM; T3, 60% napier grass + 40% BSF1; T4, 60% napier grass + 40% BSF2; T5, 60% napier grass + 20% SBM + 20% BSF1; and T6, 60% napier grass + 20% SBM + 20% BSF2. The samples were determined for their chemical composition and were incubated in vitro using buffered rumen fluid for 48 h at 39°C. In vitro incubation was carried out in three runs and represented by two incubation bottles per run. Results: Supplementation of BSF, both BSF1 and BSF2, increased ether extract, neutral- and acid-detergent insoluble crude protein contents of T3-T6 diets. The T3 or T4 diet resulted in lower ruminal ammonia concentration, in vitro DM digestibility, and in vitro organic matter (OM) digestibility as compared to those in T2 (p<0.05). Diet supplemented with BSF produced lower methane emission in comparison to that of supplemented with SBM (p<0.05). Diet containing BSF2 produced lower methane and methane per digestible OM than that containing BSF1 (p<0.05). Conclusion: Substitution of SBM by BSF in ruminant diet results in a lower nutritional value in vitro but with an advantage of lowering ruminal methane emission. PMID:29391684

Chemical characteristics of size-resolved aerosols in winter in Beijing.

PubMed

Sun, Kang; Qu, Yu; Wu, Qiong; Han, Tingting; Gu, Jianwei; Zhao, Jingjing; Sun, Yele; Jiang, Qi; Gao, Ziqi; Hu, Min; Zhang, Yuanhang; Lu, Keding; Nordmann, Stephan; Cheng, Yafang; Hou, Li; Ge, Hui; Furuuchi, Masami; Hata, Mitsuhiko; Liu, Xingang

2014-08-01

Size-resolved aerosols were continuously collected by a Nano Sampler for 13 days at an urban site in Beijing during winter 2012 to measure the chemical composition of ambient aerosol particles. Data collected by the Nano Sampler and an ACSM (Aerodyne Aerosol Chemical Speciation Monitor) were compared. Between the data sets, similar trends and strong correlations were observed, demonstrating the validity of the Nano Sampler. PM₁₀ and PM₂.₅ concentrations during the measurement were 150.5 ± 96.0 μg/m³ (mean ± standard variation) and 106.9 ± 71.6 μg/m³, respectively. The PM₂.₅/PM₁₀ ratio was 0.70 ± 0.10, indicating that PM₂.₅ dominated PM₁₀. The aerosol size distributions showed that three size bins of 0.5-1, 1-2.5 and 2.5-10 μm contributed 21.8%, 23.3% and 26.0% to the total mass concentration (TMC), respectively. OM (organic matter) and SIA (secondary ionic aerosol, mainly SO₄(2-), NO₃(-) and NH₄(+)) were major components of PM₂.₅. Secondary compounds (SIA and secondary organic carbon) accounted for half of TMC (about 49.8%) in PM₂.₅, and suggested that secondary aerosols significantly contributed to the serious particulate matter pollution observed in winter. Coal burning, biomass combustion, vehicle emissions and SIA were found to be the main sources of PM₂.₅. Mass concentrations of water-soluble ions and undetected materials, as well as their fractions in TMC, strikingly increased with deteriorating particle pollution conditions, while OM and EC (elemental carbon) exhibited different variations, with mass concentrations slightly increasing but fractions in TMC decreasing. Copyright © 2014. Published by Elsevier B.V.

Effect of soil organic matter content and pH on the toxicity of ZnO nanoparticles to Folsomia candida.

PubMed

Waalewijn-Kool, Pauline L; Rupp, Svenja; Lofts, Stephen; Svendsen, Claus; van Gestel, Cornelis A M

2014-10-01

Organic matter (OM) and pH may influence nanoparticle fate and effects in soil. This study investigated the influence of soil organic matter content and pH on the toxicity of ZnO-NP and ZnCl2 to Folsomia candida in four natural soils, having between 2.37% and 14.7% OM and [Formula: see text] levels between 5.0 and 6.8. Porewater Zn concentrations were much lower in ZnO-NP than in ZnCl2 spiked soils, resulting in higher Freundlich sorption constants for ZnO-NP. For ZnCl2 the porewater Zn concentrations were significantly higher in less organic soils, while for ZnO-NP the highest soluble Zn level (23mgZn/l) was measured in the most organic soil, which had the lowest pH. Free Zn(2+) ion concentrations were higher for ZnCl2 than for ZnO-NP and were greatly dependent on pH (pHpw) and dissolved organic carbon content of the pore water. The 28-d EC50 values for the effect of ZnCl2 on the reproduction of F. candida increased with increasing OM content from 356 to 1592mgZn/kg d.w. For ZnO-NP no correlation between EC50 values and OM content was found and EC50 values ranged from 1695 in the most organic soil to 4446mgZn/kg d.w. in the higher pH soil. When based on porewater and free Zn(2+) concentrations, EC50 values were higher for ZnCl2 than for ZnO-NP, and consistently decreased with increasing pHpw. This study shows that ZnO-NP toxicity is dependent on soil properties, but is mainly driven by soil pH. Copyright © 2014 Elsevier Inc. All rights reserved.

Quantitative structure property relationships for the adsorption of pharmaceuticals onto activated carbon.

PubMed

Dickenson, E R V; Drewes, J E

2010-01-01

Isotherms were determined for the adsorption of five pharmaceutical residues, primidone, carbamazepine, ibuprofen, naproxen and diclofenac, to Calgon Filtrasorb 300 powdered activated carbon (PAC). The sorption behavior was examined in ultra-pure and wastewater effluent organic matter (EfOM) matrices, where more sorption was observed in the ultra-pure water for PAC doses greater than 10 mg/L suggesting the presence of EfOM hinders the sorption of the pharmaceuticals to the PAC. Adsorption behaviors were described by the Freundlich isotherm model. Quantitative structure property relationships (QSPRs) in the form of polyparameter linear solvation energy relationships were developed for simulating the Freundlich adsorption capacity in both ultra-pure and EfOM matrices. The significant 3D-based descriptors for the QSPRs were the molar volume, polarizability and hydrogen-bond donor parameters.

Fluorescence lifetime evaluation of whole soils from the Amazon rainforest.

PubMed

Nicolodelli, Gustavo; Tadini, Amanda Maria; Nogueira, Marcelo Saito; Pratavieira, Sebastião; Mounier, Stephane; Huaman, Jose Luis Clabel; Dos Santos, Cléber Hilário; Montes, Célia Regina; Milori, Débora Marcondes Bastos Pereira

2017-08-20

Time-resolved fluorescence spectroscopy (TRFS) is a new tool that can be used to investigate processes of interaction between metal ions and organic matter (OM) in soils, providing a specific analysis of the structure and dynamics of macromolecules. To the best of our knowledge, there are no studies in the literature reporting the use of this technique applied to whole/non-fractionated soil samples, making it a potential method for use in future studies. This work describes the use of TRFS to evaluate the fluorescence lifetimes of OM of whole soils from the Amazon region. Analysis was made of pellets of soils from an oxisol-spodosol system, collected in São Gabriel da Cachoeira (Amazonas, Brazil). The fluorescence lifetimes in the oxisol-spodosol system were attributed to two different fluorophores. One was related to complexation of an OM fraction with metals, resulting in a shorter fluorophore lifetime. A short fluorescence lifetime (2-12 ns) could be associated with simpler structures of the OM, while a long lifetime (19-66 ns) was associated with more complex OM structures. This new TRFS technique for analysis of the fluorescence lifetime in whole soil samples complies with the principles of green chemistry.

Seasonal changes in particulate and dissolved organic matter composition and quality in the Lena River Delta

NASA Astrophysics Data System (ADS)

Mollenhauer, G.; Winterfeld, M.; Hefter, J.; Bodenstab, L.; Morgenstern, A.; Eulenburg, A.; Heim, B.; Koch, B.; Schefuss, E.; Moerth, C. M.; Rethemeyer, J.

2016-12-01

Arctic rivers are known to export large quantities of carbon by discharge of dissolved and particulate organic carbon (DOC, POC), and in a warming and progressively moister Arctic, these exports may increase resulting in a reduction of arctic continental carbon stocks. These rivers have highly variable discharge rates with a pronounced maximum during the spring freshet associated with highest concentrations of DOC and POC. Most studies investigating the isotopic composition and quality of carbon exported by Arctic rivers rely on samples taken in summer during base flow, which is due to the logistical challenges associated with sampling in the remote Arctic permafrost regions. Here we present a record of δ13C and Δ14C of DOC and POC collected between late May during the freshet and late August 2014 in the Lena River Delta. POC Δ14C shows an initial trend towards older values in the spring samples, which is reversed in summer, associated with a shift towards more depleted δ13C values. We interpret this aging trend as reflecting progressive thawing throughout the ice-free season, resulting in mobilization of progressively older carbon from deeper thawed layers. The summer reversal indicates admixture of aquatic organic matter. DOC Δ14C, in contrast, remains at relatively modern levels with rather constant δ13C values throughout the sampling period. We furthermore analysed the biomarker composition of Lena Delta particulate OM collected in spring and summer. From spring to summer, we observe trends in abundance of individual leaf-wax derived biomarkers indicating higher abundance of algal biomass in the summer particles. Trends in soil microbial biomarkers and compound-specific δD of leaf-wax lipids suggest a shift in sources towards higher contributions from the southern catchment in summer. DOC composition investigated with FT-ICR-MS changes from spring with higher abundances of compounds with high H/C and low O/C ratios to late summer, when fewer compounds were found. Our results illustrate the seasonal variability in composition and sources of organic matter discharged by the Lena River. Paired with the strong seassonality of the hydrograph, this implies that total annual discharge of organic matter contains a disproportionally high contribution from the northern part of the catchment.

Physicochemical Characterization of Potential Mobile Organic Matter In Five Typical German Agricultural Soils

NASA Astrophysics Data System (ADS)

Séquaris, J.-M.; Lewandowski, H.; Vereecken, H.

Organic matter (OM) in soils plays an important role, i.e., in maintaining soil structure or as source of nutrients. OM is mainly adsorbed at the surface of clay minerals and oxides and remains mostly immobile. However, mobile OM in dissolved form (DOM) or associated with water dispersible colloids (WDC) in soil water may influence trans- port of pollutants. The goal of this study is to compare 5 typical German agricultural soils in terms of distribution and quality of OM in the top soil (0-15 cm). The present report focuses on the physicochemical characterization of potential mobile OM so- lutions obtained after physical fractionation of soil materials based on sedimentation after a prolonged shaking in water or electrolyte solutions. Three soil fractions dif- fering in particle size were separated in function of sedimentation time: a colloidal fraction: < 2 ţm; a microaggregate fraction: 2-20 ţm and a sediment fraction: > 20 ţm. The soil electrolyte phase containing the DOM fraction was obtained by a high-speed centrifugation of the colloidal phase. After a water or low electrolyte concentration (« 1 mM Ca2+) extraction, it can be shown that the mobile fraction of OM or OC (organic carbon) is distributed between the colloidal and the electrolyte phases in a concentration ratio range of 10-40 to 1. A less mobile OC fraction is associated with the microaggregate fraction while immobile OC remains adsorbed in the sediment fraction. An increasing OC and total-N content with diminishing particle-size of soil (colloidal and microaggregate fractions) has been confirmed. A higher OC input due to special soil management is sensitively detected in fractions with a greater particle size (sediment fraction). Increasing the Ca2+ concentration up to 10 mM during the water extraction diminishes the DOC concentration by an average factor of 3 while the OC associated with the dispersed colloids (OCWDC) vanished almost completely. Thus, a critical coagulation concentration of about 1-2 mM Ca2+ can be estimated which increases the stability of soil aggregates in water. Different titration, electrokinetic and spectroscopic methods were applied to characterize the colloidal and electrolyte phases. These techniques provide information on the physicochemical heterogeneity of mobile OM from various agricultural soils.

Effect of biochar application and soil temperature on characteristics of organic matter associated with aggregate-size and density fractions

NASA Astrophysics Data System (ADS)

Kaiser, Michael; Grunwald, Dennis; Marhan, Sven; Poll, Christian; Bamminger, Chris; Ludwig, Bernard

2016-04-01

Potential increases in soil temperature due to climate change might result in intensified soil organic matter (SOM) decomposition and thus higher CO2 emissions. Management options to increase and stabilize SOM include the application of biochar. However, the effects of biochar amendments under elevated soil temperatures on SOM dynamics are largely unknown. The objective of this study was to analyze the effect of biochar application and elevated soil temperature on the amount and composition of OM associated with fractions of different turnover kinetics. Samples were taken from four treatments of the Hohenheim Climate Change Experiment with the factors temperature (ambient or elevated by 2.5 °C in 4 cm depth, six years before sampling) and biochar (control and 30 t / ha Miscanthus pyrolysis biochar, one year before sampling) in two depths (0 - 5 and 5 - 15 cm). Basal respiration and microbial biomass C were analyzed within an incubation experiment. Aggregate size-fractions were separated by wet-sieving and the free light, occluded light (oLF), and heavy fractions were isolated by density fractionation. All fractions were analyzed for organic C and δ13C as well as by infrared spectroscopy. Preliminary data suggest that biochar significantly increased basal respiration and that the microbial biomass C was significantly affected by elevated temperature. No biochar-C was found in the microbial biomass. Biochar and elevated temperature had only minor effects on the organic C associated with aggregate-size classes, although biochar was incorporated into all fractions already after one year of application. Biochar application significantly increased the organic C associated with oLF. In most samples affected by biochar, the proportion of C=O groups was significantly increased. The results suggest that already after one year, biochar-mineral interactions were formed leading to an aggregate occlusion of applied biochar. At least in the short-term, the effect of biochar on the amount and composition of OM associated with different aggregate-size and density fractions seem to be independent from soil temperature.

Organic matter-solid phase interactions are critical for predicting arsenic release and plant uptake in Bangladesh paddy soils.

PubMed

Williams, Paul N; Zhang, Hao; Davison, William; Meharg, Andrew A; Hossain, Mahmud; Norton, Gareth J; Brammer, Hugh; Islam, M Rafiqul

2011-07-15

Agroecological zones within Bangladesh with low levels of arsenic in groundwater and soils produce rice that is high in arsenic with respect to other producing regions of the globe. Little is known about arsenic cycling in these soils and the labile fractions relevant for plant uptake when flooded. Soil porewater dynamics of field soils (n = 39) were recreated under standardized laboratory conditions to investigate the mobility and interplay of arsenic, Fe, Si, C, and other elements, in relation to rice grain element composition, using the dynamic sampling technique diffusive gradients in thin films (DGT). Based on a simple model using only labile DGT measured arsenic and dissolved organic carbon (DOC), concentrations of arsenic in Aman (Monsoon season) rice grain were predicted reliably. DOC was the strongest determinant of arsenic solid-solution phase partitioning, while arsenic release to the soil porewater was shown to be decoupled from that of Fe. This study demonstrates the dual importance of organic matter (OM), in terms of enhancing arsenic release from soils, while reducing bioavailability by sequestering arsenic in solution.

Petrographic and biomarker analysis of xylite-rich coal from the Kolubara and Kostolac lignite basins (Pannonian Basin, Serbia)

NASA Astrophysics Data System (ADS)

Đoković, Nataša; Mitrović, Danica; Životić, Dragana; Bechtel, Achim; Sachsenhofer, Reinhard F.; Stojanović, Ksenija

2018-02-01

The maceral and biomarker characteristics of 4 sublithotypes of xylite-rich coal (SXCs), pale yellow, dark yellow, brown and black, originating from the Kolubara and Kostolac lignite basins were determined. Based on these results, differences in sources and changes of organic matter (OM) resulting in formation of 4 SXCs were established. Conifers (particularly Cupressaceae, Taxodiaceae and Pinacea) had a significant impact on the precursor OM of all SXCs. The contribution of gymnosperm vs. angiosperm vegetation decreased in order pale yellow SXC>dark yellow SXC>brown SXC>black SXC. The distribution of non-hopanoid triterpenoids indicates that change of SXC colour from yellow to black is associated with reduced input of angiosperm plants from the Betulacea family. Differences in hopane distribution, bitumen content, proportion of short-chain n-alkanes and degree of aromatization of di- and triterpenoids of pale yellow SXC are controlled by microbial communities which took part in the diagenetic alteration of OM. The content of total huminites increased from black to pale yellow SXC, whereas contents of total liptinite and inertinite macerals showed the opposite trend. SXCs differ according to textinite/ulminite ratio, which sharply decreased from pale yellow to black SXC, reflecting increase in gelification of woody tissue. Regarding the composition of liptinite macerals, the SXCs mostly differ according to resinite/liptodetrinite and resinite/suberinite ratios, which are higher in yellow than in brown and black SXC. This result along with values of TOC/N ratio and Carbon Preference Index indicate that the contribution of well preserved woody material, including lignin tissue vs. the impact of epicuticular waxes decreased from yellow to black SXC.

PM2.5 chemical composition at a rural background site in Central Europe, including correlation and air mass back trajectory analysis

NASA Astrophysics Data System (ADS)

Schwarz, Jaroslav; Cusack, Michael; Karban, Jindřich; Chalupníčková, Eva; Havránek, Vladimír; Smolík, Jiří; Ždímal, Vladimír

2016-07-01

PM2.5 mass concentrations and chemical compositions sampled over a 13-month period at a Central European rural background site (Košetice) are presented in this work. A comprehensive chemical analysis of PM2.5 was performed, which provided elemental composition (Al, Si, S, Cl, K, Ca, Ti, V, Cr, Mn, Fe, Ni, Cu, Zn, As, Se, Br, Rb, Sr, Y, Zr, and Pb) and the concentration of water-soluble inorganic anions (SO42 -, NO3-. Cl-, NO2-, Br-, and H2PO4-) and cations (Na+, NH4+, K+, Ca2 +, and Mg2 +), elemental and organic carbon (EC and OC), and levoglucosan. Spearman correlation coefficients between individual chemical species and particle number concentrations were calculated for the following six size ranges: 10-25 nm (N10-25), 25-50 nm (N25-50), 50-80 nm (N50-80), 80-150 nm (N80-150), 150-300 nm (N150-300), and 300-800 nm (N300-800). Average concentrations of individual species were comparable with concentrations reported from similar sites across Central Europe. Organic matter (OM) accounted for 45% of the PM2.5 mass (calculated from OC by a factor of 1.6), while the second most common component were secondary aerosols (SO42 -: 19%, NO3-: 14%, NH4+: 10%), which accounted for 43% of the mass. Based on levoglucosan analysis, 31% of OM was attributed to emissions associated with biomass burning (OMBB). EC concentrations, determined using the EUSAAR_2 thermal optical protocol, contributed 4% to PM2.5 mass. A total of 1% of the mass was attributed to a mineral matter source, while the remaining 6% was from an undetermined mass. Seasonal variations showed highest concentrations of NO3- and OMBB in winter, nitrate share in spring, and an increase in percentage of SO42 - and mineral matter in summer. The largest seasonal variation was found for species associated with wood and coal combustion (levoglucosan, K+, Zn, Pb, As), which had clear maxima during winter. Correlation analysis of different size fraction particle number concentrations was used to distinguish the influence of fresh, local aerosol and aged, long-range transport aerosol. The influences of different air masses were also investigated. The lowest concentrations of PM2.5 were recorded under the influence of marine air masses from the NW, which were also marked by increased concentrations of marine aerosol. In contrast, the highest concentrations of PM2.5 and most major chemical components were measured during periods when continental easterly air masses were dominant.

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, an orbital maneuvering system (OMS) pod is moved into place on Atlantis. It is one of two OMS pods attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

NASA Image and Video Library

2003-10-30

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, an orbital maneuvering system (OMS) pod is moved into place on Atlantis. It is one of two OMS pods attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, an orbital maneuvering system (OMS) pod is suspended in air as it is moved toward Atlantis for installation. Two OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

NASA Image and Video Library

2003-10-30

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, an orbital maneuvering system (OMS) pod is suspended in air as it is moved toward Atlantis for installation. Two OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, an orbital maneuvering system (OMS) pod is moved closer to Atlantis for installation. Two OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

NASA Image and Video Library

2003-10-30

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, an orbital maneuvering system (OMS) pod is moved closer to Atlantis for installation. Two OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, technicians make adjustments to the orbital maneuvering system (OMS) pod being installed on Atlantis. The OMS pod is one of two that are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

NASA Image and Video Library

2003-10-30

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, technicians make adjustments to the orbital maneuvering system (OMS) pod being installed on Atlantis. The OMS pod is one of two that are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, one of two orbital maneuvering system (OMS) pods is being moved for installation on Atlantis. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

NASA Image and Video Library

2003-10-30

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, one of two orbital maneuvering system (OMS) pods is being moved for installation on Atlantis. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, technicians move an orbital maneuvering system (OMS) pod into the correct position on Atlantis. The OMS pod is one of two that are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

NASA Image and Video Library

2003-10-30

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, technicians move an orbital maneuvering system (OMS) pod into the correct position on Atlantis. The OMS pod is one of two that are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

Effects of vegetation control and organic matter removal on soil water content in a young Douglas-fir plantation.

Treesearch

Warren D. Devine; Constance A. Harrington

2006-01-01

We evaluated the effects of vegetation control and organic matter (OM) removal on soil water content (SWC) in a Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) plantation from age 3 through age 5. Treatments were presence versus absence of vegetation control through year 5 and bole only harvest of the previous stand versus total-tree harvest of...

Is organic matter found in glaciers similar to soil organic matter? A detailed molecular-level investigation of organic matter found in cryoconite holes on the Athabasca Glacier

NASA Astrophysics Data System (ADS)

Simpson, M. J.; Xu, Y.; Eyles, N.; Simpson, A. J.; Baer, A.

2009-04-01

Cryoconite is a dark-coloured, dust-like material found on the surfaces of glaciers. Cryoconite has received much interest recently because cryoconite holes, which are produced by accelerated ice melt, act as habitats for microbes on glacier surfaces and accelerate ice melt. To the best of our knowledge, cyroconite organic matter (COM) has not yet been chemically characterized at the molecular level. In this study, organic matter biomarkers and a host of Nuclear Magnetic Resonance (NMR) techniques were used to characterize COM from the Athabasca Glacier in the Canadian Rocky Mountains. The research questions that were targeted by this study include: 1) what are the sources of COM on the Athabasca Glacier; 2) are there any biomarker and/or NMR evidence for microbial community activity in the cryoconite holes; and 3) is the COM structurally similar to terrestrial OM? Solvent extracts contained large quantities of fatty acids, n-alkanols, n-alkanes, wax esters and sterols. A large contribution of C23, C25 and C27 relative to C29 and C31 n-alkanes suggests that allochthonous COM is mainly from lower order plants (mosses, lichens). This is confirmed by the absence of lignin phenols (after copper (II) oxidation) in extracts and NMR analyses of COM. Solution-state 1H NMR reveals prominent signals from microbial components, while solid-state 13C Cross Polarization Magic Angle Spinning NMR analysis shows an atypically high alkyl/O-alkyl ratio, suggesting that COM is unique compared to organic matter found in nearby soils. The NMR results suggest that COM is dominated by microbial-derived compounds which were confirmed by phospholipid fatty acid analysis, which showed a significant microbial contribution, primarily from bacteria and minor microeukaryotes. Both biomarker and NMR data suggest that COM likely supports active microbial communities on the Athabasca Glacier and that COM composition is uniquely different than that found in terrestrial environments. Our data indicate that windblown or meltwater fluvial OM rich materials from adjacent peatlands or mosses and lichens developed on tundra soils can be trapped and preserved in cryoconite holes in glaciers and may be an important mechanism for promoting active bacterial colonies in glacial environments both modern and ancient. Given that such material is incorporated within the glacier in the accumulation zone or flushed by meltwaters into subglacial environments, reworked COM may provide nutrient sources for active microbial communities found within and under glaciers.

Mineral surface-reactive metabolites secreted during fungal decomposition contribute to the formation of soil organic matter.

PubMed

Wang, Tao; Tian, Zhaomo; Bengtson, Per; Tunlid, Anders; Persson, Per

2017-12-01

Soil organic matter (SOM) constitutes the largest terrestrial C pool. An emerging, untested, view is that oxidation and depolymerization of SOM by microorganisms promote the formation of SOM-mineral associations that is critical for SOM stabilization. To test this hypothesis, we performed laboratory-scale experiments involving one ectomycorrhizal and one saprotrophic fungus that represent the two major functional groups of microbial decomposers in the boreal forest soils. Fungal decomposition enhanced the retention of SOM on goethite, partly because of oxidative modifications of organic matter (OM) by the fungi. Moreover, both fungi secreted substantial amounts (> 10% new biomass C) of aromatic metabolites that also contributed to an enhanced mineral retention of OM. Our study demonstrates that soil fungi can form mineral-stabilized SOM not only by oxidative conversion of the SOM but also by synthesizing mineral surface-reactive metabolites. Metabolites produced by fungal decomposers can play a yet overlooked role in the formation and stabilization of SOM. © 2017 Society for Applied Microbiology and John Wiley & Sons Ltd.

A multiisotope C and N modeling analysis of soil organic matter turnover and transport as a function of soil depth in a California annual grassland soil chronosequence

USGS Publications Warehouse

Baisden, W.T.; Amundson, Ronald; Brenner, D.L.; Cook, A.C.; Kendall, C.; Harden, J.W.

2002-01-01

We examine soil organic matter (SOM) turnover and transport using C and N isotopes in soil profiles sampled circa 1949, 1978, and 1998 (a period spanning pulse thermonuclear 14C enrichment of the atmosphere) along a 3-million-year annual grassland soil chronosequence. Temporal differences in soil ??14C profiles indicate that inputs of recently living organic matter (OM) occur primarily in the upper 20-30 cm but suggest that OM inputs can occur below the primary rooting zone. A three-pool SOM model with downward transport captures most observed variation in ??14C, percentages of C and N, ??13C, and ??15N, supporting the commonly accepted concept of three distinct SOM pools. The model suggests that the importance of the decadal SOM pool in N dynamics is greatest in young and old soils. Altered hydrology and possibly low pH and/or P dynamics in highly developed old soils cause changes in soil C and N turnover and transport of importance for soil biogeochemistry models.

Terrestrial spore-pollen record across the Cenomanian-Turonian hothouse episode

NASA Astrophysics Data System (ADS)

Heimhofer, Ulrich; Wucherpfennig, Nina; Adatte, Thierry; Schouten, Stefan; Kujau, Ariane

2017-04-01

The Cenomanian-Turonian boundary interval (CTBE) witnessed major perturbations in global biogeochemical cycling, oceanography and climate expressed in the widespread deposition of organic-rich marine shales (OAE2) and a positive carbon isotope excursion (CIE). Whereas the response of marine biota has received considerable attention during the last decades, information on the dynamics of continental ecosystems during the CTBE is still lacking. Given the outstanding warm sea-surface temperatures (SSTs) reconstructed from proxy data for the CTBE, the composition of terrestrial biomes is expected to have responded to the inferred changes in climate. However, global sea-level high-stand and the widespread deposition of organic-rich shales composed almost exclusively of marine organic matter (OM) have hampered attempts to extract terrestrial palynological information from strata covering the CTBE. Here we present palynological and organic-geochemical data from a stratigraphically well-constrained marine succession from the Southern Provence Basin (SPB) located in the western Tethys domain. Carbon isotope data from both carbonate fine-fraction as well as bulk OM show a positive CIE, although of smaller amplitude compared to existing records. TEX86 data indicate very warm SSTs of up to 33°C, which is in line with previous mid-latitude temperature records. The stratigraphic distribution of particulate OM shows high amounts and a stable flux of well-preserved continental OM to the basin, supported by RockEval pyrolysis data and BIT-index. The spore-pollen assemblage is dominated by non-saccate gymnosperm pollen (Inaperturopollenites, Araucariacites, Classopollis) and by angiosperm pollen of the Normapolles group (mainly representatives of Atlantopollis and Complexiopollis). Pteridophyte spores are diverse, but quantitatively less important. With stratigraphic height, the assemblage shows a distinct change due to an up-section increase in Inaperturopollenites and paralleled by a decline in certain species of Atlantopollis (most pronounced in Atlantopollis microreticulatus). These changes occur in concert with the onset of the positive CIE (in organic carbon) and predate the Cenomanian-Turonian boundary. The integrated palynological and geochemical dataset from the SPB documents the composition of mid-latitude floral assemblages during a phase of exceptional global warmth. Despite the outstanding temperatures, a diverse and rich flora occupying various habitats in the hinterland of the SPB is observed. The prominent shift in the spore-pollen stratigraphic distribution may reflect increasing temperatures during OAE2 resulting in an impoverished hothouse flora. However, effects of sea-level fluctuations and changing oceanographic patterns may also play a role in the observed stratigraphic patterns.

Black Nitrogen as a source for the built-up of microbial biomass in soils

NASA Astrophysics Data System (ADS)

López-Martín, María; Milter, Anja; Knicker, Heike

2016-04-01

In areas with frequent wildfires, soil organic nitrogen (SON) is sequestered in pyrogenic organic matter (PyOM) due to heat-induced transformation of proteinaceous compounds into N-heterocycles, i.e. pyrrole, imidazole and indole compounds. These newly formed structures, known as Black Nitrogen (BN), have been assumed to be hardly degradable by microorganisms, thus being efficiently sequestered from the N cycle. On the other hand, a previous study showed that nitrogen of BN can be used by plants for the built-up of their biomass (de la Rosa and Knicker 2011). Thus, BN may play an important role as an N source during the recovery of the forest after a fire event. In order to obtain a more profound understanding of the role of BN within the N cycle in soils, we studied the bioavailability and incorporation of N derived from PyOM into microbial amino acids. For that, pots with soil from a burnt and an unburnt Cambisol located under a Mediterranean forest were covered with different amendments. The toppings were mixtures of unlabeled KNO3 with 15N labeled grass or 15N-labeled PyOM from burned grass and K15NO3 mixed with unlabeled grass material or PyOM. The pots were kept in the greenhouse under controlled conditions for 16 months and were sampled after 0.5, 1, 5, 8 and 16 months. From all samples the amino acids were extracted after hydrolysis (6 M HCl, 22 h, 110 °C) and quantified via gas chromatography mass spectrometry (GC/MS). The fate of 15N was followed by isotopic ratio mass spectrometry (IRMS). The results show that the contribution of extractable amino acids to total soil organic matter was always higher in the unburnt than in the burnt soil. However, with ongoing incubation their amount decreased. Already after 0.5 months, some PyOM-derived 15N was incorporated into the extractable amino acids and the amount increased with experiment time. Since this can only occur after prior microbial degradation of PyOM our results clearly support a lower biochemical recalcitrance of N-rich charred residues than formerly assumed. Our experiment demonstrated further that aside from being incorporated into plants (de la Rosa and Knicker 2011) the release PyOM-N can also be used for the built-up of new microbial biomass. ACKNOWLEDGEMENT The Ministerio de Economía y competitividad de España, the European Regional Development Fund (ERDF) and the IHSS Training Award are acknowledged for financial support of the project (CGL2009-10557) and the travel and stay of the María López Martín at the Helmholtz Center for Environmental Research UFZ. The latter is thanked greatly for hosting the awardee. REFERENCES de la Rosa, J. M. and H. Knicker (2011). "Bioavailability of N released from N-rich pyrogenic organic matter: An incubation study." Soil Biology and Biochemistry 43(12): 2368-2373.

Is cosmic acceleration slowing down?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shafieloo, Arman; Sahni, Varun; Starobinsky, Alexei A.

2009-11-15

We investigate the course of cosmic expansion in its recent past using the Constitution SN Ia sample, along with baryon acoustic oscillations (BAO) and cosmic microwave background (CMB) data. Allowing the equation of state of dark energy (DE) to vary, we find that a coasting model of the universe (q{sub 0}=0) fits the data about as well as Lambda cold dark matter. This effect, which is most clearly seen using the recently introduced Om diagnostic, corresponds to an increase of Om and q at redshifts z < or approx. 0.3. This suggests that cosmic acceleration may have already peaked andmore » that we are currently witnessing its slowing down. The case for evolving DE strengthens if a subsample of the Constitution set consisting of SNLS+ESSENCE+CfA SN Ia data is analyzed in combination with BAO+CMB data. The effect we observe could correspond to DE decaying into dark matter (or something else)« less

Removal of organic matter and electricity generation of sediments from Progreso, Yucatan, Mexico, in a sediment microbial fuel cell.

PubMed

González-Gamboa, Nancy Karina; Valdés-Lozano, David Sergio; Barahona-Pérez, Luis Felipe; Alzate-Gaviria, Liliana; Domínguez-Maldonado, Jorge Arturo

2017-02-01

Sediment microbial fuel cells (SMFCs) are devices that generate electrical energy through sediments rich in organic matter (OM). The present study assessed the potential of sediments collected at two sites in Yucatan, Mexico, (the swamp of Progreso port and Yucalpetén dock) to be used in these electrochemical devices. Sediments were collected during the rainy and winter seasons and were monitored in the SMFC for 120 days through electrochemical and physicochemical characterization. OM removal in the SMFC ranged from 8.1-18.01%, generating a maximum current density of 232.46 mA/cm 2 and power density of 95.85 mW/cm 2 . SUVA analysis indicated that with a young soil, the ratio E4/E6 presented evidence directly related to the degradation of aromatic and aliphatic compound formation, implying humification and, therefore, sediment enrichment.

Effects of fire on organic matter content and aggregate stability of soils in South of Spain.

NASA Astrophysics Data System (ADS)

Martínez-Murillo, Juan F.; Ruiz-Sinoga, José D.; Jiménez-Donaire, Virginia; Hueso-González, Paloma; Gabarrón-Galeote, Miguel A.

2014-05-01

Wildfires affect dramatically to soil physical, chemical and biological properties, which changes the hydrological and erosive soil response. The objectives of this study are to compare some soil properties affected by fire in field conditions. The experimental area is located in the South of Spain, 32 km western of the city of Málaga. In general, the area is characterized by a sub-humid Mediterranean climate (mean annual precipitation: 699 mm year-1; mean annual temperature: 17°C), with a substratum of alkaline metamorphic rocks. Vegetation cover consists on a mixed open wood of Quercus spp. and Pinus spp. with typical degraded Mediterranean scrub, where the dominant genus are Ulex spp. and Cistus spp. This area was partially affected by a wildfire on September 11th 2011. Soil samples were taken in burned and unburned areas: soil covered by shrubs, trees and bare soils. Unburned area was adjacent to the burned one and both of them had the same general conditions. On each microenvironment samples of the first 5 cm of soil were collected on September 19th 2011. The analyzed properties in the laboratory were organic matter (OM) and aggregate stability (AS). In general, fire affected mainly to OM (p<0.01). When we performed the analyses dividing the samples according to vegetal cover, the ANOVA showed that the wildfire only affected the OM content in soil covered by shrubs. In soil covered by trees and bare soil OM decreased, but it was insignificant. AS were not affected in any sampled environment.

Using Novel Laboratory Incubations and Field Experiments to Identify the Source and Fate of Reactive Organic Carbon in an Arsenic-contaminated Aquifer System

NASA Astrophysics Data System (ADS)

Stahl, M.; Tarek, M. H.; Badruzzaman, B.; Harvey, C. F.

2017-12-01

Characterizing the sources and fate of organic matter (OM) within aquifer systems is key to our understanding of both the broader global carbon cycle as well as the quality of our groundwater resources. The linkage between the subsurface carbon cycle and groundwater quality is perhaps nowhere more apparent than in the aquifer systems of South and Southeast Asia, where the contamination of groundwater with geogenic arsenic (As) is widespread and threatens the health of millions of individuals. OM fuels the biogeochemical processes driving As mobilization within these aquifers, however the source (i.e., modern surface-derived or aged sedimentary OM) of the reactive OM is widely debated. To characterize the sources of OM driving aquifer redox processes we tracked DIC and DOC concentrations and isotopes (stable and radiocarbon) along groundwater flow-paths and beneath an instrumented study pond at a field site in Bangladesh. We also conducted a set of novel groundwater incubation experiments, where we carbon-dated the DOC at the start and end of a experiment in order to determine the age of the OM that was mineralized. Our carbon/isotope balance reveals that aquifer recharge introduces a large quantity of young (i.e. near modern) OM that is efficiently mineralized within the upper few meters of the aquifer, effectively limiting this pool of reactive surface-sourced OM from being transported deeper into the aquifer where significant As mobilization takes place. The OM mineralized past the upper few meters is an aged, sedimentary source. Consistent with our field data, our incubation experiments show that past the upper few meters of the aquifer the reactive DOC is significantly older than the bulk DOC and has an age consistent with sedimentary OM. Combining our novel set of incubation experiments and a carbon/isotope balance along groundwater flow-paths and beneath our study pond we have identified the sources of reactive OM across different aquifer depths in a Bangladeshi aquifer. Our insight into the subsurface carbon cycle reveals that sediment-sourced OM is driving the biogeochemical processes responsible for high groundwater As concentrations and that exogenous sources of OM introduced by anthropogenic activities are unlikely to have had a significant effect on the concentrations of As presently observed at our site.

Removal of polycyclic synthetic musks and antineoplastic drugs in ozonated wastewater: Quantitation based on the data of differential spectroscopy.

PubMed

Li, Wei; Nanaboina, Venkateswarlu; Chen, Fang; Korshin, Gregory V

2016-03-05

This study examined the degradation behavior of polycyclic musks (PMs) and antineoplastic drugs (ADs) and the absorbance spectra of effluent organic matter (EfOM) in municipal wastewater by ozone. Specific ozone doses used in the experiments ranged from 0 to 1mg O3/mg dissolved organic matter (DOC). The examined PMs included galaxolide, tonalide, celestolide, traseolide and phantolide. ADs included busulfan, chlorambucil, cyclophosphamide, dacarbazine, flutamide, ifosfamide, tamoxifen and methotrexate. Strong monotonic albeit nonlinear correlations were found to exist between relative changes of EfOM absorbance at 254 nm (i.e. ΔA254/A(0)254) and the degradation of the selected PMs and ADs. This result was interpreted based on the concept of the simultaneous oxidation of EfOM and, on the other hand, PMs and ADs. This interpretation showed that PMs were degraded primarily via OH radical attack, with tonalide and phantolide being less reactive compared with the other PMs. ADs such as cyclophosphamide, ifosfamide and busulfan were also determined to undergo oxidation by OH radicals. Comparison of the behavior of the radical probe para-chlorobenzoic acid and the examined ADs and PMs allowed evaluating corresponding reaction rate constants for reactions between these species and OH radicals. Copyright © 2015 Elsevier B.V. All rights reserved.

Meta-analysis of the relationship between dietary tannin level and methane formation in ruminants from in vivo and in vitro experiments.

PubMed

Jayanegara, A; Leiber, F; Kreuzer, M

2012-06-01

A meta-analysis was conducted to evaluate the extent to which dietary tannin level is related to methane emissions from ruminants. Data from a total of 30 experiments comprising 171 treatments were entered in a database. In vitro batch culture and in vivo measurements were distinguished as experimental approaches. With any approach, methane declined when dietary tannins increased. The in vitro approach predicted the in vivo response quite accurately. However, in vitro, the response followed a quadratic response pattern (R(2) = 0.66; lower response with increasing tannin level), whereas in vivo, this decline was linear (R(2) = 0.29). This indicates that the in vitro batch culture is of limited accuracy for estimating effects at levels >100 g tannin/kg dry matter. The large variation in methane/digestible organic matter (OM) found at low tannin levels may explain contrasting literature reports. Methane reduction with tannins was associated with a reduced apparent digestion of OM, and especially fibre, but methane/apparently digestible OM declined also. The present findings are helpful as they identified an underlying general antimethanogenic effect of tannins across tannin sources and experimental conditions, thus allowing concentrating the search on sources with satisfactory palatability and low adverse effects on animal performance. © 2011 Blackwell Verlag GmbH.

Spectroscopic characterization of organic matter of a soil and vinasse mixture during aerobic or anaerobic incubation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Doelsch, Emmanuel; Masion, Armand; Cazevieille, Patrick

2009-06-15

Mineralization potentials are often used to classify organic wastes. These methods involve measuring CO{sub 2} production during batch experiments, so variations in chemical compounds are not addressed. Moreover, the physicochemical conditions are not monitored during the reactions. The present study was designed to address these deficiencies. Incubations of a mixture of soil and waste (vinasse at 20% dry matter from a fermentation industry) were conducted in aerobic and anaerobic conditions, and liquid samples obtained by centrifugation were collected at 2 h, 1 d and 28 d. Dissolved organic carbon (DOC) patterns highlighted that: there was a 'soil effect' which increasedmore » organic matter (OM) degradation in all conditions compared to vinasse incubated alone; and OM degradation was faster under aerobic conditions since 500 mg kg{sup -1} of C remained after aerobic incubation, as compared to 4000 mg kg{sup -1} at the end of the anaerobic incubation period. No changes were detected by Fourier transform infrared spectroscopy (FTIR) between 2 h and 1 d incubation. At 28 days incubation, the FTIR signal of the aerobic samples was deeply modified, thus confirming the high OM degradation. Under anaerobic conditions, the main polysaccharide contributions ({nu}(C-O)) disappeared at 1000 and 1200 cm{sup -1}, as also confirmed by the {sup 13}C NMR findings. Under aerobic incubation, a 50% decrease in the polysaccharide proportion was observed. Under anaerobic conditions, significant chemical modifications of the organic fraction were detected, namely formation of low molecular weight organic acids.« less

Determining the upper limit on the black hole mass from NGC 4748 X-ray photometry

NASA Astrophysics Data System (ADS)

Fedorova, E.

2017-12-01

In this paper, we analyze all the available X-ray photometrical data of the narrow-line Seyfert 1 galaxy NGC 4748, namely XMM-Newton (EPIC and OM), INTEGRAL (ISGRI and JEM-X) as well as SWIFT (BAT and XRT) to estimate, if it's possible, the mass of the central black hole from the variability of the lightcurves. In the XMM/EPIC composite lightcurve, we found fast quasiperiodic variations of the 0.5-10.0 keV flux on a timescales of 103 seconds. These variations were interpreted as the result of the emission of a dense hot clump of matter orbiting the central black hole near the innermost stable trajectory. The structure function analysis of this lightcurve allowed us to put an upper limit to the mass of the central BH, as 6.23 * 107Ms.

Structures of benthic prokaryotic communities and their hydrolytic enzyme activities resuspended from samples of intertidal mudflats: An experimental approach

NASA Astrophysics Data System (ADS)

Mallet, Clarisse; Agogué, Hélène; Bonnemoy, Frédérique; Guizien, Katell; Orvain, Francis; Dupuy, Christine

2014-09-01

Resuspended sediment can increase plankton biomass and the growth of bacteria, thus influencing the coastal planktonic microbial food web. But little is known about resuspension itself: is it a single massive change or a whole series of events and how does it affect the quantity and quality of resuspended prokaryotic cells? We simulated the sequential erosion of mud cores to better understand the fate and role of benthic prokaryotes resuspended in the water column. We analyzed the total, attached and free-living prokaryotic cells resuspended, their structure and the activities of their hydrolytic enzymes in terms of the biotic and abiotic factors that affect the composition of microphytobenthic biofilm. Free living prokaryotes were resuspended during the fluff layer erosion phase (for shear velocities below 5 cm · s- 1) regardless of the bed sediment composition. At the higher shear velocities, resuspended prokaryotes were attached to particulate matter. Free and attached cells are thus unevenly distributed, scattered throughout the organic matter (OM) in the uppermost mm of the sediment. Only 10-27% of the total cells initially resuspended were living and most of the Bacteria were Cyanobacteria and Gamma-proteobacteria; their numbers increased to over 30% in parallel with the hydrolytic enzyme activity at highest shear velocity. These conditions released prokaryotic cells having different functions that lie deep in the sediment; the most important of them are Archaea. Finally, composition of resuspended bacterial populations varied with resuspension intensity, and intense resuspension events boosted the microbial dynamics and enzyme activities in the bottom layers of sea water.

Insights into particle cycling in the Sargasso Sea from lipid biomarkers in suspended particles: Seasonality and physical forcing

NASA Astrophysics Data System (ADS)

Pedrosa Pàmies, R.; Conte, M. H.; Weber, J.

2017-12-01

Lipid biomarkers elucidate organic material (OM) sources and cycling within the water column. Biomarker composition and bulk properties (organic carbon (OC), nitrogen (N), OC/N ratio, CaCO3 and stable isotopes) were determined in suspended particles (30-4400 m, 100 mab) collected at Oceanic Flux Program site offshore Bermuda in April/November 2015 and October 2016, three periods of contrasting oceanographic conditions. Key lipid biomarkers were used to evaluate the relative importance of phytoplankton-, bacterial- and zooplankton-OM sources, diagenetic reprocessing, and the impact of upper ocean environmental forcing on the carbon pump. Additionally, we assessed benthic remineralization by comparing particles above and within the nepheloid layer (4400 m). N-fatty acids, n-alcohols and sterols comprise up to 85%, 12% and 7%, respectively, of total extractable lipids. Higher lipid concentrations in April vs November 2015 mirror seasonality in primary production, while change in sterol composition reflect shifts in phytoplankton community structure. In the mesopelagic zone, increased cholesterol/phytosterol ratios and percentages of C16 and C18 n-alcohols, odd-chain and branched n-fatty acids document a transition from algal to animal OM sources as well as bacterial reprocessing of labile OM. The impact of Hurricane Nicole (October 2016) on the mixed layer and subsequent increases in production/flux was evident in higher concentrations as well as greater depth penetration of particulate N and fresh/labile algal biomarkers (e.g. 18:5 ω3 and 22:6 ω3 polyunsaturated fatty acids) in the upper 1000 m. Suspended particles in the nepheloid layer had higher concentrations of OC and N and were more depleted in d13C than particles at 4200 m for all dates. While nepheloid lipid composition was similar for all dates, lipid concentrations in April 2015 (seasonal production peak) and October 2016 (hurricane physical forcing) were higher than in November 2015, consistent with the increases observed in the mesopelagic layer. Our results demonstrate that episodic physical forcing of the upper ocean, such as observed during Hurricane Nicole, can trigger an episodic export of labile materials and have a large effect on the OM composition throughout the water column.

Mass loss and nutrient concentrations of buried wood as a function of organic matter removal, soil compaction, and vegetation control in a regenerating oak-pine forest

Treesearch

Felix Ponder; John M. Kabrick; Mary Beth Adams; Deborah S. Page-Dumroese; Marty F. Jurgensen

2017-01-01

Mass loss and nutrient concentrations of northern red oak (Quercus rubra) and white oak (Q. alba) wood stakes were measured 30 months after their burial in the upper 10 cm of soil in a regenerating forest after harvesting and soil disturbance. Disturbance treatments were two levels of organic matter (OM) removal (only...

Changes in soil physical and chemical properties following organic matter removal and compaction: 20-year response of the aspen Lake-States Long Term Soil Productivity installations

Treesearch

Robert A. Slesak; Brian J. Palik; Anthony W. D' Amato; Valerie J. Kurth

2017-01-01

Soil functions that control plant resource availability can be altered by management activities such as increased organic matter (OM) removal and soil compaction during forest harvesting. The Long Term Soil Productivity study was established to evaluate how these practices influence soil and site productivity using experimental treatments that span a range of forest...

Utilization of forest slash to sequester carbon in loblolly pine plantations in the lower coastal plain

Treesearch

F. Sanchez; E.A. Carter; W. Edwards

2002-01-01

Soil-organic matter (SOM) is a complex array of components including soil fauna and flora at different stages of decomposition (Berg et al., 1982). Its concentration in soils can vary from 0.5% in mineral soils to almost 100% in peat soils (Brady, 1974). Organic matter (OM) in the surface mineral soil is considered a major determinant of forest ecosystem productivity...

The evolution of organic matter along the lower Amazon River continuum - Óbidos to the ocean

NASA Astrophysics Data System (ADS)

Ward, N. D.; Keil, R. G.; Medeiros, P. M.; Brito, D.; Cunha, A.; Sawakuchi, H. O.; Moura, J. S.; Yager, P. L.; Krusche, A. V.; Richey, J. E.

2013-12-01

The influence of the Amazon River on global hydrologic and biogeochemical cycling is well recognized. The Amazon River provides roughly 16% of the global freshwater supply to the ocean and is a significant source of CO2 to the atmosphere, outgassing 0.5 Pg C y-1 to the atmosphere--a flux roughly equivalent to the amount of carbon 'sequestered' by the Amazon rainforest (Field et al, 1998; Richey et al., 2002; Malhi et al., 2008). However, much of our understanding of the flux of matter from the Amazon River into the Atlantic Ocean (and atmosphere) is limited to measurements made at and upstream of Óbidos, 900 km upstream from the actual river mouth. Further, there are few to no observations documenting the transformation of organic matter in a parcel of water as it travels downstream of Óbidos into the ocean. Here we explore the hydrological and biogeochemical evolution of the lower Amazon River continuum, from Óbidos to the Atlantic Ocean. A suite of dissolved and particulate organic matter (OM) parameters were measured during a series of five river expeditions with stations at Óbidos, the Tapajós tributary, the mouth of the Lago Grande de Curuai floodplain lake, both the north and south channels of the Amazon River mouth near Macapá, and the confluence of the Amazon and Tocantins Rivers near Belém. In addition to bulk carbon isotopic signatures, a suite of biomarkers including dissolved and particulate lignin-derived phenols were measured to trace the sources and degradation history of terrestrial vascular plant derived OM throughout the continuum. Dissolved and particulate lignin phenol concentrations both correlated positively with river discharge in the Amazon River mainstem, with variable export patterns from the tributaries and floodplains. As organic matter travels along the continuum it is degraded by microbial composition, fuelling gross respiration and CO2 outgassing. The flux of organic carbon to the ocean is chemically recalcitrant as a result of the constant biological processing of labile OM throughout the lower river. We estimate that 40% of the vascular plant-derived organic carbon sequestered by the terrestrial biosphere is degraded within soils, 55% is degraded along the river continuum, and less than 5% is delivered to the ocean (Ward et al., 2013) References Cited Field, C., M. Behrenfeld, J. Randerson, and P. Falkowski. 1998. Primary production of the biosphere: Integrating terrestrial and oceanic components. Science 281, 237-240. Malhi, Y., Roberts, J.T., Betts, R.A., Killeen, T.J., Li, W., Nobre, C.A. 2008. Climate change, deforestation, and the fate of the Amazon. Science 319, 169-172. Richey, J. E., Melack, J. M., Aufdenkampe, A. K., Ballester, V. M. & Hess, L. L. 2002. Outgassing from Amazonian rivers and wetlands as a large tropical source of atmospheric CO2. Nature 416, 617-620. Ward, N.D.; Keil, R.G.; Medeiros, P.M.; Brito, D.C.; Cunha, A.C.; Dittmar, T.; Yager, P.L.; Krusche, A.V.; Richey, J.E. 2013. Degradation of terrestrially derived macromolecules in the Amazon River. Nature Geoscience. doi: 10.1038/ngeo1817

Trial by Fire: On the terminology and methods used in pyrogenic organic carbon research

NASA Astrophysics Data System (ADS)

Zimmerman, Andrew R.; Mitra, Siddhartha

2017-11-01

Our understanding of the cycling of fire-derived, i.e. pyrogenic organic matter (pyOM), as well as the goals of the community of researchers who study it, may be inhibited by the many terms and methods currently used in its quantification and characterization. Terms currently used for pyOM have evolved by convention, but are often poorly defined. Further, each of the different methods now used to quantify solid and dissolved pyrogenic carbon (pyC) comes with its own biases and artifacts. That is, each detects only a fraction of the total pyrogenic products produced by fire, while, at the same time, include some fraction of non-pyrogenic OM. This may be evident in the commonly observed correlations between pyC and total organic C reported for both soils and dissolved OM in many different systems. We suggest that our research area can be placed on a stronger footing by: 1) agreement upon a common set of terms tied to the method used for detection (e.g. of the form pyCmethod), 2) implementation of another ‘ring trial’ study with a wider set of natural soil and water samples that cross-compare more recently developed methods, and 3) further investigation of the processes which preserve/degrade/transport pyOM in the environment.

Andic soils : mineralogical effect onto organic matter dynamics, organic matter effect onto mineral dynamics, or both?

NASA Astrophysics Data System (ADS)

Basile-Doelsch, Isabelle; Amundson, Ronald; Balesdent, Jérome; Borschneck, Daniel; Bottero, Jean-Yves; Colin, Fabrice; de Junet, Alexis; Doelsch, Emmanuel; Legros, Samuel; Levard, Clément; Masion, Armand; Meunier, Jean-Dominique; Rose, Jérôme

2014-05-01

From a strictly mineralogical point of view, weathering of volcanic glass produces secondary phases that are short range ordered alumino-silicates (SRO-AlSi). These are imogolite tubes (2 to 3 nm of diameter) and allophane supposedly spheres (3.5 to 5 nm). Their local structure is composed of a curved gibbsite Al layer and Si tetrahedra in the vacancies (Q0). Proto-imogolites have the same local structure but are roof-shape nanoparticles likely representing the precursors of imogolite and allophanes (Levard et al. 2010). These structures and sizes give to the SRO-AlSi large specific surfaces and high reactivities. In some natural sites, imogolites and allophanes are formed in large quantities. Aging of these phases may lead to the formation of more stable minerals (halloysite, kaolinite and gibbsite) (Torn et al 1997). In natural environments, when the weathering of volcanic glass is associated with the establishment of vegetation, the soils formed are generally andosols. These soils are particularly rich in organic matter (OM), which is explained by the high ability of SRO-AlSi mineral phases to form bonds with organic compounds. In a first order "bulk" approach, it is considered that these bonds strongly stabilize the organic compounds as their mean age can reach more than 10 kyrs in some studied sites (Basile-Doelsch et al. 2005; Torn et al. 1997). However, the structure of the mineral phases present in andosols deserves more attention. Traditionally, the presence in the SRO-AlSi andosols was shown by selective dissolution approaches by oxalate and pyrophosphate. Using spectroscopic methods, mineralogical analysis of SRO-AlSi in andosols samples showed that these mineral phases were neither imogolites nor allophanes as originally supposed, but only less organized structures remained in a state of proto-imogolites (Basile-Doelsch al. 2005 ; Levard et al., 2012). The presence of OM would have an inhibitory effect on the formation of secondary mineral phases, by blocking the crystal growth of SRO-AlSi. Conversely, the effect of minerals on the dynamics of organic compounds also deserves to be studied in greater detail. If the "bulk" approaches showed that proto-imogolites involve long-term stabilized OM, other approaches such as densimetric fractionation and C3/C4 chronosequences (Basile-Doelsch et al. 2007; De Junet et al. 2013) led us to consider a new model involving two types of organo-mineral interactions: (1) OM stabilized by strong bonds to proto-imogolite, leading to a slow OM turnover and (2) OM retained within the porosity of the 3D structure formed by the proto-imogolite (similar to a gel structure), leading to a faster OM turnover. Understanding the mechanisms of organo-mineral interactions in andosols will open new research directions for understanding the mechanisms of stabilization of OM in any type of soil (Bonnard et al. 2012). Basile-Doelsch et al., Geoderma, 137, 477-489, 2007. Basile-Doelsch et al., European Journal of Soil Science, 56, 689-703, 2005. Bonnard et al., European Journal of Soil Science, 63, 5, 625-636, 2012. de Junet, et al., Journal of Analytical and Applied Pyrolysis, 99, 92-10, 2013, Levard et al, Geoderma, 183-184, 100-108, 2012. Levard et al. Chemistry Of Materials, 22, 2466-2473, 2010 Torn et al. Nature, London, 389, 170-173, 1997.

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, technicians make final adjustments to the orbital maneuvering system (OMS) pod being installed on Atlantis. The OMS pod is one of two that are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

NASA Image and Video Library

2003-10-30

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, technicians make final adjustments to the orbital maneuvering system (OMS) pod being installed on Atlantis. The OMS pod is one of two that are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, one of two orbital maneuvering system (OMS) pods is lifted off its stand to move it toward Atlantis for installation. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

NASA Image and Video Library

2003-10-30

KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, one of two orbital maneuvering system (OMS) pods is lifted off its stand to move it toward Atlantis for installation. The OMS pods are attached to the upper aft fuselage left and right sides. Fabricated primarily of graphite epoxy composite and aluminum, each pod is 21.8 feet long and 11.37 feet wide at its aft end and 8.41 feet wide at its forward end, with a surface area of approximately 435 square feet. Each pod houses the Reaction Control System propulsion components used for inflight maneuvering and is attached to the aft fuselage with 11 bolts.

Nitrogen isotopes from terrestrial organic matter as a new paleoclimatic proxy for pre-quaternary time

NASA Astrophysics Data System (ADS)

Tramoy, romain; Schnyder, johann; thuy Nguyen Tu, thanh; Yans, johan; Storme, jean yves; Sebilo, mathieu; Derenne, sylvie; Jacob, jérémy; Baudin, françois

2014-05-01

Marine and lacustrine sedimentary organic matter is often dominated by algal-bacterial production. Its nitrogen isotopic composition (δ15Norg) is frequently used to reconstruct biogeochemical processes involved in the nitrogen cycle, such as N utilization by organisms (e.g. Altabet et al., 1995), denitrification and diagenesis processes (e.g. Altabet et al., 1995; Sebilo et al., 2003; Gälman et al., 2009) or to evidence N sources variability (e.g. Hodell and Schelske, 1998; Vreca and Muri, 2006) . However, all these parameters and processes make N isotopic signals in marine and lacustrine environments often very complex to interpret. After pioneer studies, Mariotti et al. (1981), Austin and Vitousek (1998), Amundson et al. (2003), Swap et al. (2004), and Liu and Wang (2008) have shown that the δ15Norg of modern or quaternary terrestrial plants seem to be positively correlated with temperature and negatively correlated with precipitations. Therefore, δ15Norg of terrestrial OM might be a better record for paleoclimatic studies than δ15Norg of sedimentary OM dominated by algal-bacterial production. Recently, promising organic nitrogen isotopic data (δ15Norg) have been published on lignites from the Dieppe-Hampshire Basin (Paleocene-Eocene transition, Normandy (Storme et al., 2012). Authors suggest that the δ15Norg recorded local paleoclimatic and paleoenvironmental conditions. Following these results, the aim of this work is to test the use of stable nitrogen isotopes in terrestrial OM as a new paleoclimatic marker for pre-quaternary geological series. Does δ15Norg constitute a valuable tool to reconstruct past climates? What are the limits in the use of this proxy and possible methodological bias related to organic sources or diagenetic processes? To address these questions, δ15Norg must be measured in samples from periods associated with large and well documented climate change. We therefore selected a Liassic continental sedimentary succession from Taskomirsay, Kazakhstan. This succession is rich in dispersed OM and wood fragments allowing accurate N isotopes measurements. Preliminary results on δ13Corg and palynology suggest that the Pliensbachian/Toarcian transition is recorded at the top of the sedimentary succession. This transition has been studied for a long time since it is characterized by one of the most important global environmental and climatic change of the Phanerozoic time ( Jenkyns, 1988; Hermoso et al., 2012). We are therefore testing the paleoclimatic "proxy" potential of δ15Norg for this time interval by comparing the δ15Norg signal with other indicators more classically used for paleoclimate studies. We have also investigated the influence of differences in organic sources and of early diagenesis on the δ15Norg variations.

Assessment of Various Organic Matter Properties by Infrared Reflectance Spectroscopy of Sediments and Filters

NASA Astrophysics Data System (ADS)

Alaoui, G.; Leger, M.; Gagne, J.; Tremblay, L.

2009-05-01

The goal of this work was to evaluate the capability of infrared reflectance spectroscopy for a fast quantification of the elemental and molecular compositions of sedimentary and particulate organic matter (OM). A partial least-squares (PLS) regression model was used for analysis and values were compared to those obtained by traditional methods (i.e., elemental, humic and HPLC analyses). PLS tools are readily accessible from software such as GRAMS (Thermo-Fisher) used in spectroscopy. This spectroscopic-chemometric approach has several advantages including its rapidity and use of whole unaltered samples. To predict properties, a set of infrared spectra from representative samples must first be fitted to form a PLS calibration model. In this study, a large set (180) of sediments and particles on GFF filters from the St. Lawrence estuarine system were used. These samples are very heterogenous (e.g., various tributaries, terrigenous vs. marine, events such as landslides and floods) and thus represent a challenging test for PLS prediction. For sediments, the infrared spectra were obtained with a diffuse reflectance, or DRIFT, accessory. Sedimentary carbon, nitrogen, humic substance contents as well as humic substance proportions in OM and N:C ratios were predicted by PLS. The relative root mean square error of prediction (%RMSEP) for these properties were between 5.7% (humin content) and 14.1% (total humic substance yield) using the cross-validation, or leave-one out, approach. The %RMSEP calculated by PLS for carbon content was lower with the PLS model (7.6%) than with an external calibration method (11.7%) (Tremblay and Gagné, 2002, Anal. Chem., 74, 2985). Moreover, the PLS approach does not require the extraction of POM needed in external calibration. Results highlighted the importance of using a PLS calibration set representative of the unknown samples (e.g., same area). For filtered particles, the infrared spectra were obtained using a novel approach based on attenuated total reflectance, or ATR, allowing the direct analysis of the filters. In addition to carbon and nitrogen contents, amino acid and muramic acid (a bacterial biomarker) yields were predicted using PLS. Calculated %RMSEP varied from 6.4% (total amino acid content) to 18.6% (muramic acid content) with cross-validation. PLS regression modeling does not require a priori knowledge of the spectral bands associated with the properties to be predicted. In turn, the spectral regions that give good PLS predictions provided valuable information on band assignment and geochemical processes. For instance, nitrogen and humin contents were greatly determined by an absorption band caused by aluminosilicate OH group. This supports the idea that OM-clay interactions, important in humin formation and OM preservation, are mediated by nitrogen-containing groups.

Modeling of the chemical composition of fine particulate matter: Development and performance assessment of EASYWRF-Chem

NASA Astrophysics Data System (ADS)

Mendez, M.; Lebègue, P.; Visez, N.; Fèvre-Nollet, V.; Crenn, V.; Riffault, V.; Petitprez, D.

2016-03-01

The European emission Adaptation SYstem for the WRF-Chem model (EASYWRF-Chem) has been developed to generate chemical information supporting the WRF-Chem requirements from any emission inventory based on the CORINAIR methodology. Using RADM2 and RACM2 mechanisms, "emission species" are converted into "model species" thanks to the SAPRC methodology for gas phase pollutant and the PM10 and PM2.5 fractions. Furthermore, by adapting US EPA PM2.5 profiles, the processing of aerosol chemical speciation profiles separates the unspeciated PM2.5 emission into five chemical families: sulfates, nitrates, elemental carbon, organic aerosol and unspeciated aerosol. The evaluation of the model has been performed by separately comparing model outcomes with (i) meteorological measurements; (ii) NO2, O3, PM10 and PM2.5 mass concentrations from the regional air quality monitoring network; (iii) hourly-resolved data from four field campaign measurements, in winter and in summer, on two sites in the French northern region. In the latter, a High Resolution - Time of Flight - Aerosol Mass Spectrometer (HR-ToF-AMS) provided non-refractory PM1 concentrations of sulfate, nitrate and ammonium ions as well as organic matter (OM), while an aethalometer provided black carbon (BC) concentrations in the PM2.5 fraction. Meteorological data (temperature, wind, relative humidity) are well simulated for all the time series data except for specific events as wind direction changes or rainfall. For particulate matter, results are presented by considering firstly the total mass concentration of PM2.5 and PM10. EASYWRF-Chem simulations overestimated the PM10 mass concentrations by + 22% and + 4% for summer and winter periods respectively, whereas for the finer PM2.5 fraction, mass concentrations were overestimated by + 20% in summer and underestimated by - 13% in winter. Simulated sulfate concentrations were underestimated and nitrate concentrations were overestimated but hourly variations were well represented. Ammonium particulate matter was well simulated for all seasons. Although simulated particulate OM concentrations in PM2.5 were underestimated, their hourly variations were well reproduced by the model. At least BC measurements revealed that EASYWRF-Chem forecast performance was higher in winter than during summer when BC concentrations were very low.

Sorptive fractionation of organic matter and formation of organo-hydroxy-aluminum complexes during litter biodegradation in the presence of gibbsite

NASA Astrophysics Data System (ADS)

Heckman, K.; Grandy, A. S.; Gao, X.; Keiluweit, M.; Wickings, K.; Carpenter, K.; Chorover, J.; Rasmussen, C.

2013-11-01

Solid and aqueous phase Al species are recognized to affect organic matter (OM) stabilization in forest soils. However, little is known about the dynamics of formation, composition and dissolution of organo-Al hydroxide complexes in microbially-active soil systems, where plant litter is subject to microbial decomposition in close proximity to mineral weathering reactions. We incubated gibbsite-quartz mineral mixtures in the presence of forest floor material inoculated with a native microbial consortium for periods of 5, 60 and 154 days. At each time step, samples were density separated into light (<1.6 g cm-3), intermediate (1.6-2.0 g cm-3), and heavy (>2.0 g cm-3) fractions. The light fraction was mainly comprised of particulate organic matter, while the intermediate and heavy density fractions contained moderate and large amounts of Al-minerals, respectively. Multi-method interrogation of the fractions indicated the intermediate and heavy fractions differed both in mineral structure and organic compound composition. X-ray diffraction analysis and SEM/EDS of the mineral component of the intermediate fractions indicated some alteration of the original gibbsite structure into less crystalline Al hydroxide and possibly proto-imogolite species, whereas alteration of the gibbsite structure was not evident in the heavy fraction. DRIFT, Py-GC/MS and STXM/NEXAFS results all showed that intermediate fractions were composed mostly of lignin-derived compounds, phenolics, and polysaccharides. Heavy fraction organics were dominated by polysaccharides, and were enriched in proteins, N-bearing compounds, and lipids. The source of organics appeared to differ between the intermediate and heavy fractions. Heavy fractions were enriched in 13C with lower C/N ratios relative to intermediate fractions, suggesting a microbial origin. The observed differential fractionation of organics among hydroxy-Al mineral types suggests that microbial activity superimposed with abiotic mineral-surface-mediated fractionation leads to strong density differentiation of organo-mineral complex composition even over the short time scales probed in these incubation experiments. The data highlight the strong interdependency of mineral transformation, microbial community activity, and organic matter stabilization during biodegradation.

Analytical pyrolysis-based study on intra-skeletal organic matrices from Mediterranean corals.

PubMed

Adamiano, Alessio; Goffredo, Stefano; Dubinsky, Zvy; Levy, Oren; Fermani, Simona; Fabbri, Daniele; Falini, Giuseppe

2014-09-01

Off-line analytical pyrolysis combined with gas chromatography–mass spectroscopy (GC–MS), directly or after trimethylsilylation, along with infrared spectroscopy and amino acid analysis was applied for the first time to the characterization of the intra-skeletal organic matrix (OM) extracted from four Mediterranean hard corals. They were diverse in growth form and trophic strategy namely Balanophyllia europaea and Leptopsammia pruvoti—solitary corals, only the first having zooxanthelle—and Cladocora caespitosa and Astroides calycularis—colonial corals, only the first with zooxanthelle. Pyrolysis products evolved from OM could be assigned to lipid (e.g. fatty acids, fatty alcohols, monoacylglicerols), protein (e.g. 2,5-diketopiperazines, DKPs) and polysaccharide (e.g. anhydrosugars) precursors. Their quantitative distribution showed for all the species a low protein content with respect to lipids and polysaccharides. A chemometric approach using principal component analysis (PCA) and clustering analysis was applied on OM mean amino acidic compositions. The small compositional diversity across coral species was tentatively related with coral growth form. The presence of N-acetyl glucosamine markers suggested a functional link with other calcified tissues containing chitin. The protein fraction was further investigated using novel DKP markers tentatively identified from analytical pyrolysis of model polar linear dipeptides. Again, no correlation was observed in relation to coral ecology. These analytical results revealed that the bulk structure and composition of OMs among studied corals are similar, as it is the textural organization of the skeleton mineralized units. Therefore, they suggest that coral’s biomineralization is governed by similar macromolecules, and probably mechanisms, independently from their ecology.

Episode-Based Evolution Pattern Analysis of Haze Pollution: Method Development and Results from Beijing, China.

PubMed

Zheng, Guangjie; Duan, Fengkui; Ma, Yongliang; Zhang, Qiang; Huang, Tao; Kimoto, Takashi; Cheng, Yafang; Su, Hang; He, Kebin

2016-05-03

Haze episodes occurred in Beijing repeatedly in 2013, resulting in 189 polluted days. These episodes differed in terms of sources, formation processes, and chemical composition and thus required different control policies. Therefore, an overview of the similarities and differences among these episodes is needed. For this purpose, we conducted one-year online observations and developed a program that can simultaneously divide haze episodes and identify their shapes. A total of 73 episodes were identified, and their shapes were linked with synoptic conditions. Pure-haze events dominated in wintertime, whereas mixed haze-dust (PM2.5/PM10 < 60%) and mixed haze-fog (Aerosol Water/PM2.5 ∼ 0.3) events dominated in spring and summer-autumn, respectively. For all types, increase of ratio of PM2.5 in PM10 was typically achieved before PM2.5 reached ∼150 μg/m(3). In all PM2.5 species observed, organic matter (OM) was always the most abundant component (18-60%), but it was rarely the driving factor: its relative contribution usually decreased as the pollution level increased. The only OM-driven episode observed was associated with intensive biomass-burning activities. In comparison, haze evolution generally coincided with increasing sulfur and nitrogen oxidation ratios (SOR and NOR), indicating the enhanced production of secondary inorganic species. Applicability of these conclusions required further tests with simultaneously multisite observations.

Association of outdoor air pollution and indoor renovation with early childhood ear infection in China.

PubMed

Deng, Qihong; Lu, Chan; Jiang, Wei; Zhao, Jinping; Deng, Linjing; Xiang, Yuguang

2017-02-01

Otitis media (OM) is a common infection in early childhood with repeated attacks that lead to long-term complications and sequelae, but its risk factors still remain unclear. To examine the risk of childhood OM for different indoor and outdoor air pollutants during different timing windows, with a purpose to identify critical windows of exposure and key components of air pollution in the development of OM. We conducted a retrospective cohort study of 1617 children aged 3-4 years in Changsha, China (2011-2012). Children's life-time prevalence of OM and exposure to indoor air pollution related to home renovation activities were surveyed by a questionnaire administered by the parents. Children's exposure to outdoor air pollution, including nitrogen dioxide (NO 2 ), sulfur dioxide (SO 2 ), and particulate matter with an aerodynamic diameter ≤ 10 μm (PM 10 ), was estimated using the measured concentrations at municipal monitoring stations. The odds ratio (OR) and 95% confidence interval (CI) of childhood OM for prenatal and postnatal exposure to indoor and outdoor air pollution were examined by using logistic regression model. Life-time prevalence of OM in preschool children (7.3%) was associated not only with prenatal exposure to industrial air pollutant with adjusted OR (95% CI) = 1.44 (1.09-1.88) for a 27 μg/m 3 increase in SO 2 but also with postnatal exposure to indoor renovations with OR (95% CI) = 1.62 (1.05-2.49) for new furniture and 1.81 (1.12-2.91) for redecoration, particularly in girls. Combined exposure to outdoor SO 2 and indoor renovation significantly increased OM risk. Furthermore, we found that exposure to outdoor SO 2 and indoor renovation were significantly associated with the onset but not repeated attacks of OM. Prenatal exposure to outdoor industrial air pollution and postnatal exposure to indoor renovation are independently associated with early childhood OM in China and may cause the OM onset. Copyright © 2016 Elsevier Ltd. All rights reserved.

Composition of biomineral organic matrices with special emphasis on turbot (Psetta maxima) otolith and endolymph.

PubMed

Borelli, G; Mayer-Gostan, N; Merle, P L; De Pontual, H; Boeuf, G; Allemand, D; Payan, P

2003-06-01

The soluble organic matrix (OM) of various biominerals (red coral skeleton, oyster shell, sea urchin test, turbot otolith, chicken eggshell) was extracted after demineralization with acetic acid. The protein content of the OM varies strongly from 0.02 to 1.6 microg/mg biomineral whereas proteoglycans present less variations (from 0.7 to 1.4 microg/mg biomineral). Electrophoresis of biominerals OM shows differences in their protein pattern although several bands are present in all matrices. OM of all biominerals shows carbonic anhydrase activity but no activity was detectable in the endolymph. OM of all biominerals also displays an anticalcifying activity. After separation of the OM extracts by chloroform-methanol, 80% of the anticalcifying activity was found in the methanol phase except in the urchin test. After OM precipitation with trichloracetic acid, 70% of the activities was found in the supernatants. Partial biochemical characterization suggests that the anticalcifying factor is a polyanionic and water-soluble molecule, which could be proteoglycans. The endolymph surrounding the otolith also displays an anticalcifying activity although its inhibitous activity was 50 times lower than that of the otolith OM. However, the anticalcifying activity of the endolymph is assumed by a proteic structure (80% activity precipitated with TCA treatment). Our results suggest that both carbonic anhydrase and anticalcifying activities are widespread and play a significant role in the regulation of biomineral formation. Results are discussed in relation to the calcification process that takes place at the fluid-mineral interface.

Influence of ultrasonic energy on dispersion of aggregates and released amounts of organic matter and polyvalent cations

NASA Astrophysics Data System (ADS)

Kaiser, M.; Kleber, M.; Berhe, A. A.

2010-12-01

Aggregates play important roles in soil carbon storage and stabilization. Identification of scale-dependent mechanisms of soil aggregate formation and stability is necessary to predict and eventually manage the flow of carbon through terrestrial ecosystems. Application of ultrasonic energy is a common tool to disperse soil aggregates. In this study, we used ultra sonic energy (100 to 2000 J cm-3) to determine the amount of polyvalent cations and organic matter involved in aggregation processes in three arable and three forest soils that varied in soil mineral composition. To determine the amount of organic matter and cations released after application of different amount of ultrasonic energy, we removed the coarse fraction (>250 µm). The remaining residue (<250 µm) was mixed with water and ultrasonically dispersed by application of 100, 200, 400, 500, 1000, 1500 and 2000 J cm-3 energy. After centrifugation the supernatant was filtered and the solid residue freeze dried before we analyzed the amounts of water-extracted organic carbon (OC), Fe, Al, Ca, Mn, and Mg in the filtrates. The extracted OM and solid residues were further characterized by Fourier Transformed Infra Red spectroscopy and Scanning Electron Microscopy. Our results show a linear increase in amount of dissolved OC with increasing amounts of ultra sonic energy up to 1500 J cm-3 indicating maximum dispersion of soil aggregates at this energy level independent from soil type or land use. In contrast to Mn, and Mg, the amounts of dissolved Ca, Fe, and Al increase with increasing ultra sonic energy up to 1500 J cm-3. At 1500 J cm-3, the absolute amounts of OC, Ca, Fe, and Al released were specific for each soil type, likely indicating differences in type of OM-mineral interactions involved in micro-scaled aggregation processes. The amounts of dissolved Fe, and Al released after an application of 1500 J cm-3 are not related to oxalate- and dithionite- extractable, or total Al content indicating less disintegration of pedogenic oxides or clay minerals due to high levels of ultrasonic energy.

Molecular-Level Transformations of Lignin During Photo-Oxidation and Biodegradation

NASA Astrophysics Data System (ADS)

Feng, X.; Hills, K.; Simpson, A. J.; Simpson, M. J.

2009-05-01

As the second most abundant component of terrestrial plant residues, lignin plays a key role in regulating plant litter decomposition, humic substance formation, and dissolved organic matter (OM) production from terrestrial sources. Biodegradation is the primary decomposition process of lignin on land. However, photo- oxidation of lignin-derived compounds has been reported in aquatic systems and is considered to play a vital role in arid and semiarid regions. With increasing ultraviolet (UV) radiation due to ozone depletion, it is important to understand the biogeochemical fate of lignin exposed to photo-oxidation in terrestrial environments. This study examines and compares the transformation of lignin in a three-month laboratory simulation of biodegradation and photo-oxidation using molecular-level techniques. Lignin-derived monomers extracted by copper oxidation were analyzed by gas chromatography/mass spectrometry (GC/MS) from the water-soluble and insoluble OM of 13C-labeled corn leaves. Biodegradation increased the solubility of lignin monomers in comparison to the control samples, and the acid-to-aldehyde (Ad/Al) ratios increased in both the water-soluble and insoluble OM, indicating a higher degree of side-chain lignin oxidation. Photo-oxidation did not produce a significant change on the solubility or Ad/Al ratios of lignin from corn leaves. However, the ratios of trans-to-cis isomers of both cinnamyl units (p-coumaric acid and ferulic acid) increased with photo-oxidation and decreased with biodegradation in the insoluble OM. We also investigated the role of photo-oxidation in lignin transformation in soils cropped with 13C-labeled corn. Interestingly, the organic carbon content increased significantly with time in the water-soluble OM from soil/corn residues under UV radiation. An increase in the concentration of lignin monomers and dimers and the Ad/Al ratios was also observed with photo-oxidation. Iso-branched fatty acids of microbial origin remained in a similar concentration in the water-soluble OM from the UV-radiated and control soils, indicating little microbial contribution to the observed increase in water-soluble carbon. These observations suggest that photo-oxidation may increase the solubility of soil organic matter (SOM) through the oxidation of lignin-derived compounds. Mechanisms of lignin oxidation (demethylation or side-chain oxidation) and molecular size distribution changes of the water-soluble and NaOH-soluble OM during photo-oxidation and biodegradation will also be examined using solution-state nuclear magnetic resonance (NMR) spectroscopy. Collectively, our experiment demonstrates that while biodegradation predominates in the decomposition of lignin in plant litter, photo- oxidation may play an important part in destabilizing lignin-derived compounds in the soil.

Molecular-level transformations of lignin during photo-oxidation and biodegradation

NASA Astrophysics Data System (ADS)

Feng, X.; Hills, K.; Simpson, A. J.; Simpson, M. J.

2009-04-01

As the second most abundant component of terrestrial plant residues, lignin plays a key role in regulating plant litter decomposition, humic substance formation, and dissolved organic matter (OM) production from terrestrial sources. Biodegradation is the primary decomposition process of lignin on land. However, photo-oxidation of lignin-derived compounds has been reported in aquatic systems and is considered to play a vital role in arid and semiarid regions. With increasing ultraviolet (UV) radiation due to ozone depletion, it is important to understand the biogeochemical fate of lignin exposed to photo-oxidation in terrestrial environments. This study examines and compares the transformation of lignin in a three-month laboratory simulation of biodegradation and photo-oxidation using molecular-level techniques. Lignin-derived monomers extracted by copper oxidation were analyzed by gas chromatography/mass spectrometry (GC/MS) from the water-soluble and insoluble OM of 13C-labeled corn leaves. Biodegradation increased the solubility of lignin monomers in comparison to the control samples, and the acid-to-aldehyde (Ad/Al) ratios increased in both the water-soluble and insoluble OM, indicating a higher degree of side-chain lignin oxidation. Photo-oxidation did not produce a significant change on the solubility or Ad/Al ratios of lignin from corn leaves. However, the ratios of trans-to-cis isomers of both cinnamyl units (p-coumaric acid and ferulic acid) increased with photo-oxidation and decreased with biodegradation in the insoluble OM. We also investigated the role of photo-oxidation in lignin transformation in soils cropped with 13C-labeled corn. Interestingly, the organic carbon content increased significantly with time in the water-soluble OM from soil/corn residues under UV radiation. An increase in the concentration of lignin monomers and dimers and the Ad/Al ratios was also observed with photo-oxidation. Iso-branched fatty acids of microbial origin remained in a similar concentration in the water-soluble OM from the UV-radiated and control soils, indicating little microbial contribution to the observed increase in water-soluble carbon. These observations suggest that photo-oxidation may increase the solubility of soil organic matter (SOM) through the oxidation of lignin-derived compounds. Mechanisms of lignin oxidation (demethylation or side-chain oxidation) and molecular size distribution changes of the water-soluble and NaOH-soluble OM during photo-oxidation and biodegradation will also be examined using solution-state nuclear magnetic resonance (NMR) spectroscopy. Collectively, our experiment demonstrates that while biodegradation predominates in the decomposition of lignin in plant litter, photo-oxidation may play an important part in destabilizing lignin-derived compounds in the soil.

Strategies for oxychlorine removal to facilitate pyrolytic organic matter analysis in subsurface oxychlorine-rich brines on Earth and Mars

NASA Astrophysics Data System (ADS)

Chou, L.; Kenig, F. P. H.; Jackson, W. A.

2017-12-01

The ubiquity of oxychlorine salts in the Martian soil significantly hampers our ability to unambiguously detect and characterize organic matter (OM) that is of Martian origin via pyrolysis. The Sample Analysis at Mars (SAM) instrument suite onboard the Curiosity Rover detected chlorinated and non-chlorinated inorganic and organic compounds (HCl, CO2, C1-C4 chloroalkanes, chlorobenzenes) at Gale Crater. The C1 to C3 chloroalkanes have been attributed to the reaction between the oxychlorines and OM deriving from the SAM instrument suite. Chlorobenzenes and dichloroalkanes, on the other hand, were observed at elevated levels at Gale Crater and are hypothesized to be the first indigenous OM detected on Mars. However, due to complex chlorination and oxidation reactions in the SAM pyrolysis oven, the precursor molecules to these chlorohydrocarbons are unknown. In order to facilitate the detection of OM in ClO4-rich samples on Mars, we explore various strategies, such as using strong base anion (SBA) exchange resins, to remove ClO4- from a Mars analog sample. This sample was obtained from a subsurface brine beneath the frozen Lake Vida (East Antarctica). Lake Vida brine (LVBr) contains abundant DOC at 48.2 mmol·L-1 and ClO4- at 49 µg•L-1. Resin-treated samples were analyzed via solid phase microextraction (SPME) gas chromatography-mass spectrometry (GC-MS). The SBA resin successfully removed ClO4- to below detection level from standard brine solution (3M NaCl + 50 µg•L-1 ClO4-) and LVBr using a minimum of 3.4 mL of resin volume per 100 mL of sample volume. Although the abundance of CO2, CH2Cl2 and HCl formed via the oxidation and chlorination of OM during SPME GC-MS analysis of resin-treated LVBr was significantly reduced, it was not completely eliminated. This suggests that the degradation of other oxychlorines (i.e. ClO3-) may also be obstructing our ability to detect OM indigenous to LVBr. The average level of ClO3- in LVBr after resin treatment was 16.7 ppb. We attempt to remove ClO3- using a nitrate-specific resin, as ClO3-specific resins are not currently manufactured, in an effort to further reduce the levels of ClO3- from the brine sample, allowing for the downstream pyrolytic analysis of OM present in LVBr, as well as oxychlorine-rich samples on Mars.

The role of soil communities in improving ecosystem services in organic farming

NASA Astrophysics Data System (ADS)

Zandbergen, Jelmer; Koorneef, Guusje; Veen, Cees; Schrama, Jan; van der Putten, Wim

2017-04-01

Worldwide soil fertility decreases and it is generally believed that organic matter (OM) addition to agricultural soils can improve soil properties leading to beneficial ecosystem services. However, it remains unknown under which conditions and how fast biotic, physical and chemical soil properties respond to varying quality and quantity of OM inputs. Therefore, the aims of this research project are (1) to unravel biotic, physical and chemical responses of soils to varying quantity and quality of OM addition; and (2) to understand how we can accelerate the response of soils in order to improve beneficial soil ecosystem services faster. The first step in our research project is to determine how small-scale spatio-temporal patterns in soil biotic, physical and chemical properties relate to crop production and quality. To do this we combine field measurements on soil properties with remote and proximate sensing measures on crop development and yield in a long-term farming systems experiment in the Netherlands (Vredepeel). We hypothesize that spatio-temporal variation in crop development and yield are strongly related to spatio-temporal variation in soil parameters. In the second step of our project we will use this information to identify biological interactions underlying improving soil functions in response to OM addition over time. We will specifically focus on the role of soil communities in driving nutrient cycling, disease suppression and the formation of soil structure, all crucial elements of key soil services in agricultural soils. The knowledge that will be generated in our project can be used to detect specific organic matter qualities that support the underlying ecological processes to accelerate the transition towards improved soil functioning thereby governing enhanced crop yields.

Effect of Trichoderma on horticultural seedlings' growth promotion depending on inoculum and substrate type.

PubMed

Marín-Guirao, J I; Rodríguez-Romera, P; Lupión-Rodríguez, B; Camacho-Ferre, F; Tello-Marquina, J C

2016-10-01

The biostimulant effect of Trichoderma spp. on horticultural crops are highly variable. Thus, practical use of Trichoderma sp. requires feasible formulated products and suitable substrates. This study evaluates the survival and the growth-promotion effect of a Trichoderma saturnisporum rice formulation compared with a nonformulated conidia suspension (seven treatments in total), on tomato, pepper and cucumber seedlings grown in two substrates: (i) rich in organic matter (OM) and (ii) mineral substrate without OM. The results showed beneficial effects on seedling growth in the OM-rich substrate when T. saturnisporum rice formulation (mainly at maximum concentration) was applied, but the effects were opposite when the mineral substrate without OM was used. The effects were closely linked to the level of inoculum in the substrate, which was greater upon application of the formulated inoculum as opposed to the nonformulated one. The use of rice to prepare the inoculum of T. saturnisporum seems to be promising for seedling growth in the nursery when it is applied in a substrate that is rich in organic matter, but it must be considered that under certain conditions of food shortage, Trichoderma sp. could show pathogenicity to seedlings. This study provides evidence of the complexity inherent in the use of micro-organisms in agriculture, while also confirming that the activity of the biofertilizers based on Trichoderma depends on the type of inoculum and its concentration, as well as the properties of the medium in which the fungi develop. Further studies assessing the effectiveness or possible pathogenicity of Trichoderma in different soils under greenhouse conditions must be addressed. © 2016 The Society for Applied Microbiology.

Intake and digestion of wethers fed with dwarf elephant grass hay with or without the inclusion of peanut hay.

PubMed

Schnaider, Maria Alice; Ribeiro-Filho, Henrique Mendonça Nunes; Vilmar Kozloski, Gilberto; Reiter, Tatiana; Dall Orsoletta, Aline Cristina; Dallabrida, Ademar Luiz

2014-08-01

The aim of this study was to evaluate the effect of the inclusion of peanut (Arachis pintoi cv. Amarillo) hay in diets based on dwarf elephant grass (DEG, Pennisetum purpureum Schum cv. Kurumi) hay of different regrowth ages on forage intake and digestibility in wether lambs. The experimental treatments consisted of DEG hay with an interval of regrowth of 30 or 45 days offered as the only feed or in mixture with peanut hay (300 g/kg of total dry matter (DM)), which were tested in eight Texel × Suffolk crossbred wethers in a replicated 4 × 4 Latin square experiment. Both organic matter (OM) and digestible OM intakes were higher (P < 0.05) in animals receiving the legume forage. Total apparent OM digestibility was higher (P < 0.05) at an increased grass regrowth age. Ruminal OM digestibility increased (P < 0.05) with legume inclusion and at a higher grass regrowth age. The nitrogen (N) intake was higher (P < 0.05) in legume treatments and lower (P < 0.05) as the grass regrowth age increased, but retention of N was not affected by treatments. Duodenal flow of both, non-ammonia N and microbial N, were not affected by legume inclusion and were lower (P < 0.05) as grass regrowth age increased. The efficiency of rumen microbial protein synthesis (ERMPS) was negatively affected (P < 0.05) by legume inclusion and was lower (P < 0.05) as the grass regrowth age increased. Supplementation of dwarf elephant grass hay cut at the vegetative stage with peanut legume hay improves nutritional supply to wethers due to an increase in the forage intake.

Complex Indigenous Organic Matter Embedded in Apollo 17 Volcanic Black Glass Surface Deposits

NASA Technical Reports Server (NTRS)

Thomas-Keprta, Kathie L.; Clemett, S. J.; Ross, D. K.; Le, L.; Rahman, Z.; Gonzalez, C.; McKay, D. S.; Gibson, E. K.

2013-01-01

Papers presented at the first Lunar Science Conference [1] and those published in the subsequent Science Moon Issue [2] reported the C content of Apollo II soils, breccias, and igneous rocks as rang-ing from approx.50 to 250 parts per million (ppm). Later Fegley & Swindle [3] summarized the C content of bulk soils from all the Apollo missions as ranging from 2.5 (Apollo 15) to 280 ppm (Apollo 16) with an overall average of 124+/- 45 ppm. These values are unexpectedly low given that multiple processes should have contributed (and in some cases continue to contribute) to the lunar C inventory. These include exogenous accretion of cometary and asteroidal dust, solar wind implantation, and synthesis of C-bearing species during early lunar volcanism. We estimate the contribution of C from exogenous sources alone is approx.500 ppm, which is approx.4x greater than the reported average. While the assessm ent of indigenous organic matter (OM) in returned lunar samples was one of the primary scientific goals of the Apollo program, extensive analysis of Apollo samples yielded no evidence of any significant indigenous organic species. Furthermore, with such low concentrations of OM reported, the importance of discriminating indigenous OM from terrestrial contamination (e.g., lunar module exhaust, sample processing and handling) became a formidable task. After more than 40 years, with the exception of CH4 [5-7], the presence of indigenous lunar organics still remains a subject of considerable debate. We report for the first time the identification of arguably indigenous OM present within surface deposits of black glass grains collected on the rim of Shorty crater during the Apollo 17 mission by astronauts Eugene Cernan and Harrison Schmitt.

Comparison of settling particles and sediments at IMAGES coring site in the northwestern North Pacific — Effect of resuspended particles on paleorecords

NASA Astrophysics Data System (ADS)

Kawahata, Hodaka; Minoshima, Kayo; Ishizaki, Yui; Yamaoka, Kyoko; Gupta, Lallan P.; Nagao, Masayuki; Kuroyanagi, Azumi

2009-12-01

In order to understand settling process of particles in high sedimentation area, one mooring of sediment trap was deployed right above the IMAGES coring site in the northwestern North Pacific. In spite of two large maxima of settling particle fluxes in June-July 2002 and October-early January 2003, organic matter (OM) and carbonate showed higher peaks in June-July while lithogenics showed a large peak in October-early January with degraded OM (low aspartic acid/beta-alanine (Asp/Bala) and glutamic acid/gamma-aminobutyric (Glu/Gaba) ratios). Fresh OM production peaked in June-July 2002 and April-May 2003. Thus a large export production occurred in spring-early summer (April-June). Alkenone production was enhanced mainly in June-July. The mean alkenone SST of the settling particles was rather consistent with the observed annual mean SST and alkenone SST determined from the surface sediments. On the other hand, the maximum lithogenic flux along with the degradation of OM indicated that a significant amount of resuspended matter contaminated the bottom sediments. Based upon idealized model, the current and settling speeds make fractionation by size and density of resuspended particles during the settling process. Accumulation rates of lithogenics were ~ 5 times those in the sediment traps, which indicate large contribution of resuspended particles to settling particles especially during October-early January, when the Tsugaru current showed high current speed. These observations call our attention to carefully reconstruct paleo-environments based upon lithogenics and several other proxies such as biogenic silica, which would be biased for example in the record of IMAGES core at Site Shimokita located on the gentle continental slope.

Clay fractions from a soil chronosequence after glacier retreat reveal the initial evolution of organo-mineral associations

NASA Astrophysics Data System (ADS)

Dümig, Alexander; Häusler, Werner; Steffens, Markus; Kögel-Knabner, Ingrid

2012-05-01

Interactions between organic and mineral constituents prolong the residence time of organic matter in soils. However, the structural organization and mechanisms of organic coverage on mineral surfaces as well as their development with time are still unclear. We used clay fractions from a soil chronosequence (15, 75 and 120 years) in the foreland of the retreating Damma glacier (Switzerland) and from mature soils outside the proglacial area (>700 and <3000 years) to elucidate the evolution of organo-mineral associations during initial soil formation. The chemical composition of the clay-bound organic matter (OM) was assessed by solid-state 13C NMR spectroscopy while the quantities of amino acids and neutral sugar monomers were determined after acid hydrolysis. The mineral phase was characterized by X-ray diffraction, oxalate extraction, specific surface area by N2 adsorption (BET approach), and cation exchange capacity at pH 7 (CECpH7). The last two methods were applied before and after H2O2 treatment. We found pronounced shifts in quantity and quality of OM during aging of the clay fractions, especially within the first one hundred years of soil formation. The strongly increasing organic carbon (OC) loading of clay-sized particles resulted in decreasing specific surface areas (SSA) of the mineral phases and increasing CECpH7. Thus, OC accumulation was faster than the supply of mineral surfaces and cation exchange capacity was mainly determined by the OC content. Clay-bound OC of the 15-year-old soils showed high proportions of carboxyl C and aromatic C. This may point to remnants of ancient OC which were inherited from the recently exposed glacial till. With increasing age (75 and 120 years), the relative proportions of carboxyl and aromatic C decreased. This was associated with increasing O-alkyl C proportions, whereas accumulation of alkyl C was mainly detected in clay fractions from the mature soils. These findings from solid-state 13C NMR spectroscopy are in line with the increasing amounts of microbial-derived carbohydrates with soil age. The large accumulation of proteins, which was comparable to those of carbohydrates, and the very low C/N ratios of H2O2-resistant OM indicated strong and preferential associations between proteinaceous compounds and mineral surfaces. In the acid soils, poorly crystalline Fe oxides were the main providers of mineral surface area and important for the stabilization of OM during aging of the clay fractions. This was indicated by (I) the strong correlations between oxalate soluble Fe and both, SSA of H2O2-treated clay fractions and OC content, and (II) the low formation of expandable clays due to small extents of mineral weathering. Our chronosequence approach provided new insights into the evolution of organo-mineral interactions in acid soils. The formation of organo-mineral associations started with the sorption of proteinaceous compounds and microbial-derived carbohydrates on mineral surfaces which were mainly provided by ferrihydrite. The sequential accumulation of different organic compounds and the large OC loadings point to multiple accretion of OM in distinct zones or layers during the initial evolution of clay fractions.

MANGROVE-EXPORTED NUTRIENT INCORPORATION BY SESSILE CORAL REEF INVERTEBRATES

EPA Science Inventory

Coastal mangrove forests were historically considered as a source of organic matter (OM) for adjacent marine systems due to high net primary production; yet recent research suggesting little uptake through the food web because of low nutritional quality, challenges the concept of...

Remobilization of polycyclic aromatic hydrocarbons and organic matter in seawater during sediment resuspension experiments from a polluted coastal environment: Insights from Toulon Bay (France).

PubMed

Guigue, Catherine; Tedetti, Marc; Dang, Duc Huy; Mullot, Jean-Ulrich; Garnier, Cédric; Goutx, Madeleine

2017-10-01

Polycyclic aromatic hydrocarbons (PAHs) and organic matter contents were measured in seawater during resuspension experiments using sediments collected from Toulon Bay (Northwestern Mediterranean Sea, France). The studied sediments were very highly contaminated in PAHs, especially in 4-ring compounds emitted from combustion processes. The sediments used for resuspension experiments were collected at 0-2 cm (diagenetically new organic matter, OM) and 30-32 cm depths (diagenetically transformed OM). They were both mostly composed of fine particles (<63 μm), enriched in organic carbon (8.2 and 6.3%, respectively) and in PAHs (concentration of Σ34 PAHs: 38.2 and 35.7 × 10 3  ng g -1 , respectively). The resuspension of these sediments led to an increase in concentrations of dissolved Σ34 PAHs, dissolved organic carbon (DOC) and dissolved humic- and tryptophan-like fluorophores in seawater up to 10-, 1.3-, 4.4- and 5.7-fold, respectively. The remobilization in seawater was higher for 4-6 ring PAHs, especially benzo(g,h,i)perylene, whose concentration exceeded the threshold values of the European Water Framework Directive. This noted the potential harmful effects of sediment resuspension on marine biota. From these sediment resuspension experiments, we determined OC-normalized partition coefficients of PAHs between sediment and water (K oc ) and found that during such events, the transfer of PAHs from sediment particles to seawater was lower than that predicted from octanol-water partition coefficients (K ow ) (i.e., measured K oc  > K oc predicted from K ow ). The results confirmed the sequestration role of sedimentary OC quality and grain size on PAHs; the OM diagenetic state seemed to impact the partition process but in a relatively minor way. Furthermore, differences were observed between 2-4 ring and 5-6 ring PAHs, with the latter displaying a relatively higher mobility towards seawater. These differences may be explained by the distribution of these two PAH pools within different OM moieties, such as humic substances and black carbon. Copyright © 2017 Elsevier Ltd. All rights reserved.

Bacteria and fluorescent organic matter: processing and production.

NASA Astrophysics Data System (ADS)

Fox, B. G.; Thorn, R. M. S.; Reynolds, D. M.

2017-12-01

There is a need for a greater understanding of the importance of aquatic organic matter (OM) within global biogeochemical cycling. This need has prompted characterisation of OM using fluorescence spectroscopy. The origin, transformation and fate of fluorescent organic matter (FOM) is not fully understood within freshwater systems. This work demonstrates the importance of microbial processing in the creation and transformation of FOM, highlighting the dynamics of microbial-FOM interactions, using a model system. The FOM signature of different bacterial species common to surface freshwaters were analysed using a non-fluorescent media; Escherichia coli, Bacillus subtilis and Pseudomonas aeruginosa. By undertaking bacterial growth curves, alongside fluorescence spectroscopy, we have been able to determine FOM development in relation to population growth. Within this, we have identified that FOM peaks are associated with different species and driven by bacterial processes, such as cell multiplication or as metabolic by-products. The intracellular and extracellular fluorescence signature of each species has also been analysed to better understand how the microbial community structure may impact the FOM signal in aquatic systems. For example, Peak T develops within the growth curves of all the cultured species and has been identified as both intracellular and extracellular FOM. Whilst Peak T has been termed `microbially-derived' previously, other fluorescence peaks associated with terrestrial high molecular weight compounds, e.g. Peak C, have also been shown to be produced by bacteria throughout growth stages. Additionally, the notion that cell lysis is responsible for the presence of larger FOM compounds was also explored. Our work highlights the capacity of bacteria to not only utilise and process OM but to actively be a source of both labile and recalcitrant OM in situ. The bacteria fluorescence signatures seen are complex with comparable fluorescence peaks to those seen in real-world freshwaters. Interestingly, this includes a range of FOM currently considered high molecular weight compounds attributed to terrestrial origin. The role of bacterial processing in aquatic systems may prove to have a wider impact on DOM transformation along the hydrological continuum and global biogeochemical cycling.

Predicting ambient aerosol Thermal Optical Reflectance (TOR) measurements from infrared spectra: organic carbon

NASA Astrophysics Data System (ADS)

Dillner, A. M.; Takahama, S.

2014-11-01

Organic carbon (OC) can constitute 50% or more of the mass of atmospheric particulate matter. Typically, the organic carbon concentration is measured using thermal methods such as Thermal-Optical Reflectance (TOR) from quartz fiber filters. Here, methods are presented whereby Fourier Transform Infrared (FT-IR) absorbance spectra from polytetrafluoroethylene (PTFE or Teflon) filters are used to accurately predict TOR OC. Transmittance FT-IR analysis is rapid, inexpensive, and non-destructive to the PTFE filters. To develop and test the method, FT-IR absorbance spectra are obtained from 794 samples from seven Interagency Monitoring of PROtected Visual Environment (IMPROVE) sites sampled during 2011. Partial least squares regression is used to calibrate sample FT-IR absorbance spectra to artifact-corrected TOR OC. The FTIR spectra are divided into calibration and test sets by sampling site and date which leads to precise and accurate OC predictions by FT-IR as indicated by high coefficient of determination (R2; 0.96), low bias (0.02 μg m-3, all μg m-3 values based on the nominal IMPROVE sample volume of 32.8 m-3), low error (0.08 μg m-3) and low normalized error (11%). These performance metrics can be achieved with various degrees of spectral pretreatment (e.g., including or excluding substrate contributions to the absorbances) and are comparable in precision and accuracy to collocated TOR measurements. FT-IR spectra are also divided into calibration and test sets by OC mass and by OM / OC which reflects the organic composition of the particulate matter and is obtained from organic functional group composition; this division also leads to precise and accurate OC predictions. Low OC concentrations have higher bias and normalized error due to TOR analytical errors and artifact correction errors, not due to the range of OC mass of the samples in the calibration set. However, samples with low OC mass can be used to predict samples with high OC mass indicating that the calibration is linear. Using samples in the calibration set that have a different OM / OC or ammonium / OC distributions than the test set leads to only a modest increase in bias and normalized error in the predicted samples. We conclude that FT-IR analysis with partial least squares regression is a robust method for accurately predicting TOR OC in IMPROVE network samples; providing complementary information to the organic functional group composition and organic aerosol mass estimated previously from the same set of sample spectra (Ruthenburg et al., 2014).

Lignin decomposition and microbial community in paddy soils: effects of alternating redox conditions

NASA Astrophysics Data System (ADS)

Cerli, Chiara; Liu, Qin; Hanke, Alexander; Kaiser, Klaus; Kalbitz, Karsten

2013-04-01

Paddy soils are characterised by interchanging cycles of anaerobic and aerobic conditions. Such fluctuations cause continuous changes in soil solution chemistry as well as in the composition and physiological responses of the microbial community. Temporary deficiency in oxygen creates conditions favourable to facultative or obligates anaerobic bacteria, while aerobic communities can thrive in the period of water absence. These alterations can strongly affect soil processes, in particular organic matter (OM) accumulation and mineralization. In submerged soils, lignin generally constitutes a major portion of the total OM because of hampered degradation under anoxic conditions. The alternating redox cycles resulting from paddy soil management might promote both degradation and preservation of lignin, affecting the overall composition and reactivity of total and dissolved OM. We sampled soils subjected to cycles of anoxic (rice growing period) and oxic (harvest and growth of other crops) conditions since 700 and 2000 years. We incubated suspended Ap material, sampled from the two paddy plus two corresponding non-paddy control soils under oxic and anoxic condition, for 3 months, interrupted by a short period of three weeks (from day 21 to day 43) with reversed redox conditions. At each sampling time (day 2, 21, 42, 63, 84), we determined lignin-derived phenols (by CuO oxidation) as well as phospholipids fatty acids contents and composition. We aimed to highlight changes in lignin decomposition as related to the potential rapid changes in microbial community composition. Since the studied paddy soils had a long history of wet rice cultivation, the microbial community should be well adapted to interchanging oxic and anoxic cycles, therefore fully expressing its activity at both conditions. In non-paddy soil changes in redox conditions caused modification of quantity and composition of the microbial community. On the contrary, in well-established paddy soils the microbial community appeared to be affected by alternating redox conditions more in quantity that in quality. Bacteria represented the largest portion of the living microorganisms, responding promptly to changes in soil redox status. However we did not detect any sign of lignin biodegradation. Relative short (3 weeks) changes in redox conditions had no effect on lignin decomposition or oxidation state. Also, lignin was not altered during oxic incubation. Since fungi represented only small portion of the microbial biomass in the studied soils, they were obviously not capable to cause much degradation, even under favourable conditions. On the contrary, changes in redox conditions strongly affected lignin extractability, regardless of the initial content and direction of change in both paddy and non-paddy soils. This was likely a result of (partial) dissolution and/or pH-induced changes of the surface properties of Fe and Mn hydrous oxides causing the release of mineral-associated lignin-derived phenols. Thus, we speculate that oxidised lignin fragments produced during the (oxic) dry period do not remain in the soils but percolate with water drainage during the flooding period.

Effect of organic matter on estuarine flocculation: a laboratory study using montmorillonite, humic acid, xanthan gum, guar gum and natural estuarine flocs.

PubMed

Furukawa, Yoko; Reed, Allen H; Zhang, Guoping

2014-01-03

Riverine particles undergo a rapid transformation when they reach estuaries. The rapid succession of hydrodynamic and biogeochemical regimes forces the particles to flocculate, settle and enter the sediment pool. The rates and magnitudes of flocculation depend on the nature of the particles which are primarily affected by the types and quantities of organic matter (OM). Meanwhile, the OM characteristics vary widely between environments, as well as within a single environment due to seasonal climate and land use variability. We investigated the effect of the OM types and quantities through laboratory experiments using natural estuarine particles from the Mississippi Sound and Atchafalaya Bay as well as model mixtures of montmorillonite and organic molecules (i.e., biopolymers (guar/xanthan gums) and humic acid). Biopolymers promote flocculation but the magnitude depends on the types and quantities. Nonionic guar gum yields much larger flocs than anionic xanthan gum, while both of them exhibit a nonlinear behavior in which the flocculation is the most pronounced at the intermediate OM loading. Moreover, the effect of guar gum is independent of salinity whereas the effect of xanthan gum is pronounced at higher salinity. Meanwhile, humic acid does not affect flocculation at all salinity values tested in this study. These results are echoed in the laboratory manipulation of the natural estuarine particles. Flocculation of the humic acid-rich Mississippi Sound particles is unaffected by the OM, whereas that of biopolymer-rich Atchafalaya Bay particles is enhanced by the OM. Flocculation is positively influenced by the presence of biopolymers that are produced as the result of marine primary production. Meanwhile, humic acid, which is abundant in the rivers that drain the agricultural soils of Southeastern United States, has little influence on flocculation. Thus, it is expected that humic acid-poor riverine particles (e.g., Mississippi River, and Atchafalaya River, to a lesser degree) may be prone to rapid flocculation and settling in the immediate vicinity of the river mouths when mixed with biopolymer-rich coastal waters. It is also expected that humic acid-rich riverine particles (e.g., Pearl River) may resist immediate flocculation and be transported further away from the river mouth.

Effect of organic matter on estuarine flocculation: a laboratory study using montmorillonite, humic acid, xanthan gum, guar gum and natural estuarine flocs

PubMed Central

2014-01-01

Background Riverine particles undergo a rapid transformation when they reach estuaries. The rapid succession of hydrodynamic and biogeochemical regimes forces the particles to flocculate, settle and enter the sediment pool. The rates and magnitudes of flocculation depend on the nature of the particles which are primarily affected by the types and quantities of organic matter (OM). Meanwhile, the OM characteristics vary widely between environments, as well as within a single environment due to seasonal climate and land use variability. We investigated the effect of the OM types and quantities through laboratory experiments using natural estuarine particles from the Mississippi Sound and Atchafalaya Bay as well as model mixtures of montmorillonite and organic molecules (i.e., biopolymers (guar/xanthan gums) and humic acid). Results Biopolymers promote flocculation but the magnitude depends on the types and quantities. Nonionic guar gum yields much larger flocs than anionic xanthan gum, while both of them exhibit a nonlinear behavior in which the flocculation is the most pronounced at the intermediate OM loading. Moreover, the effect of guar gum is independent of salinity whereas the effect of xanthan gum is pronounced at higher salinity. Meanwhile, humic acid does not affect flocculation at all salinity values tested in this study. These results are echoed in the laboratory manipulation of the natural estuarine particles. Flocculation of the humic acid-rich Mississippi Sound particles is unaffected by the OM, whereas that of biopolymer-rich Atchafalaya Bay particles is enhanced by the OM. Conclusions Flocculation is positively influenced by the presence of biopolymers that are produced as the result of marine primary production. Meanwhile, humic acid, which is abundant in the rivers that drain the agricultural soils of Southeastern United States, has little influence on flocculation. Thus, it is expected that humic acid-poor riverine particles (e.g., Mississippi River, and Atchafalaya River, to a lesser degree) may be prone to rapid flocculation and settling in the immediate vicinity of the river mouths when mixed with biopolymer-rich coastal waters. It is also expected that humic acid-rich riverine particles (e.g., Pearl River) may resist immediate flocculation and be transported further away from the river mouth. PMID:24386944

Impacts of flocculation on the distribution and diagenesis of iron in boreal estuarine sediments

NASA Astrophysics Data System (ADS)

Jilbert, Tom; Asmala, Eero; Schröder, Christian; Tiihonen, Rosa; Myllykangas, Jukka-Pekka; Virtasalo, Joonas J.; Kotilainen, Aarno; Peltola, Pasi; Ekholm, Päivi; Hietanen, Susanna

2018-03-01

Iron (Fe) plays a key role in sedimentary diagenetic processes in coastal systems, participating in various redox reactions and influencing the burial of organic carbon. Large amounts of Fe enter the marine environment from boreal river catchments associated with dissolved organic matter (DOM) and as colloidal Fe oxyhydroxides, principally ferrihydrite. However, the fate of this Fe pool in estuarine sediments has not been extensively studied. Here we show that flocculation processes along a salinity gradient in an estuary of the northern Baltic Sea efficiently transfer Fe and OM from the dissolved phase into particulate material that accumulates in the sediments. Flocculation of Fe and OM is partially decoupled. This is likely due to the presence of discrete colloidal ferrihydrite in the freshwater Fe pool, which responds differently from DOM to estuarine mixing. Further decoupling of Fe from OM occurs during sedimentation. While we observe a clear decline with distance offshore in the proportion of terrestrial material in the sedimentary particulate organic matter (POM) pool, the distribution of flocculated Fe in sediments is modulated by focusing effects. Labile Fe phases are most abundant at a deep site in the inner basin of the estuary, consistent with input from flocculation and subsequent focusing. The majority of the labile Fe pool is present as Fe (II), including both acid-volatile sulfur (AVS)-bound Fe and unsulfidized phases. The ubiquitous presence of unsulfidized Fe (II) throughout the sediment column suggests Fe (II)-OM complexes derived from reduction of flocculated Fe (III)-OM, while other Fe (II) phases are likely derived from the reduction of flocculated ferrihydrite. Depth-integrated rates of Fe (II) accumulation (AVS-Fe + unsulfidized Fe (II) + pyrite) for the period 1970-2015 are greater in the inner basin of the estuary with respect to a site further offshore, confirming higher rates of Fe reduction in near-shore areas. Mössbauer 57Fe spectroscopy shows that refractory Fe is composed largely of superparamagnetic Fe (III), high-spin Fe (II) in silicates, and, at one station, also oxide minerals derived from past industrial activities. Our results highlight that the cycling of Fe in boreal estuarine environments is complex, and that the partial decoupling of Fe from OM during flocculation and sedimentation is key to understanding the role of Fe in sedimentary diagenetic processes in coastal areas.

Examining the association of DDX compounds to sedimentary organic matter

NASA Astrophysics Data System (ADS)

Weathers, N.; Rowlett, K.; Geng, Z.; Morrison, A.; White, H. K.

2016-02-01

The association of hydrophobic organic contaminants (HOCs) with sedimentary organic matter (OM) influences their mobility and bioavailability in the environment. Determining whether these associations result from mechanisms such as sorption, chemical binding or encapsulation is critical for predicting their long-term fate. The pesticide DDT (dichlorodiphenyltrichloroethane) has been previously observed to form bound residues with sedimentary OM although the mechanisms of this association are yet to be fully explored. DDT, which was sprayed ubiquitously in the 1950s and early 1960s, can still be found in the environment today along with its three major metabolites, DDE, DDD and DDMU (collectively known as DDX compounds), and therefore presents a unique opportunity to further explore its long-term associations with OM. To this end, a sediment core from a salt marsh in Dover, Delaware known to contain DDX compounds was collected. A maximum concentration of DDX compounds was found at sediment depths corresponding to the time of the widespread usage of DDT. An initial solvent extraction with toluene provided data on the loosely associated DDX fraction followed by subsequent treatments with sulfuric acid and saponification to release DDX that was encapsulated or bound to the sedimentary matrix. Determining the physical disposition of DDX compounds that persist in sediments for several decades is integral to determining the extent to which they are mobile, bioavailable or sequestered in the marsh.

Mississippi and Atchafalaya River Influence on Sediment Porewater Chemistry

EPA Science Inventory

The Louisiana continental shelf (LCS) receives 380 km3 of freshwater per year from the Mississippi and Atchafalaya Rivers. Sources and transport of nutrients and organic matter (OM) delivered to the LCS may result in spatial variation in sediment biogeochemistry important for un...

Bromine accumulation in acidic black colluvial soils

NASA Astrophysics Data System (ADS)

Martínez Cortizas, Antonio; Ferro Vázquez, Cruz; Kaal, Joeri; Biester, Harald; Costa Casais, Manuela; Taboada Rodríguez, Teresa; Rodríguez Lado, Luis

2016-02-01

Recent investigations showed that bromine is incorporated to soil organic matter (SOM), its content increasing with humification. But few research was done on its long-term accumulation and the role played by pedogenetic processes, as those involved in organic matter stabilization. We investigated bromine content and distribution in four deep, acidic, organic-rich, Holocene soils from an oceanic area of Western Europe. Bromine concentrations (93-778 μg g-1) in the silt + clay (<50 μm) fraction were on average 3-times higher than those (17-250 μg g-1) in the fine earth (<2 mm), the former containing almost all bromine (90 ± 5%). Inventories were between 148 and 314 g m-2, indicating a rather large variability in a small area, and total estimated retention was low (6-16%). The degree of SOM bromination, expressed as the Br/C molar ratio, varied between 0.03 and 1.20 mmol Br/mol C. The ratio was highly correlated (n = 23, r2 0.88, p < 0.01) with the age of the SOM for the last ∼12 ka. Partial least squares modeling indicates that bromine concentration depends on the amount of organic matter stabilized as aluminium-OM associations, and to a lesser extent on soil acidity (pH) and iron-OM associations. Thus, at scales of thousands of years, bromine accumulation in acidic soils is linked to the pool of metal-clay-stabilized organic matter.

Differential arsenic binding in the sediments of two sites in Chile's lower Loa River basin.

PubMed

Bugueño, Manuel P; Acevedo, Sara E; Bonilla, Carlos A; Pizarro, Gonzalo E; Pasten, Pablo A

2014-01-01

Fluvial sediments from two lower Loa River basin sites in northern Chile were compared in order to probe the effects of vegetation and organic matter (OM) on As accumulation in fluvial environments. The two sites were the Sloman dam, which lacks macrophytes and has a low OM content (2.4%) in sediments, and the Quillagua Oasis, which is 23 km downstream from the Sloman site and has a higher OM (6.2%) in sediments and abundant aquatic plant life. The Quillagua site had preferential As enrichment with a co-occurrence pattern that differed from that of the Sloman site, which had a lower As concentration (1528 vs. 262 mg/kg d.w., respectively). At the Quillagua site, As concentration was strongly correlated with Mn and OM (r = 0.91 and 0.85, respectively); while at the Sloman site, As concentration in sediments was significantly correlated with Ca and Sr (r = 0.63 and 0.54, respectively). Sequential extraction analyses showed that the Sloman site had higher percentage of easily exchangeable As within the surface sediment (12%, 45 mg/kg d.w.) compared with the Quillagua site (3%, 40 mg/kg d.w.). These contrasting results suggest that both vegetation and OM control the immobilization and accumulation of As in the arid Loa River basin. © 2013 Elsevier B.V. All rights reserved.

SOA formation from partitioning and heterogeneous reactions: model study in the presence of inorganic species.

PubMed

Jang, Myoseon; Czoschke, Nadine M; Northcross, Amanda L; Cao, Gang; Shaof, David

2006-05-01

A predictive model for secondary organic aerosol (SOA) formation by both partitioning and heterogeneous reactions was developed for SOA created from ozonolysis of alpha-pinene in the presence of preexisting inorganic seed aerosols. SOA was created in a 2 m3 polytetrafluoroethylene film indoor chamber under darkness. Extensive sets of SOA experiments were conducted varying humidity, inorganic seed compositions comprising of ammonium sulfate and sulfuric acid, and amounts of inorganic seed mass. SOA mass was decoupled into partitioning (OM(P)) and heterogeneous aerosol production (OM(H)). The reaction rate constant for OM(H) production was subdivided into three categories (fast, medium, and slow) to consider different reactivity of organic products for the particle phase heterogeneous reactions. The influence of particle acidity on reaction rates was treated in a previous semiempirical model. Model OM(H) was developed with medium and strong acidic seed aerosols, and then extrapolated to OM(H) in weak acidic conditions, which are more relevant to atmospheric aerosols. To demonstrate the effects of preexisting glyoxal derivatives (e.g., glyoxal hydrate and dimer) on OM(H), SOA was created with a seed mixture comprising of aqueous glyoxal and inorganic species. Our results show that heterogeneous SOA formation was also influenced by preexisting reactive glyoxal derivatives.

Vaporization chemistry of hypo-stoichiometric (U,Pu)O 2

NASA Astrophysics Data System (ADS)

Viswanathan, R.; Krishnaiah, M. V.

2001-04-01

Calculations were performed on hypo-stoichiometric uranium plutonium di-oxide to examine its vaporization behavior as a function of O/ M ( M= U+ Pu) ratio and plutonium content. The phase U (1- y) Pu yO z was treated as an ideal solid solution of (1- y)UO 2+ yPuO (2- x) such that x=(2- z)/ y. Oxygen potentials for different desired values of y, z, and temperature were used as the primary input to calculate the corresponding partial pressures of various O-, U-, and Pu-bearing gaseous species. Relevant thermodynamic data for the solid phases UO 2 and PuO (2- x) , and the gaseous species were taken from the literature. Total vapor pressure varies with O/M and goes through a minimum. This minimum does not indicate a congruently vaporizing composition. Vaporization behavior of this system can at best be quasi-congruent. Two quasi-congruently vaporizing compositions (QCVCs) exist, representing the equalities (O/M) vapor=(O/M) mixed-oxide and (U/Pu) vapor=(U/Pu) mixed-oxide, respectively. The (O/M) corresponding to QCVC1 is lower than that corresponding to QCVC2, but very close to the value where vapor pressure minimum occurs. The O/M values of both QCVCs increase with decrease in plutonium content. The vaporization chemistry of this system, on continuous vaporization under dynamic condition, is discussed.

Connecting marine productivity to sea-spray via nanoscale biological processes: Phytoplankton Dance or Death Disco?

NASA Astrophysics Data System (ADS)

O'Dowd, Colin; Ceburnis, Darius; Ovadnevaite, Jurgita; Bialek, Jakub; Stengel, Dagmar B.; Zacharias, Merry; Nitschke, Udo; Connan, Solene; Rinaldi, Matteo; Fuzzi, Sandro; Decesari, Stefano; Cristina Facchini, Maria; Marullo, Salvatore; Santoleri, Rosalia; Dell'Anno, Antonio; Corinaldesi, Cinzia; Tangherlini, Michael; Danovaro, Roberto

2015-10-01

Bursting bubbles at the ocean-surface produce airborne salt-water spray-droplets, in turn, forming climate-cooling marine haze and cloud layers. The reflectance and ultimate cooling effect of these layers is determined by the spray’s water-uptake properties that are modified through entrainment of ocean-surface organic matter (OM) into the airborne droplets. We present new results illustrating a clear dependence of OM mass-fraction enrichment in sea spray (OMss) on both phytoplankton-biomass, determined from Chlorophyll-a (Chl-a) and Net Primary Productivity (NPP). The correlation coefficient for OMss as a function of Chl-a increased form 0.67 on a daily timescale to 0.85 on a monthly timescale. An even stronger correlation was found as a function of NPP, increasing to 0.93 on a monthly timescale. We suggest the observed dependence is through the demise of the bloom, driven by nanoscale biological processes (such as viral infections), releasing large quantities of transferable OM comprising cell debris, exudates and other colloidal materials. This OM, through aggregation processes, leads to enrichment in sea-spray, thus demonstrating an important coupling between biologically-driven plankton bloom termination, marine productivity and sea-spray modification with potentially significant climate impacts.

Sorption, photodegradation, and chemical transformation of naproxen and ibuprofen in soils and water.

PubMed

Vulava, Vijay M; Cory, Wendy C; Murphey, Virginia L; Ulmer, Candice Z

2016-09-15

Pharmaceutically active compounds (PhACs) are released into the environment where they undergo soil sorption, photodegradation, and chemical transformation into structurally similar compounds. Here we report on studies of naproxen (NAP) and ibuprofen (IBP), two widely-used nonsteroidal anti-inflammatory drugs (NSAIDS), in soils and water. Organic matter (OM) was observed to play an important role in each of these processes. Sorption was observed to be stronger and nonlinear in higher OM soils while weaker but still significant in lower OM, higher clay soils; the amphiphilic nature of these two PhACs combined with the complex charged and nonpolar surfaces available in the soil was observed to control the sorption behavior. Simulated solar photodegradation rates of NAP and IBP in water were observed to change in the presence of humic acid or fulvic acid. Structural analogs of each compound were observed as the result of chemical transformation in both photoexposed aqueous solutions and non-photoexposed soil. Two of these transformation products were detected as both soil and photo transformation products for both PhACs. OM was observed to influence the chemical transformation of both pharmaceuticals. Copyright © 2016 Elsevier B.V. All rights reserved.

Compositional changes of reservoir rocks through the injection of supercritical CO2

NASA Astrophysics Data System (ADS)

Scherf, Ann-Kathrin; Schulz, Hans-Martin; Zetzl, Carsten; Smirnova, Irina; Andersen, Jenica; Vieth, Andrea

2010-05-01

The European project CO2SINK is the first project on the on-shore underground storage of carbon dioxide in Europe. CO2SINK is part of the ongoing efforts to understand the impact, problems, and likelihood of using deep saline aquifers for long term storage of CO2. In Ketzin (north-east Germany, 40 km west of Berlin) a saline sandstone aquifer of the younger Triassic (Stuttgart Formation) has been chosen as a reservoir for the long-term storage of carbon dioxide. Our monitoring focuses on the composition and mobility of the organic carbon pools within the saline aquifer and their changes due to the storage of carbon dioxide. Supercritical carbon dioxide is known as an excellent solvent of non- to moderately polar organic compounds, depending on temperature and pressure (Hawthorne, 1990). The extraction of organic matter (OM) from reservoir rock, using multiple extraction methods, allows insight into the composition of the OM and the biomarker inventory of the deep biosphere. The extraction of reservoir rock using supercritical CO2 may additionally simulate the impact of CO2 storage on the deep biosphere by the possible mobilisation of OM. We will present compound specific results from laboratory CO2 extraction experiments on reservoir rocks from the CO2 storage site in Ketzin, Germany. A total of five rock samples (silt and sandstones) from the injection well and two observation wells were applied to supercritical CO2 extraction. In the experimental setup, a supercritical fluid extractor is used to simulate the conditions within the saline aquifer. The results show distinct quantitative and qualitative differences in extraction yields between the rock samples. This may be due to differences in mineralogy and porosity (12 - 27%; Norden et al., 2007a, b, c), which seem to be extraction-controlling key factors. Furthermore, the results illustrate that the amount of extracted materials depends on the length of the time interval in which CO2 flows through the rock, rather than saturation of extracted compounds in the solvent when CO2 is stationary. Total extraction yields seem to be low compared to the OM present in the reservoir rock, but yields still have to be extrapolated to the large volumes of reservoir rock that are in contact with supercritical CO2 at the test site. In the future, our lab results may be combined with models to determine how much of the mobilised organic acids and non organic material will occupy the entire reservoir (pore space) or could be used by organisms and induce growth. Additionally, the rock samples were analysed after the extraction with supercritical CO2, using a variety of organic and inorganic geochemical techniques. Thus, changes in the composition of the rocks were also observed. Here, amongst others, scanning electron microscopy was done and indicated corrosion effects on mineral surfaces due to exposure to supercritical CO2. References Hawthorne, S.B. (1990) Analytical Chemistry 62, 633-642. Norden, B. (2007a) Geologischer Abschlussbericht der Bohrung CO2 Ktzi 200/2007. Norden, B. (2007b) Geologischer Abschlussbericht der Bohrung CO2 Ktzi 201/2007. Norden, B. (2007c) Geologischer Abschlussbericht der Bohrung CO2 Ktzi 202/2007.

Fate of small charred particles in soils - importance of aggregation

NASA Astrophysics Data System (ADS)

Mueller, C. W.; Pechenkina, N.; Grünz, G.; Kölbl, A.; Steffens, M.; Heister, K.; Kögel-Knabner, I.

2009-04-01

Historic and recent fires affect a broad range of terrestrial ecosystems and are reflected in the composition of soil organic matter (SOM). Although the assignments of different sources and pools of black carbon (BC) are still under debate, the importance of BC for carbon (C) storage, nutrient supply and contaminant sorption is well recognized. Nevertheless, how processes of encapsulation of BC into aggregates may influence fate and properties of BC still needs further research. We observed small highly aromatic particulate OM (oPOMsmall, <20 µm) exclusively occluded within aggregates in a range of soils. As these particles were absent in the inter-aggregate soil space the question of the importance of soil aggregation for the fate of these particles is raised. In the presented study we analysed intact soil aggregates and the distribution of highly aromatic micro-scale charred particles and mineral bound SOM in Haplic Chernozems from Central Russia. We fractionated the soils by means of density to obtain particulate and mineral bound SOM fractions. The chemical composition of the obtained fractions was studied by solid-state 13C-NMR spectroscopy and energy dispersive X-ray spectroscopy (EDX). For visualization of the particles and aggregates we used scanning electron microscopy (SEM) and nano-scale secondary ion mass spectrometry (NanoSIMS). The importance of oxides for aggregate formation was elucidated by analyses of extractable Fe. Furthermore, we incubated the oPOMsmall fraction at 20°C in batch experiments to study the aggregate formation of charred particles with time. To track the fate of OM on new formed aggregates, we used a labelled amino acid mixture (min. 98 atom% 13C and 15N) as readily bioavailable OM input and isotopic tracer. The matrix of the intact soil aggregates, embedded in epoxy resin, was dominated by densely packed clay particles. At all depths particulate SOM was quantitatively dominated by the aromatic oPOM fractions, inter-aggregate POM was almost absent at higher depths. The oPOMsmall showed mainly amorphous structures and very few plant tissue structures as revealed by SEM. The oPOMsmall fraction showed a drastic increase in the content of aromatic C with depth along with decreasing aliphatic C in the thick A horizons. Almost the entire OM of the oPOMsmall fraction was composed of aromatic C compounds in the AB horizons. The incubation experiment with particles from the oPOMsmall fraction revealed a fast aggregate formation in water within a few days. With the isotopic sensitivity of the NanoSIMS 50, we were able to show spatial heterogeneous enrichments in 13C and 15N on new formed aggregates of aromatic particles.

Biodiversity management of organic orchard enhances both ecological and economic profitability.

PubMed

Meng, Jie; Li, Lijun; Liu, Haitao; Li, Yong; Li, Caihong; Wu, Guanglei; Yu, Xiaofan; Guo, Liyue; Cheng, Da; Muminov, Mahmud A; Liang, Xiaotian; Jiang, Gaoming

2016-01-01

Organic farming has been regarded as an alternative solution for both agricultural sustainability and human health maintenance. Few researches have concentrated on the differences of biodiversity and eco-economic benefits between organic and conventional orchards. Organic management (OM) of orchards mainly includes taking advantage of natural enemies and beneficial weeds as well as soil organisms and controlling harmful pests. Here we conducted a three-year experiment on the effects of managing biodiversity in an organic apple orchard, using cattle manure to enrich soil biota, propagating native plant to suppress weeds and applying ecological pest management to control pests. The effect was assessed against the conventional management (CM) model. We found that OM enhanced soil organic carbon, total nitrogen, microbial biomass carbon and nitrogen. The 16S rDNA high-throughput sequencing results indicated that the dominant bacterial phyla of the top soil were Proteobacteria and Actinobacteria, and OM had richer bacteria diversity with a 7% higher Shannon's index than the CM. In particular, the relative abundance of rhizobium in the OM was higher than that of the CM. For OM, Duchesnea indica was an ideal ground-cover plant to control weeds through winning the niche competition and thus decreased weeds' Simpson, Shannon-Wiener and Pielou index by 38.2%, 53.8% and 16.9% separately. The phototactic pests' weight and scarab beetle's population were effectively decreased by 35% and 86% respectively through long time control and prevention. OM had an average of 20 times more earthworms than CM, and the maximum density had reached 369 m(-2) (0-20 cm soil). The dominant earthworm species of the OM were detritivores which preferring soil with high organic matter content. Due to no synthetic chemicals being used, the OM produced much safer apple fruits which were sold at high prices. Economically, up to a 103% increase of output-input ratio had been achieved in the OM. Our study clearly demonstrated that biodiversity management without chemical pollution increased the biodiversity of beneficial organisms, reduced antagonists of the fruit tree, and enhanced economic benefits of the apple orchard.

Biodiversity management of organic orchard enhances both ecological and economic profitability

PubMed Central

Meng, Jie; Li, Lijun; Liu, Haitao; Li, Yong; Li, Caihong; Wu, Guanglei; Yu, Xiaofan; Guo, Liyue; Cheng, Da; Muminov, Mahmud A.; Liang, Xiaotian

2016-01-01

Organic farming has been regarded as an alternative solution for both agricultural sustainability and human health maintenance. Few researches have concentrated on the differences of biodiversity and eco-economic benefits between organic and conventional orchards. Organic management (OM) of orchards mainly includes taking advantage of natural enemies and beneficial weeds as well as soil organisms and controlling harmful pests. Here we conducted a three-year experiment on the effects of managing biodiversity in an organic apple orchard, using cattle manure to enrich soil biota, propagating native plant to suppress weeds and applying ecological pest management to control pests. The effect was assessed against the conventional management (CM) model. We found that OM enhanced soil organic carbon, total nitrogen, microbial biomass carbon and nitrogen. The 16S rDNA high-throughput sequencing results indicated that the dominant bacterial phyla of the top soil were Proteobacteria and Actinobacteria, and OM had richer bacteria diversity with a 7% higher Shannon’s index than the CM. In particular, the relative abundance of rhizobium in the OM was higher than that of the CM. For OM, Duchesnea indica was an ideal ground-cover plant to control weeds through winning the niche competition and thus decreased weeds’ Simpson, Shannon–Wiener and Pielou index by 38.2%, 53.8% and 16.9% separately. The phototactic pests’ weight and scarab beetle’s population were effectively decreased by 35% and 86% respectively through long time control and prevention. OM had an average of 20 times more earthworms than CM, and the maximum density had reached 369 m−2 (0–20 cm soil). The dominant earthworm species of the OM were detritivores which preferring soil with high organic matter content. Due to no synthetic chemicals being used, the OM produced much safer apple fruits which were sold at high prices. Economically, up to a 103% increase of output–input ratio had been achieved in the OM. Our study clearly demonstrated that biodiversity management without chemical pollution increased the biodiversity of beneficial organisms, reduced antagonists of the fruit tree, and enhanced economic benefits of the apple orchard. PMID:27366643

Evaluation of alternative mulches for blueberry over five production seasons

USDA-ARS?s Scientific Manuscript database

Highbush blueberry (Vaccinium corymbosum L.) is a calcifuge (acid-loving) plant that responds favorably to mulching with organic matter (OM). Until recently, most blueberry plantings in our region were grown with a mulch of douglas-fir sawdust, with additional nitrogen (N) fertilizer applied to comp...

Contribution of Allochthonous Carbon to American Shad Production in the Mattaponi River, Virginia, Using Stable Isotopes

EPA Science Inventory

Our objective was to quantify the contribution of autochthonous, locally-produced phytoplankton, and allochthonous, terrestrial-derived organic matter (OM) to the production of young-of-year (YOY) American shad using stable isotopes...The results suggest an important link between...

Unpacking paleoenvironmental change across OAE2 using paired d34S records of pyrite and organic matter

NASA Astrophysics Data System (ADS)

Raven, M. R.; Gomes, M.; Fike, D. A.

2017-12-01

Pyrite sulfur isotopes have proven to be a powerful tool for reconstructing major changes in global redox state and the emergence of microbial metabolisms. Still, pyrite can be a challenging archive, as its formation depends on the availability of reactive iron species and can occur over multiple generations of sedimentary processes. Accordingly, pyrite δ34S records commonly have large point-to-point variability reflecting local processes. By pairing pyrite δ34S records with those of coexisting organic matter (OM), including both kerogens and extractable bitumens, we can begin to parse the various potential causes of this variability and gain greater insights into changes in the sedimentary paleoenvironment. Here, we present the first collection of records of OM δ34S for the Cretaceous, focusing on sections spanning Ocean Anoxic Event 2 (OAE2, 94 Mya), a period of globally widespread marine anoxia and carbon cycle disruption. In carbonates and shales from OAE2 in Pont d'Issole, France, pyrite and OM δ34S values vary in parallel throughout most of the section, consistent with their shared sulfide source. There are also distinct exceptions: In one interval, an excursion in pyrite δ34S is entirely absent from the organic sulfur record but associated with unusual organic sulfur redox speciation (by XAS), potentially reflecting later exposure to oxic porewaters. Across the core interval of shale deposition during OAE2, the offset between pyrite and OM δ34S values declines smoothly from +17.4 to -7.9‰, which we interpret in terms of changes in the speciation of detrital iron minerals that may have regional implications. We then compare these results with data for other well-characterized OAE2 sections, including Cismon (Italy), Tarfaya (Morocco), and the Demerara Rise (offshore Brazil), which represent environments with a variety of apparent redox states. These paired pyrite - OM δ34S profiles yield new information about how the local and global forcings associated with OAE2 impacted environmental redox states, which in turn drove major changes in microbial energy cycling and sulfur and carbon burial fluxes during this critical period of Earth history.

Reconciling drainage and receiving basin signatures of the Godavari River system

NASA Astrophysics Data System (ADS)

Ojoshogu Usman, Muhammed; Kirkels, Frédérique Marie Sophie Anne; Zwart, Huub Michel; Basu, Sayak; Ponton, Camilo; Blattmann, Thomas Michael; Ploetze, Michael; Haghipour, Negar; McIntyre, Cameron; Peterse, Francien; Lupker, Maarten; Giosan, Liviu; Eglinton, Timothy Ian

2018-06-01

The modern-day Godavari River transports large amounts of sediment (170 Tg per year) and terrestrial organic carbon (OCterr; 1.5 Tg per year) from peninsular India to the Bay of Bengal. The flux and nature of OCterr is considered to have varied in response to past climate and human forcing. In order to delineate the provenance and nature of organic matter (OM) exported by the fluvial system and establish links to sedimentary records accumulating on its adjacent continental margin, the stable and radiogenic isotopic composition of bulk OC, abundance and distribution of long-chain fatty acids (LCFAs), sedimentological properties (e.g. grain size, mineral surface area, etc.) of fluvial (riverbed and riverbank) sediments and soils from the Godavari basin were analysed and these characteristics were compared to those of a sediment core retrieved from the continental slope depocenter. Results show that river sediments from the upper catchment exhibit higher total organic carbon (TOC) contents than those from the lower part of the basin. The general relationship between TOC and sedimentological parameters (i.e. mineral surface area and grain size) of the sediments suggests that sediment mineralogy, largely driven by provenance, plays an important role in the stabilization of OM during transport along the river axis, and in the preservation of OM exported by the Godavari to the Bay of Bengal. The stable carbon isotopic (δ13C) characteristics of river sediments and soils indicate that the upper mainstream and its tributaries drain catchments exhibiting more 13C enriched carbon than the lower stream, resulting from the regional vegetation gradient and/or net balance between the upper (C4-dominated plants) and lower (C3-dominated plants) catchments. The radiocarbon contents of organic carbon (Δ14COC) in deep soils and eroding riverbanks suggests these are likely sources of old or pre-aged carbon to the Godavari River that increasingly dominates the late Holocene portion of the offshore sedimentary record. While changes in water flow and sediment transport resulting from recent dam construction have drastically impacted the flux, loci, and composition of OC exported from the modern Godavari basin, complicating reconciliation of modern-day river basin geochemistry with that recorded in continental margin sediments, such investigations provide important insights into climatic and anthropogenic controls on OC cycling and burial.

Structural stability, microbial biomass and community composition of sediments affected by the hydric dynamics of an urban stormwater infiltration basin. Dynamics of physical and microbial characteristics of stormwater sediment.

PubMed

Badin, Anne Laure; Monier, Armelle; Volatier, Laurence; Geremia, Roberto A; Delolme, Cécile; Bedell, Jean-Philippe

2011-05-01

The sedimentary layer deposited at the surface of stormwater infiltration basins is highly organic and multicontaminated. It undergoes considerable moisture content fluctuations due to the drying and inundation cycles (called hydric dynamics) of these basins. Little is known about the microflora of the sediments and its dynamics; hence, the purpose of this study is to describe the physicochemical and biological characteristics of the sediments at different hydric statuses of the infiltration basin. Sediments were sampled at five time points following rain events and dry periods. They were characterized by physical (aggregation), chemical (nutrients and heavy metals), and biological (total, bacterial and fungal biomasses, and genotypic fingerprints of total bacterial and fungal communities) parameters. Data were processed using statistical analyses which indicated that heavy metal (1,841 μg/g dry weight (DW)) and organic matter (11%) remained stable through time. By contrast, aggregation, nutrient content (NH₄⁺, 53-717 μg/g DW), pH (6.9-7.4), and biological parameters were shown to vary with sediment water content and sediment biomass, and were higher consecutive to stormwater flows into the basin (up to 7 mg C/g DW) than during dry periods (0.6 mg C/g DW). Coinertia analysis revealed that the structure of the bacterial communities is driven by the hydric dynamics of the infiltration basin, although no such trend was found for fungal communities. Hydric dynamics more than rain events appear to be more relevant for explaining variations of aggregation, microbial biomass, and shift in the microbial community composition. We concluded that the hydric dynamics of stormwater infiltration basins greatly affects the structural stability of the sedimentary layer, the biomass of the microbial community living in it and its dynamics. The decrease in aggregation consecutive to rewetting probably enhances access to organic matter (OM), explaining the consecutive release of NH₄⁺, the bloom of the microbial biomass, and the change in structure of the bacterial community. These results open new perspectives for basin management since the risk of OM and pollutant transfer to the aquifer is greatly affected by alternating dry and flood periods.

Urbanization and obesity in The Gambia: a country in the early stages of the demographic transition.

PubMed

Siervo, M; Grey, P; Nyan, O A; Prentice, A M

2006-04-01

To investigate the distribution of overweight and obesity and its relationship with socio-economic and behavioural factors in a developing-country population undergoing rapid nutritional transition. Cross-sectional house-to-house survey in urban Gambia. Four groups of 50 subjects were sampled as follows: young men (YM, 14-25 years), young women (YW, 14-25 years), older men (OM, 35-50 years) and older women (OW, 35-50 years). Several socio-economic and behavioural factors were investigated. Composite indices for socio-economic status, education, healthy lifestyle and western influences were created. Body weight, height, waist and hip circumferences were measured and body mass index (BMI) was calculated. Body composition was assessed by leg-to-leg bioimpedance. Overweight was defined as BMI=25.0-29.9 kg/m(2) and obesity as BMI>or=30.0 kg/m(2). There were highly significant gender and age differences in overweight (YM=0%, YW=10%, OM=6% and OW=34%) and obesity (YM=0%, YW=4%, OM=6% and OW=50%). Only 16% of OW were neither overweight nor obese compared to 88% of OM. OW had a higher fat mass percent (38.4%) than other groups, while fat-free mass (kg) was significantly higher in males than females with YW having the lowest value. Young generations were more educated and more influenced by western ideals than OM and OW. Weight gain was not always associated with weight concern and many overweight/obese subjects did not perceive themselves as overweight. Social and behavioural changes are already creating a perceptible 'generational gap' among this population undergoing rapid transition. The improved education and current lean status of the younger adults offers opportunities for preventative interventions. These need to be specially targeted at women.

Sugarcane bagasse as exclusive roughage for dairy cows in smallholder livestock system.

PubMed

de Almeida, Gleidiana Amélia Pontes; de Andrade Ferreira, Marcelo; de Lima Silva, Janaina; Chagas, Juana Catarina Cariri; Véras, Antônia Sherlânea Chaves; de Barros, Leonardo José Assis; de Almeida, Gledson Luiz Pontes

2018-03-01

The study aimed to evaluate sugarcane bagasse as roughage in lactating cow on feed intake, digestibility, ingestive behavior, milk production and composition, and microbial protein synthesis. Ten Girolando cows at initial body weight of 450±25.6 kg and at 143.7±30.7 days in milk were assigned in two 5×5 Latin square designs. Five 21-day experimental periods were adopted (1° to 14-day: diets adaptation period; 15° to 21-day: data collection and sampling period). The diets consisted of four different levels of sugarcane bagasse (45%, 50%, 55%, and 60%) and a control diet, commonly adopted in the region, based on spineless cactus (25% sugarcane bagasse), formulated to meet 12 kg/d milk yield. The dry matter (DM), organic matter (OM), and total digestible nutrients intakes and DM and OM digestibilities observed for 45% and 50% bagasse inclusion were similar to control diet, while that 55% and 60% bagasse inclusion were lower. Cows fed control diet, and bagasse diets of 45%, and 50% levels had the nutritional requirements attended, that guaranteed 12 kg/d of milk yield. The crude protein intake and digestibility of cows fed 45%, 50%, and 55% of bagasse inclusion were similar to control diet. The neutral detergent fiber (NDF) intake and digestibility differ for all bagasse diets related to control diet, while the non-fiber carbohydrates intake and digestibility for cows fed 45% of bagasse were similar for control diet. The intakes and digestibilities of nutrients decreased linearly in function of bagasse inclusion; NDF and indigestible NDF intakes did not vary. The ruminating time, feeding and rumination efficiency, microbial protein synthesis and milk yield decreased linearly with sugarcane bagasse inclusion. Sugarcane bagasse decreases milk production; however, its inclusion level in between 45% to 50% associated to concentrate could replace diets based on spineless cactus for crossbred dairy cow's producing 12 kg/d of milk.

Sugarcane bagasse as exclusive roughage for dairy cows in smallholder livestock system

PubMed Central

2018-01-01

Objective The study aimed to evaluate sugarcane bagasse as roughage in lactating cow on feed intake, digestibility, ingestive behavior, milk production and composition, and microbial protein synthesis. Methods Ten Girolando cows at initial body weight of 450±25.6 kg and at 143.7±30.7 days in milk were assigned in two 5×5 Latin square designs. Five 21-day experimental periods were adopted (1° to 14-day: diets adaptation period; 15° to 21-day: data collection and sampling period). The diets consisted of four different levels of sugarcane bagasse (45%, 50%, 55%, and 60%) and a control diet, commonly adopted in the region, based on spineless cactus (25% sugarcane bagasse), formulated to meet 12 kg/d milk yield. Results The dry matter (DM), organic matter (OM), and total digestible nutrients intakes and DM and OM digestibilities observed for 45% and 50% bagasse inclusion were similar to control diet, while that 55% and 60% bagasse inclusion were lower. Cows fed control diet, and bagasse diets of 45%, and 50% levels had the nutritional requirements attended, that guaranteed 12 kg/d of milk yield. The crude protein intake and digestibility of cows fed 45%, 50%, and 55% of bagasse inclusion were similar to control diet. The neutral detergent fiber (NDF) intake and digestibility differ for all bagasse diets related to control diet, while the non-fiber carbohydrates intake and digestibility for cows fed 45% of bagasse were similar for control diet. The intakes and digestibilities of nutrients decreased linearly in function of bagasse inclusion; NDF and indigestible NDF intakes did not vary. The ruminating time, feeding and rumination efficiency, microbial protein synthesis and milk yield decreased linearly with sugarcane bagasse inclusion. Conclusion Sugarcane bagasse decreases milk production; however, its inclusion level in between 45% to 50% associated to concentrate could replace diets based on spineless cactus for crossbred dairy cow's producing 12 kg/d of milk. PMID:29059720

Origin of particulate organic matter exported during storm events in a forested headwater catchment.

NASA Astrophysics Data System (ADS)

Jeanneau, Laurent; Rowland, Richard D.; Inamdar, Shreeram P.

2016-04-01

Particulate organic matter (POM) plays an important biogeochemical role towards ecology, ecotoxicology and carbon cycle. Moreover POM within the fluvial suspended sediment load during infrequent high flows can comprise a larger portion of long-term flux than dissolved species. It is well documented that storm events that constituted only 10-20% of the year contributed to >80% of POC exports. But the origin and composition of POM transferred during those hot moments remained unclear. In order to improve our knowledge on this topic we explore the variability in storm event-transported sediments' POM content and source down a continuum of catchment drainage locations. Wetland, upland and forest O horizons, litter, river banks and bed sediments were analyzed for their content in organic C, isotopic (13C) and molecular (thermochemiolysis-gas chromatography-mass spectrometry) fingerprints. The isotopic and molecular fingerprints recorded in suspended and deposited (differentiated into fine, medium and coarse particles) sediments sampled during different storm events down a continuum of catchment drainage locations (12 and 79 ha). This study highlights compositional differences between the catchment size (12 versus 79 ha), the particle size of deposited sediment (fine versus medium versus coarse) and the sampling time during a storm event (rising limb versus peak flow versus falling limb). Two sampling strategies were used. Suspended sediments sampled at a specific time during flood events allow evaluating changes along the hydrograph, while deposited sediments that integrate the entire event allow making comparisons with drainage scale. For deposited sediments, the proportion of OM coming from the endmembers wetland, litter and Forest O horizon decreases from the 12ha to the 79ha catchment, which exhibited a higher proportion of OM coming from stream bed sediment and river banks. For both catchments, from fine to coarse particles, the influence of stream bed sediments and river banks decreases while the influence of Forest O horizon increases. For suspended sediments, the evolution during storm events were opposite in the 12ha and the 79ha catchments. In the 12ha catchment, during the rising limb of the hydrograph, POM seems to be inherited from stream bed sediments and river banks, while from the rising limb to the peak flow, the influence of litter and/or wetland increases. This influence decreases during the falling limb. The opposite trend was observed in the 79ha catchment, with an increasing contribution of stream bed sediments to the OM exported during a storm event. What is the information to take away? First POM transferred in headwater catchments has multiple sources. Secondly, the combination of those sources is different along the size continuum of particles. Then, down a continuum of catchment drainage locations, the combination of sources changes both along the size continuum and during storm events. This information is critical for identifying the various drivers and mechanisms behind POM transport and for understanding the impacts of POM on aquatic metabolism and downstream water quality.

Stabilization of ancient organic matter in deep buried paleosols

NASA Astrophysics Data System (ADS)

Marin-Spiotta, E.; Chaopricha, N. T.; Mueller, C.; Diefendorf, A. F.; Plante, A. F.; Grandy, S.; Mason, J. A.

2012-12-01

Buried soils representing ancient surface horizons can contain large organic carbon reservoirs that may interact with the atmosphere if exposed by erosion, road construction, or strip mining. Paleosols in long-term depositional sites provide a unique opportunity for studying the importance of different mechanisms on the persistence of organic matter (OM) over millennial time-scales. We report on the chemistry and bioavailability of OM stored in the Brady soil, a deeply buried (7 m) paleosol in loess deposits of southwestern Nebraska, USA. The Brady Soil developed 9,000-13,500 years ago during a time of warming and drying. The Brady soil represents a dark brown horizon enriched in C relative to loess immediately above and below. Spanning much of the central Great Plains, this buried soil contains large C stocks due to the thickness of its A horizon (0.5 to 1 m) and wide geographic extent. Our research provides a unique perspective on long-term OM stabilization in deep soils using multiple analytical approaches. Soils were collected from the Brady soil A horizon (at 7 m depth) and modern surface A horizons (0-15 cm) at two sites for comparison. Soils were separated by density fractionation using 1.85 g ml-1 sodium polytungstate into: free particulate organic matter (fPOM) and aggregate-occluded (oPOM) of two size classes (large: >20 μm, and small: < 20 μm). The remaining dense fraction was separated into sand, silt, and clay size fractions. The distribution and age of C among density and particle-size fractions differed between surface and Brady soils. We isolated the source of the characteristic dark coloring of the Brady soil to the oPOM-small fraction, which also contained 20% of the total organic C pool in the Brady soil. The oPOM-small fraction and the bulk soil in the middle of the Brady A horizon had 14C ages of 10,500-12,400 cal yr BP, within the time that the soil was actively forming at the land surface. Surface soils showed modern ages. Lipid analyses of the Brady soil indicate a predominance of terrestrial vegetation biomarkers. The strong presence of vascular plant-derived terpenoids and long-chain n-alkyl lipids suggest a grassland origin. Respiration rates of the buried soil in a laboratory incubation were negligible compared to modern surface A and B horizons, and responded little to wetting. These results suggest that moisture alone does not limit decomposition in the buried soil, at least over the 120-day incubation. Solid-state 13C-NMR spectroscopy reveals that the Brady soil is enriched in aromatic C, with high contributions of char, especially in the oPOM-small fraction. Thermal analysis showed high thermal stability of oPOM-small and bulk soils in the Brady soil compared to modern surface horizons. Radiocarbon ages and chemical composition of OM isolated from a deep paleosol suggest little modification since burial and may indicate rapid stabilization of plant-derived organic C by burial. The accumulation of char in the aggregate-protected fraction of the Brady soil provides additional evidence for warming and drying conditions during the time of loess deposition at this site. Developing a better understanding of the mechanisms that control long-term SOM stabilization is important for understanding how soil C is sequestered over millennia and for predicting how future disturbances may affect deep soil C.

Physical factors controlling carbon cycling dynamics in blackwater river-dominated and particle dominated estuaries

NASA Astrophysics Data System (ADS)

Arellano, A. R.; Bianchi, T. S.; Osburn, C. L.; D'Sa, E. J.; Oviedo-Vargas, D.; Ward, N. D.; Joshi, I.

2017-12-01

While most blue carbon habitat (wetlands, seagrass beds and mangroves) research has focused on carbon burial/stocks and habitat fragmentation of these communities, few studies have examined physical factors that control exports and losses of blue carbon sources of organic matter (OM) to adjacent coastal waters. Here, we report on spatiotemporal changes in the composition and concentration of dissolved organic carbon (DOC), particulate organic carbon (POC), particulate nitrogen, pCO2, δ13C-DOC, δ13C-POC, δ13C-CO2, dissolved lignin-phenols (dΣ8), particulate lignin-phenols (pΣ8) and carbon normalized dissolved and particulate lignin phenol yields (dΛ8 and pΛ8) in surface waters of the Apalachicola and Barataria bays in the Gulf of Mexico. Discriminant analysis described spatial variability along canonical axis I (24.4%) while temporal variability was explained by canonical axis II (23.2%). Apalachicola Bay was low in POC concentration and characterized by high values for pCO2, DOC, C:N, dΣ8 and (Ad:Al)V. The latter three parameters indicated a clear terrestrial source of OM at Apalachicola Bay reflecting the importance of riverine DOM inputs in this system. In contrast, Barataria Bay was characterized by high values for POC, C:V, S:V, and δ13C-POC, indicating blue-carbon sources due to a lack of direct river inputs and high prevalence of wetlands, some recently submerged. Extreme weather, such as intense precipitation events in Apalachicola Bay and enhanced northerly winds in Barataria Bay were characterized by δ13C-CO2, dΛ8, C:V (Barataria), and C:N (Apalachicola). Results indicate that such physical factors can exert strong control on OM sources and sinks across the gradient of coastal wetlands and shelf waters and lead to enhanced transfer and degradation of wetland-derived blue carbon in coastal waters.

Effects of the soil-forming factors climate and time on soils of Mount Cameroon (Central Africa)

NASA Astrophysics Data System (ADS)

Sauer, Daniela; Nguetnkam, Jean Pierre; Tenzer, Selina; Herrmann, Ludger; Rennert, Thilo

2017-04-01

Knowledge on rates of soil-forming processes in humid-tropical climate is limited, mainly because objects that are suitable for studying soil chronosequences are rare in tropical regions. Mt. Cameroon, located at the Gulf of Guinea in SW Cameroon, between latitudes 4°00' to 4°20'N, is an ideal object for this purpose. Its volcanic activity started 11 Ma ago and still continues today, providing lava flows of different ages and rather uniform basaltic composition. The climate of the area is humid-tropical, characterised by a distinct gradient in mean annual precipitation (MAP). MAP amounts to > 9000 mm on the SW flank, near the coast, decreasing to < 2000 mm on the opposite flank, in the rain shadow of Mt. Cameroon's peak. Eight soil profiles, including six on historical lava flows of different ages and two on older (Holocene) lava flows characterised by contrasting MAP, were described and analysed. Soil formation proceeds from Nudilithic Leptosol (on a 13 year-old lava flow) to Skeletic Mollic Leptic Vitric Silandic Andosol (54 years), Umbric Leptic Silandic Andosol (91 and 104 years), and finally to Umbric Silandic Andosol (Holocene, MAP 2400 mm) or Umbric Amphisilandic Endoaluandic Andosol (Holocene, MAP 8000 mm). The general trends of Fed/Fet and (Ca+Mg+K+Na)/Al molar ratios over time indicate progressive weathering, formation of pedogenic iron oxides, and leaching of Ca, Mg, K and Na. Irregular uppermost parts of the depth curves of these ratios in some soils suggest addition of fresh ash or dust. Organic matter (OM) contents are remarkably high in the 104 year-old soils that are located at 3000 m a.s.l., compared to all other analysed soils. A possible explanation is that biomass production and thus OM input are still high at this elevation, whereas the altitudinal temperature decline leads to decreased OM decomposition compared to the lower slope.

Formation and burial of pyrite and organic sulfur in mud sediments of the East China Sea inner shelf: Constraints from solid-phase sulfur speciation and stable sulfur isotope

NASA Astrophysics Data System (ADS)

Zhu, Mao-Xu; Shi, Xiao-Ning; Yang, Gui-Peng; Hao, Xiao-Chen

2013-02-01

Solid-phase sulfur speciation and stable sulfur isotopic compositions are used to elucidate the formation and burial of pyrite-sulfur (Spy) and organic sulfur (OS) at three selected sites in mud sediments of the East China Sea (ECS) inner shelf, and to infer potential factors influencing the preservation of Spy and OS in the sediments. Our results in combination with previous studies show that the overall reactivity of sedimentary organic matter (OM) is low, while OM at the site impacted by frequent algal-bloom events displays somewhat enhanced reactivity. We observed characteristically low contents of acid volatile sulfide (AVS) and Spy in the sediments, which can be attributed to low sulfate reduction rate due to high redox potential together with limited availability of labile OM. Several geochemical features, for example, persistent occurrence of S0, good coupling among the profiles of AVS, S0 and Spy, and large 34Spy depletion, all suggest that the polysulfide pathway and disproportionation are likely involved in the pyrite formation. Organic sulfur amounts in the sediments are at the lower end of OS contents reported in many other marine sediments around the world. The sources of OS are both biosynthetic and diagenetic, with the biosynthetic OS being the major share (59-73%). In one site studied (C702), enhanced accumulation of OS within the upper layers (14 cm) is believed to be associated with frequent algal-bloom events. Net burial fluxes of Spy and OS in the three sites studied range from 0.27 to 0.82 mmol/m2/d and from 0.22 to 0.74 mmol/m2/d, respectively. Sedimentation rate and algal-bloom events are two important factors influencing the spatial variability of Spy and OS burial fluxes in the whole shelf.

Fate and transport of the ß-adrenergic agonist ractopamine hydrochloride in soil-water systems

USDA-ARS?s Scientific Manuscript database

The feed additive ractopamine hydrochloride was fortified at four concentrations into batch vials containing soils that differed in both biological activity and organic matter (OM). Sampling of the liquid layer for 14 d demonstrated that ractopamine rapidly dissipated from the liquid layer. Less t...

The Importance of Allochthonous Subsidies to an Estuarine Food Web along a Salinity Gradient

EPA Science Inventory

Estuarine food webs function within a heterogeneous mosaic and are supported by a mix of primary producers from both local and distant sources. Processes governing the exchange and consumption of organic matter (OM), however, are poorly understood. To study the contribution of ...

Massive carbon addition to an organic-rich Andosol increased the subsoil but not the topsoil carbon stock

NASA Astrophysics Data System (ADS)

Zieger, Antonia; Kaiser, Klaus; Ríos Guayasamín, Pedro; Kaupenjohann, Martin

2018-05-01

Andosols are among the most carbon-rich soils, with an average of 254 Mg ha-1 organic carbon (OC) in the upper 100 cm. A current theory proposes an upper limit for OC stocks independent of increasing carbon input, because of finite binding capacities of the soil mineral phase. We tested the possible limits in OC stocks for Andosols with already large OC concentrations and stocks (212 g kg-1 in the first horizon, 301 Mg ha-1 in the upper 100 cm). The soils received large inputs of 1800 Mg OC ha-1 as sawdust within a time period of 20 years. Adjacent soils without sawdust application served as controls. We determined total OC stocks as well as the storage forms of organic matter (OM) of five horizons down to 100 cm depth. Storage forms considered were pyrogenic carbon, OM of < 1.6 g cm-3 density and with little to no interaction with the mineral phase, and strongly mineral-bonded OM forming particles of densities between 1.6 and 2.0 g cm-3 or > 2.0 g cm-3. The two fractions > 1.6 g cm-3 were also analysed for aluminium-organic matter complexes (Al-OM complexes) and imogolite-type phases using ammonium-oxalate-oxalic-acid extraction and X-ray diffraction (XRD). Pyrogenic organic carbon represented only up to 5 wt % of OC, and thus contributed little to soil OM. In the two topsoil horizons, the fraction between 1.6 and 2.0 g cm-3 had 65-86 wt % of bulk soil OC and was dominated by Al-OM complexes. In deeper horizons, the fraction > 2.0 g cm-3 contained 80-97 wt % of the bulk soil's total OC and was characterized by a mixture of Al-OM complexes and imogolite-type phases, with proportions of imogolite-type phases increasing with depth. In response to the sawdust application, only the OC stock at 25-50 cm depth increased significantly (α = 0.05, 1 - β = 0.8). The increase was entirely due to increased OC in the two fractions > 1.6 g cm-3. However, there was no significant increase in the total OC stocks within the upper 100 cm. The results suggest that long-term large OC inputs cannot be taken up by the obviously OC-saturated topsoil but induce downward migration and gradually increasing storage of OC in subsurface soil layers. The small additional OC accumulation despite the extremely large OC input over 20 years, however, shows that long time periods of high input are needed to promote the downward movement and deep soil storage of OC.

Influence of calcium carbonate and charcoal application on aggregation processes and organic matter retention at the silt-size scale

NASA Astrophysics Data System (ADS)

Asefaw Berhe, Asmeret; Kaiser, Michael; Ghezzehei, Teamrat; Myrold, David; Kleber, Markus

2013-04-01

The effectiveness of charcoal and calcium carbonate applications to improve soil conditions has been well documented. However, their influence on the formation of silt-sized aggregates and the amount and protection of associated organic matter (OM) against microbial decomposition is still largely unknown. For sustainable management of agricultural soils, silt-sized aggregates (2-53 µm) are of particularly large importance because they store up to 60% of soil organic carbon with mean residence times between 70 and 400 years. The objectives are i) to analyze the ability of CaCO3 and/or charcoal application to increase the amount of silt-sized aggregates and associated OM, ii) vary soil mineral conditions to establish relevant boundary conditions for amendment-induced aggregation processes, iii) to determine how amendment-induced changes in formation of silt-sized aggregates relate to microbial decomposition of OM. We set up artificial high reactive (HR, clay: 40%, sand: 57%, OM: 3%) and low reactive soils (LR, clay: 10%, sand: 89%, OM: 1%) and mixed them with charcoal (CC, 1%) and/or calcium carbonate (Ca, 0.2%). The samples were adjusted to a water potential of 0.3 bar and sub samples were incubated with microbial inoculum (MO). After a 16-weeks aggregation experiment, size fractions were separated by wet-sieving and sedimentation. Since we did not use mineral compounds in the artificial mixtures within the size range of 2 to 53 µm, we consider material recovered in this fraction as silt-sized aggregates, which was confirmed by SEM analyses. For the LR mixtures, we detected increasing N concentrations within the 2-53 µm fractions of the charcoal amended samples (CC, CC+Ca, and CC+Ca+MO) as compared to the Control sample with the strongest effect for the CC+Ca+MO sample. This indicates an association of N-containing microbial derived OM with silt-sized aggregates. For the charcoal amended LR and HR mixtures, the C concentrations of the 2-53 µm fractions are larger than those of the respective fractions of the Control samples but the effect is several times stronger for the LR mixtures. The C concentrations of the 2-53 µm fractions relative to the total C amount of the LR and HR mixtures are between 30 and 50%. The charcoal amended samples show generally larger relative C amounts associated with the 2-53 µm fractions than the Control samples. Benefits for aggregate formation and OM storage were larger for sand (LR) than for clay soil (HR). The gained data are similar to respective data for natural soils. Consequently, the suggested microcosm experiments are suitable to analyze mechanisms within soil aggregation processes.

Sedimentary hydrocarbons and sterols in a South Atlantic estuarine/shallow continental shelf transitional environment under oil terminal and grain port influences.

PubMed

Bet, Rafael; Bícego, Marcia C; Martins, César C

2015-06-15

Sterols and hydrocarbons were determined in the surface sediments from the transitional environment between Paranaguá Bay and the shallow continental shelf in the South Atlantic to assess the sources of organic matter (OM) and the contamination status of an area exposed to multiple anthropogenic inputs. Total aliphatic hydrocarbon concentrations were less than 10μgg(-1), which is typical of unpolluted sediments, and related to recent inputs from higher terrestrial plants. Total polycyclic aromatic hydrocarbon ranged from

Visible and near infrared spectroscopy coupled to random forest to quantify some soil quality parameters

NASA Astrophysics Data System (ADS)

de Santana, Felipe Bachion; de Souza, André Marcelo; Poppi, Ronei Jesus

2018-02-01

This study evaluates the use of visible and near infrared spectroscopy (Vis-NIRS) combined with multivariate regression based on random forest to quantify some quality soil parameters. The parameters analyzed were soil cation exchange capacity (CEC), sum of exchange bases (SB), organic matter (OM), clay and sand present in the soils of several regions of Brazil. Current methods for evaluating these parameters are laborious, timely and require various wet analytical methods that are not adequate for use in precision agriculture, where faster and automatic responses are required. The random forest regression models were statistically better than PLS regression models for CEC, OM, clay and sand, demonstrating resistance to overfitting, attenuating the effect of outlier samples and indicating the most important variables for the model. The methodology demonstrates the potential of the Vis-NIR as an alternative for determination of CEC, SB, OM, sand and clay, making possible to develop a fast and automatic analytical procedure.

Effect of actinobacteria agent inoculation methods on cellulose degradation during composting based on redundancy analysis.

PubMed

Zhao, Yue; Lu, Qian; Wei, Yuquan; Cui, Hongyang; Zhang, Xu; Wang, Xueqin; Shan, Si; Wei, Zimin

2016-11-01

In this study, actinobacteria agent including Streptomyces sp. and Micromonospora sp. were inoculated during chicken manure composting by different inoculation methods. The effect of different treatments on cellulose degradation and the relationship between inoculants and indigenous actinobacteria were investigated during composting. The results showed that inoculation in different stages of composting all improved the actinobacteria community diversity particularly in the cooling stage of composting (M3). Moreover, inoculation could distinctly accelerate the degradation of organic matters (OM) especially celluloses. Redundancy analysis indicated that the correlation between indigenous actinobacteria and degradation of OM and cellulose were regulated by inoculants and there were significant differences between different inoculation methods. Furthermore, synergy between indigenous actinobacteria and inoculants for degradation of OM and cellulose in M3 was better than other treatments. Conclusively, we suggested an inoculation method to regulate the indigenous actinobacteria based on the relationship between inoculants and indigenous actinobacteria and degradation content. Copyright © 2016 Elsevier Ltd. All rights reserved.

Respiration and enzymatic activities as indicators of stabilization of sewage sludge composting.

PubMed

Nikaeen, Mahnaz; Nafez, Amir Hossein; Bina, Bijan; Nabavi, BiBi Fatemeh; Hassanzadeh, Akbar

2015-05-01

The objective of this work was to study the evolution of physico-chemical and microbial parameters in the composting process of sewage sludge (SS) with pruning wastes (PW) in order to compare these parameters with respect to their applicability in the evaluation of organic matter (OM) stabilization. To evaluate the composting process and organic matter stability, different microbial activities were compared during composting of anaerobically digested SS with two volumetric ratios, 1:1 and 3:1 of PW:SS and two aeration techniques including aerated static piles (ASP) and turned windrows (TW). Dehydrogenase activity, fluorescein diacetate hydrolysis, and specific oxygen uptake rate (SOUR) were used as microbial activity indices. These indices were compared with traditional parameters, including temperature, pH, moisture content, organic matter, and C/N ratio. The results showed that the TW method and 3:1 (PW:SS) proportion was superior to the ASP method and 1:1 proportion, since the former accelerate the composting process by catalyzing the OM stabilization. Enzymatic activities and SOUR, which reflect microbial activity, correlated well with temperature fluctuations. Based on these results it appears that SOUR and the enzymatic activities are useful parameters to monitor the stabilization of SS compost. Copyright © 2015 Elsevier Ltd. All rights reserved.

Protein quality of insects as potential ingredients for dog and cat foods.

PubMed

Bosch, Guido; Zhang, Sheng; Oonincx, Dennis G A B; Hendriks, Wouter H

2014-01-01

Insects have been proposed as a high-quality, efficient and sustainable dietary protein source. The present study evaluated the protein quality of a selection of insect species. Insect substrates were housefly pupae, adult house cricket, yellow mealworm larvae, lesser mealworm larvae, Morio worm larvae, black soldier fly larvae and pupae, six spot roach, death's head cockroach and Argentinean cockroach. Reference substrates were poultry meat meal, fish meal and soyabean meal. Substrates were analysed for DM, N, crude fat, ash and amino acid (AA) contents and for in vitro digestibility of organic matter (OM) and N. The nutrient composition, AA scores as well as in vitro OM and N digestibility varied considerably between insect substrates. For the AA score, the first limiting AA for most substrates was the combined requirement for Met and Cys. The pupae of the housefly and black soldier fly were high in protein and had high AA scores but were less digestible than other insect substrates. The protein content and AA score of house crickets were high and similar to that of fish meal; however, in vitro N digestibility was higher. The cockroaches were relatively high in protein but the indispensable AA contents, AA scores and the in vitro digestibility values were relatively low. In addition to the indices of protein quality, other aspects such as efficiency of conversion of organic side streams, feasibility of mass-production, product safety and pet owner perception are important for future dog and cat food application of insects as alternative protein source.

Geochemical Aspects of Formation of Large Oil Deposits in the Volga-Ural Sedimentary Basin

NASA Astrophysics Data System (ADS)

Plotnikova, I.; Nosova, F.; Pronin, N.; Nosova, J.; Budkevich, T.

2012-04-01

The study of the rocks domanikoid type in the territory of the Ural-Volga region has an almost century-long history, beginning with the first studies of A.D. Archangelsky in the late 20's of last century. But nevertheless the question of the source of oil that formed the industrial deposits of Volga-Ural oil and gas province (OGP), where Romashkinskoye oil field occupies a special place, remains unresolved and topical. According to the sedimentary-migration theory of origin of oil and gas, it is supposed that the primary source of hydrocarbons in this area are the deposits of domanikoid type that contain a large ammount of sapropel organic matter (OM). Semiluki (domanik) horizon of srednefranski substage of the Upper Devonian is considered to be a typical domanikoid stratum. Investigation of the OM of the rocks and oils of the sedimentary cover on the basis of chromato-mass spectrometry method allows us to study the correlations between rock and oil and to assess the location (or absence) of the sources of hydrocarbons in the Paleozoic sedimentary cover. The results of geochemical study of dispersed organic matter (DOM) of rocks from Semiluksky horizon of the Upper Devonian and of the oil from Pashiysky horizon of the Middle Devonian form the basis of this paper. The objectives of this study were the following: to determine the original organic matter of the rocks, which would indicate the conditions of sedimentation of the supposed rock-oil sources; the study of chemofossils (biomarkers) in oil from Pashiyskiy horizon; and the identification of genetic association of DOM rocks from Semiluksky horizon with this oil on the basis of the oil-DOM correlation. The study of biomarkers was carried out with the help of chromato-mass spectrometry in the Laboratory of Geochemistry of Fossil Fuels (Kazan Federal University). In this study we used several informative parameters characterizing the depositional environment, the type of source OM and its maturity: STER / PENT, hC35/hC34, GAM / HOP, S27/S28/S29 (steranes), DIA / REG, Ts / Tm, MOR / HOP, NOR / HOP, TET / TRI, C29SSR, C29BBAA, C31HSR, S30STER, TRI / PENT, TRI / HOP. Comparison in the rock-oil system was performed primarily according to the parameters indicating the depositional environment of the source rock that contains syngenetic DOM - according to the coefficients that determine lithological conditions for the formation of the supposed oil-source bed strata (DIA / REG, Ts / Tm, NOR / HOP, TRI / HOP and STER / PENT). Biomarker ratios indicate a different type of sedimentation basins. Sediments, which accumulated DOM from Semilukskiy horizon, can be characterized by low clay content, or its absence, that is consistent with the carbonate type of cut of the horizon. The bacterial material that was accumulated under reducing conditions of sedimentation appeared to be the source of syngenetic OM. Chemofossils found in oils from Pashiyskiy horizon are typical of sedimentary strata that contain clay - for clastic rocks, which in the study area are mainly represented by deposits and Eyfel Givetian layers of the Middle Devonian and lowfransk substage of the Upper Devonian. The study of correlations obtained for the different coefficients of OM and oils showed that only the relationships between Ts/Tm and DIA/REG and between NOR/HOP and TRI/HOP are characteristic of close, almost similar values of correlation both for the dispersed organic matter and for oil. In all other cases, the character of the correlation of OM is significantly different from that of oil. The differences in values and ranges of biomarker ratios as well as the character of their correlation indicates the absence of genetic connection between the oil from Pashiyskiy horizon for the dispersed organic matter from Semilukskiy horizon. This conclusion is based on the study of five biomarker parameters (DIA/REG, Ts/Tm, NOR/HOP, TRI/HOP and STER/PENT). The research results described in the article clearly indicate the need for further studies of geochemical features of the organic matter of the Paleozoic mantle rocks and the underlying sedimentary and crystalline complexes of Precambrian.

Effects of rotational and continuous grazing on herbage quality, feed intake and performance of sheep on a semi-arid grassland steppe.

PubMed

Hao, Jun; Dickhoefer, Uta; Lin, Lijun; Müller, Katrin; Glindemann, Thomas; Schönbach, Philipp; Schiborra, Anne; Wang, Chengjie; Susenbeth, Andreas

2013-02-01

Compared to continuous grazing (CG), rotational grazing (RG) increases herbage production and thereby the resilience of grasslands to intensive grazing. Results on feed intake and animal performance, however, are contradictory. Hence, the objective of the study was to determine the effects of RG and CG on herbage mass, digestibility of ingested organic matter (dOM), organic matter intake (OMI) and live weight gain (LWG) of sheep in the Inner Mongolian steppe, China. During June-September 2005-2008, two 2-ha plots were used for each grazing system. In RG, plots were divided into four 0.5-ha paddocks that were grazed for 10 days each at a moderate stocking rate. Instead, CG sheep grazed the whole plots throughout the entire grazing season. At the beginning of every month, dOM was estimated from faecal crude protein concentration. Faeces excretion was determined using titanium dioxide in six sheep per plot. The animals were weighed every month to determine their LWG. Across the years, herbage mass did not differ between systems (p = 0.820). However, dOM, OMI and LWG were lower in RG than in CG (p ≤ 0.005). Thus, our study showed that RG does not improve herbage growth, feed intake and performance of sheep and suggests that stocking rates rather than management system determine the ecological sustainability of pastoral livestock systems in semi-arid environments.

Multibiomarker responses in aquatic insect Belostoma elegans (Hemiptera) to organic pollution in freshwater system.

PubMed

Lavarías, S; Ocon, C; van Oosterom, V López; Laino, A; Medesani, D A; Fassiano, A; Garda, H; Donadelli, J; de Molina, M Ríos; Capítulo, A Rodrigues

2017-01-01

The present study analyzes a battery of biomarkers in the water bug Belostoma elegans from a stream polluted with organic matter (OMS), and another one considered as reference site (RS) during spring-summer season (December to March). Biochemical parameters of glucidic, lipidic and oxidative metabolic pathways were analyzed in males and females of this insect. In general, no significant differences were observed in all biomarkers assayed between both sexes, except lactate concentration which was higher in males than in females (p < 0.0006) in the first three months. About carbohydrate metabolism parameters, only pyruvate-kinase showed significant differences between insects collected in both streams (p < 0.05) during December. However, the total lipid content, saturated fatty acid, and mainly triacylglycerol were higher in insects from RS compared to those from OMS (p < 0.002) in all sampled months. Levels of lipoperoxidation, protein oxidation, reduced glutathione and glutathione-S-transferase activity showed no differences between insects collected from both streams. Nevertheless, the significant increase observed in superoxide dismutase and catalase activities (p < 0.004) could be due to the elevated oxidative metabolism in insects from RS compared to those from OMS with lower dissolved oxygen. Regarding those responding parameters, males accounted for the differences between the two sites during the study period. In conclusion, our results support that lipidic energetic reserves and antioxidant enzyme activities in B. elegans could be used as biomarkers of environmental pollution by organic matter.

Determine ISS Soyuz Orbital Module Ballistic Limits for Steel Projectiles Hypervelocity Impact Testing

NASA Technical Reports Server (NTRS)

Lyons, Frankel

2013-01-01

A new orbital debris environment model (ORDEM 3.0) defines the density distribution of the debris environment in terms of the fraction of debris that are low-density (plastic), medium-density (aluminum) or high-density (steel) particles. This hypervelocity impact (HVI) program focused on assessing ballistic limits (BLs) for steel projectiles impacting the enhanced Soyuz Orbital Module (OM) micrometeoroid and orbital debris (MMOD) shield configuration. The ballistic limit was defined as the projectile size on the threshold of failure of the OM pressure shell as a function of impact speeds and angle. The enhanced OM shield configuration was first introduced with Soyuz 30S (launched in May 2012) to improve the MMOD protection of Soyuz vehicles docked to the International Space Station (ISS). This test program provides HVI data on U.S. materials similar in composition and density to the Russian materials for the enhanced Soyuz OM shield configuration of the vehicle. Data from this test program was used to update ballistic limit equations used in Soyuz OM penetration risk assessments. The objective of this hypervelocity impact test program was to determine the ballistic limit particle size for 440C stainless steel spherical projectiles on the Soyuz OM shielding at several impact conditions (velocity and angle combinations). This test report was prepared by NASA-JSC/ HVIT, upon completion of tests.

Effects of organic amendments on the toxicity and bioavailability of cadmium and copper in spiked formulated sediments

USGS Publications Warehouse

Besser, J.M.; Brumbaugh, W.G.; May, T.W.; Ingersoll, C.G.

2003-01-01

We evaluated the partitioning and toxicity of cadmium (Cd) and copper (Cu) spiked into formulated sediments containing two types of organic matter (OM), i.e., cellulose and humus. Amendments of cellulose up to 12.5% total organic carbon (TOC) did not affect partitioning of Cd or Cu between sediment and pore water and did not significantly affect the toxicity of spiked sediments in acute toxicity tests with the amphipod Hyalella azteca. In contrast, amendments of natural humus shifted the partitioning of both Cd and Cu toward greater concentrations in sediment and lesser concentrations in pore water and significantly reduced toxic effects of both metals. Thresholds for toxicity, based on measured metal concentrations in whole sediment, were greater for both Cd and Cu in sediments amended with a low level of humus (2.9% TOC) than in sediments without added OM. Amendments with a high level of humus (8.9% TOC) eliminated toxicity at the highest spike concentrations of both metals (sediment concentrations of 12.4 ??g Cd/g and 493 ??g Cu/g). Concentrations of Cd in pore water associated with acute toxicity were similar between sediments with and without humus amendments, suggesting that toxicity of Cd was reduced primarily by sorption to sediment OM. However, toxic effects of Cu in humus treatments were associated with greater pore-water concentrations than in controls, suggesting that toxicity of Cu was reduced both by sorption and by complexation with soluble ligands. Both sorption and complexation by OM tend to make proposed sediment quality guidelines (SQGs) based on total metal concentrations more protective for high-OM sediments. Our results suggest that the predictive ability of SQGs could be improved by models of metal interactions with natural OM in sediment and pore water.

Effects of organic amendments on the toxicity and bioavailability of cadmium and copper in spiked formulated sediments.

PubMed

Besser, John M; Brumbaugh, William G; May, Thomas W; Ingersoll, Christopher G

2003-04-01

We evaluated the partitioning and toxicity of cadmium (Cd) and copper (Cu) spiked into formulated sediments containing two types of organic matter (OM), i.e., cellulose and humus. Amendments of cellulose up to 12.5% total organic carbon (TOC) did not affect partitioning of Cd or Cu between sediment and pore water and did not significantly affect the toxicity of spiked sediments in acute toxicity tests with the amphipod Hyalella azteca. In contrast, amendments of natural humus shifted the partitioning of hoth Cd and Cu toward greater concentrations in sediment and lesser concentrations in pore water and significantly reduced toxic effects of both metals. Thresholds for toxicity, based on measured metal concentrations in whole sediment, were greater for both Cd and Cu in sediments amended with a low level of humus (2.9% TOC) than in sediments without added OM. Amendments with a high level of humus (8.9% TOC) eliminated toxicity at the highest spike concentrations of both metals (sediment concentrations of 12.4 microg Cd/g and 493 microg Cu/g). Concentrations of Cd in pore water associated with acute toxicity were similar between sediments with and without humus amendments, suggesting that toxicity of Cd was reduced primarily by sorption to sediment OM. However, toxic effects of Cu in humus treatments were associated with greater pore-water concentrations than in controls, suggesting that toxicity of Cu was reduced both by sorption and by complexation with soluble ligands. Both sorption and complexation by OM tend to make proposed sediment quality guidelines (SQGs) based on total metal concentrations more protective for high-OM sediments. Our results suggest that the predictive ability of SQGs could be improved by models of metal interactions with natural OM in sediment and pore water.

Trends of particulate matter (PM2.5) and chemical composition at a regional background site in the Western Mediterranean over the last nine years (2002-2010)

NASA Astrophysics Data System (ADS)

Cusack, M.; Alastuey, A.; Pérez, N.; Pey, J.; Querol, X.

2012-09-01

The time variability and long term trends of PM2.5 (particulate matter of diameter < 2.5 μm) at various regional background (RB) sites across Europe are studied and interpreted in this work. Data on mean annual levels of PM2.5 measured at Montseny (MSY, North East Spain) and various RB sites in Spain and Europe are evaluated and compared, and subsequently analysed for statistically significant trends. The MSY site registered higher average PM2.5 levels than those measured at a selection of other RB sites across Spain, Portugal, Germany and Scandinavia by percentage compared to the mean of all the stations in these countries, but lower than those measured in Switzerland, Italy and Austria. Reductions in PM2.5 were observed across all stations in Spain and Europe to varying degrees (7-49%). MSY underwent a statistically significant reduction since measurements began, indicating a year-on-year gradual decrease (-3.7 μg m-3, calculated from the final year of data compared to the mean). Similar trends were observed in other RB sites across Spain (-1.9 μg m-3). Reductions recorded in PM2.5 across Europe were varied, with many experiencing gradual, year-on-year decreases (-1.8 μg m-3). These reductions have been attributed to various causes: the introduction and implementation of pollution abatement strategies in EU member states, the effect of the current economic crisis on emissions of PM2.5 and the influence of meteorology observed during the winters of 2009 and 2010. In addition, the North Atlantic Oscillation (NAO), a large scale meteorological phenomenon most prevalent during winter, was observed to influence the frequency of Saharan dust intrusions across the Iberian Peninsula. Chemical composition of PM2.5 at MSY is characterised by high levels of organic matter (OM) and sulphate, followed by crustal material, nitrate and ammonia. Sea Spray and elemental carbon (EC) comprised a minor part of the total PM2.5 mass. Statistical trend analysis was performed on the various chemical components of PM2.5 recorded at MSY to determine which components were accountable for the decrease in PM2.5 concentration. It is shown that OM underwent the largest decrease over the time period with a statistically significant trend (-1.3 μg m-3 compared to the mean), followed by sulphate (-0.8 μg m-3), ammonium (-0.5 μg m-3) and nitrate (-0.4 μg m-3). Conversely, sea spray, EC and crustal material reductions were found to be negligible.

Trends of particulate matter (PM2.5) and chemical composition at a regional background site in the Western Mediterranean over the last nine years (2002-2010)

NASA Astrophysics Data System (ADS)

Cusack, M.; Alastuey, A.; Pérez, N.; Pey, J.; Querol, X.

2012-04-01

The time variability and long term trends of PM2.5 (particulate matter of diameter <2.5 μm) at various regional background (RB) sites across Europe are studied and interpreted in this work. Long-term trends of PM2.5 concentrations are relatively scarce across Europe, with few studies outlining the changes measured in PM2.5 concentrations over a significant period of time. To this end, data on mean annual levels of PM2.5 measured at Montseny (MSY, North East Spain) and various RB sites in Spain and Europe are evaluated and compared, and subsequently analysed for statistically significant trends. The MSY site registered higher average PM2.5 levels than those measured at a selection of other RB sites across Spain, Portugal, Germany and Scandinavia, but lower than those measured in Switzerland, Italy and Austria. Reductions in PM2.5 were observed across all stations in Spain and Europe to varying degrees. MSY underwent a statistically significant reduction since measurements began, indicating a year-on-year gradual decrease (-3.7 μg m-3, calculated from the final year of data compared to the mean). Similar trends were observed in other RB sites across Spain (-1.9 μg m-3). Reductions recorded in PM2.5 across Europe were varied, with many experiencing gradual, year-on-year decreases (-1.8 μg m-3). These reductions have been attributed to various causes: the introduction and implementation of pollution abatement strategies in EU member states, the effect of the current economic crisis on emissions of PM2.5 and the influence of anomalous meteorology observed during the winters of 2009 and 2010. The North Atlantic Oscillation (NAO), a large scale meteorological phenomenon most prevalent during winter, was observed to influence the frequency of Saharan dust intrusions across the Iberian Peninsula. Chemical composition of PM2.5 at MSY is characterised by high levels of organic matter (OM) and sulphate, followed by crustal material, nitrate and ammonia. Sea Spray and finally elemental carbon (EC) comprised a minor part of the total PM2.5 mass. Statistical trend analysis was performed on the various chemical components of PM2.5 recorded at MSY to determine which components were accountable for the decrease in PM2.5 concentration. It is shown that OM underwent the largest decrease over the time period with a statistically significant trend (-1.3 μg m-3 of the mean), followed by sulphate (-0.8 μg m-3), ammonium (-0.5 μg m-3) and nitrate (-0.4 μg m-3). Conversely, sea spray, EC and crustal material reductions were found to be negligible.

The experimental flow to the Colorado River delta: Effects on carbon mobilization in a dry watercourse

NASA Astrophysics Data System (ADS)

Bianchi, Thomas S.; Butman, David; Raymond, Peter A.; Ward, Nicholas D.; Kates, Rory J. S.; Flessa, Karl W.; Zamora, Hector; Arellano, Ana R.; Ramirez, Jorge; Rodriguez, Eliana

2017-03-01

Here we report on the effects of an experimental flood on the carbon cycling dynamics in the dry watercourse of the Colorado River in Mexico. We observed post-flood differences in the degree of decay, age, and concentration of dissolved organic carbon (DOC), as well as dissolved CH4 and CO2 concentrations throughout the study site. Our results indicate that this flooded waterway was a limited source of CH4 and CO2 to the atmosphere during the event and that DOC age increased with time of flooding. Based on our findings, we suggest that the interplay between storage and mobilization of carbon and greenhouse gases in arid and semiarid regions is potentially sensitive to changing climate conditions, particularly hydrologic variability. Changes in the radiocarbon age of DOC throughout the flooding event suggest that organic matter (OM) that had been stored for long periods (e.g., millennial) was mobilized by the flooding event along with CO2. The OM residing in the dry riverbed that was mobilized into floodwaters had a signature reflective of degraded vascular plant OM and microbial biomass. Whether this microbial OM was living or dead, our findings support previous work in soils and natural waters showing that microbial OM can remain stable and stored in ecosystems for long time periods. As human appropriation of water resources continues to increase, the episodic drying and rewetting of once natural riverbeds and deltas may fundamentally alter the processing and storage of carbon in such systems.

The role of a combined coagulation and disk filtration process as a pre-treatment to microfiltration and reverse osmosis membranes in a municipal wastewater pilot plant.

PubMed

Chon, Kangmin; Cho, Jaeweon; Kim, Seung Joon; Jang, Am

2014-12-01

A pilot study was conducted to assess the performance of a municipal wastewater reclamation plant consisting of a combined coagulation-disk filtration (CC-DF) process, microfiltration (MF) and reverse osmosis (RO) membranes, in terms of the removal of water contaminants and changes in characteristics of effluent organic matter (EfOM). The CC-DF and MF membranes were not effective for the removal of dissolved water contaminants. However, they could partially reduce the turbidity associated with the cake layer formation by particulate materials on the membrane surfaces. Furthermore, most of water contaminants were completely removed by the RO membranes. Although the CC-DF process could remove approximately 20% of turbidity, the aluminium concentrations considerably increased after the CC-DF process due to the residual coagulants complexed with both carboxylic acid and alcohol functional groups of EfOM. Those aluminium-EfOM complexes had a lower negative charge and higher molecular weight (>0.1 μm pore size of the MF membranes) compared to non-complexed EfOM. These results indicate that the control of the formation of the aluminium-EfOM complexes should be considered as a key step to use the CC-DF process as a pre-treatment of the MF and RO membranes for mitigation of membrane fouling in the tested pilot plant. Copyright © 2014 Elsevier Ltd. All rights reserved.

Quantifying immediate radiative forcing by black carbon and organic matter with the Specific Forcing Pulse

NASA Astrophysics Data System (ADS)

Bond, T. C.; Zarzycki, C.; Flanner, M. G.; Koch, D. M.

2010-06-01

We propose a measure to quantify climate warming or cooling by pollutants with atmospheric lifetimes of less than one year: the Specific Forcing Pulse (SFP). SFP is the amount of energy added to the Earth system per mass of pollutant emitted. Global average SFP for black carbon, including atmosphere and cryosphere, is 1.12 GJ g-1 and that for organic matter is -0.061 GJ g-1. We provide regional values for black carbon (BC) and organic matter (OM) emitted from 23 source-region combinations, divided between atmosphere and cryosphere impacts and identifying forcing by latitude. Regional SFP varies by about 40% for black carbon. This variation is relatively small because of compensating effects; particles from regions that affect ice albedo typically have shorter atmospheric lifetimes because of lower convection. The ratio between BC and OM SFP implies that, for direct forcing, an OM:BC mass ratio of 15 has a neutral effect on top-of-atmosphere direct forcing for any region, and any lower ratio induces direct warming. However, important processes, particularly cloud changes that tend toward cooling, have not been included here. We demonstrate ensemble adjustment, in which we produce a "best estimate" by combining a suite of diverse but simple models and enhanced models of greater complexity. Adjustments for black carbon internal mixing and for regional variability are discussed; regions with convection are implicated in greater model diversity. SFP expresses scientific uncertainty and separates it from policy uncertainty; the latter is caused by disagreements about the relevant time horizon, impact, or spatial scale of interest. However, metrics used in policy discussions, such as global warming potentials, are easily derived from SFP. Global-average SFP for biofuel and fossil fuel emissions translates to a 100-year GWP of about 760 for black carbon and -40 for organic matter when snow forcing is included. Ensemble-adjusted estimates of atmospheric radiative impact by black and organic matter using year 2000 emissions are +0.46 W m-2 and -0.17 W m-2, respectively; anthropogenic forcing is +0.38 W m-2 and -0.12 W m-2. The black carbon value is only 11% higher than that of the Intergovernmental Panel on Climate Change (IPCC), although this value includes enhanced absorption due to internal mixing.

Temperature response of permafrost soil carbon is attenuated by mineral protection.

PubMed

Gentsch, Norman; Wild, Birgit; Mikutta, Robert; Čapek, Petr; Diáková, Katka; Schrumpf, Marion; Turner, Stephanie; Minnich, Cynthia; Schaarschmidt, Frank; Shibistova, Olga; Schnecker, Jörg; Urich, Tim; Gittel, Antje; Šantrůčková, Hana; Bárta, Jiři; Lashchinskiy, Nikolay; Fuß, Roland; Richter, Andreas; Guggenberger, Georg

2018-05-18

Climate change in Arctic ecosystems fosters permafrost thaw and makes massive amounts of ancient soil organic carbon (OC) available to microbial breakdown. However, fractions of the organic matter (OM) may be protected from rapid decomposition by their association with minerals. Little is known about the effects of mineral-organic associations (MOA) on the microbial accessibility of OM in permafrost soils and it is not clear which factors control its temperature sensitivity. In order to investigate if and how permafrost soil OC turnover is affected by mineral controls, the heavy fraction (HF) representing mostly MOA was obtained by density fractionation from 27 permafrost soil profiles of the Siberian Arctic. In parallel laboratory incubations, the unfractionated soils (bulk) and their HF were comparatively incubated for 175 days at 5 and 15°C. The HF was equivalent to 70 ± 9% of the bulk CO 2 respiration as compared to a share of 63 ± 1% of bulk OC that was stored in the HF. Significant reduction of OC mineralization was found in all treatments with increasing OC content of the HF (HF-OC), clay-size minerals and Fe or Al oxyhydroxides. Temperature sensitivity (Q10) decreased with increasing soil depth from 2.4 to 1.4 in the bulk soil and from 2.9 to 1.5 in the HF. A concurrent increase in the metal-to-HF-OC ratios with soil depth suggests a stronger bonding of OM to minerals in the subsoil. There, the younger 14 C signature in CO 2 than that of the OC indicates a preferential decomposition of the more recent OM and the existence of a MOA fraction with limited access of OM to decomposers. These results indicate strong mineral controls on the decomposability of OM after permafrost thaw and on its temperature sensitivity. Thus, we here provide evidence that OM temperature sensitivity can be attenuated by MOA in permafrost soils. © 2018 John Wiley & Sons Ltd.