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Sample records for md trajectory analysis

  1. Direct NOE simulation from long MD trajectories.

    PubMed

    Chalmers, G; Glushka, J N; Foley, B L; Woods, R J; Prestegard, J H

    2016-04-01

    A software package, MD2NOE, is presented which calculates Nuclear Overhauser Effect (NOE) build-up curves directly from molecular dynamics (MD) trajectories. It differs from traditional approaches in that it calculates correlation functions directly from the trajectory instead of extracting inverse sixth power distance terms as an intermediate step in calculating NOEs. This is particularly important for molecules that sample conformational states on a timescale similar to molecular reorientation. The package is tested on sucrose and results are shown to differ in small but significant ways from those calculated using an inverse sixth power assumption. Results are also compared to experiment and found to be in reasonable agreement despite an expected underestimation of water viscosity by the water model selected. PMID:26826977

  2. Direct NOE simulation from long MD trajectories

    NASA Astrophysics Data System (ADS)

    Chalmers, G.; Glushka, J. N.; Foley, B. L.; Woods, R. J.; Prestegard, J. H.

    2016-04-01

    A software package, MD2NOE, is presented which calculates Nuclear Overhauser Effect (NOE) build-up curves directly from molecular dynamics (MD) trajectories. It differs from traditional approaches in that it calculates correlation functions directly from the trajectory instead of extracting inverse sixth power distance terms as an intermediate step in calculating NOEs. This is particularly important for molecules that sample conformational states on a timescale similar to molecular reorientation. The package is tested on sucrose and results are shown to differ in small but significant ways from those calculated using an inverse sixth power assumption. Results are also compared to experiment and found to be in reasonable agreement despite an expected underestimation of water viscosity by the water model selected.

  3. Prediction of nitroxide spin label EPR spectra from MD trajectories: application to myoglobin.

    PubMed

    Kuprusevicius, Egidijus; White, Gaye; Oganesyan, Vasily S

    2011-01-01

    We report the prediction of motional EPR spectra of the metalloprotein sperm whale myoglobin spin labelled with nitroxide directly from Molecular Dynamics (MD) simulations at the atomistic scale. We show that an accurate simulation of EPR spectra can be achieved from a single MD trajectory which is in excellent agreement with experiment. Simulations have been carried out using a general method reported previously by us for the simulation of EPR spectra form single dynamical trajectories. Our calculations demonstrate the complex nature of the dynamics of a spin label which is a superposition of the fast librational motions around dihedral states, of slow conformational flips among different rotameric states and of the slow rotational diffusion of the protein itself. The MD-EPR methodology reported does not require any additional stochastic modelling using adjustable parameters and opens, for the first time, the prospect of the simulation of EPR spectra entirely from single MD trajectories. Such a technique not only simplifies the interpretation and analysis of EPR spectra but also opens the possibility, for example, of "computer engineering" of spin-labelled proteins with the desired properties prior to actual EPR experiment. PMID:21322490

  4. TrackTable Trajectory Analysis

    SciTech Connect

    Wilson, Andrew T.

    2014-08-25

    Tracktable is designed for analysis and rendering of the trajectories of moving objects such as planes, trains, automobiles and ships. Its purpose is to operate on large sets of trajectories (millions) to help a user detect, analyze and display patterns. It will also be used to disseminate trajectory research results from Sandia's PANTHER Grand Challenge LDRD.

  5. PANTHER. Trajectory Analysis

    SciTech Connect

    Rintoul, Mark Daniel; Wilson, Andrew T.; Valicka, Christopher G.; Kegelmeyer, W. Philip; Shead, Timothy M.; Newton, Benjamin D.; Czuchlewski, Kristina Rodriguez

    2015-09-01

    We want to organize a body of trajectories in order to identify, search for, classify and predict behavior among objects such as aircraft and ships. Existing compari- son functions such as the Fr'echet distance are computationally expensive and yield counterintuitive results in some cases. We propose an approach using feature vectors whose components represent succinctly the salient information in trajectories. These features incorporate basic information such as total distance traveled and distance be- tween start/stop points as well as geometric features related to the properties of the convex hull, trajectory curvature and general distance geometry. Additionally, these features can generally be mapped easily to behaviors of interest to humans that are searching large databases. Most of these geometric features are invariant under rigid transformation. We demonstrate the use of different subsets of these features to iden- tify trajectories similar to an exemplar, cluster a database of several hundred thousand trajectories, predict destination and apply unsupervised machine learning algorithms.

  6. 14 CFR 417.207 - Trajectory analysis.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 14 Aeronautics and Space 4 2013-01-01 2013-01-01 false Trajectory analysis. 417.207 Section 417... OF TRANSPORTATION LICENSING LAUNCH SAFETY Flight Safety Analysis § 417.207 Trajectory analysis. (a) General. A flight safety analysis must include a trajectory analysis that establishes: (1) For any...

  7. 14 CFR 417.207 - Trajectory analysis.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 14 Aeronautics and Space 4 2014-01-01 2014-01-01 false Trajectory analysis. 417.207 Section 417... OF TRANSPORTATION LICENSING LAUNCH SAFETY Flight Safety Analysis § 417.207 Trajectory analysis. (a) General. A flight safety analysis must include a trajectory analysis that establishes: (1) For any...

  8. Trajectory Analysis and Optimization System

    1996-06-04

    TAOS is a general-purpose software tool capable of analyzing nearly any type of three degree-of-freedom point-mass, high-speed trajectory. Input files contain aerodynamic coefficients, propulsion data, and a trajectory description. The trajectory description divides the trajectory into segments, and within each segment, guidance rules provided by the user describe how the trajectory is computed. Output files contain tabulated trajectory information such as position, velocity, and acceleration. Parametric optimization provides a powerful method for satisfying mission-planning constraints,more » and trajectories involving more than one vehicle can be computed within a single problem.« less

  9. MDTraj: A Modern Open Library for the Analysis of Molecular Dynamics Trajectories

    PubMed Central

    McGibbon, Robert T.; Beauchamp, Kyle A.; Harrigan, Matthew P.; Klein, Christoph; Swails, Jason M.; Hernández, Carlos X.; Schwantes, Christian R.; Wang, Lee-Ping; Lane, Thomas J.; Pande, Vijay S.

    2015-01-01

    As molecular dynamics (MD) simulations continue to evolve into powerful computational tools for studying complex biomolecular systems, the necessity of flexible and easy-to-use software tools for the analysis of these simulations is growing. We have developed MDTraj, a modern, lightweight, and fast software package for analyzing MD simulations. MDTraj reads and writes trajectory data in a wide variety of commonly used formats. It provides a large number of trajectory analysis capabilities including minimal root-mean-square-deviation calculations, secondary structure assignment, and the extraction of common order parameters. The package has a strong focus on interoperability with the wider scientific Python ecosystem, bridging the gap between MD data and the rapidly growing collection of industry-standard statistical analysis and visualization tools in Python. MDTraj is a powerful and user-friendly software package that simplifies the analysis of MD data and connects these datasets with the modern interactive data science software ecosystem in Python. PMID:26488642

  10. GROMOS++ Software for the Analysis of Biomolecular Simulation Trajectories.

    PubMed

    Eichenberger, Andreas P; Allison, Jane R; Dolenc, Jožica; Geerke, Daan P; Horta, Bruno A C; Meier, Katharina; Oostenbrink, Chris; Schmid, Nathan; Steiner, Denise; Wang, Dongqi; van Gunsteren, Wilfred F

    2011-10-11

    GROMOS++ is a set of C++ programs for pre- and postprocessing of molecular dynamics simulation trajectories and as such is part of the GROningen MOlecular Simulation software for (bio)molecular simulation. It contains more than 70 programs that can be used to prepare data for the production of molecular simulation trajectories and to analyze these. These programs are reviewed and the various structural, dynamic, and thermodynamic quantities that can be analyzed using time series, correlation functions, and distributions are described together with technical aspects of their implementation in GROMOS. A few examples of the use of GROMOS++ for the analysis of MD trajectories are given. A full list of all GROMOS++ programs, together with an indication of their capabilities, is given in the Appendix . PMID:26598168

  11. ST-analyzer: a web-based user interface for simulation trajectory analysis.

    PubMed

    Jeong, Jong Cheol; Jo, Sunhwan; Wu, Emilia L; Qi, Yifei; Monje-Galvan, Viviana; Yeom, Min Sun; Gorenstein, Lev; Chen, Feng; Klauda, Jeffery B; Im, Wonpil

    2014-05-01

    Molecular dynamics (MD) simulation has become one of the key tools to obtain deeper insights into biological systems using various levels of descriptions such as all-atom, united-atom, and coarse-grained models. Recent advances in computing resources and MD programs have significantly accelerated the simulation time and thus increased the amount of trajectory data. Although many laboratories routinely perform MD simulations, analyzing MD trajectories is still time consuming and often a difficult task. ST-analyzer, http://im.bioinformatics.ku.edu/st-analyzer, is a standalone graphical user interface (GUI) toolset to perform various trajectory analyses. ST-analyzer has several outstanding features compared to other existing analysis tools: (i) handling various formats of trajectory files from MD programs, such as CHARMM, NAMD, GROMACS, and Amber, (ii) intuitive web-based GUI environment--minimizing administrative load and reducing burdens on the user from adapting new software environments, (iii) platform independent design--working with any existing operating system, (iv) easy integration into job queuing systems--providing options of batch processing either on the cluster or in an interactive mode, and (v) providing independence between foreground GUI and background modules--making it easier to add personal modules or to recycle/integrate pre-existing scripts utilizing other analysis tools. The current ST-analyzer contains nine main analysis modules that together contain 18 options, including density profile, lipid deuterium order parameters, surface area per lipid, and membrane hydrophobic thickness. This article introduces ST-analyzer with its design, implementation, and features, and also illustrates practical analysis of lipid bilayer simulations.

  12. 14 CFR 417.207 - Trajectory analysis.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... the requirements of paragraph (a) of this section. (c) Wind effects. A trajectory analysis must account for all wind effects, including profiles of winds that are no less severe than the worst wind conditions under which flight might be attempted, and must account for uncertainty in the wind conditions....

  13. 14 CFR 417.207 - Trajectory analysis.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... the requirements of paragraph (a) of this section. (c) Wind effects. A trajectory analysis must account for all wind effects, including profiles of winds that are no less severe than the worst wind conditions under which flight might be attempted, and must account for uncertainty in the wind conditions....

  14. 14 CFR 417.207 - Trajectory analysis.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... the requirements of paragraph (a) of this section. (c) Wind effects. A trajectory analysis must account for all wind effects, including profiles of winds that are no less severe than the worst wind conditions under which flight might be attempted, and must account for uncertainty in the wind conditions....

  15. TAOS. Trajectory Analysis and Optimization System

    SciTech Connect

    Salguero, D.E.

    1995-12-09

    TAOS is a general-purpose software tool capable of analyzing nearly any type of three degree-of-freedom point-mass, high-speed trajectory. Input files contain aerodynamic coefficients, propulsion data, and a trajectory description. The trajectory description divides the trajectory into segments, and within each segment, guidance rules provided by the user describe how the trajectory is computed. Output files contain tabulated trajectory information such as position, velocity, and acceleration. Parametric optimization provides a powerful method for satisfying mission-planning constraints, and trajectories involving more than one vehicle can be computed within a single problem.

  16. The ESA's Space Trajectory Analysis software suite

    NASA Astrophysics Data System (ADS)

    Ortega, Guillermo

    The European Space Agency (ESA) initiated in 2005 an internal activity to develop an open source software suite involving university science departments and research institutions all over the world. This project is called the "Space Trajectory Analysis" or STA. This article describes the birth of STA and its present configuration. One of the STA aims is to promote the exchange of technical ideas, and raise knowledge and competence in the areas of applied mathematics, space engineering, and informatics at University level. Conceived as a research and education tool to support the analysis phase of a space mission, STA is able to visualize a wide range of space trajectories. These include among others ascent, re-entry, descent and landing trajectories, orbits around planets and moons, interplanetary trajectories, rendezvous trajectories, etc. The article explains that STA project is an original idea of the Technical Directorate of ESA. It was born in August 2005 to provide a framework in astrodynamics research at University level. As research and education software applicable to Academia, a number of Universities support this development by joining ESA in leading the development. ESA and Universities partnership are expressed in the STA Steering Board. Together with ESA, each University has a chair in the board whose tasks are develop, control, promote, maintain, and expand the software suite. The article describes that STA provides calculations in the fields of spacecraft tracking, attitude analysis, coverage and visibility analysis, orbit determination, position and velocity of solar system bodies, etc. STA implements the concept of "space scenario" composed of Solar system bodies, spacecraft, ground stations, pads, etc. It is able to propagate the orbit of a spacecraft where orbital propagators are included. STA is able to compute communication links between objects of a scenario (coverage, line of sight), and to represent the trajectory computations and

  17. Trajectory analysis and optimization system (TAOS) user`s manual

    SciTech Connect

    Salguero, D.E.

    1995-12-01

    The Trajectory Analysis and Optimization System (TAOS) is software that simulates point--mass trajectories for multiple vehicles. It expands upon the capabilities of the Trajectory Simulation and Analysis program (TAP) developed previously at Sandia National Laboratories. TAOS is designed to be a comprehensive analysis tool capable of analyzing nearly any type of three degree-of-freedom, point-mass trajectory. Trajectories are broken into segments, and within each segment, guidance rules provided by the user control how the trajectory is computed. Parametric optimization provides a powerful method for satisfying mission-planning constraints. Althrough TAOS is not interactive, its input and output files have been designed for ease of use. When compared to TAP, the capability to analyze trajectories for more than one vehicle is the primary enhancement, although numerous other small improvements have been made. This report documents the methods used in TAOS as well as the input and output file formats.

  18. Stochastic and fractal analysis of fracture trajectories

    NASA Technical Reports Server (NTRS)

    Bessendorf, Michael H.

    1987-01-01

    Analyses of fracture trajectories are used to investigate structures that fall between 'micro' and 'macro' scales. It was shown that fracture trajectories belong to the class of nonstationary processes. It was also found that correlation distance, which may be related to a characteristic size of a fracture process, increases with crack length. An assemblage of crack trajectory processes may be considered as a diffusive process. Chudnovsky (1981-1985) introduced a 'crack diffusion coefficient' d which reflects the ability of the material to deviate the crack trajectory from the most energetically efficient path and thus links the material toughness to its structure. For the set of fracture trajectories in AISI 304 steel, d was found to be equal to 1.04 microns. The fractal dimension D for the same set of trajectories was found to be 1.133.

  19. Soccer Ball Lift Coefficients via Trajectory Analysis

    ERIC Educational Resources Information Center

    Goff, John Eric; Carre, Matt J.

    2010-01-01

    We performed experiments in which a soccer ball was launched from a machine while two high-speed cameras recorded portions of the trajectory. Using the trajectory data and published drag coefficients, we extracted lift coefficients for a soccer ball. We determined lift coefficients for a wide range of spin parameters, including several spin…

  20. Trajectory Based Behavior Analysis for User Verification

    NASA Astrophysics Data System (ADS)

    Pao, Hsing-Kuo; Lin, Hong-Yi; Chen, Kuan-Ta; Fadlil, Junaidillah

    Many of our activities on computer need a verification step for authorized access. The goal of verification is to tell apart the true account owner from intruders. We propose a general approach for user verification based on user trajectory inputs. The approach is labor-free for users and is likely to avoid the possible copy or simulation from other non-authorized users or even automatic programs like bots. Our study focuses on finding the hidden patterns embedded in the trajectories produced by account users. We employ a Markov chain model with Gaussian distribution in its transitions to describe the behavior in the trajectory. To distinguish between two trajectories, we propose a novel dissimilarity measure combined with a manifold learnt tuning for catching the pairwise relationship. Based on the pairwise relationship, we plug-in any effective classification or clustering methods for the detection of unauthorized access. The method can also be applied for the task of recognition, predicting the trajectory type without pre-defined identity. Given a trajectory input, the results show that the proposed method can accurately verify the user identity, or suggest whom owns the trajectory if the input identity is not provided.

  1. Mars Ascent Propulsion Trades with Trajectory Analysis

    SciTech Connect

    Whitehead, J

    2004-04-22

    Optimized trajectories to a 500 km circular orbit are calculated for vehicles having a 100 kg Mars launch mass. Staging trades, thrust optimization, and the importance of vehicle shape for drag are all taken into consideration. The high acceleration of solid rockets requires a steep trajectory for drag avoidance, followed by a relatively large circularization burn, appropriate for a second stage. Liquid thrust reduces drag, resulting in less steep trajectories which have small circularization burns. Liquid propulsion requires less total {Delta}v, and offers options for multiple stages or just one. Graphs of payload mass versus stage propellant fractions are compared for liquid and solid propulsion.

  2. Analysis of Petal Rotation Trajectory Characteristics

    NASA Technical Reports Server (NTRS)

    Anderson, Rodney L.; Campagnola, Stefano; Buffington, Brent B.

    2014-01-01

    In this study, the characteristics of petal rotation trajectories are explored in both the two-body and circular restricted three-body problem (CRTBP) models. Petal rotation trajectories alternate long and short resonances of different kinds to rotate the line of apsides. They are typically computed using the patched conic model, and they are used in a number of different missions and mission concepts including Cassini, JUICE, and Europa mission concepts. Petal rotation trajectories are first analyzed here using the patched conic model to quantify their characteristics and search for cases with fast rotation of the line of apsides. When they are computed in the CRTBP, they are unstable periodic orbits with corresponding stable and unstable manifolds. The characteristics of these orbits are explored from a dynamical systems perspective in the second phase of the study.

  3. MEGA-MD: molecular evolutionary genetics analysis software with mutational diagnosis of amino acid variation.

    PubMed

    Stecher, Glen; Liu, Li; Sanderford, Maxwell; Peterson, Daniel; Tamura, Koichiro; Kumar, Sudhir

    2014-05-01

    Computational diagnosis of amino acid variants in the human exome is the first step in assessing the disruptive impacts of non-synonymous single nucleotide variants (nsSNVs) on human health and disease. The Molecular Evolutionary Genetics Analysis software with mutational diagnosis (MEGA-MD) is a suite of tools developed to forecast the deleteriousness of nsSNVs using multiple methods and to explore nsSNVs in the context of the variability permitted in the long-term evolution of the affected position. In its graphical interface for use on desktops, it enables interactive computational diagnosis and evolutionary exploration of nsSNVs. As a web service, MEGA-MD is suitable for diagnosing variants on an exome scale. The MEGA-MD suite intends to serve the needs for conducting low- and high-throughput analysis of nsSNVs in diverse applications.

  4. Quantifying ataxia: ideal trajectory analysis--a technical note

    NASA Technical Reports Server (NTRS)

    McPartland, M. D.; Krebs, D. E.; Wall, C. 3rd

    2000-01-01

    We describe a quantitative method to assess repeated stair stepping stability. In both the mediolateral (ML) and anterioposterior (AP) directions, the trajectory of the subject's center of mass (COM) was compared to an ideal sinusoid. The two identified sinusoids were unique in each direction but coupled. Two dimensionless numbers-the mediolateral instability index (IML) and AP instability index (IAP)-were calculated using the COM trajectory and ideal sinusoids for each subject with larger index values resulting from less stable performance. The COM trajectories of nine nonimpaired controls and six patients diagnosed with unilateral or bilateral vestibular labyrinth hypofunction were analyzed. The average IML and IAP values of labyrinth disorder patients were respectively 127% and 119% greater than those of controls (p<0.014 and 0.006, respectively), indicating that the ideal trajectory analysis distinguishes persons with labyrinth disorder from those without. The COM trajectories also identify movement inefficiencies attributable to vestibulopathy.

  5. Hodograph analysis in aircraft trajectory optimization

    NASA Technical Reports Server (NTRS)

    Cliff, Eugene M.; Seywald, Hans; Bless, Robert R.

    1993-01-01

    An account is given of key geometrical concepts involved in the use of a hodograph as an optimal control theory resource which furnishes a framework for geometrical interpretation of the minimum principle. Attention is given to the effects of different convexity properties on the hodograph, which bear on the existence of solutions and such types of controls as chattering controls, 'bang-bang' control, and/or singular control. Illustrative aircraft trajectory optimization problems are examined in view of this use of the hodograph.

  6. Visual traffic jam analysis based on trajectory data.

    PubMed

    Wang, Zuchao; Lu, Min; Yuan, Xiaoru; Zhang, Junping; van de Wetering, Huub

    2013-12-01

    In this work, we present an interactive system for visual analysis of urban traffic congestion based on GPS trajectories. For these trajectories we develop strategies to extract and derive traffic jam information. After cleaning the trajectories, they are matched to a road network. Subsequently, traffic speed on each road segment is computed and traffic jam events are automatically detected. Spatially and temporally related events are concatenated in, so-called, traffic jam propagation graphs. These graphs form a high-level description of a traffic jam and its propagation in time and space. Our system provides multiple views for visually exploring and analyzing the traffic condition of a large city as a whole, on the level of propagation graphs, and on road segment level. Case studies with 24 days of taxi GPS trajectories collected in Beijing demonstrate the effectiveness of our system.

  7. The Best Estimated Trajectory Analysis for Pad Abort One

    NASA Technical Reports Server (NTRS)

    Kutty, Prasad; Noonan, Meghan; Karlgaard, Christopher; Beck, Roger

    2011-01-01

    I. Best Estimated Trajectory (BET) objective: a) Produce reconstructed trajectory of the PA-1 flight to understand vehicle dynamics and aid other post flight analyses. b) Leverage all measurement sources taken of vehicle during flight to produce the most accurate estimate of vehicle trajectory. c) Generate trajectory reconstructions of the Crew Module (CM), Launch Abort System (LAS), and Forward Bay Cover (FBC). II. BET analysis was started immediately following the PA-1 mission and was completed in September, 2010 a) Quick look version of BET released 5/25/2010: initial repackaging of SIGI data. b) Preliminary version of BET released 7/6/2010: first blended solution using available sources of external measurements. c) Final version of BET released 9/1/2010: final blended solution using all available sources of data.

  8. Analysis of alternative-fuel price trajectories

    SciTech Connect

    Not Available

    1980-12-31

    Findings are presented from a study to (1) acquire, analyze, and report alternative published price projections including both oil- and coal-price trajectories, and to (2) apply the fixed-annuity formula to the updated primary source projections (Energy Information Administration; Data Resources, Inc.; and Wharton Econometric Forecasting Associates, Inc.) and to the newly acquired price projections. This report also encompasses: comparisons of key assumptions underlying the price projections, and a discussion of the applicability of the fixed-annuity formula as used in the alternative-cost calculation. Section II contains graphic presentations of all updated and newly acquired coal and oil price forecasts and the corresponding calculated annuity equivalents, tabulated presentations and discussions of each forecast and underlying assumptions, and a description of how each forecast price series was transformed into input for the present-value formulas. Section III presents the fixed-annuity formula employed and discusses its appropriateness for this application. Section IV discusses the applicability of the net present value approach for comparing alternate-fuel price trajectories. Appendix A contains a listing of contacts as potential sources of price forecasts. Appendix B contains the raw forecast data from each forecast source and the coal and oil price series derived from the raw data which were actually input into the cost calculation procedure. Appendix C contains a description and listing of the computer program developed to implement the cost calculation procedure. Finally, Appendix D contains tabulations and discussions of other alternative world crude price forecasts that were identified, but for which no corresponding coal-price projections were available. (MCW)

  9. Analysis and Interpretation of Superresolution Single-Particle Trajectories.

    PubMed

    Holcman, D; Hoze, N; Schuss, Z

    2015-11-01

    A large number (tens of thousands) of single molecular trajectories on a cell membrane can now be collected by superresolution methods. The data contains information about the diffusive motion of molecule, proteins, or receptors and here we review methods for its recovery by statistical analysis of the data. The information includes the forces, organization of the membrane, the diffusion tensor, the long-time behavior of the trajectories, and more. To recover the long-time behavior and statistics of long trajectories, a stochastic model of their nonequilibrium motion is required. Modeling and data analysis serve extracting novel biophysical features at an unprecedented spatiotemporal resolution. The review presents data analysis, modeling, and stochastic simulations applied in particular on surface receptors evolving in neuronal cells.

  10. CFD Analysis of Swing of Cricket Ball and Trajectory Prediction

    NASA Astrophysics Data System (ADS)

    G, Jithin; Tom, Josin; Ruishikesh, Kamat; Jose, Jyothish; Kumar, Sanjay

    2013-11-01

    This work aims to understand the aerodynamics associated with the flight and swing of a cricket ball and predict its flight trajectory over the course of the game: at start (smooth ball) and as the game progresses (rough ball). Asymmetric airflow over the ball due to seam orientation and surface roughness can cause flight deviation (swing). The values of Drag, Lift and Side forces which are crucial for determining the trajectory of the ball were found with the help of FLUENT using the standard K- ɛ model. Analysis was done to study how the ball velocity, spin imparted to be ball and the tilt of the seam affects the movement of the ball through air. The governing force balance equations in 3 dimensions in combination a MATLAB code which used Heun's method was used for obtaining the trajectory of the ball. The conditions for the conventional swing and reverse swing to occur were deduced from the analysis and found to be in alignment with the real life situation. Critical seam angle for maximum swing and transition speed for normal to reverse swing were found out. The obtained trajectories were compared to real life hawk eye trajectories for validation. The analysis results were in good agreement with the real life situation.

  11. Wettability of graphitic-carbon and silicon surfaces: MD modeling and theoretical analysis

    SciTech Connect

    Ramos-Alvarado, Bladimir; Kumar, Satish; Peterson, G. P.

    2015-07-28

    The wettability of graphitic carbon and silicon surfaces was numerically and theoretically investigated. A multi-response method has been developed for the analysis of conventional molecular dynamics (MD) simulations of droplets wettability. The contact angle and indicators of the quality of the computations are tracked as a function of the data sets analyzed over time. This method of analysis allows accurate calculations of the contact angle obtained from the MD simulations. Analytical models were also developed for the calculation of the work of adhesion using the mean-field theory, accounting for the interfacial entropy changes. A calibration method is proposed to provide better predictions of the respective contact angles under different solid-liquid interaction potentials. Estimations of the binding energy between a water monomer and graphite match those previously reported. In addition, a breakdown in the relationship between the binding energy and the contact angle was observed. The macroscopic contact angles obtained from the MD simulations were found to match those predicted by the mean-field model for graphite under different wettability conditions, as well as the contact angles of Si(100) and Si(111) surfaces. Finally, an assessment of the effect of the Lennard-Jones cutoff radius was conducted to provide guidelines for future comparisons between numerical simulations and analytical models of wettability.

  12. The symbolic computation and automatic analysis of trajectories

    NASA Technical Reports Server (NTRS)

    Grossman, Robert

    1991-01-01

    Research was generally done on computation of trajectories of dynamical systems, especially control systems. Algorithms were further developed for rewriting expressions involving differential operators. The differential operators involved arise in the local analysis of nonlinear control systems. An initial design was completed of the system architecture for software to analyze nonlinear control systems using data base computing.

  13. Spacecraft Trajectory Analysis and Mission Planning Simulation (STAMPS) Software

    NASA Technical Reports Server (NTRS)

    Puckett, Nancy; Pettinger, Kris; Hallstrom,John; Brownfield, Dana; Blinn, Eric; Williams, Frank; Wiuff, Kelli; McCarty, Steve; Ramirez, Daniel; Lamotte, Nicole; Vu, Tuan

    2014-01-01

    STAMPS simulates either three- or six-degree-of-freedom cases for all spacecraft flight phases using translated HAL flight software or generic GN&C models. Single or multiple trajectories can be simulated for use in optimization and dispersion analysis. It includes math models for the vehicle and environment, and currently features a "C" version of shuttle onboard flight software. The STAMPS software is used for mission planning and analysis within ascent/descent, rendezvous, proximity operations, and navigation flight design areas.

  14. Mars Exploration Rovers Entry, Descent, and Landing Trajectory Analysis

    NASA Technical Reports Server (NTRS)

    Desai, Prasun N.; Knocke, Philip C.

    2004-01-01

    The Mars Exploration Rover mission successfully landed two rovers "Spirit" and "Opportunity" on Mars on January 4th and 25th of 2004, respectively. The trajectory analysis performed to define the entry, descent, and landing (EDL) scenario is described. The entry requirements and constraints are presented, as well as uncertainties used in a Monte Carlo dispersion analysis to statistically assess the robustness of the entry design to off-nominal conditions. In the analysis, six-degree-of-freedom and three-degree-of-freedom trajectory results are compared to assess the entry characteristics of the capsule. Comparison of the preentry results to preliminary post-landing reconstruction data shows that all EDL parameters were within the requirements. In addition, the final landing position for both "Spirit" and "Opportunity" were within 15 km of the predicted landing location.

  15. Integrated trajectory and control analysis for generic hypersonic vehicles

    NASA Technical Reports Server (NTRS)

    Hattis, Philip D.; Malchow, Harvey L.; Shaughnessy, John; Chowdhry, Rajiv S.

    1991-01-01

    A tool which supports integrated assessment of air-breathing hypersonic vehicle trajectory management and control strategy has been developed by Hattis and Malchow (1991). Using a two-point boundary value problem solution technique, the tool can construct an entire near-minimum-fuel trajectory and desired control strategy from takeoff to orbit, while satisfying physically derived inequality constraints and while achieving efficient propulsive mode phasing. A strategy is also formulated to construct preliminary trajectory and control history representations with less computational burden than required for the overall flight profile assessment. A tabulated example hypersonic vehicle model has been used to demonstrate the integrated analysis methodology. To assure good numerical behavior when the algorithm uses tabulated model data, a multidimensional cubic spline curve smoothing routine has been developed. A dynamic-pressure-constrained, near-fuel-optimal trajectory was computed to provide examples of information that the methodology can provide. Previously unspecified propulsive discontinuities were located, flight regimes demanding rapid attitude changes were identified, available and closed-loop controller authority was ascertained, and inadequacies in vehicle and specific subsystem model representations were determined.

  16. Integrated trajectory and control analysis for generic hypersonic vehicles

    NASA Astrophysics Data System (ADS)

    Hattis, Philip D.; Malchow, Harvey L.; Shaughnessy, John; Chowdhry, Rajiv S.

    1991-12-01

    A tool which supports integrated assessment of air-breathing hypersonic vehicle trajectory management and control strategy has been developed by Hattis and Malchow (1991). Using a two-point boundary value problem solution technique, the tool can construct an entire near-minimum-fuel trajectory and desired control strategy from takeoff to orbit, while satisfying physically derived inequality constraints and while achieving efficient propulsive mode phasing. A strategy is also formulated to construct preliminary trajectory and control history representations with less computational burden than required for the overall flight profile assessment. A tabulated example hypersonic vehicle model has been used to demonstrate the integrated analysis methodology. To assure good numerical behavior when the algorithm uses tabulated model data, a multidimensional cubic spline curve smoothing routine has been developed. A dynamic-pressure-constrained, near-fuel-optimal trajectory was computed to provide examples of information that the methodology can provide. Previously unspecified propulsive discontinuities were located, flight regimes demanding rapid attitude changes were identified, available and closed-loop controller authority was ascertained, and inadequacies in vehicle and specific subsystem model representations were determined.

  17. Trajectory Browser: An Online Tool for Interplanetary Trajectory Analysis and Visualization

    NASA Technical Reports Server (NTRS)

    Foster, Cyrus James

    2013-01-01

    The trajectory browser is a web-based tool developed at the NASA Ames Research Center for finding preliminary trajectories to planetary bodies and for providing relevant launch date, time-of-flight and (Delta)V requirements. The site hosts a database of transfer trajectories from Earth to planets and small-bodies for various types of missions such as rendezvous, sample return or flybys. A search engine allows the user to find trajectories meeting desired constraints on the launch window, mission duration and (Delta)V capability, while a trajectory viewer tool allows the visualization of the heliocentric trajectory and the detailed mission itinerary. The anticipated user base of this tool consists primarily of scientists and engineers designing interplanetary missions in the context of pre-phase A studies, particularly for performing accessibility surveys to large populations of small-bodies.

  18. Numerical analysis and experimental verification of vehicle trajectories

    NASA Astrophysics Data System (ADS)

    Wekezer, J. W.; Cichocki, K.

    2003-09-01

    The paper presents research results of a study, in which computational mechanics was utilized to predict vehicle trajectories upon traversing standard Florida DOT street curbs. Computational analysis was performed using LS-DYNA non-linear, finite element computer code with two public domain, finite element models of motor vehicles: Ford Festiva and Ford Taurus. Shock absorbers were modeled using discrete spring and damper elements. Connections for the modifie suspension systems were carefully designed to assure proper range of motion for the suspension models. Inertia properties of the actual vehicles were collected using tilt-table tests and were used for LS-DYNA vehicle models. Full-scale trajectory tests have been performed at Texas Transportation Institute to validate the numerical models and predictions from computational mechanics. Experiments were conducted for Ford Festiva and Ford Taurus, both for two values of approach angle: 15 and 90 degrees, with impact velocity of 45 mph. Experimental data including accelerations, displacements and overall vehicles behavior were collected by high-speed video cameras and have e been compared with numerical results. Verification results indicated a good correlation between computational analysis and full-scale test data. The study also underlined a strong dependence of properly modeled suspension and tires on resulting vehicle trajectories.

  19. Statistical clustering techniques for the analysis of long molecular dynamics trajectories: analysis of 2.2-ns trajectories of YPGDV.

    PubMed

    Karpen, M E; Tobias, D J; Brooks, C L

    1993-01-19

    The microscopic interactions and mechanisms leading to nascent protein folding events are generally unknown. While such short time-scale events are difficult to study experimentally, molecular dynamics simulations of peptides can provide a useful model for studying events related to protein folding initiation. Recently, two extremely long molecular dynamics simulations (2.2 ns each) were carried out on the pentapeptide Tyr-Pro-Gly-Asp-Val [Tobias, D. J., Mertz, J. E., & Brooks, C. L., III (1991) Biochemistry 30, 6054-6058] that forms stable reverse turns in solution. Tobias et al. examined folding events in this large system (approximately 30,000 conformations) using traditional methods of trajectory analysis. The shear magnitude of this problem prompted us to develop an automated approach, based on self-organizing neural nets, to extract the key features of the molecular dynamics trajectory. The neural net is used to perform conformational clustering, which reduces the complexity of a system while minimizing the loss of information. The conformations were grouped together using distances in dihedral angle space as a measure of conformational similarity. The resulting clusters represent "conformational states", and transitions between these states were examined to identify mechanisms of conformational change. Many conformational changes involved the rotation of only a single dihedral angle, but concerted angle changes were also found. Most of the conformational information in the 30,000 samples from the full trajectories was retained in the relatively few resultant clusters, providing a powerful tool for analysis of an expanding base of large molecular simulations.

  20. Mars Hybrid Propulsion System Trajectory Analysis. Part I; Crew Missions

    NASA Technical Reports Server (NTRS)

    Chai, Patrick R.; Merrill, Raymond G.; Qu, Min

    2015-01-01

    NASAs Human spaceflight Architecture team is developing a reusable hybrid transportation architecture in which both chemical and electric propulsion systems are used to send crew and cargo to Mars destinations such as Phobos, Deimos, the surface of Mars, and other orbits around Mars. By combining chemical and electrical propulsion into a single space- ship and applying each where it is more effective, the hybrid architecture enables a series of Mars trajectories that are more fuel-efficient than an all chemical architecture without significant increases in flight times. This paper provides the analysis of the interplanetary segments of the three Evolvable Mars Campaign crew missions to Mars using the hybrid transportation architecture. The trajectory analysis provides departure and arrival dates and propellant needs for the three crew missions that are used by the campaign analysis team for campaign build-up and logistics aggregation analysis. Sensitivity analyses were performed to investigate the impact of mass growth, departure window, and propulsion system performance on the hybrid transportation architecture. The results and system analysis from this paper contribute to analyses of the other human spaceflight architecture team tasks and feed into the definition of the Evolvable Mars Campaign.

  1. Estimation of Hydrogen-Exchange Protection Factors from MD Simulation Based on Amide Hydrogen Bonding Analysis.

    PubMed

    Park, In-Hee; Venable, John D; Steckler, Caitlin; Cellitti, Susan E; Lesley, Scott A; Spraggon, Glen; Brock, Ansgar

    2015-09-28

    Hydrogen exchange (HX) studies have provided critical insight into our understanding of protein folding, structure, and dynamics. More recently, hydrogen exchange mass spectrometry (HX-MS) has become a widely applicable tool for HX studies. The interpretation of the wealth of data generated by HX-MS experiments as well as other HX methods would greatly benefit from the availability of exchange predictions derived from structures or models for comparison with experiment. Most reported computational HX modeling studies have employed solvent-accessible-surface-area based metrics in attempts to interpret HX data on the basis of structures or models. In this study, a computational HX-MS prediction method based on classification of the amide hydrogen bonding modes mimicking the local unfolding model is demonstrated. Analysis of the NH bonding configurations from molecular dynamics (MD) simulation snapshots is used to determine partitioning over bonded and nonbonded NH states and is directly mapped into a protection factor (PF) using a logistics growth function. Predicted PFs are then used for calculating deuteration values of peptides and compared with experimental data. Hydrogen exchange MS data for fatty acid synthase thioesterase (FAS-TE) collected for a range of pHs and temperatures was used for detailed evaluation of the approach. High correlation between prediction and experiment for observable fragment peptides is observed in the FAS-TE and additional benchmarking systems that included various apo/holo proteins for which literature data were available. In addition, it is shown that HX modeling can improve experimental resolution through decomposition of in-exchange curves into rate classes, which correlate with prediction from MD. Successful rate class decompositions provide further evidence that the presented approach captures the underlying physical processes correctly at the single residue level. This assessment is further strengthened in a comparison of

  2. Eucb: A C++ program for molecular dynamics trajectory analysis

    NASA Astrophysics Data System (ADS)

    Tsoulos, Ioannis G.; Stavrakoudis, Athanassios

    2011-03-01

    Eucb is a standalone program for geometrical analysis of molecular dynamics trajectories of protein systems. The program is written in GNU C++ and it can be installed in any operating system running a C++ compiler. The program performs its analytical tasks based on user supplied keywords. The source code is freely available from http://stavrakoudis.econ.uoi.gr/eucb under LGPL 3 license. Program summaryProgram title:Eucb Catalogue identifier: AEIC_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEIC_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 31 169 No. of bytes in distributed program, including test data, etc.: 297 364 Distribution format: tar.gz Programming language: GNU C++ Computer: The tool is designed and tested on GNU/Linux systems Operating system: Unix/Linux systems RAM: 2 MB Supplementary material: Sample data files are available Classification: 3 Nature of problem: Analysis of molecular dynamics trajectories. Solution method: The program finds all possible interactions according to input files and the user instructions. Then it reads all the trajectory frames and finds those frames in which these interactions occur, under certain geometrical criteria. This is a blind search, without a priori knowledge if a certain interaction occurs or not. The program exports time series of these quantities (distance, angles, etc.) and appropriate descriptive statistics. Running time: Depends on the input data and the required options.

  3. Singular perturbation analysis of AOTV-related trajectory optimization problems

    NASA Technical Reports Server (NTRS)

    Calise, Anthony J.; Bae, Gyoung H.

    1990-01-01

    The problem of real time guidance and optimal control of Aeroassisted Orbit Transfer Vehicles (AOTV's) was addressed using singular perturbation theory as an underlying method of analysis. Trajectories were optimized with the objective of minimum energy expenditure in the atmospheric phase of the maneuver. Two major problem areas were addressed: optimal reentry, and synergetic plane change with aeroglide. For the reentry problem, several reduced order models were analyzed with the objective of optimal changes in heading with minimum energy loss. It was demonstrated that a further model order reduction to a single state model is possible through the application of singular perturbation theory. The optimal solution for the reduced problem defines an optimal altitude profile dependent on the current energy level of the vehicle. A separate boundary layer analysis is used to account for altitude and flight path angle dynamics, and to obtain lift and bank angle control solutions. By considering alternative approximations to solve the boundary layer problem, three guidance laws were derived, each having an analytic feedback form. The guidance laws were evaluated using a Maneuvering Reentry Research Vehicle model and all three laws were found to be near optimal. For the problem of synergetic plane change with aeroglide, a difficult terminal boundary layer control problem arises which to date is found to be analytically intractable. Thus a predictive/corrective solution was developed to satisfy the terminal constraints on altitude and flight path angle. A composite guidance solution was obtained by combining the optimal reentry solution with the predictive/corrective guidance method. Numerical comparisons with the corresponding optimal trajectory solutions show that the resulting performance is very close to optimal. An attempt was made to obtain numerically optimized trajectories for the case where heating rate is constrained. A first order state variable inequality

  4. Database Driven 6-DOF Trajectory Simulation for Debris Transport Analysis

    NASA Technical Reports Server (NTRS)

    West, Jeff

    2008-01-01

    Debris mitigation and risk assessment have been carried out by NASA and its contractors supporting Space Shuttle Return-To-Flight (RTF). As a part of this assessment, analysis of transport potential for debris that may be liberated from the vehicle or from pad facilities prior to tower clear (Lift-Off Debris) is being performed by MSFC. This class of debris includes plume driven and wind driven sources for which lift as well as drag are critical for the determination of the debris trajectory. As a result, NASA MSFC has a need for a debris transport or trajectory simulation that supports the computation of lift effect in addition to drag without the computational expense of fully coupled CFD with 6-DOF. A database driven 6-DOF simulation that uses aerodynamic force and moment coefficients for the debris shape that are interpolated from a database has been developed to meet this need. The design, implementation, and verification of the database driven six degree of freedom (6-DOF) simulation addition to the Lift-Off Debris Transport Analysis (LODTA) software are discussed in this paper.

  5. Ares I-X Best Estimated Trajectory Analysis and Results

    NASA Technical Reports Server (NTRS)

    Karlgaard, Christopher D.; Beck, Roger E.; Starr, Brett R.; Derry, Stephen D.; Brandon, Jay; Olds, Aaron D.

    2011-01-01

    The Ares I-X trajectory reconstruction produced best estimated trajectories of the flight test vehicle ascent through stage separation, and of the first and upper stage entries after separation. The trajectory reconstruction process combines on-board, ground-based, and atmospheric measurements to produce the trajectory estimates. The Ares I-X vehicle had a number of on-board and ground based sensors that were available, including inertial measurement units, radar, air-data, and weather balloons. However, due to problems with calibrations and/or data, not all of the sensor data were used. The trajectory estimate was generated using an Iterative Extended Kalman Filter algorithm, which is an industry standard processing algorithm for filtering and estimation applications. This paper describes the methodology and results of the trajectory reconstruction process, including flight data preprocessing and input uncertainties, trajectory estimation algorithms, output transformations, and comparisons with preflight predictions.

  6. Mars Hybrid Propulsion System Trajectory Analysis. Part II; Cargo Missions

    NASA Technical Reports Server (NTRS)

    Chai, Patrick R.; Merrill, Raymond G.; Qu, Min

    2015-01-01

    NASA's Human Spaceflight Architecture Team is developing a reusable hybrid transportation architecture in which both chemical and electric propulsion systems are used to send crew and cargo to Mars destinations such as Phobos, Deimos, the surface of Mars, and other orbits around Mars. By combining chemical and electrical propulsion into a single spaceship and applying each where it is more effective, the hybrid architecture enables a series of Mars trajectories that are more fuel-efficient than an all chemical architecture without significant increases in flight times. This paper shows the feasibility of the hybrid transportation architecture to pre-deploy cargo to Mars and Phobos in support of the Evolvable Mars Campaign crew missions. The analysis shows that the hybrid propulsion stage is able to deliver all of the current manifested payload to Phobos and Mars through the first three crew missions. The conjunction class trajectory also allows the hybrid propulsion stage to return to Earth in a timely fashion so it can be reused for additional cargo deployment. The 1,100 days total trip time allows the hybrid propulsion stage to deliver cargo to Mars every other Earth-Mars transit opportunity. For the first two Mars surface mission in the Evolvable Mars Campaign, the short trip time allows the hybrid propulsion stage to be reused for three round-trip journeys to Mars, which matches the hybrid propulsion stage's designed lifetime for three round-trip crew missions to the Martian sphere of influence.

  7. Dynamic analysis and trajectory tracking of a tethered space robot

    NASA Astrophysics Data System (ADS)

    Soltani, Mehrzad; Keshmiri, Mehdi; Misra, Arun K.

    2016-11-01

    Dynamic analysis and trajectory tracking of a Tethered Space Robot (TSR) is investigated in this paper. A hybrid controller is used to perform the control task. It consists of two components, the first one deals with librational motion of the tether, while the second one takes care of the manipulator motion. A Nonlinear Model Predictive Control (NMPC) approach is used to control the tether libration; for this purpose, the libration is described by a single degree of freedom and the tether length rate is employed as the input to suppress the librational motion. A modified Computed Torque Method (CTM) is used to control the manipulator motion. The dynamic interaction between the manipulator motion and the librational motion is considered both in the system dynamics and control of the system. Using numerical simulations, performance of the proposed control system is evaluated for end-effector positioning as well as for trajectory tracking for two cases: a Low Earth Orbit (LEO) and the Geostationary Earth Orbit (GEO).

  8. Beam Optics Analysis - An Advanced 3D Trajectory Code

    SciTech Connect

    Ives, R. Lawrence; Bui, Thuc; Vogler, William; Neilson, Jeff; Read, Mike; Shephard, Mark; Bauer, Andrew; Datta, Dibyendu; Beal, Mark

    2006-01-03

    Calabazas Creek Research, Inc. has completed initial development of an advanced, 3D program for modeling electron trajectories in electromagnetic fields. The code is being used to design complex guns and collectors. Beam Optics Analysis (BOA) is a fully relativistic, charged particle code using adaptive, finite element meshing. Geometrical input is imported from CAD programs generating ACIS-formatted files. Parametric data is inputted using an intuitive, graphical user interface (GUI), which also provides control of convergence, accuracy, and post processing. The program includes a magnetic field solver, and magnetic information can be imported from Maxwell 2D/3D and other programs. The program supports thermionic emission and injected beams. Secondary electron emission is also supported, including multiple generations. Work on field emission is in progress as well as implementation of computer optimization of both the geometry and operating parameters. The principle features of the program and its capabilities are presented.

  9. Trajectory analysis of the rotational dynamics of molecules

    SciTech Connect

    Petrov, S. V. Lokshtanov, S. E.

    2015-08-15

    A method for analysis of the rotational dynamics of molecular systems has been proposed on the basis of the calculation of the set of exact classical vibrational–rotational trajectories. It has been proposed to compose and to numerically solve the complete system of dynamic equations consisting of Hamilton’s equations and generalized Euler equations for an arbitrary system. The computer algebra system can be applied to automatize the process of derivation and subsequent solution of dynamic equations. The variation of the picture of known bifurcation in the rotational dynamics of symmetric triatomic hydride molecules with an increase in vibrational excitation has been studied within the proposed approach. It has been shown that manifestations of bifurcation completely disappear at a quite high level of vibrational excitations.

  10. Beam Optics Analysis — An Advanced 3D Trajectory Code

    NASA Astrophysics Data System (ADS)

    Ives, R. Lawrence; Bui, Thuc; Vogler, William; Neilson, Jeff; Read, Mike; Shephard, Mark; Bauer, Andrew; Datta, Dibyendu; Beal, Mark

    2006-01-01

    Calabazas Creek Research, Inc. has completed initial development of an advanced, 3D program for modeling electron trajectories in electromagnetic fields. The code is being used to design complex guns and collectors. Beam Optics Analysis (BOA) is a fully relativistic, charged particle code using adaptive, finite element meshing. Geometrical input is imported from CAD programs generating ACIS-formatted files. Parametric data is inputted using an intuitive, graphical user interface (GUI), which also provides control of convergence, accuracy, and post processing. The program includes a magnetic field solver, and magnetic information can be imported from Maxwell 2D/3D and other programs. The program supports thermionic emission and injected beams. Secondary electron emission is also supported, including multiple generations. Work on field emission is in progress as well as implementation of computer optimization of both the geometry and operating parameters. The principle features of the program and its capabilities are presented.

  11. Hi-G electronic gated camera for precision trajectory analysis

    NASA Astrophysics Data System (ADS)

    Snyder, Donald R.; Payne, Scott; Keller, Ed; Longo, Salvatore; Caudle, Dennis E.; Walker, Dennis C.; Sartor, Mark A.; Keeler, Joe E.; Kerr, David A.; Fail, R. Wallace; Gannon, Jim; Carrol, Ernie; Jamison, Todd A.

    1997-12-01

    It is extremely difficult and expensive to determine the flight attitude and aimpoint of small maneuvering miniature air vehicles from ground based fixed or tracking photography. Telemetry alone cannot provide sufficient information bandwidth on 'what' the ground tracking is seeing and consequently 'why' it did or did not function properly. Additionally, it is anticipated that 'smart' and 'brilliant' guided vehicles now in development will require a high resolution imaging support system to determine which target and which part of a ground feature is being used for navigation or targeting. Other requirements include support of sub-component separation from developmental supersonic vehicles, where the clean separation from the container is not determinable from ground based film systems and film cameras do not survive vehicle breakup and impact. Hence, the requirement is to develop and demonstrate an imaging support system for development/testing that can provide the flight vehicle developer/analyst with imagery (combined with miniature telemetry sources) sufficient to recreate the trajectory, terminal navigation, and flight termination events. This project is a development and demonstration of a real-time, launch-rated, shuttered, electronic imager, transmitter, and analysis system. This effort demonstrated boresighted imagery from inside small flight vehicles for post flight analysis of trajectory, and capture of ground imagery during random triggered vehicle functions. The initial studies for this capability have been accomplished by the Experimental Dynamics Section of the Air Force Wright Laboratory, Armament Directorate, Eglin AFB, Florida, and the Telemetry Support Branch of the Army Material Research and Development Center at Picatinny Arsenal, New Jersey. It has been determined that at 1/10,000 of a second exposure time, new ultra-miniature CCD sensors have sufficient sensitivity to image key ground target features without blur, thereby providing data for

  12. The trajectory analysis of bevel planetary gear trains

    SciTech Connect

    Lin, Chen-Chou; Tsai, Lung-Wen

    1991-12-31

    In this paper, the trajectory of bevel planetary wear trains has been studied. The parametric equations of trajectory are derived. It is shown that the trajectory generated by a tracer point on the planet of a bevel planetary gear train is analogous to that of a spur planetary gear train. Two cases, gear ratio equal to one and two, are presented in detail including the geometric description, plane of symmetry, extent of trajectory, number of nodes (cusps) their locations. The criteria for the existence of cusps are verified algebraically, and interpreted from geometrical point of view.

  13. The trajectory analysis of bevel planetary gear trains

    SciTech Connect

    Lin, Chen-Chou; Tsai, Lung-Wen.

    1991-01-01

    In this paper, the trajectory of bevel planetary wear trains has been studied. The parametric equations of trajectory are derived. It is shown that the trajectory generated by a tracer point on the planet of a bevel planetary gear train is analogous to that of a spur planetary gear train. Two cases, gear ratio equal to one and two, are presented in detail including the geometric description, plane of symmetry, extent of trajectory, number of nodes (cusps) their locations. The criteria for the existence of cusps are verified algebraically, and interpreted from geometrical point of view.

  14. Methodologies for the Analysis of Instantaneous Lipid Diffusion in MD Simulations of Large Membrane Systems

    PubMed Central

    Chavent, Matthieu; Reddy, Tyler; Goose, Joseph; Dahl, Anna Caroline E.; Stone, John E.; Jobard, Bruno; Sansom, Mark S.P.

    2014-01-01

    Interactions between lipids and membrane proteins play a key role in determining the nanoscale dynamic and structural properties of biological membranes. Molecular dynamics (MD) simulations provide a valuable tool for studying membrane models, complementing experimental approaches. It is now possible to simulate large membrane systems, such as simplified models of bacterial and viral envelope membranes. Consequently, there is a pressing need to develop tools to visualize and quantify the dynamics of these immense systems, which typically are comprised of millions of particles. To tackle this issue, we have developed visual and quantitative analyses of molecular positions and their velocity field using path line, vector field and streamline techniques. This allows us to highlight large, transient flow-like movements of lipids and to better understand crowding within the lipid bilayer. The current study focuses on visualization and analysis of lipid dynamics. However, the methods are flexible and can be readily applied to e.g. proteins and nanoparticles within large complex membranes. The protocols developed here are readily accessible both as a plugin for the molecular visualization program VMD and as a module for the MDAnalysis library. PMID:25341001

  15. Towards analysis of growth trajectory through multimodal longitudinal MR imaging

    NASA Astrophysics Data System (ADS)

    Sadeghi, Neda; Prastawa, Marcel; Gilmore, John H.; Lin, Weili; Gerig, Guido

    2010-03-01

    The human brain undergoes significant changes in the first few years after birth, but knowledge about this critical period of development is quite limited. Previous neuroimaging studies have been mostly focused on morphometric measures such as volume and shape, although tissue property measures related to the degree of myelination and axon density could also add valuable information to our understanding of brain maturation. Our goal is to complement brain growth analysis via morphometry with the study of longitudinal tissue property changes as reflected in patterns observed in multi-modal structural MRI and DTI. Our preliminary study includes eight healthy pediatric subjects with repeated scans at the age of two weeks, one year, and two years with T1, T2, PD, and DT MRI. Analysis is driven by the registration of multiple modalities and time points within and between subjects into a common coordinate frame, followed by image intensity normalization. Quantitative tractography with diffusion and structural image parameters serves for multi-variate tissue analysis. Different patterns of rapid changes were observed in the corpus callosum and the posterior and anterior internal capsule, structures known for distinctly different myelination growth. There are significant differences in central versus peripheral white matter. We demonstrate that the combined longitudinal analysis of structural and diffusion MRI proves superior to individual modalities and might provide a better understanding of the trajectory of early neurodevelopment.

  16. Detecting Hotspots from Taxi Trajectory Data Using Spatial Cluster Analysis

    NASA Astrophysics Data System (ADS)

    Zhao, P. X.; Qin, K.; Zhou, Q.; Liu, C. K.; Chen, Y. X.

    2015-07-01

    A method of trajectory clustering based on decision graph and data field is proposed in this paper. The method utilizes data field to describe spatial distribution of trajectory points, and uses decision graph to discover cluster centres. It can automatically determine cluster parameters and is suitable to trajectory clustering. The method is applied to trajectory clustering on taxi trajectory data, which are on the holiday (May 1st, 2014), weekday (Wednesday, May 7th, 2014) and weekend (Saturday, May 10th, 2014) respectively, in Wuhan City, China. The hotspots in four hours (8:00-9:00, 12:00-13:00, 18:00-19:00 and 23:00-24:00) for three days are discovered and visualized in heat maps. In the future, we will further research the spatiotemporal distribution and laws of these hotspots, and use more data to carry out the experiments.

  17. Trajectory analysis via a geometric feature space approach

    SciTech Connect

    Rintoul, Mark D.; Wilson, Andrew T.

    2015-10-05

    This study aimed to organize a body of trajectories in order to identify, search for and classify both common and uncommon behaviors among objects such as aircraft and ships. Existing comparison functions such as the Fréchet distance are computationally expensive and yield counterintuitive results in some cases. We propose an approach using feature vectors whose components represent succinctly the salient information in trajectories. These features incorporate basic information such as the total distance traveled and the distance between start/stop points as well as geometric features related to the properties of the convex hull, trajectory curvature and general distance geometry. Additionally, these features can generally be mapped easily to behaviors of interest to humans who are searching large databases. Most of these geometric features are invariant under rigid transformation. Furthermore, we demonstrate the use of different subsets of these features to identify trajectories similar to an exemplar, cluster a database of several hundred thousand trajectories and identify outliers.

  18. The analysis of control trajectories using symbolic and database computing

    NASA Technical Reports Server (NTRS)

    Grossman, Robert

    1995-01-01

    This final report comprises the formal semi-annual status reports for this grant for the periods June 30-December 31, 1993, January 1-June 30, 1994, and June 1-December 31, 1994. The research supported by this grant is broadly concerned with the symbolic computation, mixed numeric-symbolic computation, and database computation of trajectories of dynamical systems, especially control systems. A review of work during the report period covers: trajectories and approximating series, the Cayley algebra of trees, actions of differential operators, geometrically stable integration algorithms, hybrid systems, trajectory stores, PTool, and other activities. A list of publications written during the report period is attached.

  19. Comparing medical knowledge of osteopathic medical trainees in DO and MD programs: a random effect meta-analysis.

    PubMed

    Shen, L; Cavalieri, T; Clearfield, M; Smoley, J

    1997-06-01

    The authors used random effect meta-analysis to synthesize eight mean score differences of the Part III/Level 3 examinations of the national Board of Osteopathic Medical Examiners (NBOME) between osteopathic medical trainees in DO residency programs and osteopathic medical trainees in MD programs. The analysis involved 6001 trainees and all Part III or Level 3 examinations since 1992. The average mean score difference was not significantly different from zero; however, the estimates of true effect sizes of each examination varied substantially. The findings indicate that, overall, medical knowledge of osteopathic trainees in MD and DO residency programs is compatible at the time they took the examinations. However, a large variation of effect size suggests the need for further investigation of the factors other than difference between osteopathic and allopathic training programs.

  20. H5MD: A structured, efficient, and portable file format for molecular data

    NASA Astrophysics Data System (ADS)

    de Buyl, Pierre; Colberg, Peter H.; Höfling, Felix

    2014-06-01

    We propose a new file format named "H5MD" for storing molecular simulation data, such as trajectories of particle positions and velocities, along with thermodynamic observables that are monitored during the course of the simulation. H5MD files are HDF5 (Hierarchical Data Format) files with a specific hierarchy and naming scheme. Thus, H5MD inherits many benefits of HDF5, e.g., structured layout of multi-dimensional datasets, data compression, fast and parallel I/O, and portability across many programming languages and hardware platforms. H5MD files are self-contained, and foster the reproducibility of scientific data and the interchange of data between researchers using different simulation programs and analysis software. In addition, the H5MD specification can serve for other kinds of data (e.g. experimental data) and is extensible to supplemental data, or may be part of an enclosing file structure.

  1. Analysis of Capture Trajectories to the Vicinity of Libration Points

    NASA Technical Reports Server (NTRS)

    Nakamiya, M.; Scheeres, D. J.; Yamakawa, H.; Yoshikawa, M.

    2007-01-01

    Spacecraft capture trajectories to the periodic orbits of the L1 and L2 points in the restricted Hill three-body problem are studied. The specific focus is on transfer to these vicinities from interplanetary trajectories. This application is motivated by future proposals to place "Deep Space ports" at the Earth and Mars L1 or L2 points. These spaceports are considered as candidate gateways for interplanetary transfers in the future. We utilize stable manifolds for capture trajectories to periodic orbits around the libration points. As a result, the cost of capture into a periodic orbit is also reduced relative to direct capture into a parabolic orbit. The way of linking between interplanetary transfer trajectories and the stable manifold is also discussed.

  2. Applications of analysis of dynamic adaptations in parameter trajectories

    PubMed Central

    van Riel, Natal A. W.; Tiemann, Christian A.; Vanlier, Joep; Hilbers, Peter A. J.

    2013-01-01

    Metabolic profiling in combination with pathway-based analyses and computational modelling are becoming increasingly important in clinical and preclinical research. Modelling multi-factorial, progressive diseases requires the integration of molecular data at the metabolome, proteome and transcriptome levels. Also the dynamic interaction of organs and tissues needs to be considered. The processes involved cover time scales that are several orders of magnitude different. We report applications of a computational approach to bridge the scales and different levels of biological detail. Analysis of dynamic adaptations in parameter trajectories (ADAPTs) aims to investigate phenotype transitions during disease development and after a therapeutic intervention. ADAPT is based on a time-dependent evolution of model parameters to describe the dynamics of metabolic adaptations. The progression of metabolic adaptations is predicted by identifying necessary dynamic changes in the model parameters to describe the transition between experimental data obtained during different stages. To get a better understanding of the concept, the ADAPT approach is illustrated in a theoretical study. Its application in research on progressive changes in lipoprotein metabolism is also discussed. PMID:23853705

  3. Trajectory Planning by Preserving Flexibility: Metrics and Analysis

    NASA Technical Reports Server (NTRS)

    Idris, Husni R.; El-Wakil, Tarek; Wing, David J.

    2008-01-01

    In order to support traffic management functions, such as mitigating traffic complexity, ground and airborne systems may benefit from preserving or optimizing trajectory flexibility. To help support this hypothesis trajectory flexibility metrics have been defined in previous work to represent the trajectory robustness and adaptability to the risk of violating safety and traffic management constraints. In this paper these metrics are instantiated in the case of planning a trajectory with the heading degree of freedom. A metric estimation method is presented based on simplifying assumptions, namely discrete time and heading maneuvers. A case is analyzed to demonstrate the estimation method and its use in trajectory planning in a situation involving meeting a time constraint and avoiding loss of separation with nearby traffic. The case involves comparing path-stretch trajectories, in terms of adaptability and robustness along each, deduced from a map of estimated flexibility metrics over the solution space. The case demonstrated anecdotally that preserving flexibility may result in enhancing certain factors that contribute to traffic complexity, namely reducing proximity and confrontation.

  4. Quantitative underwater 3D motion analysis using submerged video cameras: accuracy analysis and trajectory reconstruction.

    PubMed

    Silvatti, Amanda P; Cerveri, Pietro; Telles, Thiago; Dias, Fábio A S; Baroni, Guido; Barros, Ricardo M L

    2013-01-01

    In this study we aim at investigating the applicability of underwater 3D motion capture based on submerged video cameras in terms of 3D accuracy analysis and trajectory reconstruction. Static points with classical direct linear transform (DLT) solution, a moving wand with bundle adjustment and a moving 2D plate with Zhang's method were considered for camera calibration. As an example of the final application, we reconstructed the hand motion trajectories in different swimming styles and qualitatively compared this with Maglischo's model. Four highly trained male swimmers performed butterfly, breaststroke and freestyle tasks. The middle fingertip trajectories of both hands in the underwater phase were considered. The accuracy (mean absolute error) of the two calibration approaches (wand: 0.96 mm - 2D plate: 0.73 mm) was comparable to out of water results and highly superior to the classical DLT results (9.74 mm). Among all the swimmers, the hands' trajectories of the expert swimmer in the style were almost symmetric and in good agreement with Maglischo's model. The kinematic results highlight symmetry or asymmetry between the two hand sides, intra- and inter-subject variability in terms of the motion patterns and agreement or disagreement with the model. The two outcomes, calibration results and trajectory reconstruction, both move towards the quantitative 3D underwater motion analysis.

  5. Particle trajectory computer program for icing analysis of axisymmetric bodies

    NASA Technical Reports Server (NTRS)

    Frost, Walter; Chang, Ho-Pen; Kimble, Kenneth R.

    1982-01-01

    General aviation aircraft and helicopters exposed to an icing environment can accumulate ice resulting in a sharp increase in drag and reduction of maximum lift causing hazardous flight conditions. NASA Lewis Research Center (LeRC) is conducting a program to examine, with the aid of high-speed computer facilities, how the trajectories of particles contribute to the ice accumulation on airfoils and engine inlets. This study, as part of the NASA/LeRC research program, develops a computer program for the calculation of icing particle trajectories and impingement limits relative to axisymmetric bodies in the leeward-windward symmetry plane. The methodology employed in the current particle trajectory calculation is to integrate the governing equations of particle motion in a flow field computed by the Douglas axisymmetric potential flow program. The three-degrees-of-freedom (horizontal, vertical, and pitch) motion of the particle is considered. The particle is assumed to be acted upon by aerodynamic lift and drag forces, gravitational forces, and for nonspherical particles, aerodynamic moments. The particle momentum equation is integrated to determine the particle trajectory. Derivation of the governing equations and the method of their solution are described in Section 2.0. General features, as well as input/output instructions for the particle trajectory computer program, are described in Section 3.0. The details of the computer program are described in Section 4.0. Examples of the calculation of particle trajectories demonstrating application of the trajectory program to given axisymmetric inlet test cases are presented in Section 5.0. For the examples presented, the particles are treated as spherical water droplets. In Section 6.0, limitations of the program relative to excessive computer time and recommendations in this regard are discussed.

  6. [Numerical Analysis of Particle Trajectories in Living Cells under Uncertainty Conditions].

    PubMed

    Pisarev, A S; Rukolaine, S A; Samsonov, A M; Samsonova, M G

    2015-01-01

    We have developed a numerical method for the analysis of particle trajectories in living cells, where a type of movement is determined by Akaike's information criterion, while model parameters are identified by a weighted least squares method. The method is realized in computer software, written in the Java programming language, that enables us to automatically conduct the analysis of trajectories. The method is tested on synthetic trajectories with known parameters, and applied to the analysis of replication complexes in cells, infected with hepatitis C virus. Results of the analysis are in agreement with available data on the movement of biological objects along microtubules. PMID:26591609

  7. Trajectory analysis via a geometric feature space approach

    DOE PAGESBeta

    Rintoul, Mark D.; Wilson, Andrew T.

    2015-10-05

    This study aimed to organize a body of trajectories in order to identify, search for and classify both common and uncommon behaviors among objects such as aircraft and ships. Existing comparison functions such as the Fréchet distance are computationally expensive and yield counterintuitive results in some cases. We propose an approach using feature vectors whose components represent succinctly the salient information in trajectories. These features incorporate basic information such as the total distance traveled and the distance between start/stop points as well as geometric features related to the properties of the convex hull, trajectory curvature and general distance geometry. Additionally,more » these features can generally be mapped easily to behaviors of interest to humans who are searching large databases. Most of these geometric features are invariant under rigid transformation. Furthermore, we demonstrate the use of different subsets of these features to identify trajectories similar to an exemplar, cluster a database of several hundred thousand trajectories and identify outliers.« less

  8. Bulimic symptom onset in young girls: A longitudinal trajectory analysis.

    PubMed

    Pearson, Carolyn M; Smith, Gregory T

    2015-11-01

    To investigate whether there are different patterns of development for binge eating and purging behavior among preadolescent and early adolescent girls, we conducted trajectory analyses of those behaviors in 938 girls across 8 waves of data from the spring of 5th grade (the last year of elementary school) through the spring of 9th grade (the first year of high school). Analyses revealed 4 separate developmental trajectories for binge eating behavior (labeled none, increasing, decreasing, and high steady) and 3 separate developmental trajectories for purging behavior (labeled none, dabble, and increasing). Fifth grade scores on risk factors that were both transdiagnostic (negative affect and negative urgency) and eating disorder specific (expectancies for reinforcement from eating and from thinness) differentiated among the trajectory groups, in some cases before the groups differed in the target behaviors. These findings are the first, to our knowledge, to examine developmental trajectories for bulimic symptom onset in youth as young as elementary school. Clinical implications are discussed. PMID:26595477

  9. Bulimic Symptom Onset in Young Girls: A Longitudinal Trajectory Analysis

    PubMed Central

    Pearson, Carolyn M.; Smith, Gregory T.

    2015-01-01

    To investigate whether there are different patterns of development for binge eating and purging behavior among pre-adolescent and early adolescent girls, we conducted trajectory analyses of those behaviors in 938 girls across eight waves of data from the spring of 5th grade (the last year of elementary school) through the spring of 9th grade (the first year of high school). Analyses revealed four separate developmental trajectories for binge eating behavior (labeled none, increasing, decreasing, and high steady) and three separate developmental trajectories for purging behavior (labeled none, dabble, and increasing). Fifth grade scores on risk factors that were both transdiagnostic (negative affect and negative urgency) and eating disorder specific (expectancies for reinforcement from eating and from thinness) differentiated among the trajectory groups, in some cases before the groups differed in the target behaviors. These findings are the first, to our knowledge, to examine developmental trajectories for bulimic symptom onset in youth as young as elementary school. Clinical implications are discussed. PMID:26595477

  10. mdRNA-Seq analysis of marine microbial communities from the northern Red Sea

    PubMed Central

    Hou, Shengwei; Pfreundt, Ulrike; Miller, Dan; Berman-Frank, Ilana; Hess, Wolfgang R.

    2016-01-01

    Metatranscriptomic differential RNA-Seq (mdRNA-Seq) identifies the suite of active transcriptional start sites at single-nucleotide resolution through enrichment of primary transcript 5′ ends. Here we analyzed the microbial community at 45 m depth at Station A in the northern Gulf of Aqaba, Red Sea, during 500 m deep mixing in February 2012 using mdRNA-Seq and a parallel classical RNA-Seq approach. We identified promoters active in situ for five different pico-planktonic genera (the SAR11 clade of Alphaproteobacteria, Synechococcus of Cyanobacteria, Euryarchaeota, Thaumarchaeota, and Micromonas as an example for picoeukaryotic algae), showing the applicability of this approach to highly diverse microbial communities. 16S rDNA quantification revealed that 24% of the analyzed community were group II marine Euryarchaeota in which we identified a highly abundant non-coding RNA, Tan1, and detected very high expression of genes encoding intrinsically disordered proteins, as well as enzymes for the synthesis of specific B vitamins, extracellular peptidases, carbohydrate-active enzymes, and transport systems. These results highlight previously unknown functions of Euryarchaeota with community-wide relevance. The complementation of metatranscriptomic studies with mdRNA-Seq provides substantial additional information regarding transcriptional start sites, promoter activities, and the identification of non-coding RNAs. PMID:27759035

  11. Structural and Dynamic Analysis on IDPs by Modified AWSEM-MD

    NASA Astrophysics Data System (ADS)

    Wu, Hao; Papoian, Garegin; Papoian Theoretical Biophysics Group Team

    Unlike globular proteins, intrinsically disordered proteins (IDPs) lack both secondary and tertiary structures and can play key roles in various biological processes, including transcriptional regulation, molecular recognition and cellular signaling. These functions can be potentially elucidated by structural heterogeneity of IDPs. Because of their flexibility and disordered nature, it has been difficult to investigate IDPs both computationally and experimentally. In particular, it is desirable to develop coarse-grained, yet accurate models of IDPs, such that simulations exploring sufficient conformational ensembles could be carried out within feasible times. To achieve this goal, we modified the associative memory, water mediated, structure and energy model (AWSEM-MD), which is typically used for folding of globular proteins or binding studies. We tested modified AWSEM-MD on several well-studied IDPs and found the transient secondary structure propensity is consistent with NMR experimental results. The rugged free energy landscapes obtained also show structural heterogeneity of these IDPs. Our proposed extension of AWSEM-MD may allow simulating a wider range of IDPs with high accuracy and computational efficiency.

  12. Aerodynamic, structural, and trajectory analysis of ASTRID-1 vehicle

    SciTech Connect

    Glover, L.S.; Iwaskiw, A.P.; Oursler, M.A.; Perini, L.L.; Schaefer, E.D.

    1994-02-10

    The Johns Hopkins University/Applied Physics Laboratory, JHU/API, in support of Lawrence Livermore National Laboratory, LLNL, is conducting aerodynamic, trajectory, and structural analysis of the Advanced Single Stage Technology Rapid Insertion Demonstration (ASTRID) vehicle, being launched out of Vandenberg Air Force Base (VAFB) in February 1994. The launch is designated ASTRID-1 and is the first in a series of three that will be launched out of VAFB. Launch dates for the next two flights have not been identified, but they are scheduled for the 1994-1995 time frame. The primary goal of the ASTRID-1 flight is to test the LLNL light weight thrust on demand bi-propellant pumped divert propulsion system. The system is employed as the main thrusters for the ASTRID-1 vehicle and uses hydrazine as the mono-propellant. The major conclusions are: (1) The vehicle is very stable throughout flight (stability margin = 17 to 24 inches); (2) The aerodynamic frequency and the roll rate are such that pitch-roll interactions will be small; (3) The high stability margin combined with the high launcher elevation angle makes the vehicle flight path highly sensitive to perturbations during the initial phase of flight, i.e., during the first second of flight after leaving the rail; (4) The major impact dispersions for the test flight are due to winds. The wind impact dispersions are 90% dictated by the low altitude, 0 to 1000 ft., wind conditions; and (5) In order to minimize wind dispersions, head wind conditions are favored for the launch as November VAFB mean tail winds result in land impacts. The ballistic wind methodology can be employed to assess the impact points of winds at the launch site.

  13. Space Trajectory Error Analysis Program (STEAP) for halo orbit missions. Volume 2: Programmer's manual

    NASA Technical Reports Server (NTRS)

    Byrnes, D. V.; Carney, P. C.; Underwood, J. W.; Vogt, E. D.

    1974-01-01

    The six month effort was responsible for the development, test, conversion, and documentation of computer software for the mission analysis of missions to halo orbits about libration points in the earth-sun system. The software consisting of two programs called NOMNAL and ERRAN is part of the Space Trajectories Error Analysis Programs. The program NOMNAL targets a transfer trajectory from earth on a given launch date to a specified halo orbit on a required arrival date. Either impulsive or finite thrust insertion maneuvers into halo orbit are permitted by the program. The transfer trajectory is consistent with a realistic launch profile input by the user. The second program ERRAN conducts error analyses of the targeted transfer trajectory. Measurements including range, doppler, star-planet angles, and apparent planet diameter are processed in a Kalman-Schmidt filter to determine the trajectory knowledge uncertainty.

  14. Design and Analysis of Optimal Ascent Trajectories for Stratospheric Airships

    NASA Astrophysics Data System (ADS)

    Mueller, Joseph Bernard

    Stratospheric airships are lighter-than-air vehicles that have the potential to provide a long-duration airborne presence at altitudes of 18-22 km. Designed to operate on solar power in the calm portion of the lower stratosphere and above all regulated air traffic and cloud cover, these vehicles represent an emerging platform that resides between conventional aircraft and satellites. A particular challenge for airship operation is the planning of ascent trajectories, as the slow moving vehicle must traverse the high wind region of the jet stream. Due to large changes in wind speed and direction across altitude and the susceptibility of airship motion to wind, the trajectory must be carefully planned, preferably optimized, in order to ensure that the desired station be reached within acceptable performance bounds of flight time and energy consumption. This thesis develops optimal ascent trajectories for stratospheric airships, examines the structure and sensitivity of these solutions, and presents a strategy for onboard guidance. Optimal ascent trajectories are developed that utilize wind energy to achieve minimum-time and minimum-energy flights. The airship is represented by a three-dimensional point mass model, and the equations of motion include aerodynamic lift and drag, vectored thrust, added mass effects, and accelerations due to mass flow rate, wind rates, and Earth rotation. A representative wind profile is developed based on historical meteorological data and measurements. Trajectory optimization is performed by first defining an optimal control problem with both terminal and path constraints, then using direct transcription to develop an approximate nonlinear parameter optimization problem of finite dimension. Optimal ascent trajectories are determined using SNOPT for a variety of upwind, downwind, and crosswind launch locations. Results of extensive optimization solutions illustrate definitive patterns in the ascent path for minimum time flights across

  15. Advanced methods of structural and trajectory analysis for transport aircraft

    NASA Technical Reports Server (NTRS)

    Ardema, Mark D.

    1995-01-01

    This report summarizes the efforts in two areas: (1) development of advanced methods of structural weight estimation, and (2) development of advanced methods of trajectory optimization. The majority of the effort was spent in the structural weight area. A draft of 'Analytical Fuselage and Wing Weight Estimation of Transport Aircraft', resulting from this research, is included as an appendix.

  16. The analysis of control trajectories using symbolic and database computing

    NASA Technical Reports Server (NTRS)

    Grossman, Robert

    1991-01-01

    The research broadly concerned the symbolic computation, mixed numeric-symbolic computation, and data base computation of trajectories of dynamical systems, especially control systems. It was determined that trees can be used to compute symbolically series which approximate solutions to differential equations.

  17. Analysis of Geostationary Transfer Trajectories using Lunar Gravity Assist

    NASA Astrophysics Data System (ADS)

    Mezzedimi, Marcello

    extreme importance in space applications. This paper analyses a transfer trajectory using lunar gravity assist, and shows its convenience in terms of total V necessary to be applied on the satellite, compared to the Hohmann transfer and to the bielliptical one, when the inclination of the parking orbit is high. orbit, gravitational perturbations due to the Sun, the Moon and J2, change the orientation of the orbital plane and its inclination. In order to take advantage of this perturbation, it is necessary to achieve a determined value of final RAAN and a not null value of final inclination. parameters of classification have been defined and six types of trajectories found. Among these, one type requires a V largely inferior to the others. starting RAAN has an important physical meaning since it determines the direction of the trajectory and the area in which the fly-by occurs. For different values of the starting RAAN, an optimization is held. A first graph shows which final inclination and RAAN are obtainable, and it is easily interpretable in its physical meaning. A second graph instead, makes a comparison between these final values and the optimal ones considering the perturbations. It is possible to select different "best" trajectories in function of the desired final inclination. two different approaches : sensibility to variations on single starting orbital parameters and sensibility to errors in the starting impulse and time. For each variation it is shown how the final orbital parameters change. We intend to show how an error on the starting impulse affects this optimal trajectory.

  18. Overview of the Development for a Suite of Low-Thrust Trajectory Analysis Tools

    NASA Technical Reports Server (NTRS)

    Kos, Larry D.; Polsgrove, Tara; Hopkins, Randall; Thomas, Dan; Sims, Jon A.

    2006-01-01

    A NASA intercenter team has developed a suite of low-thrust trajectory analysis tools to make a significant improvement in three major facets of low-thrust trajectory and mission analysis. These are: 1) ease of use, 2) ability to more robustly converge to solutions, and 3) higher fidelity modeling and accuracy of results. Due mostly to the short duration of the development, the team concluded that a suite of tools was preferred over having one integrated tool. This tool-suite, their characteristics, and their applicability will be described. Trajectory analysts can read this paper and determine which tool is most appropriate for their problem.

  19. Analysis of the forward-backward trajectory solution for the mixed quantum-classical Liouville equation.

    PubMed

    Hsieh, Chang-Yu; Kapral, Raymond

    2013-04-01

    Mixed quantum-classical methods provide powerful algorithms for the simulation of quantum processes in large and complex systems. The forward-backward trajectory solution of the mixed quantum-classical Liouville equation in the mapping basis [C.-Y. Hsieh and R. Kapral, J. Chem. Phys. 137, 22A507 (2012)] is one such scheme. It simulates the dynamics via the propagation of forward and backward trajectories of quantum coherent state variables, and the propagation of bath trajectories on a mean-field potential determined jointly by the forward and backward trajectories. An analysis of the properties of this solution, numerical tests of its validity and an investigation of its utility for the study of nonadiabtic quantum processes are given. In addition, we present an extension of this approximate solution that allows one to systematically improve the results. This extension, termed the jump forward-backward trajectory solution, is analyzed and tested in detail and its various implementations are discussed. PMID:23574211

  20. Some considerations on velocity vector accuracy in dust trajectory analysis

    NASA Technical Reports Server (NTRS)

    Jackson, A. A.; Zook, Herbert A.

    1994-01-01

    The relative contributions of comets and asteroids to the reservoir of dust in the interplanetary medium is not known. There are direct observations of dust released from comets and there is evidence to associate the IRAS dust bands with possible collisions of asteroids in the main belt. A means towards sorting out the parent sources has been proposed in the establishment of a dust collector in orbit about the Earth. The purpose of such a facility would be to collect not only cosmic dust particles intact but also the state vectors, as they arrive at the detector, the idea being that one may combine analytical laboratory analysis of the physics and chemistry of the captured particles with orbital data in order to help distinguish between bodies and identify parent bodies. The theoretical study of dust particle orbits in the solar system takes on greatly more importance if we use collected trajectory data. The orbital motion of dust when radiation and forces alone are acting is well understood. When gravitational forces due to the planets are included, the motion can become quite complex. In order to characterize the orbits of particles as they crossed the Earth's orbits, a study of the long-time dust orbital evolution was undertaken. We have considered various parameters associated with these dust orbits to see if one may in a general way discriminate between particles evolved from comets and asteroids. We proceed in this study as we have done previously. That is, we considered the dust particles as ideal black bodies, of density 1 gm/cc, spherical, with radii 10-100 microns. Particles of this size are affected by radiation forces, photon pressure, and Poynting-Robertson drag. Account was also taken of solar wind drag, which amounts to about 30 percent of the Poynting-Robertson drag negligible. The gravitational forces due to the planets are included, unlike in our previous study; the planetary orbits are those of true n-body interaction so that the possibility of

  1. Molecular cloning and functional analysis of a UV-B photoreceptor gene, MdUVR8 (UV Resistance Locus 8), from apple.

    PubMed

    Zhao, Cheng; Mao, Ke; You, Chun-Xiang; Zhao, Xian-Yan; Wang, Shu-Hui; Li, Yuan-Yuan; Hao, Yu-Jin

    2016-06-01

    UVR8 (UV Resistance Locus 8) is an ultraviolet-B (UV-B; 280-315nm) light receptor that is involved in regulating many aspects of plant growth and development. UV-B irradiation can increase the development of flower and fruit coloration in many fruit trees, such as grape, pear and apple. Previous investigations of the structure and functions of UVR8 in plants have largely focused on Arabidopsis. Here, we isolated the UVR8 gene from apple (Malus domestica) and analyzed its function in transgenic Arabidopsis. Genomic and protein sequence analysis showed that MdUVR8 shares high similarity with the AtUVR8 protein from Arabidopsis, including the conserved seven-bladed β-propeller, the C27 region, the 3 "GWRHT" motifs and crucial amino-acid residues (14 Trps, 2 Args). A point mutation prediction and three-dimensional structural analysis of MdUVR8 indicated that it has a similar structure to AtUVR8 and that the crucial residues are also important in MdUVR8. In terms of transcript levels, MdUVR8 expression was up-regulated by UV-B light, which suggests that its expression follows a 24-h circadian rhythm. Using heterologous expression of MdUVR8 in both uvr8-1 mutant and wild-type (WT) Arabidopsis, we found that MdUVR8 regulates hypocotyl elongation and gene expression under UV-B light. These data provide functional evidence for a role of MdUVR8 in controlling photomorphogenesis under UV-B light and indicate that the function of UVR8 is conserved between Arabidopsis and apple. Furthermore, we examined the interaction between MdUVR8 and MdCOP1 (constitutive photomorphogenic1) using a yeast two-hybrid assay and a co-immunoprecipitation assay. This interaction provides a direction for investigating the regulatory mechanisms of the UV-B-light pathway in apple.

  2. Analysis of Trajectory Flexibility Preservation Impact on Traffic Complexity

    NASA Technical Reports Server (NTRS)

    Idris, Husni; El-Wakil, Tarek; Wing, David J.

    2009-01-01

    The growing demand for air travel is increasing the need for mitigation of air traffic congestion and complexity problems, which are already at high levels. At the same time new information and automation technologies are enabling the distribution of tasks and decisions from the service providers to the users of the air traffic system, with potential capacity and cost benefits. This distribution of tasks and decisions raises the concern that independent user actions will decrease the predictability and increase the complexity of the traffic system, hence inhibiting and possibly reversing any potential benefits. In answer to this concern, the authors proposed the introduction of decision-making metrics for preserving user trajectory flexibility. The hypothesis is that such metrics will make user actions naturally mitigate traffic complexity. In this paper, the impact of using these metrics on traffic complexity is investigated. The scenarios analyzed include aircraft in en route airspace with each aircraft meeting a required time of arrival in a one-hour time horizon while mitigating the risk of loss of separation with the other aircraft, thus preserving its trajectory flexibility. The experiments showed promising results in that the individual trajectory flexibility preservation induced self-separation and self-organization effects in the overall traffic situation. The effects were quantified using traffic complexity metrics, namely dynamic density indicators, which indicated that using the flexibility metrics reduced aircraft density and the potential of loss of separation.

  3. Trajectory Hunting: Analysis of UARS Measurements showing Rapid Chlorine Activation

    NASA Technical Reports Server (NTRS)

    Danilin, M.Y.; Santee, M. L.; Rodriquez, J. M.; Ko, M. K. W.; Mergenthaler, J. M.; Kumer, J. B.; Tabazadeh, A.

    1998-01-01

    Trajectory hunting (i.e., a technique to find air parcels sampled at least twice over the course of a few days) is applied to analyze Upper Atmosphere Research Satellite (UARS) measurements in conjunction with the AER photochemical box model. In this study, we investigate rapid chlorine activation in the Arctic lower stratosphere on 29 Dec 1992 associated with a polar stratospheric cloud (PSC) event. Six air parcels that have been sampled twice were followed along 5-day trajectories at the 465 K (approximately 46 mb) and 585 K (approximately 22 mb) levels. A detailed sensitivity study with the AER. photochemical box model along these trajectories leads to the following conclusions for the episode considered: (1) model results are in better agreement with UARS measurements at these levels if the UKMO temperature is decreased by at least 1-2 K; (2) the NAT (nitric acid trihydrate) PSC formation scheme produces results in better agreement with observations than the STS (supercooled ternary solution) scheme; (3) the model can explain the UARS measurements at 585 K, but under-estimates the ClO abundance at 465 K, suggesting some inconsistency between the UARS measurements at this level.

  4. Trajectory Hunting: Analysis of UARS Measurements Showing Rapid Chlorine Activation

    NASA Technical Reports Server (NTRS)

    Danilin, M. Y.; Santee, M. L.; Rodriquez, J. M.; Ko, M. K. W.; Mergenthaler, J. M.; Kumer, J. B.; Tabazadeh, A.

    1998-01-01

    Trajectory hunting (i.e., a technique to find air parcels sampled at least twice over the course of a few days) is applied to analyze Upper Atmosphere Research Satellite (UARS) measurements in conjunction with the AER photochemical box model. In this study, we investigate rapid chlorine activation in the Arctic lower stratosphere on 29 Dec. 1992 associated with a polar stratospheric cloud (PSC) event. Six air parcels that have been sampled twice were followed along 5-day trajectories at the 465 K (approx. 46 mb) and 585 K (approxi. 22 mb) levels. A detailed sensitivity study with the AER photochemical box model along these trajectories leads to the following conclusions for the episode considered: 1) model results are in better agreement with UARS measurements at these levels if the U.K. Meteorological Office (UKMO) temperature is decreased by at least 1-2 K; 2) the NAT (nitric acid trihydrate) PSC formation scheme produces results in better agreement with observations than the STS (supercooled ternary solution) scheme; 3) the model can explain the UARS measurements at 585 K, but under-estimates the ClO abundance at 465 K, suggesting some inconsistency between the UARS measurements at this level.

  5. Performance analysis of bullet trajectory estimation: Approach, simulation, and experiments

    SciTech Connect

    Ng, L.C.; Karr, T.J.

    1994-11-08

    This paper describes an approach to estimate a bullet`s trajectory from a time sequence of angles-only observations from a high-speed camera, and analyzes its performance. The technique is based on fitting a ballistic model of a bullet in flight along with unknown source location parameters to a time series of angular observations. The theory is developed to precisely reconstruct, from firing range geometry, the actual bullet trajectory as it appeared on the focal plane array and in real space. A metric for measuring the effective trajectory track error is also presented. Detailed Monte-Carlo simulations assuming different bullet ranges, shot-angles, camera frame rates, and angular noise show that angular track error can be as small as 100 {mu}rad for a 2 mrad/pixel sensor. It is also shown that if actual values of bullet ballistic parameters were available, the bullet s source location variables, and the angles of flight information could also be determined.

  6. In-Situ Analysis of Gradient Trajectories in a Reactive Turbulent Shear Flow

    NASA Astrophysics Data System (ADS)

    Dietzsch, Felix; Gauding, Michael; Hasse, Christian

    2015-11-01

    Most understanding of turbulent fine-scale mixing has been gained from conditional statistics. Conditional statistics are examined along gradient trajectories, which constitute a natural, intrinsic coordinate system of the underlaying scalar field. Statistics along gradient trajectories contain information about the temporal mechanism of turbulent mixing and combustion. Analyzing these statistics is an important step to understand the transient behaviour of the interaction between turbulence and chemistry. The tracking of gradient trajectories is very challenging and has to be conducted in-situ in order to capture the smallest time-scales. The analysis is based on a direct numerical simulation of a turbulent diffusion flame exhibiting extinction and reignition.

  7. Hayabusa Re-Entry: Trajectory Analysis and Observation Mission Design

    NASA Technical Reports Server (NTRS)

    Cassell, Alan M.; Winter, Michael W.; Allen, Gary A.; Grinstead, Jay H.; Antimisiaris, Manny E.; Albers, James; Jenniskens, Peter

    2011-01-01

    On June 13th, 2010, the Hayabusa sample return capsule successfully re-entered Earth s atmosphere over the Woomera Prohibited Area in southern Australia in its quest to return fragments from the asteroid 1998 SF36 Itokawa . The sample return capsule entered at a super-orbital velocity of 12.04 km/sec (inertial), making it the second fastest human-made object to traverse the atmosphere. The NASA DC-8 airborne observatory was utilized as an instrument platform to record the luminous portion of the sample return capsule re-entry (60 sec) with a variety of on-board spectroscopic imaging instruments. The predicted sample return capsule s entry state information at 200 km altitude was propagated through the atmosphere to generate aerothermodynamic and trajectory data used for initial observation flight path design and planning. The DC- 8 flight path was designed by considering safety, optimal sample return capsule viewing geometry and aircraft capabilities in concert with key aerothermodynamic events along the predicted trajectory. Subsequent entry state vector updates provided by the Deep Space Network team at NASA s Jet Propulsion Laboratory were analyzed after the planned trajectory correction maneuvers to further refine the DC-8 observation flight path. Primary and alternate observation flight paths were generated during the mission planning phase which required coordination with Australian authorities for pre-mission approval. The final observation flight path was chosen based upon trade-offs between optimal viewing requirements, ground based observer locations (to facilitate post-flight trajectory reconstruction), predicted weather in the Woomera Prohibited Area and constraints imposed by flight path filing deadlines. To facilitate sample return capsule tracking by the instrument operators, a series of two racetrack flight path patterns were performed prior to the observation leg so the instruments could be pointed towards the region in the star background where

  8. Error Analysis and Trajectory Correction Maneuvers of Lunar Transfer Orbit

    NASA Astrophysics Data System (ADS)

    Zhao, Yu-hui; Hou, Xi-yun; Liu, Lin

    2013-10-01

    For a returnable lunar probe, this paper studies the characteristics of both the Earth-Moon transfer orbit and the return orbit. On the basis of the error propagation matrix, the linear equation to estimate the first midcourse trajectory correction maneuver (TCM) is figured out. Numerical simulations are performed, and the features of error propagation in lunar transfer orbit are given. The advantages, disadvantages, and applications of two TCM strategies are discussed, and the computation of the second TCM of the return orbit is also simulated under the conditions at the reentry time.

  9. Error Analysis and Trajectory Correction Maneuvers of Lunar Transfer Orbit

    NASA Astrophysics Data System (ADS)

    Zhao, Y. H.; Hou, X. Y.; Liu, L.

    2013-05-01

    For the sample return lunar missions and human lunar exploration, this paper studies the characteristics of both the Earth-Moon transfer orbit and the return orbit. On the basis of the error propagation matrix, the linear equation to estimate the first midcourse trajectory correction maneuver (TCM) is figured out. Numerical simulations are performed, and the features of error propagation in lunar transfer orbit are given. The advantages, disadvantages, and applications of two TCM strategies are discussed, and the computation of the second TCM of the return orbit is also simulated under the conditions at the reentry time.

  10. Low-thrust trajectory analysis for the geosynchronous mission

    NASA Technical Reports Server (NTRS)

    Jasper, T. P.

    1973-01-01

    Methodology employed in development of a computer program designed to analyze optimal low-thrust trajectories is described, and application of the program to a Solar Electric Propulsion Stage (SEPS) geosynchronous mission is discussed. To avoid the zero inclination and eccentricity singularities which plague many small-force perturbation techniques, a special set of state variables (equinoctial) is used. Adjoint equations are derived for the minimum time problem and are also free from the singularities. Solutions to the state and adjoint equations are obtained by both orbit averaging and precision numerical integration; an evaluation of these approaches is made.

  11. Immigrant trajectories into homeownership: a temporal analysis of residential assimilation.

    PubMed

    Myers, D; Lee, S W

    1998-01-01

    "This study explores the rate of advancement into homeownership of immigrants, relative to native borns, in Southern California, a principal region of immigrant settlement.... Recent immigrants as well as young native borns are newcomers to the housing market and have lower attainment levels than earlier arrivals or older cohorts. Cohort trajectories are tracked from 1980 to 1990, adjusting for the influence of income, education, English proficiency, and marital status. Asian immigrants achieved extraordinarily high levels of homeownership soon after arrival, whereas Hispanic immigrants demonstrated sustained advancement into homeownership from initially very low levels."

  12. Simulated trajectories error analysis program, version 2. Volume 2: Programmer's manual

    NASA Technical Reports Server (NTRS)

    Vogt, E. D.; Adams, G. L.; Working, M. M.; Ferguson, J. B.; Bynum, M. R.

    1971-01-01

    A series of three computer programs for the mathematical analysis of navigation and guidance of lunar and interplanetary trajectories was developed. All three programs require the integration of n-body trajectories for both interplanetary and lunar missions. The virutal mass technique is used in all three programs. The user's manual contains the information necessary to operate the programs. The input and output quantities of the programs are described. Sample cases are given and discussed.

  13. Analysis of various two synodic period Earth-Mars cycler trajectories

    NASA Technical Reports Server (NTRS)

    Byrnes, D. V.; McConaghy, T. T.; Longuski, J. M.

    2002-01-01

    Trajectories that regularly encounter Earth and Mars but use small or no propulsive maneuvers are known as cycler trajectories, or cyclers. For cyclers that repeat after two Earth-Mars synodic periods, several variations are possible. A detailed investigation is presented of a simple two synodic period cycler, along with several promising variations using combinations of one year and half-year phasing orbits. Analysis is included for both the circular co-planar model and with actual Earth and Mars ephemerides.

  14. Orbiter Trajectory Analysis for a Two-Stage Reusable Launch Vehicle

    NASA Technical Reports Server (NTRS)

    Cowling, Adam L.

    2011-01-01

    Trajectory analysis performed on NASA's reference two-stage-to-orbit launch vehicle upper stage will be presented. The work was completed in support of the Hypersonics Multidisciplinary Analysis and Optimization effort for the NASA-Air Force Joint System Study. Three degree-of-freedom (3-DOF) untrimmed trajectory analysis was performed for the orbiter ascent, closure and re-entry. An iterative closure process resulted in a 333,000 lb initial mass for the orbiter. The re-entry trajectory satisfied heating constraints for all payload out cases and met the constraints with reduced margins for payload in cases. Abort trajectories for engine out at staging, engine out during ascent, and failure to circularize in orbit, gave insight to the robustness of the orbiter. A trimmed ascent trajectory defined an engine gimbal location and the body flap angle best suited for maximizing injected mass. A trimmed re-entry trajectory revealed a need to update the trim routine to accommodate full flap aerodynamic data.

  15. Monte Carlo Analysis as a Trajectory Design Driver for the TESS Mission

    NASA Technical Reports Server (NTRS)

    Nickel, Craig; Lebois, Ryan; Lutz, Stephen; Dichmann, Donald; Parker, Joel

    2016-01-01

    The Transiting Exoplanet Survey Satellite (TESS) will be injected into a highly eccentric Earth orbit and fly 3.5 phasing loops followed by a lunar flyby to enter a mission orbit with lunar 2:1 resonance. Through the phasing loops and mission orbit, the trajectory is significantly affected by lunar and solar gravity. We have developed a trajectory design to achieve the mission orbit and meet mission constraints, including eclipse avoidance and a 30-year geostationary orbit avoidance requirement. A parallelized Monte Carlo simulation was performed to validate the trajectory after injecting common perturbations, including launch dispersions, orbit determination errors, and maneuver execution errors. The Monte Carlo analysis helped identify mission risks and is used in the trajectory selection process.

  16. Preliminary analysis on the MD-4® plasma-sprayed titanium acetabular component☆

    PubMed Central

    de Araújo Loures, Elmano; Simoni, Leandro Furtado; Leite, Isabel Cristina Gonçalves; Loures, Daniel Naya; Loures, Clarice Naya

    2015-01-01

    Objectives To evaluate the short-term performance of a type of implant manufactured in Brazil. Methods This study analyzed a cohort of 60 patients who underwent implantation of MD-4® acetabular components during primary hip arthroplasty procedures performed between January 1, 2010, and August 1, 2012. The patients were studied retrospectively with regard to clinical behavior, stability and radiological osseointegration. The patients were followed up for a minimum of 12 months and a maximum of 42 months (mean: 27) and were evaluated by means of the Harris Hip Score, SF-36 questionnaire and serial conventional radiographs. Results All the components were radiologically stable, without evidence of migration or progressive radiolucency lines. On average, the Harris Hip Score evolved from 36.1 to 92.1 (p < 0.001) and the SF-36 showed significant increases in all its domains (p < 0.001). No differences were observed among patients with osteoarthrosis, osteonecrosis, hip dysplasia or other conditions. Conclusions The short-term results showed clinical and radiological signs of stability and osseointegration of the implants, which may represent a predictive factor regarding medium-term survival of this acetabular component. PMID:26229918

  17. A Comparative Analysis of Two Full-Scale MD-500 Helicopter Crash Tests

    NASA Technical Reports Server (NTRS)

    Littell, Justin D.

    2011-01-01

    Two full scale crash tests were conducted on a small MD-500 helicopter at NASA Langley Research Center fs Landing and Impact Research Facility. One of the objectives of this test series was to compare airframe impact response and occupant injury data between a test which outfitted the airframe with an external composite passive energy absorbing honeycomb and a test which had no energy absorbing features. In both tests, the nominal impact velocity conditions were 7.92 m/sec (26 ft/sec) vertical and 12.2 m/sec (40 ft/sec) horizontal, and the test article weighed approximately 1315 kg (2900 lbs). Airframe instrumentation included accelerometers and strain gages. Four Anthropomorphic Test Devices were also onboard; three of which were standard Hybrid II and III, while the fourth was a specialized torso. The test which contained the energy absorbing honeycomb showed vertical impact acceleration loads of approximately 15 g, low risk for occupant injury probability, and minimal airframe damage. These results were contrasted with the test conducted without the energy absorbing honeycomb. The test results showed airframe accelerations of approximately 40 g in the vertical direction, high risk for injury probability in the occupants, and substantial airframe damage.

  18. Regional Influences of Marcellus Shale Natural Gas Activity: Back-trajectory Analysis of Baltimore/Washington Ethane Concentrations

    NASA Astrophysics Data System (ADS)

    Vinciguerra, T.; Chittams, A.; Dadzie, J.; Deskins, T.; Goncalves, V.; M'Bagui Matsanga, C.; Zakaria, R.; Ehrman, S.; Dickerson, R. R.

    2015-12-01

    Over the past several years, the combined utilization of hydraulic fracturing and horizontal drilling has led to a rapid increase in natural gas production, especially from the Marcellus Shale. To explore the impact of this activity downwind on regions with no natural gas production, the Hybrid Single Particle Lagrangian Integrated Trajectory (HYSPLIT) Model was used to generate 48-hour back-trajectories for summer, daytime hours from the years 2007-2014 in the Baltimore, MD and Washington, D.C. areas where hourly ethane measurements are available from Photochemical Assessment Monitoring Stations (PAMS). For each of the years investigated, unconventional well counts were obtained for counties in the surrounding states of Pennsylvania, Ohio, West Virginia, and Virginia, and counties exceeding a threshold of 0.05 wells/km2 were designated as counties with a high density of wells. The back-trajectories for each year were separated into two groups: those which passed through counties containing a high density of wells, and those which did not. Back-trajectories passing through high-density counties were further screened by applying a height criterion where trajectories beyond 10% above the mixing layer were excluded. Preliminary results indicate that air parcels with back-trajectories passing within the boundary layer of counties with a high density of unconventional natural gas wells correspond to significantly greater concentrations of observed ethane at these downwind monitors.

  19. Trajectory analysis of a low lift/drag aeroassisted orbit transfer vehicle

    NASA Astrophysics Data System (ADS)

    Braun, Robert D.

    This paper presents the results of an undergraduate thesis pertaining to four significant aspects of an aeroassisted orbit transfer vehicle trajectory analysis. The orbital trajectories were simulated by utilizing the computer optimization program POST at the NASA-Langley Research Center. This optimization was based on the spacecraft's known properties and constraints, in particular the vehicle's heating-rate restriction. Through this analysis, the influence of both aerodynamic and astrodynamic parameters on the vehicle's flight path are determined. Additionally, various means of producing the required orbital transfer energy decrement, as well as the tradeoff between the spacecraft's time-of-flight and propellant expended, are studied.

  20. Trajectory Correction and Locomotion Analysis of a Hexapod Walking Robot with Semi-Round Rigid Feet.

    PubMed

    Zhu, Yaguang; Jin, Bo; Wu, Yongsheng; Guo, Tong; Zhao, Xiangmo

    2016-08-31

    Aimed at solving the misplaced body trajectory problem caused by the rolling of semi-round rigid feet when a robot is walking, a legged kinematic trajectory correction methodology based on the Least Squares Support Vector Machine (LS-SVM) is proposed. The concept of ideal foothold is put forward for the three-dimensional kinematic model modification of a robot leg, and the deviation value between the ideal foothold and real foothold is analyzed. The forward/inverse kinematic solutions between the ideal foothold and joint angular vectors are formulated and the problem of direct/inverse kinematic nonlinear mapping is solved by using the LS-SVM. Compared with the previous approximation method, this correction methodology has better accuracy and faster calculation speed with regards to inverse kinematics solutions. Experiments on a leg platform and a hexapod walking robot are conducted with multi-sensors for the analysis of foot tip trajectory, base joint vibration, contact force impact, direction deviation, and power consumption, respectively. The comparative analysis shows that the trajectory correction methodology can effectively correct the joint trajectory, thus eliminating the contact force influence of semi-round rigid feet, significantly improving the locomotion of the walking robot and reducing the total power consumption of the system.

  1. Trajectory Correction and Locomotion Analysis of a Hexapod Walking Robot with Semi-Round Rigid Feet.

    PubMed

    Zhu, Yaguang; Jin, Bo; Wu, Yongsheng; Guo, Tong; Zhao, Xiangmo

    2016-01-01

    Aimed at solving the misplaced body trajectory problem caused by the rolling of semi-round rigid feet when a robot is walking, a legged kinematic trajectory correction methodology based on the Least Squares Support Vector Machine (LS-SVM) is proposed. The concept of ideal foothold is put forward for the three-dimensional kinematic model modification of a robot leg, and the deviation value between the ideal foothold and real foothold is analyzed. The forward/inverse kinematic solutions between the ideal foothold and joint angular vectors are formulated and the problem of direct/inverse kinematic nonlinear mapping is solved by using the LS-SVM. Compared with the previous approximation method, this correction methodology has better accuracy and faster calculation speed with regards to inverse kinematics solutions. Experiments on a leg platform and a hexapod walking robot are conducted with multi-sensors for the analysis of foot tip trajectory, base joint vibration, contact force impact, direction deviation, and power consumption, respectively. The comparative analysis shows that the trajectory correction methodology can effectively correct the joint trajectory, thus eliminating the contact force influence of semi-round rigid feet, significantly improving the locomotion of the walking robot and reducing the total power consumption of the system. PMID:27589766

  2. Trajectory Correction and Locomotion Analysis of a Hexapod Walking Robot with Semi-Round Rigid Feet

    PubMed Central

    Zhu, Yaguang; Jin, Bo; Wu, Yongsheng; Guo, Tong; Zhao, Xiangmo

    2016-01-01

    Aimed at solving the misplaced body trajectory problem caused by the rolling of semi-round rigid feet when a robot is walking, a legged kinematic trajectory correction methodology based on the Least Squares Support Vector Machine (LS-SVM) is proposed. The concept of ideal foothold is put forward for the three-dimensional kinematic model modification of a robot leg, and the deviation value between the ideal foothold and real foothold is analyzed. The forward/inverse kinematic solutions between the ideal foothold and joint angular vectors are formulated and the problem of direct/inverse kinematic nonlinear mapping is solved by using the LS-SVM. Compared with the previous approximation method, this correction methodology has better accuracy and faster calculation speed with regards to inverse kinematics solutions. Experiments on a leg platform and a hexapod walking robot are conducted with multi-sensors for the analysis of foot tip trajectory, base joint vibration, contact force impact, direction deviation, and power consumption, respectively. The comparative analysis shows that the trajectory correction methodology can effectively correct the joint trajectory, thus eliminating the contact force influence of semi-round rigid feet, significantly improving the locomotion of the walking robot and reducing the total power consumption of the system. PMID:27589766

  3. Molecular cloning and functional analysis of a UV-B photoreceptor gene, MdUVR8 (UV Resistance Locus 8), from apple.

    PubMed

    Zhao, Cheng; Mao, Ke; You, Chun-Xiang; Zhao, Xian-Yan; Wang, Shu-Hui; Li, Yuan-Yuan; Hao, Yu-Jin

    2016-06-01

    UVR8 (UV Resistance Locus 8) is an ultraviolet-B (UV-B; 280-315nm) light receptor that is involved in regulating many aspects of plant growth and development. UV-B irradiation can increase the development of flower and fruit coloration in many fruit trees, such as grape, pear and apple. Previous investigations of the structure and functions of UVR8 in plants have largely focused on Arabidopsis. Here, we isolated the UVR8 gene from apple (Malus domestica) and analyzed its function in transgenic Arabidopsis. Genomic and protein sequence analysis showed that MdUVR8 shares high similarity with the AtUVR8 protein from Arabidopsis, including the conserved seven-bladed β-propeller, the C27 region, the 3 "GWRHT" motifs and crucial amino-acid residues (14 Trps, 2 Args). A point mutation prediction and three-dimensional structural analysis of MdUVR8 indicated that it has a similar structure to AtUVR8 and that the crucial residues are also important in MdUVR8. In terms of transcript levels, MdUVR8 expression was up-regulated by UV-B light, which suggests that its expression follows a 24-h circadian rhythm. Using heterologous expression of MdUVR8 in both uvr8-1 mutant and wild-type (WT) Arabidopsis, we found that MdUVR8 regulates hypocotyl elongation and gene expression under UV-B light. These data provide functional evidence for a role of MdUVR8 in controlling photomorphogenesis under UV-B light and indicate that the function of UVR8 is conserved between Arabidopsis and apple. Furthermore, we examined the interaction between MdUVR8 and MdCOP1 (constitutive photomorphogenic1) using a yeast two-hybrid assay and a co-immunoprecipitation assay. This interaction provides a direction for investigating the regulatory mechanisms of the UV-B-light pathway in apple. PMID:27095405

  4. Trajectory analysis of acid deposition data from the new jersey pine barrens

    NASA Astrophysics Data System (ADS)

    Budd, William W.

    This research provides an example of the application of a simple method for evaluating regional interrelationships using air parcel trajectory analysis. An assessment of trajectories associated with storms affecting McDonald's Branch watershed (39°50'N, 74°30'W) is presented. A simple classification system is used to examine regional contributions of acid precursors. The results of the work suggest that major regional sources of acid precursor emissions dominated precipitation acidity for the Pine Barrens region from 1978 to 1981. An incremental approach to acid precipitation policy is suggested.

  5. Action Recognition Using Rate-Invariant Analysis of Skeletal Shape Trajectories.

    PubMed

    Ben Amor, Boulbaba; Su, Jingyong; Srivastava, Anuj

    2016-01-01

    We study the problem of classifying actions of human subjects using depth movies generated by Kinect or other depth sensors. Representing human body as dynamical skeletons, we study the evolution of their (skeletons’) shapes as trajectories on Kendall’s shape manifold. The action data is typically corrupted by large variability in execution rates within and across subjects and, thus, causing major problems in statistical analyses. To address that issue, we adopt a recently-developed framework of Su et al. [1], [2] to this problem domain. Here, the variable execution rates correspond to re-parameterizations of trajectories, and one uses a parameterization-invariant metric for aligning, comparing, averaging, and modeling trajectories. This is based on a combination of transported square-root vector fields (TSRVFs) of trajectories and the standard Euclidean norm, that allows computational efficiency. We develop a comprehensive suite of computational tools for this application domain: smoothing and denoising skeleton trajectories using median filtering, up- and down-sampling actions in time domain, simultaneous temporal-registration of multiple actions, and extracting invertible Euclidean representations of actions. Due to invertibility these Euclidean representations allow both discriminative and generative models for statistical analysis. For instance, they can be used in a SVM-based classification of original actions, as demonstrated here using MSR Action-3D, MSR Daily Activity and 3D Action Pairs datasets. Using only the skeletal information, we achieve state-of-the-art classification results on these datasets. PMID:27030844

  6. Application of independent component analysis in target trajectory prediction based on moving platform

    NASA Astrophysics Data System (ADS)

    Deng, Chao; Mao, Yao; Gan, Xun; Tian, Jing

    2015-10-01

    In Electro-Optical tracking systems, compound control is used to keep high-precision tracking of fast targets by predicting the trajectory of the target. Traditional ground based Electro-Optical tracking system uses encoder data and target missing quantity read from image sensors to achieve the target trajectory by using prediction filtering techniques. Compared with the traditional ground based systems, relative angle between the tracking system and the ground cannot be read directly from encoder data in an Electro -Optical tracking system based on moving platform. Thus the combination of inertial sensors' data and target missing quantity is required to composite the trajectory of targets. However, the output of the inertial sensors contains not only the information of the target's motion, but also the residual error of vibration suppression. The existence of vibration suppression residual error affects the trajectory prediction accuracy, thereby reducing compensation precision and the stability of the compound control system. Independent component analysis (ICA) method that can effectively separate the source signals from the measurement signals is introduced to target trajectory prediction field in this paper. An experimental system based on the method is built by settling a small dual-axis disturbance platform, which is taken as the stable platform, on a large dual-axis disturbance platform, which is used to simulate the motion of the moving platform. The result shows that the vibration residual is separated and subtracted from the combined motion data. The target motion is therefore obtained and the feasibility of the method is proved .

  7. Action Recognition Using Rate-Invariant Analysis of Skeletal Shape Trajectories.

    PubMed

    Ben Amor, Boulbaba; Su, Jingyong; Srivastava, Anuj

    2016-01-01

    We study the problem of classifying actions of human subjects using depth movies generated by Kinect or other depth sensors. Representing human body as dynamical skeletons, we study the evolution of their (skeletons’) shapes as trajectories on Kendall’s shape manifold. The action data is typically corrupted by large variability in execution rates within and across subjects and, thus, causing major problems in statistical analyses. To address that issue, we adopt a recently-developed framework of Su et al. [1], [2] to this problem domain. Here, the variable execution rates correspond to re-parameterizations of trajectories, and one uses a parameterization-invariant metric for aligning, comparing, averaging, and modeling trajectories. This is based on a combination of transported square-root vector fields (TSRVFs) of trajectories and the standard Euclidean norm, that allows computational efficiency. We develop a comprehensive suite of computational tools for this application domain: smoothing and denoising skeleton trajectories using median filtering, up- and down-sampling actions in time domain, simultaneous temporal-registration of multiple actions, and extracting invertible Euclidean representations of actions. Due to invertibility these Euclidean representations allow both discriminative and generative models for statistical analysis. For instance, they can be used in a SVM-based classification of original actions, as demonstrated here using MSR Action-3D, MSR Daily Activity and 3D Action Pairs datasets. Using only the skeletal information, we achieve state-of-the-art classification results on these datasets.

  8. Separating the Air Quality Impact of a Major Highway and Nearby Sources by Nonparametric Trajectory Analysis

    EPA Science Inventory

    Nonparametric Trajectory Analysis (NTA), a receptor-oriented model, was used to assess the impact of local sources of air pollution at monitoring sites located adjacent to highway I-15 in Las Vegas, NV. Measurements of black carbon, carbon monoxide, nitrogen oxides, and sulfur di...

  9. Stereoscopic Analysis of STEREO/SECCHI Data for CME Trajectory Determination

    NASA Technical Reports Server (NTRS)

    Liewer, P. C.; Hall, J. R.; Howard, R. A.; DeJong, E. M.; Thompson, W. T.; Thernisten, A.

    2010-01-01

    The Sun Earth Connection Coronal and Heliospheric Investigation (SECCHI) coronagraphs on the twin Solar TErrestrial RElations Observatory (STEREO) spacecraft provide simultaneous views of the corona and coronal mass ejections from two view points. Here, we analyze simultaneous image pairs using the technique of tie-pointing and triangulation (T&T) to determine the three-dimensional trajectory of seven coronal mass ejections (CMEs). The bright leading edge of a CME seen in coronagraph images results from line-of-sight integration through the CME front; the two STEREO coronagraphs see different apparent leading edges, leading to a systematic error in its three-dimensional reconstruction. We analyze this systematic error using a simple geometric model of a CME front. We validate the technique and analysis by comparing T&T trajectory determinations for seven CMEs with trajectories determined by Thernisien et al. (2009) using a forward modeling technique not susceptible to this systematic effect.

  10. Mercury Emission Inventory Analysis in Wisconsin using Inverse Modeling and Meso-scale Particle Trajectories

    NASA Astrophysics Data System (ADS)

    de Foy, B.; Schauer, J. J.

    2011-12-01

    Speciated measurements of mercury concentrations were performed at a rural and urban site in Wisconsin for year-long time periods with an hourly time resolution. These are used to evaluate existing emission inventories with an inverse method based on hourly back-trajectories. WRF-Flexpart reverse particle trajectories are calculated at the local to regional scale for every data point in the time series. In addition, we perform forward Eulerian simulations of biomass burning impacts at the receptor site. A least-squares inversion on both the forward impacts and the gridded back-trajectories is used to identify potential source locations and emission factors. Error analysis is performed using bootstrapping on the input grids and time series. Results suggest a combination of impacts from local, regional and biomass burning sources.

  11. ProtoMD: A prototyping toolkit for multiscale molecular dynamics

    NASA Astrophysics Data System (ADS)

    Somogyi, Endre; Mansour, Andrew Abi; Ortoleva, Peter J.

    2016-05-01

    ProtoMD is a toolkit that facilitates the development of algorithms for multiscale molecular dynamics (MD) simulations. It is designed for multiscale methods which capture the dynamic transfer of information across multiple spatial scales, such as the atomic to the mesoscopic scale, via coevolving microscopic and coarse-grained (CG) variables. ProtoMD can be also be used to calibrate parameters needed in traditional CG-MD methods. The toolkit integrates 'GROMACS wrapper' to initiate MD simulations, and 'MDAnalysis' to analyze and manipulate trajectory files. It facilitates experimentation with a spectrum of coarse-grained variables, prototyping rare events (such as chemical reactions), or simulating nanocharacterization experiments such as terahertz spectroscopy, AFM, nanopore, and time-of-flight mass spectroscopy. ProtoMD is written in python and is freely available under the GNU General Public License from github.com/CTCNano/proto_md.

  12. Substance Use and Abuse Trajectories across Adolescence: A Latent Trajectory Analysis of a Community-Recruited Sample of Girls

    ERIC Educational Resources Information Center

    Marti, C. Nathan; Stice, Eric; Springer, David W.

    2010-01-01

    We used data from a school-based study of 496 adolescent girls to identify qualitatively distinct substance use and substance abuse developmental trajectory groups and tested whether the problematic groups differed from the non-problematic groups on baseline and outcome validation variables. Results identified four substance use groups (late…

  13. Space Trajectories Error Analysis (STEAP) Programs. Volume 1: Analytic manual, update

    NASA Technical Reports Server (NTRS)

    1971-01-01

    Manual revisions are presented for the modified and expanded STEAP series. The STEAP 2 is composed of three independent but related programs: NOMAL for the generation of n-body nominal trajectories performing a number of deterministic guidance events; ERRAN for the linear error analysis and generalized covariance analysis along specific targeted trajectories; and SIMUL for testing the mathematical models used in the navigation and guidance process. The analytic manual provides general problem description, formulation, and solution and the detailed analysis of subroutines. The programmers' manual gives descriptions of the overall structure of the programs as well as the computational flow and analysis of the individual subroutines. The user's manual provides information on the input and output quantities of the programs. These are updates to N69-36472 and N69-36473.

  14. Trajectory analysis for solar electric propulsion stage /SEPS/ planetary missions

    NASA Technical Reports Server (NTRS)

    Dazzo, E. J.; Nagorski, R. P.

    1973-01-01

    This paper summarizes a portion of the planetary mission analysis results of past and present studies conducted by Rockwell International for NASA-MSFC (Contract NAS8-27360) dealing with the feasibility of a Solar Electric Propulsion Stage (SEPS). The SEPS is envisioned as an upper stage of a transportation system capable of delivering either separable payload spacecraft or attached science packages to various planetary targets. The purpose of the paper is to demonstrate that, from a payload performance capability standpoint, a common SEP Stage can deliver various payloads to a host of planetary targets including inner and outer planets, asteroids, and comets.

  15. Trajectory-based heating analysis for the European Space Agency/Rosetta Earth Return Vehicle

    NASA Technical Reports Server (NTRS)

    Henline, William D.; Tauber, Michael E.

    1994-01-01

    A coupled, trajectory-based flowfield and material thermal-response analysis is presented for the European Space Agency proposed Rosetta comet nucleus sample return vehicle. The probe returns to earth along a hyperbolic trajectory with an entry velocity of 16.5 km/s and requires an ablative heat shield on the forebody. Combined radiative and convective ablating flowfield analyses were performed for the significant heating portion of the shallow ballistic entry trajectory. Both quasisteady ablation and fully transient analyses were performed for a heat shield composed of carbon-phenolic ablative material. Quasisteady analysis was performed using the two-dimensional axisymmetric codes RASLE and BLIMPK. Transient computational results were obtained from the one-dimensional ablation/conduction code CMA. Results are presented for heating, temperature, and ablation rate distributions over the probe forebody for various trajectory points. Comparison of transient and quasisteady results indicates that, for the heating pulse encountered by this probe, the quasisteady approach is conservative from the standpoint of predicted surface recession.

  16. Northwest Trajectory Analysis Capability: A Platform for Enhancing Computational Biophysics Analysis

    SciTech Connect

    Peterson, Elena S.; Stephan, Eric G.; Corrigan, Abigail L.; Lins, Roberto D.; Soares, Thereza A.; Scarberry, Randall E.; Rose, Stuart J.; Williams, Leigh K.; Lai, Canhai; Critchlow, Terence J.; Straatsma, TP

    2008-07-30

    As computational resources continue to increase, the ability of computational simulations to effectively complement, and in some cases replace, experimentation in scientific exploration also increases. Today, large-scale simulations are recognized as an effective tool for scientific exploration in many disciplines including chemistry and biology. A natural side effect of this trend has been the need for an increasingly complex analytical environment. In this paper, we describe Northwest Trajectory Analysis Capability (NTRAC), an analytical software suite developed to enhance the efficiency of computational biophysics analyses. Our strategy is to layer higher-level services and introduce improved tools within the user’s familiar environment without preventing researchers from using traditional tools and methods. Our desire is to share these experiences to serve as an example for effectively analyzing data intensive large scale simulation data.

  17. Crew Exploration Vehicle Ascent Abort Trajectory Analysis and Optimization

    NASA Technical Reports Server (NTRS)

    Falck, Robert D.; Gefert, Leon P.

    2007-01-01

    The Orion Crew Exploration Vehicle is the first crewed capsule design to be developed by NASA since Project Apollo. Unlike Apollo, however, the CEV is being designed for service in both Lunar and International Space Station missions. Ascent aborts pose some issues that were not present for Apollo, due to its launch azimuth, nor Space Shuttle, due to its cross range capability. The requirement that a North Atlantic splashdown following an abort be avoidable, in conjunction with the requirement for overlapping abort modes to maximize crew survivability, drives the thrust level of the service module main engine. This paper summarizes 3DOF analysis conducted by NASA to aid in the determination of the appropriate propulsion system for the service module, and the appropriate propellant loading for ISS missions such that crew survivability is maximized.

  18. Mars Exploration Rover Six-Degree-Of-Freedom Entry Trajectory Analysis

    NASA Technical Reports Server (NTRS)

    Desai, Prasun N.; Schoenenberger, Mark; Cheatwood, F. M.

    2003-01-01

    The Mars Exploration Rover mission will be the next opportunity for surface exploration of Mars in January 2004. Two rovers will be delivered to the surface of Mars using the same entry, descent, and landing scenario that was developed and successfully implemented by Mars Pathfinder. This investigation describes the trajectory analysis that was performed for the hypersonic portion of the MER entry. In this analysis, a six-degree-of-freedom trajectory simulation of the entry is performed to determine the entry characteristics of the capsules. In addition, a Monte Carlo analysis is also performed to statistically assess the robustness of the entry design to off-nominal conditions to assure that all entry requirements are satisfied. The results show that the attitude at peak heating and parachute deployment are well within entry limits. In addition, the parachute deployment dynamics pressure and Mach number are also well within the design requirements.

  19. Trajectory and Aeroheating Environment Development and Sensitivity Analysis for Capsule-shaped Vehicles

    NASA Technical Reports Server (NTRS)

    Robinson, Jeffrey S.; Wurster, Kathryn E.

    2006-01-01

    Recently, NASA's Exploration Systems Research and Technology Project funded several tasks that endeavored to develop and evaluate various thermal protection systems and high temperature material concepts for potential use on the crew exploration vehicle. In support of these tasks, NASA Langley's Vehicle Analysis Branch generated trajectory information and associated aeroheating environments for more than 60 unique entry cases. Using the Apollo Command Module as the baseline entry system because of its relevance to the favored crew exploration vehicle design, trajectories for a range of lunar and Mars return, direct and aerocapture Earth-entry scenarios were developed. For direct entry, a matrix of cases was created that reflects reasonably expected minimum and maximum values of vehicle ballistic coefficient, inertial velocity at entry interface, and inertial flight path angle at entry interface. For aerocapture, trajectories were generated for a range of values of initial velocity and ballistic coefficient that, when combined with proper initial flight path angles, resulted in achieving a low Earth orbit either by employing a full lift vector up or full lift vector down attitude. For each trajectory generated, aeroheating environments were generated which were intended to bound the thermal protection system requirements for likely crew exploration vehicle concepts. The trades examined clearly pointed to a range of missions / concepts that will require ablative systems as well as a range for which reusable systems may be feasible. In addition, the results clearly indicated those entry conditions and modes suitable for manned flight, considering vehicle deceleration levels experienced during entry. This paper presents an overview of the analysis performed, including the assumptions, methods, and general approach used, as well as a summary of the trajectory and aerothermal environment information that was generated.

  20. Spatial variability of hailfalls in France: an analysis of air mass retro-trajectories

    NASA Astrophysics Data System (ADS)

    Hermida, Lucía; Merino, Andrés; Sánchez, José Luis; Berthet, Claude; Dessens, Jean; López, Laura; Fernández-González, Sergio; Gascón, Estíbaliz; García-Ortega, Eduardo

    2014-05-01

    Hail is the main meteorological risk in south-west France, with the strongest hailfalls being concentrated in just a few days. Specifically, this phenomenon occurs most often and with the greatest severity in the Midi-Pyrénées area. Previous studies have revealed the high spatial variability of hailfall in this part of France, even leading to different characteristics being recorded on hailpads that were relatively close together. For this reason, an analysis of the air mass trajectories was carried out at ground level and at altitude, which subsequently led to the formation of the hail recorded by these hailpads. It is already known that in the study zone, the trajectories of the storms usually stretch for long distances and are oriented towards the east, leading to hailstones with diameters in excess of 3 cm, and without any change in direction above 3 km. We analysed different days with hail precipitation where there was at least one stone with a diameter of 3 cm or larger. Using the simulations from these days, an analysis of the backward trajectories of the air masses was carried out. We used the HYSPLIT (Hybrid Single Particle Lagrangian Integrated Trajectory Model) to determine the origin of the air masses, and tracked them toward each of the hailpads that were hit during the day studied. The height of the final points was the height of the impacted hailpads. Similarly, the backward trajectories for different heights were also established. Finally, the results show how storms that affect neighbouring hailpads come from very different air masses; and provide a deeper understanding of the high variability that affects the characteristics of hailfalls. Acknowledgements The authors would like to thank the Regional Government of Castile-León for its financial support through the project LE220A11-2. This study was supported by the following grants: GRANIMETRO (CGL2010-15930); MICROMETEO (IPT-310000-2010-22).

  1. Steric effects on intramolecular reactivity in cyclic dipeptides: Conformational analysis validated by a combined MD/DFT approach

    NASA Astrophysics Data System (ADS)

    Lewandowska, A.; Carmichael, I.; Hörner, G.; Hug, G. L.; Marciniak, B.

    2011-08-01

    The present Molecular Dynamics (MD) simulation study addresses the geometric requirements of close-contact formation in short peptides. This process, that is probed herein by intramolecular H-atom transfer, initiated by triplet-excited ketones, demands close contact between the H-donating and H-accepting moieties. Thus, any deduction about the compound's reactivity based just on MD simulations, requires independent verification of the computed conformational preferences. In this study, a procedure was developed using diketopiperazine-linked benzophenone/tyrosine dyads. Specifically, it involves a comparison of the dyads' experimental 3J(H α-H β(a/b)) spin-spin coupling constants with the theoretical values obtained by weighting DFT-computed spin-spin coupling constants with the MD-computed probability distributions for the dyads' configurations.

  2. Design of cycler trajectories and analysis of solar influences on radioactive decay rates during space missions

    NASA Astrophysics Data System (ADS)

    Rogers, Blake A.

    investigated to determine if they can be used to find new cycler trajectories, as well as those previously discovered. First order approximations to the relative motion equations are unfruitful for Earth-Mars cyclers because the variation in radial distance from the Sun is too large. However, using optimization techniques, cycling trajectories are found for the Earth-Mars, Earth-Ceres, and Mars-Ceres systems. Experiments showing a seasonal variation of the nuclear decay rates of a number of different nuclei and decay anomalies--- apparently related to solar flares and solar rotation--- have suggested that the Sun may somehow be influencing nuclear decay processes. Recently, there have been searches for such an effect in 238Pu nuclei contained in the radioisotope thermoelectric generators on board the Cassini spacecraft. In this work, that analysis is modified and extended to obtain constraints on anomalous decays of 238Pu over a wider range of models, but these limits cannot be applied to other nuclei if the anomaly is composition-dependent. It is also shown that it may require very high sensitivity for terrestrial experiments to discriminate among some models if such a decay anomaly exists, motivating the consideration of future spacecraft experiments which would require less precision. A mission on which such an experiment could be run is proposed. The proposed mission will take various isotopes on a spacecraft that has a large variation in radial distance and return them to Earth. Two different types of trajectories are considered: one with intermediate Venus flybys and one that injects directly into an Earth-resonant orbit. It is shown that each of these types of trajectories have their relative merits with regards to the scientific objective. The suitability of the upcoming Solar Probe Plus and Solar Orbiter missions to perform this experiment is also investigated.

  3. Analyzing Shuttle Orbiter Trajectories

    NASA Technical Reports Server (NTRS)

    Lear, W. M.

    1986-01-01

    LRBET4 program best-estimated-of-trajectory (BET) calculation for post-flight trajectory analysis of Shuttle orbiter. Produces estimated measurements for comparing predicted and actual trajectory of Earth-orbiting spacecraft. Kalman filter and smoothing filter applied to input data to estimate state vector, reduce noise, and produce BET. LRBET4 written in FORTRAN IV for batch execution.

  4. Integrating graph partitioning and matching for trajectory analysis in video surveillance.

    PubMed

    Lin, Liang; Lu, Yongyi; Pan, Yan; Chen, Xiaowu

    2012-12-01

    In order to track moving objects in long range against occlusion, interruption, and background clutter, this paper proposes a unified approach for global trajectory analysis. Instead of the traditional frame-by-frame tracking, our method recovers target trajectories based on a short sequence of video frames, e.g., 15 frames. We initially calculate a foreground map at each frame obtained from a state-of-the-art background model. An attribute graph is then extracted from the foreground map, where the graph vertices are image primitives represented by the composite features. With this graph representation, we pose trajectory analysis as a joint task of spatial graph partitioning and temporal graph matching. The task can be formulated by maximizing a posteriori under the Bayesian framework, in which we integrate the spatio-temporal contexts and the appearance models. The probabilistic inference is achieved by a data-driven Markov chain Monte Carlo algorithm. Given a period of observed frames, the algorithm simulates an ergodic and aperiodic Markov chain, and it visits a sequence of solution states in the joint space of spatial graph partitioning and temporal graph matching. In the experiments, our method is tested on several challenging videos from the public datasets of visual surveillance, and it outperforms the state-of-the-art methods. PMID:22875250

  5. The application of trajectory analysis for an early warning system in STEM courses

    NASA Astrophysics Data System (ADS)

    Lee, Un Jung

    The retention of STEM (science, technology, engineering, and mathematics) majors has become a national concern. "Early warning systems" (EWS) are being developed to identify students who perform poorly early in the semester so that interventions can be implemented. The research reported here utilizes clicker scores and review quiz scores collected in every class session for the longitudinal analysis, as well as pre-course concept inventory scores and self-reported student characteristics. Pre course concept inventory scores were significantly predictive of final course grade. Student demographic characteristics had a smaller fraction of final course grade explained. The cumulative average student clicker score was highly predictive of final course grade. The cumulative average student review quiz score was also highly predictive of final course grade in spring 2014 semester, but was less predictive and less correlated with final course grade in the fall 2014 semester. The trajectories of transformed clicker and review quiz scores identified student longitudinal patterns of scores. Students with scores that were high at the beginning of the semester had consistently higher scores through the semester. In addition, the Bayesian Posterior Probabilities (BPPs) of clicker score trajectory were significant predictors of final course grade. In a trajectory analysis of ACF and PACF, the number of zero clicker scores was associated with final course grade. In conclusion, pre-course concept inventory scores and clicker scores were effective predictive variables for an EWS.

  6. TRAJECTORY SENSITIVITY ANALYSIS FOR DYNAMIC SECURITY ASSESSMENT AND OTHER APPLICATIONS IN POWER SYSTEMS

    SciTech Connect

    Nguyen, Tony B.; Pai, M. A.

    2014-07-10

    Real time stability evaluation and preventive scheduling in power systems offer many challenges in a stressed power system. Trajectory sensitivity analysis (TSA) is a useful tool for this and other applications in the emerging smart grid area. In this chapter we outline the basic approach of TSA, to extract suitable information from the data and develop reliable metrics or indices to evaluate proximity of the system to an unstable condition. Trajectory sensitivities can be used to compute critical parameters such as clearing time of circuit breakers, tie line flow, etc. in a power system by developing suitable norms for ease of interpretation. The TSA technique has the advantage that model complexity is not a limitation, and the sensitivities can be computed numerically. Suitable metrics are developed from these sensitivities. The TSA technique can be extended to do preventive rescheduling. A brief discussion of other applications of TSA in placement of distributed generation is indicated.

  7. An oilspill trajectory analysis model with a variable wind deflection angle

    USGS Publications Warehouse

    Samuels, W.B.; Huang, N.E.; Amstutz, D.E.

    1982-01-01

    The oilspill trajectory movement algorithm consists of a vector sum of the surface drift component due to wind and the surface current component. In the U.S. Geological Survey oilspill trajectory analysis model, the surface drift component is assumed to be 3.5% of the wind speed and is rotated 20 degrees clockwise to account for Coriolis effects in the Northern Hemisphere. Field and laboratory data suggest, however, that the deflection angle of the surface drift current can be highly variable. An empirical formula, based on field observations and theoretical arguments relating wind speed to deflection angle, was used to calculate a new deflection angle at each time step in the model. Comparisons of oilspill contact probabilities to coastal areas calculated for constant and variable deflection angles showed that the model is insensitive to this changing angle at low wind speeds. At high wind speeds, some statistically significant differences in contact probabilities did appear. ?? 1982.

  8. Maximum likelihood-based analysis of single-molecule photon arrival trajectories.

    PubMed

    Hajdziona, Marta; Molski, Andrzej

    2011-02-01

    In this work we explore the statistical properties of the maximum likelihood-based analysis of one-color photon arrival trajectories. This approach does not involve binning and, therefore, all of the information contained in an observed photon strajectory is used. We study the accuracy and precision of parameter estimates and the efficiency of the Akaike information criterion and the Bayesian information criterion (BIC) in selecting the true kinetic model. We focus on the low excitation regime where photon trajectories can be modeled as realizations of Markov modulated Poisson processes. The number of observed photons is the key parameter in determining model selection and parameter estimation. For example, the BIC can select the true three-state model from competing two-, three-, and four-state kinetic models even for relatively short trajectories made up of 2 × 10(3) photons. When the intensity levels are well-separated and 10(4) photons are observed, the two-state model parameters can be estimated with about 10% precision and those for a three-state model with about 20% precision.

  9. Maximum likelihood-based analysis of single-molecule photon arrival trajectories

    NASA Astrophysics Data System (ADS)

    Hajdziona, Marta; Molski, Andrzej

    2011-02-01

    In this work we explore the statistical properties of the maximum likelihood-based analysis of one-color photon arrival trajectories. This approach does not involve binning and, therefore, all of the information contained in an observed photon strajectory is used. We study the accuracy and precision of parameter estimates and the efficiency of the Akaike information criterion and the Bayesian information criterion (BIC) in selecting the true kinetic model. We focus on the low excitation regime where photon trajectories can be modeled as realizations of Markov modulated Poisson processes. The number of observed photons is the key parameter in determining model selection and parameter estimation. For example, the BIC can select the true three-state model from competing two-, three-, and four-state kinetic models even for relatively short trajectories made up of 2 × 103 photons. When the intensity levels are well-separated and 104 photons are observed, the two-state model parameters can be estimated with about 10% precision and those for a three-state model with about 20% precision.

  10. PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data.

    PubMed

    Roe, Daniel R; Cheatham, Thomas E

    2013-07-01

    We describe PTRAJ and its successor CPPTRAJ, two complementary, portable, and freely available computer programs for the analysis and processing of time series of three-dimensional atomic positions (i.e., coordinate trajectories) and the data therein derived. Common tools include the ability to manipulate the data to convert among trajectory formats, process groups of trajectories generated with ensemble methods (e.g., replica exchange molecular dynamics), image with periodic boundary conditions, create average structures, strip subsets of the system, and perform calculations such as RMS fitting, measuring distances, B-factors, radii of gyration, radial distribution functions, and time correlations, among other actions and analyses. Both the PTRAJ and CPPTRAJ programs and source code are freely available under the GNU General Public License version 3 and are currently distributed within the AmberTools 12 suite of support programs that make up part of the Amber package of computer programs (see http://ambermd.org ). This overview describes the general design, features, and history of these two programs, as well as algorithmic improvements and new features available in CPPTRAJ.

  11. Applications for single cell trajectory analysis in inner ear development and regeneration

    PubMed Central

    Durruthy-Durruthy, Robert; Heller, Stefan

    2015-01-01

    Single cell trajectory analysis is a computational approach that orders cells along a pseudotime axis. This temporal modeling approach allows the characterization of transitional processes such as lineage development, response to insult, and tissue regeneration. The concept can also be applied to resolve spatial organization of cells within the originating tissue. Known as temporal and spatial transcriptomics, respectively, these methods belong to the most powerful analytical analysis techniques for quantitative gene expression data currently available. Here, we discuss three different approaches: principal component analysis, the ‘Monocle’ algorithm, and self-organizing maps. We use a previously published qRT-PCR dataset of single neuroblast cells isolated from the developing mouse inner ear to highlight the basic features of the three methods, their individual limitations, as well as the distinct advantages that make them useful for research in the inner ear. The complex developmental morphogenesis of the inner ear and its specific challenges such as the paucity of cells as well as important open questions such as sensory hair cell regeneration render this organ as a prime target for single cell trajectory analysis strategies. PMID:25532874

  12. A Four Degree of Freedom Malfunction Trajectory Analysis for Public Safety

    NASA Astrophysics Data System (ADS)

    Wilde, Paul D.; Weil, Andre O.; Draper, Christopher

    2010-09-01

    The FAA sponsored the development of computational simulations of the malfunction turn behavior of a new launch vehicle upper stage during African over-flight sufficient to compute foreseeable break-up state vectors, which are often critical input to public risk analyses. This paper describes the development and validation of a new method that uses a four Degree-of-Freedom(DOF) model to account for jet damping in the computation of break-up state vectors associated with malfunction turns, with a focus on typical malfunctions that manifest during down range over-flight. The lack of aerodynamic forces during over-flight makes simplified modeling of malfunction trajectories easier and more realistic than in the launch area. In addition, the lack of aerodynamic forces during over-flight allows the vehicle to potentially reach significant tumble rates before breaking up, and thus increases the potential importance of jet damping. The influence of jet damping can provide a limit to the tumble rate a vehicle can achieve as a result of a constant thrust offset as described in this paper. Furthermore, a nozzle burn-through could generate a thrust offset that produces a somewhat different vehicle response compared to a thrust vector control malfunction because of the influence of the location and direction of the thrust anomaly, as described in this analysis. The fundamental goals of this effort were to(1) develop a method to estimate malfunction trajectories using data typically made available to US agencies that oversee launch safety and in the absence of the detailed input data necessary for a 6-DOF model, and(2) verify that the method provides reasonable results in comparison to 6-DOF model results. The results indicate that the new method produces useful results for public safety analysis of down range launch vehicle over-flight. The newly developed malfunction trajectory analysis method might be useful during reentry or launch area risk analyses also, although those

  13. Programmer's manual for the Mission Analysis Evaluation and Space Trajectory Operations program (MAESTRO)

    NASA Technical Reports Server (NTRS)

    Lutzky, D.; Bjorkman, W. S.

    1973-01-01

    The Mission Analysis Evaluation and Space Trajectory Operations program known as MAESTRO is described. MAESTRO is an all FORTRAN, block style, computer program designed to perform various mission control tasks. This manual is a guide to MAESTRO, providing individuals the capability of modifying the program to suit their needs. Descriptions are presented of each of the subroutines descriptions consist of input/output description, theory, subroutine description, and a flow chart where applicable. The programmer's manual also contains a detailed description of the common blocks, a subroutine cross reference map, and a general description of the program structure.

  14. Optimum Three Impulse Trajectory Generator with Patched Conic Trajectory Model

    NASA Technical Reports Server (NTRS)

    Payne, M. H.; Pines, S.; Horsewood, J. L.

    1972-01-01

    Optimal multi-impulse trajectories were investigated as a nominal about which asymptotic expansion was used to obtain approximations of optimal low thrust trajectories. The work consisted of the analysis and description of an optimal 3-impulse trajectory program. A patched-conic trajectory model was specifically designed for compatibility with the subsequent addition of the low thrust expansion approximation.

  15. Identification of synoptic precursors to extreme precipitation events in the Swiss Alps by the analysis of backward trajectories

    NASA Astrophysics Data System (ADS)

    Nguyen, L.; Horton, P.; Jaboyedoff, M.

    2015-12-01

    One of the most expensive natural disasters in Switzerland consists in floods related to heavy precipitation. The occurrence of heavy rainfall may induce landslides and debris flows, as observed during three major precipitation events that occurred recently in the Swiss Alps (August 1987, September 1993 and October 2000). Even though all these events took place under a southerly circulation, especially in autumn, not all southerly circulations lead to heavy precipitation. Although many studies tried to understand them, they are still difficult to forecast. Therefore, this work aims to identify synoptic precursors to such events throughout backward trajectories analysis. Part one tests as many combinations of tools, datasets and methods as possible in order to compare the trajectories in the case of heavy precipitations in the Alps and to reduce the number of models to be assessed for the second part by selecting the most relevant. As a result, we removed models yielding to similar results by using an absolute horizontal transport deviation measure (ATEH). The trajectories were processed with tools (HYSPLIT, a Matlab script developed at the University of Lausanne, and METEX) based on different Reanalysis (NCEP/NCAR, ECMWF, Japanese and NASA). Moreover, different types of trajectories (3D, isobaric, isentropic, isosigma, and constant density) have been used. As a result, 21 trajectory models were compared, and 9 were selected. Results show that most of the differences between trajectories are mainly related to the dataset rather than to the model. In part two, the 9 selected models were used to search precursors leading to heavy precipitations. 10-days backward trajectories were processed for the Binn station at different pressure levels, for all the days between 1961 and 2014 characterized by a southerly circulation in autumn. Based on these trajectories, two analysis for the identification of precursors were conducted. First, the ATEH was used to assess

  16. Spatio-Temporal Distribution Characteristics and Trajectory Similarity Analysis of Tuberculosis in Beijing, China.

    PubMed

    Li, Lan; Xi, Yuliang; Ren, Fu

    2016-03-01

    Tuberculosis (TB) is an infectious disease with one of the highest reported incidences in China. The detection of the spatio-temporal distribution characteristics of TB is indicative of its prevention and control conditions. Trajectory similarity analysis detects variations and loopholes in prevention and provides urban public health officials and related decision makers more information for the allocation of public health resources and the formulation of prioritized health-related policies. This study analysed the spatio-temporal distribution characteristics of TB from 2009 to 2014 by utilizing spatial statistics, spatial autocorrelation analysis, and space-time scan statistics. Spatial statistics measured the TB incidence rate (TB patients per 100,000 residents) at the district level to determine its spatio-temporal distribution and to identify characteristics of change. Spatial autocorrelation analysis was used to detect global and local spatial autocorrelations across the study area. Purely spatial, purely temporal and space-time scan statistics were used to identify purely spatial, purely temporal and spatio-temporal clusters of TB at the district level. The other objective of this study was to compare the trajectory similarities between the incidence rates of TB and new smear-positive (NSP) TB patients in the resident population (NSPRP)/new smear-positive TB patients in the TB patient population (NSPTBP)/retreated smear-positive (RSP) TB patients in the resident population (RSPRP)/retreated smear-positive TB patients in the TB patient population (RSPTBP) to detect variations and loopholes in TB prevention and control among the districts in Beijing. The incidence rates in Beijing exhibited a gradual decrease from 2009 to 2014. Although global spatial autocorrelation was not detected overall across all of the districts of Beijing, individual districts did show evidence of local spatial autocorrelation: Chaoyang and Daxing were Low-Low districts over the six

  17. Spatio-Temporal Distribution Characteristics and Trajectory Similarity Analysis of Tuberculosis in Beijing, China

    PubMed Central

    Li, Lan; Xi, Yuliang; Ren, Fu

    2016-01-01

    Tuberculosis (TB) is an infectious disease with one of the highest reported incidences in China. The detection of the spatio-temporal distribution characteristics of TB is indicative of its prevention and control conditions. Trajectory similarity analysis detects variations and loopholes in prevention and provides urban public health officials and related decision makers more information for the allocation of public health resources and the formulation of prioritized health-related policies. This study analysed the spatio-temporal distribution characteristics of TB from 2009 to 2014 by utilizing spatial statistics, spatial autocorrelation analysis, and space-time scan statistics. Spatial statistics measured the TB incidence rate (TB patients per 100,000 residents) at the district level to determine its spatio-temporal distribution and to identify characteristics of change. Spatial autocorrelation analysis was used to detect global and local spatial autocorrelations across the study area. Purely spatial, purely temporal and space-time scan statistics were used to identify purely spatial, purely temporal and spatio-temporal clusters of TB at the district level. The other objective of this study was to compare the trajectory similarities between the incidence rates of TB and new smear-positive (NSP) TB patients in the resident population (NSPRP)/new smear-positive TB patients in the TB patient population (NSPTBP)/retreated smear-positive (RSP) TB patients in the resident population (RSPRP)/retreated smear-positive TB patients in the TB patient population (RSPTBP) to detect variations and loopholes in TB prevention and control among the districts in Beijing. The incidence rates in Beijing exhibited a gradual decrease from 2009 to 2014. Although global spatial autocorrelation was not detected overall across all of the districts of Beijing, individual districts did show evidence of local spatial autocorrelation: Chaoyang and Daxing were Low-Low districts over the six

  18. Spatio-Temporal Distribution Characteristics and Trajectory Similarity Analysis of Tuberculosis in Beijing, China.

    PubMed

    Li, Lan; Xi, Yuliang; Ren, Fu

    2016-03-07

    Tuberculosis (TB) is an infectious disease with one of the highest reported incidences in China. The detection of the spatio-temporal distribution characteristics of TB is indicative of its prevention and control conditions. Trajectory similarity analysis detects variations and loopholes in prevention and provides urban public health officials and related decision makers more information for the allocation of public health resources and the formulation of prioritized health-related policies. This study analysed the spatio-temporal distribution characteristics of TB from 2009 to 2014 by utilizing spatial statistics, spatial autocorrelation analysis, and space-time scan statistics. Spatial statistics measured the TB incidence rate (TB patients per 100,000 residents) at the district level to determine its spatio-temporal distribution and to identify characteristics of change. Spatial autocorrelation analysis was used to detect global and local spatial autocorrelations across the study area. Purely spatial, purely temporal and space-time scan statistics were used to identify purely spatial, purely temporal and spatio-temporal clusters of TB at the district level. The other objective of this study was to compare the trajectory similarities between the incidence rates of TB and new smear-positive (NSP) TB patients in the resident population (NSPRP)/new smear-positive TB patients in the TB patient population (NSPTBP)/retreated smear-positive (RSP) TB patients in the resident population (RSPRP)/retreated smear-positive TB patients in the TB patient population (RSPTBP) to detect variations and loopholes in TB prevention and control among the districts in Beijing. The incidence rates in Beijing exhibited a gradual decrease from 2009 to 2014. Although global spatial autocorrelation was not detected overall across all of the districts of Beijing, individual districts did show evidence of local spatial autocorrelation: Chaoyang and Daxing were Low-Low districts over the six

  19. Statistically optimal analysis of state-discretized trajectory data from multiple thermodynamic states.

    PubMed

    Wu, Hao; Mey, Antonia S J S; Rosta, Edina; Noé, Frank

    2014-12-01

    We propose a discrete transition-based reweighting analysis method (dTRAM) for analyzing configuration-space-discretized simulation trajectories produced at different thermodynamic states (temperatures, Hamiltonians, etc.) dTRAM provides maximum-likelihood estimates of stationary quantities (probabilities, free energies, expectation values) at any thermodynamic state. In contrast to the weighted histogram analysis method (WHAM), dTRAM does not require data to be sampled from global equilibrium, and can thus produce superior estimates for enhanced sampling data such as parallel/simulated tempering, replica exchange, umbrella sampling, or metadynamics. In addition, dTRAM provides optimal estimates of Markov state models (MSMs) from the discretized state-space trajectories at all thermodynamic states. Under suitable conditions, these MSMs can be used to calculate kinetic quantities (e.g., rates, timescales). In the limit of a single thermodynamic state, dTRAM estimates a maximum likelihood reversible MSM, while in the limit of uncorrelated sampling data, dTRAM is identical to WHAM. dTRAM is thus a generalization to both estimators.

  20. Statistically optimal analysis of state-discretized trajectory data from multiple thermodynamic states

    SciTech Connect

    Wu, Hao; Mey, Antonia S. J. S.; Noé, Frank; Rosta, Edina

    2014-12-07

    We propose a discrete transition-based reweighting analysis method (dTRAM) for analyzing configuration-space-discretized simulation trajectories produced at different thermodynamic states (temperatures, Hamiltonians, etc.) dTRAM provides maximum-likelihood estimates of stationary quantities (probabilities, free energies, expectation values) at any thermodynamic state. In contrast to the weighted histogram analysis method (WHAM), dTRAM does not require data to be sampled from global equilibrium, and can thus produce superior estimates for enhanced sampling data such as parallel/simulated tempering, replica exchange, umbrella sampling, or metadynamics. In addition, dTRAM provides optimal estimates of Markov state models (MSMs) from the discretized state-space trajectories at all thermodynamic states. Under suitable conditions, these MSMs can be used to calculate kinetic quantities (e.g., rates, timescales). In the limit of a single thermodynamic state, dTRAM estimates a maximum likelihood reversible MSM, while in the limit of uncorrelated sampling data, dTRAM is identical to WHAM. dTRAM is thus a generalization to both estimators.

  1. Trajectories of acute low back pain: a latent class growth analysis.

    PubMed

    Downie, Aron S; Hancock, Mark J; Rzewuska, Magdalena; Williams, Christopher M; Lin, Chung-Wei Christine; Maher, Christopher G

    2016-01-01

    Characterising the clinical course of back pain by mean pain scores over time may not adequately reflect the complexity of the clinical course of acute low back pain. We analysed pain scores over 12 weeks for 1585 patients with acute low back pain presenting to primary care to identify distinct pain trajectory groups and baseline patient characteristics associated with membership of each cluster. This was a secondary analysis of the PACE trial that evaluated paracetamol for acute low back pain. Latent class growth analysis determined a 5 cluster model, which comprised 567 (35.8%) patients who recovered by week 2 (cluster 1, rapid pain recovery); 543 (34.3%) patients who recovered by week 12 (cluster 2, pain recovery by week 12); 222 (14.0%) patients whose pain reduced but did not recover (cluster 3, incomplete pain recovery); 167 (10.5%) patients whose pain initially decreased but then increased by week 12 (cluster 4, fluctuating pain); and 86 (5.4%) patients who experienced high-level pain for the whole 12 weeks (cluster 5, persistent high pain). Patients with longer pain duration were more likely to experience delayed recovery or nonrecovery. Belief in greater risk of persistence was associated with nonrecovery, but not delayed recovery. Higher pain intensity, longer duration, and workers' compensation were associated with persistent high pain, whereas older age and increased number of episodes were associated with fluctuating pain. Identification of discrete pain trajectory groups offers the potential to better manage acute low back pain.

  2. Trajectories of acute low back pain: a latent class growth analysis.

    PubMed

    Downie, Aron S; Hancock, Mark J; Rzewuska, Magdalena; Williams, Christopher M; Lin, Chung-Wei Christine; Maher, Christopher G

    2016-01-01

    Characterising the clinical course of back pain by mean pain scores over time may not adequately reflect the complexity of the clinical course of acute low back pain. We analysed pain scores over 12 weeks for 1585 patients with acute low back pain presenting to primary care to identify distinct pain trajectory groups and baseline patient characteristics associated with membership of each cluster. This was a secondary analysis of the PACE trial that evaluated paracetamol for acute low back pain. Latent class growth analysis determined a 5 cluster model, which comprised 567 (35.8%) patients who recovered by week 2 (cluster 1, rapid pain recovery); 543 (34.3%) patients who recovered by week 12 (cluster 2, pain recovery by week 12); 222 (14.0%) patients whose pain reduced but did not recover (cluster 3, incomplete pain recovery); 167 (10.5%) patients whose pain initially decreased but then increased by week 12 (cluster 4, fluctuating pain); and 86 (5.4%) patients who experienced high-level pain for the whole 12 weeks (cluster 5, persistent high pain). Patients with longer pain duration were more likely to experience delayed recovery or nonrecovery. Belief in greater risk of persistence was associated with nonrecovery, but not delayed recovery. Higher pain intensity, longer duration, and workers' compensation were associated with persistent high pain, whereas older age and increased number of episodes were associated with fluctuating pain. Identification of discrete pain trajectory groups offers the potential to better manage acute low back pain. PMID:26397929

  3. Trajectories of Childbearing among HIV Infected Indian Women: A Sequence Analysis Approach

    PubMed Central

    Darak, Shrinivas; Mills, Melinda; Kulkarni, Vinay; Kulkarni, Sanjeevani; Hutter, Inge; Janssen, Fanny

    2015-01-01

    Background HIV infection closely relates to and deeply affects the reproductive career of those infected. However, little is known about the reproductive career trajectories, specifically the interaction of the timing of HIV diagnosis with the timing and sequencing of reproductive events among HIV infected women. This is the first study to describe and typify this interaction. Methods Retrospective calendar data of ever married HIV infected women aged 15-45 attending a HIV clinic in Pune, Maharashtra, Western India (N=622) on reproductive events such as marriage, cohabitation with the partner, use of contraception, pregnancy, childbirth and HIV diagnosis were analyzed using sequence analysis and multinomial logistic regression. Results Optimal matching revealed three distinct trajectories: 1) HIV diagnosis concurrent with childbearing (40.7%), 2) HIV diagnosis after childbearing (32.1%), and 3) HIV diagnosis after husband’s death (27.2%). Multinomial logistic regression (trajectory 1 = baseline) showed that women who got married before the age of 21 years and who had no or primary level education had a significantly higher risk of knowing their HIV status either after childbearing or close to their husband’s death. The risk of HIV diagnosis after husband’s death was also higher among rural women and those who were diagnosed before 2005. Conclusions Three distinct patterns of interaction of timing of HIV diagnosis with timing and sequencing of events in the reproductive career were observed that have clear implications for (i) understanding of the individual life planning process in the context of HIV, (ii) formulation of assumptions for estimating HIV infected women in need of PMTCT services, and (iii) provision of care services. PMID:25906185

  4. MD-2 binds cholesterol.

    PubMed

    Choi, Soo-Ho; Kim, Jungsu; Gonen, Ayelet; Viriyakosol, Suganya; Miller, Yury I

    2016-02-19

    Cholesterol is a structural component of cellular membranes, which is transported from liver to peripheral cells in the form of cholesterol esters (CE), residing in the hydrophobic core of low-density lipoprotein. Oxidized CE (OxCE) is often found in plasma and in atherosclerotic lesions of subjects with cardiovascular disease. Our earlier studies have demonstrated that OxCE activates inflammatory responses in macrophages via toll-like receptor-4 (TLR4). Here we demonstrate that cholesterol binds to myeloid differentiation-2 (MD-2), a TLR4 ancillary molecule, which is a binding receptor for bacterial lipopolysaccharide (LPS) and is indispensable for LPS-induced TLR4 dimerization and signaling. Cholesterol binding to MD-2 was competed by LPS and by OxCE-modified BSA. Furthermore, soluble MD-2 in human plasma and MD-2 in mouse atherosclerotic lesions carried cholesterol, the finding supporting the biological significance of MD-2 cholesterol binding. These results help understand the molecular basis of TLR4 activation by OxCE and mechanisms of chronic inflammation in atherosclerosis.

  5. Automatic Analysis of Cellularity in Glioblastoma and Correlation with ADC Using Trajectory Analysis and Automatic Nuclei Counting

    PubMed Central

    Burth, Sina; Kieslich, Pascal J.; Jungk, Christine; Sahm, Felix; Kickingereder, Philipp; Kiening, Karl; Unterberg, Andreas; Wick, Wolfgang; Schlemmer, Heinz-Peter; Bendszus, Martin; Radbruch, Alexander

    2016-01-01

    Objective Several studies have analyzed a correlation between the apparent diffusion coefficient (ADC) derived from diffusion-weighted MRI and the tumor cellularity of corresponding histopathological specimens in brain tumors with inconclusive findings. Here, we compared a large dataset of ADC and cellularity values of stereotactic biopsies of glioblastoma patients using a new postprocessing approach including trajectory analysis and automatic nuclei counting. Materials and Methods Thirty-seven patients with newly diagnosed glioblastomas were enrolled in this study. ADC maps were acquired preoperatively at 3T and coregistered to the intraoperative MRI that contained the coordinates of the biopsy trajectory. 561 biopsy specimens were obtained; corresponding cellularity was calculated by semi-automatic nuclei counting and correlated to the respective preoperative ADC values along the stereotactic biopsy trajectory which included areas of T1-contrast-enhancement and necrosis. Results There was a weak to moderate inverse correlation between ADC and cellularity in glioblastomas that varied depending on the approach towards statistical analysis: for mean values per patient, Spearman’s ρ = -0.48 (p = 0.002), for all trajectory values in one joint analysis Spearman’s ρ = -0.32 (p < 0.001). The inverse correlation was additionally verified by a linear mixed model. Conclusions Our data confirms a previously reported inverse correlation between ADC and tumor cellularity. However, the correlation in the current article is weaker than the pooled correlation of comparable previous studies. Hence, besides cell density, other factors, such as necrosis and edema might influence ADC values in glioblastomas. PMID:27467557

  6. MIDAS - Mission design and analysis software for the optimization of ballistic interplanetary trajectories

    NASA Technical Reports Server (NTRS)

    Sauer, Carl G., Jr.

    1989-01-01

    A patched conic trajectory optimization program MIDAS is described that was developed to investigate a wide variety of complex ballistic heliocentric transfer trajectories. MIDAS includes the capability of optimizing trajectory event times such as departure date, arrival date, and intermediate planetary flyby dates and is able to both add and delete deep space maneuvers when dictated by the optimization process. Both powered and unpowered flyby or gravity assist trajectories of intermediate bodies can be handled and capability is included to optimize trajectories having a rendezvous with an intermediate body such as for a sample return mission. Capability is included in the optimization process to constrain launch energy and launch vehicle parking orbit parameters.

  7. User's guide to the Mission Analysis Evaluation and Space Trajectory Operations program (MAESTRO)

    NASA Technical Reports Server (NTRS)

    Lutzky, D.; Schafer, J.

    1973-01-01

    The MAESTRO system is a mission analysis tool designed to present to the user information necessary to make the various decisions required in the design and execution of a spaceflight mission. The system was designed so that it can be used in both the pre-launch mission planning phase of a mission and during the flight as an in-flight decision making tool. A description of each of the following modes is presented: (1) trajectory propagation mode; (2) retro-fire determination mode; (3) midcourse analysis determination mode; (4) Monte Carlo mode; (5) verification mode; (6) orbit stability mode; and (7) post injection trim mode. A description of the inputs necessary to run the program mode is given along with a sample case.

  8. Evaluation of ionic pollutants of acid fog and rain using a factor analysis and back trajectories.

    PubMed

    Adzuhata, T; Inotsume, J; Okamura, T; Kikuchi, R; Ozeki, T; Kajikawa, M; Ogawa, N

    2001-01-01

    Fog and rain water samples were collected at the same time in the Akita Hachimantai mountain range in northern Japan from June to September in 1998 and 1999. The various ion concentrations in these samples were analyzed, and the fog droplet sizes were measured for each fog event. As the fog droplet size increased, the ion concentration decreased. The slope of log-log plots of the concentration versus the droplet size differed with the kind of ion. In order to characterize the air pollutant, moreover, these data were quantitatively analyzed by an oblique rotational factor analysis. We found that three factors were extracted as the air pollutant source: (NH4)2SO4, acids (HNO3 + H2SO4) and sea-salt. Combining the factor analysis with the 72 h back-trajectory at 850 hPa level, we found that the contribution of each factor varied with the transport pattern of air masses.

  9. Reaction Trajectory Revealed by a Joint Analysis of Protein Data Bank

    PubMed Central

    Ren, Zhong

    2013-01-01

    Structural motions along a reaction pathway hold the secret about how a biological macromolecule functions. If each static structure were considered as a snapshot of the protein molecule in action, a large collection of structures would constitute a multidimensional conformational space of an enormous size. Here I present a joint analysis of hundreds of known structures of human hemoglobin in the Protein Data Bank. By applying singular value decomposition to distance matrices of these structures, I demonstrate that this large collection of structural snapshots, derived under a wide range of experimental conditions, arrange orderly along a reaction pathway. The structural motions along this extensive trajectory, including several helical transformations, arrive at a reverse engineered mechanism of the cooperative machinery (Ren, companion article), and shed light on pathological properties of the abnormal homotetrameric hemoglobins from α-thalassemia. This method of meta-analysis provides a general approach to structural dynamics based on static protein structures in this post genomics era. PMID:24244274

  10. Geometric analysis of minimum-time trajectories for a two-level quantum system

    NASA Astrophysics Data System (ADS)

    Romano, Raffaele

    2014-12-01

    We consider the problem of controlling in minimum time a two-level quantum system which can be subject to a drift. The control is assumed to be bounded in magnitude and to affect two or three independent generators of the dynamics. We describe the time optimal trajectories in SU(2), the Lie group of possible evolutions for the system, by means of a particularly simple parametrization of the group. A key ingredient of our analysis is the introduction of the optimal front line. This tool allows us to fully characterize the time evolution of the reachable sets and to derive the worst-case operators and the corresponding times. The analysis is performed in any regime—controlled dynamics stronger than, of the same magnitude as, or weaker than the drift term—and gives a method to synthesize quantum logic operations on a two-level system in minimum time.

  11. Evaluation of ionic pollutants of acid fog and rain using a factor analysis and back trajectories.

    PubMed

    Adzuhata, T; Inotsume, J; Okamura, T; Kikuchi, R; Ozeki, T; Kajikawa, M; Ogawa, N

    2001-01-01

    Fog and rain water samples were collected at the same time in the Akita Hachimantai mountain range in northern Japan from June to September in 1998 and 1999. The various ion concentrations in these samples were analyzed, and the fog droplet sizes were measured for each fog event. As the fog droplet size increased, the ion concentration decreased. The slope of log-log plots of the concentration versus the droplet size differed with the kind of ion. In order to characterize the air pollutant, moreover, these data were quantitatively analyzed by an oblique rotational factor analysis. We found that three factors were extracted as the air pollutant source: (NH4)2SO4, acids (HNO3 + H2SO4) and sea-salt. Combining the factor analysis with the 72 h back-trajectory at 850 hPa level, we found that the contribution of each factor varied with the transport pattern of air masses. PMID:11993680

  12. Comparative Analysis of VLF Signal Variation along Trajectory Induced by X-ray Solar Flares

    NASA Astrophysics Data System (ADS)

    Kolarski, A.; Grubor, D.

    2015-12-01

    Comparative qualitative analysis of amplitude and phase delay variations was carried out along the trajectory of GQD/22.1 kHz and NAA/24.0 kHz VLF signal traces, propagating from Skelton (UK) and Maine (USA) toward Belgrade, induced by four isolated solar X-ray flare events occurred during the period from September 2005 to December 2006. For monitoring, recording and for storage of VLF data at the Institute of Physics in Belgrade, Serbia, the AbsPAL system was used. For modeling purposes of propagating conditions along GQD and NAA signal propagation paths, LWPCv21 program code was used. Occurred solar flare events induced lower ionosphere electron density height profile changes, causing perturbations in VLF wave propagation within Earth-ionosphere waveguides. As analyzed VLF signals characterize by different propagation parameters along trajectories from their transmitters to the Belgrade receiver site, their propagation is affected in different ways for different solar flare events and also for the same solar flare events.

  13. Student trajectories in physics: the need for analysis through a socio-cultural lens

    NASA Astrophysics Data System (ADS)

    Zapata, Mara

    2010-09-01

    An analysis of student connections through time and space relative to the core discipline of physics is attempted, as viewed through the lens of actor-network-theory, by Antonia Candela. Using lenses of cultural realities, networks, and perceived power in the discourse of one specific university in the capital city of Mexico and one undergraduate physics classroom, the trajectories and itineraries of students are analyzed, relative to a physics professor's pedagogical practices. This ethnographic study then yields comparisons between Mexican undergraduate students and students from the United States. Actor network theory recognizes that the symbiotic relationship existing between an actor and a continuum of space and time is defined by the symbiotic yet interdependent relationships and networks of practice (Lemke in Downward causation: Minds, bodies, and matter 2000). As part of this study and in line with actor-network-theory, human actors and non-human participants were viewed in relation to how subjects acted and were acted upon within networks of practice. Through this forum I reflect on this work with particular focus on the issues of situatedness of actors from a sociocultural perspective and how established networks viewed within this perspective frame and subsequently impact student trajectories and itineraries. In essence I argue for a need to look at a myriad of further complexities driving the symbiotic relationships being analyzed.

  14. A special protection scheme utilizing trajectory sensitivity analysis in power transmission

    NASA Astrophysics Data System (ADS)

    Suriyamongkol, Dan

    In recent years, new measurement techniques have provided opportunities to improve the North American Power System observability, control and protection. This dissertation discusses the formulation and design of a special protection scheme based on a novel utilization of trajectory sensitivity techniques with inputs consisting of system state variables and parameters. Trajectory sensitivity analysis (TSA) has been used in previous publications as a method for power system security and stability assessment, and the mathematical formulation of TSA lends itself well to some of the time domain power system simulation techniques. Existing special protection schemes often have limited sets of goals and control actions. The proposed scheme aims to maintain stability while using as many control actions as possible. The approach here will use the TSA in a novel way by using the sensitivities of system state variables with respect to state parameter variations to determine the state parameter controls required to achieve the desired state variable movements. The initial application will operate based on the assumption that the modeled power system has full system observability, and practical considerations will be discussed.

  15. Single-cell analysis delineates a trajectory toward the human early otic lineage.

    PubMed

    Ealy, Megan; Ellwanger, Daniel C; Kosaric, Nina; Stapper, Andres P; Heller, Stefan

    2016-07-26

    Efficient pluripotent stem cell guidance protocols for the production of human posterior cranial placodes such as the otic placode that gives rise to the inner ear do not exist. Here we use a systematic approach including defined monolayer culture, signaling modulation, and single-cell gene expression analysis to delineate a developmental trajectory for human otic lineage specification in vitro. We found that modulation of bone morphogenetic protein (BMP) and WNT signaling combined with FGF and retinoic acid treatments over the course of 18 days generates cell populations that develop chronological expression of marker genes of non-neural ectoderm, preplacodal ectoderm, and early otic lineage. Gene expression along this differentiation path is distinct from other lineages such as endoderm, mesendoderm, and neural ectoderm. Single-cell analysis exposed the heterogeneity of differentiating cells and allowed discrimination of non-neural ectoderm and otic lineage cells from off-target populations. Pseudotemporal ordering of human embryonic stem cell and induced pluripotent stem cell-derived single-cell gene expression profiles revealed an initially synchronous guidance toward non-neural ectoderm, followed by comparatively asynchronous occurrences of preplacodal and otic marker genes. Positive correlation of marker gene expression between both cell lines and resemblance to mouse embryonic day 10.5 otocyst cells implied reasonable robustness of the guidance protocol. Single-cell trajectory analysis further revealed that otic progenitor cell types are induced in monolayer cultures, but further development appears impeded, likely because of lack of a lineage-stabilizing microenvironment. Our results provide a framework for future exploration of stabilizing microenvironments for efficient differentiation of stem cell-generated human otic cell types. PMID:27402757

  16. A genome-wide analysis of the LBD (LATERAL ORGAN BOUNDARIES domain) gene family in Malus domestica with a functional characterization of MdLBD11.

    PubMed

    Wang, Xiaofei; Zhang, Shizhong; Su, Ling; Liu, Xin; Hao, Yujin

    2013-01-01

    The plant-specific LBD (LATERAL ORGAN BOUNDARIES domain) genes belong to a major family of transcription factor that encode a zinc finger-like domain. It has been shown that LBD genes play crucial roles in the growth and development of Arabidopsis and other plant species. However, no detailed information concerning this family is available for apple. In the present study, we analyzed the apple (Malus domestica) genome and identified 58 LBD genes. This gene family was tested for its phylogenetic relationships with homologous genes in the Arabidopsis genome, as well as its location in the genome, structure and expression. We also transformed one MdLBD gene into Arabidopsis to evaluate its function. Like Arabidopsis, apple LBD genes also have a conserved CX2CX6CX3C zinc finger-like domain in the N terminus and can be divided into two classes. The expression profile indicated that apple LBD genes exhibited a variety of expression patterns, suggesting that they have diverse functions. At the same time, the expression analysis implied that members of this apple gene family were responsive to hormones and stress and that they may participate in hormone-mediated plant organogenesis, which was demonstrated with the overexpression of the apple LBD gene MdLBD11, resulting in an abnormal phenotype. This phenotype included upward curling leaves, delayed flowering, downward-pointing flowers, siliques and other abnormal traits. Based on these data, we concluded that the MdLBD genes may play an important role in apple growth and development as in Arabidopsis and other species.

  17. Fast analysis of molecular dynamics trajectories with graphics processing units—Radial distribution function histogramming

    NASA Astrophysics Data System (ADS)

    Levine, Benjamin G.; Stone, John E.; Kohlmeyer, Axel

    2011-05-01

    The calculation of radial distribution functions (RDFs) from molecular dynamics trajectory data is a common and computationally expensive analysis task. The rate limiting step in the calculation of the RDF is building a histogram of the distance between atom pairs in each trajectory frame. Here we present an implementation of this histogramming scheme for multiple graphics processing units (GPUs). The algorithm features a tiling scheme to maximize the reuse of data at the fastest levels of the GPU's memory hierarchy and dynamic load balancing to allow high performance on heterogeneous configurations of GPUs. Several versions of the RDF algorithm are presented, utilizing the specific hardware features found on different generations of GPUs. We take advantage of larger shared memory and atomic memory operations available on state-of-the-art GPUs to accelerate the code significantly. The use of atomic memory operations allows the fast, limited-capacity on-chip memory to be used much more efficiently, resulting in a fivefold increase in performance compared to the version of the algorithm without atomic operations. The ultimate version of the algorithm running in parallel on four NVIDIA GeForce GTX 480 (Fermi) GPUs was found to be 92 times faster than a multithreaded implementation running on an Intel Xeon 5550 CPU. On this multi-GPU hardware, the RDF between two selections of 1,000,000 atoms each can be calculated in 26.9 s per frame. The multi-GPU RDF algorithms described here are implemented in VMD, a widely used and freely available software package for molecular dynamics visualization and analysis.

  18. Analysis of Spatio-Temporal Traffic Patterns Based on Pedestrian Trajectories

    NASA Astrophysics Data System (ADS)

    Busch, S.; Schindler, T.; Klinger, T.; Brenner, C.

    2016-06-01

    For driver assistance and autonomous driving systems, it is essential to predict the behaviour of other traffic participants. Usually, standard filter approaches are used to this end, however, in many cases, these are not sufficient. For example, pedestrians are able to change their speed or direction instantly. Also, there may be not enough observation data to determine the state of an object reliably, e.g. in case of occlusions. In those cases, it is very useful if a prior model exists, which suggests certain outcomes. For example, it is useful to know that pedestrians are usually crossing the road at a certain location and at certain times. This information can then be stored in a map which then can be used as a prior in scene analysis, or in practical terms to reduce the speed of a vehicle in advance in order to minimize critical situations. In this paper, we present an approach to derive such a spatio-temporal map automatically from the observed behaviour of traffic participants in everyday traffic situations. In our experiments, we use one stationary camera to observe a complex junction, where cars, public transportation and pedestrians interact. We concentrate on the pedestrians trajectories to map traffic patterns. In the first step, we extract trajectory segments from the video data. These segments are then clustered in order to derive a spatial model of the scene, in terms of a spatially embedded graph. In the second step, we analyse the temporal patterns of pedestrian movement on this graph. We are able to derive traffic light sequences as well as the timetables of nearby public transportation. To evaluate our approach, we used a 4 hour video sequence. We show that we are able to derive traffic light sequences as well as time tables of nearby public transportation.

  19. A Spatiotemporal Analysis of Brazilian Science from the Perspective of Researchers’ Career Trajectories

    PubMed Central

    Furtado, Caio Alves; Davis, Clodoveu A.; Gonçalves, Marcos André; de Almeida, Jussara Marques

    2015-01-01

    The growth of Brazilian scientific production in recent years is remarkable, which motivates an investigation on the factors, inside and outside the country, that helped shape this wealthy research environment. This article provides a thorough analysis of the education of researchers that constitute the main Brazilian research groups, using data on about 6,000 researchers involved in the country’s National Institutes of Science and Technology (INCT) initiative. Data on the steps taken by each researcher in her education, from the bachelor’s degree to doctorate, including a possible postdoctoral experience, and employment, are extracted from an official curriculum vitae repository. The location and the time at which each career step occurred define spatiotemporal career trajectories. We then analyze such trajectories considering additional data, including the area of knowledge of the INCTs to which each researcher is associated. We found an increasing prevalence of Brazilian institutions in the education of Brazilian scientists, as the number of doctorates earned abroad is decreasing over time. Postdoctoral stages, on the other hand, often take place in Europe or in the United States. Taking an international postdoctoral position after a full education in Brazil suggests a drive towards seeking higher-level exchange and cooperation with foreign groups in a more advanced career stage. Results also show that Brazilian researchers tend to seek employment in regions that are close to the institutions at which they received their bachelor’s degrees, suggesting low mobility within the country. This study can be instrumental in defining public policies for correcting distortions, and can help other developing countries that aim to improve their national science systems. PMID:26513743

  20. A Spatiotemporal Analysis of Brazilian Science from the Perspective of Researchers' Career Trajectories.

    PubMed

    Furtado, Caio Alves; Davis, Clodoveu A; Gonçalves, Marcos André; de Almeida, Jussara Marques

    2015-01-01

    The growth of Brazilian scientific production in recent years is remarkable, which motivates an investigation on the factors, inside and outside the country, that helped shape this wealthy research environment. This article provides a thorough analysis of the education of researchers that constitute the main Brazilian research groups, using data on about 6,000 researchers involved in the country's National Institutes of Science and Technology (INCT) initiative. Data on the steps taken by each researcher in her education, from the bachelor's degree to doctorate, including a possible postdoctoral experience, and employment, are extracted from an official curriculum vitae repository. The location and the time at which each career step occurred define spatiotemporal career trajectories. We then analyze such trajectories considering additional data, including the area of knowledge of the INCTs to which each researcher is associated. We found an increasing prevalence of Brazilian institutions in the education of Brazilian scientists, as the number of doctorates earned abroad is decreasing over time. Postdoctoral stages, on the other hand, often take place in Europe or in the United States. Taking an international postdoctoral position after a full education in Brazil suggests a drive towards seeking higher-level exchange and cooperation with foreign groups in a more advanced career stage. Results also show that Brazilian researchers tend to seek employment in regions that are close to the institutions at which they received their bachelor's degrees, suggesting low mobility within the country. This study can be instrumental in defining public policies for correcting distortions, and can help other developing countries that aim to improve their national science systems.

  1. Transition paths of Met-enkephalin from Markov state modeling of a molecular dynamics trajectory.

    PubMed

    Banerjee, Rahul; Cukier, Robert I

    2014-03-20

    Conformational states and their interconversion pathways of the zwitterionic form of the pentapeptide Met-enkephalin (MetEnk) are identified. An explicit solvent molecular dynamics (MD) trajectory is used to construct a Markov state model (MSM) based on dihedral space clustering of the trajectory, and transition path theory (TPT) is applied to identify pathways between open and closed conformers. In the MD trajectory, only four of the eight backbone dihedrals exhibit bistable behavior. Defining a conformer as the string XXXX with X = "+" or "-" denoting, respectively, positive or negative values of a given dihedral angle and obtaining the populations of these conformers shows that only four conformers are highly populated, implying a strong correlation among these dihedrals. Clustering in dihedral space to construct the MSM finds the same four bistable dihedral angles. These state populations are very similar to those found directly from the MD trajectory. TPT is used to obtain pathways, parametrized by committor values, in dihedral state space that are followed in transitioning from closed to open states. Pathway costs are estimated by introducing a kinetics-based procedure that orders pathways from least (shortest) to greater cost paths. The least costly pathways in dihedral space are found to only involve the same XXXX set of dihedral angles, and the conformers accessed in the closed to open transition pathways are identified. For these major pathways, a correlation between reaction path progress (committors) and the end-to-end distance is identified. A dihedral space principal component analysis of the MD trajectory shows that the first three modes capture most of the overall fluctuation, and pick out the same four dihedrals having essentially all the weight in those modes. A MSM based on root-mean-square backbone clustering was also carried out, with good agreement found with dihedral clustering for the static information, but with results that differ

  2. Uncertainty Optimization Applied to the Monte Carlo Analysis of Planetary Entry Trajectories

    NASA Technical Reports Server (NTRS)

    Olds, John; Way, David

    2001-01-01

    Recently, strong evidence of liquid water under the surface of Mars and a meteorite that might contain ancient microbes have renewed interest in Mars exploration. With this renewed interest, NASA plans to send spacecraft to Mars approx. every 26 months. These future spacecraft will return higher-resolution images, make precision landings, engage in longer-ranging surface maneuvers, and even return Martian soil and rock samples to Earth. Future robotic missions and any human missions to Mars will require precise entries to ensure safe landings near science objective and pre-employed assets. Potential sources of water and other interesting geographic features are often located near hazards, such as within craters or along canyon walls. In order for more accurate landings to be made, spacecraft entering the Martian atmosphere need to use lift to actively control the entry. This active guidance results in much smaller landing footprints. Planning for these missions will depend heavily on Monte Carlo analysis. Monte Carlo trajectory simulations have been used with a high degree of success in recent planetary exploration missions. These analyses ascertain the impact of off-nominal conditions during a flight and account for uncertainty. Uncertainties generally stem from limitations in manufacturing tolerances, measurement capabilities, analysis accuracies, and environmental unknowns. Thousands of off-nominal trajectories are simulated by randomly dispersing uncertainty variables and collecting statistics on forecast variables. The dependability of Monte Carlo forecasts, however, is limited by the accuracy and completeness of the assumed uncertainties. This is because Monte Carlo analysis is a forward driven problem; beginning with the input uncertainties and proceeding to the forecasts outputs. It lacks a mechanism to affect or alter the uncertainties based on the forecast results. If the results are unacceptable, the current practice is to use an iterative, trial

  3. Semi-Automated Trajectory Analysis of Deep Ballistic Penetrating Brain Injury

    PubMed Central

    Folio, Les; Solomon, Jeffrey; Biassou, Nadia; Fischer, Tatjana; Dworzak, Jenny; Raymont, Vanessa; Sinaii, Ninet; Wassermann, Eric M.; Grafman, Jordan

    2016-01-01

    Background Penetrating head injuries (PHIs) are common in combat operations and most have visible wound paths on computed tomography (CT). Objective We assess agreement between an automated trajectory analysis-based assessment of brain injury and manual tracings of encephalomalacia on CT. Methods We analyzed 80 head CTs with ballistic PHI from the Institutional Review Board approved Vietnam head injury registry. Anatomic reports were generated from spatial coordinates of projectile entrance and terminal fragment location. These were compared to manual tracings of the regions of encephalomalacia. Dice’s similarity coefficients, kappa, sensitivities, and specificities were calculated to assess agreement. Times required for case analysis were also compared. Results Results show high specificity of anatomic regions identified on CT with semiautomated anatomical estimates and manual tracings of tissue damage. Radiologist’s and medical students’ anatomic region reports were similar (Kappa 0.8, t-test p < 0.001). Region of probable injury modeling of involved brain structures was sensitive (0.7) and specific (0.9) compared with manually traced structures. Semiautomated analysis was 9-fold faster than manual tracings. Conclusion Our region of probable injury spatial model approximates anatomical regions of encephalomalacia from ballistic PHI with time-saving over manual methods. Results show potential for automated anatomical reporting as an adjunct to current practice of radiologist/neurosurgical review of brain injury by penetrating projectiles. PMID:23707123

  4. Air-breathing hypersonic vehicle guidance and control studies; An integrated trajectory/control analysis methodology: Phase 1

    NASA Technical Reports Server (NTRS)

    Hattis, Philip D.; Malchow, Harvey L.

    1991-01-01

    A tool which generates optimal trajectory/control histories in an integrated manner is generically adapted to the treatment of single-stage-to-orbit air-breathing hypersonic vehicles. The methodology is implemented as a two point boundary value problem solution technique. Its use permits an assessment of an entire near-minimum-fuel trajectory and desired control strategy from takeoff to orbit while satisfying physically derived inequality constraints and while achieving efficient propulsive mode phasing. A simpler analysis strategy that partitions the trajectory into several boundary condition matched segments is also included to construct preliminary trajectory and control history representations with less computational burden than is required for the overall flight profile assessment. A demonstration was accomplished using a tabulated example (winged-cone accelerator) vehicle model that is combined with a newly developed multidimensional cubic spline data smoothing routine. A constrained near-fuel-optimal trajectory, imposing a dynamic pressure limit of 1000 psf, was developed from horizontal takeoff to 20,000 ft/sec relative air speed while aiming for a polar orbit. Previously unspecified propulsive discontinuities were located. Flight regimes demanding rapid attitude changes were identified, dictating control effector and closed-loop controller authority was ascertained after evaluating effector use for vehicle trim. Also, inadequacies in vehicle model representations and specific subsystem models with insufficient fidelity were determined based on unusual control characteristics and/or excessive sensitivity to uncertainty.

  5. General Growth Mixture Analysis of Adolescents' Developmental Trajectories of Anxiety: The Impact of Untested Invariance Assumptions on Substantive Interpretations

    ERIC Educational Resources Information Center

    Morin, Alexandre J. S.; Maiano, Christophe; Nagengast, Benjamin; Marsh, Herbert W.; Morizot, Julien; Janosz, Michel

    2011-01-01

    Substantively, this study investigates potential heterogeneity in the developmental trajectories of anxiety in adolescence. Methodologically, this study demonstrates the usefulness of general growth mixture analysis (GGMA) in addressing these issues and illustrates the impact of untested invariance assumptions on substantive interpretations. This…

  6. Chemical and Trajectory Analysis of an Air Mass Plume from Asia

    NASA Astrophysics Data System (ADS)

    Guo, J. J.; Marrero, J. E.; Blake, D. R.

    2014-12-01

    Tracking the source of pollution events is important in understanding the transport of pollution plumes and impact on areas far from the source. Previous studies have shown that the rising contribution of Asian air pollution to the US has increased the number of days that pollution events exceed National Ambient Air Quality Standards (NAAQS). Whole air samples collected over the Edwards Air Force Base during a June 2014 NASA Student Airborne Research Program (SARP) flight exhibited enhancements in the concentrations of several compounds between 23-32 thousand feet. Chemical tracer analysis of these high altitude samples reveal that the air does not correspond to California emitted air. Chemical signatures in the plume, including high levels of OCS, chloroform, and methyl chloride, and low levels of methyl bromide, indicate that the plume was most heavily influence by coal combustion with contributions from biomass burning events from Asia. Low concentrations of ethene at the high altitude despite enhanced concentrations of ethane and ethyne suggest that this plume was aged. Further analysis of the plume using meteorological wind trajectories reveal that the plume had originated in China approximately 4-5 days prior. This is faster than results from previous studies that had found a Spring transport time of approximately 6 days.

  7. A MD Simulation and Analysis for Aggregation Behaviors of Nanoscale Zero-Valent Iron Particles in Water via MS

    PubMed Central

    Liu, Dongmei; Tang, Huan; Lu, Jing; Cui, Fuyi

    2014-01-01

    With the development of nanotechnology, more nanomaterials will enter into water environment system. Studying the existing form of nanomaterials in water environment will help people benefit from the correct use of them and to reduce the harm to human caused by them for some nanomaterials can bring polluting effect. Aggregation is a main behavior for nanoparticle in water environment. NZVI are used widely in many fields resulting in more NZVI in water environment. Molecular dynamics simulations and Materials Studio software are used to investigate the microaggregation behaviors of NZVI particles. Two scenes are involved: (1) particle size of NZVI in each simulation system is the same, but initial distance of two NZVI particles is different; (2) initial distance of two NZVI particles in each simulation system is the same, but particle size of NZVI is different. Atomistic trajectory, NP activity, total energy, and adsorption of H2O are analyzed with MS. The method provides new quantitative insight into the structure, energy, and dynamics of the aggregation behaviors of NZVI particles in water. It is necessary to understand microchange of NPs in water because it can provide theoretical research that is used to reduce polluting effect of NPs on water environment. PMID:25250388

  8. Numerical analysis of the asymptotic two-point boundary value solution for N-body trajectories.

    NASA Technical Reports Server (NTRS)

    Lancaster, J. E.; Allemann, R. A.

    1972-01-01

    Previously published asymptotic solutions for lunar and interplanetary trajectories have been modified and combined to formulate a general analytical boundary value solution applicable to a broad class of trajectory problems. In addition, the earlier first-order solutions have been extended to second-order to determine if improved accuracy is possible. Comparisons between the asymptotic solution and numerical integration for several lunar and interplanetary trajectories show that the asymptotic solution is generally quite accurate. Also, since no iterations are required, a solution to the boundary value problem is obtained in a fraction of the time required for numerically integrated solutions.

  9. Leg mechanics contribute to establishing swing phase trajectories during memory-guided stepping movements in walking cats: a computational analysis

    PubMed Central

    Pearson, Keir G.; Arbabzada, Naik; Gramlich, Rod; Shinya, Masahiro

    2015-01-01

    When quadrupeds stop walking after stepping over a barrier with their forelegs, the memory of barrier height and location is retained for many minutes. This memory is subsequently used to guide hind leg movements over the barrier when walking is resumed. The upslope of the initial trajectory of hind leg paw movements is strongly dependent on the initial location of the paw relative to the barrier. In this study, we have attempted to determine whether mechanical factors contribute significantly in establishing the slope of the paw trajectories by creating a four-link biomechanical model of a cat hind leg and driving this model with a variety of joint-torque profiles, including average torques for a range of initial paw positions relative to the barrier. Torque profiles for individual steps were determined by an inverse dynamic analysis of leg movements in three normal cats. Our study demonstrates that limb mechanics can contribute to establishing the dependency of trajectory slope on the initial position of the paw relative to the barrier. However, an additional contribution of neuronal motor commands was indicated by the fact that the simulated slopes of paw trajectories were significantly less than the observed slopes. A neuronal contribution to the modification of paw trajectories was also revealed by our observations that both the magnitudes of knee flexor muscle EMG bursts and the initial knee flexion torques depended on initial paw position. Previous studies have shown that a shift in paw position prior to stepping over a barrier changes the paw trajectory to be appropriate for the new paw position. Our data indicate that both mechanical and neuronal factors contribute to this updating process, and that any shift in leg position during the delay period modifies the working memory of barrier location. PMID:26441625

  10. Barrier scattering with complex-valued quantum trajectories: Taxonomy and analysis of isochrones

    SciTech Connect

    David, Julianne K.; Wyatt, Robert E.

    2008-03-07

    To facilitate the search for isochrones when using complex-valued trajectory methods for quantum barrier scattering calculations, the structure and shape of isochrones in the complex plane were studied. Isochrone segments were categorized based on their distinguishing features, which are shared by each situation studied: High and low energy wave packets, scattering from both thick and thin Gaussian and Eckart barriers of varying height. The characteristic shape of the isochrone is a trifurcated system: Trajectories that transmit the barrier are launched from the lower branch (T), while the middle and upper branches form the segments for reflected trajectories (F and B). In addition, a model is presented for the curved section of the lower branch (from which transmitted trajectories are launched), and important features of the complex extension of the initial wave packet are identified.

  11. Trajectory analysis for the nucleus and dust of comet C/2013 A1 (Siding Spring)

    SciTech Connect

    Farnocchia, Davide; Chesley, Steven R.; Chodas, Paul W.; Tricarico, Pasquale; Kelley, Michael S. P.; Farnham, Tony L.

    2014-08-01

    Comet C/2013 A1 (Siding Spring) will experience a high velocity encounter with Mars on 2014 October 19 at a distance of 135,000 km ± 5000 km from the planet center. We present a comprehensive analysis of the trajectory of both the comet nucleus and the dust tail. The nucleus of C/2013 A1 cannot impact on Mars even in the case of unexpectedly large nongravitational perturbations. Furthermore, we compute the required ejection velocities for the dust grains of the tail to reach Mars as a function of particle radius and density and heliocentric distance of the ejection. A comparison between our results and the most current modeling of the ejection velocities suggests that impacts are possible only for millimeter to centimeter size particles released more than 13 AU from the Sun. However, this level of cometary activity that far from the Sun is considered extremely unlikely. The arrival time of these particles spans a 20-minute time interval centered at 2014 October 19 at 20:09 TDB, i.e., around the time that Mars crosses the orbital plane of C/2013 A1. Ejection velocities larger than currently estimated by a factor >2 would allow impacts for smaller particles ejected as close as 3 AU from the Sun. These particles would reach Mars from 19:13 TDB to 20:40 TDB.

  12. Characterizing the Atmospheric Circulation over the Colombian Orinoquia through Lagrangian Back-Trajectory Analysis

    NASA Astrophysics Data System (ADS)

    Orjuela, H. R.; Leon, G. E.; Jimenez-Pizarro, R.

    2012-12-01

    The ongoing transformation of the Colombian Orinoquia (Eastern Plains) due to the rapid expansion of the agricultural frontier and oil production implies a series of new atmospheric emissions, which might negatively impact human health and ecosystems in different ways. Some air pollutants have already been detected in the region. This is the case of Persistent Organic Pollutants (POPs), which are sampled in a site of the Global Atmospheric Passive Sampling (GAPS) network located in Arauca, Colombia. The current understanding on the origin and transport of pollutants is limited due to the lack of information on the atmospheric circulation in the Colombian Orinoquia. This research aims at generating new knowledge on the meteorology of this region mainly for weather forecasting and atmospheric pollution impact assessment. We present a conceptual model of the atmospheric circulation in the Colombian Orinoquia, including the main synoptic and mesoscale factors governing its meteorology. In order to identify the source of air masses and synoptic scale disturbances, we used Lagrangian back trajectories obtained with the model HYSPLIT 4.9 over the period 2000-2010. NCEP/NCAR and Global Data Assimilation System (GDAS) reanalysis results were used as meteorological input to HYSPLIT. Prior to the Lagrangian simulation, these global datasets were evaluated for their capability to reproduce meteorological observations in the region, particularly for rain and flood-triggering conditions. The observational data included satellite images and ground level network measurements by the Colombian Institute of Hydrology, Meteorology and Environmental Research (IDEAM). Windgridds and other data analysis tools were used.

  13. Characteristics of motive force derived from trajectory analysis of Amoeba proteus.

    PubMed

    Masaki, Noritaka; Miyoshi, Hiromi; Tsuchiya, Yoshimi

    2007-01-01

    We used a monochromatic charge-coupled-device camera to observe the migration behavior of Amoeba proteus every 5 s over a time course of 10000 s in order to investigate the characteristics of its centroid movement (cell velocity) over the long term. Fourier transformation of the time series of the cell velocity revealed that its power spectrum exhibits a Lorentz type profile with a relaxation time of a few hundred seconds. Moreover, some sharp peaks were found in the power spectrum, where the ratios of any two frequencies corresponding to the peaks were expressed as simple rational numbers. Analysis of the trajectory using a Langevin equation showed that the power spectrum reflects characteristics of the cell's motive force. These results suggest that some phenomena relating to the cell's motility, such as protoplasmic streaming and the sol-gel transformation of actin filaments, which seem to be independent phenomena and have different relaxation times, interact with each other and cooperatively participate in the generation process of the motive force. PMID:17351734

  14. Two Aspects of the Rural-Urban Divide and Educational Stratification in China: A Trajectory Analysis*

    PubMed Central

    Hao, Lingxin; Hu, Alfred; Lo, Jamie

    2015-01-01

    Contextualized in China’s social change of the past half-century, this paper develops the notion of dichotomous inequality to conceptualize the two aspects of China’s rural-urban divide in educational inequality—the household registration system (hukou) assigns people to a top-bottom hierarchy, and the rural-urban schooling system institutionalizes unequal resource distribution and diverse school mission. Based on this conceptualization, we formulate a Chinese version of the maximally maintained inequality (MMI) hypothesis. We capitalize on individual educational history data from the China General Social Survey (CGSS) 2008 and conduct a trajectory analysis using the generalized mixture modeling to estimate the differential effects of the two aspects of rural-urban divide on educational inequality in China. Findings indicate that (1) the sorting mechanism of the rural hukou places rural-hukou people in the very bottom of educational stratification, (2) the penalty of attending rural pre-tertiary school increases with educational stages, and (3) there is a cumulative disadvantage of rural hukou and rural school. Overall, our findings attest to the Chinese-version MMI and the behind principle of inequality reproduction. PMID:26166835

  15. Uncertainty analysis and robust trajectory linearization control of a flexible air-breathing hypersonic vehicle

    NASA Astrophysics Data System (ADS)

    Pu, Zhiqiang; Tan, Xiangmin; Fan, Guoliang; Yi, Jianqiang

    2014-08-01

    Flexible air-breathing hypersonic vehicles feature significant uncertainties which pose huge challenges to robust controller designs. In this paper, four major categories of uncertainties are analyzed, that is, uncertainties associated with flexible effects, aerodynamic parameter variations, external environmental disturbances, and control-oriented modeling errors. A uniform nonlinear uncertainty model is explored for the first three uncertainties which lumps all uncertainties together and consequently is beneficial for controller synthesis. The fourth uncertainty is additionally considered in stability analysis. Based on these analyses, the starting point of the control design is to decompose the vehicle dynamics into five functional subsystems. Then a robust trajectory linearization control (TLC) scheme consisting of five robust subsystem controllers is proposed. In each subsystem controller, TLC is combined with the extended state observer (ESO) technique for uncertainty compensation. The stability of the overall closed-loop system with the four aforementioned uncertainties and additional singular perturbations is analyzed. Particularly, the stability of nonlinear ESO is also discussed from a Liénard system perspective. At last, simulations demonstrate the great control performance and the uncertainty rejection ability of the robust scheme.

  16. Simulating electron spin resonance spectra of nitroxide spin labels from molecular dynamics and stochastic trajectories

    PubMed Central

    Sezer, Deniz; Freed, Jack H.; Roux, Benoît

    2008-01-01

    Simulating electron spin resonance spectra of nitroxide spin labels from motional models is necessary for the quantitative analysis of experimental spectra. We present a framework for modeling the spin label dynamics by using trajectories such as those from molecular dynamics (MD) simulations combined with stochastic treatment of the global protein tumbling. This is achieved in the time domain after two efficient numerical integrators are developed: One for the quantal dynamics of the spins and the other for the classical rotational diffusion. For the quantal dynamics, we propagate the relevant part of the spin density matrix in Hilbert space. For the diffusional tumbling, we work with quaternions, which enables the treatment of anisotropic diffusion in a potential expanded as a sum of spherical harmonics. Time-averaging arguments are invoked to bridge the gap between the smaller time step of the MD trajectories and the larger time steps appropriate for the rotational diffusion and∕or quantal spin dynamics. PMID:18447510

  17. Analysis of the contribution of experimental bias, experimental noise, and inter-subject biological variability on the assessment of developmental trajectories in diffusion MRI studies of the brain.

    PubMed

    Sadeghi, Neda; Nayak, Amritha; Walker, Lindsay; Okan Irfanoglu, M; Albert, Paul S; Pierpaoli, Carlo

    2015-04-01

    Metrics derived from the diffusion tensor, such as fractional anisotropy (FA) and mean diffusivity (MD) have been used in many studies of postnatal brain development. A common finding of previous studies is that these tensor-derived measures vary widely even in healthy populations. This variability can be due to inherent inter-individual biological differences as well as experimental noise. Moreover, when comparing different studies, additional variability can be introduced by different acquisition protocols. In this study we examined scans of 61 individuals (aged 4-22 years) from the NIH MRI study of normal brain development. Two scans were collected with different protocols (low and high resolution). Our goal was to separate the contributions of biological variability and experimental noise to the overall measured variance, as well as to assess potential systematic effects related to the use of different protocols. We analyzed FA and MD in seventeen regions of interest. We found that biological variability for both FA and MD varies widely across brain regions; biological variability is highest for FA in the lateral part of the splenium and body of the corpus callosum along with the cingulum and the superior longitudinal fasciculus, and for MD in the optic radiations and the lateral part of the splenium. These regions with high inter-individual biological variability are the most likely candidates for assessing genetic and environmental effects in the developing brain. With respect to protocol-related effects, the lower resolution acquisition resulted in higher MD and lower FA values for the majority of regions compared with the higher resolution protocol. However, the majority of the regions did not show any age-protocol interaction, indicating similar trajectories were obtained irrespective of the protocol used.

  18. A Trajectory Analysis of Alcohol and Marijuana Use Among Latino Adolescents in San Francisco, California

    PubMed Central

    McCoy, Sandra I.; Jewell, Nicholas P.; Hubbard, Alan; Gerdts, Caitlin E.; Doherty, Irene A.; Padian, Nancy S.; Minnis, Alexandra M.

    2014-01-01

    Purpose We examined alcohol and marijuana use trajectories among Latino adolescents in the San Francisco Bay Area. Methods A total of 410 Latino adolescents aged 14–19 years were recruited from community venues from years 2001 to 2004 and followed up for 2 years. In separate models, we identified groups with similar temporal patterns of alcohol and marijuana use using semi-parametric latent group trajectory modeling. Multivariable multinomial logistic regression was used to identify factors associated with the probability of trajectory group membership. Results The use of alcohol (76%) and marijuana (55%) in the previous 6 months was common. Three alcohol-use trajectories were identified: low users (18%), moderate users (37%), and frequent users (45%). Low alcohol users (vs. moderate users) were found to be younger in age, preferred Spanish language, and had more parental monitoring. Frequent users were more likely to be male, sexually active, gang exposed, and have less parental monitoring than moderate users. Similarly, three marijuana-use trajectories were identified: low users (36%), moderate users (35%), and frequent users (28%), with similar correlates of group membership. Conclusions Urban Latino adolescents’ substance use is shaped by complex cultural and environmental influences. Patterns of substance use emerge by early adolescence highlighting the need for timely intervention. PMID:21094433

  19. Air-breathing hypersonic vehicle guidance and control studies: An integrated trajectory/control analysis methodology, phase 2

    NASA Technical Reports Server (NTRS)

    Hattis, Philip D.; Malchow, Harvey L.

    1992-01-01

    An integrated trajectory/control analysis algorithm has been used to generate trajectories and desired control strategies for two different hypersonic air-breathing vehicle models and orbit targets. Both models used cubic spline curve fit tabulated winged-cone accelerator vehicle representations. Near-fuel-optimal, horizontal takeoff trajectories, imposing a dynamic pressure limit of 1000 psf, were developed. The first model analysis case involved a polar orbit and included the dynamic effects of using elevons to maintain longitudinal trim. Analysis results indicated problems with the adequacy of the propulsion model and highlighted dynamic pressure/altitude instabilities when using vehicle angle of attack as a control variable. Also, the magnitude of computed elevon deflections to maintain trim suggested a need for alternative pitch moment management strategies. The second analysis case was reformulated to use vehicle pitch attitude relative to the local vertical as the control variable. A new, more realistic, air-breathing propulsion model was incorporated. Pitch trim calculations were dropped and an equatorial orbit was specified. Changes in flight characteristics due to the new propulsion model have been identified. Flight regimes demanding rapid attitude changes have been noted. Also, some issues that would affect design of closed-loop controllers were ascertained.

  20. On trajectory generation for flexible space crane: Inverse dynamics analysis by LATDYN

    NASA Technical Reports Server (NTRS)

    Chen, G.-S.; Housner, J. M.; Wu, S.-C.; Chang, C.-W.

    1989-01-01

    For future in-space construction facility, one or more space cranes capable of manipulating and positioning large and massive spacecraft components will be needed. Inverse dynamics was extensively studied as a basis for trajectory generation and control of robot manipulators. The focus here is on trajectory generation in the gross-motion phase of space crane operation. Inverse dynamics of the flexible crane body is much more complex and intricate as compared with rigid robot link. To model and solve the space crane's inverse dynamics problem, LATDYN program which employs a three-dimensional finite element formulation for the multibody truss-type structures will be used. The formulation is oriented toward a joint dominated structure which is suitable for the proposed space crane concept. To track a planned trajectory, procedures will be developed to obtain the actuation profile and dynamics envelope which are pertinent to the design and performance requirements of the space crane concept.

  1. Analysis of Single Locus Trajectories for Extracting In Vivo Chromatin Tethering Interactions

    PubMed Central

    Amitai, Assaf; Toulouze, Mathias; Dubrana, Karine; Holcman, David

    2015-01-01

    Is it possible to extract tethering forces applied on chromatin from the statistics of a single locus trajectories imaged in vivo? Chromatin fragments interact with many partners such as the nuclear membrane, other chromosomes or nuclear bodies, but the resulting forces cannot be directly measured in vivo. However, they impact chromatin dynamics and should be reflected in particular in the motion of a single locus. We present here a method based on polymer models and statistics of single trajectories to extract the force characteristics and in particular when they are generated by the gradient of a quadratic potential well. Using numerical simulations of a Rouse polymer and live cell imaging of the MAT-locus located on the yeast Saccharomyces cerevisiae chromosome III, we recover the amplitude and the distance between the observed and the interacting monomer. To conclude, the confined trajectories we observed in vivo reflect local interaction on chromatin. PMID:26317360

  2. Arnold Aberman, MD.

    PubMed

    Aberman, A

    1995-10-01

    When the United States embarked on its effort to provide universal health insurance, the Canadian Medicare System was cited as a possible model for American health care. Often touted as an example of low-cost, high quality medicine, the Canadian system has mirrored the problems of health care across its southern border. With rocketing health care expenditures and financing having largely been decentralized to the individual provinces, local officials have struggled to cut costs and services. A central focus of these efforts has been a move to decrease the numbers of physicians, most notably a 10% decrease in medical school class size in 1993. While some Western provinces have experimented with the privatization of health care, the Canadian system still remains the epitome of government operated fee-for-service medicine. Given the likelihood of dramatic change in the American Medicare system, Canadian academic centers offer a unique perspective on the impact of capitation, evolving relationships with government payors, and the flip side of market oriented reforms. At the helm of one of Canada's largest schools is Arnold Aberman, MD, dean of the University of Toronto Faculty of Medicine. Born in Montreal, Quebec, Aberman received his MD from McGill University, but then did his residency both in Canada and the US, followed by a pulmonary fellowship at Albert Einstein College of Medicine and the Cardiovascular Research Institute of the University of California, San Francisco. Interviewed at his office in Toronto, Aberman reflected on the trials and tribulations confronting medicine on both sides of the 48th parallel.

  3. A Modification and Analysis of Lagrangian Trajectory Modeling and Granular Dynamics of Lunar Dust Particles

    NASA Technical Reports Server (NTRS)

    Long, Jason M.; Lane, John E.; Metzger, Philip T.

    2008-01-01

    A previously developed mathematical model is amended to more accurately incorporate the effects of lift and drag on single dust particles in order to predict their behavior in the wake of high velocity gas flow. The model utilizes output from a CFD or DSMC simulation of exhaust from a rocket nozzle hot gas jet. An extension of the Saffman equation for lift based on the research of McLaughlin (1991) and Mei (1992) is used, while an equation for the Magnus force modeled after the work of Oesterle (1994) and Tsuji et al (1985) is applied. A relationship for drag utilizing a particle shape factor (phi = 0.8) is taken from the work of Haider and Levenspiel (1989) for application to non-spherical particle dynamics. The drag equation is further adjusted to account for rarefaction and compressibility effects in rarefied and high Mach number flows according to the work of Davies (1945) and Loth (2007) respectively. Simulations using a more accurate model with the correction factor (Epsilon = 0.8 in a 20% particle concentration gas flow) given by Richardson and Zaki (1954) and Rowe (1961) show that particles have lower ejection angles than those that were previously calculated. This is more prevalent in smaller particles, which are shown through velocity and trajectory comparison to be more influenced by the flow of the surrounding gas. It is shown that particles are more affected by minor changes to drag forces than larger adjustments to lift forces, demanding a closer analysis of the shape and behavior of lunar dust particles and the composition of the surrounding gas flow.

  4. Temporal Evolution of Submarine Channel Trajectory and Mobility: Quantitative Analysis and Comparison to Rivers

    NASA Astrophysics Data System (ADS)

    Auchter, N.; Jobe, Z. R.; Howes, N. C.

    2015-12-01

    Submarine channels are the primary conduits for the transport of clastic detritus from the continents into the deep sea. During their evolution, these channels migrate, forming channel belts that record a complex history of vertical degradation, lateral migration, and vertical aggradation. Previous work drawing on seismic, outcrop, and modeled examples of submarine channel systems have qualitatively observed a significant component of vertical aggradation and a temporal trend transitioning from a phase dominated by lateral migration to one dominated by vertical aggradation. The processes that drive these changes in channel trajectory and their stratigraphic consequences remain poorly constrained. Furthermore, comparisons/contrasts between submarine channels and rivers often do not take into account the variability in channel trajectory/mobility, which clearly affects the resultant architecture. This study compiles a global dataset of >320 channel trajectory and geometry measurements derived from a global suite 2-D cross sections including 21 submarine channel systems and 13 fluvial systems. These data enable the quantitative treatment of the temporal evolution of channel trajectory/mobility as well as highlighting key differences between submarine channels and rivers. Submarine channels show a strong trend of decreasing channel mobility during their evolution, resulting in early stage lateral migration and late stage aggradation. Fluvial channels show a similar evolution, but with ~5x less aggradation and ~2x larger mobility values. Fluvial channel belts contain a large proportion of lateral accretion and have similar trajectories as early phase or degradational submarine channels, while late stage or aggradation submarine channel belts contain significantly more vertically stacked channel fill deposits. These submarine trajectory/mobility measurements provide a valuable quantitative basis for explaining the evolution of stratigraphic architecture of submarine

  5. Two types of spermine synthase gene: MdACL5 and MdSPMS are differentially involved in apple fruit development and cell growth.

    PubMed

    Kitashiba, Hiroyasu; Hao, Yu-Jin; Honda, Chikako; Moriguchi, Takaya

    2005-11-21

    Three cDNAs with high homology to spermine (Spm) synthases in Arabidopsis were isolated from apple [Malus sylvestris (L.) Mill. var. domestica (Borkh.) Mansf.]. MdACL5-1 and MdACL5-2 have high homology with ACL5 and MdSPMS has high homology with AtSPMS. The similarity of MdSPMS to spermidine synthases (SPDSs) was higher than that of MdACL5s, despite the fact that both are putative Spm synthases. However, MdSPMS could be discriminated from SPDSs by the presence of several characteristic amino acids, i.e., Val-149, Ser-161, Ala-205, and Val-235, in the decarboxylated S-adenosylmethionine (dcSAM)-binding motif of MdSPMS. Both MdACL5-1 and MdSPMS complemented Spm biosynthesis in a yeast mutant deficient in Spm synthase, and ectopic expression of MdACL5-1 in the Arabidopsis dwarf mutant acl5 allowed recovery of the normal phenotype. RNA gel blot analysis showed that MdACL5 and MdSPMS are differentially expressed in tissues and suspension cells. These results suggest that functional MdACL5 and MdSPMS are independently involved in apple fruit development and cell growth.

  6. Trajectory analysis of wet and dry deposited pollens from distant sources

    SciTech Connect

    Raynor, G S; Hayes, J V; Lewis, D M

    1981-01-01

    The purposes of this study are to determine if an available trajectory model calculates reasonable pathways from probable source regions to the sampling site and to determine the pathways and travel times involved in selected cases of long distance pollen transport. (PSB)

  7. Trajectory analysis for the lunar flyby rescue of AsiaSat-3/HGS-1.

    PubMed

    Ocampo, C

    2005-12-01

    On May 13, 1998, the Hughes Global Services 1 Spacecraft (HGS-1, originally known as AsiaSat 3) became the first commercial spacecraft to fly by the Moon on a trajectory to reposition it into a useful geosynchronous orbit. This was necessary due to the failure of the last stage of the launch vehicle that left it in a high inclination, eccentric, and unusable orbit. The spacecraft did not have enough propellant to perform the maneuvers required to place it into its intended geostationary orbit via a standard transfer trajectory. However, it did have enough propellant to place it on a trajectory that flew by the Moon twice to finally achieve a useful low inclination geosynchronous orbit. In addition to being the first commercial operation in the vicinity of the Moon, it was the last successful lunar mission of the twentieth century. We discuss of the events leading up to the start of the rescue operation that included contributions from external organizations. We also describe the analytic estimates used to construct the trajectory and provide an overview of the details of the actual mission.

  8. Trajectories of Parenting and Child Negative Emotionality during Infancy and Toddlerhood: A Longitudinal Analysis

    ERIC Educational Resources Information Center

    Lipscomb, Shannon Tierney; Leve, Leslie D.; Harold, Gordon T.; Neiderhiser, Jenae M.; Shaw, Daniel S.; Ge, Xiaojia; Reiss, David

    2011-01-01

    The current longitudinal study examined trajectories of child negative emotionality, parenting efficacy, and overreactive parenting among 382 adoptive families during infancy and toddlerhood. Data were collected from adoptive parents when the children were 9-, 18-, and 27-month-old. Latent growth curve modeling indicated age-related increases in…

  9. Latent Class Analysis of Early Developmental Trajectory in Baby Siblings of Children with Autism

    ERIC Educational Resources Information Center

    Landa, Rebecca J.; Gross, Alden L.; Stuart, Elizabeth A.; Bauman, Margaret

    2012-01-01

    Background: Siblings of children with autism (sibs-A) are at increased genetic risk for autism spectrum disorders (ASD) and milder impairments. To elucidate diversity and contour of early developmental trajectories exhibited by sibs-A, regardless of diagnostic classification, latent class modeling was used. Methods: Sibs-A (N = 204) were assessed…

  10. LONG-DISTANCE GM POLLEN MOVEMENT OF CREEPING BENTGRASS USING MODELED WIND TRAJECTORY ANALYSIS

    EPA Science Inventory

    The importance of understanding the role of atmospheric conditions in pollen dispersal has grown in recent years with increased field-testing of genetically modified (GM) crop plants. An atmospheric model was used to characterize wind trajectories at 10 m and 100 m above GM polle...

  11. Worst-error analysis of batch filter and sequential filter in navigation problems. [in spacecraft trajectory estimation

    NASA Technical Reports Server (NTRS)

    Nishimura, T.

    1975-01-01

    This paper proposes a worst-error analysis for dealing with problems of estimation of spacecraft trajectories in deep space missions. Navigation filters in use assume either constant or stochastic (Markov) models for their estimated parameters. When the actual behavior of these parameters does not follow the pattern of the assumed model, the filters sometimes result in very poor performance. To prepare for such pathological cases, the worst errors of both batch and sequential filters are investigated based on the incremental sensitivity studies of these filters. By finding critical switching instances of non-gravitational accelerations, intensive tracking can be carried out around those instances. Also the worst errors in the target plane provide a measure in assignment of the propellant budget for trajectory corrections. Thus the worst-error study presents useful information as well as practical criteria in establishing the maneuver and tracking strategy of spacecraft's missions.

  12. Childhood Growth Trajectories According to Combinations of Pregestational Weight Status and Maternal Smoking during Pregnancy: A Multilevel Analysis

    PubMed Central

    Suzuki, Kohta; Sato, Miri; Zheng, Wei; Shinohara, Ryoji; Yokomichi, Hiroshi; Yamagata, Zentaro

    2015-01-01

    Pregestational weight status and maternal smoking during pregnancy are significantly associated with fetal and childhood growth. However, few studies have examined associations between childhood growth and combinations of these factors using multilevel analysis. This study aimed to describe differences in childhood growth trajectories according to these combinations, using data from a prospective cohort study in Japan. The study participants were 1,973 women and their singletons, who were born between April 1, 1991 and March 31, 2003. Children were categorized according to whether they were born to normal-weight, nonsmoking mothers (NN); normal-weight, smoking mothers (NS); underweight, nonsmoking mothers (UN); underweight, smoking mothers (US); overweight, nonsmoking mothers (ON); or overweight, smoking mothers (OS). Birth weight and anthropometric data were collected from 1,965 children at birth (99.6%), 1,655 aged 3 (83.9%), 1,527 aged 5 (77.4%), 1,497 aged 7–8 (75.9%), and 1,501 aged 9–10 (76.1%). Multilevel analysis examining both individual and age as different level variables according to sex was used to describe the trajectories of body mass index z scores for statistical analyses. Although children of the OS group were the leanest at birth, their body mass indices had increased rapidly by 3 years of age. Moreover, body mass index was also likely to increase in boys in the NS and ON groups. A different trend was observed in girls. Body mass index decreased from 5 years of age in girls in the US group. There were no remarkable differences in body mass index trajectories between children in the other groups. In conclusion, childhood growth trajectories differed according to combinations of pregestational weight status and maternal smoking during pregnancy. Further, there were sex-related differences in the associations between childhood growth and factor combinations. PMID:25680116

  13. Childhood growth trajectories according to combinations of pregestational weight status and maternal smoking during pregnancy: a multilevel analysis.

    PubMed

    Suzuki, Kohta; Sato, Miri; Zheng, Wei; Shinohara, Ryoji; Yokomichi, Hiroshi; Yamagata, Zentaro

    2015-01-01

    Pregestational weight status and maternal smoking during pregnancy are significantly associated with fetal and childhood growth. However, few studies have examined associations between childhood growth and combinations of these factors using multilevel analysis. This study aimed to describe differences in childhood growth trajectories according to these combinations, using data from a prospective cohort study in Japan. The study participants were 1,973 women and their singletons, who were born between April 1, 1991 and March 31, 2003. Children were categorized according to whether they were born to normal-weight, nonsmoking mothers (NN); normal-weight, smoking mothers (NS); underweight, nonsmoking mothers (UN); underweight, smoking mothers (US); overweight, nonsmoking mothers (ON); or overweight, smoking mothers (OS). Birth weight and anthropometric data were collected from 1,965 children at birth (99.6%), 1,655 aged 3 (83.9%), 1,527 aged 5 (77.4%), 1,497 aged 7-8 (75.9%), and 1,501 aged 9-10 (76.1%). Multilevel analysis examining both individual and age as different level variables according to sex was used to describe the trajectories of body mass index z scores for statistical analyses. Although children of the OS group were the leanest at birth, their body mass indices had increased rapidly by 3 years of age. Moreover, body mass index was also likely to increase in boys in the NS and ON groups. A different trend was observed in girls. Body mass index decreased from 5 years of age in girls in the US group. There were no remarkable differences in body mass index trajectories between children in the other groups. In conclusion, childhood growth trajectories differed according to combinations of pregestational weight status and maternal smoking during pregnancy. Further, there were sex-related differences in the associations between childhood growth and factor combinations.

  14. John M. Eisenberg, MD.

    PubMed

    Eisenberg, J M

    1995-08-01

    The complicated interaction between government, academic medical centers, health care payers, and burgeoning market forces has tested the leadership skills of a generation of academicians with little formal training in economics. The emergence of a new breed of physician investigator with solid business credentials has therefore proved attractive to many segments of the medical community. John M. Eisenberg received his MD from Washington University in 1972, his MBA from the Wharton School in 1976, and shortly thereafter headed the division of general internal medicine at the University of Pennsylvania. In addition to championing the role of the generalist in health care delivery, Eisenberg has also played a major part in the reformation of Medicare reimbursement. He has been a commissioner on the Congressional Physician Payment Review Commission since 1986, serving as chairman since 1993. After assuming the chairmanship of the department of medicine at Georgetown University in 1992, Eisenberg served as an advisor to the Clinton administration during its efforts towards national health care reform. Interviewed in his office in Georgetown, Eisenberg reflected on the economic forces twisting post-graduate medical education, the role of non-physician providers in future health care delivery, and the evolving relationship between specialists and generalists. PMID:7552581

  15. Corresponding Functional Dynamics across the Hsp90 Chaperone Family: Insights from a Multiscale Analysis of MD Simulations

    PubMed Central

    Morra, Giulia; Potestio, Raffaello; Micheletti, Cristian; Colombo, Giorgio

    2012-01-01

    Understanding how local protein modifications, such as binding small-molecule ligands, can trigger and regulate large-scale motions of large protein domains is a major open issue in molecular biology. We address various aspects of this problem by analyzing and comparing atomistic simulations of Hsp90 family representatives for which crystal structures of the full length protein are available: mammalian Grp94, yeast Hsp90 and E.coli HtpG. These chaperones are studied in complex with the natural ligands ATP, ADP and in the Apo state. Common key aspects of their functional dynamics are elucidated with a novel multi-scale comparison of their internal dynamics. Starting from the atomic resolution investigation of internal fluctuations and geometric strain patterns, a novel analysis of domain dynamics is developed. The results reveal that the ligand-dependent structural modulations mostly consist of relative rigid-like movements of a limited number of quasi-rigid domains, shared by the three proteins. Two common primary hinges for such movements are identified. The first hinge, whose functional role has been demonstrated by several experimental approaches, is located at the boundary between the N-terminal and Middle-domains. The second hinge is located at the end of a three-helix bundle in the Middle-domain and unfolds/unpacks going from the ATP- to the ADP-state. This latter site could represent a promising novel druggable allosteric site common to all chaperones. PMID:22457611

  16. Nonlinear trajectory navigation

    NASA Astrophysics Data System (ADS)

    Park, Sang H.

    Trajectory navigation entails the solution of many different problems that arise due to uncertain knowledge of the spacecraft state, including orbit prediction, correction maneuver design, and trajectory estimation. In practice, these problems are usually solved based on an assumption that linear dynamical models sufficiently approximate the local trajectory dynamics and their associated statistics. However, astrodynamics problems are nonlinear in general and linear spacecraft dynamics models can fail to characterize the true trajectory dynamics when the system is subject to a highly unstable environment or when mapped over a long time period. This limits the performance of traditional navigation techniques and can make it difficult to perform precision analysis or robust navigation. This dissertation presents an alternate method for spacecraft trajectory navigation based on a nonlinear local trajectory model and their statistics in an analytic framework. For a given reference trajectory, we first solve for the higher order Taylor series terms that describe the localized nonlinear motion and develop an analytic expression for the relative solution flow. We then discuss the nonlinear dynamical mapping of a spacecraft's probability density function by solving the Fokker-Planck equation for a deterministic system. From this result we derive an analytic method for orbit uncertainty propagation which can replicate Monte-Carlo simulations with the benefit of added flexibility in initial orbit statistics. Using this approach, we introduce the concept of the statistically correct trajectory where we directly incorporate statistical information about an orbit state into the trajectory design process. As an extension of this concept, we define a nonlinear statistical targeting method where we solve for a correction maneuver which intercepts the desired target on average. Then we apply our results to a Bayesian filtering problem to obtain a general filtering algorithm for

  17. Design of cycler trajectories and analysis of solar influences on radioactive decay rates during space missions

    NASA Astrophysics Data System (ADS)

    Rogers, Blake A.

    This thesis investigates the design of interplanetary missions for the continual habitation of Mars via Earth-Mars cyclers and for the detection of variations in nuclear decay rates due to solar influences. Several cycler concepts have been proposed to provide safe and comfortable quarters for astronauts traveling between the Earth and Mars. However, no literature has appeared to show how these massive vehicles might be placed into their cycler trajectories. Trajectories are designed that use either Vinfinity leveraging or low thrust to establish cycler vehicles in their desired orbits. In the cycler trajectory cases considered, the use of Vinfinity leveraging or low thrust substantially reduces the total propellant needed to achieve the cycler orbit compared to direct orbit insertion. In the case of the classic Aldrin cycler, the propellant savings due to Vinfinity leveraging can be as large as a 24 metric ton reduction for a cycler vehicle with a dry mass of 75 metric tons, and an additional 111 metric ton reduction by instead using low thrust. The two-synodic period cyclers considered benefit less from Vinfinity leveraging, but have a smaller total propellant mass due to their lower approach velocities at Earth and Mars. It turns out that, for low-thrust establishment, the propellant required is approximately the same for each of the cycler trajectories. The Aldrin cycler has been proposed as a transportation system for human missions between Earth and Mars. However, the hyperbolic excess velocity values at the planetary encounters for these orbits are infeasibly large, especially at Mars. In a new version of the Aldrin cycler, low thrust is used in the interplanetary trajectories to reduce the encounter velocities. Reducing the encounter velocities at both planets reduces the propellant needed by the taxis (astronauts use these taxis to transfer between the planetary surfaces and the cycler vehicle) to perform hyperbolic rendezvous. While the propellant

  18. Mortality trajectory analysis reveals the drivers of sex-specific epidemiology in natural wildlife–disease interactions

    PubMed Central

    McDonald, Jennifer L.; Smith, Graham C.; McDonald, Robbie A.; Delahay, Richard J.; Hodgson, Dave

    2014-01-01

    In animal populations, males are commonly more susceptible to disease-induced mortality than females. However, three competing mechanisms can cause this sex bias: weak males may simultaneously be more prone to exposure to infection and mortality; being ‘male’ may be an imperfect proxy for the underlying driver of disease-induced mortality; or males may experience increased severity of disease-induced effects compared with females. Here, we infer the drivers of sex-specific epidemiology by decomposing fixed mortality rates into mortality trajectories and comparing their parameters. We applied Bayesian survival trajectory analysis to a 22-year longitudinal study of a population of badgers (Meles meles) naturally infected with bovine tuberculosis (bTB). At the point of infection, infected male and female badgers had equal mortality risk, refuting the hypothesis that acquisition of infection occurs in males with coincidentally high mortality. Males and females exhibited similar levels of heterogeneity in mortality risk, refuting the hypothesis that maleness is only a proxy for disease susceptibility. Instead, sex differences were caused by a more rapid increase in male mortality rates following infection. Males are indeed more susceptible to bTB, probably due to immunological differences between the sexes. We recommend this mortality trajectory approach for the study of infection in animal populations. PMID:25056621

  19. Optimal trajectories for the aeroassisted flight experiment. Part 3: Formulation, results, and analysis

    NASA Technical Reports Server (NTRS)

    Miele, A.; Wang, T.; Lee, W. Y.; Zhao, Z. G.

    1989-01-01

    The determination of optimal trajectories for the aero-assisted flight experiment (AFE) is investigated. The intent of this experiment is to simulate a GEO-to-LEO transfer, where GEO denotes a geosynchronous Earth orbit and LEO denotes a low Earth orbit. The trajectories of an AFE spacecraft are analyzed in a 3D-space, employing the full system of 6 ODEs describing the atmospheric pass. The atmospheric entry conditions are given, and the atmospheric exit conditions are adjusted in such a way that the following conditions are satisfied: (1) the atmospheric velocity depletion is such that, after exiting, the AFE spacecraft first ascends to a specified apogee and then descends to a specified perigee; and (2) the exit orbital plane is identical with the entry orbital plane. The final maneuver, not analyzed here, includes the rendezvous with and the capture by the space shuttle.

  20. Trajectory design and navigation analysis for Cargo Transfer Vehicle proximity operations

    NASA Astrophysics Data System (ADS)

    Marsh, S. M.; White, B. D.

    1992-08-01

    The paper documents an investigation of alternative (or off-nominal) final approach trajectories and terminal guidance algorithms for Cargo Transfer Vehicle (CTV) automated rendezvous and proximity operation in the vicinity of Space Station Freedom (SSF). Ten candidate trajectory designs, representing a survey of all approaches that reasonably satisfy the mission constraints, are compared qualitatively and quantitatively. It is shown that several fundamentally different types of approach strategies are feasible in the CTV application and enjoy more favorable passive collision avoidance and plume impingement properties than the nominal. They are, however, generally more costly in propellant. The extent to which an alternative approach is more costly is determined largely by the abort (or specifically the 'hold' or 'wave-off') requirements. These approach techniques are verified in a software simulation using a parametrically defined candidate navigation system, and proximity sensor accuracy requirements are derived.

  1. Trajectory and System Analysis For Outer-Planet Solar-Electric Propulsion Missions

    NASA Technical Reports Server (NTRS)

    Cupples, Michael; Woo, Byoungsam; Coverstone, Victoria L.; Hartmann, John W.

    2004-01-01

    Outer-planet mission and systems analyses are performed using three next generation solar-electric ion thruster models. The impact of variations in thruster model, flight time, launch vehicle, propulsion and power systems characteristics is investigated. All presented trajectories have a single Venus gravity assist and maximize the delivered mass to Saturn or Neptune. The effect of revolution ratio - the ratio of Venusian orbital period to the flight time between launch and flyby dates - is also discussed.

  2. Trajectories of Organized Activity Participation Among Urban Adolescents: An Analysis of Predisposing Factors.

    PubMed

    Eisman, Andria B; Stoddard, Sarah A; Bauermeister, José A; Caldwell, Cleopatra H; Zimmerman, Marc A

    2016-01-01

    Organized activity participation provides important opportunities for adolescents to develop assets and resources related to positive youth development. Predisposing factors, in addition to sociodemographics and self-selection factors, may influence how youth participate over time. In this study, we used growth mixture modeling with longitudinal data from African American adolescents attending urban high schools in Flint, MI to identify subgroups of participation trajectories (Wave 1 N = 681, mean age at Wave 1 = 14.86 years, 51% female). We measured activity participation using psychological and behavioral engagement across multiple contexts over the 4 years of high school. We examined how predisposing risk and promotive factors were related to these trajectories, accounting for sociodemographic and self-selection factors. The results indicated three participation trajectories: a low group decreasing over time (74%), a moderate, consistent participation group (21%) and a moderate, increasing group (5%). More substance use was associated with lower odds of being in the moderate/consistent versus low/decreasing participation group. More parental support was associated with lower odds of being in the moderate/increasing versus the moderate/consistent group. Our results suggest that addressing predisposing factors such as substance use may help facilitate participation over time.

  3. Reconstructing folding energy landscapes from splitting probability analysis of single-molecule trajectories

    PubMed Central

    Manuel, Ajay P.; Lambert, John; Woodside, Michael T.

    2015-01-01

    Structural self-assembly in biopolymers, such as proteins and nucleic acids, involves a diffusive search for the minimum-energy state in a conformational free-energy landscape. The likelihood of folding proceeding to completion, as a function of the reaction coordinate used to monitor the transition, can be described by the splitting probability, pfold(x). Pfold encodes information about the underlying energy landscape, and it is often used to judge the quality of the reaction coordinate. Here, we show how pfold can be used to reconstruct energy landscapes from single-molecule folding trajectories, using force spectroscopy measurements of single DNA hairpins. Calculating pfold(x) directly from trajectories of the molecular extension measured for hairpins fluctuating in equilibrium between folded and unfolded states, we inverted the result expected from diffusion over a 1D energy landscape to obtain the implied landscape profile. The results agreed well with the landscapes reconstructed by established methods, but, remarkably, without the need to deconvolve instrumental effects on the landscape, such as tether compliance. The same approach was also applied to hairpins with multistate folding pathways. The relative insensitivity of the method to the instrumental compliance was confirmed by simulations of folding measured with different tether stiffnesses. This work confirms that the molecular extension is a good reaction coordinate for these measurements, and validates a powerful yet simple method for reconstructing landscapes from single-molecule trajectories. PMID:26039984

  4. Assessing randomness and complexity in human motion trajectories through analysis of symbolic sequences

    PubMed Central

    Peng, Zhen; Genewein, Tim; Braun, Daniel A.

    2014-01-01

    Complexity is a hallmark of intelligent behavior consisting both of regular patterns and random variation. To quantitatively assess the complexity and randomness of human motion, we designed a motor task in which we translated subjects' motion trajectories into strings of symbol sequences. In the first part of the experiment participants were asked to perform self-paced movements to create repetitive patterns, copy pre-specified letter sequences, and generate random movements. To investigate whether the degree of randomness can be manipulated, in the second part of the experiment participants were asked to perform unpredictable movements in the context of a pursuit game, where they received feedback from an online Bayesian predictor guessing their next move. We analyzed symbol sequences representing subjects' motion trajectories with five common complexity measures: predictability, compressibility, approximate entropy, Lempel-Ziv complexity, as well as effective measure complexity. We found that subjects' self-created patterns were the most complex, followed by drawing movements of letters and self-paced random motion. We also found that participants could change the randomness of their behavior depending on context and feedback. Our results suggest that humans can adjust both complexity and regularity in different movement types and contexts and that this can be assessed with information-theoretic measures of the symbolic sequences generated from movement trajectories. PMID:24744716

  5. Trajectory-Based Analysis of Urban Land-Cover Change Detection

    NASA Astrophysics Data System (ADS)

    Zhang, Y. H.; Liu, H. P.

    2016-06-01

    China have occurred unprecedented urban growth over the last two decades. It is reported that the level of China's urbanization increased from 18 % in 1978 to 41 % in 2003, and this figure may exceed 65 % by 2050. The change detection of long time serious remote sensing images is the effective way to acquire the data of urban land-cover change to understand the pattern of urbanization. In this paper, we proposed the similarity index (SI) and apply it in long time series urban land-cover change detection. First of all, we built possible change trajectories in four times based on the normalized difference vegetation index (NDVI) and modified normalized difference water index (MNDWI) that extracted from time series Landsat images. Secondly, we applied SI in similarity comparison between the observed change trajectory and the possible trajectories. Lastly, verifying the accuracy of the results. The overall accuracy in four periods is 85.7 % and the overall accuracy of each two years is about 90 % and kappa statistic is about 0.85. The results show that this method is effective for time series land-cover change detection.

  6. SU-E-T-144: Effective Analysis of VMAT QA Generated Trajectory Log Files for Medical Accelerator Predictive Maintenance

    SciTech Connect

    Able, CM; Baydush, AH; Nguyen, C; Munley, MT; Gersh, J; Ndlovu, A; Rebo, I; Booth, J; Perez, M; Sintay, B

    2014-06-01

    Purpose: To determine the effectiveness of SPC analysis for a model predictive maintenance process that uses accelerator generated parameter and performance data contained in trajectory log files. Methods: Each trajectory file is decoded and a total of 131 axes positions are recorded (collimator jaw position, gantry angle, each MLC, etc.). This raw data is processed and either axis positions are extracted at critical points during the delivery or positional change over time is used to determine axis velocity. The focus of our analysis is the accuracy, reproducibility and fidelity of each axis. A reference positional trace of the gantry and each MLC is used as a motion baseline for cross correlation (CC) analysis. A total of 494 parameters (482 MLC related) were analyzed using Individual and Moving Range (I/MR) charts. The chart limits were calculated using a hybrid technique that included the use of the standard 3σ limits and parameter/system specifications. Synthetic errors/changes were introduced to determine the initial effectiveness of I/MR charts in detecting relevant changes in operating parameters. The magnitude of the synthetic errors/changes was based on: TG-142 and published analysis of VMAT delivery accuracy. Results: All errors introduced were detected. Synthetic positional errors of 2mm for collimator jaw and MLC carriage exceeded the chart limits. Gantry speed and each MLC speed are analyzed at two different points in the delivery. Simulated Gantry speed error (0.2 deg/sec) and MLC speed error (0.1 cm/sec) exceeded the speed chart limits. Gantry position error of 0.2 deg was detected by the CC maximum value charts. The MLC position error of 0.1 cm was detected by the CC maximum value location charts for every MLC. Conclusion: SPC I/MR evaluation of trajectory log file parameters may be effective in providing an early warning of performance degradation or component failure for medical accelerator systems.

  7. Trajectories of recovery among homeless adults with mental illness who participated in a randomised controlled trial of Housing First: a longitudinal, narrative analysis

    PubMed Central

    Patterson, Michelle L; Rezansoff, Stefanie; Currie, Lauren; Somers, Julian M

    2013-01-01

    Objectives This study used longitudinal, narrative data to identify trajectories of recovery among homeless adults with mental illness alongside the factors that contribute to positive, negative, mixed or neutral trajectories over time. We expected that participants who received Housing First (HF) would describe more positive trajectories of recovery than those who were assigned to Treatment as Usual (TAU; no housing or support provided through the study). Design Narrative interview data were collected from participants at baseline and 18 months after random assignment to HF or TAU. Setting Participants were sampled from the community in Vancouver, British Columbia. Participants Fifty-four participants were randomly and purposively selected from the larger trial; 52 were interviewed at baseline and 43 were reinterviewed 18 months after randomisation. Method Semistructured interviews were conducted at both time points. For each participant, paired baseline and follow-up narratives were classified as positive, negative, mixed or neutral trajectories of recovery, and thematic analysis was used to identify the factors underlying different trajectories. Results Participants assigned to HF (n=28) were generally classified as positive or mixed trajectories; those assigned to TAU (n=15) were generally classified as neutral or negative trajectories. Positive trajectories were characterised by a range of benefits associated with good-quality, stable housing (eg, reduced substance use, greater social support), positive expressions of identity and the willingness to self-reflect. Negative, neutral and mixed trajectories were characterised by hopelessness (‘things will never get better’) related to continued hardship (eg, eviction, substance use problems), perceived failures and loss. Conclusions HF is associated with positive trajectories of recovery among homeless adults with mental illness. Those who did not receive housing or support continued to struggle across a

  8. Trajectories of Suicidal Ideation in People Seeking Web-Based Help for Suicidality: Secondary Analysis of a Dutch Randomized Controlled Trial

    PubMed Central

    van Spijker, Bregje; Karstoft, Karen-Inge; Nordentoft, Merete; Kerkhof, Ad JFM

    2016-01-01

    Background Suicidal ideation (SI) is a common mental health problem. Variability in intensity of SI over time has been linked to suicidal behavior, yet little is known about the temporal course of SI. Objective The primary aim was to identify prototypical trajectories of SI in the general population and, secondarily, to examine whether receiving Web-based self-help for SI, psychiatric symptoms, or sociodemographics predicted membership in the identified SI trajectories. Methods We enrolled 236 people, from the general Dutch population seeking Web-based help for SI, in a randomized controlled trial comparing a Web-based self-help for SI group with a control group. We assessed participants at inclusion and at 2, 4, and 6 weeks. The Beck Scale for Suicide Ideation was applied at all assessments and was included in latent growth mixture modeling analysis to empirically identify trajectories. Results We identified 4 SI trajectories. The high stable trajectory represented 51.7% (122/236) of participants and was characterized by constant high level of SI. The high decreasing trajectory (50/236, 21.2%) consisted of people with a high baseline SI score followed by a gradual decrease to a very low score. The third trajectory, high increasing (12/236, 5.1%), also had high initial SI score, followed by an increase to the highest level of SI at 6 weeks. The fourth trajectory, low stable (52/236, 22.0%) had a constant low level of SI. Previous attempted suicide and having received Web-based self-help for SI predicted membership in the high decreasing trajectory. Conclusions Many adults experience high persisting levels of SI, though results encouragingly indicate that receiving Web-based self-help for SI increased membership in a decreasing trajectory of SI. PMID:27363482

  9. Mission objectives and trajectories

    NASA Technical Reports Server (NTRS)

    1973-01-01

    The present state of the knowledge of asteroids was assessed to identify mission and target priorities for planning asteroidal flights in the 1980's and beyond. Mission objectives, mission analysis, trajectory studies, and cost analysis are discussed. A bibliography of reports and technical memoranda is included.

  10. Analysis of the Trajectory of Drosophila melanogaster in a Circular Open Field Arena

    PubMed Central

    Valente, Dan; Golani, Ilan; Mitra, Partha P.

    2007-01-01

    Background Obtaining a complete phenotypic characterization of a freely moving organism is a difficult task, yet such a description is desired in many neuroethological studies. Many metrics currently used in the literature to describe locomotor and exploratory behavior are typically based on average quantities or subjectively chosen spatial and temporal thresholds. All of these measures are relatively coarse-grained in the time domain. It is advantageous, however, to employ metrics based on the entire trajectory that an organism takes while exploring its environment. Methodology/Principal Findings To characterize the locomotor behavior of Drosophila melanogaster, we used a video tracking system to record the trajectory of a single fly walking in a circular open field arena. The fly was tracked for two hours. Here, we present techniques with which to analyze the motion of the fly in this paradigm, and we discuss the methods of calculation. The measures we introduce are based on spatial and temporal probability distributions and utilize the entire time-series trajectory of the fly, thus emphasizing the dynamic nature of locomotor behavior. Marginal and joint probability distributions of speed, position, segment duration, path curvature, and reorientation angle are examined and related to the observed behavior. Conclusions/Significance The measures discussed in this paper provide a detailed profile of the behavior of a single fly and highlight the interaction of the fly with the environment. Such measures may serve as useful tools in any behavioral study in which the movement of a fly is an important variable and can be incorporated easily into many setups, facilitating high-throughput phenotypic characterization. PMID:17957265

  11. Quantitative analysis of human walking trajectory on a circular path in darkness.

    PubMed

    Takei, Y; Grasso, R; Berthoz, A

    1996-01-01

    Thirteen normal (eight young and five older) subjects and a patient who was removed left sided acoustic neurinoma were tested to walk blindfolded along circular paths. They were asked to walk completing two revolutions and to stop when they judged they had returned to the initial position with their head faced to the initial directions. Movements of two markers on the subjects head were recorded by three dimensional motion analyzing system (ELITE system) at 50 Hz which allowed us to measure (a) total walked distance, (b) average radius of the trajectory, and (c) cumulative angle of rotation. Eight young subjects were tested on three circles with radii 0.5, 0.9, and 1.15 m, in two conditions (control, and with mental arythmetic), only to clockwise direction. Five older subjects and a patient were tested on a circle of 0.9 m radius in two conditions, but to both directions, counterclockwise and clockwise. Walked trajectories of young subjects were smooth, whereas those of older subjects tended to be polygonal. Young subjects overshot the ideal distance (6.6%) and ideal radius (9.5%), whereas they undershot the ideal angle (5.1%). There was no effect of circle size or condition on these variables. On the other hand, there was a significant effect of condition on average radius in the older group. The performance of older subjects seemed to be affected by the concurrent mental task. Comparing the counterclockwise walk, the older subjects undershot the turning angle much more than the young subjects which suggest deficits in the vestibular function with aging. The patient showed larger radius and smaller angle while she turned to the healthy side (clockwise) than to the affected side (counterclockwise). Lack of unilateral vestibular information seemed to have affected the circular walking trajectory.

  12. [The trajectory towards alternative medicines: an analysis of health professionals' social representations].

    PubMed

    Queiroz, M S

    2000-01-01

    This article focuses on social representations of alternative medicines by a group of professors from the School of Medicine and health professionals from the public health system in the city of Campinas, São Paulo, basically physicians and nurses. The article also emphasizes personal trajectories by which these health professionals opted for a dissident theoretical and practical perspective vis-à-vis the hegemonic positivist scientific medical paradigm. The research methods were mainly ethnographic, from a phenomenological perspective. The article concludes by sustaining (in theoretical terms) the importance of these dissident perspectives for scientific development.

  13. Trajectory analysis for solar electric propulsion stage /SEPS/ out-of-ecliptic mission

    NASA Technical Reports Server (NTRS)

    Dazzo, E. J.

    1975-01-01

    It is planned to use the SEPS as the upper stage of a transportation system capable of delivering either a separable payload spacecraft or an attached science package to a host of planetary targets including inner and outer planets, asteroids, and comets. It may also be employed in earth orbit to deliver and retrieve payloads in geosynchronous orbit. An investigation is conducted regarding the use of the SEPS for a relatively high energy out-of-ecliptic mission planned for 1980. Parametric performance data for the mission are considered along with trajectory characteristics, launch vehicle performance, and SEPS performance.

  14. Analysis of total least squares in estimating the parameters of a mortar trajectory

    SciTech Connect

    Lau, D.L.; Ng, L.C.

    1994-12-01

    Least Squares (LS) is a method of curve fitting used with the assumption that error exists in the observation vector. The method of Total Least Squares (TLS) is more useful in cases where there is error in the data matrix as well as the observation vector. This paper describes work done in comparing the LS and TLS results for parameter estimation of a mortar trajectory based on a time series of angular observations. To improve the results, we investigated several derivations of the LS and TLS methods, and early findings show TLS provided slightly, 10%, improved results over the LS method.

  15. Loneliness trajectories.

    PubMed

    van Dulmen, Manfred H M; Goossens, Luc

    2013-12-01

    This special section brings together five studies using group-based modeling to capture developmental trajectories of loneliness from age 7 through age 20. Together, the findings from these studies provide further evidence that developmental trajectories of loneliness are likely not best understood at a continuum but reflect distinct subpopulations that differ both where they start out and how they change over time in terms of mean levels of loneliness. Furthermore, adolescents who show chronically high loneliness or increasing loneliness over time exhibit poorer psychological and physical health, including greater incidence of depressive symptoms and more frequent suicide attempts. The findings from these studies also suggest that individuals experiencing increases in loneliness with age fare worse as well in terms of both physical and psychological health.

  16. Cosmic ray particle dosimetry and trajectory tracing. [cosmic ray track analysis for Apollo 17 BIOCORE

    NASA Technical Reports Server (NTRS)

    Cruty, M. R.; Benton, E. V.; Turnbill, C. E.; Philpott, D. E.

    1975-01-01

    Five pocket mice (Perognathus longimembris) were flown on Apollo XVII, each with a solid-state (plastic) nuclear track detector implanted beneath its scalp. The subscalp detectors were sensitive to HZE cosmic ray particles with a LET greater than or approximately equal to 0.15 million electron volts per micrometer (MeV/micron). A critical aspect of the dosimetry of the experiment involved tracing individual particle trajectories through each mouse head from particle tracks registered in the individual subscalp detectors, thereby establishing a one-to-one correspondence between a trajectory location in the tissue and the presence or absence of a lesion. The other major aspect was the identification of each registered particle. An average of 16 particles with Z greater than or equal to 6 and 2.2 particles with Z greater than or equal to 20 were found per detector. The track density, 29 tracks/sq cm, when adjusted for detection volume, was in agreement with the photographic emulsion data from an area dosimeter located next to the flight package.

  17. Gradient trajectory analysis of the scalar superlayer in a jet flow

    NASA Astrophysics Data System (ADS)

    Gampert, Markus; Schaefer, Philip; Peters, Norbert

    2012-11-01

    Based on planar high-speed Rayleigh scattering measurements of the mass fraction of propane discharging from a turbulent round jet into co-flowing carbon dioxide at nozzle based Reynolds numbers Re0 = 3 , 000 - 8 , 600 , we investigate the scalar superlayer. The latter is located between the fully turbulent part of the jet and the outer flow and has the so called turbulent/non-turbulent interface embedded within it. It is termed in analogy to the laminar superlayer introduced by Corrsin and Kistler (NACA Report 1244, 1955). Using scalar gradient trajectories, we partition the turbulent scalar field into the afore mentioned three regions according to an approach developed by Mellado et al. (J. Fluid Mech. 626:333-365, 2009) based on which we in a next step investigate conditioned zonal statistics of the scalar pdf as well as the scalar difference along the trajectory and its mean scalar value. Finally, we relate our results for the scalar superlayer on the one hand to the findings made in other experimental and numerical studies of the turbulent/non-turbulent interface and discuss them on the other hand in the context of the flamelet approach in turbulent non-premixed combustion. This work was funded by the Cluster of Excellence ``Tailor-Made Fuels from Biomass,'' which is funded by the Excellence Initiative of the German federal state governments to promote science and research at German universities.

  18. Trajectory Reconstruction and Uncertainty Analysis Using Mars Science Laboratory Pre-Flight Scale Model Aeroballistic Testing

    NASA Technical Reports Server (NTRS)

    Lugo, Rafael A.; Tolson, Robert H.; Schoenenberger, Mark

    2013-01-01

    As part of the Mars Science Laboratory (MSL) trajectory reconstruction effort at NASA Langley Research Center, free-flight aeroballistic experiments of instrumented MSL scale models was conducted at Aberdeen Proving Ground in Maryland. The models carried an inertial measurement unit (IMU) and a flush air data system (FADS) similar to the MSL Entry Atmospheric Data System (MEADS) that provided data types similar to those from the MSL entry. Multiple sources of redundant data were available, including tracking radar and on-board magnetometers. These experimental data enabled the testing and validation of the various tools and methodologies that will be used for MSL trajectory reconstruction. The aerodynamic parameters Mach number, angle of attack, and sideslip angle were estimated using minimum variance with a priori to combine the pressure data and pre-flight computational fluid dynamics (CFD) data. Both linear and non-linear pressure model terms were also estimated for each pressure transducer as a measure of the errors introduced by CFD and transducer calibration. Parameter uncertainties were estimated using a "consider parameters" approach.

  19. Development of Advanced Methods of Structural and Trajectory Analysis for Transport Aircraft

    NASA Technical Reports Server (NTRS)

    Ardema, Mark D.; Windhorst, Robert; Phillips, James

    1998-01-01

    This paper develops a near-optimal guidance law for generating minimum fuel, time, or cost fixed-range trajectories for supersonic transport aircraft. The approach uses a choice of new state variables along with singular perturbation techniques to time-scale decouple the dynamic equations into multiple equations of single order (second order for the fast dynamics). Application of the maximum principle to each of the decoupled equations, as opposed to application to the original coupled equations, avoids the two point boundary value problem and transforms the problem from one of a functional optimization to one of multiple function optimizations. It is shown that such an approach produces well known aircraft performance results such as minimizing the Brequet factor for minimum fuel consumption and the energy climb path. Furthermore, the new state variables produce a consistent calculation of flight path angle along the trajectory, eliminating one of the deficiencies in the traditional energy state approximation. In addition, jumps in the energy climb path are smoothed out by integration of the original dynamic equations at constant load factor. Numerical results performed for a supersonic transport design show that a pushover dive followed by a pullout at nominal load factors are sufficient maneuvers to smooth the jump.

  20. Multinomial logistic regression analysis for differentiating 3 treatment outcome trajectory groups for headache-associated disability.

    PubMed

    Lewis, Kristin Nicole; Heckman, Bernadette Davantes; Himawan, Lina

    2011-08-01

    Growth mixture modeling (GMM) identified latent groups based on treatment outcome trajectories of headache disability measures in patients in headache subspecialty treatment clinics. Using a longitudinal design, 219 patients in headache subspecialty clinics in 4 large cities throughout Ohio provided data on their headache disability at pretreatment and 3 follow-up assessments. GMM identified 3 treatment outcome trajectory groups: (1) patients who initiated treatment with elevated disability levels and who reported statistically significant reductions in headache disability (high-disability improvers; 11%); (2) patients who initiated treatment with elevated disability but who reported no reductions in disability (high-disability nonimprovers; 34%); and (3) patients who initiated treatment with moderate disability and who reported statistically significant reductions in headache disability (moderate-disability improvers; 55%). Based on the final multinomial logistic regression model, a dichotomized treatment appointment attendance variable was a statistically significant predictor for differentiating high-disability improvers from high-disability nonimprovers. Three-fourths of patients who initiated treatment with elevated disability levels did not report reductions in disability after 5 months of treatment with new preventive pharmacotherapies. Preventive headache agents may be most efficacious for patients with moderate levels of disability and for patients with high disability levels who attend all treatment appointments.

  1. Quantum trajectory analysis of the two-mode three-level atom microlaser

    SciTech Connect

    Elsayed, Tarek A.; Aljalal, Abdulaziz

    2011-06-15

    We consider a single-atom laser (microlaser) operating on three-level atoms interacting with a two-mode cavity. The quantum statistical properties of the cavity field at steady state are investigated by the quantum trajectory method which is a Monte Carlo simulation applied to open quantum systems. It is found that a steady-state solution exists even when the detailed balance condition may not be guaranteed. The differences between a single-mode microlaser and a two-mode microlaser are highlighted. The second-order correlation function g{sup (2)}({tau}) of a single mode is studied and special attention is paid to the one-photon trapping state, for which a simple formula is derived for its correlation function. We show the effects of the velocity spread of the atoms used to pump the microlaser cavity on the second-order correlation function, trapping states, and phase transitions of the cavity field.

  2. The evaluation of several agility metrics for fighter aircraft using optimal trajectory analysis

    NASA Technical Reports Server (NTRS)

    Ryan, George W., III; Downing, David R.

    1993-01-01

    Several functional agility metrics, including the combat cycle time metric, dynamic speed turn plots, and relative energy state metric, are used to compare turning performance for generic F-18, X-29, and X-31-type aircraft models. These three-degree-of-freedom models have characteristics similar to the real aircraft. The performance comparisons are made using data from optimal test trajectories to reduce sensitivities to different pilot input techniques and to reduce the effects of control system limiters. The turn performance for all three aircraft is calculated for simulated minimum time 180 deg heading captures from simulation data. Comparisons of the three aircraft give more insight into turn performance than would be available from traditional measures of performance. Using the optimal test technique yields significant performance improvements as measured by the metrics. These performance improvements were found without significant increases in turn radius.

  3. Optimal trajectories for an aerospace plane. Part 1: Formulation, results, and analysis

    NASA Technical Reports Server (NTRS)

    Miele, Angelo; Lee, W. Y.; Wu, G. D.

    1990-01-01

    The optimization of the trajectories of an aerospace plane is discussed. This is a hypervelocity vehicle capable of achieving orbital speed, while taking off horizontally. The vehicle is propelled by four types of engines: turbojet engines for flight at subsonic speeds/low supersonic speeds; ramjet engines for flight at moderate supersonic speeds/low hypersonic speeds; scramjet engines for flight at hypersonic speeds; and rocket engines for flight at near-orbital speeds. A single-stage-to-orbit (SSTO) configuration is considered, and the transition from low supersonic speeds to orbital speeds is studied under the following assumptions: the turbojet portion of the trajectory has been completed; the aerospace plane is controlled via the angle of attack and the power setting; the aerodynamic model is the generic hypersonic aerodynamics model example (GHAME). Concerning the engine model, three options are considered: (EM1), a ramjet/scramjet combination in which the scramjet specific impulse tends to a nearly-constant value at large Mach numbers; (EM2), a ramjet/scramjet combination in which the scramjet specific impulse decreases monotonically at large Mach numbers; and (EM3), a ramjet/scramjet/rocket combination in which, owing to stagnation temperature limitations, the scramjet operates only at M approx. less than 15; at higher Mach numbers, the scramjet is shut off and the aerospace plane is driven only by the rocket engines. Under the above assumptions, four optimization problems are solved using the sequential gradient-restoration algorithm for optimal control problems: (P1) minimization of the weight of fuel consumed; (P2) minimization of the peak dynamic pressure; (P3) minimization of the peak heating rate; and (P4) minimization of the peak tangential acceleration.

  4. Space trajectories

    NASA Astrophysics Data System (ADS)

    Bertachinidealmeidaprado, Antonio Fernando

    The objective of this study is to present a description of the models and methods used to calculate the optimum space trajectories, from the point of view of the smallest fuel consumption that could be used to transfer a space vehicle between two given orbits. Several options for the shaping of the dynamics, the actuators' action and optimal methods are described. Classic methods (Hohmann's transfer, bi-elliptical, etc.) and modern methods (involving gravitational capture and gravity assisted maneuvers) are stated briefly, and several references are mentioned to supply more detail.

  5. Shuttle derived atmospheric density model. Part 2: STS atmospheric implications for AOTV trajectory analysis, a proposed GRAM perturbation density model

    NASA Technical Reports Server (NTRS)

    Findlay, J. T.; Kelly, G. M.; Troutman, P. A.

    1984-01-01

    A perturbation model to the Marshall Space Flight Center (MSFC) Global Reference Atmosphere Model (GRAM) was developed for use in the Aeroassist Orbital Transfer Vehicle (AOTV) trajectory and analysis. The model reflects NASA Space Shuttle experience over the first twelve entry flights. The GRAM was selected over the Air Force 1978 Reference Model because of its more general formulation and wider use throughout NASA. The add-on model, a simple scaling with altitude to reflect density structure encountered by the Shuttle Orbiter was selected principally to simplify implementation. Perturbations, by season, can be utilized to minimize the number of required simulations, however, exact Shuttle flight history can be exercised using the same model if desired. Such a perturbation model, though not meteorologically motivated, enables inclusion of High Resolution Accelerometer Package (HiRAP) results in the thermosphere. Provision is made to incorporate differing perturbations during the AOTV entry and exit phases of the aero-asist maneuver to account for trajectory displacement (geographic) along the ground track.

  6. 78 FR 14547 - Praxedes E. Alverez Santiago, M.D., Daniel Perez Brisebois, M.D., Jorge Grillasca Palou, M.D...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-03-06

    ... Praxedes E. Alverez Santiago, M.D., Daniel Perez Brisebois, M.D., Jorge Grillasca Palou, M.D., Rafael..., M.D., Daniel P rez Brisebois, M.D., Jorge Grillasca Palou, M.D., Rafael Garc a Nieves, M.D., Francis... and Dr. Daniel Perez, met with Humana representatives to discuss the 20 percent COB. During...

  7. Optimal solar sail planetocentric trajectories

    NASA Technical Reports Server (NTRS)

    Sackett, L. L.

    1977-01-01

    The analysis of solar sail planetocentric optimal trajectory problem is described. A computer program was produced to calculate optimal trajectories for a limited performance analysis. A square sail model is included and some consideration is given to a heliogyro sail model. Orbit to a subescape point and orbit to orbit transfer are considered. Trajectories about the four inner planets can be calculated and shadowing, oblateness, and solar motion may be included. Equinoctial orbital elements are used to avoid the classical singularities, and the method of averaging is applied to increase computational speed. Solution of the two-point boundary value problem which arises from the application of optimization theory is accomplished with a Newton procedure. Time optimal trajectories are emphasized, but a penalty function has been considered to prevent trajectories which intersect a planet's surface.

  8. Design of Quiet Rotorcraft Approach Trajectories: Verification Phase

    NASA Technical Reports Server (NTRS)

    Padula, Sharon L.

    2010-01-01

    Flight testing that is planned for October 2010 will provide an opportunity to evaluate rotorcraft trajectory optimization techniques. The flight test will involve a fully instrumented MD-902 helicopter, which will be flown over an array of microphones. In this work, the helicopter approach trajectory is optimized via a multiobjective genetic algorithm to improve community noise, passenger comfort, and pilot acceptance. Previously developed optimization strategies are modified to accommodate new helicopter data and to increase pilot acceptance. This paper describes the MD-902 trajectory optimization plus general optimization strategies and modifications that are needed to reduce the uncertainty in noise predictions. The constraints that are imposed by the flight test conditions and characteristics of the MD-902 helicopter limit the testing possibilities. However, the insights that will be gained through this research will prove highly valuable.

  9. An improved analytic solution for analysis of particle trajectories in fibrous, two-dimensional filters

    SciTech Connect

    Marshall, H.; Sahraoui, M.; Kaviany, M.

    1993-09-01

    The Kuwabara solution for creeping fluid flow through periodic arrangement of cylinders is widely used in analytic and numerical studies of fibrous filters. Numerical solutions have shown that the Kuwabara solution has systematic errors and when used for the particle trajectories in filters it results in some error in the predicted filter efficiency. The numerical solutions although accurate, preclude further analytic treatments and are not as compact and convenient to use as the Kuwabara solution. By re-examining the outer boundary conditions of the Kuwabara solution, we have derived a correction term to the Kuwabara solution to obtain an extended solution that is more accurate and improves prediction of the filter efficiency. By comparison with the numerical solutions, it is shown that the Kuwabara solution is the high porosity asymptote and that the extended solution has an improved porosity dependence. We explain a rectification which can make particle collection less efficient for periodic, in-line arrangements of fibers with particle diffusion or body force. This rectification also results in the alignment of particles with inertia (i.e., high Stokes number particles).

  10. Determination of upwind and downwind areas of Seoul, Korea using trajectory analysis.

    SciTech Connect

    Oh, H. S.; Ghim, Y. S.; Kim, J. Y.; Chang, Y. S.

    2010-09-01

    To identify the domains that have the greatest impacts on air quality at the surface, both the upwind and downwind areas of Seoul were determined by season using refined wind fields. Four consecutive days were selected as the study period typical of each season. The mesoscale meteorology of the study period was reproduced by using the MM5 prognostic meteorological model (PSU/NCAR Mesoscale Model) with horizontally nested grids. The gridded meteorological field, which was used on the study area of 242 km x 226 km with grid spacing of 2 km, was generated by using the CALMET diagnostic meteorological model. Upwind and downwind areas of Seoul were determined by calculating 24-hour backward and forward air parcel trajectories, respectively, with u, v, and w velocity vectors. The results showed that the upwind and downwind areas were extended far to the northwest and the southeast as a result of high wind speeds in the spring and winter, while they were restricted on the fringe of Seoul in the summer and fall.

  11. Heliocentric trajectory analysis of Sun-pointing smart dust with electrochromic control

    NASA Astrophysics Data System (ADS)

    Mengali, Giovanni; Quarta, Alessandro A.

    2016-02-01

    A smart dust is a micro spacecraft, with a characteristic side length on the order of a few millimeters, whose surface is coated with electrochromic material. Its orbital dynamics is controlled by exploiting the differential force due to the solar radiation pressure, which is obtained by modulating the reflectivity coefficient of the electrochromic material within a range of admissible values. A significant thrust level can be reached due to the high values of area-to-mass ratio of such a spacecraft configuration. Assuming that the smart dust is designed to achieve a passive Sun-pointing attitude, the propulsive acceleration due to the solar radiation pressure lies along the Sun-spacecraft direction. The aim of this paper is to study the smart dust heliocentric dynamics in order to find a closed form, analytical solution of its trajectory when the reflectivity coefficient of the electrochromic material can assume two values only. The problem is addressed by introducing a suitable transformation that regularizes the spacecraft motion and translates the smart-dust dynamics into that of a linear harmonic oscillator with unitary frequency, whose forcing input is a boxcar function. The solution is found using the Laplace transform method, and afterwards the problem is generalized by accounting for the degradation of the electrochromic material due to its exposition to the solar radiation. Three spacecraft configurations, corresponding to low, medium and high performance smart dusts, are finally used to quantify the potentialities of these advanced devices in an interplanetary mission scenario.

  12. Population Characteristics and Dosage Trajectory Analysis for Mesocriconema xenoplax in California Prunus Orchards

    PubMed Central

    Ferris, H.; McKenry, M. V.; Jaffee, B. A.; Anderson, C. E.; Juurma, A.

    2004-01-01

    The Mesocriconema xenoplax population increased exponentially in a newly planted peach orchard. The rate of increase was greater on Nemaguard than on Lovell rootstock and was reduced by postplant nematicides. Population levels were more stable in an established almond orchard on Nemaguard rootstock. All life stages of the nematode were present year round; lower ratios of juveniles to adults in summer suggested adverse effects of temperature and dry soil. Also in summer, there was a smaller proportion of the population in the upper 30 cm of soil than at greater depths. Nematode dosage, average nematode density multiplied by accumulated degree-days (physiological time) of the sampling interval, was useful in quantifying nematode stress on trees and as an indicator of the nematode management effectiveness. The annual trajectory of the nematode dosage could be determined by two samplings, one in spring and one in fall. A nematode predator, the parasitic fungus Hirsutella rhossiliensis, did not regulate ring nematode populations in the newly planted orchard; a recovery period was necessary for increase in the prevalence of parasitism. PMID:19262832

  13. First-Grade Predictors of Mathematical Learning Disability: A Latent Class Trajectory Analysis

    PubMed Central

    Geary, David C.; Bailey, Drew H.; Littlefield, Andrew; Wood, Phillip; Hoard, Mary K.; Nugent, Lara

    2009-01-01

    Kindergarten to 3rd grade mathematics achievement scores from a prospective study of mathematical development were subjected to latent growth trajectory analyses (n = 306). The four corresponding classes included children with mathematical learning disability (MLD, 6% of sample), and low (LA, 50%), typically (TA, 39%) and high (HA, 5%) achieving children. The groups were administered a battery of intelligence (IQ), working memory, and mathematical-cognition measures in 1st grade. The children with MLD had general deficits in working memory and IQ, and potentially more specific deficits on measures of number sense. The LA children did not have working memory or IQ deficits, but showed moderate deficits on these number sense measures and for addition fact retrieval. The distinguishing features of the HA children were a strong visuospatial working memory, a strong number sense, and frequent use of memory-based processes to solve addition problems. Implications for the early identification of children at risk for poor mathematics achievement are discussed. PMID:20046817

  14. Using Lidar, in-situ measurements and Trajectory Analysis to observe air pollution in Beijing, 2014

    NASA Astrophysics Data System (ADS)

    Chen, Zhenyi; Liu, Wenqing; Liu, Jianguo; Zhang, Tianshu; Dong, Yunsheng

    2016-06-01

    We present combined Mie lidar, ozone lidar and wide-range particle spectrometer observations that were carried out in Beijing, north China during two periods—one haze period before the Asia-Pacific Economic Cooperation (APEC) meeting and one moderate pollution period during the meeting in 2014. High extinction coefficient, moderate ozone concentration and variable particle number concentration were obtained throughout the first haze observation period. The mean extinction coefficients in the two pollution periods were 0.52 km-1 and 0.23 km-1, respectively, at 532 nm. The ozone concentration during the first haze phase was more various with higher average value of 49 ppb compared to that in the second pollution observations (32 ppb). The comparison of aerosols and ozone in different heights indicate different pollution sources and complicated ozone process of generation and disappearance. The four-day back trajectories from a HYSPLIT model indicate that the air masses in the lower boundary layer were advected from the densely populated south regions of China and the long pollution transportation passing through northern China.

  15. PM over summertime India: Sources and trends investigated using long term measurements and multi-receptor site back trajectory analysis

    NASA Astrophysics Data System (ADS)

    Kumar, Vinod; Sarkar, Chinmoy; Sachan, Himanshu; Kumar, Devender; Sinha, Baerbel

    2013-04-01

    We apply multi-receptor site residence-time weighted concentration back trajectory analysis to a ten year data set (1991-2003) of PM10 and TSP measurement data from four Indian megacities Delhi, Mumbai, Kolkata and Chennai. The dataset was sourced from the published and peer reviewed work of Gupta and Kumar (2006). Sources and trends of PM10 and TSP during the pre-monsoon season (March-June) were investigated. Residence-time weighted concentration maps were derived using 72 hour HYSPLIT back trajectory ensemble calculations. Trajectory runs were started 100 m AGL and the observed PM monthly averages were attributed to all trajectory runs in a month and each trajectory of the ensemble runs with equal probability. For investigating trends the dataset was further subdivided into two groups of four year durations each (1992-1995 and 2000-2003). We found a linear correlation with a slope of 1.0 (R2=0.9) between estimated seasonal average TSP (2000-2003) using our approach and the measured seasonal averages (2006-2007) for Kanpur, Ahmedabad, Pune and Bangalore. A linear fit between predicted and measured PM10 concentration for 19 sites with PM10 observations of at least one seasonal average between 1999-2009 shows a slope of 1.4 (R2=0.4). For the observation period 2000-2003, the Thar Desert and Taklimakan Desert emerged as largest sources for both PM10 (>180 μg/m3 and >200 μg/m3 respectively) and TSP (>650 μg/m3 and >725 μg/m3 respectively). In-situ observation at Bikaner (central Thar Desert) and in Jhunjhunu (semi-arid site at the border of the Thar Desert) indicate that both TSP and PM10 inside the desert source region are underpredicted by a factor of 10 compared to in-situ observations while for the semi arid area bordering the desert PM10 and TSP are underpredicted by a factor of 5 and 3 respectively. This indicates that strong sources are underpredicted by a receptor site centred approach. The entire North-Western Indo-Gangetic Basin (NW-IGB), where crop

  16. Investigating trajectories of social recovery in individuals with first-episode psychosis: a latent class growth analysis

    PubMed Central

    Hodgekins, Jo; Birchwood, Max; Christopher, Rose; Marshall, Max; Coker, Sian; Everard, Linda; Lester, Helen; Jones, Peter; Amos, Tim; Singh, Swaran; Sharma, Vimal; Freemantle, Nick; Fowler, David

    2015-01-01

    Background Social disability is a hallmark of severe mental illness yet individual differences and factors predicting outcome are largely unknown. Aim To explore trajectories and predictors of social recovery following a first episode of psychosis (FEP). Method A sample of 764 individuals with FEP were assessed on entry into early intervention in psychosis (EIP) services and followed up over 12 months. Social recovery profiles were examined using latent class growth analysis. Results Three types of social recovery profile were identified: Low Stable (66%), Moderate-Increasing (27%), and High-Decreasing (7%). Poor social recovery was predicted by male gender, ethnic minority status, younger age at onset of psychosis, increased negative symptoms, and poor premorbid adjustment. Conclusions Social disability is prevalent in FEP, although distinct recovery profiles are evident. Where social disability is present on entry into EIP services it can remain stable, highlighting a need for targeted intervention. PMID:26294371

  17. Analysis and Comparison of Clothoid and Dubins Algorithms for UAV Trajectory Generation

    NASA Astrophysics Data System (ADS)

    Al Nuaimi, Mohanad

    The differences between two types of pose-based UAV path generation methods clothoid and Dubins are analyzed in this thesis. The Dubins path is a combination of circular arcs and straight line segments; therefore its curvature will exhibit sudden jumps between constant values. The resulting path will have a minimum length if turns are performed at the minimum possible turn radius. The clothoid path consists of a similar combination of arcs and segments but the difference is that the clothoid arcs have a linearly variable curvature and are generated based on Fresnel integrals. Geometrically, the generation of the clothoid arc starts with a large curvature that decreases to zero. The clothoid path results are longer than the Dubins path between the same two poses and for the same minimum turn radius. These two algorithms are the focus of this research because of their geometrical simplicity, flexibility, and low computational requirements. The comparison between clothoid and Dubins algorithms relies on extensive simulation results collected using an ad-hoc developed automated data acquisition tool within the WVU UAV simulation environment. The model of a small jet engine UAV has been used for this purpose. The experimental design considers several primary factors, such as different trajectory tracking control laws, normal and abnormal flight conditions, relative configuration of poses, and wind and turbulence. A total of five different controllers have been considered, three conventional with fixed parameters and two adaptive. The abnormal flight conditions include locked or damaged actuators (stabilator, aileron, or rudder) and sensor bias affecting roll, pitch, or yaw rate gyros that are used in the feedback control loop. The relative configuration of consecutive poses is considered in terms of heading (required turn angle) and relative location of start and end points (position quadrant). Wind and turbulence effects were analyzed for different wind speed and

  18. Aircraft Conflict Analysis and Real-Time Conflict Probing Using Probabilistic Trajectory Modeling

    NASA Technical Reports Server (NTRS)

    Yang, Lee C.; Kuchar, James K.

    2000-01-01

    Methods for maintaining separation between aircraft in the current airspace system have been built from a foundation of structured routes and evolved procedures. However, as the airspace becomes more congested and the chance of failures or operational error become more problematic, automated conflict alerting systems have been proposed to help provide decision support and to serve as traffic monitoring aids. The problem of conflict detection and resolution has been tackled from a number of different ways, but in this thesis, it is recast as a problem of prediction in the presence of uncertainties. Much of the focus is concentrated on the errors and uncertainties from the working trajectory model used to estimate future aircraft positions. The more accurate the prediction, the more likely an ideal (no false alarms, no missed detections) alerting system can be designed. Additional insights into the problem were brought forth by a review of current operational and developmental approaches found in the literature. An iterative, trial and error approach to threshold design was identified. When examined from a probabilistic perspective, the threshold parameters were found to be a surrogate to probabilistic performance measures. To overcome the limitations in the current iterative design method, a new direct approach is presented where the performance measures are directly computed and used to perform the alerting decisions. The methodology is shown to handle complex encounter situations (3-D, multi-aircraft, multi-intent, with uncertainties) with relative ease. Utilizing a Monte Carlo approach, a method was devised to perform the probabilistic computations in near realtime. Not only does this greatly increase the method's potential as an analytical tool, but it also opens up the possibility for use as a real-time conflict alerting probe. A prototype alerting logic was developed and has been utilized in several NASA Ames Research Center experimental studies.

  19. Complexity analysis of the Next Gen Air Traffic Management System: trajectory based operations.

    PubMed

    Lyons, Rhonda

    2012-01-01

    According to Federal Aviation Administration traffic predictions currently our Air Traffic Management (ATM) system is operating at 150 percent capacity; forecasting that within the next two decades, the traffic with increase to a staggering 250 percent [17]. This will require a major redesign of our system. Today's ATM system is complex. It is designed to safely, economically, and efficiently provide air traffic services through the cost-effective provision of facilities and seamless services in collaboration with multiple agents however, contrary the vision, the system is loosely integrated and is suffering tremendously from antiquated equipment and saturated airways. The new Next Generation (Next Gen) ATM system is designed to transform the current system into an agile, robust and responsive set of operations that are designed to safely manage the growing needs of the projected increasingly complex, diverse set of air transportation system users and massive projected worldwide traffic rates. This new revolutionary technology-centric system is dynamically complex and is much more sophisticated than it's soon to be predecessor. ATM system failures could yield large scale catastrophic consequences as it is a safety critical system. This work will attempt to describe complexity and the complex nature of the NextGen ATM system and Trajectory Based Operational. Complex human factors interactions within Next Gen will be analyzed using a proposed dual experimental approach designed to identify hazards, gaps and elicit emergent hazards that would not be visible if conducted in isolation. Suggestions will be made along with a proposal for future human factors research in the TBO safety critical Next Gen environment.

  20. Determining Survey Satisficing of Online Longitudinal Survey Data in the Multicenter AIDS Cohort Study: A Group-Based Trajectory Analysis

    PubMed Central

    Di, Junrui; Li, Ying; Friedman, M Reuel; Reddy, Susheel; Surkan, Pamela J; Shoptaw, Steven

    2016-01-01

    Background Survey satisficing occurs when participants respond to survey questions rapidly without carefully reading or comprehending them. Studies have demonstrated the occurrence of survey satisficing, which can degrade survey quality, particularly in longitudinal studies. Objective The aim of this study is to use a group-based trajectory analysis method to identify satisficers when similar survey questions were asked periodically in a long-standing cohort, and to examine factors associated with satisficing in the surveys having sensitive human immunodeficiency virus (HIV)-related behavioral questions. Methods Behavioral data were collected semiannually online at all four sites of the Multicenter AIDS Cohort Study (MACS) from October 2008 through March 2013. Based on the start and end times, and the word counts per variable, response speed (word counts per second) for each participant visit was calculated. Two-step group-based trajectory analyses of the response speed across 9 study visits were performed to identify potential survey satisficing. Generalized linear models with repeated measures were used to investigate the factors associated with satisficing on HIV-related behavioral surveys. Results Among the total 2138 male participants, the median baseline age was 51 years (interquartile range, 45-58); most of the participants were non-Hispanic white (62.72%, 1341/2138) and college graduates (46.59%, 996/2138), and half were HIV seropositive (50.00%, 1069/2138). A total of 543 men (25.40%, 543/2138) were considered potential satisficers with respect to their increased trajectory tendency of response speed. In the multivariate analysis, being 10 years older at the baseline visit increased the odds of satisficing by 44% (OR 1.44, 95% CI 1.27-1.62, P<.001). Compared with the non-Hispanic white participants, non-Hispanic black participants were 122% more likely to satisfice the HIV-related behavioral survey (OR 2.22, 95% CI 1.69-2.91, P<.001), and 99% more likely

  1. Reaction analysis and visualization of ReaxFF molecular dynamics simulations.

    PubMed

    Liu, Jian; Li, Xiaoxia; Guo, Li; Zheng, Mo; Han, Junyi; Yuan, Xiaolong; Nie, Fengguang; Liu, Xiaolong

    2014-09-01

    ReaxFF MD (Reactive Force Field Molecular Dynamics) is a promising method for investigating complex chemical reactions in relatively larger scale molecular systems. The existing analysis tools for ReaxFF MD lack the capability of capturing chemical reactions directly by analyzing the simulation trajectory, which is critical in exploring reaction mechanisms. This paper presents the algorithms, implementation strategies, features, and applications of VARxMD, a tool for Visualization and Analysis of Reactive Molecular Dynamics. VARxMD is dedicated to detailed chemical reaction analysis and visualization from the trajectories obtained in ReaxFF MD simulations. The interrelationships among the atoms, bonds, fragments, species and reactions are analyzed directly from the three-dimensional (3D) coordinates and bond orders of the atoms in a trajectory, which are accomplished by determination of atomic connectivity for recognizing connected molecular fragments, perception of bond types in the connected fragments for molecules or radicals, indexing of all these molecules or radicals (chemical species) based on their 3D coordinates and recognition of bond breaking or forming in the chemical species for reactions. Consequently, detailed chemical reactions taking place between two sampled frames can be generated automatically. VARxMD is the first tool specialized for reaction analysis and visualization in ReaxFF MD simulations. Applications of VARxMD in ReaxFF MD simulations of coal and HDPE (high-density polyethylene) pyrolysis show that VARxMD provides the capabilities in exploring the reaction mechanism in large systems with complex chemical reactions involved that are difficult to access manually. PMID:25064439

  2. Reaction analysis and visualization of ReaxFF molecular dynamics simulations.

    PubMed

    Liu, Jian; Li, Xiaoxia; Guo, Li; Zheng, Mo; Han, Junyi; Yuan, Xiaolong; Nie, Fengguang; Liu, Xiaolong

    2014-09-01

    ReaxFF MD (Reactive Force Field Molecular Dynamics) is a promising method for investigating complex chemical reactions in relatively larger scale molecular systems. The existing analysis tools for ReaxFF MD lack the capability of capturing chemical reactions directly by analyzing the simulation trajectory, which is critical in exploring reaction mechanisms. This paper presents the algorithms, implementation strategies, features, and applications of VARxMD, a tool for Visualization and Analysis of Reactive Molecular Dynamics. VARxMD is dedicated to detailed chemical reaction analysis and visualization from the trajectories obtained in ReaxFF MD simulations. The interrelationships among the atoms, bonds, fragments, species and reactions are analyzed directly from the three-dimensional (3D) coordinates and bond orders of the atoms in a trajectory, which are accomplished by determination of atomic connectivity for recognizing connected molecular fragments, perception of bond types in the connected fragments for molecules or radicals, indexing of all these molecules or radicals (chemical species) based on their 3D coordinates and recognition of bond breaking or forming in the chemical species for reactions. Consequently, detailed chemical reactions taking place between two sampled frames can be generated automatically. VARxMD is the first tool specialized for reaction analysis and visualization in ReaxFF MD simulations. Applications of VARxMD in ReaxFF MD simulations of coal and HDPE (high-density polyethylene) pyrolysis show that VARxMD provides the capabilities in exploring the reaction mechanism in large systems with complex chemical reactions involved that are difficult to access manually.

  3. Seismic analysis of clinoform depositional sequences and shelf-margin trajectories in Lower Cretaceous (Albian) strata, Alaska North Slope

    USGS Publications Warehouse

    Houseknecht, D.W.; Bird, K.J.; Schenk, C.J.

    2009-01-01

    Lower Cretaceous strata beneath the Alaska North Slope include clinoform depositional sequences that filled the western Colville foreland basin and overstepped the Beaufort rift shoulder. Analysis of Albian clinoform sequences with two-dimensional (2D) seismic data resulted in the recognition of seismic facies inferred to represent lowstand, transgressive and highstand systems tracts. These are stacked to produce shelf-margin trajectories that appear in low-resolution seismic data to alternate between aggradational and progradational. Higher-resolution seismic data reveal shelf-margin trajectories that are more complex, particularly in net-aggradational areas, where three patterns commonly are observed: (1) a negative (downward) step across the sequence boundary followed by mostly aggradation in the lowstand systems tract (LST), (2) a positive (upward) step across the sequence boundary followed by mostly progradation in the LST and (3) an upward backstep across a mass-failure d??collement. These different shelf-margin trajectories are interpreted as (1) fall of relative sea level below the shelf edge, (2) fall of relative sea level to above the shelf edge and (3) mass-failure removal of shelf-margin sediment. Lowstand shelf margins mapped using these criteria are oriented north-south in the foreland basin, indicating longitudinal filling from west to east. The shelf margins turn westward in the north, where the clinoform depositional system overstepped the rift shoulder, and turn eastward in the south, suggesting progradation of depositional systems from the ancestral Brooks Range into the foredeep. Lowstand shelf-margin orientations are consistently perpendicular to clinoform-foreset-dip directions. Although the Albian clinoform sequences of the Alaska North Slope are generally similar in stratal geometry to clinoform sequences elsewhere, they are significantly thicker. Clinoform-sequence thickness ranges from 600-1000 m in the north to 1700-2000 m in the south

  4. Galileo's Trajectory with Mild Resistance

    ERIC Educational Resources Information Center

    Groetsch, C. W.

    2012-01-01

    An aspect of Galileo's classical trajectory that persists in a simple resistance model is noted. The resistive model provides a case study for the classroom analysis of limiting behaviour of an implicitly defined function. (Contains 1 note.)

  5. Apple fruit copper amine oxidase isoforms: peroxisomal MdAO1 prefers diamines as substrates, whereas extracellular MdAO2 exclusively utilizes monoamines.

    PubMed

    Zarei, Adel; Trobacher, Christopher P; Cooke, Alison R; Meyers, Ashley J; Hall, J Christopher; Shelp, Barry J

    2015-01-01

    4-Aminobutyrate (GABA) accumulates in apple fruit during controlled atmosphere storage. A potential source of GABA is the polyamine putrescine, which can be oxidized via copper-containing amine oxidase (CuAO), resulting in the production 4-aminobutanal/Δ(1)-pyrroline, with the consumption of O2 and release of H2O2 and ammonia. Five putative CuAO genes (MdAO genes) were cloned from apple (Malus domestica Borkh. cv. Empire) fruit, and the deduced amino acid sequences found to contain the active sites typically conserved in CuAOs. Genes encoding two of these enzymes, MdAO1 and MdAO2, were highly expressed in apple fruit and selected for further analysis. Amino acid sequence analysis predicted the presence of a C-terminal peroxisomal targeting signal 1 tripeptide in MdAO1 and an N-terminal signal peptide and N-glycosylation site in MdAO2. Transient expression of green fluorescent fusion proteins in Arabidopsis protoplasts or onion epidermal cells revealed a peroxisomal localization for MdAO1 and an extracellular localization for MdAO2. The enzymatic activities of purified recombinant MdAO1 and MdAO2 were measured continuously as H2O2 production using a coupled reaction. MdAO1 did not use monoamines or polyamines and displayed high catalytic efficiency for 1,3-diaminopropane, putrescine and cadaverine, whereas MdAO2 exclusively utilized aliphatic and aromatic monoamines, including 2-phenylethylamine and tyramine. Together, these results indicate that MdAO1 may contribute to GABA production via putrescine oxidation in the peroxisome of apple fruit under controlled atmosphere conditions. MdAO2 seems to be involved in deamination of 2-phenylethylamine, which is a step in the biosynthesis of 2-phenylethanol, a contributor to fruit flavor and flower fragrance.

  6. Apple fruit copper amine oxidase isoforms: peroxisomal MdAO1 prefers diamines as substrates, whereas extracellular MdAO2 exclusively utilizes monoamines.

    PubMed

    Zarei, Adel; Trobacher, Christopher P; Cooke, Alison R; Meyers, Ashley J; Hall, J Christopher; Shelp, Barry J

    2015-01-01

    4-Aminobutyrate (GABA) accumulates in apple fruit during controlled atmosphere storage. A potential source of GABA is the polyamine putrescine, which can be oxidized via copper-containing amine oxidase (CuAO), resulting in the production 4-aminobutanal/Δ(1)-pyrroline, with the consumption of O2 and release of H2O2 and ammonia. Five putative CuAO genes (MdAO genes) were cloned from apple (Malus domestica Borkh. cv. Empire) fruit, and the deduced amino acid sequences found to contain the active sites typically conserved in CuAOs. Genes encoding two of these enzymes, MdAO1 and MdAO2, were highly expressed in apple fruit and selected for further analysis. Amino acid sequence analysis predicted the presence of a C-terminal peroxisomal targeting signal 1 tripeptide in MdAO1 and an N-terminal signal peptide and N-glycosylation site in MdAO2. Transient expression of green fluorescent fusion proteins in Arabidopsis protoplasts or onion epidermal cells revealed a peroxisomal localization for MdAO1 and an extracellular localization for MdAO2. The enzymatic activities of purified recombinant MdAO1 and MdAO2 were measured continuously as H2O2 production using a coupled reaction. MdAO1 did not use monoamines or polyamines and displayed high catalytic efficiency for 1,3-diaminopropane, putrescine and cadaverine, whereas MdAO2 exclusively utilized aliphatic and aromatic monoamines, including 2-phenylethylamine and tyramine. Together, these results indicate that MdAO1 may contribute to GABA production via putrescine oxidation in the peroxisome of apple fruit under controlled atmosphere conditions. MdAO2 seems to be involved in deamination of 2-phenylethylamine, which is a step in the biosynthesis of 2-phenylethanol, a contributor to fruit flavor and flower fragrance. PMID:25378687

  7. Trajectory NG: portable, compressed, general molecular dynamics trajectories.

    PubMed

    Spångberg, Daniel; Larsson, Daniel S D; van der Spoel, David

    2011-10-01

    We present general algorithms for the compression of molecular dynamics trajectories. The standard ways to store MD trajectories as text or as raw binary floating point numbers result in very large files when efficient simulation programs are used on supercomputers. Our algorithms are based on the observation that differences in atomic coordinates/velocities, in either time or space, are generally smaller than the absolute values of the coordinates/velocities. Also, it is often possible to store values at a lower precision. We apply several compression schemes to compress the resulting differences further. The most efficient algorithms developed here use a block sorting algorithm in combination with Huffman coding. Depending on the frequency of storage of frames in the trajectory, either space, time, or combinations of space and time differences are usually the most efficient. We compare the efficiency of our algorithms with each other and with other algorithms present in the literature for various systems: liquid argon, water, a virus capsid solvated in 15 mM aqueous NaCl, and solid magnesium oxide. We perform tests to determine how much precision is necessary to obtain accurate structural and dynamic properties, as well as benchmark a parallelized implementation of the algorithms. We obtain compression ratios (compared to single precision floating point) of 1:3.3-1:35 depending on the frequency of storage of frames and the system studied. PMID:21267752

  8. Regional analysis of population trajectories from the North American Breeding Bird Survey

    USGS Publications Warehouse

    Sauer, J.R.; Link, W.A.; Helbig, Andreas J.; Flade, Martin

    1999-01-01

    The North American Breeding Bird Survey (BBS) was started in 1966, and provides information on population change and distribution for most of the birds in North America. The geographic extent of the survey, and the logistical compromises needed to survey such a large area, present many challenges for estimation from BBS data. In this paper, we describe the survey and discuss some of the limitations of the survey design and implementation. Analysis of the survey has evolved over time as new statistical methods and insights into the analysis of count data are developed. Survey results and analysis tools for the BBS are now available over intemet; we present new methods that use generalized linear models for estimation of population change and empirical Bayes procedures for regional summaries.

  9. Interaction analysis of HIV-1 antibody 2G12 and Man9GlcNAc2 ligand: Theoretical calculations by fragment molecular orbital and MD methods

    NASA Astrophysics Data System (ADS)

    Koyama, Yuka; Ueno-Noto, Kaori; Takano, Keiko

    2013-07-01

    In HIV-1 infection, human antibody 2G12 is capable of recognizing the high-mannose glycans on the HIV-1 surface glycoprotein, gp120. To investigate the ligand binding mechanisms of antibody 2G12 with glycans aiming for the contribution to the medications, we carried out classical molecular dynamics (MD) simulations and ab initio fragment molecular orbital (FMO) calculations on the antibody 2G12 complex with its high-mannose ligand. We found that Mannose D1 of the ligand had the largest binding affinity with the antibody, which was well consistent with experimental reports. Furthermore, significant roles of Mannose 4 and 4‧ in the ligand binding were theoretically indicated.

  10. GEODYN system support program, volume 4. [computer program for trajectory analysis of artificial satellites

    NASA Technical Reports Server (NTRS)

    Mullins, N. E.

    1972-01-01

    The GEODYN Orbit Determination and Geodetic Parameter Estimation System consists of a set of computer programs designed to determine and analyze definitive satellite orbits and their associated geodetic and measurement parameters. This manual describes the Support Programs used by the GEODYN System. The mathematics and programming descriptions are detailed. The operational procedures of each program are presented. GEODYN ancillary analysis programs may be grouped into three different categories: (1) orbit comparison - DELTA (2) data analysis using reference orbits - GEORGE, and (3) pass geometry computations - GROUNDTRACK. All of the above three programs use one or more tapes written by the GEODYN program in either a data reduction or orbit generator run.

  11. Teacher Analysis of Student Knowledge (TASK): A Measure of Learning Trajectory-Oriented Formative Assessment

    ERIC Educational Resources Information Center

    Supovitz, Jonathan; Ebby, Caroline B.; Sirinides, Philip

    2013-01-01

    This interactive electronic report provides an overview of an innovative new instrument developed by researchers at the Consortium for Policy Research in Education (CPRE) to authentically measure teachers' formative assessment practices in mathematics. The Teacher Analysis of Student Knowledge, or TASK, instrument assesses mathematics…

  12. Student Trajectories in Physics: The Need for Analysis through a Socio-Cultural Lens

    ERIC Educational Resources Information Center

    Zapata, Mara

    2010-01-01

    An analysis of student connections through time and space relative to the core discipline of physics is attempted, as viewed through the lens of actor-network-theory, by Antonia Candela. Using lenses of cultural realities, networks, and perceived power in the discourse of one specific university in the capital city of Mexico and one undergraduate…

  13. Measurement of the Md3+/Md2+ reduction potential studied with flow electrolytic chromatography.

    PubMed

    Toyoshima, Atsushi; Li, Zijie; Asai, Masato; Sato, Nozomi; Sato, Tetsuya K; Kikuchi, Takahiro; Kaneya, Yusuke; Kitatsuji, Yoshihiro; Tsukada, Kazuaki; Nagame, Yuichiro; Schädel, Matthias; Ooe, Kazuhiro; Kasamatsu, Yoshitaka; Shinohara, Atsushi; Haba, Hiromitsu; Even, Julia

    2013-11-01

    The reduction behavior of mendelevium (Md) was studied using a flow electrolytic chromatography apparatus. By application of the appropriate potentials on the chromatography column, the more stable Md(3+) is reduced to Md(2+). The reduction potential of the Md(3+) + e(-) → Md(2+) couple was determined to be -0.16 ± 0.05 V versus a normal hydrogen electrode. PMID:24116851

  14. A Topical Trajectory on Survival: an Analysis of Link-Making in a Sequence of Lessons on Evolution

    NASA Astrophysics Data System (ADS)

    Rocksén, Miranda; Olander, Clas

    2016-04-01

    This study explores the concept of link-making in relation to communicative strategies applied in the teaching and studying of biological evolution. The analysis focused on video recordings of 11 lessons on biological evolution conducted in a Swedish 9th grade class of students aged 15 years. It reveals how the teacher and students connected classroom conversations, the frequency of references to conversations in whole-class settings, and the development of a theme focusing on species survival and extinction. Detailed examples from the data illustrate how this theme developed from its initiation during the first lesson, through discussion and clarification, to its wrapping up during the last lesson. They further illustrate how students made sense of what the teacher said and wrote, and how the teacher postponed issues, explained and developed topics, provided opportunities for link-making, organised the class, motivated students, and checked their understanding. The study's methodological approach offers a way of including several time dimensions within research. Based on our findings, we conclude that the excerpts examined here did succeed in building `islands of coherence' in the co-construction of curricular content. Moreover, the topical trajectory in relation to species survival provided opportunities for constructing a `scientific story' in the classroom.

  15. Analysis of particle trajectories in a simulated, magnetized dusty plasma in a radially-increasing electric field

    NASA Astrophysics Data System (ADS)

    Bender, Brian; Thomas, Edward

    2015-11-01

    Using the DEMON (Dynamic Exploration of Microparticle clouds Optimized Numerically) code, a molecular dynamics simulation of dusty plasma was performed. In this simulation, an initial grid of particles is subjected to a uniform magnetic field and a perpendicular electric field whose magnitude increases radially. To analyze the output of the simulation, a single particle was chosen and a Fourier analysis of its trajectory is performed, revealing two primary frequencies that contain information about the E x B drift motion and the gyromotion of the particle. If the electric field only increases linearly, the difference between the two frequencies is the cyclotron frequency, which agrees with analytical results. If the electric field model is modified by an exponential decay term, then the frequencies depend on the particle's initial conditions. These results will help us to understand the electric field configuration of the MDPX device as well as highlight interesting parameter regimes for further study. This project is supported with funds from the NSF and Dept. of Energy.

  16. Uncertainty optimization applied to the Monte Carlo analysis of planetary entry trajectories

    NASA Astrophysics Data System (ADS)

    Way, David Wesley

    2001-10-01

    Future robotic missions to Mars, as well as any human missions, will require precise entries to ensure safe landings near science objectives and pre-deployed assets. Planning for these missions will depend heavily on Monte Carlo analyses to evaluate active guidance algorithms, assess the impact of off-nominal conditions, and account for uncertainty. The dependability of Monte Carlo forecasts, however, is limited by the accuracy and completeness of the assumed uncertainties. This is because Monte Carlo analysis is a forward driven problem; beginning with the input uncertainties and proceeding to the forecast output statistics. An improvement to the Monte Carlo analysis is needed that will allow the problem to be worked in reverse. In this way, the largest allowable dispersions that achieve the required mission objectives can be determined quantitatively. This thesis proposes a methodology to optimize the uncertainties in the Monte Carlo analysis of spacecraft landing footprints. A metamodel is used to first write polynomial expressions for the size of the landing footprint as functions of the independent uncertainty extrema. The coefficients of the metamodel are determined by performing experiments. The metamodel is then used in a constrained optimization procedure to minimize a cost-tolerance function. First, a two-dimensional proof-of-concept problem was used to evaluate the feasibility of this optimization method. Next, the optimization method was further demonstrated on the Mars Surveyor Program 2001 Lander. The purpose of this example was to demonstrate that the methodology developed during the proof-of-concept could be scaled to solve larger, more complicated, "real world" problems. This research has shown that is possible to control the size of the landing footprint and establish tolerances for mission uncertainties. A simplified metamodel was developed, which is enabling for realistic problems with more than just a few uncertainties. A confidence interval on

  17. Multi-Mission Earth Entry Vehicle: Aerodynamic and Aerothermal Analysis of Trajectory Environments

    NASA Technical Reports Server (NTRS)

    Trumble, Kerry; Dyakonov, Artem; Fuller, John

    2010-01-01

    Multi-mission Earth Entry Vehicle (MMEEV) is designed to deliver small payloads from space to Earth's surface by flying an uncontrolled ballistic entry, which ends with ground impact. The included range of entry velocities is from 10 to 16 km/s. The range of ballistic coefficients is from 41.94 to 128.74 kg/m2, which insures a low subsonic terminal velocity on the order of 50 m/sec. The range of entry flight path angles, considered in this analysis is from -5 to -25 degrees. The assessment and parametric characterization of aeroheating and aerodynamic performance of the capsule during entry is the subject of this paper.

  18. Analysis of Debris Trajectories at the Scaled Wind Farm Technology (SWiFT) Facility

    SciTech Connect

    White, Jonathan R.; Burnett, Damon J.

    2016-01-01

    Sandia National Laboratories operates the Scaled Wind Farm Technology Facility (SWiFT) on behalf of the Department of Energy Wind and Water Power Technologies Office. An analysis was performed to evaluate the hazards associated with debris thrown from one of SWiFT’s operating wind turbines, assuming a catastrophic failure. A Monte Carlo analysis was conducted to assess the complex variable space associated with debris throw hazards that included wind speed, wind direction, azimuth and pitch angles of the blade, and percentage of the blade that was separated. In addition, a set of high fidelity explicit dynamic finite element simulations were performed to determine the threshold impact energy envelope for the turbine control building located on-site. Assuming that all of the layered, independent, passive and active engineered safety systems and administrative procedures failed (a 100% failure rate of the safety systems), the likelihood of the control building being struck was calculated to be less than 5/10,000 and ballistic simulations showed that the control building would not provide passive protection for the majority of impact scenarios. Although options exist to improve the ballistic resistance of the control building, the recommendation is not to pursue them because there is a low probability of strike and there is an equal likelihood personnel could be located at similar distances in other areas of the SWiFT facility which are not passively protected, while the turbines are operating. A fenced exclusion area has been created around the turbines which restricts access to the boundary of the 1/100 strike probability. The overall recommendation is to neither relocate nor improve passive protection of the control building as the turbine safety systems have been improved to have no less than two independent, redundant, high quality engineered safety systems. Considering this, in combination with a control building strike probability of less than 5/10,000, the

  19. Development of Advanced Methods of Structural and Trajectory Analysis for Transport Aircraft

    NASA Technical Reports Server (NTRS)

    Ardema, Mark D.

    1996-01-01

    In this report the author describes: (1) development of advanced methods of structural weight estimation, and (2) development of advanced methods of flight path optimization. A method of estimating the load-bearing fuselage weight and wing weight of transport aircraft based on fundamental structural principles has been developed. This method of weight estimation represents a compromise between the rapid assessment of component weight using empirical methods based on actual weights of existing aircraft and detailed, but time-consuming, analysis using the finite element method. The method was applied to eight existing subsonic transports for validation and correlation. Integration of the resulting computer program, PDCYL, has been made into the weights-calculating module of the AirCraft SYNThesis (ACSYNT) computer program. ACSYNT bas traditionally used only empirical weight estimation methods; PDCYL adds to ACSYNT a rapid, accurate means of assessing the fuselage and wing weights of unconventional aircraft. PDCYL also allows flexibility in the choice of structural concept, as well as a direct means of determining the impact of advanced materials on structural weight.

  20. Eye safety analysis for non-uniform retinal scanning laser trajectories

    NASA Astrophysics Data System (ADS)

    Schelinski, Uwe; Dallmann, Hans-Georg; Grüger, Heinrich; Knobbe, Jens; Pügner, Tino; Reinig, Peter; Woittennek, Franziska

    2016-03-01

    Scanning the retinae of the human eyes with a laser beam is an approved diagnosis method in ophthalmology; moreover the retinal blood vessels form a biometric modality for identifying persons. Medical applied Scanning Laser Ophthalmoscopes (SLOs) usually contain galvanometric mirror systems to move the laser spot with a defined speed across the retina. Hence, the load of laser radiation is uniformly distributed and eye safety requirements can be easily complied. Micro machined mirrors also known as Micro Electro Mechanical Systems (MEMS) are interesting alternatives for designing retina scanning systems. In particular double-resonant MEMS are well suited for mass fabrication at low cost. However, their Lissajous-shaped scanning figure requires a particular analysis and specific measures to meet the requirements for a Class 1 laser device, i.e. eye-safe operation. The scanning laser spot causes a non-uniform pulsing radiation load hitting the retinal elements within the field of view (FoV). The relevant laser safety standards define a smallest considerable element for eye-related impacts to be a point source that is visible with an angle of maximum 1.5 mrad. For non-uniform pulsing expositions onto retinal elements the standard requires to consider all particular impacts, i.e. single pulses, pulse sequences in certain time intervals and cumulated laser radiation loads. As it may be expected, a Lissajous scanning figure causes the most critical radiation loads at its edges and borders. Depending on the applied power the laser has to be switched off here to avoid any retinal injury.

  1. [Bloodstain pattern analysis on examples from practice: Are calculations with application parabolic trajectory usable?].

    PubMed

    Makovický, Peter; Matlach, Radek; Pokorná, Olga; Mošna, František; Makovický, Pavol

    2015-01-01

    The bloodstain pattern analysis (BPA) is useful in the forensic medicine. In Czechoslovakian criminology is this method not commonly used. The objective of this work is to calculate the impact length, height and distance splashing of blood drops. The results are compared with the real values for specific cases. It is also compared to calculate the angle of incidence of blood drops, using sinα with a form using tgα. For this purposes we used two different character cases from practice with well-preserved condition and readable blood stains. Selected blood stains were documented in order to calculate the angle of incidence of blood drops and to calculateorigin splashes. For this drop of blood, the distance of impact of the drops of blood (x), the height of the sprayed blood drops (y) and the length of the flight path the drop of blood (l). The obtained data was retrospectively analysed for the two models. The first straight line is represented by the triangle (M1) and the other is the parabolic model (M2). The formulae were derived using the Euler substitution. The results show that the angle of incidence of the drop of blood can be calculated as sinα and the tgα. When applying, the triangle is appropriate to consider the application and sinα parabolic requires the calculation of the angle of incidence drops of blood tgα. Parabola is useful for the BPA. In Czechoslovakian should be providing workplace training seminars BPA primarily intended for forensic investigators.We recommend the use of this method during investigations, verification of acts in forensic practice. PMID:26585307

  2. [Bloodstain pattern analysis on examples from practice: Are calculations with application parabolic trajectory usable?].

    PubMed

    Makovický, Peter; Matlach, Radek; Pokorná, Olga; Mošna, František; Makovický, Pavol

    2015-01-01

    The bloodstain pattern analysis (BPA) is useful in the forensic medicine. In Czechoslovakian criminology is this method not commonly used. The objective of this work is to calculate the impact length, height and distance splashing of blood drops. The results are compared with the real values for specific cases. It is also compared to calculate the angle of incidence of blood drops, using sinα with a form using tgα. For this purposes we used two different character cases from practice with well-preserved condition and readable blood stains. Selected blood stains were documented in order to calculate the angle of incidence of blood drops and to calculateorigin splashes. For this drop of blood, the distance of impact of the drops of blood (x), the height of the sprayed blood drops (y) and the length of the flight path the drop of blood (l). The obtained data was retrospectively analysed for the two models. The first straight line is represented by the triangle (M1) and the other is the parabolic model (M2). The formulae were derived using the Euler substitution. The results show that the angle of incidence of the drop of blood can be calculated as sinα and the tgα. When applying, the triangle is appropriate to consider the application and sinα parabolic requires the calculation of the angle of incidence drops of blood tgα. Parabola is useful for the BPA. In Czechoslovakian should be providing workplace training seminars BPA primarily intended for forensic investigators.We recommend the use of this method during investigations, verification of acts in forensic practice.

  3. Analysis of Trajectory Parameters for Probe and Round-Trip Missions to Venus

    NASA Technical Reports Server (NTRS)

    Dugan, James F., Jr.; Simsic, Carl R.

    1960-01-01

    For one-way transfers between Earth and Venus, charts are obtained that show velocity, time, and angle parameters as functions of the eccentricity and semilatus rectum of the Sun-focused vehicle conic. From these curves, others are obtained that are useful in planning one-way and round-trip missions to Venus. The analysis is characterized by circular coplanar planetary orbits, successive two-body approximations, impulsive velocity changes, and circular parking orbits at 1.1 planet radii. For round trips the mission time considered ranges from 65 to 788 days, while wait time spent in the parking orbit at Venus ranges from 0 to 467 days. Individual velocity increments, one-way travel times, and departure dates are presented for round trips requiring the minimum total velocity increment. For both single-pass and orbiting Venusian probes, the time span available for launch becomes appreciable with only a small increase in velocity-increment capability above the minimum requirement. Velocity-increment increases are much more effective in reducing travel time for single-pass probes than they are for orbiting probes. Round trips composed of a direct route along an ellipse tangent to Earth's orbit and an aphelion route result in the minimum total velocity increment for wait times less than 100 days and mission times ranging from 145 to 612 days. Minimum-total-velocity-increment trips may be taken along perihelion-perihelion routes for wait times ranging from 300 to 467 days. These wait times occur during missions lasting from 640 to 759 days.

  4. Potential emission flux to aerosol pollutants over Bengal Gangetic plain through combined trajectory clustering and aerosol source fields analysis

    NASA Astrophysics Data System (ADS)

    Kumar, D. Bharath; Verma, S.

    2016-09-01

    A hybrid source-receptor analysis was carried out to evaluate the potential emission flux to winter monsoon (WinMon) aerosols over Bengal Gangetic plain urban (Kolkata, Kol) and semi-urban atmospheres (Kharagpur, Kgp). This was done through application of fuzzy c-mean clustering to back-trajectory data combined with emission flux and residence time weighted aerosols analysis. WinMon mean aerosol optical depth (AOD) and angstrom exponent (AE) at Kol (AOD: 0.77; AE: 1.17) were respectively slightly higher than and nearly equal to that at Kgp (AOD: 0.71; AE: 1.18). Out of six source region clusters over Indian subcontinent and two over Indian oceanic region, the cluster mean AOD was the highest when associated with the mean path of air mass originating from the Bay of Bengal and the Arabian sea clusters at Kol and that from the Indo-Gangetic plain (IGP) cluster at Kgp. Spatial distribution of weighted AOD fields showed the highest potential source of aerosols over the IGP, primarily over upper IGP (e.g. Punjab, Haryana), lower IGP (e.g. Uttarpradesh) and eastern region (e.g. west Bengal, Bihar, northeast India) clusters. The emission flux contribution potential (EFCP) of fossil fuel (FF) emissions at surface (SL) of Kol/Kgp, elevated layer (EL) of Kol, and of biomass burning (BB) emissions at SL of Kol were primarily from upper, lower, upper/lower IGP clusters respectively. The EFCP of FF/BB emissions at Kgp-EL/SL, and that of BB at EL of Kol/Kgp were mainly from eastern region and Africa (AFR) clusters respectively. Though the AFR cluster was constituted of significantly high emission flux source potential of dust emissions, the EFCP of dust from northwest India (NWI) was comparable to that from AFR at Kol SL/EL.

  5. BIGNASim: a NoSQL database structure and analysis portal for nucleic acids simulation data.

    PubMed

    Hospital, Adam; Andrio, Pau; Cugnasco, Cesare; Codo, Laia; Becerra, Yolanda; Dans, Pablo D; Battistini, Federica; Torres, Jordi; Goñi, Ramón; Orozco, Modesto; Gelpí, Josep Ll

    2016-01-01

    Molecular dynamics simulation (MD) is, just behind genomics, the bioinformatics tool that generates the largest amounts of data, and that is using the largest amount of CPU time in supercomputing centres. MD trajectories are obtained after months of calculations, analysed in situ, and in practice forgotten. Several projects to generate stable trajectory databases have been developed for proteins, but no equivalence exists in the nucleic acids world. We present here a novel database system to store MD trajectories and analyses of nucleic acids. The initial data set available consists mainly of the benchmark of the new molecular dynamics force-field, parmBSC1. It contains 156 simulations, with over 120 μs of total simulation time. A deposition protocol is available to accept the submission of new trajectory data. The database is based on the combination of two NoSQL engines, Cassandra for storing trajectories and MongoDB to store analysis results and simulation metadata. The analyses available include backbone geometries, helical analysis, NMR observables and a variety of mechanical analyses. Individual trajectories and combined meta-trajectories can be downloaded from the portal. The system is accessible through http://mmb.irbbarcelona.org/BIGNASim/. Supplementary Material is also available on-line at http://mmb.irbbarcelona.org/BIGNASim/SuppMaterial/. PMID:26612862

  6. BIGNASim: a NoSQL database structure and analysis portal for nucleic acids simulation data

    PubMed Central

    Hospital, Adam; Andrio, Pau; Cugnasco, Cesare; Codo, Laia; Becerra, Yolanda; Dans, Pablo D.; Battistini, Federica; Torres, Jordi; Goñi, Ramón; Orozco, Modesto; Gelpí, Josep Ll.

    2016-01-01

    Molecular dynamics simulation (MD) is, just behind genomics, the bioinformatics tool that generates the largest amounts of data, and that is using the largest amount of CPU time in supercomputing centres. MD trajectories are obtained after months of calculations, analysed in situ, and in practice forgotten. Several projects to generate stable trajectory databases have been developed for proteins, but no equivalence exists in the nucleic acids world. We present here a novel database system to store MD trajectories and analyses of nucleic acids. The initial data set available consists mainly of the benchmark of the new molecular dynamics force-field, parmBSC1. It contains 156 simulations, with over 120 μs of total simulation time. A deposition protocol is available to accept the submission of new trajectory data. The database is based on the combination of two NoSQL engines, Cassandra for storing trajectories and MongoDB to store analysis results and simulation metadata. The analyses available include backbone geometries, helical analysis, NMR observables and a variety of mechanical analyses. Individual trajectories and combined meta-trajectories can be downloaded from the portal. The system is accessible through http://mmb.irbbarcelona.org/BIGNASim/. Supplementary Material is also available on-line at http://mmb.irbbarcelona.org/BIGNASim/SuppMaterial/. PMID:26612862

  7. BIGNASim: a NoSQL database structure and analysis portal for nucleic acids simulation data.

    PubMed

    Hospital, Adam; Andrio, Pau; Cugnasco, Cesare; Codo, Laia; Becerra, Yolanda; Dans, Pablo D; Battistini, Federica; Torres, Jordi; Goñi, Ramón; Orozco, Modesto; Gelpí, Josep Ll

    2016-01-01

    Molecular dynamics simulation (MD) is, just behind genomics, the bioinformatics tool that generates the largest amounts of data, and that is using the largest amount of CPU time in supercomputing centres. MD trajectories are obtained after months of calculations, analysed in situ, and in practice forgotten. Several projects to generate stable trajectory databases have been developed for proteins, but no equivalence exists in the nucleic acids world. We present here a novel database system to store MD trajectories and analyses of nucleic acids. The initial data set available consists mainly of the benchmark of the new molecular dynamics force-field, parmBSC1. It contains 156 simulations, with over 120 μs of total simulation time. A deposition protocol is available to accept the submission of new trajectory data. The database is based on the combination of two NoSQL engines, Cassandra for storing trajectories and MongoDB to store analysis results and simulation metadata. The analyses available include backbone geometries, helical analysis, NMR observables and a variety of mechanical analyses. Individual trajectories and combined meta-trajectories can be downloaded from the portal. The system is accessible through http://mmb.irbbarcelona.org/BIGNASim/. Supplementary Material is also available on-line at http://mmb.irbbarcelona.org/BIGNASim/SuppMaterial/.

  8. Identifying Neurocognitive Decline at 36 Months among HIV-Positive Participants in the CHARTER Cohort Using Group-Based Trajectory Analysis

    PubMed Central

    Brouillette, Marie-Josée; Fellows, Lesley K.; Cysique, Lucette A.; Heaton, Robert K.

    2016-01-01

    Introduction While HIV-associated neurocognitive impairment remains common despite the widespread use of combined antiretroviral therapy (cART), there have been relatively few studies investigating the trajectories of neurocognitive change in longitudinal NeuroAIDS studies. Objective To estimate the magnitude and pattern of neurocognitive change over the first 3 years of follow-up using Group-Based Trajectory Analysis (GBTA) applied to participants in the longitudinal arm of the CHARTER cohort. Method The study population consisted of 701 CHARTER participants who underwent neuropsychological (NP) testing on at least 2 occasions. Raw test scores on 15 NP measures were modeled using GBTA. Each trajectory was categorized as stable, improved or declined, according to two different criteria for change (whether the magnitude of the estimated change at 36 months differed ≥ 0.5 standard deviations from baseline value or changed by > the standard error of measurement estimated at times 1 and 2). Individuals who declined on one or more NP measures were categorized as decliners. Results Overall, 111 individuals (15.8%) declined on at least one NP test over 36 months, with the vast majority showing decline on a single NP test (93/111-83.8%). The posterior probability of group assignment was high in most participants (71%) after only 2 sessions, and in the overwhelming majority of those with 3+ sessions. Heterogeneity of trajectories was the norm rather than the exception. Individuals who declined had, on average, worse baseline NP performance on every test, were older, had a longer duration of HIV infection and more follow-up sessions. Conclusion The present study identified heterogeneous trajectories over 3 years across 15 NP raw test scores using GBTA. Cognitive decline was observed in only a small subset of this study cohort. Decliners had demographics and HIV characteristics that have been previously associated with cognitive decline, suggesting clinical validity for the

  9. Trajectories and magnitude of change in coral reef fish populations in Philippine marine reserves: a meta-analysis

    NASA Astrophysics Data System (ADS)

    Maliao, R. J.; White, A. T.; Maypa, A. P.; Turingan, R. G.

    2009-12-01

    Marine reserves are widely implemented worldwide to meet both conservation and fisheries management goals. This study examines the efficacy of Philippine marine reserves using meta-analysis by comparing variations in fish density (1) between reserves and adjacent fished reefs (spatial comparison), (2) within reserves before establishment relative to years following the establishment (temporal comparison), and (3) among reserves classified based on size, age, and enforcement capacity. A grand (total) mean of nineteen 22.3 ha coral reef reserves, protected for a mean duration of 8.2 years, were included in the meta-analyses. The overall density of fishes was higher in the reserves compared with the fished reefs and this difference was largely accounted for by exploited fishes. However, the overall density of fishes within the same reserves remained similar from the period before its establishment to several years following its establishment. Only the density of nonexploited fishes increased significantly during years subsequent to the establishment of the reserves. Neither age nor size of reserves correlated with pattern of change in fish density following the establishment of the reserves; however, fish density was consistently higher in larger and older reserves relative to smaller and younger reserves in the spatial comparison. Furthermore, well-enforced reserves had higher density of exploited fishes relative to less-enforced reserves in both spatial and temporal comparisons. In general, the magnitude and trajectory of change in fish density following the establishment of Philippine marine reserves are influenced by (1) functional groups of fishes under consideration, (2) size and age of the reserve, and (3) level of enforcement of the regulatory mechanisms necessary to sustain a marine reserve.

  10. Analysis of Combustion Trajectories of Advanced Combustion Modes in a CIDI Engine with a Two-Zone Phenomenological Model

    SciTech Connect

    Gao, Zhiming; Daw, C Stuart; Wagner, Robert M; Sluder, Scott; Green Jr, Johney Boyd

    2011-01-01

    We describe a two-zone phenomenological model for simulating in-cylinder details in conventional, highdilution, and high-efficiency clean combustion in a diesel engine. Using this model we characterize the differences in these combustion modes in terms of 3D trajectories involving equivalence ratio, flame temperature, and oxygen mass fraction. These trajectories in turn make it possible to better understand the relative NOx and particulate emissions of the different modes. The two-zone model predictions are shown to be consistent with more detailed CFD simulations and provide the benefit of very rapid simulation.

  11. 3D bloodstain pattern analysis: ballistic reconstruction of the trajectories of blood drops and determination of the centres of origin of the bloodstains.

    PubMed

    Buck, Ursula; Kneubuehl, Beat; Näther, Silvio; Albertini, Nicola; Schmidt, Lars; Thali, Michael

    2011-03-20

    For crime scene investigation in cases of homicide, the pattern of bloodstains at the incident site is of critical importance. The morphology of the bloodstain pattern serves to determine the approximate blood source locations, the minimum number of blows and the positioning of the victim. In the present work, the benefits of the three-dimensional bloodstain pattern analysis, including the ballistic approximation of the trajectories of the blood drops, will be demonstrated using two illustrative cases. The crime scenes were documented in 3D, using the non-contact methods digital photogrammetry, tachymetry and laser scanning. Accurate, true-to-scale 3D models of the crime scenes, including the bloodstain pattern and the traces, were created. For the determination of the areas of origin of the bloodstain pattern, the trajectories of up to 200 well-defined bloodstains were analysed in CAD and photogrammetry software. The ballistic determination of the trajectories was performed using ballistics software. The advantages of this method are the short preparation time on site, the non-contact measurement of the bloodstains and the high accuracy of the bloodstain analysis. It should be expected that this method delivers accurate results regarding the number and position of the areas of origin of bloodstains, in particular the vertical component is determined more precisely than using conventional methods. In both cases relevant forensic conclusions regarding the course of events were enabled by the ballistic bloodstain pattern analysis. PMID:20598820

  12. 3D bloodstain pattern analysis: ballistic reconstruction of the trajectories of blood drops and determination of the centres of origin of the bloodstains.

    PubMed

    Buck, Ursula; Kneubuehl, Beat; Näther, Silvio; Albertini, Nicola; Schmidt, Lars; Thali, Michael

    2011-03-20

    For crime scene investigation in cases of homicide, the pattern of bloodstains at the incident site is of critical importance. The morphology of the bloodstain pattern serves to determine the approximate blood source locations, the minimum number of blows and the positioning of the victim. In the present work, the benefits of the three-dimensional bloodstain pattern analysis, including the ballistic approximation of the trajectories of the blood drops, will be demonstrated using two illustrative cases. The crime scenes were documented in 3D, using the non-contact methods digital photogrammetry, tachymetry and laser scanning. Accurate, true-to-scale 3D models of the crime scenes, including the bloodstain pattern and the traces, were created. For the determination of the areas of origin of the bloodstain pattern, the trajectories of up to 200 well-defined bloodstains were analysed in CAD and photogrammetry software. The ballistic determination of the trajectories was performed using ballistics software. The advantages of this method are the short preparation time on site, the non-contact measurement of the bloodstains and the high accuracy of the bloodstain analysis. It should be expected that this method delivers accurate results regarding the number and position of the areas of origin of bloodstains, in particular the vertical component is determined more precisely than using conventional methods. In both cases relevant forensic conclusions regarding the course of events were enabled by the ballistic bloodstain pattern analysis.

  13. Cluster Analysis of the Trajectories for Forecasted Transport of Air Pollutants using WRF and HYSPLIT Models over Istanbul for January and July, 2009

    NASA Astrophysics Data System (ADS)

    Acar, M.; Balli, C.; Caglar, F.; Tan, E.; Onol, B.; Karan, H.; Unal, Y.

    2012-04-01

    forecast and WRF simulations are closer to the observations below 850hPa level. These comparisons increase our confidence on WRF simulations and associated forward trajectories below 850hPa level. Our analysis shows that the WRF model results and ECMWF forecast data have in good agreement for both January and July clusters especially for the levels of 10m, 500m, and 2000m for January and 10m and 500m for July. The cluster analyses of forward trajectories indicate that the predominant flow regime is northeasterly in both January and July. On the other hand, the longest trajectory is southwesterly in January but it is northeasterly in July indicating that the stronger flows dominate these directions. It is also estimated that the trajectories extend longer in January than July to the Northern part of Turkey for each cluster because of the stronger winds prevailing during winter months in association with synoptic scale systems. The distance between the trajectories end points and the source location is shorter in July due to relatively weak winds and it is estimated that only the Southern part of Turkey might be under the influence of particulates and gases released from Istanbul. Key words: Turkey, cluster analysis, trajectory analysis, WRF, HYSPLIT models.

  14. The Longitudinal Interplay of Adolescents' Self-Esteem and Body Image: A Conditional Autoregressive Latent Trajectory Analysis

    ERIC Educational Resources Information Center

    Morin, Alexandre J. S.; Maiano, Christophe; Marsh, Herbert W.; Janosz, Michel; Nagengast, Benjamin

    2011-01-01

    Self-esteem and body image are central to coping successfully with the developmental challenges of adolescence. However, the current knowledge surrounding self-esteem and body image is fraught with controversy. This study attempts to clarify some of them by addressing three questions: (1) Are the intraindividual developmental trajectories of…

  15. Jettison Engineering Trajectory Tool

    NASA Technical Reports Server (NTRS)

    Zaczek, Mariusz; Walter, Patrick; Pascucci, Joseph; Armstrong, Phyllis; Hallbick, Patricia; Morgan, Randal; Cooney, James

    2013-01-01

    The Jettison Engineering Trajectory Tool (JETT) performs the jettison analysis function for any orbiting asset. It provides a method to compute the relative trajectories between an orbiting asset and any jettisoned item (intentional or unintentional) or sublimating particles generated by fluid dumps to assess whether an object is safe to jettison, or if there is a risk with an item that was inadvertently lost overboard. The main concern is the interaction and possible recontact of the jettisoned object with an asset. This supports the analysis that jettisoned items will safely clear the vehicle, ensuring no collisions. The software will reduce the jettison analysis task from one that could take days to complete to one that can be completed in hours, with an analysis that is more comprehensive than the previous method. It provides the ability to define the jettison operation relative to International Space Station (ISS) structure, and provides 2D and 3D plotting capability to allow an analyst to perform a subjective clearance assessment with ISS structures. The developers followed the SMP to create the code and all supporting documentation. The code makes extensive use of the object-oriented format of Java and, in addition, the Model-View-Controller architecture was used in the organization of the code, allowing each piece to be independent of updates to the other pieces. The model category is for maintaining data entered by the user and generated by the analysis. The view category provides capabilities for data entry and displaying all or a portion of the analysis data in tabular, 2D, and 3D representation. The controller category allows for handling events that affect the model or view(s). The JETT utilizes orbital mechanics with complex algorithms. Since JETT is written in JAVA, it is essentially platform-independent.

  16. Trajectories of depressive symptoms after hip fracture

    PubMed Central

    Cristancho, P.; Lenze, E. J.; Avidan, M. S.; Rawson, K. S.

    2016-01-01

    Background Hip fracture is often complicated by depressive symptoms in older adults. We sought to characterize trajectories of depressive symptoms arising after hip fracture and examine their relationship with functional outcomes and walking ability. We also investigated clinical and psychosocial predictors of these trajectories. Method We enrolled 482 inpatients, aged ≥60 years, who were admitted for hip fracture repair at eight St Louis, MO area hospitals between 2008 and 2012. Participants with current depression diagnosis and/or notable cognitive impairment were excluded. Depressive symptoms and functional recovery were assessed with the Montgomery–Asberg Depression Rating Scale and Functional Recovery Score, respectively, for 52 weeks after fracture. Health, cognitive, and psychosocial variables were gathered at baseline. We modeled depressive symptoms using group-based trajectory analysis and subsequently identified correlates of trajectory group membership. Results Three trajectories emerged according to the course of depressive symptoms, which we termed ‘resilient’, ‘distressed’, and ‘depressed’. The depressed trajectory (10% of participants) experienced a persistently high level of depressive symptoms and a slower time to recover mobility than the other trajectory groups. Stressful life events prior to the fracture, current smoking, higher anxiety, less social support, antidepressant use, past depression, and type of implant predicted membership of the depressed trajectory. Conclusions Depressive symptoms arising after hip fracture are associated with poorer functional status. Clinical and psychosocial variables predicted membership of the depression trajectory. Early identification and intervention of patients in a depressive trajectory may improve functional outcomes after hip fracture. PMID:27032698

  17. Ballute Aerocapture Trajectories at Neptune

    NASA Technical Reports Server (NTRS)

    Lyons, Daniel T.; Johnson, Wyatt

    2004-01-01

    Using an inflatable ballute system for aerocapture at planets and moons with atmospheres has the potential to provide significant performance benefits compared not only to traditional all propulsive capture, but also to aeroshell based aerocapture technologies. This paper discusses the characteristics of entry trajectories for ballute aerocapture at Neptune. These trajectories are the first steps in a larger systems analysis effort that is underway to characterize and optimize the performance of a ballute aerocapture system for future missions not only at Neptune, but also the other bodies with atmospheres.

  18. Coupling CP-MD simulations and X-ray absorption spectroscopy: exploring the structure of oxaliplatin in aqueous solution.

    PubMed

    Beret, Elizabeth C; Provost, Karine; Müller, Diane; Marcos, Enrique Sánchez

    2009-09-10

    A combined experimental-theoretical approach applying X-ray absorption spectroscopy and ab initio molecular dynamics (CP-MD) simulations is used to get insight into the structural determination of oxaliplatin, a third-generation anticancer drug of the cisplatin family, in aqueous solution. Experimental Pt L(III)-edge EXAFS and XANES spectra of oxaliplatin in water are compared with theoretical XAS spectra. The latter are obtained as statistically averaged spectra computed for a set of selected snapshots extracted from the MD trajectory of ethyldiamineoxalatoplatinum(II) (EDO-Pt) in liquid water. This compound is a simplified structure of oxaliplatin, where the outer part of the cyclohexane ring contained in the cyclohexanediamine ligand of oxaliplatin has been removed. We show that EDO-Pt is an appropriate model to simulate the spectroscopical properties of oxaliplatin given that the cyclohexane ring does not generate particular features in neither the EXAFS nor the XANES spectra. The computation of average EXAFS spectra using structures from the MD simulation in which atoms are selected according to different cutoff radii around the Pt center allows the assignment of spectral features to particular structural motifs, both in k and R-spaces. The outer oxygen atoms of the oxalate ligand (R(Pt-O(II)) = 3.97 +/- 0.03 A) are responsible for a well-defined hump at around 6.5 A(-1) in the k(2)-weighted EXAFS spectrum. The conventional EXAFS analysis data procedure is reexamined by its application to the simulated average EXAFS spectra. The structural parameters resulting from the fit may then be compared with those obtained from the simulation, providing an estimation of the methodological error associated with the global fitting procedure. A thorough discussion on the synergy between the experimental and theoretical XAS approaches is presented, and evidence for the detection of a slight hydration structure around the Pt complex is shown, leading to the suggestion of a

  19. Particle Trajectory and Icing Analysis of the E(sup 3) Turbofan Engine Using LEWICE3D Version 3

    NASA Technical Reports Server (NTRS)

    Bidwell, Colin S.

    2011-01-01

    Particle trajectory and ice shape calculations were made for the Energy Efficient Engine (E(sup 3)) using the LEWICE3D Version 3 software. The particle trajectory and icing computations were performed using the new "block-to-block" collection efficiency method which has been incorporated into the LEWICE3D Version 3 software. The E(sup 3) was developed by NASA and GE in the early 1980 s as a technology demonstrator and is representative of a modern high bypass turbofan engine. The E(sup 3) flow field was calculated using the NASA Glenn ADPAC turbomachinery flow solver. Computations were performed for the low pressure compressor of the E(sup 3) for a Mach 0.8 cruise condition at 11,887 m assuming a standard warm day for three drop sizes and two drop distributions typically used in aircraft design and certification. Particle trajectory computations were made for water drop sizes of 5, 20, and 100 microns. Particle trajectory and ice shape predictions were made for a 20 micron Langmuir-D distribution and for a 92 mm Super-cooled Large Droplet (SLD) distribution with and without splashing effects for a Liquid Water Content (LWC) of 0.3 g/cu m and an icing time of 30 min. The E3 fan and spinner combination proved to be an effective ice removal mechanism as they removed greater than 36 percent of the mass entering the inlet for the icing cases. The maximum free stream catch fraction for the fan and spinner combination was 0.60 while that on the elements downstream of the fan was 0.03. The non-splashing trajectory and collection efficiency results showed that as drop size increased impingement rates increased on the spinner and fan leaving less mass to impinge on downstream components. The SLD splashing case yielded more mass downstream of the fan than the SLD non-splashing case due to mass being splashed from the upstream inlet lip, spinner and fan components. The ice shapes generated downstream of the fan were either small or nonexistent due to the small available mass

  20. Back-trajectory analysis of African dust outbreaks at a coastal city in southern Spain: Selection of starting heights and assessment of African and concurrent Mediterranean contributions

    NASA Astrophysics Data System (ADS)

    Cabello, M.; Orza, J. A. G.; Dueñas, C.; Liger, E.; Gordo, E.; Cañete, S.

    2016-09-01

    The present study uses a back-trajectory analysis at multiple heights for better interpretation of the impact of the African dust outbreaks in the coastal Mediterranean city of Málaga (Spain), the southernmost large city in Europe. Throughout a 3-year period, 363 days were identified as dusty days by atmospheric transport models. During these events, PM10, SO2, O3, temperature, AOD and Ångström exponent showed statistically significant differences compared to days with no African dust. It was found that under African dust events, the study site was influenced by Mediterranean air masses at the lowermost heights and by Atlantic advections at high altitudes, while African air masses mostly reached Málaga at intermediate levels. Specifically, the lowest heights at which air masses reached the study site after having resided over Africa are confined into the 1000-2000 m range. The decoupling between the lowest heights and the ones for dust transport may explain the presence of aged air masses at the time of the African outbreak. Additionally, with the aim of studying the influence of the air mass origin and history on air quality, a new procedure based on Principal component analysis (PCA) is proposed to determine which altitudes are best suited as starting points for back-trajectory calculations, as they maximize the differences in residence time over different areas. Its application to Málaga identifies three altitudes (750, 2250 and 4500 m) and a subsequent analysis of back-trajectories for African dust days provided the main source areas over Africa as well as further insight on the Mediterranean contribution.

  1. Trajectories of Posttraumatic Stress Among Urban Residents

    PubMed Central

    Galea, Sandro; Uddin, Monica; Koenen, Karestan C.

    2014-01-01

    Urban residents experience a wide range of traumatic events and are at increased risk of assaultive violence. Although previous research has examined trajectories of posttraumatic stress (PTS) through latent class growth analysis (LCGA) among persons exposed to the same index events (e.g., a natural disaster), PTS trajectories have not been documented among urban residents. The aims of this study were to conduct LGCA with a sample of trauma survivors from Detroit, Michigan (N = 981), and to explore predictors of trajectory membership. Participants completed three annual telephone surveys, each of which included the posttraumatic stress disorder (PTSD) Check-list-Civilian Version. Four PTS trajectories were detected. Although the majority evidenced a trajectory of consistently few symptoms (Low: 72.5 %), 4.6 % were in a trajectory of chronic severe PTSD (High), and the remainder were in trajectories of consistently elevated, but generally subclinical, levels of PTS (Decreasing: 12.3 %; Increasing: 10.6 %). Socioeconomic disadvantage (e.g., lower income), more extensive trauma history (e.g., childhood abuse), and fewer social resources (e.g., lower social support) were associated with membership in higher PTS trajectories, relative to the Low trajectory. The results suggest that efforts to reduce PTS in urban areas need to attend to socioeconomic vulnerabilities in addition to trauma history and risk for ongoing trauma exposure. PMID:24469249

  2. Trajectories of Martian Habitability

    PubMed Central

    2014-01-01

    Abstract Beginning from two plausible starting points—an uninhabited or inhabited Mars—this paper discusses the possible trajectories of martian habitability over time. On an uninhabited Mars, the trajectories follow paths determined by the abundance of uninhabitable environments and uninhabited habitats. On an inhabited Mars, the addition of a third environment type, inhabited habitats, results in other trajectories, including ones where the planet remains inhabited today or others where planetary-scale life extinction occurs. By identifying different trajectories of habitability, corresponding hypotheses can be described that allow for the various trajectories to be disentangled and ultimately a determination of which trajectory Mars has taken and the changing relative abundance of its constituent environments. Key Words: Mars—Habitability—Liquid water—Planetary science. Astrobiology 14, 182–203. PMID:24506485

  3. Trajectories of martian habitability.

    PubMed

    Cockell, Charles S

    2014-02-01

    Beginning from two plausible starting points-an uninhabited or inhabited Mars-this paper discusses the possible trajectories of martian habitability over time. On an uninhabited Mars, the trajectories follow paths determined by the abundance of uninhabitable environments and uninhabited habitats. On an inhabited Mars, the addition of a third environment type, inhabited habitats, results in other trajectories, including ones where the planet remains inhabited today or others where planetary-scale life extinction occurs. By identifying different trajectories of habitability, corresponding hypotheses can be described that allow for the various trajectories to be disentangled and ultimately a determination of which trajectory Mars has taken and the changing relative abundance of its constituent environments.

  4. Trajectories of martian habitability.

    PubMed

    Cockell, Charles S

    2014-02-01

    Beginning from two plausible starting points-an uninhabited or inhabited Mars-this paper discusses the possible trajectories of martian habitability over time. On an uninhabited Mars, the trajectories follow paths determined by the abundance of uninhabitable environments and uninhabited habitats. On an inhabited Mars, the addition of a third environment type, inhabited habitats, results in other trajectories, including ones where the planet remains inhabited today or others where planetary-scale life extinction occurs. By identifying different trajectories of habitability, corresponding hypotheses can be described that allow for the various trajectories to be disentangled and ultimately a determination of which trajectory Mars has taken and the changing relative abundance of its constituent environments. PMID:24506485

  5. The organic analysis and carbon chemistry of lunar samples: Their significance for exobiology; Proceedings of the Conference, University of Maryland, College Park, Md., October 26-28, 1971.

    NASA Technical Reports Server (NTRS)

    1972-01-01

    Various methods used in the organic analysis of lunar samples are reviewed. The scope, advantages, and limitations of these methods are discussed, with particular emphasis on possible sources of contamination and experimental artifacts inherent in their use. A broad survey of the organogenic elements and compounds found in lunar samples covers the search for biogenic structures and viable organisms; the abundance and isotopic composition of various elements and compounds; the search for porphyrins, amino acids, or amino acid precursors; and the presence of heterocylics, aromatic hydrocarbons, and other organic compounds. The sources of the organogenic elements and compounds detected in lunar samples are discussed. The significance of the lunar organic analysis for exobiology is discussed in terms of its relevance to and implications for the studies of chemical evolution and terrestrial organic geochemistry. Individual items are announced in this issue.

  6. Center of excellence for mobile sensor data-to-knowledge (MD2K).

    PubMed

    Kumar, Santosh; Abowd, Gregory D; Abraham, William T; al'Absi, Mustafa; Beck, J Gayle; Chau, Duen Horng; Condie, Tyson; Conroy, David E; Ertin, Emre; Estrin, Deborah; Ganesan, Deepak; Lam, Cho; Marlin, Benjamin; Marsh, Clay B; Murphy, Susan A; Nahum-Shani, Inbal; Patrick, Kevin; Rehg, James M; Sharmin, Moushumi; Shetty, Vivek; Sim, Ida; Spring, Bonnie; Srivastava, Mani; Wetter, David W

    2015-11-01

    Mobile sensor data-to-knowledge (MD2K) was chosen as one of 11 Big Data Centers of Excellence by the National Institutes of Health, as part of its Big Data-to-Knowledge initiative. MD2K is developing innovative tools to streamline the collection, integration, management, visualization, analysis, and interpretation of health data generated by mobile and wearable sensors. The goal of the big data solutions being developed by MD2K is to reliably quantify physical, biological, behavioral, social, and environmental factors that contribute to health and disease risk. The research conducted by MD2K is targeted at improving health through early detection of adverse health events and by facilitating prevention. MD2K will make its tools, software, and training materials widely available and will also organize workshops and seminars to encourage their use by researchers and clinicians. PMID:26555017

  7. Center of excellence for mobile sensor data-to-knowledge (MD2K)

    PubMed Central

    Kumar, Santosh; Abowd, Gregory D; Abraham, William T; al’Absi, Mustafa; Gayle Beck, J; Chau, Duen Horng; Condie, Tyson; Conroy, David E; Ertin, Emre; Estrin, Deborah; Ganesan, Deepak; Lam, Cho; Marlin, Benjamin; Marsh, Clay B; Murphy, Susan A; Nahum-Shani, Inbal; Patrick, Kevin; Rehg, James M; Sharmin, Moushumi; Shetty, Vivek; Sim, Ida; Spring, Bonnie; Srivastava, Mani; Wetter, David W

    2015-01-01

    Mobile sensor data-to-knowledge (MD2K) was chosen as one of 11 Big Data Centers of Excellence by the National Institutes of Health, as part of its Big Data-to-Knowledge initiative. MD2K is developing innovative tools to streamline the collection, integration, management, visualization, analysis, and interpretation of health data generated by mobile and wearable sensors. The goal of the big data solutions being developed by MD2K is to reliably quantify physical, biological, behavioral, social, and environmental factors that contribute to health and disease risk. The research conducted by MD2K is targeted at improving health through early detection of adverse health events and by facilitating prevention. MD2K will make its tools, software, and training materials widely available and will also organize workshops and seminars to encourage their use by researchers and clinicians. PMID:26555017

  8. An Examination of "The Martian" Trajectory

    NASA Technical Reports Server (NTRS)

    Burke, Laura

    2015-01-01

    This analysis was performed to support a request to examine the trajectory of the Hermes vehicle in the novel "The Martian" by Andy Weir. Weir developed his own tool to perform the analysis necessary to provide proper trajectory information for the novel. The Hermes vehicle is the interplanetary spacecraft that shuttles the crew to and from Mars. It is notionally a Nuclear powered vehicle utilizing VASIMR engines for propulsion. The intent of this analysis was the determine whether the trajectory as it was outlined in the novel is consistent with the rules of orbital mechanics.

  9. Obituary of Philip H. Cooper, MD.

    PubMed

    Patterson, James W; Wick, Mark R; Mills, Stacey E

    2015-08-01

    Dermatopathology lost a giant in the field with the death of Philip H. Cooper, MD, on Friday, January 30, 2015. The following obituary represents a celebration of his life and his contributions to our field.

  10. Identification of nitrogen dioxide and ozone source regions for an urban area in Korea using back trajectory analysis

    NASA Astrophysics Data System (ADS)

    Vellingiri, Kowsalya; Kim, Ki-Hyun; Lim, Jong-Myoung; Lee, Jin-Hong; Ma, Chang-Jin; Jeon, Byong-Hun; Sohn, Jong-Ryeul; Kumar, Pawan; Kang, Chang-Hee

    2016-07-01

    The NO2 and O3 in an urban background site of Seoul, Korea (Yongsan), were analyzed using hourly data collected from 2005 to 2013. The potential role of meteorological parameters in controlling air quality at the receptor site was analyzed using a conditional probability function. In addition, the relative contributions of such variables were examined for special cases (i.e., more than 60 ppb of NO2 and O3) with the help of trajectory. A potential source contribution function with a grid size resolution of 0.25° × 0.25° was used to determine the potential exogenous sources of NO2 and O3 for the study area. The results of both the trajectory and potential source contribution function analyses suggest that both the northern China region and local emission sources are the most influential source pathways contributing to the recent increase in NO2 concentration at the study site. In the case of O3, this role was shared by both oceanic and mountainous regions of China and Japan.

  11. Variation in trajectories of women's marital quality.

    PubMed

    James, Spencer L

    2015-01-01

    I examine variation in trajectories of women's marital quality across the life course. The analysis improves upon earlier research in three ways: (1) the analysis uses a sequential cohort design and data from the first 35years of marriage; (2) I analyze rich data from a national sample; (3) I examine multiple dimensions of marital quality. Latent class growth analyses estimated on data from women in the National Longitudinal Survey of Youth-1979 (N=2604) suggest multiple trajectories for each of three dimensions of marital quality, including two trajectories of marital happiness, two trajectories of marital communication, and three trajectories of marital conflict. Socioeconomic and demographic covariates are then used to illustrate how factors such as income, cohabitation, and race-ethnicity set individuals at risk of poor marital quality throughout the life course by differentiating between high and low trajectories of marital quality. Women on low marital quality trajectories are, as expected, at much greater risk of divorce. Taken together, these findings show how fundamental socioeconomic and demographic characteristics contribute to subsequent marital outcomes via their influence on trajectories of marital quality as well as providing a better picture of the complexity in contemporary patterns of marital quality.

  12. VIEW IN OPPOSITE DIRECTION AS MD1351 AND MD1352. RAW MATERIAL ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    VIEW IN OPPOSITE DIRECTION AS MD-135-1 AND MD-135-2. RAW MATERIAL CONVEYOR AT LEFT DEPOSITS SHELL INTO MILLING MACHINE AT LOWER LEFT. ENGINE IS AT LOWER RIGHT AND RADIATOR AT LOWER CENTER. ROLLER SORTER IS AT TOP OF CONVEYOR. - F. & H. Benning Company Oyster Mill, 14430 Solomons Island Road (moved from 1014 Benning Road, Galesville, Anne Arundel County, Maryland), Solomons, Calvert County, MD

  13. Evolutionary trajectory of channel planforms in the middle Garonne River (Toulouse, SW France) over a 130-year period: Contribution of mixed multiple factor analysis (MFAmix)

    NASA Astrophysics Data System (ADS)

    David, Mélodie; Labenne, Amaury; Carozza, Jean-Michel; Valette, Philippe

    2016-04-01

    The purpose of this study is to propose a methodological essay for defining evolutionary trajectories of channel planforms and to examine the channel change in the middle Garonne River (southwest France) over a 130-year period. The study focuses on a reach of ~ 90 km situated downstream from the city of Toulouse. A set of four historical maps (1868, 1940s, 1970s, and 2000s) is used to build a geomorphometric diachronic database. Data processing through mixed multiple factor analysis (MFAmix) and hierarchical cluster analysis (HCA) allows distinction between four homogeneous zones within the study reach, depending on their evolutionary trajectories. Channel behavior in the upstream and median zones evolved as of the beginning of the study period (narrowing of the fluvial area, colonization by vegetation, and removal of alluvial bars), likely owing to punctual anthropogenic actions. The downstream zone is characterized by stabilization of the channel and alluvial bar removal over the second half of the twentieth century, coinciding with the campaign undertaken by French local authorities between 1960 and 1984 to protect river banks. The role of climate transition between the Little Ice Age (LIA) and the onset of the Global Warming period (GW) is also discussed. Results generally are consistent with the chronology established for most European rivers.

  14. Determination of Delta m(d) and absolute calibration of flavor taggers for the Delta m(s) analysis, in fully reconstructed decays at the CDF experiment

    SciTech Connect

    Gomez, Jonatan Piedra

    2005-04-21

    The new trigger processor, the Silicon Vertex Tracking (SVT), has dramatically improved the B physics capabilities of the upgraded CDF II Detector; for the first time in a hadron collider, the SVT has enabled the access to non-lepton-triggered B meson decays. Within the new available range of decay modes, the B$0\\atop{s}$ → D$-\\atop{s}$π+ signature is of paramount importance in the measurement of the Δms mixing frequency. The analysis reported here is a step towards the measurement of this frequency; two where our goals: carrying out the absolute calibration of the opposite side flavor taggers, used in the Δms measurement; and measuring the B$0\\atop{d}$ mixing frequency in a B → Dπ sample, establishing the feasibility of the mixing measurement in this sample whose decay-length is strongly biased by the selective SVT trigger. We analyze a total integrated luminosity of 355 pb-1 collected with the CDF II Detector. By triggering on muons, using the conventional di-muon trigger; or displaced tracks, using the SVT trigger, we gather a sample rich in bottom and charm mesons.

  15. Cooling channels design analysis with chaotic laminar trajectory for closed cathode air-cooled PEM fuel cells using non-reacting numerical approach

    NASA Astrophysics Data System (ADS)

    N, W. Mohamed W. A.

    2015-09-01

    The thermal management of Polymer Electrolyte Membrane (PEM) fuel cells contributes directly to the overall power output of the system. For a closed cathode PEM fuel cell design, the use of air as a cooling agent is a non-conventional method due to the large heat load involved, but it offers a great advantage for minimizing the system size. Geometrical aspects of the cooling channels have been identified as the basic parameter for improved cooling performance. Numerical investigation using STAR-CCM computational fluid dynamics platform was applied for non-reacting cooling effectiveness study of various channel geometries for fuel cell application. The aspect ratio of channels and the flow trajectory are the parametric variations. A single cooling plate domain was selected with an applied heat flux of 2400 W/m2 while the cooling air are simulated at Reynolds number of 400 that corresponds to normal air flow velocities using standard 6W fans. Three channel designs of similar number of channels (20 channels) are presented here to analyze the effects of having chaotic laminar flow trajectory compared to the usual straight path trajectory. The total heat transfer between the cooling channel walls and coolant were translated into temperature distribution, maximum temperature gradient, average plate temperature and overall cooling effectiveness analyses. The numerical analysis shows that the chaotic flow promotes a 5% to 10% improvement in cooling effectiveness, depending on the single-axis or multi-axis flow paths applied. Plate temperature uniformity is also more realizable using the chaotic flow designs.

  16. Energy dissipation and scattering angle distribution analysis of the classical trajectory calculations of methane scattering from a Ni(111) surface

    NASA Astrophysics Data System (ADS)

    Milot, Robin; Kleyn, A. W.; Jansen, A. P. J.

    2001-08-01

    We present classical trajectory calculations of the rotational vibrational scattering of a nonrigid methane molecule from a Ni(111) surface. Energy dissipation and scattering angles have been studied as a function of the translational kinetic energy, the incidence angle, the (rotational) nozzle temperature, and the surface temperature. Scattering angles are somewhat toward the surface for the incidence angles of 30°, 45°, and 60° at a translational energy of 96 kJ/mol. Energy loss is primarily from the normal component of the translational energy. It is transferred for somewhat more than half to the surface and the rest is transferred mostly to rotational motion. The spread in the change of translational energy has a basis in the spread of the transfer to rotational energy, and can be enhanced by raising of the surface temperature through the transfer process to the surface motion.

  17. Seasonal variability of tritium and ion concentrations in rain at Kumamoto, Japan and back-trajectory analysis of air mass

    SciTech Connect

    Momoshima, N.; Sugihara, S.; Toyoshima, T.; Nagao, Y.; Takahashi, M.; Nakamura, Y.

    2008-07-15

    Tritium and major ion concentrations in rain were analyzed in Kumamoto (Japan)) between 2001 and 2006 to examine present tritium concentration and seasonal variation. The average tritium concentration was 0.36 {+-} 0.19 Bq/L (n=104) and higher tritium concentrations were observed in spring than the other seasons. Among the ions, non-sea-salt (nss) SO{sub 4}{sup 2}'- showed higher concentration in winter while other ions did not show marked increase in winter. Based on the back-trajectory analyses of air masses, the increase in tritium concentrations in spring arises from downward movement of naturally produced tritium from stratosphere to troposphere, while the increase of the nss-SO{sub 4}{sup 2-} concentrations in winter is due to long range transport of pollutants from China to Japan. (authors)

  18. Preliminary Analysis of Low-Thrust Gravity Assist Trajectories by An Inverse Method and a Global Optimization Technique.

    NASA Astrophysics Data System (ADS)

    de Pascale, P.; Vasile, M.; Casotto, S.

    The design of interplanetary trajectories requires the solution of an optimization problem, which has been traditionally solved by resorting to various local optimization techniques. All such approaches, apart from the specific method employed (direct or indirect), require an initial guess, which deeply influences the convergence to the optimal solution. The recent developments in low-thrust propulsion have widened the perspectives of exploration of the Solar System, while they have at the same time increased the difficulty related to the trajectory design process. Continuous thrust transfers, typically characterized by multiple spiraling arcs, have a broad number of design parameters and thanks to the flexibility offered by such engines, they typically turn out to be characterized by a multi-modal domain, with a consequent larger number of optimal solutions. Thus the definition of the first guesses is even more challenging, particularly for a broad search over the design parameters, and it requires an extensive investigation of the domain in order to locate the largest number of optimal candidate solutions and possibly the global optimal one. In this paper a tool for the preliminary definition of interplanetary transfers with coast-thrust arcs and multiple swing-bys is presented. Such goal is achieved combining a novel methodology for the description of low-thrust arcs, with a global optimization algorithm based on a hybridization of an evolutionary step and a deterministic step. Low thrust arcs are described in a 3D model in order to account the beneficial effects of low-thrust propulsion for a change of inclination, resorting to a new methodology based on an inverse method. The two-point boundary values problem (TPBVP) associated with a thrust arc is solved by imposing a proper parameterized evolution of the orbital parameters, by which, the acceleration required to follow the given trajectory with respect to the constraints set is obtained simply through

  19. Trajectory bending and energy spreading of charged ions in time-of-flight telescopes used for ion beam analysis

    NASA Astrophysics Data System (ADS)

    Laitinen, Mikko; Sajavaara, Timo

    2014-04-01

    Carbon foil time pick-up detectors are widely used in pairs in ion beam applications as time-of-flight detectors. These detectors are suitable for a wide energy range and for all ions but at the lowest energies the tandem effect limits the achievable time of flight and therefore the energy resolution. Tandem effect occurs when an ion passes the first carbon foil of the timing detector and its charge state is changed. As the carbon foil of the first timing detector has often a non-zero voltage the ion can accelerate or decelerate before and after the timing detector. The combination of different charge state properties before and after the carbon foil now induces spread to the measured times of flight. We have simulated different time pick-up detector orientations, voltages, ions and ion energies to examine the tandem effect in detail and found out that the individual timing detector orientation and the average ion charge state have a very small influence to the magnitude of the tandem effect. On the other hand, the width of the charge state distribution for particular ion and energy in the first carbon foil, and the carbon foil voltage contributes linearly to the magnitude of the tandem effect. In the simulations low energy light ion trajectories were observed to bend in the electric fields of the first timing gate, and the magnitude of this bending was studied. It was found out that 50-150 keV proton trajectories can even bend outside the second timing gate.

  20. Trajectories of delinquency and parenting styles.

    PubMed

    Hoeve, Machteld; Blokland, Arjan; Dubas, Judith Semon; Loeber, Rolf; Gerris, Jan R M; van der Laan, Peter H

    2008-02-01

    We investigated trajectories of adolescent delinquent development using data from the Pittsburgh Youth Study and examined the extent to which these different trajectories are differentially predicted by childhood parenting styles. Based on self-reported and official delinquency seriousness, covering ages 10-19, we identified five distinct delinquency trajectories differing in both level and change in seriousness over time: a nondelinquent, minor persisting, moderate desisting, serious persisting, and serious desisting trajectory. More serious delinquents tended to more frequently engage in delinquency, and to report a higher proportion of theft. Proportionally, serious persistent delinquents were the most violent of all trajectory groups. Using cluster analysis we identified three parenting styles: authoritative, authoritarian (moderately supportive), and neglectful (punishing). Controlling for demographic characteristics and childhood delinquency, neglectful parenting was more frequent in moderate desisters, serious persisters, and serious desisters, suggesting that parenting styles differentiate non- or minor delinquents from more serious delinquents.

  1. Trajectories of Delinquency and Parenting Styles

    PubMed Central

    Blokland, Arjan; Dubas, Judith Semon; Loeber, Rolf; Gerris, Jan R. M.; van der Laan, Peter H.

    2007-01-01

    We investigated trajectories of adolescent delinquent development using data from the Pittsburgh Youth Study and examined the extent to which these different trajectories are differentially predicted by childhood parenting styles. Based on self-reported and official delinquency seriousness, covering ages 10–19, we identified five distinct delinquency trajectories differing in both level and change in seriousness over time: a nondelinquent, minor persisting, moderate desisting, serious persisting, and serious desisting trajectory. More serious delinquents tended to more frequently engage in delinquency, and to report a higher proportion of theft. Proportionally, serious persistent delinquents were the most violent of all trajectory groups. Using cluster analysis we identified three parenting styles: authoritative, authoritarian (moderately supportive), and neglectful (punishing). Controlling for demographic characteristics and childhood delinquency, neglectful parenting was more frequent in moderate desisters, serious persisters, and serious desisters, suggesting that parenting styles differentiate non- or minor delinquents from more serious delinquents. PMID:17786548

  2. Studies of the TLR4-associated protein MD-2 using yeast-display and mutational analyses.

    PubMed

    Mattis, Daiva M; Chervin, Adam S; Ranoa, Diana R; Kelley, Stacy L; Tapping, Richard I; Kranz, David M

    2015-12-01

    Bacterial lipopolysaccharide (LPS) activates the innate immune system by forming a complex with myeloid differentiation factor 2 (MD-2) and Toll-like receptor 4 (TLR4), which is present on antigen presenting cells. MD-2 plays an essential role in this activation of the innate immune system as a member of the ternary complex, TLR4:MD-2:LPS. With the goal of further understanding the molecular details of the interaction of MD-2 with LPS and TLR4, and possibly toward engineering dominant negative regulators of the MD-2 protein, here we subjected MD-2 to a mutational analysis using yeast display. The approach included generation of site-directed alanine mutants, and ligand-driven selections of MD-2 mutant libraries. Our findings showed that: (1) proline mutations in the F119-K132 loop that binds LPS were strongly selected for enhanced yeast surface stability, (2) there was a preference for positive-charged side chains (R/K) at residue 120 for LPS binding, and negative-charged side chains (D/E) for TLR4 binding, (3) aromatic residues were strongly preferred at F119 and F121 for LPS binding, and (4) an MD-2 mutant (T84N/D101A/S118A/S120D/K122P) exhibited increased binding to TLR4 but decreased binding to LPS. These studies revealed the impact of specific residues and regions of MD-2 on the binding of LPS and TLR4, and they provide a framework for further directed evolution of the MD-2 protein. PMID:26320630

  3. Trajectory selection for the Mariner Jupiter/Saturn 1977 project

    NASA Technical Reports Server (NTRS)

    Dyer, J. S.; Miles, R. F., Jr.

    1974-01-01

    The use of decision analysis to facilitate a group decision-making problem in the selection of trajectories for the two spacecraft of the Mariner Jupiter/Saturn 1977 Project. A set of 32 candidate trajectory pairs was developed. Cardinal utility function values were assigned to the trajectory pairs, and the data and statistics derived from collective choice rules were used in selecting the science-preferred trajectory pair.

  4. A comparative analysis of the center of gravity and center of pressure trajectory path lengths in standing posture: an estimation of active stiffness.

    PubMed

    Caron, O; Gelat, T; Rougier, P; Blanchi, J P

    2000-08-01

    The center of foot pressure (CP) motions, representing the net neuromuscular control, was compared to the center of gravity (CG) motions, representing the net performance. The comparison focused on the trajectory path length parameter along the medio-lateral and antero-posterior axes because these two variables depend on amplitude versus frequency relationship. This relationship was used to evaluate the CG motions based on the CP motions. Seven subjects stood still on a force plate with eyes open and eyes closed. The results showed that the ratio of (CP-CG)/CP trajectory path length was personal for each subject. These results suggest different levels of passive (ligaments, elastic properties) and active (reflex activity) stiffness. For some subjects, this ratio was significantly lower for the eyes open condition than for the eyes closed condition, indicating a decrease of the active stiffness for the eyes open condition. Therefore, a CG-CP comparative analysis appeared helpful in understanding the control of balance and necessary to quantify the subjects' net performance. PMID:11757569

  5. Dynamic drag force based on iterative density mapping: A new numerical tool for three-dimensional analysis of particle trajectories in a dielectrophoretic system.

    PubMed

    Knoerzer, Markus; Szydzik, Crispin; Tovar-Lopez, Francisco Javier; Tang, Xinke; Mitchell, Arnan; Khoshmanesh, Khashayar

    2016-02-01

    Dielectrophoresis is a widely used means of manipulating suspended particles within microfluidic systems. In order to efficiently design such systems for a desired application, various numerical methods exist that enable particle trajectory plotting in two or three dimensions based on the interplay of hydrodynamic and dielectrophoretic forces. While various models are described in the literature, few are capable of modeling interactions between particles as well as their surrounding environment as these interactions are complex, multifaceted, and computationally expensive to the point of being prohibitive when considering a large number of particles. In this paper, we present a numerical model designed to enable spatial analysis of the physical effects exerted upon particles within microfluidic systems employing dielectrophoresis. The model presents a means of approximating the effects of the presence of large numbers of particles through dynamically adjusting hydrodynamic drag force based on particle density, thereby introducing a measure of emulated particle-particle and particle-liquid interactions. This model is referred to as "dynamic drag force based on iterative density mapping." The resultant numerical model is used to simulate and predict particle trajectory and velocity profiles within a microfluidic system incorporating curved dielectrophoretic microelectrodes. The simulated data are compared favorably with experimental data gathered using microparticle image velocimetry, and is contrasted against simulated data generated using traditional "effective moment Stokes-drag method," showing more accurate particle velocity profiles for areas of high particle density.

  6. New Message Differences for Collision Attacks on MD4 and MD5

    NASA Astrophysics Data System (ADS)

    Sasaki, Yu; Wang, Lei; Kunihiro, Noboru; Ohta, Kazuo

    In 2005, collision resistance of several hash functions was broken by Wang et al. The strategy of determining message differences is the most important part of collision attacks against hash functions. So far, many researchers have tried to analyze Wang et al.'s method and proposed improved collision attacks. Although several researches proposed improved attacks, all improved results so far were based on the same message differences proposed by Wang et al. In this paper, we propose new message differences for collision attacks on MD4 and MD5. Our message differences of MD4 can generate a collision with complexity of less than two MD4 computations, which is faster than the original Wang et al.'s attack, and moreover, than the all previous attacks. This is the first result that improves the complexity of collision attack by using different message differences from Wang et al.'s. Regarding MD5, so far, no other message difference from Wang et al.'s is known. Therefore, study for constructing method of other message differences on MD5 should be interesting. Our message differences of MD5 generates a collision with complexity of 242 MD5 computations, which is slower than the latest best attack. However, since our attack needs only 1 bit difference, it has some advantages in terms of message freedom of collision messages.

  7. Trajectory Browser Website

    NASA Technical Reports Server (NTRS)

    Foster, Cyrus; Jaroux, Belgacem A.

    2012-01-01

    The Trajectory Browser is a web-based tool developed at the NASA Ames Research Center to be used for the preliminary assessment of trajectories to small-bodies and planets and for providing relevant launch date, time-of-flight and V requirements. The site hosts a database of transfer trajectories from Earth to asteroids and planets for various types of missions such as rendezvous, sample return or flybys. A search engine allows the user to find trajectories meeting desired constraints on the launch window, mission duration and delta V capability, while a trajectory viewer tool allows the visualization of the heliocentric trajectory and the detailed mission itinerary. The anticipated user base of this tool consists primarily of scientists and engineers designing interplanetary missions in the context of pre-phase A studies, particularly for performing accessibility surveys to large populations of small-bodies. The educational potential of the website is also recognized for academia and the public with regards to trajectory design, a field that has generally been poorly understood by the public. The website is currently hosted on NASA-internal URL http://trajbrowser.arc.nasa.gov/ with plans for a public release as soon as development is complete.

  8. Risk analysis for rumor propagation in metropolises based on improved 8-state ICSAR model and dynamic personal activity trajectories

    NASA Astrophysics Data System (ADS)

    Zhang, N.; Huang, H.; Duarte, M.; Zhang, J.

    2016-06-01

    Social media has developed extremely fast in metropolises in recent years resulting in more and more rumors disturbing our daily lives. Knowing the characteristics of rumor propagation in metropolises can help the government make efficient rumor refutation plans. In this paper, we established a dynamic spatio-temporal comprehensive risk assessment model for rumor propagation based on an improved 8-state ICSAR model (Ignorant, Information Carrier, Information Spreader, Advocate, Removal), large personal activity trajectory data, and governmental rumor refutation (anti-rumor) scenarios. Combining these relevant data with the 'big' traffic data on the use of subways, buses, and taxis, we simulated daily oral communications among inhabitants in Beijing. In order to analyze rumor and anti-rumor competition in the actual social network, personal resistance, personal preference, conformity, rumor intensity, government rumor refutation and other influencing factors were considered. Based on the developed risk assessment model, a long-term dynamic rumor propagation simulation for a seven day period was conducted and a comprehensive rumor propagation risk distribution map was obtained. A set of the sensitivity analyses were conducted for different social media and propagation routes. We assessed different anti-rumor coverage ratios and the rumor-spreading thresholds at which the government started to launch anti-rumor actions. The results we obtained provide worthwhile references useful for governmental decision making towards control of social-disrupting rumors.

  9. Unavailability of thymidine kinase does not preclude the use of German comprehensive prognostic index: results of an external validation analysis in early chronic lymphocytic leukemia and comparison with MD Anderson Cancer Center model.

    PubMed

    Molica, Stefano; Giannarelli, Diana; Mirabelli, Rosanna; Levato, Luciano; Russo, Antonio; Linardi, Maria; Gentile, Massimo; Morabito, Fortunato

    2016-01-01

    A comprehensive prognostic index that includes clinical (i.e., age, sex, ECOG performance status), serum (i.e., ß2-microglobulin, thymidine kinase [TK]), and molecular (i.e., IGVH mutational status, del 17p, del 11q) markers developed by the German CLL Study Group (GCLLSG) was externally validated in a prospective, community-based cohort consisting of 338 patients with early chronic lymphocytic leukemia (CLL) using as endpoint the time to first treatment (TTFT). Because serum TK was not available, a slightly modified version of the model based on seven instead of eight prognostic variables was used. By German index, 62.9% of patients were scored as having low-risk CLL (score 0-2), whereas 37.1% had intermediate-risk CLL (score 3-5). This stratification translated into a significant difference in the TTFT [HR = 4.21; 95% C.I. (2.71-6.53); P < 0.0001]. Also the 2007 MD Anderson Cancer Center (MDACC) score, barely based on traditional clinical parameters, showed comparable reliability [HR = 2.73; 95% C.I. (1.79-4.17); P < 0.0001]. A comparative performance assessment between the two models revealed that prediction of the TTFT was more accurate with German score. The c-statistic of the MDACC model was 0.65 (range, 0.53-0.78) a level below that of the German index [0.71 (range, 0.60-0.82)] and below the accepted 0.7 threshold necessary to have value at the individual patient level. Results of this external comparative validation analysis strongly support the German score as the benchmark for comparison of any novel prognostic scheme aimed at evaluating the TTFT in patients with early CLL even when a modified version which does not include TK is utilized.

  10. MAVEN's Trajectory to Mars

    NASA Video Gallery

    This movie shows the cruise trajectory of NASA's Mars Atmosphere and Volatile Evolution (MAVEN) mission, which was launched on Nov. 18, 2013. It will arrive at Mars on Sept. 21, 2014, to explore th...

  11. Ornithopter transition trajectories

    NASA Astrophysics Data System (ADS)

    Dietl, John M.; Garcia, Ephrahim

    2010-04-01

    The design of stable trim conditions for forward flight and for hover has been achieved. In forward flight, an ornithopter is configured like a conventional airplane or large bird. Its fuselage is essentially horizontal and the wings heave in a vertical plane. In hover, however, the body pitches vertically so that the wing stroke in the horizontal plane. Thrust directed downward, the vehicle remains aloft while the downdraft envelops the tail to provide enough flow for vehicle control and stabilization. To connect these trajectories dynamically is the goal. The naïve approach-to choose two stable trajectories and switch between them-has been accomplished. A new approach is to establish an open-loop trajectory through a trajectory optimization algorithm-optimized for shortest altitude drop, shortest stopping distance, or lowest energy consumption.

  12. Longitudinal MRI reveals altered trajectory of brain development during childhood and adolescence in fetal alcohol spectrum disorders.

    PubMed

    Treit, Sarah; Lebel, Catherine; Baugh, Lauren; Rasmussen, Carmen; Andrew, Gail; Beaulieu, Christian

    2013-06-12

    Diffusion tensor imaging (DTI) of brain development in fetal alcohol spectrum disorders (FASD) has revealed structural abnormalities, but studies have been limited by the use of cross-sectional designs. Longitudinal scans can provide key insights into trajectories of neurodevelopment within individuals with this common developmental disorder. Here we evaluate serial DTI and T1-weighted volumetric MRI in a human sample of 17 participants with FASD and 27 controls aged 5-15 years who underwent 2-3 scans each, ∼2-4 years apart (92 scans total). Increases of fractional anisotropy and decreases of mean diffusivity (MD) were observed between scans for both groups, in keeping with changes expected of typical development, but mixed-models analysis revealed significant age-by-group interactions for three major white matter tracts: superior longitudinal fasciculus and superior and inferior fronto-occipital fasciculus. These findings indicate altered developmental progression in these frontal-association tracts, with the FASD group notably showing greater reduction of MD between scans. ΔMD is shown to correlate with reading and receptive vocabulary in the FASD group, with steeper decreases of MD in the superior fronto-occipital fasciculus and superior longitudinal fasciculus between scans correlating with greater improvement in language scores. Volumetric analysis revealed reduced total brain, white, cortical gray, and deep gray matter volumes and fewer significant age-related volume increases in the FASD group, although age-by-group interactions were not significant. Longitudinal DTI indicates delayed white matter development during childhood and adolescence in FASD, which may underlie persistent or worsening behavioral and cognitive deficits during this critical period.

  13. Efficient Characterization of Protein Cavities within Molecular Simulation Trajectories: trj_cavity.

    PubMed

    Paramo, Teresa; East, Alexandra; Garzón, Diana; Ulmschneider, Martin B; Bond, Peter J

    2014-05-13

    Protein cavities and tunnels are critical in determining phenomena such as ligand binding, molecular transport, and enzyme catalysis. Molecular dynamics (MD) simulations enable the exploration of the flexibility and conformational plasticity of protein cavities, extending the information available from static experimental structures relevant to, for example, drug design. Here, we present a new tool (trj_cavity) implemented within the GROMACS ( www.gromacs.org ) framework for the rapid identification and characterization of cavities detected within MD trajectories. trj_cavity is optimized for usability and computational efficiency and is applicable to the time-dependent analysis of any cavity topology, and optional specialized descriptors can be used to characterize, for example, protein channels. Its novel grid-based algorithm performs an efficient neighbor search whose calculation time is linear with system size, and a comparison of performance with other widely used cavity analysis programs reveals an orders-of-magnitude improvement in the computational cost. To demonstrate its potential for revealing novel mechanistic insights, trj_cavity has been used to analyze long-time scale simulation trajectories for three diverse protein cavity systems. This has helped to reveal, respectively, the lipid binding mechanism in the deep hydrophobic cavity of a soluble mite-allergen protein, Der p 2; a means for shuttling carbohydrates between the surface-exposed substrate-binding and catalytic pockets of a multidomain, membrane-proximal pullulanase, PulA; and the structural basis for selectivity in the transmembrane pore of a voltage-gated sodium channel (NavMs), embedded within a lipid bilayer environment. trj_cavity is available for download under an open-source license ( http://sourceforge.net/projects/trjcavity ). A simplified, GROMACS-independent version may also be compiled. PMID:26580540

  14. Optimal space trajectories

    NASA Astrophysics Data System (ADS)

    Marec, J. P.

    Techniques for the optimization (in terms of minimal mass loss) of spacecraft trajectories are developed. The optimal transfer is defined; a model of the propulsion system is presented; the two-impulse Hohmann transfer between coplanar circular orbits is shown to be the optimal trajectory for that case; and the problems of optimal transfer in general, uniform, and central gravitational fields are analyzed. A number of specific cases are examined and illustrated with diagrams and graphs.

  15. Automated Cooperative Trajectories

    NASA Technical Reports Server (NTRS)

    Hanson, Curt; Pahle, Joseph; Brown, Nelson

    2015-01-01

    This presentation is an overview of the Automated Cooperative Trajectories project. An introduction to the phenomena of wake vortices is given, along with a summary of past research into the possibility of extracting energy from the wake by flying close parallel trajectories. Challenges and barriers to adoption of civilian automatic wake surfing technology are identified. A hardware-in-the-loop simulation is described that will support future research. Finally, a roadmap for future research and technology transition is proposed.

  16. [The health-disease-care process from the perspective of the users of a primary care clinic in Montevideo, Uruguay: An analysis of therapeutic trajectories].

    PubMed

    Evia Bertullo, Victoria

    2015-12-01

    The aim of this paper is to analyze, using an ethnographic approach, the health-disease-care experiences of the users of a multi-specialty clinic that forms part of the Metropolitan Primary Health Care Network of Uruguay's Public Health Services. The fieldwork was carried out in the northeast of Montevideo from July 2012 to November 2013, combining participant observation in social and care spaces and interviews with more than 20 users. In our analysis of care trajectories we found that people incorporate different practices and beliefs when facing their health problems. The use of biomedical health care services is predominant in Uruguay; nevertheless, people engage in self-care practices and in some cases, in the use of folk, religious/magical or alternative remedies. Medical pluralism is therefore observed in facing certain common ailments or significant experiences of disease.

  17. Hybrid MC/MD Method For High Entropy Alloy

    NASA Astrophysics Data System (ADS)

    Feng, Bojun; Widom, Michael

    High entropy alloys (HEA) are materials that contain multiple components of elements consisting of a single solid solution phase which could make the entropy of mixing very high. From recent investigations, HEA's possess promising properties such as strength at high temperature, tensile strength, thermal stability and corrosion resistance. In this talk, a hybrid Molecular Dynamics (MD)/Monte Carlo (MC) simulation method is introduced to the computational analysis of HEA, treating atomic displacement by MD as well as swapping atomic species by MC. This method efficiently models the phase separation and short range order by swapping between different types of atoms, while structural deviation from the perfect lattice sites of atoms is equilibrated quickly by MD. We apply this method to HfNbTaZr HEA modeled using an embedded-atom potential. The result gives a strong phase separation of Hf-Zr and Nb-Ta pairs shown by the pair correlation function. Diffuse scattering patterns are predicted and compared to experiments. Doe Grant No. DE-SC0014506.

  18. Hierarchical Control and Trajectory Planning

    NASA Technical Reports Server (NTRS)

    Martin, Clyde F.; Horn, P. W.

    1994-01-01

    Most of the time on this project was spent on the trajectory planning problem. The construction is equivalent to the classical spline construction in the case that the system matrix is nilpotent. If the dimension of the system is n then the spline of degree 2n-1 is constructed. This gives a new approach to the construction of splines that is more efficient than the usual construction and at the same time allows the construction of a much larger class of splines. All known classes of splines are reconstructed using the approach of linear control theory. As a numerical analysis tool control theory gives a very good tool for constructing splines. However, for the purposes of trajectory planning it is quite another story. Enclosed in this document are four reports done under this grant.

  19. Techniques for shuttle trajectory optimization

    NASA Technical Reports Server (NTRS)

    Edge, E. R.; Shieh, C. J.; Powers, W. F.

    1973-01-01

    The application of recently developed function-space Davidon-type techniques to the shuttle ascent trajectory optimization problem is discussed along with an investigation of the recently developed PRAXIS algorithm for parameter optimization. At the outset of this analysis, the major deficiency of the function-space algorithms was their potential storage problems. Since most previous analyses of the methods were with relatively low-dimension problems, no storage problems were encountered. However, in shuttle trajectory optimization, storage is a problem, and this problem was handled efficiently. Topics discussed include: the shuttle ascent model and the development of the particular optimization equations; the function-space algorithms; the operation of the algorithm and typical simulations; variable final-time problem considerations; and a modification of Powell's algorithm.

  20. 78 FR 2707 - Maryland Disaster # MD-00026

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-01-14

    ... From the Federal Register Online via the Government Publishing Office SMALL BUSINESS ADMINISTRATION Maryland Disaster MD-00026 AGENCY: U.S. Small Business Administration. ACTION: Notice. SUMMARY... Deadline Date: 10/02/2013. ADDRESSES: Submit completed loan applications to: U.S. Small...

  1. Howard Parnes, MD | Division of Cancer Prevention

    Cancer.gov

    Dr. Howard Parnes received a BA from Cornell University in 1977 and an MD from the University of Medicine and Dentistry of New Jersey in 1981. He trained in internal medicine at the Johns Hopkins Bayview Medical Center from 1981 to 1984 followed by a medical oncology fellowship at the University of Maryland Cancer Center (UMCC) from 1984 to 1987. |

  2. 76 FR 64421 - Maryland Disaster #MD-00018

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-10-18

    ... ADMINISTRATION Maryland Disaster MD-00018 AGENCY: U.S. Small Business Administration. ACTION: Notice. SUMMARY: This is a Notice of the Presidential declaration of a major disaster for Public Assistance Only for the... Disaster Assistance, U.S. Small Business Administration, 409 3rd Street, SW., Suite 6050, Washington,...

  3. 75 FR 79063 - Maryland Disaster #MD-00014

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-12-17

    ... ADMINISTRATION Maryland Disaster MD-00014 AGENCY: U.S. Small Business Administration. ACTION: Notice. SUMMARY: This is a notice of an Administrative declaration of a disaster for the State of Maryland dated 12/09... CONTACT: A. Escobar, Office of Disaster Assistance, U.S. Small Business Administration, 409 3rd Street,...

  4. 75 FR 27010 - Maryland Disaster #MD-00012

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-13

    ... ADMINISTRATION Maryland Disaster MD-00012 AGENCY: Small Business Administration. ACTION: Notice. SUMMARY: This is a Notice of the Presidential declaration of a major disaster for Public Assistance Only for the... Disaster Assistance, U.S. Small Business Administration, 409 3rd Street, SW., Suite 6050, Washington,...

  5. 76 FR 77579 - Maryland Disaster #MD-00017

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-12-13

    ... ADMINISTRATION Maryland Disaster MD-00017 AGENCY: U.S. Small Business Administration. ACTION: Notice. SUMMARY: This is a notice of an Administrative declaration of a disaster for the State of Maryland, dated 12/07... INFORMATION CONTACT: A. Escobar, Office of Disaster Assistance, U.S. Small Business Administration, 409...

  6. The Multidimensional Curriculum Model (MdCM)

    ERIC Educational Resources Information Center

    Vidergor, Hava E.

    2010-01-01

    The multidimensional Curriculum Model (MdCM) helps teachers to better prepare gifted and able students for our changing world, acquiring much needed skills. It is influenced by general learning theory of constructivism, notions of preparing students for 21st century, Teaching the Future Model, and current comprehensive curriculum models for…

  7. 77 FR 76586 - Maryland Disaster #MD-00024

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-12-28

    ... ADMINISTRATION Maryland Disaster MD-00024 AGENCY: U.S. Small Business Administration. ACTION: Notice. SUMMARY: This is a Notice of the Presidential declaration of a major disaster for the State of Maryland (FEMA... Economic Injury Loans): Somerset. ] Contiguous Counties (Economic Injury Loans Only): Maryland:...

  8. 75 FR 9005 - Maryland Disaster #MD-00011

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-02-26

    ... From the Federal Register Online via the Government Publishing Office SMALL BUSINESS ADMINISTRATION Maryland Disaster MD-00011 AGENCY: U.S. Small Business Administration. ACTION: Notice. SUMMARY... the State of Maryland (FEMA- 1875-DR), dated 02/19/2010. Incident: Severe Winter Storm and...

  9. 76 FR 59478 - Maryland Disaster #MD-00016

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-09-26

    ... From the Federal Register Online via the Government Publishing Office SMALL BUSINESS ADMINISTRATION Maryland Disaster MD-00016 AGENCY: U.S. Small Business Administration. ACTION: Notice. SUMMARY... State of Maryland (FEMA- 4034-DR), dated 09/16/2011. Incident: Hurricane Irene. Incident Period:...

  10. 77 FR 48197 - Maryland Disaster #MD-00021

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-08-13

    ... From the Federal Register Online via the Government Publishing Office SMALL BUSINESS ADMINISTRATION Maryland Disaster MD-00021 AGENCY: U.S. Small Business Administration. ACTION: Notice. SUMMARY... State of Maryland (FEMA- 4075-DR), dated 08/02/2012. Incident: Severe storms and straight-line...

  11. Comparison of transport pathways and potential sources of PM10 in two cities around a large Chinese lake using the modified trajectory analysis

    NASA Astrophysics Data System (ADS)

    Kong, Xiangzhen; He, Wei; Qin, Ning; He, Qishuang; Yang, Bin; Ouyang, Huiling; Wang, Qingmei; Xu, Fuliu

    2013-03-01

    Trajectory cluster analysis, including the two-stage cluster method based on Euclidean metrics and the one-stage clustering method based on Mahalanobis metrics and self-organizing maps (SOM), was applied and compared to identify the transport pathways of PM10 for the cities of Chaohu and Hefei, both located near Lake Chaohu in China. The two-stage cluster method was modified to further investigate the long trajectories in the second stage in order to eliminate the observed disaggregation among them. Twelve trajectory clusters were identified for both cities. The one-stage clustering method based on Mahalanobis metrics gives the best performance regarding the variances within clusters. The results showed that local PM10 emission was one of the most important sources in both cities and that the local emission in Hefei was higher than in Chaohu. In addition, Chaohu suffered greater effects from the eastern region (Yangtze River Delta, YRD) than Hefei. On the other hand, the long-range transportation from the northwestern pathway had a higher influence on the PM10 level in Hefei. Receptor models, including potential source contribution function (PSCF) and residence time weighted concentrations (RTWC), were utilized to identify the potential source locations of PM10 for both cities. However, the combined PSCF and RTWC results for the two cities provided PM10 source locations that were more consistent with the results of transport pathways and the total anthropogenic PM10 emission inventory. This indicates that the combined method's ability to identify the source regions is superior to that of the individual PSCF or RTWC methods. Henan and Shanxi Provinces and the YRD were important PM10 source regions for the two cities, but the Henan and Shanxi area was more important for Hefei than for Chaohu, while the YRD region was less important. In addition, the PSCF, RTWC and the combined results all had higher correlation coefficients with PM10 emission from traffic than from

  12. MD-11 PCA - Research flight team photo

    NASA Technical Reports Server (NTRS)

    1995-01-01

    On Aug. 30, 1995, a the McDonnell Douglas MD-11 transport aircraft landed equipped with a computer-assisted engine control system that has the potential to increase flight safety. In landings at NASA Dryden Flight Research Center, Edwards, California, on August 29 and 30, the aircraft demonstrated software used in the aircraft's flight control computer that essentially landed the MD-11 without a need for the pilot to manipulate the flight controls significantly. In partnership with McDonnell Douglas Aerospace (MDA), with Pratt & Whitney and Honeywell helping to design the software, NASA developed this propulsion-controlled aircraft (PCA) system following a series of incidents in which hydraulic failures resulted in the loss of flight controls. This new system enables a pilot to operate and land the aircraft safely when its normal, hydraulically-activated control surfaces are disabled. This August 29, 1995, photo shows the MD-11 team. Back row, left to right: Tim Dingen, MDA pilot; John Miller, MD-11 Chief pilot (MDA); Wayne Anselmo, MD-11 Flight Test Engineer (MDA); Gordon Fullerton, PCA Project pilot; Bill Burcham, PCA Chief Engineer; Rudey Duran, PCA Controls Engineer (MDA); John Feather, PCA Controls Engineer (MDA); Daryl Townsend, Crew Chief; Henry Hernandez, aircraft mechanic; Bob Baron, PCA Project Manager; Don Hermann, aircraft mechanic; Jerry Cousins, aircraft mechanic; Eric Petersen, PCA Manager (Honeywell); Trindel Maine, PCA Data Engineer; Jeff Kahler, PCA Software Engineer (Honeywell); Steve Goldthorpe, PCA Controls Engineer (MDA). Front row, left to right: Teresa Hass, Senior Project Management Analyst; Hollie Allingham (Aguilera), Senior Project Management Analyst; Taher Zeglum, PCA Data Engineer (MDA); Drew Pappas, PCA Project Manager (MDA); John Burken, PCA Control Engineer.

  13. Hybrid 3-D rocket trajectory program. Part 1: Formulation and analysis. Part 2: Computer programming and user's instruction. [computerized simulation using three dimensional motion analysis

    NASA Technical Reports Server (NTRS)

    Huang, L. C. P.; Cook, R. A.

    1973-01-01

    Models utilizing various sub-sets of the six degrees of freedom are used in trajectory simulation. A 3-D model with only linear degrees of freedom is especially attractive, since the coefficients for the angular degrees of freedom are the most difficult to determine and the angular equations are the most time consuming for the computer to evaluate. A computer program is developed that uses three separate subsections to predict trajectories. A launch rail subsection is used until the rocket has left its launcher. The program then switches to a special 3-D section which computes motions in two linear and one angular degrees of freedom. When the rocket trims out, the program switches to the standard, three linear degrees of freedom model.

  14. Direct optimization method for reentry trajectory design

    NASA Astrophysics Data System (ADS)

    Jallade, S.; Huber, P.; Potti, J.; Dutruel-Lecohier, G.

    The software package called `Reentry and Atmospheric Transfer Trajectory' (RATT) was developed under ESA contract for the design of atmospheric trajectories. It includes four software TOP (Trajectory OPtimization) programs, which optimize reentry and aeroassisted transfer trajectories. 6FD and 3FD (6 and 3 degrees of freedom Flight Dynamic) are devoted to the simulation of the trajectory. SCA (Sensitivity and Covariance Analysis) performs covariance analysis on a given trajectory with respect to different uncertainties and error sources. TOP provides the optimum guidance law of a three degree of freedom reentry of aeroassisted transfer (AAOT) trajectories. Deorbit and reorbit impulses (if necessary) can be taken into account in the optimization. A wide choice of cost function is available to the user such as the integrated heat flux, or the sum of the velocity impulses, or a linear combination of both of them for trajectory and vehicle design. The crossrange and the downrange can be maximized during reentry trajectory. Path constraints are available on the load factor, the heat flux and the dynamic pressure. Results on these proposed options are presented. TOPPHY is the part of the TOP software corresponding to the definition and the computation of the optimization problemphysics. TOPPHY can interface with several optimizes with dynamic solvers: TOPOP and TROPIC using direct collocation methods and PROMIS using direct multiple shooting method. TOPOP was developed in the frame of this contract, it uses Hermite polynomials for the collocation method and the NPSOL optimizer from the NAG library. Both TROPIC and PROMIS were developed by the DLR (Deutsche Forschungsanstalt fuer Luft und Raumfahrt) and use the SLSQP optimizer. For the dynamic equation resolution, TROPIC uses a collocation method with Splines and PROMIS uses a multiple shooting method with finite differences. The three different optimizers including dynamics were tested on the reentry trajectory of the

  15. Comparative analysis of land use/cover change trajectories and their driving forces in two small watersheds in the western Loess Plateau of China

    NASA Astrophysics Data System (ADS)

    Wang, Dongchuan; Gong, Jianhua; Chen, Liding; Zhang, Lihui; Song, Yiquan; Yue, Yujuan

    2013-04-01

    To prevent soil loss and achieve better ecological environments, soil conservation measures have been taken during the past decades in the western Loess Plateau of China. In this paper, a case study was taken in Luoyu valley and Lver valley, two sub-watersheds of Xihe watershed and comparison was carried out between them. The main object of this study is to monitor land use/cover changes in the two similar small watersheds utilizing SPOT5 imageries by object-oriented human-computer interactive classification method, further develop the method of spatio-temporal analysis of land use/cover change by using pattern metrics of change trajectories and relative land use suitability index (R) in smaller watersheds, and make comparisons between the two similar small watersheds, taking water and soil conservation measures into consideration. Results show that combining GIS and RS, this method can be perfectly applied to make comparisons between different small watersheds with similar geographical backgrounds. And land use/cover spatiotemporal dynamic change characteristics can be preferably expressed by pattern metrics of change trajectories and R values based on topographical data. Different emphases have been laid according to their own geological backgrounds in the two watersheds and human activities have different effects on the landscapes of the two watersheds. The main change pattern is from slope farmland to terrace (322, the largest in Luoyu valley) or to economic fruit forest (344, the largest in Lver valley). R value of every slope grade in both of the two watersheds drops with the rising of slope degree on the whole and it shows that there is still much to do for people in the two watersheds in consideration that all the R values are still lower than 0.7.

  16. Origin of the Ion Foreshock in a Quasi-perpendicular Curved Collisionless Shock: Particles Trajectory Analysis in 2D PIC Simulations

    NASA Astrophysics Data System (ADS)

    Savoini, P.; Lembege, B.

    2015-12-01

    The ion foreshock located upstream of the Earth's shock wave is populated with ions having interacted with the shock, and then, reflected back with an high energy gain. Spacecrafts have clearly established the existence of two distinct populations in the quasi-perpendicular shock region (i.e. for 45° ≤ ΘBn ≤ 90°, where ΘBn is the angle between the shock normal and the upstream magnetic field) : (i) field-aligned ion beams or « FAB » characterized by a gyrotropic distribution, and (ii) gyro-phase bunched ions or « GPB » characterized by a NON gyrotropic distribution. One of the important unresolved problem is the exact origin of the particles contributing to these two populations. To our knowledge, it was the first time that full-particle simulations have been performed including self-consistently the shock front curvature and nonstationarity, and the time-of-flight effects. Our analysis evidences that these two backstreaming populations may be reflected by the front itself and can be differentiated both in terms of interaction time and trajectory within the shock front. In particular, simulations evidence that "GPB" population is characterized by a short interaction time (ΔTinter = 1 to 2 τci) while the "FAB" population corresponds to a much larger time range (from 1 τci to 10 τci), where tci is the upstream ion gyroperiod. Present individual ion trajectories evidence that "FAB" population shows a strong perpendicular drift at the shock front (i.e. strong dependence of the pitch angle to the perpendicular velocity) whereas the "GPB" population shows no perpendicular drift (i.e. its pitch angle is mainly driven by the parallel velocity). Such differences explain why the "FAB" population loses their gyro-phase coherency and become gyrotropic which is not the case for the "GPB". This important result was not expected and greatly simplifies the question of their origin.

  17. Trajectory tracking control for underactuated stratospheric airship

    NASA Astrophysics Data System (ADS)

    Zheng, Zewei; Huo, Wei; Wu, Zhe

    2012-10-01

    Stratospheric airship is a new kind of aerospace system which has attracted worldwide developing interests for its broad application prospects. Based on the trajectory linearization control (TLC) theory, a novel trajectory tracking control method for an underactuated stratospheric airship is presented in this paper. Firstly, the TLC theory is described sketchily, and the dynamic model of the stratospheric airship is introduced with kinematics and dynamics equations. Then, the trajectory tracking control strategy is deduced in detail. The designed control system possesses a cascaded structure which consists of desired attitude calculation, position control loop and attitude control loop. Two sub-loops are designed for the position and attitude control loops, respectively, including the kinematics control loop and dynamics control loop. Stability analysis shows that the controlled closed-loop system is exponentially stable. Finally, simulation results for the stratospheric airship to track typical trajectories are illustrated to verify effectiveness of the proposed approach.

  18. Calculation of Electron Trajectories

    1982-06-01

    EGUN, the SLAC Electron Trajectory Program, computes trajectories of charged particles in electrostatic and magnetostatic focusing systems including the effects of space charge and self-magnetic fields. Starting options include Child''s Law conditions on cathodes of various shapes, user-specified initial conditions for each ray, and a combination of Child''s Law conditions and user specifications. Either rectangular or cylindrically symmetric geometry may be used. Magnetic fields may be specified using arbitrary configuration of coils, or the outputmore » of a magnet program, such as Poisson, or by an externally calculated array of the axial fields.« less

  19. The fastest evolutionary trajectory

    PubMed Central

    Traulsen, Arne; Iwasa, Yoh; Nowak, Martin A.

    2008-01-01

    Given two mutants, A and B, separated by n mutational steps, what is the evolutionary trajectory which allows a homogeneous population of A to reach B in the shortest time? We show that the optimum evolutionary trajectory (fitness landscape) has the property that the relative fitness increase between any two consecutive steps is constant. Hence, the optimum fitness landscape between A and B is given by an exponential function. Our result is precise for small mutation rates and excluding back mutations. We discuss deviations for large mutation rates and including back mutations. For very large mutation rates, the optimum fitness landscape is flat and has a single peak at type B. PMID:17900629

  20. General order parameter based correlation analysis of protein backbone motions between experimental NMR relaxation measurements and molecular dynamics simulations.

    PubMed

    Liu, Qing; Shi, Chaowei; Yu, Lu; Zhang, Longhua; Xiong, Ying; Tian, Changlin

    2015-02-13

    Internal backbone dynamic motions are essential for different protein functions and occur on a wide range of time scales, from femtoseconds to seconds. Molecular dynamic (MD) simulations and nuclear magnetic resonance (NMR) spin relaxation measurements are valuable tools to gain access to fast (nanosecond) internal motions. However, there exist few reports on correlation analysis between MD and NMR relaxation data. Here, backbone relaxation measurements of (15)N-labeled SH3 (Src homology 3) domain proteins in aqueous buffer were used to generate general order parameters (S(2)) using a model-free approach. Simultaneously, 80 ns MD simulations of SH3 domain proteins in a defined hydrated box at neutral pH were conducted and the general order parameters (S(2)) were derived from the MD trajectory. Correlation analysis using the Gromos force field indicated that S(2) values from NMR relaxation measurements and MD simulations were significantly different. MD simulations were performed on models with different charge states for three histidine residues, and with different water models, which were SPC (simple point charge) water model and SPC/E (extended simple point charge) water model. S(2) parameters from MD simulations with charges for all three histidines and with the SPC/E water model correlated well with S(2) calculated from the experimental NMR relaxation measurements, in a site-specific manner.

  1. Gunpowder River Bridge. Harewood, Baltimore Co., MD. Sec. 1201, MP ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Gunpowder River Bridge. Harewood, Baltimore Co., MD. Sec. 1201, MP 78.86. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  2. Edgewood Interlocking Tower. Edgewood, Hareford Co., MD. Sec. 1201, MP ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Edgewood Interlocking Tower. Edgewood, Hareford Co., MD. Sec. 1201, MP 75.50. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  3. Pennsylvania Railroad: Pennsylvania Station. Baltimore, Baltimore City, MD. Sec. 1201, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Pennsylvania Railroad: Pennsylvania Station. Baltimore, Baltimore City, MD. Sec. 1201, MP 95.50. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  4. B & O Railroad: Bayview Bridge. Baltimore, Baltimore City, MD. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    B & O Railroad: Bayview Bridge. Baltimore, Baltimore City, MD. Sec. 1201, MP 92.02. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  5. Susquehanna River Bridge. Havre de Grace, Hareford Co., MD. Sec. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Susquehanna River Bridge. Havre de Grace, Hareford Co., MD. Sec. 1201, MP 60.07. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  6. Edison Highway Bridge. Baltimore, Baltimore City, MD. Sec. 1201, MP ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Edison Highway Bridge. Baltimore, Baltimore City, MD. Sec. 1201, MP 92.02. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  7. Gunpowder River Bridge drawspan. Harewood, Baltimore Co., MD. Sec. 1201, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Gunpowder River Bridge drawspan. Harewood, Baltimore Co., MD. Sec. 1201, MP 78.86. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  8. Wilkins Avenue Bridge. Violetville, Baltimore City, MD. Sec. 1201, MP ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Wilkins Avenue Bridge. Violetville, Baltimore City, MD. Sec. 1201, MP 100.59. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  9. Bush River Bridge drawspan. Bush River, Hareford Co., MD. Sec. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Bush River Bridge drawspan. Bush River, Hareford Co., MD. Sec. 1201, MP 72.14. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  10. Bush River Bridge. Bush River, Hareford Co., MD. Sec. 1201, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Bush River Bridge. Bush River, Hareford Co., MD. Sec. 1201, MP 72.14. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  11. Juniata Street Culvert. Havre de Grace, Hareford Co., MD. Sec. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Juniata Street Culvert. Havre de Grace, Hareford Co., MD. Sec. 1201, MP 60.77. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  12. LANDOVER SUBSTATION. LANDOVER, PRINCE GEORGES CO., MD Sec, 1201, MP ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    LANDOVER SUBSTATION. LANDOVER, PRINCE GEORGES CO., MD Sec, 1201, MP 129.00. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  13. BIG PATUXENT RIVER BRIDGE. ARUNDEL, ANNE ARUNDEL CO., MD. Sec. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    BIG PATUXENT RIVER BRIDGE. ARUNDEL, ANNE ARUNDEL CO., MD. Sec. 1201, MP 115.61. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  14. SEVERN RUN CULVERT. MAYFIELD, ANNE ARUNDEL CO., MD Sec. 1201, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    SEVERN RUN CULVERT. MAYFIELD, ANNE ARUNDEL CO., MD Sec. 1201, MP 112.17. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  15. Gwynns Falls Bridge. Baltimore, Baltimore City, MD. Sec. 1201, MP ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Gwynns Falls Bridge. Baltimore, Baltimore City, MD. Sec. 1201, MP 99.20. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  16. B & P Tunnel west portal. Baltimore, Baltimore City, MD. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    B & P Tunnel west portal. Baltimore, Baltimore City, MD. Sec. 1201, MP 97.43. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  17. CHESTNUT AVENUE BRIDGE. BOWIE, PRINCE GEORGES CO., MD. Sec. 1201,, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    CHESTNUT AVENUE BRIDGE. BOWIE, PRINCE GEORGES CO., MD. Sec. 1201,, MP 120.48. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  18. Boothby Hill Road Bridge. Aberdeen, Hareford Co., MD. Sec. 1201, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Boothby Hill Road Bridge. Aberdeen, Hareford Co., MD. Sec. 1201, MP 66.88. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  19. Loudon Park Substation. Violetville, Baltimore City, MD. Sec. 1201, MP ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Loudon Park Substation. Violetville, Baltimore City, MD. Sec. 1201, MP 100.50. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  20. Union Junction Interlocking Tower. Baltimore, Baltimore City, MD. Sec. 1201, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Union Junction Interlocking Tower. Baltimore, Baltimore City, MD. Sec. 1201, MP 95.49. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  1. North Avenue Bridge. Baltimore, Baltimore City, MD. Sec. 1201, MP ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    North Avenue Bridge. Baltimore, Baltimore City, MD. Sec. 1201, MP 96.00. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  2. BOWIE SUBSTATION. BOWIE, PRINCE GEORGES CO., MD Sec. 1201, MP ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    BOWIE SUBSTATION. BOWIE, PRINCE GEORGES CO., MD Sec. 1201, MP 129.55. - Northeast Railroad Corridor, Amtrak route between District of Columbia/Maryland state line & Maryland/Delaware state line, Baltimore, Independent City, MD

  3. Three-phase permeabilities and other characteristics of 260-mD fired Berea

    SciTech Connect

    Maloney, D.; Brinkmeyer, A.

    1992-04-01

    A laboratory investigation was conducted to determine relative permeabilities and other characteristics of a 260-mD fired Berea sandstone. The mineralogical and physical characteristics of the sample were characterized by XRD tests, thin section analyses, mercury injection tests, and centrifuge capillary pressure and wettability tests. Two-phase oil/water relative permeabilities were measured under several stress conditions. Resistivity characteristics of the sample were also evaluated during several of the oil/water tests. Oil/gas and gas/water relative permeabilities were measured during steady-state tests. Three-phase steady-state oil/gas/water tests were performed for six DDI saturation trajectories (decreasing brine and oil saturations, increasing gas saturation) in which the sample was not cleaned between saturation trajectories.

  4. A study of QM/Langevin-MD simulation for oxygen-evolving center of photosystem II

    SciTech Connect

    Uchida, Waka; Kimura, Yoshiro; Wakabayashi, Masamitsu; Hatakeyama, Makoto; Ogata, Koji; Nakamura, Shinichiro; Yokojima, Satoshi

    2013-12-10

    We have performed three QM/Langevin-MD simulations for oxygen-evolving complex (OEC) and surrounding residues, which are different configurations of the oxidation numbers on Mn atoms in the Mn{sub 4}O{sub 5}Ca cluster. By analyzing these trajectories, we have observed sensitivity of the change to the configuration of Mn oxidation state on O atoms of carboxyl on three amino acids, Glu354, Ala344, and Glu333. The distances from Mn to O atoms in residues contacting with the Mn{sub 4}O{sub 5}Ca cluster were analyzed for the three trajectories. We found the good correlation of the distances among the simulations. However, the distances with Glu354, Ala344, and Glu333 have not shown the correlation. These residues can be sensitive index of the changes of Mn oxidation numbers.

  5. Graphs for Isotopes of 101-Md (Mendelevium)

    NASA Astrophysics Data System (ADS)

    Sukhoruchkin, S. I.; Soroko, Z. N.

    This document is part of the Supplement containing the complete sets of data of Subvolume B `Nuclei with Z = 55 - 100' of Volume 22 `Nuclear Binding Energies and Atomic Masses' of Landolt-Börnstein - Group I `Elementary Particles, Nuclei and Atoms', and additionally including data for nuclei with Z = 101 - 130. It provides a graphic representation of nucleon separation energies and residual interaction parameters for isotopes of the chemical element 101-Md (Mendelevium, atomic number Z = 101).

  6. Toxic wastes discovered in Cecil County, MD

    SciTech Connect

    Not Available

    1994-01-01

    This report focuses on the clean-up activities following toxic waste contamination in Cecil County, MD. The potentially hazardous leakage from waste containers buried in a quarry was addressed before it was turned into a civil emergency of the magnitude of Love Canal. US Superfund is a federal government trust fund largely comprised of taxes on the chemical and petrochemical industries. Local governments share in the cost of removing the waste and other aspects of emergency management.

  7. Toxic wastes discovered in Cecil County, MD

    SciTech Connect

    1994-12-31

    This report focuses on the clean-up activities following toxic waste contamination in Cecil County, MD. The potentially hazardous leakage from waste containers buried in a quarry was addressed before it was turned into a civil emergency of the magnitude of Love Canal. US Superfund is a federal government trust fund largely comprised of taxes on the chemical and petrochemical industries. Local governments share in the cost of removing the waste and other aspects of emergency management.

  8. Eva Szabo, MD | Division of Cancer Prevention

    Cancer.gov

    Dr. Eva Szabo is Chief of the Lung and Upper Aerodigestive Cancer Research Group at the NCI Division of Cancer Prevention. She graduated from Yale University with a BS in Molecular Biophysics and Biochemistry, received her MD from Duke University, and completed her internal medicine residency at Bellevue-NYU Medical Center. After completing her medical oncology fellowship at the National Cancer Institute, Dr. Szabo led a laboratory effort studying lung cancer biology. |

  9. A Comparison of Methods to Measure the Magnetic Moment of Magnetotactic Bacteria through Analysis of Their Trajectories in External Magnetic Fields

    PubMed Central

    Fradin, Cécile

    2013-01-01

    Magnetotactic bacteria possess organelles called magnetosomes that confer a magnetic moment on the cells, resulting in their partial alignment with external magnetic fields. Here we show that analysis of the trajectories of cells exposed to an external magnetic field can be used to measure the average magnetic dipole moment of a cell population in at least five different ways. We apply this analysis to movies of Magnetospirillum magneticum AMB-1 cells, and compare the values of the magnetic moment obtained in this way to that obtained by direct measurements of magnetosome dimension from electron micrographs. We find that methods relying on the viscous relaxation of the cell orientation give results comparable to that obtained by magnetosome measurements, whereas methods relying on statistical mechanics assumptions give systematically lower values of the magnetic moment. Since the observed distribution of magnetic moments in the population is not sufficient to explain this discrepancy, our results suggest that non-thermal random noise is present in the system, implying that a magnetotactic bacterial population should not be considered as similar to a paramagnetic material. PMID:24349185

  10. Self-Esteem Trajectories among Ethnic Minority Adolescents: A Growth Curve Analysis of the Patterns and Predictors of Change

    ERIC Educational Resources Information Center

    Greene, Melissa L.; Way, Niobe

    2005-01-01

    The current study presents a growth curve analysis of self-esteem among Black, Latino, and Asian American high school students. A series of hierarchical linear models were used to examine patterns and predictors of change in self-esteem over time. Results revealed an average increase in self-esteem with age. Although boys and girls experienced…

  11. Comparison of ER-2 Aircraft and POAM-III, MLS, and SAGE-II Satellite Measurements During SOLVE Using Traditional Correlative Analysis and Trajectory Hunting Technique

    NASA Technical Reports Server (NTRS)

    Danilin, M. Y.; Ko, Malcolm K. W.; Bevilacqua, R. M.; Lyjak, L. V.; Froidevaux, L.; Santee, M. L.; Zawodny, J. M.; Hoppel, K. W.; Richard, E. C.; Spackman, J. R.; Jackman, Charles H. (Technical Monitor)

    2001-01-01

    We compared the version 5 Microwave Limb Sounder (MLS) aboard the Upper Atmosphere Research Satellite (UARS), version 3 Polar Ozone and Aerosol Measurement-III (POAM-111) aboard the French satellite SPOT-IV, version 6.0 Stratospheric Aerosol and Gas Experiment 11 (SAGE-II) aboard the Earth Radiation Budget Satellite, and NASA ER-2 aircraft measurements made in the northern hemisphere in January-February 2000 during the SAGE III Ozone Loss and Validation Experiment (SOLVE). This study addresses one of the key scientific objectives of the SOLVE campaign, namely, to validate multi-platform satellite measurements made in the polar stratosphere during winter. This intercomparison was performed using a traditional correlative analysis (TCA) and a trajectory hunting technique (THT). Launching backward and forward trajectories from the points of measurement, the THT identifies air parcels sampled at least twice within a prescribed match criterion during the course of 5 days. We found that the ozone measurements made by these four instruments agree most of the time within 110% in the stratosphere up to 1400 K (approximately 35 km). The water vapor measurements from POAM-III and the ER-2 Harvard Lyman-alpha hygrometer and JPL laser hygrometer agree to within 10.5 ppmv (or about +/-10%) in the lower stratosphere above 380 K. The MLS and ER-2 ClO measurements agree within their error bars for the TCA. The MLS and ER-2 nitric acid measurements near 17-20 km altitude agree within their uncertainties most of the time with a hint of a positive offset by MLS according to the TCA. We also applied the AER box model constrained by the ER-2 measurements for analysis of the ClO and HN03 measurements using the THT. We found that: (1) the model values of ClO are smaller by about 0.3-0.4 (0.2) ppbv below (above) 400 K than those by MLS and (2) the HN03 comparison shows a positive offset of MLS values by approximately 1 and 1-2 ppbv below 400 K and near 450 K, respectively. It is hard to

  12. Patched Conic Trajectory Code

    NASA Technical Reports Server (NTRS)

    Park, Brooke Anderson; Wright, Henry

    2012-01-01

    PatCon code was developed to help mission designers run trade studies on launch and arrival times for any given planet. Initially developed in Fortran, the required inputs included launch date, arrival date, and other orbital parameters of the launch planet and arrival planets at the given dates. These parameters include the position of the planets, the eccentricity, semi-major axes, argument of periapsis, ascending node, and inclination of the planets. With these inputs, a patched conic approximation is used to determine the trajectory. The patched conic approximation divides the planetary mission into three parts: (1) the departure phase, in which the two relevant bodies are Earth and the spacecraft, and where the trajectory is a departure hyperbola with Earth at the focus; (2) the cruise phase, in which the two bodies are the Sun and the spacecraft, and where the trajectory is a transfer ellipse with the Sun at the focus; and (3) the arrival phase, in which the two bodies are the target planet and the spacecraft, where the trajectory is an arrival hyperbola with the planet as the focus.

  13. Trajectory structures and transport

    SciTech Connect

    Vlad, Madalina; Spineanu, Florin

    2004-11-01

    The special problem of transport in two-dimensional divergence-free stochastic velocity fields is studied by developing a statistical approach, the nested subensemble method. The nonlinear process of trapping determined by such fields generates trajectory structures whose statistical characteristics are determined. These structures strongly influence the transport.

  14. Remains of abutments for Bridge No. 1575 at MD Rt. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Remains of abutments for Bridge No. 1575 at MD Rt. 51 in Spring Gap, Maryland, looking northeast. (Compare with HAER MD-115 photos taken 1988). - Western Maryland Railway, Cumberland Extension, Pearre to North Branch, from WM milepost 125 to 160, Pearre, Washington County, MD

  15. Optimizing interplanetary trajectories with deep space maneuvers

    NASA Astrophysics Data System (ADS)

    Navagh, John

    1993-09-01

    Analysis of interplanetary trajectories is a crucial area for both manned and unmanned missions of the Space Exploration Initiative. A deep space maneuver (DSM) can improve a trajectory in much the same way as a planetary swingby. However, instead of using a gravitational field to alter the trajectory, the on-board propulsion system of the spacecraft is used when the vehicle is not near a planet. The purpose is to develop an algorithm to determine where and when to use deep space maneuvers to reduce the cost of a trajectory. The approach taken to solve this problem uses primer vector theory in combination with a non-linear optimizing program to minimize Delta(V). A set of necessary conditions on the primer vector is shown to indicate whether a deep space maneuver will be beneficial. Deep space maneuvers are applied to a round trip mission to Mars to determine their effect on the launch opportunities. Other studies which were performed include cycler trajectories and Mars mission abort scenarios. It was found that the software developed was able to locate quickly DSM's which lower the total Delta(V) on these trajectories.

  16. Discovery of /sup 260/Md and the decay properties of /sup 258/Fm, /sup 258m,g/Md, and /sup 259/Md

    SciTech Connect

    Lougheed, R.W.; Hulet, E.K.; Dougan, R.J.; Wild, J.F.; Dupzyk, R.J.; Henderson, C.M.; Moody, K.J.; Hahn, R.L.; Suemmerer, K.; Bethune, G.

    1985-08-01

    We have discovered a new neutron-rich isotope, /sup 260/Md, from /sup 18/O and /sup 22/Ne bombardments of /sup 254/Es. We observed a spontaneous-fission (SF) activity with a 32-day half-life in electromagnetically separated mass-260 fractions from these bombardments and we have measured the mass and kinetic energy distributions of this SF activity. The mass distribution was symmetric with the principal energy peak at 234-MeV total kinetic energy (TKE), similar to previous observations for heavy Fm isotopes. Surprisingly, we also observed a smaller symmetric component with 195-MeV TKE. We interpret these two peaks in the TKE distribution as arising from two types of fission in the same nucleus, or bimodal fission. The observed fission activity may be either from the SF decay of /sup 260/Md or /sup 260/Fm which would arise from electron capture (EC) decay of /sup 260/Md. We have eliminated the possible ..beta../sup -/ decay of /sup 260/Md by measuring ..beta../sup -/-SF time correlations for the decay of /sup 260/Md and we plan to determine if /sup 260/Md decays by EC by measuring time correlations between Fm x-rays and SF events. We also measured properties for heavy Fm and Md isotopes which include: (1) more accurate cross sections for the neutron-rich Md isotopes which we use to predict the production rates of yet undiscovered nuclides; (2) improved half-live measurements for /sup 258m,g/Md and /sup 259/Md; (3) confirmation of the EC decay of /sup 258m/Md by measuring Fm x-rays preceding the SF decay of /sup 258/Fm; and (4) very substantially improved mass and TKE distributions for the SF decay of /sup 258/Fm and /sup 259/Md.

  17. IRVE-II Post-Flight Trajectory Reconstruction

    NASA Technical Reports Server (NTRS)

    O'Keefe, Stephen A.; Bose, David M.

    2010-01-01

    NASA s Inflatable Re-entry Vehicle Experiment (IRVE) II successfully demonstrated an inflatable aerodynamic decelerator after being launched aboard a sounding rocket from Wallops Flight Facility (WFF). Preliminary day of flight data compared well with pre-flight Monte Carlo analysis, and a more complete trajectory reconstruction performed with an Extended Kalman Filter (EKF) approach followed. The reconstructed trajectory and comparisons to an attitude solution provided by NASA Sounding Rocket Operations Contract (NSROC) personnel at WFF are presented. Additional comparisons are made between the reconstructed trajectory and pre and post-flight Monte Carlo trajectory predictions. Alternative observations of the trajectory are summarized which leverage flight accelerometer measurements, the pre-flight aerodynamic database, and on-board flight video. Finally, analysis of the payload separation and aeroshell deployment events are presented. The flight trajectory is reconstructed to fidelity sufficient to assess overall project objectives related to flight dynamics and overall, IRVE-II flight dynamics are in line with expectations

  18. Huygens probe entry, descent, and landing trajectory reconstruction using the Program to Optimize Simulated Trajectories II

    NASA Astrophysics Data System (ADS)

    Striepe, Scott Allen

    The objectives of this research were to develop a reconstruction capability using the Program to Optimize Simulated Trajectories II (POST2), apply this capability to reconstruct the Huygens Titan probe entry, descent, and landing (EDL) trajectory, evaluate the newly developed POST2 reconstruction module, analyze the reconstructed trajectory, and assess the pre-flight simulation models used for Huygens EDL simulation. An extended Kalman filter (EKF) module was developed and integrated into POST2 to enable trajectory reconstruction (especially when using POST2-based mission specific simulations). Several validation cases, ranging from a single, constant parameter estimate to multivariable estimation cases similar to an actual mission flight, were executed to test the POST2 reconstruction module. Trajectory reconstruction of the Huygens entry probe at Titan was accomplished using accelerometer measurements taken during flight to adjust an estimated state (e.g., position, velocity, parachute drag, wind velocity, etc.) in a POST2-based simulation developed to support EDL analyses and design prior to entry. Although the main emphasis of the trajectory reconstruction was to evaluate models used in the NASA pre-entry trajectory simulation, the resulting reconstructed trajectory was also assessed to provide an independent evaluation of the ESA result. Major findings from this analysis include: Altitude profiles from this analysis agree well with other NASA and ESA results but not with Radar data, whereas a scale factor of about 0.93 would bring the radar measurements into compliance with these results; entry capsule aerodynamics predictions (axial component only) were well within 3-sigma bounds established pre-flight for most of the entry when compared to reconstructed values; Main parachute drag of 9% to 19% above ESA model was determined from the reconstructed trajectory; based on the tilt sensor and accelerometer data, the conclusion from this assessment was that the

  19. High-Spectral Resolution Lidar Observations of Aerosols Between Northern California and Hawaii: Their Optical Properties and Possible Origins Using Back Trajectory Analysis.

    NASA Astrophysics Data System (ADS)

    Morley, B.; Pierce, R. B.; Eloranta, E. W.; Spuler, S.

    2015-12-01

    The National Center for Atmospheric Research (NCAR) High Spectral Resolution Lidar (HSRL) was flown on the National Science Foundation (NSF) Gulfstream V (GV) aircraft as part of the instrumentation package for the Cloud System Evolution in the Trades (CSET) field study. Complex aerosol layers, at both low and elevated levels were observed between the west coast of California and Hawaii. The optical properties of aerosols that can be measured by the HSRL are backscatter cross-section, depolarization and extinction cross-section. The Real-time Air Quality Modeling System (RAQMS) will be used to investigate the chemical and aerosol histories of the aerosols observed by the HSRL using back-trajectory analysis. One of the science goals of CSET is to look at the same air mass on the return to California as were observed on the flight to Hawaii and this objective may allow us to look at the evolution of aerosol properties if we are successful in sampling the same aerosol features on successive flights.

  20. Dissipative Bohmian mechanics within the Caldirola–Kanai framework: A trajectory analysis of wave-packet dynamics in viscid media

    SciTech Connect

    Sanz, A.S.; Martínez-Casado, R.; Peñate-Rodríguez, H.C.; Rojas-Lorenzo, G.; Miret-Artés, S.

    2014-08-15

    Classical viscid media are quite common in our everyday life. However, we are not used to find such media in quantum mechanics, and much less to analyze their effects on the dynamics of quantum systems. In this regard, the Caldirola–Kanai time-dependent Hamiltonian constitutes an appealing model, accounting for friction without including environmental fluctuations (as it happens, for example, with quantum Brownian motion). Here, a Bohmian analysis of the associated friction dynamics is provided in order to understand how a hypothetical, purely quantum viscid medium would act on a wave packet from a (quantum) hydrodynamic viewpoint. To this purpose, a series of paradigmatic contexts have been chosen, such as the free particle, the motion under the action of a linear potential, the harmonic oscillator, or the superposition of two coherent wave packets. Apart from their analyticity, these examples illustrate interesting emerging behaviors, such as localization by “quantum freezing” or a particular type of quantum–classical correspondence. The reliability of the results analytically determined has been checked by means of numerical simulations, which has served to investigate other problems lacking of such analyticity (e.g., the coherent superpositions). - Highlights: • A dissipative Bohmian approach is developed within the Caldirola–Kanai model. • Some simple yet physically insightful systems are then studied analytically. • Dissipation leads to spatial localization in free-force regimes. • Under the action of linear forces, dissipation leads to uniform motion. • In harmonic potentials, the system decays unavoidable to the well minimum.

  1. Developmental Trajectories in Toddlers’ Self-restraint Predict Individual Differences in Executive Functions 14 Years Later: A Behavioral Genetic Analysis

    PubMed Central

    Friedman, Naomi P.; Miyake, Akira; Robinson, JoAnn L.; Hewitt, John K.

    2011-01-01

    We examined whether self-restraint in early childhood predicted individual differences in three executive functions (EFs; inhibiting prepotent responses, updating working memory, and shifting task sets) in late adolescence in a sample of ~950 twins. At ages 14, 20, 24, and 36 months, the children were shown an attractive toy and told not to touch it for 30 seconds. Latency to touch the toy increased with age, and latent class growth modeling distinguished two groups of children that differed in their latencies to touch the toy at all 4 time points. Using confirmatory factor analysis, the three EFs (measured with latent variables at age 17 years) were decomposed into a Common EF factor (isomorphic to response inhibition ability) and two factors specific to updating and shifting, respectively. Less restrained children had significantly lower scores on the Common EF factor, equivalent scores on the Updating-specific factor, and higher scores on the Shifting-specific factor than the more restrained children. The less restrained group also had lower IQ scores, but this effect was entirely mediated by the EF components. Twin models indicated that the associations were primarily genetic in origin for the Common EF variable but split between genetics and nonshared environment for the Shifting-specific variable. These results suggest a biological relation between individual differences in self-restraint and EFs, one that begins early in life and persists into late adolescence. PMID:21668099

  2. Maturation Along White Matter Tracts in Human Brain Using a Diffusion Tensor Surface Model Tract-Specific Analysis

    PubMed Central

    Chen, Zhang; Zhang, Hui; Yushkevich, Paul A.; Liu, Min; Beaulieu, Christian

    2016-01-01

    Previous diffusion tensor imaging tractography studies have demonstrated exponential patterns of developmental changes for diffusion parameters such as fractional anisotropy (FA) and mean diffusivity (MD) averaged over all voxels in major white matter (WM) tracts of the human brain. However, this assumes that the entire tract is changing in unison, which may not be the case. In this study, a surface model based tract-specific analysis was applied to a cross-sectional cohort of 178 healthy subjects (83 males/95 females) aged from 6 to 30 years to spatially characterize the age-related changes of FA and MD along the trajectory of seven major WM tracts – corpus callosum (CC) and six bilateral tracts. There were unique patterns of regions that showed different exponential and linear rates of increasing FA or decreasing MD and age at which FA or MD levels off along each tract. Faster change rate of FA was observed in genu of CC and frontal-parietal part of superior longitudinal fasciculus (SLF). Inferior corticospinal tract (CST), posterior regions of association tracts such as inferior longitudinal fasciculus, inferior frontal occipital fasciculus and uncinate fasciculus also displayed earlier changing patterns for FA. MD decreases with age also exhibited this posterior-to-anterior WM maturation pattern for most tracts in females. Both males and females displayed similar FA/MD patterns of change with age along most large tracts; however, males had overall reached the FA maxima or MD minima later compared with females in most tracts with the greater differences occurring in the CST and frontal-parietal part of SLF for MD. Therefore, brain WM development has spatially varying trajectories along tracts that depend on sex and the tract. PMID:26909027

  3. Trajectory shaping rendezvous guidance

    NASA Astrophysics Data System (ADS)

    Klumpp, A. R.

    The Space Station will bring a great increase in rendezvous traffic. Formerly, rendezvous has been expensive in terms of time and crew involvement. Multiple trajectory adjustments on separate orbits have been required to meet safety, lighting, and geometry requirements. This paper describes a new guidance technique in which the approach trajectory is shaped by a sequence of velocity increments in order to satisfy multiple constraints within a single orbit. The approach phase is planned before the mission, leaving a group of free parameters that are optimized by onboard guidance. Fuel penalties are typically a few percent, compared to unshaped Hohmann transfers, and total fuel costs can be less than those of more time-consuming ways of meeting the same requirements.

  4. Scout trajectory error propagation computer program

    NASA Technical Reports Server (NTRS)

    Myler, T. R.

    1982-01-01

    Since 1969, flight experience has been used as the basis for predicting Scout orbital accuracy. The data used for calculating the accuracy consists of errors in the trajectory parameters (altitude, velocity, etc.) at stage burnout as observed on Scout flights. Approximately 50 sets of errors are used in Monte Carlo analysis to generate error statistics in the trajectory parameters. A covariance matrix is formed which may be propagated in time. The mechanization of this process resulted in computer program Scout Trajectory Error Propagation (STEP) and is described herein. Computer program STEP may be used in conjunction with the Statistical Orbital Analysis Routine to generate accuracy in the orbit parameters (apogee, perigee, inclination, etc.) based upon flight experience.

  5. Gordon Fullerton in PCA (MD-11) Simulator

    NASA Technical Reports Server (NTRS)

    1998-01-01

    NASA research pilot Gordon Fullerton 'flying' in the MD-11 simulator during the Propulsion Controlled Aircraft (PCA) project. This investigation grew out of the crash of a DC-10 airliner on July 19, 1989, following an explosion in the rear engine which caused the loss of all manual flight controls. The flight crew attempted to control the airliner using only the thrust from the two remaining engines. Although the DC-10 crashed during the landing attempt, 184 of the 296 passengers and crew aboard survived. The PCA effort at the Dryden Flight Research Center grew out of the crash, and attempted to develop a means to successfully land an aircraft using only engine thrust. After more than five years of work, on August 29, 1995, Gordon Fullerton made the first PCA touchdown aboard an MD-11 airliner (a later version of the DC-10). The concept was further refined over the years that followed this first landing. Simulators were essential ingredients of the PCA development process. The feasibility of the concept was first tested with an F-15 simulator, then the results of actual flight tests in an F-15 were incorporated back into the simulator. Additional simulations were run on the Boeing 720 airliner simulator used in the Controlled Impact Demonstration project. After the MD-11 test landings, Boeing 747 and 757 simulators tested a wide range of possible situations. Simulations even helped develop a method of landing an airliner if it lost its complete hydraulic system as well as a wing engine, by transferring fuel to shift the center of gravity toward the working engine. The most extreme procedure was undertaken in a 747 simulator. The aircraft simulated the loss of the hydraulic system at 35,000 feet and rolled upside down. Then, the PCA mode was engaged, the airliner righted itself, leveled its wings, and made an approach nearly identical to that of a normal auto landing.

  6. Migration and interpolation for the hand-held GPR MD sensor system (ALIS)

    NASA Astrophysics Data System (ADS)

    Feng, Xuan; Kobayashi, Takao; Takahashi, Kazunori; Fujiwara, Jun; Sato, Motoyuki

    2006-05-01

    We developed a hand-held landmine detection sensor system, ALIS (Advanced Landmine Imaging System), combined with a metal detector and GPR (Ground penetrating radar). The system has a CCD camera attached on the sensor handle and can record the MD and GPR signal with the sensor position information. Therefore, it can offer the visual MD image and GPR image, which is used to define targets. But because ALIS is a hand-held system, the sensor position is random when it is operated in the field by human being. Also GPR normally suffers from very strong clutter. To deal with these problems, the interpolation is a common choice for both MD and GPR to create grid data set firstly and migration was used to improve the quality of GPR image. But generally the interpolation can not improve the quality of data set, although it can offer grid data set for visualization. Also for 3D GPR data set, it will consume much processing time. In fact, the migration can not only improve the quality of GPR data but also interpolate data to offer grid data set. It is a kind of 2.5D interpolation and just uses related data in the diffraction trajectory surface. So it can offer directly the visual GPR image and save the processing time. We will discuss two procedures for GPR, interpolation + migration or only migration, in this paper. Lastly, we also will report some results of evaluation test in 2006 February in Croatia.

  7. Dawbeney Turbervile, MD (1612-1696).

    PubMed

    Simunovic, Matthew P

    2012-03-01

    The year 2012 marks the quatercentenary of the birth of Dawbeney Turbervile,MD(1612-1696), one-time Royalist soldier and later ophthalmologist to England’s Princess Anne, the diarist Samuel Pepys, the natural philosopher Robert Boyle, and the astronomer Walter Pope. Turbervile is remarkable for many reasons: He specialized at a time when generalization was prized; though he was a qualified physician, he also practiced the trade of surgery. Furthermore, he provided in his communications with the Royal Society early descriptions of achromatopsia, ocular foreign body removal with a magnet, and tic doloreaux. He is a forebear worth remembering

  8. Dawbeney Turbervile, MD (1612-1696).

    PubMed

    Simunovic, Matthew P

    2012-03-01

    The year 2012 marks the quatercentenary of the birth of Dawbeney Turbervile,MD(1612-1696), one-time Royalist soldier and later ophthalmologist to England’s Princess Anne, the diarist Samuel Pepys, the natural philosopher Robert Boyle, and the astronomer Walter Pope. Turbervile is remarkable for many reasons: He specialized at a time when generalization was prized; though he was a qualified physician, he also practiced the trade of surgery. Furthermore, he provided in his communications with the Royal Society early descriptions of achromatopsia, ocular foreign body removal with a magnet, and tic doloreaux. He is a forebear worth remembering PMID:22411681

  9. Combined trajectory clustering and aerosol fields analysis to evaluate the potential emission flux to aerosol pollutants in an urban and semi-urban atmospheres in eastern India

    NASA Astrophysics Data System (ADS)

    Kumar, B. D.; Verma, S.

    2015-12-01

    A hybrid source-receptor analysis was carried out to evaluate the potential emission flux to winter monsoon (WinMon) aerosols over eastern India urban (Kolkata, Kol) and semi-urban atmospheres (Kharagpur, Kgp). This was done through application of fuzzy c-mean clustering to back-trajectory data combined with emission flux and residence time weighted aerosols analysis. WinMon mean aerosol optical depth (AOD) and angstrom exponent (AE) at Kol were respectively slightly higher than and nearly equal to that at Kgp. Out of six source region clusters over Indian subcontinent and two over Indian oceanic region, the cluster mean AOD was the highest when associated with the mean path of air mass originating from the Bay of Bengal (BoB) and the Arabian sea (AS) clusters at Kol and that from the Indo-Gangetic plain (IGP)cluster at Kgp. Spatial distribution of weighted AOD fields showed the highest potential source of aerosols over the IGP, majorly over upper IGP (IGP-U), lower IGP (IGP-L) and eastern region (ER) clusters. The emission flux contribution potential (EFCP) of fossil fuel (FF) emissions at surface (SL) of Kol/Kgp , elevated layer (EL) of Kol, and of biomass burning (BB) emissions at SL of Kol were majorly from IGP-U, IGP-L and IGP-U/L clusters respectively. The EFCP of FF/BB emissions at Kgp-EL/SL, and that of BB at EL of Kol/Kgp were mainly from ER and Africa (AFR) clusters respectively. Though the AFR cluster was constituted of significantly high emission flux source potential of dust emissions, the EFCP of dust from NWI was comparable to that from AFR at Kol SL/EL.

  10. Growth Trajectories of Health Behaviors from Adolescence through Young Adulthood.

    PubMed

    Wiium, Nora; Breivik, Kyrre; Wold, Bente

    2015-11-01

    Based on nine waves of data collected during a period of 17 years (1990-2007), the present study explored different developmental trajectories of the following unhealthy behaviors: regular smoking, lack of regular exercise, lack of daily fruit intake, and drunkenness. A baseline sample of 1195 13-year-old pupils was from 22 randomly selected schools in the Hordaland County in western Norway. Latent class growth analysis revealed three developmental trajectories. The first trajectory was a conventional trajectory, comprising 36.3% of participants, who showed changes in smoking, physical exercise, fruit intake, and drunkenness consistent with the prevailing age specific norms of these behaviors in the Norwegian society at the time. The second trajectory was a passive trajectory, comprising 25.5% of participants, who reported low levels of both healthy and unhealthy behaviors during the 17-year period. The third trajectory was an unhealthy trajectory, comprising 38.2% of participants, who had high levels of unhealthy behaviors over time. Several covariates were examined, but only sex and mother's and father's educational levels were found to be significantly associated with the identified trajectories. While these findings need to be replicated in future studies, the identification of the different trajectories suggests the need to tailor intervention according to specific needs. PMID:26516889

  11. Growth Trajectories of Health Behaviors from Adolescence through Young Adulthood

    PubMed Central

    Wiium, Nora; Breivik, Kyrre; Wold, Bente

    2015-01-01

    Based on nine waves of data collected during a period of 17 years (1990–2007), the present study explored different developmental trajectories of the following unhealthy behaviors: regular smoking, lack of regular exercise, lack of daily fruit intake, and drunkenness. A baseline sample of 1195 13-year-old pupils was from 22 randomly selected schools in the Hordaland County in western Norway. Latent class growth analysis revealed three developmental trajectories. The first trajectory was a conventional trajectory, comprising 36.3% of participants, who showed changes in smoking, physical exercise, fruit intake, and drunkenness consistent with the prevailing age specific norms of these behaviors in the Norwegian society at the time. The second trajectory was a passive trajectory, comprising 25.5% of participants, who reported low levels of both healthy and unhealthy behaviors during the 17-year period. The third trajectory was an unhealthy trajectory, comprising 38.2% of participants, who had high levels of unhealthy behaviors over time. Several covariates were examined, but only sex and mother’s and father’s educational levels were found to be significantly associated with the identified trajectories. While these findings need to be replicated in future studies, the identification of the different trajectories suggests the need to tailor intervention according to specific needs. PMID:26516889

  12. Trajectory selection for the Mariner Jupiter/Saturn 1977 Project

    NASA Technical Reports Server (NTRS)

    Dyer, J. S.; Miles, R. F., Jr.

    1974-01-01

    This paper describes the use of decision analysis to facilitate a group decision-making problem in the selection of trajectories for the two spacecraft of the Mariner Jupiter/Saturn 1977 Project. This NASA project includes the participation of some eighty scientists divided by specialization among eleven science teams. A set of thirty-two candidate trajectory pairs was developed by the Project in collaboration with the science teams. Each science team then ordinally ranked and assigned cardinal utility function values to the trajectory pairs. These data and statistics derived from collective choice rules were used by the scientists in selecting the preferred trajectory pair.

  13. Trajectories of Marital Conflict Across the Life Course: Predictors and Interactions With Marital Happiness Trajectories.

    PubMed

    Kamp Dush, Claire M; Taylor, Miles G

    2012-03-01

    Using typologies outlined by Gottman and Fitzpatrick as well as institutional and companionate models of marriage, the authors conducted a latent class analysis of marital conflict trajectories using 20 years of data from the Marital Instability Over the Life Course study. Respondents were in one of three groups: high, medium (around the mean), or low conflict. Several factors predicted conflict trajectory group membership; respondents who believed in lifelong marriage and shared decisions equally with their spouse were more likely to report low and less likely to report high conflict. The conflict trajectories were intersected with marital happiness trajectories to examine predictors of high and low quality marriages. A stronger belief in lifelong marriage, shared decision making, and husbands sharing a greater proportion of housework were associated with an increased likelihood of membership in a high happiness, low conflict marriage, and a decreased likelihood of a low marital happiness group.

  14. 75 FR 12441 - Airworthiness Directives; MD Helicopters, Inc. Model MD-900 Helicopters

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-03-16

    ... FR 42824, August 6, 1999), Docket No. 98-SW-42-AD, for the MDHI Model MD-900 helicopters was published in the Federal Register on October 22, 2009 (74 FR 54495). The action proposed to decrease the... Regulatory Policies and Procedures (44 FR 11034, February 26, 1979); and 3. Will not have a...

  15. 75 FR 69862 - Airworthiness Directives; MD Helicopters, Inc. Model MD900 Helicopters

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-11-16

    ... beam bolt hole locations during maintenance on two MDHI Model MD900 helicopters. The actions specified... loss of control of the helicopter. DATES: Effective December 1, 2010, to all persons except those... AD was prompted by two reports of cracks detected in the hub in the area near the flex beam bolt...

  16. Systematically Constructing Kinetic Transition Network in Polypeptide from Top to Down: Trajectory Mapping

    PubMed Central

    Gong, Linchen; Zhou, Xin; Ouyang, Zhongcan

    2015-01-01

    Molecular dynamics (MD) simulation is an important tool for understanding bio-molecules in microscopic temporal/spatial scales. Besides the demand in improving simulation techniques to approach experimental scales, it becomes more and more crucial to develop robust methodology for precisely and objectively interpreting massive MD simulation data. In our previous work [J Phys Chem B 114, 10266 (2010)], the trajectory mapping (TM) method was presented to analyze simulation trajectories then to construct a kinetic transition network of metastable states. In this work, we further present a top-down implementation of TM to systematically detect complicate features of conformational space. We first look at longer MD trajectory pieces to get a coarse picture of transition network at larger time scale, and then we gradually cut the trajectory pieces in shorter for more details. A robust clustering algorithm is designed to more effectively identify the metastable states and transition events. We applied this TM method to detect the hierarchical structure in the conformational space of alanine-dodeca-peptide from microsecond to nanosecond time scales. The results show a downhill folding process of the peptide through multiple pathways. Even in this simple system, we found that single common-used order parameter is not sufficient either in distinguishing the metastable states or predicting the transition kinetics among these states. PMID:25962177

  17. Robust Classification of Small-Molecule Mechanism of Action Using a Minimalist High-Content Microscopy Screen and Multidimensional Phenotypic Trajectory Analysis.

    PubMed

    Twarog, Nathaniel R; Low, Jonathan A; Currier, Duane G; Miller, Greg; Chen, Taosheng; Shelat, Anang A

    2016-01-01

    Phenotypic screening through high-content automated microscopy is a powerful tool for evaluating the mechanism of action of candidate therapeutics. Despite more than a decade of development, however, high content assays have yielded mixed results, identifying robust phenotypes in only a small subset of compound classes. This has led to a combinatorial explosion of assay techniques, analyzing cellular phenotypes across dozens of assays with hundreds of measurements. Here, using a minimalist three-stain assay and only 23 basic cellular measurements, we developed an analytical approach that leverages informative dimensions extracted by linear discriminant analysis to evaluate similarity between the phenotypic trajectories of different compounds in response to a range of doses. This method enabled us to visualize biologically-interpretable phenotypic tracks populated by compounds of similar mechanism of action, cluster compounds according to phenotypic similarity, and classify novel compounds by comparing them to phenotypically active exemplars. Hierarchical clustering applied to 154 compounds from over a dozen different mechanistic classes demonstrated tight agreement with published compound mechanism classification. Using 11 phenotypically active mechanism classes, classification was performed on all 154 compounds: 78% were correctly identified as belonging to one of the 11 exemplar classes or to a different unspecified class, with accuracy increasing to 89% when less phenotypically active compounds were excluded. Importantly, several apparent clustering and classification failures, including rigosertib and 5-fluoro-2'-deoxycytidine, instead revealed more complex mechanisms or off-target effects verified by more recent publications. These results show that a simple, easily replicated, minimalist high-content assay can reveal subtle variations in the cellular phenotype induced by compounds and can correctly predict mechanism of action, as long as the appropriate

  18. How do we deal with multiple goals for care within an individual patient trajectory? A document content analysis of health service research papers on goals for care

    PubMed Central

    Berntsen, G K R; Gammon, D; Steinsbekk, A; Salamonsen, A; Foss, N; Ruland, C; Fønnebø, V

    2015-01-01

    Objectives Patients with complex long-term needs experience multiple parallel care processes, which may have conflicting or competing goals, within their individual patient trajectory (iPT). The alignment of multiple goals is often implicit or non-existent, and has received little attention in the literature. Research questions: (1) What goals for care relevant for the iPT can be identified from the literature? (2) What goal typology can be proposed based on goal characteristics? (3) How can professionals negotiate a consistent set of goals for the iPT? Design Document content analysis of health service research papers, on the topic of ‘goals for care’. Setting With the increasing prevalence of multimorbidity, guidance regarding the identification and alignment of goals for care across organisations and disciplines is urgently needed. Participants 70 papers that describe ‘goals for care’, ‘health’ or ‘the good healthcare process’ relevant to a general iPT, identified in a step-wise structured search of MEDLINE, Web of Science and Google Scholar. Results We developed a goal typology with four categories. Three categories are professionally defined: (1) Functional, (2) Biological/Disease and (3) Adaptive goals. The fourth category is the patient's personally defined goals. Professional and personal goals may conflict, in which case goal prioritisation by creation of a goal hierarchy can be useful. We argue that the patient has the moral and legal right to determine the goals at the top of such a goal hierarchy. Professionals can then translate personal goals into realistic professional goals such as standardised health outcomes linked to evidence-based guidelines. Thereby, when goals are aligned with one another, the iPT will be truly patient centred, while care follows professional guidelines. Conclusions Personal goals direct professional goals and define the success criteria of the iPT. However, making personal goals count requires brave and wide

  19. An Earth-Moon Transfer Trajectory Design and Analysis Considering Spacecraft's Visibility from Daejeon Ground Station at TLI and LOI Maneuvers

    NASA Astrophysics Data System (ADS)

    Woo, Jin; Song, Young-Joo; Park, Sang-Young; Kim, Hae-Dong; Sim, Eun-Sup

    2010-09-01

    The optimal Earth-Moon transfer trajectory considering spacecraft's visibility from the Daejeon ground station visibility at both the trans lunar injection (TLI) and lunar orbit insertion (LOI) maneuvers is designed. Both the TLI and LOI maneuvers are assumed to be impulsive thrust. As the successful execution of the TLI and LOI maneuvers are crucial factors among the various lunar mission parameters, it is necessary to design an optimal lunar transfer trajectory which guarantees the visibility from a specified ground station while executing these maneuvers. The optimal Earth-Moon transfer trajectory is simulated by modifying the Korean Lunar Mission Design Software using Impulsive high Thrust Engine (KLMDS-ITE) which is developed in previous studies. Four different mission scenarios are established and simulated to analyze the effects of the spacecraft's visibility considerations at the TLI and LOI maneuvers. As a result, it is found that the optimal Earth-Moon transfer trajectory, guaranteeing the spacecraft's visibility from Daejeon ground station at both the TLI and LOI maneuvers, can be designed with slight changes in total amount of delta-Vs. About 1% difference is observed with the optimal trajectory when none of the visibility condition is guaranteed, and about 0.04% with the visibility condition is only guaranteed at the time of TLI maneuver. The spacecraft's mass which can delivered to the Moon, when both visibility conditions are secured is shown to be about 534 kg with assumptions of KSLV-2's on-orbit mass about 2.6 tons. To minimize total mission delta-Vs, it is strongly recommended that visibility conditions at both the TLI and LOI maneuvers should be simultaneously implemented to the trajectory optimization algorithm.

  20. Trajectory Optimization: OTIS 4

    NASA Technical Reports Server (NTRS)

    Riehl, John P.; Sjauw, Waldy K.; Falck, Robert D.; Paris, Stephen W.

    2010-01-01

    The latest release of the Optimal Trajectories by Implicit Simulation (OTIS4) allows users to simulate and optimize aerospace vehicle trajectories. With OTIS4, one can seamlessly generate optimal trajectories and parametric vehicle designs simultaneously. New features also allow OTIS4 to solve non-aerospace continuous time optimal control problems. The inputs and outputs of OTIS4 have been updated extensively from previous versions. Inputs now make use of objectoriented constructs, including one called a metastring. Metastrings use a greatly improved calculator and common nomenclature to reduce the user s workload. They allow for more flexibility in specifying vehicle physical models, boundary conditions, and path constraints. The OTIS4 calculator supports common mathematical functions, Boolean operations, and conditional statements. This allows users to define their own variables for use as outputs, constraints, or objective functions. The user-defined outputs can directly interface with other programs, such as spreadsheets, plotting packages, and visualization programs. Internally, OTIS4 has more explicit and implicit integration procedures, including high-order collocation methods, the pseudo-spectral method, and several variations of multiple shooting. Users may switch easily between the various methods. Several unique numerical techniques such as automated variable scaling and implicit integration grid refinement, support the integration methods. OTIS4 is also significantly more user friendly than previous versions. The installation process is nearly identical on various platforms, including Microsoft Windows, Apple OS X, and Linux operating systems. Cross-platform scripts also help make the execution of OTIS and post-processing of data easier. OTIS4 is supplied free by NASA and is subject to ITAR (International Traffic in Arms Regulations) restrictions. Users must have a Fortran compiler, and a Python interpreter is highly recommended.

  1. Multiple Trajectories of Successful Aging of Older and Younger Cohorts

    ERIC Educational Resources Information Center

    Hsu, Hui-Chuan; Jones, Bobby L.

    2012-01-01

    Purpose: The purpose of this study was to apply group-based trajectory analysis to identify multiple successful aging trajectories by multiple indicators and to examine the factors related to successful aging among the elderly population in Taiwan. Design and Methods: Nation-representative longitudinal data collected from 1993 to 2007 and…

  2. Irreversibility with quantum trajectories.

    PubMed

    Wisniacki, D A; Borondo, F; Benito, R M

    2005-10-01

    Irreversibility is an important issue for many quantum processes. Loschmidt echoes, originally introduced as a way to gauge sensitivity to perturbations in quantum mechanics, have turned out to be a useful tool for its investigation. Following the philosophy supporting this idea, and using quantum trajectories as defined in the causal interpretation of quantum mechanics due to Bohm, we introduce in this paper a more informative alternative measure for irreversibility. The method is applied to the Bunimovich stadium billiard, a paradigmatic example of chaotic system, that constitutes an excellent model for mesoscopic devices.

  3. Dynamical collapse of trajectories

    NASA Astrophysics Data System (ADS)

    Biemond, J. J. Benjamin; de Moura, Alessandro P. S.; Grebogi, Celso; van de Wouw, Nathan; Nijmeijer, Henk

    2012-04-01

    Friction induces unexpected dynamical behaviour. In the paradigmatic pendulum and double-well systems with friction, modelled with differential inclusions, distinct trajectories can collapse onto a single point. Transversal homoclinic orbits display collapse and generate chaotic saddles with forward dynamics that is qualitatively different from the backward dynamics. The space of initial conditions converging to the chaotic saddle is fractal, but the set of points diverging from it is not: friction destroys the complexity of the forward dynamics by generating a unique horseshoe-like topology.

  4. Study on the structure of Bayer liquor with spectroscopy and MD simulation

    NASA Astrophysics Data System (ADS)

    Chen, Yun; Feng, Qiming; Liu, Kun; Chen, Yuandao; Zhang, Guofan

    2006-05-01

    The combination of spectroscopy analysis (Raman and IR) and MD simulation was applied to explore the structure characters of Bayer liquor. In this work, MD simulation had been used to probe the nature of sodium metal-aluminate ion pairing and its role in the stabilization of clusters. It was found that the maximum concentration of Al(OH)4- occurs in low caustic solutions, but in high caustic solution, the appearance of Al(OH)63- was found. Results of molecular dynamic simulation indicated that the formation of clustering of aluminates in solution, and the clusters stabilized by sodium ions made a contribution to the formation of polyaluminate.

  5. An endophytic taxol-producing fungus from Taxus x media, Aspergillus candidus MD3.

    PubMed

    Zhang, Peng; Zhou, Peng-Peng; Yu, Long-Jiang

    2009-04-01

    An endophytic taxol-producing fungus (strain MD3) isolated from the inner bark of Taxus x media was identified as Aspergillus candidus according to its morphological characteristics, physiological and biochemical characteristics, and 18S rRNA gene sequence analysis. Taxol produced by A. candidus MD3 was shown to be identical to authentic taxol analyzed by UV, HPLC, MS and nuclear magnetic resonance spectroscopy. The gene encoding the 10-deacetylbaccatin III-10-O-acetyl transferase, which catalyzes formation of the last diterpene intermediate in the taxol biosynthetic pathway, has been cloned from A. candidus MD3 for the first time and possesses high homology to the same gene found in Taxus spp.

  6. Benjamin Rush, MD: assassin or beloved healer?

    PubMed Central

    2000-01-01

    Benjamin Rush, MD (1745–1813), was not only the most well known physician in 18th-century America, he was also a patriot, philosopher, author, lecturer, fervent evangelist, politician, and dedicated social reformer. He was unshakable in his convictions, as well as self-righteous, caustic, satirical, humorless, and polemical. Unquestionably brilliant, he graduated from what later became Princeton University at age 14. He translated Hippocrates' Aphorisms from the Greek at age 17. He wrote the first textbook of chemistry to be published in America. He was by all accounts a devoted, if highly paternalistic, medical practitioner, who cared deeply for his patients' welfare. His principles or theories and his championship of extreme purging and bleeding (“depletion therapy”) have engendered 200 years of controversy and debate that continue today. The contradiction in his character is particularly well illustrated by his behavior during the Philadelphia yellow fever epidemic of 1793, as is briefly examined in this essay. PMID:16389324

  7. Benjamin Rush, MD: assassin or beloved healer?

    PubMed

    North, R L

    2000-01-01

    Benjamin Rush, MD (1745-1813), was not only the most well known physician in 18th-century America, he was also a patriot, philosopher, author, lecturer, fervent evangelist, politician, and dedicated social reformer. He was unshakable in his convictions, as well as self-righteous, caustic, satirical, humorless, and polemical. Unquestionably brilliant, he graduated from what later became Princeton University at age 14. He translated Hippocrates' Aphorisms from the Greek at age 17. He wrote the first textbook of chemistry to be published in America. He was by all accounts a devoted, if highly paternalistic, medical practitioner, who cared deeply for his patients' welfare. His principles or theories and his championship of extreme purging and bleeding ("depletion therapy") have engendered 200 years of controversy and debate that continue today. The contradiction in his character is particularly well illustrated by his behavior during the Philadelphia yellow fever epidemic of 1793, as is briefly examined in this essay. PMID:16389324

  8. Ashley W. Oughterson, MD: Surgeon, Soldier, Leader

    PubMed Central

    Kunstman, John W.; Longo, Walter E.

    2015-01-01

    Ashley W. Oughterson, MD, (1895-1956) was a longtime faculty surgeon at Yale University. He performed some of the earliest pancreatic resections in the United States. During World War II, Colonel Oughterson was the primary “Surgical Consultant” in the South Pacific and present at nearly every major battle. His meticulously kept diary is regarded as the foremost source detailing wartime surgical care. Colonel Oughterson led the initial Army team to survey Hiroshima and Nagasaki following the nuclear attacks. Thoughout his academic career at Yale, Oughterson was a key leader in several medical and surgical societies. As scientific director of the American Cancer Society, Oughterson lectured widely and guided research priorities in oncology following World War II. Oughterson also authored numerous benchmark papers in surgical oncology that continue to be cited today. These extensive contributions are examined here and demonstrate the wide-ranging impact Oughterson exerted during a formative period of American surgery. PMID:26029018

  9. Trajectories in parallel optics.

    PubMed

    Klapp, Iftach; Sochen, Nir; Mendlovic, David

    2011-10-01

    In our previous work we showed the ability to improve the optical system's matrix condition by optical design, thereby improving its robustness to noise. It was shown that by using singular value decomposition, a target point-spread function (PSF) matrix can be defined for an auxiliary optical system, which works parallel to the original system to achieve such an improvement. In this paper, after briefly introducing the all optics implementation of the auxiliary system, we show a method to decompose the target PSF matrix. This is done through a series of shifted responses of auxiliary optics (named trajectories), where a complicated hardware filter is replaced by postprocessing. This process manipulates the pixel confined PSF response of simple auxiliary optics, which in turn creates an auxiliary system with the required PSF matrix. This method is simulated on two space variant systems and reduces their system condition number from 18,598 to 197 and from 87,640 to 5.75, respectively. We perform a study of the latter result and show significant improvement in image restoration performance, in comparison to a system without auxiliary optics and to other previously suggested hybrid solutions. Image restoration results show that in a range of low signal-to-noise ratio values, the trajectories method gives a significant advantage over alternative approaches. A third space invariant study case is explored only briefly, and we present a significant improvement in the matrix condition number from 1.9160e+013 to 34,526.

  10. Posttraumatic Stress Symptoms and Trajectories in Child Sexual Abuse Victims: An Analysis of Sex Differences Using the National Survey of Child and Adolescent Well-Being

    ERIC Educational Resources Information Center

    Maikovich, Andrea Kohn; Koenen, Karestan C.; Jaffee, Sara R.

    2009-01-01

    Very few studies have prospectively examined sex differences in posttraumatic stress symptoms and symptom trajectories in youth victimized by childhood sexual abuse. This study addresses that question in a relatively large sample of children, drawn from the National Survey of Child and Adolescent Well-Being, who were between the ages of 8-16 years…

  11. Screening of UV-B-induced genes from apple peels by SSH: possible involvement of MdCOP1-mediated signaling cascade genes in anthocyanin accumulation.

    PubMed

    Peng, Ting; Saito, Takanori; Honda, Chikako; Ban, Yusuke; Kondo, Satoru; Liu, Ji-Hong; Hatsuyama, Yoshimichi; Moriguchi, Takaya

    2013-07-01

    Suppression subtractive hybridization (SSH) was employed to identify candidate genes involved in red coloration in apple peel with the ultraviolet (UV)-B-treated 'Mutsu'. After reverse Northern blotting verification, nearly 80 clones were successfully sequenced. Large portions of the expressed sequence tags (ESTs) are well characterized anthocyanin biosynthesis-related genes, such as chalcone synthase (11A5), flavonol synthase (12F3), anthocyanidin synthase (11H5) and UDP-glycosyl transferase (14A12) whose presence proved the success of SSH. Eight ESTs were selected for quantitative real-time polymerase chain reaction analysis and their expressions were all elevated in 'Induction', further confirming the reliability of the SSH library. One EST, 11F4 (CONSTITUTIVE PHOTOMORPHOGENIC 1: COP1) with putative function in light signal relay was further analyzed in 'Mutsu' and 'Tsugaru', along with MdHY5 (ELONGATED HYPOCOTYL 5: the downstream target of COP1), MdMYB22 (a possible flavonol-specific activator under the regulation of HY5, belonging to the SG7/PRODUCTION OF FLAVONOL GLYCOSIDES family) and MdMYBA. Results showed that MdCOP1, MdHY5, MdMYB22 and MdMYBA were all UV-B inducible genes and anthocyanin accumulation occurred after their increased expressions. Moreover, their expressions and anthocyanin content were enhanced under UV-B plus 17°C treatment. The presence of G box, a known consensus binding site of HY5, in the MdMYBA promoter region implicated that it could be regulated by MdHY5, which was verified by the result of the yeast one-hybrid analysis. Our data suggested that UV-B irradiation would induce the utmost upstream light signaling factor, MdCOP1, which activates MdHY5 signaling by binding to the promoter regions of MdMYBs, and finally leads to the red coloration of apple peels.

  12. A Distributed Trajectory-Oriented Approach to Managing Traffic Complexity

    NASA Technical Reports Server (NTRS)

    Idris, Husni; Wing, David J.; Vivona, Robert; Garcia-Chico, Jose-Luis

    2007-01-01

    In order to handle the expected increase in air traffic volume, the next generation air transportation system is moving towards a distributed control architecture, in which ground-based service providers such as controllers and traffic managers and air-based users such as pilots share responsibility for aircraft trajectory generation and management. While its architecture becomes more distributed, the goal of the Air Traffic Management (ATM) system remains to achieve objectives such as maintaining safety and efficiency. It is, therefore, critical to design appropriate control elements to ensure that aircraft and groundbased actions result in achieving these objectives without unduly restricting user-preferred trajectories. This paper presents a trajectory-oriented approach containing two such elements. One is a trajectory flexibility preservation function, by which aircraft plan their trajectories to preserve flexibility to accommodate unforeseen events. And the other is a trajectory constraint minimization function by which ground-based agents, in collaboration with air-based agents, impose just-enough restrictions on trajectories to achieve ATM objectives, such as separation assurance and flow management. The underlying hypothesis is that preserving trajectory flexibility of each individual aircraft naturally achieves the aggregate objective of avoiding excessive traffic complexity, and that trajectory flexibility is increased by minimizing constraints without jeopardizing the intended ATM objectives. The paper presents conceptually how the two functions operate in a distributed control architecture that includes self separation. The paper illustrates the concept through hypothetical scenarios involving conflict resolution and flow management. It presents a functional analysis of the interaction and information flow between the functions. It also presents an analytical framework for defining metrics and developing methods to preserve trajectory flexibility and

  13. Mathematical difficulties as decoupling of expectation and developmental trajectories

    PubMed Central

    McLean, Janet F.; Rusconi, Elena

    2014-01-01

    Recent years have seen an increase in research articles and reviews exploring mathematical difficulties (MD). Many of these articles have set out to explain the etiology of the problems, the possibility of different subtypes, and potential brain regions that underlie many of the observable behaviors. These articles are very valuable in a research field, which many have noted, falls behind that of reading and language disabilities. Here will provide a perspective on the current understanding of MD from a different angle, by outlining the school curriculum of England and the US and connecting these to the skills needed at different stages of mathematical understanding. We will extend this to explore the cognitive skills which most likely underpin these different stages and whose impairment may thus lead to mathematics difficulties at all stages of mathematics development. To conclude we will briefly explore interventions that are currently available, indicating whether these can be used to aid the different children at different stages of their mathematical development and what their current limitations may be. The principal aim of this review is to establish an explicit connection between the academic discourse, with its research base and concepts, and the developmental trajectory of abstract mathematical skills that is expected (and somewhat dictated) in formal education. This will possibly help to highlight and make sense of the gap between the complexity of the MD range in real life and the state of its academic science. PMID:24567712

  14. 77 FR 24838 - Safety Zone; Magothy River, Sillery Bay, MD

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-04-26

    ... ``Safety Zone; Magothy River, Sillery Bay, MD'' in the Federal Register (77 FR 11423). We received no... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Magothy River, Sillery Bay, MD AGENCY... waters of the Magothy River, in Sillery Bay, Maryland. This safety zone is necessary to provide for...

  15. 76 FR 51887 - Safety Zone; Patuxent River, Patuxent River, MD

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-08-19

    ...) entitled ``Safety Zone; Patuxent River, Patuxent River, MD'' in the Federal Register (76 FR 36447). We... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Patuxent River, Patuxent River, MD AGENCY... safety zone during the ``NAS Patuxent River Air Expo '11,'' which consists of aerial...

  16. 77 FR 5201 - Drawbridge Operation Regulation; Bear Creek, Dundalk, MD

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-02-02

    ... Federal Register (73 FR 3316). Public Meeting We do not now plan to hold a public meeting. But you may... SECURITY Coast Guard 33 CFR Part 117 RIN 1625-AA09 Drawbridge Operation Regulation; Bear Creek, Dundalk, MD... across Bear Creek, mile 3.4, between Dundalk and Sparrows Point, MD. The proposed change will alter...

  17. 78 FR 35773 - Airworthiness Directives; MD Helicopters, Inc. (MDHI), Helicopters

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-06-14

    ...'' under the DOT Regulatory Policies and Procedures (44 FR 11034, February 26, 1979); 3. Will not affect... Directives; MD Helicopters, Inc. (MDHI), Helicopters AGENCY: Federal Aviation Administration, DOT. ACTION... the MDHI Model MD900 helicopters with certain main rotor blade (MRB) retention bolts (bolts)...

  18. 77 FR 42459 - Airworthiness Directives; MD Helicopters, Inc. (MDHI) Helicopters

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-07-19

    ..., and MD900 helicopters to require determining the cure date for each NOTAR fan blade tension-torsion... (expiration date). For the MDHI Model MD900 helicopters, AD 2006-18-01 (71 FR 51095, August 29, 2006) already... these same type designs. Related Service Information We have reviewed one MDHI service bulletin,...

  19. 75 FR 10172 - Drawbridge Operation Regulation; Chester River, Chestertown, MD

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-03-05

    ... drawbridge operation regulations of the S213 Bridge, at mile 26.8, across Chester River at Chestertown, MD. This final rule allows the bridge to open on signal if at least six hours notice is given and will... Operation Regulations; Chester River, Chestertown, MD'' in the Federal Register (74 FR 48889). We...

  20. 33 CFR 110.72 - Blackhole Creek, Md.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Blackhole Creek, Md. 110.72... ANCHORAGE REGULATIONS Special Anchorage Areas § 110.72 Blackhole Creek, Md. The waters on the west side of Blackhole Creek, a tributary of Magothy River, southwest of a line bearing 310°30′ from the most...

  1. 33 CFR 110.72 - Blackhole Creek, Md.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Blackhole Creek, Md. 110.72... ANCHORAGE REGULATIONS Special Anchorage Areas § 110.72 Blackhole Creek, Md. The waters on the west side of Blackhole Creek, a tributary of Magothy River, southwest of a line bearing 310°30′ from the most...

  2. 33 CFR 110.72 - Blackhole Creek, Md.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Blackhole Creek, Md. 110.72... ANCHORAGE REGULATIONS Special Anchorage Areas § 110.72 Blackhole Creek, Md. The waters on the west side of Blackhole Creek, a tributary of Magothy River, southwest of a line bearing 310°30′ from the most...

  3. 33 CFR 110.72 - Blackhole Creek, Md.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Blackhole Creek, Md. 110.72... ANCHORAGE REGULATIONS Special Anchorage Areas § 110.72 Blackhole Creek, Md. The waters on the west side of Blackhole Creek, a tributary of Magothy River, southwest of a line bearing 310°30′ from the most...

  4. 33 CFR 110.72 - Blackhole Creek, Md.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Blackhole Creek, Md. 110.72... ANCHORAGE REGULATIONS Special Anchorage Areas § 110.72 Blackhole Creek, Md. The waters on the west side of Blackhole Creek, a tributary of Magothy River, southwest of a line bearing 310°30′ from the most...

  5. [Critical trajectories of female victims of gender violence: discourse analysis of women and staff professionals in Porto Alegre, Rio Grande do Sul State, Brazil].

    PubMed

    Meneghel, Stela Nazareth; Bairros, Fernanda; Mueller, Betânia; Monteiro, Débora; Oliveira, Lidiane Pellenz de; Collaziol, Marceli Emer

    2011-04-01

    This qualitative study aims to describe the trajectories of female victims of gender violence in Porto Alegre, Rio Grande do Sul State, Brazil. The methodology included in-depth interviews with women and staff, attempting to map the critical paths of women when they made the decision to seek professional help. We interviewed 21 women victims of gender violence and 25 professionals, including law enforcement officials, health and social workers, and nongovernmental organizations. The women's trajectories in the services were mapped, identifying facilitating factors and obstacles in the process of breaking with gender violence. The victims reported: pressure by professional staff to return to their marriages and police inefficiency in providing protection. The discourse of law enforcement officials and health and social workers showed a range of different concepts regarding violence, medicalization of violence, and network fragmentation.

  6. Life-course and cohort trajectories of mental health in the UK, 1991-2008--a multilevel age-period-cohort analysis.

    PubMed

    Bell, Andrew

    2014-11-01

    There is ongoing debate regarding the shape of life-course trajectories in mental health. Many argue the relationship is U-shaped, with mental health declining with age to mid-life, then improving. However, I argue that these models are beset by the age-period-cohort (APC) identification problem, whereby age, cohort and year of measurement are exactly collinear and their effects cannot be meaningfully separated. This means an apparent life-course effect could be explained by cohorts. This paper critiques two sets of literature: the substantive literature regarding life-course trajectories in mental health, and the methodological literature that claims erroneously to have 'solved' the APC identification problem statistically (e.g. using Yang and Land's Hierarchical APC-HAPC-model). I then use a variant of the HAPC model, making strong but justified assumptions that allow the modelling of life-course trajectories in mental health (measured by the General Health Questionnaire) net of any cohort effects, using data from the British Household Panel Survey, 1991-2008. The model additionally employs a complex multilevel structure that allows the relative importance of spatial (households, local authority districts) and temporal (periods, cohorts) levels to be assessed. Mental health is found to increase throughout the life-course; this slows at mid-life before worsening again into old age, but there is no evidence of a U-shape--I argue that such findings result from confounding with cohort processes (whereby more recent cohorts have generally worse mental health). Other covariates were also evaluated; income, smoking, education, social class, urbanity, ethnicity, gender and marriage were all related to mental health, with the latter two in particular affecting life-course and cohort trajectories. The paper shows the importance of understanding APC in life-course research generally, and mental health research in particular. PMID:25215933

  7. Does parenting help to explain socioeconomic inequalities in children's body mass index trajectories? Longitudinal analysis using the Growing Up in Scotland study

    PubMed Central

    Parkes, Alison; Sweeting, Helen; Young, Robert; Wight, Daniel

    2016-01-01

    Background Pathways leading to socioeconomic inequalities in young children's body mass index (BMI) are not well understood. This study examined whether parenting related to the physical and social context of children's food consumption helped to explain associations between maternal educational level and child BMI trajectory. Methods The study used data from 2957 families in a nationally representative birth cohort study surveyed from 2004 to 2011, with child BMI z-score measured 3 times (46, 70 and 94 months). Latent growth curve models examined associations between maternal education and BMI z-score trajectory, exploring mediating effects of parenting (positive mealtime interaction, informal meal setting and child bedroom TV) and unhealthy child diet. Results After adjusting for maternal BMI, maternal education predicted increased inequality in child BMI z-score trajectory slope over the study period. The slope index of inequality coefficient for maternal education, that is, the change in z-score associated with the lowest relative to the highest maternal education level, was 0.17, p<0.001. Indirect effects of lower maternal education on steeper BMI trajectory via parenting and/or unhealthy diet represented 89% of the total effect. Pathways via parenting and then unhealthy diet accounted for 68% of significant indirect pathways, with the remainder via unhealthy diet only. Bedroom TV was the most important parenting pathway, followed by informal meal setting. Conclusions Pathways via parenting helped to explain the emergence of inequalities in young children's BMI related to maternal education. Interventions targeting parental provision of child bedroom TV and informal meal setting might reduce these inequalities. PMID:27056682

  8. Life-course and cohort trajectories of mental health in the UK, 1991-2008--a multilevel age-period-cohort analysis.

    PubMed

    Bell, Andrew

    2014-11-01

    There is ongoing debate regarding the shape of life-course trajectories in mental health. Many argue the relationship is U-shaped, with mental health declining with age to mid-life, then improving. However, I argue that these models are beset by the age-period-cohort (APC) identification problem, whereby age, cohort and year of measurement are exactly collinear and their effects cannot be meaningfully separated. This means an apparent life-course effect could be explained by cohorts. This paper critiques two sets of literature: the substantive literature regarding life-course trajectories in mental health, and the methodological literature that claims erroneously to have 'solved' the APC identification problem statistically (e.g. using Yang and Land's Hierarchical APC-HAPC-model). I then use a variant of the HAPC model, making strong but justified assumptions that allow the modelling of life-course trajectories in mental health (measured by the General Health Questionnaire) net of any cohort effects, using data from the British Household Panel Survey, 1991-2008. The model additionally employs a complex multilevel structure that allows the relative importance of spatial (households, local authority districts) and temporal (periods, cohorts) levels to be assessed. Mental health is found to increase throughout the life-course; this slows at mid-life before worsening again into old age, but there is no evidence of a U-shape--I argue that such findings result from confounding with cohort processes (whereby more recent cohorts have generally worse mental health). Other covariates were also evaluated; income, smoking, education, social class, urbanity, ethnicity, gender and marriage were all related to mental health, with the latter two in particular affecting life-course and cohort trajectories. The paper shows the importance of understanding APC in life-course research generally, and mental health research in particular.

  9. Plasticity and Failure in Nanocrystalline BCC Metals via MD Simulation

    SciTech Connect

    Rudd, R E

    2010-02-12

    Advances in the ability to generate extremely high pressures in dynamic experiments such as at the National Ignition Facility has motivated the need for special materials optimized for those conditions as well as ways to probe the response of these materials as they are deformed. We need to develop a much deeper understanding of the behavior of materials subjected to high pressure, especially the effect of rate at the extremely high rates encountered in those experiments. Here we use large-scale molecular dynamics (MD) simulations of the high-rate deformation of nanocrystalline tantalum at pressures less than 100 GPa to investigate the processes associated with plastic deformation for strains up to 100%. We focus on 3D polycrystalline systems with typical grain sizes of 10-20 nm. We also study a rapidly quenched liquid (amorphous solid) tantalum. We apply a constant volume (isochoric), constant temperature (isothermal) shear deformation over a range of strain rates, and compute the resulting stress-strain curves to large strains for both uniaxial and biaxial compression. We study the rate dependence and identify plastic deformation mechanisms. The identification of the mechanisms is facilitated through a novel technique that computes the local grain orientation, returning it as a quaternion for each atom. This analysis technique is robust and fast, and has been used to compute the orientations on the fly during our parallel MD simulations on supercomputers. We find both dislocation and twinning processes are important, and they interact in the weak strain hardening in these extremely fine-grained microstructures. We also present some results on void growth in nanocrystalline BCC metals under tension.

  10. Ballistic projectile trajectory determining system

    DOEpatents

    Karr, T.J.

    1997-05-20

    A computer controlled system determines the three-dimensional trajectory of a ballistic projectile. To initialize the system, predictions of state parameters for a ballistic projectile are received at an estimator. The estimator uses the predictions of the state parameters to estimate first trajectory characteristics of the ballistic projectile. A single stationary monocular sensor then observes the actual first trajectory characteristics of the ballistic projectile. A comparator generates an error value related to the predicted state parameters by comparing the estimated first trajectory characteristics of the ballistic projectile with the observed first trajectory characteristics of the ballistic projectile. If the error value is equal to or greater than a selected limit, the predictions of the state parameters are adjusted. New estimates for the trajectory characteristics of the ballistic projectile are made and are then compared with actual observed trajectory characteristics. This process is repeated until the error value is less than the selected limit. Once the error value is less than the selected limit, a calculator calculates trajectory characteristics such a the origin and destination of the ballistic projectile. 8 figs.

  11. Ballistic projectile trajectory determining system

    DOEpatents

    Karr, Thomas J.

    1997-01-01

    A computer controlled system determines the three-dimensional trajectory of a ballistic projectile. To initialize the system, predictions of state parameters for a ballistic projectile are received at an estimator. The estimator uses the predictions of the state parameters to estimate first trajectory characteristics of the ballistic projectile. A single stationary monocular sensor then observes the actual first trajectory characteristics of the ballistic projectile. A comparator generates an error value related to the predicted state parameters by comparing the estimated first trajectory characteristics of the ballistic projectile with the observed first trajectory characteristics of the ballistic projectile. If the error value is equal to or greater than a selected limit, the predictions of the state parameters are adjusted. New estimates for the trajectory characteristics of the ballistic projectile are made and are then compared with actual observed trajectory characteristics. This process is repeated until the error value is less than the selected limit. Once the error value is less than the selected limit, a calculator calculates trajectory characteristics such a the origin and destination of the ballistic projectile.

  12. Generalization of the paraxial trajectory method for the analysis of non-paraxial rays: simulation program G-optk for electron gun characterization.

    PubMed

    Fujita, Shin; Takebe, Masahiro; Ushio, Wataru; Shimoyama, Hiroshi

    2010-01-01

    The paraxial trajectory method has been generalized for the application to the cathode rays inside electron guns. The generalized method can handle rays that initially make a large angle with the optical axis with a satisfactory accuracy. The key to success of the generalization is the adoption of the trigonometric function sine for the trajectory slope specification, instead of the conventional use of the tangent. Formulas have been derived to relate the ray conditions (position and slope of the ray at reference planes) on the cathode to those at the crossover plane using third-order polynomial functions. Some of the polynomial coefficients can be used as the optical parameters in the characterization of electron sources; the electron gun focal length gives a quantitative estimate of both the crossover size and the angular current intensity. An electron gun simulation program G-optk has been developed based on the mathematical formulations presented in the article. The program calculates the principal paraxial trajectories and the relevant optical parameters from axial potentials and fields. It gives the electron-optical-column designers a clear physical picture of the electron gun in a much more faster way than the conventional ray-tracing methods.

  13. Weighing in on the issue: a longitudinal analysis of the influence of selected individual factors and the sports context on the developmental trajectories of eating pathology among adolescents.

    PubMed

    Fay, Kristen; Lerner, Richard M

    2013-01-01

    Eating disorders, and related issues (e.g., body dissatisfaction, weight control behaviors), represent pressing and prevalent health problems that affect American adolescents with alarming frequency and potentially chronic consequences. However, more longitudinal research is needed to elucidate the developmental processes that increase or maintain risk for, and that protect against, eating- and weight-related problems among adolescents. Accordingly, the current study used longitudinal data from 1,050 male and female (68.0 %) adolescents (Grades 9-11)-the majority of whom were European Americans (72.2 %)-who participated in the 4-H Study of Positive Youth Development to (a) describe trajectories of adolescents' eating pathology and body dissatisfaction, (b) identify individual and contextual correlates of these pathways, (c) examine whether trajectories of eating pathology and body dissatisfaction related to adolescents' depressive symptoms, and (d) elucidate whether sports participation moderated associations between specific trajectories of eating pathology and body dissatisfaction and adolescents' depressive symptoms. Results suggest that the diverse pathways of eating pathology and body dissatisfaction that exist across middle adolescence, in combination with adolescents' sports participation, have important implications for the positive and problematic development of our youth. In addition, the findings underscore the need to evaluate the interindividual differences that exist in regard to how sports participation may relate positively and negatively to developmental outcomes. PMID:23111843

  14. Weighing in on the issue: a longitudinal analysis of the influence of selected individual factors and the sports context on the developmental trajectories of eating pathology among adolescents.

    PubMed

    Fay, Kristen; Lerner, Richard M

    2013-01-01

    Eating disorders, and related issues (e.g., body dissatisfaction, weight control behaviors), represent pressing and prevalent health problems that affect American adolescents with alarming frequency and potentially chronic consequences. However, more longitudinal research is needed to elucidate the developmental processes that increase or maintain risk for, and that protect against, eating- and weight-related problems among adolescents. Accordingly, the current study used longitudinal data from 1,050 male and female (68.0 %) adolescents (Grades 9-11)-the majority of whom were European Americans (72.2 %)-who participated in the 4-H Study of Positive Youth Development to (a) describe trajectories of adolescents' eating pathology and body dissatisfaction, (b) identify individual and contextual correlates of these pathways, (c) examine whether trajectories of eating pathology and body dissatisfaction related to adolescents' depressive symptoms, and (d) elucidate whether sports participation moderated associations between specific trajectories of eating pathology and body dissatisfaction and adolescents' depressive symptoms. Results suggest that the diverse pathways of eating pathology and body dissatisfaction that exist across middle adolescence, in combination with adolescents' sports participation, have important implications for the positive and problematic development of our youth. In addition, the findings underscore the need to evaluate the interindividual differences that exist in regard to how sports participation may relate positively and negatively to developmental outcomes.

  15. General order parameter based correlation analysis of protein backbone motions between experimental NMR relaxation measurements and molecular dynamics simulations

    SciTech Connect

    Liu, Qing; Shi, Chaowei; Yu, Lu; Zhang, Longhua; Xiong, Ying; Tian, Changlin

    2015-02-13

    Internal backbone dynamic motions are essential for different protein functions and occur on a wide range of time scales, from femtoseconds to seconds. Molecular dynamic (MD) simulations and nuclear magnetic resonance (NMR) spin relaxation measurements are valuable tools to gain access to fast (nanosecond) internal motions. However, there exist few reports on correlation analysis between MD and NMR relaxation data. Here, backbone relaxation measurements of {sup 15}N-labeled SH3 (Src homology 3) domain proteins in aqueous buffer were used to generate general order parameters (S{sup 2}) using a model-free approach. Simultaneously, 80 ns MD simulations of SH3 domain proteins in a defined hydrated box at neutral pH were conducted and the general order parameters (S{sup 2}) were derived from the MD trajectory. Correlation analysis using the Gromos force field indicated that S{sup 2} values from NMR relaxation measurements and MD simulations were significantly different. MD simulations were performed on models with different charge states for three histidine residues, and with different water models, which were SPC (simple point charge) water model and SPC/E (extended simple point charge) water model. S{sup 2} parameters from MD simulations with charges for all three histidines and with the SPC/E water model correlated well with S{sup 2} calculated from the experimental NMR relaxation measurements, in a site-specific manner. - Highlights: • Correlation analysis between NMR relaxation measurements and MD simulations. • General order parameter (S{sup 2}) as common reference between the two methods. • Different protein dynamics with different Histidine charge states in neutral pH. • Different protein dynamics with different water models.

  16. Leroy D Vandam, MD: an anesthesia journey.

    PubMed

    Ortega, Rafael A

    2005-08-01

    Leroy D Vandam, MD was a remarkable man--an intricate amalgamation of an artist, scientist, and physician. He was a bastion of medical historical knowledge. Dr Vandam became a most influential anesthesiologist, some say, a giant. He was an example of someone who, with resolve, overcame adversity. His artwork is displayed in countless places, and several of his paintings form part of the Wood Library Museum Heritage Series. Dr Vandam was first a surgeon, but he abandoned surgery and pursued a career in anesthesiology under the leadership of Robert Dripps. He completed his residency training at the University of Pennsylvania and joined its staff in 1949. When he arrived at Brigham and Women's Hospital in the 1950s as director of anesthesia, he embarked on one of the most illustrious careers in American anesthesiology. Dr Vandam published more than 250 original articles, chapters, abstracts, and other reports on a wide variety of subjects including history, art, and pharmacology. His classic article on the complications of neuroaxial blocks is a seminal work in anesthesiology. This article describes how an anesthesiologist who shared an interest with Dr Vandam in the history of anesthesiology came to produce a movie based on his career, the evolution of anesthesia equipment, and the transformation of our specialty. PMID:16102694

  17. Leroy D Vandam, MD: an anesthesia journey.

    PubMed

    Ortega, Rafael A

    2005-08-01

    Leroy D Vandam, MD was a remarkable man--an intricate amalgamation of an artist, scientist, and physician. He was a bastion of medical historical knowledge. Dr Vandam became a most influential anesthesiologist, some say, a giant. He was an example of someone who, with resolve, overcame adversity. His artwork is displayed in countless places, and several of his paintings form part of the Wood Library Museum Heritage Series. Dr Vandam was first a surgeon, but he abandoned surgery and pursued a career in anesthesiology under the leadership of Robert Dripps. He completed his residency training at the University of Pennsylvania and joined its staff in 1949. When he arrived at Brigham and Women's Hospital in the 1950s as director of anesthesia, he embarked on one of the most illustrious careers in American anesthesiology. Dr Vandam published more than 250 original articles, chapters, abstracts, and other reports on a wide variety of subjects including history, art, and pharmacology. His classic article on the complications of neuroaxial blocks is a seminal work in anesthesiology. This article describes how an anesthesiologist who shared an interest with Dr Vandam in the history of anesthesiology came to produce a movie based on his career, the evolution of anesthesia equipment, and the transformation of our specialty.

  18. DFT-MD simulations of shocked Xenon

    NASA Astrophysics Data System (ADS)

    Magyar, Rudolph J.; Mattsson, Thomas R.

    2009-03-01

    Xenon is not only a technologically important element used in laser technologies, jet propulsion and dental anesthesia, but it is also arguably the simplest material in which to study the metal-insulator transition at high pressure. Because of its closed shell electronic configuration, Xenon is often assumed to be chemically inert, interacting almost entirely through the van der Waals interaction, and at liquid density, is typically modeled well using Leonard-Jones potentials. However, such modeling has a limited range of validity as Xenon is known to form compounds at normal conditions and likely exhibits considerably more chemistry at higher densities when hybridization of occupied orbitals becomes significant. In this talk, we present DFT-MD simulations of shocked liquid Xenon with the goal of developing an improved equation of state. The relative importance of the van der Waals interaction compared to other Coulomb interactions is considered, and estimates of the relative accuracy of various density functionals are quantified. Sandia is a multiprogram laboratory operated by Sandia Corporation, a Lockheed Martin Company, for the United States Department of Energy's National Nuclear Security Administration under contract DE-AC04-94AL85000.

  19. Lunar Cube Transfer Trajectory Options

    NASA Technical Reports Server (NTRS)

    Folta, David; Dichmann, Donald J.; Clark, Pamela; Haapala, Amanda; Howell, Kathleen

    2015-01-01

    Numerous Earth-Moon trajectory and lunar orbit options are available for Cubesat missions. Given the limited Cubesat injection infrastructure, transfer trajectories are contingent upon the modification of an initial condition of the injected or deployed orbit. Additionally, these transfers can be restricted by the selection or designs of Cubesat subsystems such as propulsion or communication. Nonetheless, many trajectory options can be considered which have a wide range of transfer durations, fuel requirements, and final destinations. Our investigation of potential trajectories highlights several options including deployment from low Earth orbit (LEO), geostationary transfer orbits (GTO), and higher energy direct lunar transfers and the use of longer duration Earth-Moon dynamical systems. For missions with an intended lunar orbit, much of the design process is spent optimizing a ballistic capture while other science locations such as Sun-Earth libration or heliocentric orbits may simply require a reduced Delta-V imparted at a convenient location along the trajectory.

  20. Lunar Cube Transfer Trajectory Options

    NASA Technical Reports Server (NTRS)

    Folta, David; Dichmann, Donald James; Clark, Pamela E.; Haapala, Amanda; Howell, Kathleen

    2015-01-01

    Numerous Earth-Moon trajectory and lunar orbit options are available for Cubesat missions. Given the limited Cubesat injection infrastructure, transfer trajectories are contingent upon the modification of an initial condition of the injected or deployed orbit. Additionally, these transfers can be restricted by the selection or designs of Cubesat subsystems such as propulsion or communication. Nonetheless, many trajectory options can b e considered which have a wide range of transfer duration, fuel requirements, and final destinations. Our investigation of potential trajectories highlights several options including deployment from low Earth orbit (LEO) geostationary transfer orbits (GTO) and higher energy direct lunar transfer and the use of longer duration Earth-Moon dynamical systems. For missions with an intended lunar orbit, much of the design process is spent optimizing a ballistic capture while other science locations such as Sun-Earth libration or heliocentric orbits may simply require a reduced Delta-V imparted at a convenient location along the trajectory.

  1. Four-body trajectory optimization

    NASA Technical Reports Server (NTRS)

    Pu, C. L.; Edelbaum, T. N.

    1974-01-01

    A comprehensive optimization program has been developed for computing fuel-optimal trajectories between the earth and a point in the sun-earth-moon system. It presents methods for generating fuel optimal two-impulse trajectories which may originate at the earth or a point in space and fuel optimal three-impulse trajectories between two points in space. The extrapolation of the state vector and the computation of the state transition matrix are accomplished by the Stumpff-Weiss method. The cost and constraint gradients are computed analytically in terms of the terminal state and the state transition matrix. The 4-body Lambert problem is solved by using the Newton-Raphson method. An accelerated gradient projection method is used to optimize a 2-impulse trajectory with terminal constraint. The Davidon's Variance Method is used both in the accelerated gradient projection method and the outer loop of a 3-impulse trajectory optimization problem.

  2. An endophytic taxol-producing fungus from Taxus media, Cladosporium cladosporioides MD2.

    PubMed

    Zhang, Peng; Zhou, Peng-Peng; Yu, Long-Jiang

    2009-09-01

    Fermentation processes using taxol-producing fungi other than Taxus spp. may be an alternative way to produce taxol, which is an important antitumor agent used widely in the clinic setting. In this study, a taxol-producing endophytic fungus strain MD2 was isolated from the inner bark of Taxus media. Strain MD2 produced taxol when grown in potato dextrose liquid medium. The fungal taxol-which was analyzed by ultraviolet, high-performance liquid chromatography and mass spectrometry-was shown to be identical to authentic taxol and 10-deacetylbaccatin III. Further analysis with nuclear magnetic resonance (NMR) spectroscopy to show the chemical structure of the fungal taxol indicated that the fungal taxol produced an NMR spectrum identical to that of authentic taxol. Strain MD2 was identified as Cladosporium cladosporioides according to morphology of the fungal culture, characteristics of the spores, and analysis of 18S rDNA sequence. In addition, 10-deacetylbaccatin III-10-O-acetyl transferase gene of C. cladosporioides MD2 was cloned for the first time and was shown to share 99% identity with that of T. x media and 97% identity with that of T. wallichiana var. mairei.

  3. Iso-chemical potential trajectories in the P-T plane for He II

    NASA Technical Reports Server (NTRS)

    Maytal, B.; Nissen, J. A.; Van Sciver, S. W.

    1990-01-01

    Trajectories of constant chemical potential in the P-T plane serve as an integral formulation of London's equation. The trajectories are useful for analysis and synthesis of fountain effect pump performance. A family of trajectories is generated from available numerical codes.

  4. Empirical Model for Predicting Rockfall Trajectory Direction

    NASA Astrophysics Data System (ADS)

    Asteriou, Pavlos; Tsiambaos, George

    2016-03-01

    A methodology for the experimental investigation of rockfall in three-dimensional space is presented in this paper, aiming to assist on-going research of the complexity of a block's response to impact during a rockfall. An extended laboratory investigation was conducted, consisting of 590 tests with cubical and spherical blocks made of an artificial material. The effects of shape, slope angle and the deviation of the post-impact trajectory are examined as a function of the pre-impact trajectory direction. Additionally, an empirical model is proposed that estimates the deviation of the post-impact trajectory as a function of the pre-impact trajectory with respect to the slope surface and the slope angle. This empirical model is validated by 192 small-scale field tests, which are also presented in this paper. Some important aspects of the three-dimensional nature of rockfall phenomena are highlighted that have been hitherto neglected. The 3D space data provided in this study are suitable for the calibration and verification of rockfall analysis software that has become increasingly popular in design practice.

  5. Hyper-X Mach 10 Trajectory Reconstruction

    NASA Technical Reports Server (NTRS)

    Karlgaard, Christopher D.; Martin, John G.; Tartabini, Paul V.; Thornblom, Mark N.

    2005-01-01

    This paper discusses the formulation and development of a trajectory reconstruction tool for the NASA X-43A/Hyper-X high speed research vehicle, and its implementation for the reconstruction and analysis of flight test data. Extended Kalman filtering techniques are employed to reconstruct the trajectory of the vehicle, based upon numerical integration of inertial measurement data along with redundant measurements of the vehicle state. The equations of motion are formulated in order to include the effects of several systematic error sources, whose values may also be estimated by the filtering routines. Additionally, smoothing algorithms have been implemented in which the final value of the state (or an augmented state that includes other systematic error parameters to be estimated) and covariance are propagated back to the initial time to generate the best-estimated trajectory, based upon all available data. The methods are applied to the problem of reconstructing the trajectory of the Hyper-X vehicle from data obtained during the Mach 10 test flight, which occurred on November 16th 2004.

  6. 33 CFR 334.180 - Patuxent River, Md.; restricted areas, U.S. Naval Air Test Center, Patuxent River, Md.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 3 2010-07-01 2010-07-01 false Patuxent River, Md.; restricted areas, U.S. Naval Air Test Center, Patuxent River, Md. 334.180 Section 334.180 Navigation and Navigable Waters CORPS OF ENGINEERS, DEPARTMENT OF THE ARMY, DEPARTMENT OF DEFENSE DANGER ZONE AND RESTRICTED...

  7. Gene Expression Profiling in rMd5- and rMd5-delta-meq-Infected Chickens

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Marek’s disease (MD) is a lymphoproliferative disorder of domestic chickens caused by a highly contagious and oncogenic alpha-herpesvirus, Marek’s disease virus (MDV). MD is characterized by bursal/thymic atrophy and rapid onset of T cell lymphomas that infiltrate lymphoid tissues, visceral organs,...

  8. 75 FR 12464 - Airworthiness Directives; McDonnell Douglas Corporation Model MD-11 and MD-11F Airplanes

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-03-16

    ...'' (66 FR 23086, May 7, 2001). In addition to new airworthiness standards for transport airplanes and new... Procedures (44 FR 11034, February 26, 1979), and 3. Will not have a significant economic impact, positive or... Directives; McDonnell Douglas Corporation Model MD- 11 and MD-11F Airplanes AGENCY: Federal...

  9. Diagnostic throughput factor analysis for en-route airspace and optimal aircraft trajectory generation based on capacity prediction and controller workload

    NASA Astrophysics Data System (ADS)

    Shin, Sanghyun

    Today's National Airspace System (NAS) is approaching its limit to efficiently cope with the increasing air traffic demand. Next Generation Air Transportation System (NextGen) with its ambitious goals aims to make the air travel more predictable with fewer delays, less time sitting on the ground and holding in the air to improve the performance of the NAS. However, currently the performance of the NAS is mostly measured using delay-based metrics which do not capture a whole range of important factors that determine the quality and level of utilization of the NAS. The factors affecting the performance of the NAS are themselves not well defined to begin with. To address these issues, motivated by the use of throughput-based metrics in many areas such as ground transportation, wireless communication and manufacturing, this thesis identifies the different factors which majorly affect the performance of the NAS as demand (split into flight cancellation and flight rerouting), safe separation (split into conflict and metering) and weather (studied as convective weather) through careful comparison with other applications and performing empirical sensitivity analysis. Additionally, the effects of different factors on the NAS's performance are quantitatively studied using real traffic data with the Future ATM Concepts Evaluation Tool (FACET) for various sectors and centers of the NAS on different days. In this thesis we propose a diagnostic tool which can analyze the factors that have greater responsibility for regions of poor and better performances of the NAS. Based on the throughput factor analysis for en-route airspace, it was found that weather and controller workload are the major factors that decrease the efficiency of the airspace. Also, since resources such as air traffic controllers, infrastructure and airspace are limited, it is becoming increasingly important to use the available resources efficiently. To alleviate the impact of the weather and controller

  10. Development of a Mars Airplane Entry, Descent, and Flight Trajectory

    NASA Technical Reports Server (NTRS)

    Murray, James E.; Tartabini, Paul V.

    2001-01-01

    An entry, descent, and flight (EDF) trajectory profile for a Mars airplane mission is defined as consisting of the following elements: ballistic entry of an aeroshell; supersonic deployment of a decelerator parachute; subsonic release of a heat shield; release, unfolding, and orientation of an airplane to flight attitude; and execution of a pull up maneuver to achieve trimmed, horizontal flight. Using the Program to Optimize Simulated Trajectories (POST) a trajectory optimization problem was formulated. Model data representative of a specific Mars airplane configuration, current models of the Mars surface topography and atmosphere, and current estimates of the interplanetary trajectory, were incorporated into the analysis. The goal is to develop an EDF trajectory to maximize the surface-relative altitude of the airplane at the end of a pull up maneuver, while subject to the mission design constraints. The trajectory performance was evaluated for three potential mission sites and was found to be site-sensitive. The trajectory performance, examined for sensitivity to a number of design and constraint variables, was found to be most sensitive to airplane mass, aerodynamic performance characteristics, and the pull up Mach constraint. Based on the results of this sensitivity study, an airplane-drag optimized trajectory was developed that showed a significant performance improvement.

  11. Six-year trajectories of post-traumatic stress and severe psychological distress symptoms and associations with timing of trauma exposure, ongoing adversity and sense of injustice: a latent transition analysis of a community cohort in conflict-affected Timor-Leste

    PubMed Central

    Rees, S; Steel, Z; Tam, N; Soares, Z; Soares, C; Silove, DM

    2016-01-01

    Objectives To identify the 6-year trajectories of post-traumatic stress symptoms (PTSS) and psychological distress symptoms, and examine for associations with timing of trauma exposure, ongoing adversity and with the sense of injustice in conflict-affected Timor-Leste. Setting A whole-of-household survey was conducted in 2004 and 2010 in Dili, the capital of Timor-Leste. Participants 1022 adults were followed up over 6 years (retention rate 84.5%). Interviews were conducted by field workers applying measures of traumatic events (TEs), ongoing adversity, a sense of injustice, PTS symptoms and psychological distress. Results Latent transition analysis supported a 3-class longitudinal model (psychological distress, comorbid symptoms and low symptoms). We derived 4 composite trajectories comprising recovery (20.8%), a persisting morbidity trajectory (7.2%), an incident trajectory (37.2%) and a low-symptom trajectory (34.7%). Compared with the low-symptom trajectory, the persistent and incident trajectories reported greater stress arising from poverty and family conflict, higher TE exposure for 2 historical periods, and a sense of injustice for 2 historical periods. The persistent trajectory was unique in reporting greater TE exposure in the Indonesian occupation, whereas the incident trajectory reported greater TE exposure during the later internal conflict that occurred between baseline and follow-up. Compared with the low-symptom trajectory, the incident trajectory reported a greater sense of injustice relating to the periods of the Indonesian occupation and independence. The persistent trajectory was characterised by a sense of injustice relating to the internal conflict and contemporary times. The recovery trajectory was characterised by the absence of these risk factors, the only difference from the low-symptom trajectory being that the former reported a sense of injustice for the period surrounding independence. Conclusions Our findings suggest that the timing

  12. Trajectories of Marital Conflict across the Life Course: Predictors and Interactions with Marital Happiness Trajectories

    ERIC Educational Resources Information Center

    Kamp Dush, Claire M.; Taylor, Miles G.

    2012-01-01

    Using typologies outlined by Gottman and Fitzpatrick as well as institutional and companionate models of marriage, the authors conducted a latent class analysis of marital conflict trajectories using 20 years of data from the Marital Instability Over the Life Course study. Respondents were in one of three groups: high, medium (around the mean), or…

  13. MD-PhD training: looking back and looking forward.

    PubMed

    Bonham, Ann C

    2014-01-01

    MD-PhD programs provide rigorous, integrated training for physician-scientists, enabling them to frame scientific questions in unique ways and to apply clinical insight to fundamental science. Few would question the influential contributions of MD-PhD physician-scientists in advancing medical science. In this issue of Academic Medicine, Jeffe et al affirm high levels of excellence in educational outcomes from MD-PhD training programs at U.S. MD-granting medical schools, especially programs that receive funding from the NIH Medical Scientist Training Program (MSTP). The author of this commentary observes that, in the face of current economic pressures, comprehensive, longitudinal national outcomes data from MSTP- and non-MSTP-funded MD-PhD programs will help verify the value provided by MD-PhD physician-scientists. She proposes that MD-PhD programs should better prepare the next generation of physician-scientists for future research environments, which will provide new technologies, venues, and modalities. These research environments will be more closely integrated within health care delivery systems, extend into diverse communities and regions, and employ complex technologies. MD-PhD physician-scientists also will train and gain expertise in broadening areas of research, such as health policy, health economics, clinical epidemiology, and medical informatics. Program leaders are ideally situated to foster innovative learning environments and methodologies. By sharing their innovations, they can help ensure production of a diverse MD-PhD physician-scientist workforce, prepared to engage in myriad research opportunities to meet patient and population needs in a new environment. PMID:24280863

  14. MD-PhD training: looking back and looking forward.

    PubMed

    Bonham, Ann C

    2014-01-01

    MD-PhD programs provide rigorous, integrated training for physician-scientists, enabling them to frame scientific questions in unique ways and to apply clinical insight to fundamental science. Few would question the influential contributions of MD-PhD physician-scientists in advancing medical science. In this issue of Academic Medicine, Jeffe et al affirm high levels of excellence in educational outcomes from MD-PhD training programs at U.S. MD-granting medical schools, especially programs that receive funding from the NIH Medical Scientist Training Program (MSTP). The author of this commentary observes that, in the face of current economic pressures, comprehensive, longitudinal national outcomes data from MSTP- and non-MSTP-funded MD-PhD programs will help verify the value provided by MD-PhD physician-scientists. She proposes that MD-PhD programs should better prepare the next generation of physician-scientists for future research environments, which will provide new technologies, venues, and modalities. These research environments will be more closely integrated within health care delivery systems, extend into diverse communities and regions, and employ complex technologies. MD-PhD physician-scientists also will train and gain expertise in broadening areas of research, such as health policy, health economics, clinical epidemiology, and medical informatics. Program leaders are ideally situated to foster innovative learning environments and methodologies. By sharing their innovations, they can help ensure production of a diverse MD-PhD physician-scientist workforce, prepared to engage in myriad research opportunities to meet patient and population needs in a new environment.

  15. Epock: rapid analysis of protein pocket dynamics

    PubMed Central

    Laurent, Benoist; Chavent, Matthieu; Cragnolini, Tristan; Dahl, Anna Caroline E.; Pasquali, Samuela; Derreumaux, Philippe; Sansom, Mark S.P.; Baaden, Marc

    2015-01-01

    Summary: The volume of an internal protein pocket is fundamental to ligand accessibility. Few programs that compute such volumes manage dynamic data from molecular dynamics (MD) simulations. Limited performance often prohibits analysis of large datasets. We present Epock, an efficient command-line tool that calculates pocket volumes from MD trajectories. A plugin for the VMD program provides a graphical user interface to facilitate input creation, run Epock and analyse the results. Availability and implementation: Epock C++ source code, Python analysis scripts, VMD Tcl plugin, documentation and installation instructions are freely available at http://epock.bitbucket.org. Contact: benoist.laurent@gmail.com or baaden@smplinux.de Supplementary information: Supplementary data are available at Bioinformatics online. PMID:25505095

  16. Fractional trajectories: Decorrelation versus friction

    NASA Astrophysics Data System (ADS)

    Svenkeson, A.; Beig, M. T.; Turalska, M.; West, B. J.; Grigolini, P.

    2013-11-01

    The fundamental connection between fractional calculus and subordination processes is explored and affords a physical interpretation of a fractional trajectory, that being an average over an ensemble of stochastic trajectories. Heretofore what has been interpreted as intrinsic friction, a form of non-Markovian dissipation that automatically arises from adopting the fractional calculus, is shown to be a manifestation of decorrelations between trajectories. We apply the general theory developed herein to the Lotka-Volterra ecological model, providing new insight into the final equilibrium state. The relaxation time to achieve this state is also considered.

  17. Michael S. Brown, MD and Joseph L. Goldstein, MD. 1985 Nobel laureates in medicine.

    PubMed

    Brown, M S; Goldstein, J L

    1996-02-01

    When Michael S. Brown, MD and Joseph L. Goldstein, MD first met as interns at the Massachusetts General Hospital in 1966, they could hardly have imagined that their careers would continue to be intertwined some 30 years later. It was shortly following their arrival as clinical associates at the National Institutes of Health in 1968 that the pair developed an interest in abnormalities of cholesterol metabolism. Bolstered by epidemiologic data that showed elevated cholesterol levels in many patients with myocardial infarction, Brown and Goldstein, who relocated to the University of Texas Southwestern Medical Center in 1972, began a search for receptors important in cholesterol homeostasis. These studies, performed in their early stages while juggling clinical duties at Parkland Hospital, culminated in a series of scientific achievements which merited among other honors the Hazen Award in 1982, the Lasker Award in 1985, and the Nobel Prize in Medicine in 1985. Today, as Regental Professors of the University of Texas, Brown and Goldstein head a laboratory group which continues to test the cutting edge of medical research. Although impressed with the pace of technological advances in biology, the declining role of clinically oriented physicians in biomedical research troubles the pair. Interviewed in their library in Dallas, Brown and Goldstein spoke about the complicated balance of science, medicine, and education necessary to produce another generation of successful investigators.

  18. Young adults' trajectories of Ecstasy use: a population based study.

    PubMed

    Smirnov, Andrew; Najman, Jake M; Hayatbakhsh, Reza; Plotnikova, Maria; Wells, Helene; Legosz, Margot; Kemp, Robert

    2013-11-01

    Young adults' Ecstasy use trajectories have important implications for individual and population-level consequences of Ecstasy use, but little relevant research has been conducted. This study prospectively examines Ecstasy trajectories in a population-based sample. Data are from the Natural History Study of Drug Use, a retrospective/prospective cohort study conducted in Australia. Population screening identified a probability sample of Ecstasy users aged 19-23 years. Complete data for 30 months of follow-up, comprising 4 time intervals, were available for 297 participants (88.4% of sample). Trajectories were derived using cluster analysis based on recent Ecstasy use at each interval. Trajectory predictors were examined using a generalized ordered logit model and included Ecstasy dependence (World Mental Health Composite International Diagnostic Instrument), psychological distress (Hospital Anxiety Depression Scale), aggression (Young Adult Self Report) and contextual factors (e.g. attendance at electronic/dance music events). Three Ecstasy trajectories were identified (low, intermediate and high use). At its peak, the high-use trajectory involved 1-2 days Ecstasy use per week. Decreasing frequency of use was observed for intermediate and high-use trajectories from 12 months, independently of market factors. Intermediate and high-use trajectory membership was predicted by past Ecstasy consumption (>70 pills) and attendance at electronic/dance music events. High-use trajectory members were unlikely to have used Ecstasy for more than 3 years and tended to report consistently positive subjective effects at baseline. Given the social context and temporal course of Ecstasy use, Ecstasy trajectories might be better understood in terms of instrumental rather than addictive drug use patterns.

  19. Young adults' trajectories of Ecstasy use: a population based study.

    PubMed

    Smirnov, Andrew; Najman, Jake M; Hayatbakhsh, Reza; Plotnikova, Maria; Wells, Helene; Legosz, Margot; Kemp, Robert

    2013-11-01

    Young adults' Ecstasy use trajectories have important implications for individual and population-level consequences of Ecstasy use, but little relevant research has been conducted. This study prospectively examines Ecstasy trajectories in a population-based sample. Data are from the Natural History Study of Drug Use, a retrospective/prospective cohort study conducted in Australia. Population screening identified a probability sample of Ecstasy users aged 19-23 years. Complete data for 30 months of follow-up, comprising 4 time intervals, were available for 297 participants (88.4% of sample). Trajectories were derived using cluster analysis based on recent Ecstasy use at each interval. Trajectory predictors were examined using a generalized ordered logit model and included Ecstasy dependence (World Mental Health Composite International Diagnostic Instrument), psychological distress (Hospital Anxiety Depression Scale), aggression (Young Adult Self Report) and contextual factors (e.g. attendance at electronic/dance music events). Three Ecstasy trajectories were identified (low, intermediate and high use). At its peak, the high-use trajectory involved 1-2 days Ecstasy use per week. Decreasing frequency of use was observed for intermediate and high-use trajectories from 12 months, independently of market factors. Intermediate and high-use trajectory membership was predicted by past Ecstasy consumption (>70 pills) and attendance at electronic/dance music events. High-use trajectory members were unlikely to have used Ecstasy for more than 3 years and tended to report consistently positive subjective effects at baseline. Given the social context and temporal course of Ecstasy use, Ecstasy trajectories might be better understood in terms of instrumental rather than addictive drug use patterns. PMID:23899430

  20. LEWICE droplet trajectory calculations on a parallel computer

    NASA Technical Reports Server (NTRS)

    Caruso, Steven C.

    1993-01-01

    A parallel computer implementation (128 processors) of LEWICE, a NASA Lewis code used to predict the time-dependent ice accretion process for two-dimensional aerodynamic bodies of simple geometries, is described. Two-dimensional parallel droplet trajectory calculations are performed to demonstrate the potential benefits of applying parallel processing to ice accretion analysis. Parallel performance is evaluated as a function of the number of trajectories and the number of processors. For comparison, similar trajectory calculations are performed on single-processor Cray computers, and the best parallel results are found to be 33 and 23 times faster, respectively, than those of the Cray XMP and YMP.

  1. Trajectory Design Tools for Libration and Cis-Lunar Environments

    NASA Technical Reports Server (NTRS)

    Folta, David C.; Webster, Cassandra M.; Bosanac, Natasha; Cox, Andrew; Guzzetti, Davide; Howell, Kathleen C.

    2016-01-01

    Innovative trajectory design tools are required to support challenging multi-body regimes with complex dynamics, uncertain perturbations, and the integration of propulsion influences. Two distinctive tools, Adaptive Trajectory Design and the General Mission Analysis Tool have been developed and certified to provide the astrodynamics community with the ability to design multi-body trajectories. In this paper we discuss the multi-body design process and the capabilities of both tools. Demonstrable applications to confirmed missions, the Lunar IceCube Cubesat lunar mission and the Wide-Field Infrared Survey Telescope (WFIRST) Sun-Earth L2 mission, are presented.

  2. High Altitude Venus Operations Concept Trajectory Design, Modeling and Simulation

    NASA Technical Reports Server (NTRS)

    Lugo, Rafael A.; Ozoroski, Thomas A.; Van Norman, John W.; Arney, Dale C.; Dec, John A.; Jones, Christopher A.; Zumwalt, Carlie H.

    2015-01-01

    A trajectory design and analysis that describes aerocapture, entry, descent, and inflation of manned and unmanned High Altitude Venus Operation Concept (HAVOC) lighter-than-air missions is presented. Mission motivation, concept of operations, and notional entry vehicle designs are presented. The initial trajectory design space is analyzed and discussed before investigating specific trajectories that are deemed representative of a feasible Venus mission. Under the project assumptions, while the high-mass crewed mission will require further research into aerodynamic decelerator technology, it was determined that the unmanned robotic mission is feasible using current technology.

  3. Trajectory Design Analysis over the Lunar Nodal Cycle for the Multi-Purpose Crew Vehicle (MPCV) Exploration Mission 2 (EM-2)

    NASA Technical Reports Server (NTRS)

    Gutkowski, Jeffrey P.; Dawn, Timothy F.; Jedrey, Richard M.

    2014-01-01

    The first crewed mission, Exploration Mission 2 (EM-2), for the MPCV Orion spacecraft is scheduled for August 2021, and its current mission is to orbit the Moon in a highly elliptical lunar orbit for 3 days. A 21-year scan was performed to identify feasible missions that satisfy the propulsive capabilities of the Interim Cryogenic Propulsion Stage (ICPS) and MPCV Service Module (SM). The mission is divided into 4 phases: (1) a lunar free return trajectory, (2) a hybrid maneuver, during the translunar coast, to lower the approach perilune altitude to 100 km, (3) lunar orbit insertion into a 100 x 10,000 km orbit, and (4) lunar orbit loiter and Earth return to a splashdown off the coast of Southern California. Trajectory data was collected for all feasible missions and converted to information that influence different subsystems including propulsion, power, thermal, communications, and mission operations. The complete 21-year scan data shows seasonal effects that are due to the Earth-Moon geometry and the initial Earth parking orbit. The data and information is also useful to identify mission opportunities around the current planned launch date for EM-2.

  4. Find an Orthopaedic Foot and Ankle MD/DO

    MedlinePlus

    ... AOFAS / FootCareMD / Find a Surgeon Find an Orthopaedic Foot & Ankle Surgeon Page Content The Orthopaedic Distinction Who are Orthopaedic Foot & Ankle Surgeons? Orthopaedic foot and ankle surgeons are ...

  5. Four-body trajectory optimization

    NASA Technical Reports Server (NTRS)

    Pu, C. L.; Edelbaum, T. N.

    1973-01-01

    A collection of typical three-body trajectories from the L1 libration point on the sun-earth line to the earth is presented. These trajectories in the sun-earth system are grouped into four distinct families which differ in transfer time and delta V requirements. Curves showing the variations of delta V with respect to transfer time, and typical two and three-impulse primer vector histories, are included. The development of a four-body trajectory optimization program to compute fuel optimal trajectories between the earth and a point in the sun-earth-moon system are also discussed. Methods for generating fuel optimal two-impulse trajectories which originate at the earth or a point in space, and fuel optimal three-impulse trajectories between two points in space, are presented. A brief qualitative comparison of these methods is given. An example of a four-body two-impulse transfer from the Li libration point to the earth is included.

  6. Semi-Automatic Determination of Rockfall Trajectories

    PubMed Central

    Volkwein, Axel; Klette, Johannes

    2014-01-01

    In determining rockfall trajectories in the field, it is essential to calibrate and validate rockfall simulation software. This contribution presents an in situ device and a complementary Local Positioning System (LPS) that allow the determination of parts of the trajectory. An assembly of sensors (herein called rockfall sensor) is installed in the falling block recording the 3D accelerations and rotational velocities. The LPS automatically calculates the position of the block along the slope over time based on Wi-Fi signals emitted from the rockfall sensor. The velocity of the block over time is determined through post-processing. The setup of the rockfall sensor is presented followed by proposed calibration and validation procedures. The performance of the LPS is evaluated by means of different experiments. The results allow for a quality analysis of both the obtained field data and the usability of the rockfall sensor for future/further applications in the field. PMID:25268916

  7. An Effective Approach for Clustering InhA Molecular Dynamics Trajectory Using Substrate-Binding Cavity Features

    PubMed Central

    Ruiz, Duncan D. A.; Norberto de Souza, Osmar

    2015-01-01

    Protein receptor conformations, obtained from molecular dynamics (MD) simulations, have become a promising treatment of its explicit flexibility in molecular docking experiments applied to drug discovery and development. However, incorporating the entire ensemble of MD conformations in docking experiments to screen large candidate compound libraries is currently an unfeasible task. Clustering algorithms have been widely used as a means to reduce such ensembles to a manageable size. Most studies investigate different algorithms using pairwise Root-Mean Square Deviation (RMSD) values for all, or part of the MD conformations. Nevertheless, the RMSD only may not be the most appropriate gauge to cluster conformations when the target receptor has a plastic active site, since they are influenced by changes that occur on other parts of the structure. Hence, we have applied two partitioning methods (k-means and k-medoids) and four agglomerative hierarchical methods (Complete linkage, Ward’s, Unweighted Pair Group Method and Weighted Pair Group Method) to analyze and compare the quality of partitions between a data set composed of properties from an enzyme receptor substrate-binding cavity and two data sets created using different RMSD approaches. Ensembles of representative MD conformations were generated by selecting a medoid of each group from all partitions analyzed. We investigated the performance of our new method for evaluating binding conformation of drug candidates to the InhA enzyme, which were performed by cross-docking experiments between a 20 ns MD trajectory and 20 different ligands. Statistical analyses showed that the novel ensemble, which is represented by only 0.48% of the MD conformations, was able to reproduce 75% of all dynamic behaviors within the binding cavity for the docking experiments performed. Moreover, this new approach not only outperforms the other two RMSD-clustering solutions, but it also shows to be a promising strategy to distill

  8. An Effective Approach for Clustering InhA Molecular Dynamics Trajectory Using Substrate-Binding Cavity Features.

    PubMed

    De Paris, Renata; Quevedo, Christian V; Ruiz, Duncan D A; Norberto de Souza, Osmar

    2015-01-01

    Protein receptor conformations, obtained from molecular dynamics (MD) simulations, have become a promising treatment of its explicit flexibility in molecular docking experiments applied to drug discovery and development. However, incorporating the entire ensemble of MD conformations in docking experiments to screen large candidate compound libraries is currently an unfeasible task. Clustering algorithms have been widely used as a means to reduce such ensembles to a manageable size. Most studies investigate different algorithms using pairwise Root-Mean Square Deviation (RMSD) values for all, or part of the MD conformations. Nevertheless, the RMSD only may not be the most appropriate gauge to cluster conformations when the target receptor has a plastic active site, since they are influenced by changes that occur on other parts of the structure. Hence, we have applied two partitioning methods (k-means and k-medoids) and four agglomerative hierarchical methods (Complete linkage, Ward's, Unweighted Pair Group Method and Weighted Pair Group Method) to analyze and compare the quality of partitions between a data set composed of properties from an enzyme receptor substrate-binding cavity and two data sets created using different RMSD approaches. Ensembles of representative MD conformations were generated by selecting a medoid of each group from all partitions analyzed. We investigated the performance of our new method for evaluating binding conformation of drug candidates to the InhA enzyme, which were performed by cross-docking experiments between a 20 ns MD trajectory and 20 different ligands. Statistical analyses showed that the novel ensemble, which is represented by only 0.48% of the MD conformations, was able to reproduce 75% of all dynamic behaviors within the binding cavity for the docking experiments performed. Moreover, this new approach not only outperforms the other two RMSD-clustering solutions, but it also shows to be a promising strategy to distill

  9. Preserving correlations between trajectories for efficient path sampling.

    PubMed

    Gingrich, Todd R; Geissler, Phillip L

    2015-06-21

    Importance sampling of trajectories has proved a uniquely successful strategy for exploring rare dynamical behaviors of complex systems in an unbiased way. Carrying out this sampling, however, requires an ability to propose changes to dynamical pathways that are substantial, yet sufficiently modest to obtain reasonable acceptance rates. Satisfying this requirement becomes very challenging in the case of long trajectories, due to the characteristic divergences of chaotic dynamics. Here, we examine schemes for addressing this problem, which engineer correlation between a trial trajectory and its reference path, for instance using artificial forces. Our analysis is facilitated by a modern perspective on Markov chain Monte Carlo sampling, inspired by non-equilibrium statistical mechanics, which clarifies the types of sampling strategies that can scale to long trajectories. Viewed in this light, the most promising such strategy guides a trial trajectory by manipulating the sequence of random numbers that advance its stochastic time evolution, as done in a handful of existing methods. In cases where this "noise guidance" synchronizes trajectories effectively, as the Glauber dynamics of a two-dimensional Ising model, we show that efficient path sampling can be achieved for even very long trajectories. PMID:26093547

  10. Preserving correlations between trajectories for efficient path sampling

    SciTech Connect

    Gingrich, Todd R.; Geissler, Phillip L.

    2015-06-21

    Importance sampling of trajectories has proved a uniquely successful strategy for exploring rare dynamical behaviors of complex systems in an unbiased way. Carrying out this sampling, however, requires an ability to propose changes to dynamical pathways that are substantial, yet sufficiently modest to obtain reasonable acceptance rates. Satisfying this requirement becomes very challenging in the case of long trajectories, due to the characteristic divergences of chaotic dynamics. Here, we examine schemes for addressing this problem, which engineer correlation between a trial trajectory and its reference path, for instance using artificial forces. Our analysis is facilitated by a modern perspective on Markov chain Monte Carlo sampling, inspired by non-equilibrium statistical mechanics, which clarifies the types of sampling strategies that can scale to long trajectories. Viewed in this light, the most promising such strategy guides a trial trajectory by manipulating the sequence of random numbers that advance its stochastic time evolution, as done in a handful of existing methods. In cases where this “noise guidance” synchronizes trajectories effectively, as the Glauber dynamics of a two-dimensional Ising model, we show that efficient path sampling can be achieved for even very long trajectories.

  11. Trajectory optimization on multiprocessors - A comparison of three implementation strategies

    NASA Astrophysics Data System (ADS)

    Summerset, Twain K.; Chowkwanyun, Raymond M.

    The optimization of atmospheric flight vehicle trajectories can require the simulation of several thousand individual trajectories. Such a task can be extremely time consuming if simulating each trajectory requires numerically integrating a set of nonlinear differential equations. This traditional approach, which may require many hours' worth of analysis on a time-shared computer facility, is a bottleneck in space mission planning and limits the number of trajectory design options a mission planner can evaluate. To achieve marked reductions in trajectory design solution times, parallel optimization techniques are proposed. In this paper, three strategies for implementing trajectory optimization methods on multiprocessors will be compared. The comparisons will be illustrated through four trajectory design examples. In the first two examples, maximum reentry downrange and crossrange optimal control problems are posed for a generic maneuvering aerodynamic space vehicle. The third example is Troesch's problem, while the fourth example is the classic Brachistochrone problem. Each of the examples are posed as two-point boundary value problems whose solutions can be expressed as the solutions to a set of nonlinear equations.

  12. Developmental Trajectories of Anxiety and Depression in Early Adolescence

    PubMed Central

    McLaughlin, Katie A.; King, Kevin

    2014-01-01

    Adolescence is a period of heightened vulnerability for the onset of internalizing psychopathology. Characterizing developmental patterns of symptom stability, progression, and co-occurrence is important in order to identify adolescents most at risk for persistent problems. We use latent growth curve modeling to characterize developmental trajectories of depressive symptoms and four classes of anxiety symptoms (separation anxiety, social phobia, GAD, and physical anxiety) across early adolescence, prospective associations of depression and anxiety trajectories with one another, and variation in trajectories by gender. A diverse sample of early adolescents (N=1065) was assessed at three time points across a one-year period. All classes of anxiety symptoms declined across the study period and depressive symptoms remained stable. In between-individual analysis, adolescents with high levels of depressive symptoms experienced less decline over time in symptoms of physical, social, and separation anxiety. Consistent associations were observed between depression and anxiety symptom trajectories within-individuals over time, such that adolescents who experienced a higher level of a specific symptom type than would be expected given their overall symptom trajectory were more likely to experience a later deflection from their average trajectory in other symptoms. Within-individual deflections in physical, social, and GAD symptoms predicted later deflections in depressive symptoms, and deflections in depressive symptoms predicted later deflections in separation anxiety and GAD symptoms. Females had higher levels of symptoms than males, but no evidence was found for variation in symptom trajectories or their associations with one another by gender or by age. PMID:24996791

  13. Trajectory Control of Rendezvous with Maneuver Target Spacecraft

    NASA Technical Reports Server (NTRS)

    Zhou, Zhinqiang

    2012-01-01

    In this paper, a nonlinear trajectory control algorithm of rendezvous with maneuvering target spacecraft is presented. The disturbance forces on the chaser and target spacecraft and the thrust forces on the chaser spacecraft are considered in the analysis. The control algorithm developed in this paper uses the relative distance and relative velocity between the target and chaser spacecraft as the inputs. A general formula of reference relative trajectory of the chaser spacecraft to the target spacecraft is developed and applied to four different proximity maneuvers, which are in-track circling, cross-track circling, in-track spiral rendezvous and cross-track spiral rendezvous. The closed-loop differential equations of the proximity relative motion with the control algorithm are derived. It is proven in the paper that the tracking errors between the commanded relative trajectory and the actual relative trajectory are bounded within a constant region determined by the control gains. The prediction of the tracking errors is obtained. Design examples are provided to show the implementation of the control algorithm. The simulation results show that the actual relative trajectory tracks the commanded relative trajectory tightly. The predicted tracking errors match those calculated in the simulation results. The control algorithm developed in this paper can also be applied to interception of maneuver target spacecraft and relative trajectory control of spacecraft formation flying.

  14. Observation of bow shock protons at the lunar orbit. M.S. Thesis; [particle trajectory analysis of solar protons in the lunar atmosphere

    NASA Technical Reports Server (NTRS)

    Benson, J. L.

    1974-01-01

    Protons with energies ranging from about 500 eV to 3,500 eV were observed by the Suprathermal Ion Detector Experiment (SIDE) on both the dusk and dawn sides of the magnetosphere. On each lunation these particles appeared as a rather continuous phenomenon for 3 to 5 days after crossing from the dawn-side magnetosheath into the solar wind and for about 2 days prior to entering the dusk-side magnetosheath. Data from the SIDE and from the Explorer 35 lunar orbiting magnetometer were analyzed and these data indicated that the transverse ion flows observed by the SIDE in the pre and post bow shock crossing regions of the lunar orbit are due to these deviated solar wind particles. A computer model based on drift trajectories for particles leaving the shock was developed and synthetic particle data produced by this model are in good agreement with the observed data.

  15. 75 FR 47203 - Airworthiness Directives; McDonnell Douglas Corporation Model MD-11 and MD-11F Airplanes Equipped...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-08-05

    ... Corporation Model MD- 11 and MD-11F Airplanes Equipped With General Electric CF6-80C2 Series Engines AGENCY..., equipped with General Electric Model CF6-80C2 or CF6-80A series engines. These airplanes have been... partially agree with the commenter's request. We agree that the General Electric (GE) CF6-80C2 series...

  16. Highly constrained entry trajectory generation

    NASA Astrophysics Data System (ADS)

    Xie, Yu; Liu, Luhua; Tang, Guojian; Zheng, Wei

    2013-07-01

    An entry trajectory planning algorithm that generates flyable trajectories satisfying waypoints, no-fly zones, and other path and terminal constraints is presented. The algorithm tactically divides the entry trajectory into the initial and glide phases. In the initial phase, a nominal angle of attack and a constant bank angle are used to generate the 3-D trajectory. In the glide phase, a planner is developed based on the evolved acceleration guidance logic for entry (EAGLE). The planner is divided into a longitudinal sub-planner and a lateral sub-planner. For longitudinal planning, the drag-energy profile is represented as five piecewise linear functions of the normalized non-conventional energy to make it consistent with both the desired trajectory length and the lateral maneuverability required to meet waypoint and no-fly zone constraints. The longitudinal sub-planner determines the magnitude of the bank angle, whereas the lateral sub-planner determines the appropriate sign of the bank angle for passing waypoints, avoiding no-fly zones, and minimizing the final heading error. The longitudinal and lateral sub-planners are iteratively employed until all path and terminal constraints are satisfied. Then, a tracker is employed to follow both the reference drag acceleration and the heading angle profiles to generate a feasible closed-loop entry trajectory. The approach is tested using the Common Aero Vehicle model. Simulations demonstrate that the generated trajectories can pass the predetermined waypoints, avoid no-fly zones, and achieve the desired target conditions within allowable tolerances.

  17. Trajectories in Operating a Handheld Tool

    ERIC Educational Resources Information Center

    Heuer, Herbert; Sulzenbruck, Sandra

    2009-01-01

    The authors studied the trajectories of the hand and of the tip of a handheld sliding first-order lever in aiming movements. With this kind of tool, straight trajectories of the hand are generally associated with curved trajectories of the tip of the lever and vice versa. Trajectories of the tip of the lever exhibited smaller deviations from…

  18. MdSOS2L1 forms a complex with MdMYB1 to control vacuolar pH by transcriptionally regulating MdVHA-B1 in apples.

    PubMed

    Sun, Cui-Hui; Zhang, Quan-Yan; Sun, Mei-Hong; Hu, Da-Gang

    2016-01-01

    Vacuolar pH is important and involves in many different physiological processes in plants. A recent paper published in Plant Physiology reveals that MdMYB1 regulates vacuolar pH by directly transcriptionally regulating proton pump genes and malate transporters genes, such as V-ATPase subunit gene MdVHA-B1. Here, we found that MdSOS2L1 in vitro did not directly interact with MdMYB1, however, in vivo formed a complex with MdMYB1 in the nucleus to regulate MdVHA-B1-mediated vacuolar acidification. This finding shed light on the role of MdSOS2L1 in transcriptionally regulating MdVHA-B1 in addition to its post-modified function in apples. PMID:26910596

  19. Asthma Trajectories in Early Childhood: Identifying Modifiable Factors

    PubMed Central

    Panico, Lidia; Stuart, Beth; Bartley, Mel; Kelly, Yvonne

    2014-01-01

    Background There are conflicting views as to whether childhood wheezing represents several discreet entities or a single but variable disease. Classification has centered on phenotypes often derived using subjective criteria, small samples, and/or with little data for young children. This is particularly problematic as asthmatic features appear to be entrenched by age 6/7. In this paper we aim to: identify longitudinal trajectories of wheeze and other atopic symptoms in early childhood; characterize the resulting trajectories by the socio-economic background of children; and identify potentially modifiable processes in infancy correlated with these trajectories. Data and Methods The Millennium Cohort Study is a large, representative birth cohort of British children born in 2000–2002. Our analytical sample includes 11,632 children with data on key variables (wheeze in the last year; ever hay-fever and/or eczema) reported by the main carers at age 3, 5 and 7 using a validated tool, the International Study of Asthma and Allergies in Childhood module. We employ longitudinal Latent Class Analysis, a clustering methodology which identifies classes underlying the observed population heterogeneity. Results Our model distinguished four latent trajectories: a trajectory with both low levels of wheeze and other atopic symptoms (54% of the sample); a trajectory with low levels of wheeze but high prevalence of other atopic symptoms (29%); a trajectory with high prevalence of both wheeze and other atopic symptoms (9%); and a trajectory with high levels of wheeze but low levels of other atopic symptoms (8%). These groups differed in terms of socio-economic markers and potential intervenable factors, including household damp and breastfeeding initiation. Conclusion Using data-driven techniques, we derived four trajectories of asthmatic symptoms in early childhood in a large, population based sample. These groups differ in terms of their socio-economic profiles. We identified

  20. Local control theory in trajectory-based nonadiabatic dynamics

    SciTech Connect

    Curchod, Basile F. E.; Penfold, Thomas J.; Rothlisberger, Ursula; Tavernelli, Ivano

    2011-10-15

    In this paper, we extend the implementation of nonadiabatic molecular dynamics within the framework of time-dependent density-functional theory in an external field described in Tavernelli et al.[Phys. Rev. A 81, 052508 (2010)] by calculating on-the-fly pulses to control the population transfer between electronic states using local control theory. Using Tully's fewest switches trajectory surface hopping method, we perform MD to control the photoexcitation of LiF and compare the results to quantum dynamics (QD) calculations performed within the Heidelberg multiconfiguration time-dependent Hartree package. We show that this approach is able to calculate a field that controls the population transfer between electronic states. The calculated field is in good agreement with that obtained from QD, and the differences that arise are discussed in detail.

  1. 76 FR 53346 - Airworthiness Directives; The Boeing Company Model DC-9-81 (MD-81), DC-9-82 (MD-82), DC-9-83 (MD...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-08-26

    ... proposed AD affects Model MD-80 series airplanes. We issued AD 2011-01-11, Amendment 39-16565 (76 FR 430... 12866, (2) Is not a ``significant rule'' under the DOT Regulatory Policies and Procedures (44 FR 11034... hinge bearing lugs of the aft face of the center section of the horizontal stabilizer; measuring...

  2. Decomposition of Gene Expression State Space Trajectories

    PubMed Central

    Mar, Jessica C.; Quackenbush, John

    2009-01-01

    Representing and analyzing complex networks remains a roadblock to creating dynamic network models of biological processes and pathways. The study of cell fate transitions can reveal much about the transcriptional regulatory programs that underlie these phenotypic changes and give rise to the coordinated patterns in expression changes that we observe. The application of gene expression state space trajectories to capture cell fate transitions at the genome-wide level is one approach currently used in the literature. In this paper, we analyze the gene expression dataset of Huang et al. (2005) which follows the differentiation of promyelocytes into neutrophil-like cells in the presence of inducers dimethyl sulfoxide and all-trans retinoic acid. Huang et al. (2005) build on the work of Kauffman (2004) who raised the attractor hypothesis, stating that cells exist in an expression landscape and their expression trajectories converge towards attractive sites in this landscape. We propose an alternative interpretation that explains this convergent behavior by recognizing that there are two types of processes participating in these cell fate transitions—core processes that include the specific differentiation pathways of promyelocytes to neutrophils, and transient processes that capture those pathways and responses specific to the inducer. Using functional enrichment analyses, specific biological examples and an analysis of the trajectories and their core and transient components we provide a validation of our hypothesis using the Huang et al. (2005) dataset. PMID:20041215

  3. Academic trajectories of newcomer immigrant youth.

    PubMed

    Suárez-Orozco, Carola; Gaytán, Francisco X; Bang, Hee Jin; Pakes, Juliana; O'Connor, Erin; Rhodes, Jean

    2010-05-01

    Immigration to the United States presents both challenges and opportunities that affect students' academic achievement. Using a 5-year longitudinal, mixed-methods approach, we identified varying academic trajectories of newcomer immigrant students from Central America, China, the Dominican Republic, Haiti, and Mexico. Latent class growth curve analysis revealed that although some newcomer students performed at high or improving levels over time, others showed diminishing performance. Multinomial logistic regressions identified significant group differences in academic trajectories, particularly between the high-achieving youth and the other groups. In keeping with ecological-developmental and stage-environment fit theories, School Characteristics (school segregation rate, school poverty rate, and student perceptions of school violence), Family Characteristics (maternal education, parental employment, and household structure), and Individual Characteristics (academic English proficiency, academic engagement, psychological symptoms, gender, and 2 age-related risk factors, number of school transitions and being overaged for grade placement) were associated with different trajectories of academic performance. A series of case studies triangulate many of the quantitative findings as well as illuminate patterns that were not detected in the quantitative data. Thus, the mixed-methods approach sheds light on the cumulative developmental challenges that immigrant students face as they adjust to their new educational settings.

  4. PoopMD, a Mobile Health Application, Accurately Identifies Infant Acholic Stools

    PubMed Central

    Franciscovich, Amy; Vaidya, Dhananjay; Doyle, Joe; Bolinger, Josh; Capdevila, Montserrat; Rice, Marcus; Hancock, Leslie; Mahr, Tanya; Mogul, Douglas B.

    2015-01-01

    Biliary atresia (BA) is the leading cause of pediatric end-stage liver disease in the United States. Education of parents in the perinatal period with stool cards depicting acholic and normal stools has been associated with improved time-to-diagnosis and survival in BA. PoopMD is a mobile application that utilizes a smartphone’s camera and color recognition software to analyze an infant’s stool and determine if additional follow-up is indicated. PoopMD was developed using custom HTML5/CSS3 and wrapped to work on iOS and Android platforms. In order to define the gold standard regarding stool color, seven pediatricians were asked to review 45 photographs of infant stool and rate them as acholic, normal, or indeterminate. Samples for which 6+ pediatricians demonstrated agreement defined the gold standard, and only these samples were included in the analysis. Accuracy of PoopMD was assessed using an iPhone 5s with incandescent lighting. Variability in analysis of stool photographs as acholic versus normal with intermediate rating weighted as 50% agreement (kappa) was compared between three laypeople and one expert user. Variability in output was also assessed between an iPhone 5s and a Samsung Galaxy S4, as well as between incandescent lighting and compact fluorescent lighting. Six-plus pediatricians agreed on 27 normal and 7 acholic photographs; no photographs were defined as indeterminate. The sensitivity was 7/7 (100%). The specificity was 24/27 (89%) with 3/27 labeled as indeterminate; no photos of normal stool were labeled as acholic. The Laplace-smoothed positive likelihood ratio was 6.44 (95% CI 2.52 to 16.48) and the negative likelihood ratio was 0.13 (95% CI 0.02 to 0.83). kappauser was 0.68, kappaphone was 0.88, and kappalight was 0.81. Therefore, in this pilot study, PoopMD accurately differentiates acholic from normal color with substantial agreement across users, and almost perfect agreement across two popular smartphones and ambient light settings

  5. PoopMD, a Mobile Health Application, Accurately Identifies Infant Acholic Stools.

    PubMed

    Franciscovich, Amy; Vaidya, Dhananjay; Doyle, Joe; Bolinger, Josh; Capdevila, Montserrat; Rice, Marcus; Hancock, Leslie; Mahr, Tanya; Mogul, Douglas B

    2015-01-01

    Biliary atresia (BA) is the leading cause of pediatric end-stage liver disease in the United States. Education of parents in the perinatal period with stool cards depicting acholic and normal stools has been associated with improved time-to-diagnosis and survival in BA. PoopMD is a mobile application that utilizes a smartphone's camera and color recognition software to analyze an infant's stool and determine if additional follow-up is indicated. PoopMD was developed using custom HTML5/CSS3 and wrapped to work on iOS and Android platforms. In order to define the gold standard regarding stool color, seven pediatricians were asked to review 45 photographs of infant stool and rate them as acholic, normal, or indeterminate. Samples for which 6+ pediatricians demonstrated agreement defined the gold standard, and only these samples were included in the analysis. Accuracy of PoopMD was assessed using an iPhone 5s with incandescent lighting. Variability in analysis of stool photographs as acholic versus normal with intermediate rating weighted as 50% agreement (kappa) was compared between three laypeople and one expert user. Variability in output was also assessed between an iPhone 5s and a Samsung Galaxy S4, as well as between incandescent lighting and compact fluorescent lighting. Six-plus pediatricians agreed on 27 normal and 7 acholic photographs; no photographs were defined as indeterminate. The sensitivity was 7/7 (100%). The specificity was 24/27 (89%) with 3/27 labeled as indeterminate; no photos of normal stool were labeled as acholic. The Laplace-smoothed positive likelihood ratio was 6.44 (95% CI 2.52 to 16.48) and the negative likelihood ratio was 0.13 (95% CI 0.02 to 0.83). kappauser was 0.68, kappaphone was 0.88, and kappalight was 0.81. Therefore, in this pilot study, PoopMD accurately differentiates acholic from normal color with substantial agreement across users, and almost perfect agreement across two popular smartphones and ambient light settings. PoopMD

  6. PoopMD, a Mobile Health Application, Accurately Identifies Infant Acholic Stools.

    PubMed

    Franciscovich, Amy; Vaidya, Dhananjay; Doyle, Joe; Bolinger, Josh; Capdevila, Montserrat; Rice, Marcus; Hancock, Leslie; Mahr, Tanya; Mogul, Douglas B

    2015-01-01

    Biliary atresia (BA) is the leading cause of pediatric end-stage liver disease in the United States. Education of parents in the perinatal period with stool cards depicting acholic and normal stools has been associated with improved time-to-diagnosis and survival in BA. PoopMD is a mobile application that utilizes a smartphone's camera and color recognition software to analyze an infant's stool and determine if additional follow-up is indicated. PoopMD was developed using custom HTML5/CSS3 and wrapped to work on iOS and Android platforms. In order to define the gold standard regarding stool color, seven pediatricians were asked to review 45 photographs of infant stool and rate them as acholic, normal, or indeterminate. Samples for which 6+ pediatricians demonstrated agreement defined the gold standard, and only these samples were included in the analysis. Accuracy of PoopMD was assessed using an iPhone 5s with incandescent lighting. Variability in analysis of stool photographs as acholic versus normal with intermediate rating weighted as 50% agreement (kappa) was compared between three laypeople and one expert user. Variability in output was also assessed between an iPhone 5s and a Samsung Galaxy S4, as well as between incandescent lighting and compact fluorescent lighting. Six-plus pediatricians agreed on 27 normal and 7 acholic photographs; no photographs were defined as indeterminate. The sensitivity was 7/7 (100%). The specificity was 24/27 (89%) with 3/27 labeled as indeterminate; no photos of normal stool were labeled as acholic. The Laplace-smoothed positive likelihood ratio was 6.44 (95% CI 2.52 to 16.48) and the negative likelihood ratio was 0.13 (95% CI 0.02 to 0.83). kappauser was 0.68, kappaphone was 0.88, and kappalight was 0.81. Therefore, in this pilot study, PoopMD accurately differentiates acholic from normal color with substantial agreement across users, and almost perfect agreement across two popular smartphones and ambient light settings. PoopMD

  7. Hyper-X Post-Flight Trajectory Reconstruction

    NASA Technical Reports Server (NTRS)

    Karlgaard, Christopher D.; Tartabini, Paul V.; Blanchard, RobertC.; Kirsch, Michael; Toniolo, Matthew D.

    2004-01-01

    This paper discusses the formulation and development of a trajectory reconstruction tool for the NASA X{43A/Hyper{X high speed research vehicle, and its implementation for the reconstruction and analysis of ight test data. Extended Kalman ltering techniques are employed to reconstruct the trajectory of the vehicle, based upon numerical integration of inertial measurement data along with redundant measurements of the vehicle state. The equations of motion are formulated in order to include the effects of several systematic error sources, whose values may also be estimated by the ltering routines. Additionally, smoothing algorithms have been implemented in which the nal value of the state (or an augmented state that includes other systematic error parameters to be estimated) and covariance are propagated back to the initial time to generate the best-estimated trajectory, based upon all available data. The methods are applied to the problem of reconstructing the trajectory of the Hyper-X vehicle from ight data.

  8. Quantum trajectories of superconducting qubits

    NASA Astrophysics Data System (ADS)

    Weber, Steven J.; Murch, Kater W.; Kimchi-Schwartz, Mollie E.; Roch, Nicolas; Siddiqi, Irfan

    2016-08-01

    In this review, we discuss recent experiments that investigate how the quantum sate of a superconducting qubit evolves during measurement. We provide a pedagogical overview of the measurement process, when the qubit is dispersively coupled to a microwave frequency cavity, and the qubit state is encoded in the phase of a microwave tone that probes the cavity. A continuous measurement record is used to reconstruct the individual quantum trajectories of the qubit state, and quantum state tomography is performed to verify that the state has been tracked accurately. Furthermore, we discuss ensembles of trajectories, time-symmetric evolution, two-qubit trajectories, and potential applications in measurement-based quantum error correction. xml:lang="fr"

  9. Rescheduling Child Sexual Trajectories

    ERIC Educational Resources Information Center

    Yuill, Richard

    2008-01-01

    The author comments on Diederik Janssen's essay "ReQueering Queer Youth Development: A Post-Developmental Approach to Childhood and Pedagogy," commenting that Janssen's analysis can inform both both materialist and post-structuralist understandings of children's sexuality by shifting focus from children as fetishized objects or as a group…

  10. Cost trajectories for cancer patients

    PubMed Central

    Wodchis, W.P.; Arthurs, E.; Khan, A.I.; Gandhi, S.; MacKinnon, M.; Sussman, J.

    2016-01-01

    Background Health care spending is known to be highly skewed, with a small subset of the population consuming a disproportionate amount of health care resources. Patients with cancer are high-cost users because of high incremental health care costs for treatment and the growing prevalence of cancer. The objectives of the present study included characterizing cancer-patient trajectories by cost, and identifying the patient and health system characteristics associated with high health system costs after cancer treatment. Methods This retrospective cohort study identified Ontario adults newly diagnosed with cancer between 1 April 2009 and 30 September 2010. Costs of health care use before, during, and after cancer episodes were used to develop trajectories of care. Descriptive analyses examined differences between the trajectories in terms of clinical and health system characteristics, and a logistic regression approach identified predictors of being a high-cost user after a cancer episode. Results Ten trajectories were developed based on whether patients were high- or low-cost users before and after their cancer episode. The most common trajectory represented patients who were low-cost in the year before cancer, survived treatment, and continued to be low-cost in the year after cancer (31.4%); stage ii cancer of the male genital system was the most common diagnosis within that trajectory. Regression analyses identified increases in age and in multimorbidity and low continuity of care as the strongest predictors of high-cost status after cancer. Conclusions Findings highlight an opportunity to proactively identify patients who might transition to high-cost status after cancer treatment and to remediate that transition. PMID:26985150

  11. Trajectory-Based Loads for the Ares I-X Test Flight Vehicle

    NASA Technical Reports Server (NTRS)

    Vause, Roland F.; Starr, Brett R.

    2011-01-01

    In trajectory-based loads, the structural engineer treats each point on the trajectory as a load case. Distributed aero, inertial, and propulsion forces are developed for the structural model which are equivalent to the integrated values of the trajectory model. Free-body diagrams are then used to solve for the internal forces, or loads, that keep the applied aero, inertial, and propulsion forces in dynamic equilibrium. There are several advantages to using trajectory-based loads. First, consistency is maintained between the integrated equilibrium equations of the trajectory analysis and the distributed equilibrium equations of the structural analysis. Second, the structural loads equations are tied to the uncertainty model for the trajectory systems analysis model. Atmosphere, aero, propulsion, mass property, and controls uncertainty models all feed into the dispersions that are generated for the trajectory systems analysis model. Changes in any of these input models will affect structural loads response. The trajectory systems model manages these inputs as well as the output from the structural model over thousands of dispersed cases. Large structural models with hundreds of thousands of degrees of freedom would execute too slowly to be an efficient part of several thousand system analyses. Trajectory-based loads provide a means for the structures discipline to be included in the integrated systems analysis. Successful applications of trajectory-based loads methods for the Ares I-X vehicle are covered in this paper. Preliminary design loads were based on 2000 trajectories using Monte Carlo dispersions. Range safety loads were tied to 8423 malfunction turn trajectories. In addition, active control system loads were based on 2000 preflight trajectories using Monte Carlo dispersions.

  12. Identifying Trajectories of Borderline Personality Features in Adolescence

    PubMed Central

    Haltigan, John D.

    2016-01-01

    Objective: To examine trajectories of adolescent borderline personality (BP) features in a normative-risk cohort (n = 566) of Canadian children assessed at ages 13, 14, 15, and 16 and childhood predictors of trajectory group membership assessed at ages 8, 10, 11, and 12. Method: Data were drawn from the McMaster Teen Study, an on-going study examining relations among bullying, mental health, and academic achievement. Participants and their parents completed a battery of mental health and peer relations questionnaires at each wave of the study. Academic competence was assessed at age 8 (Grade 3). Latent class growth analysis, analysis of variance, and logistic regression were used to analyze the data. Results: Three distinct BP features trajectory groups were identified: elevated or rising, intermediate or stable, and low or stable. Parent- and child-reported mental health symptoms, peer relations risk factors, and intra-individual risk factors were significant predictors of elevated or rising and intermediate or stable trajectory groups. Child-reported attention-deficit hyperactivity disorder (ADHD) and somatization symptoms uniquely predicted elevated or rising trajectory group membership, whereas parent-reported anxiety and child-reported ADHD symptoms uniquely predicted intermediate or stable trajectory group membership. Child-reported somatization symptoms was the only predictor to differentiate the intermediate or stable and elevated or rising trajectory groups (OR 1.15, 95% CI 1.04 to 1.28). Associations between child-reported reactive temperament and elevated BP features trajectory group membership were 10.23 times higher among children who were bullied, supporting a diathesis–stress pathway in the development of BP features for these youth. Conclusions: Findings demonstrate the heterogeneous course of BP features in early adolescence and shed light on the potential prodromal course of later borderline personality disorder. PMID:27254092

  13. Lunar Landing Trajectory Design for Onboard Hazard Detection and Avoidance

    NASA Technical Reports Server (NTRS)

    Paschall, Steve; Brady, Tye; Sostaric, Ron

    2009-01-01

    The Autonomous Landing and Hazard Avoidance Technology (ALHAT) Project is developing the software and hardware technology needed to support a safe and precise landing for the next generation of lunar missions. ALHAT provides this capability through terrain-relative navigation measurements to enhance global-scale precision, an onboard hazard detection system to select safe landing locations, and an Autonomous Guidance, Navigation, and Control (AGNC) capability to process these measurements and safely direct the vehicle to a landing location. This paper focuses on the key trajectory design issues relevant to providing an onboard Hazard Detection and Avoidance (HDA) capability for the lander. Hazard detection can be accomplished by the crew visually scanning the terrain through a window, a sensor system imaging the terrain, or some combination of both. For ALHAT, this hazard detection activity is provided by a sensor system, which either augments the crew s perception or entirely replaces the crew in the case of a robotic landing. Detecting hazards influences the trajectory design by requiring the proper perspective, range to the landing site, and sufficient time to view the terrain. Following this, the trajectory design must provide additional time to process this information and make a decision about where to safely land. During the final part of the HDA process, the trajectory design must provide sufficient margin to enable a hazard avoidance maneuver. In order to demonstrate the effects of these constraints on the landing trajectory, a tradespace of trajectory designs was created for the initial ALHAT Design Analysis Cycle (ALDAC-1) and each case evaluated with these HDA constraints active. The ALHAT analysis process, described in this paper, narrows down this tradespace and subsequently better defines the trajectory design needed to support onboard HDA. Future ALDACs will enhance this trajectory design by balancing these issues and others in an overall system

  14. Cummins MD & HD Accessory Hybridization CRADA -Annual Report FY15

    SciTech Connect

    Deter, Dean D.

    2015-10-01

    There are many areas of MD and HD vehicles that can be improved by new technologies and optimized control strategies. Component optimization and idle reduction need to be addressed, this is best done by a two part approach that includes selecting the best component technology, and/or architecture, and optimized controls that are vehicle focused. While this is a common focus in the light duty industry it has been gaining momentum in the MD and HD market as the market gets more competitive and the regulations become more stringent. When looking into systems optimization and idle reduction technologies, affected vehicle systems must first be considered, and if possible included in the new architecture to get the most benefit out of these new capabilities. Typically, when looking into idle reduction or component optimization for MD/HD, the vehicle s accessories become a prime candidate for electrification or hybridization. While this has already been studied on light duty vehicles (especially on hybrids and electric vehicles) it has not made any head way or market penetration in most MD and HD applications. If hybrids and electric MD and HD vehicles begin to break into the market this would be a necessary step into the ability to make those vehicles successful by allowing for independent, optimized operation separate from the engine.

  15. 76 FR 9965 - Amendment of Class E Airspace and Revocation of Class E Airspace; Easton, MD

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-02-23

    ... surface, and remove Class E airspace designated as an extension to Class D airspace at Easton, MD (75 FR... Class E airspace designated as an extension to Class D surface area, and, therefore, will be removed for... Designated as Surface Areas. * * * * * AEA MD E2 Easton, MD Easton Airport/Newnam Field, MD (Lat. 38...

  16. Apollo/Saturn 5 Postflight Trajectory - SA-513 Skylab 1 Mission. Tracking and Flight Reconstruction

    NASA Technical Reports Server (NTRS)

    1973-01-01

    The postflight trajectory for the Apollo/Saturn V SA-513 Skylab I flight is presented. An analysis is included of the orbital and powered flight trajectories of the launch vehicle, the orbital trajectory of the spent S-II stage, and the free flight impact trajectory of the expended S-IC stage. Launch vehicle trajectory dependent parameters are provided in earth-fixed launch site, launch vehicle navigation, and geographic polar coordinate systems. The time history of the trajectory parameters for the launch vehicle is presented from guidance reference release to the transfer to ATM control. Tables of significant launch vehicle parameters at engine cutoff, stage separation, and workshop orbit insertion are included. Figures of such parameters as altitude, surface and cross range, and the magnitude of total velocity and acceleration as a function of range time for the powered flight trajectory are given.

  17. Apple MdACS6 Regulates Ethylene Biosynthesis During Fruit Development Involving Ethylene-Responsive Factor.

    PubMed

    Li, Tong; Tan, Dongmei; Liu, Zhi; Jiang, Zhongyu; Wei, Yun; Zhang, Lichao; Li, Xinyue; Yuan, Hui; Wang, Aide

    2015-10-01

    Ethylene biosynthesis in plants involves different 1-aminocyclopropane-1-carboxylic acid synthase (ACS) genes. The regulation of each ACS gene during fruit development is unclear. Here, we characterized another apple (Malus×domestica) ACS gene, MdACS6. The transcript of MdACS6 was observed not only in fruits but also in other tissues. During fruit development, MdACS6 was initiated at a much earlier stage, whereas MdACS3a and MdACS1 began to be expressed at 35 d before harvest and immediateley after harvest, respectively. Moreover, the enzyme activity of MdACS6 was significantly lower than that of MdACS3a and MdACS1, accounting for the low ethylene biosynthesis in young fruits. Overexpression of MdACS6 (MdACS6-OE) by transient assay in apple showed enhanced ethylene production, and MdACS3a was induced in MdACS6-OE fruits but not in control fruits. In MdACS6 apple fruits silenced by the virus-induced gene silencing (VIGS) system (MdACS6-AN), neither ethylene production nor MdACS3a transcript was detectable. In order to explore the mechanism through which MdACS3a was induced in MdACS6-OE fruits, we investigated the expression of apple ethylene-responsive factor (ERF) genes. The results showed that the expression of MdERF2 was induced in MdACS6-OE fruits and inhibited in MdACS6-AN fruits. Yeast one-hybrid assay showed that MdERF2 protein could bind to the promoter of MdACS3a. Moreover, down-regulation of MdERF2 in apple flesh callus led to a decrease of MdACS3a expression, demonstrating the regulation of MdERF2 on MdACS3a. The mechanism through which MdACS6 regulates the action of MdACS3a was discussed.

  18. Locomotor Trajectories of Stroke Patients during Oriented Gait and Turning

    PubMed Central

    Van Hamme, Angele; Bensmail, Djamel

    2016-01-01

    Background The Timed Up and Go (TUG) test is widely used to assess locomotion in patients with stroke and is considered to predict the risk of falls. The analysis of locomotor trajectories during the TUG appears pertinent in stroke patients. The aims of this study were i) to analyze locomotor trajectories in patients with stroke during the walking and turning sub-tasks of the TUG, and to compare them with healthy subjects, ii) to determine whether trajectory parameters provide additional information to that provided by the conventional measure (performance time), iii) to compare the trajectory parameters of fallers and non-fallers with stroke and of patients with right and left hemisphere stroke, and iv) to evaluate correlations between trajectory parameters and Berg Balance Scale scores. Methods 29 patients with stroke (mean age 54.2±12.2 years, 18 men, 8 fallers) and 25 healthy subjects (mean age 51.6±8.7 years, 11 men) underwent three-dimensional analysis of the TUG. The trajectory of the center of mass was analyzed by calculation of the global trajectory length, Hausdorff distance and Dynamic Time Warping. The parameters were compared with a reference trajectory during the total task and each sub-task (Go, Turn, Return) of the TUG. Results Values of trajectory parameters were significantly higher for the stroke group during the total TUG and the Go and Turn sub-tasks (p<0.05). Moreover, logistic regression indicated that these parameters better discriminated stroke patients and healthy subjects than the conventional timed performance during the Go sub-task. In addition, fallers were distinguished by higher Dynamic Time Warping during the Go (p<0.05). There were no differences between patients with right and left hemisphere stroke. Discussion and Conclusion The trajectories of the stroke patients were longer and more deviated during the turn and the preceding phase. Trajectory parameters provided additional information to timed performance of this locomotor

  19. Detection of germline BRCA1 mutations by Multiple-Dye Cleavase Fragment Length Polymorphism (MD-CFLP) method

    PubMed Central

    Casadei, S; Cortesi, L; Pensotti, V; Radice, P; Pierotti, M; Amadori, D; Calistri, D

    2001-01-01

    We describe the Multiple-Dye Cleavase Fragment Length Polymorphism (MD-CFLP) method set up for a sensitive and preliminary rapid screening of BRCA1 mutations. We analysed exons 11 and 16, which are known to cover slightly more than 70% of the whole coding region of the gene, subdivided into 4 amplicons and labelled with different fluorescent dUTPs. MD-CFLP was first utilised on a panel of 30 DNA samples in which the presence of single-base substitutions or small deletions/insertions had been previously identified by direct sequencing as gold standard, in order to define the optimal conditions in terms of PCR amplification and temperature of digestion. In a second step, we blindly analysed 21 DNA samples by MD-CFLP to verify its reliability. The sensitivity and specificity of MD-CFLP were both 100% in the first study, and 80% and 94%, respectively, in the blind sample assay. Our results demonstrate the capability of the MD-CFLP method to detect DNA sequence alterations in fragments of more than 1 kb. We conclude that CFLP is a powerful tool in mutational analysis, offering reliable results in a shorter time and at a lower cost than conventional methods, and its potential can be enhanced when internal fluorescent labelling and laser detection are used. © 2001 Cancer Research Campaignhttp://www.bjcancer.com PMID:11556835

  20. CoMD Implementation Suite in Emerging Programming Models

    2014-09-23

    CoMD-Em is a software implementation suite of the CoMD [4] proxy app using different emerging programming models. It is intended to analyze the features and capabilities of novel programming models that could help ensure code and performance portability and scalability across heterogeneous platforms while improving programmer productivity. Another goal is to provide the authors and venders with some meaningful feedback regarding the capabilities and limitations of their models. The actual application is a classical molecularmore » dynamics (MD) simulation using either the Lennard-Jones method (LJ) or the embedded atom method (EAM) for primary particle interaction. The code can be extended to support alternate interaction models. The code is expected ro run on a wide class of heterogeneous hardware configurations like shard/distributed/hybrid memory, GPU's and any other platform supported by the underlying programming model.« less