Membrane curvature at a glance
McMahon, Harvey T.; Boucrot, Emmanuel
2015-01-01
ABSTRACT Membrane curvature is an important parameter in defining the morphology of cells, organelles and local membrane subdomains. Transport intermediates have simpler shapes, being either spheres or tubules. The generation and maintenance of curvature is of central importance for maintaining trafficking and cellular functions. It is possible that local shapes in complex membranes could help to define local subregions. In this Cell Science at a Glance article and accompanying poster, we summarize how generating, sensing and maintaining high local membrane curvature is an active process that is mediated and controlled by specialized proteins using general mechanisms: (i) changes in lipid composition and asymmetry, (ii) partitioning of shaped transmembrane domains of integral membrane proteins or protein or domain crowding, (iii) reversible insertion of hydrophobic protein motifs, (iv) nanoscopic scaffolding by oligomerized hydrophilic protein domains and, finally, (v) macroscopic scaffolding by the cytoskeleton with forces generated by polymerization and by molecular motors. We also summarize some of the discoveries about the functions of membrane curvature, where in addition to providing cell or organelle shape, local curvature can affect processes like membrane scission and fusion as well as protein concentration and enzyme activation on membranes. PMID:25774051
Anisotropic Membrane Curvature Sensing by Amphipathic Peptides
Gómez-Llobregat, Jordi; Elías-Wolff, Federico; Lindén, Martin
2016-01-01
Many proteins and peptides have an intrinsic capacity to sense and induce membrane curvature, and play crucial roles for organizing and remodeling cell membranes. However, the molecular driving forces behind these processes are not well understood. Here, we describe an approach to study curvature sensing by simulating the interactions of single molecules with a buckled lipid bilayer. We analyze three amphipathic antimicrobial peptides, a class of membrane-associated molecules that specifically target and destabilize bacterial membranes, and find qualitatively different sensing characteristics that would be difficult to resolve with other methods. Our findings provide evidence for direction-dependent curvature sensing mechanisms in amphipathic peptides and challenge existing theories of hydrophobic insertion. The buckling approach is generally applicable to a wide range of curvature-sensing molecules, and our results provide strong motivation to develop new experimental methods to track position and orientation of membrane proteins. PMID:26745422
Cholesterol Mediates Membrane Curvature during Fusion Events
NASA Astrophysics Data System (ADS)
Ivankin, Andrey; Kuzmenko, Ivan; Gidalevitz, David
2012-06-01
Biomembranes undergo extensive shape changes as they perform vital cellular functions. The mechanisms by which lipids and proteins control membrane curvature remain unclear. We use x-ray reflectivity, grazing incidence x-ray diffraction, and epifluorescence microscopy to study binding of HIV-1 glycoprotein gp41’s membrane-bending domain to DPPC/cholesterol monolayers of various compositions at the air-liquid interface. The results offer a new insight into how membrane curvature could be regulated by cholesterol during fusion of the viral lipid envelope and the host cell membranes.
Sorting of amphiphile membrane components in curvature and composition gradients
NASA Astrophysics Data System (ADS)
Tian, Aiwei
Phase and shape heterogeneities in biomembranes are of functional importance. However, it is difficult to elucidate the roles membrane heterogeneities play in maintaining cellular function due to the complexity of biomembranes. Therefore, investigations of phase behavior and composition/curvature coupling in lipid and polymer model membranes offer some advantages. In this thesis, phase properties in lipid and polymer giant vesicles were studied. Line tension at the fluid/fluid phase boundary of giant lipid unilamellar vesicles was determined directly by micropipette aspiration, and found to be composition-dependent. Dynamics of calcium-induced domains within polyanionic vesicles subject to chemical stimuli were investigated, which revealed the strength of molecular interaction and suggested applications in triggered delivery. In addition, curvature sorting of lipids and proteins was examined. Lipid membrane tethers were pulled from giant unilamellar vesicles using two micropipettes and a bead. Tether radius can be controlled and measured in this system. By examining fluorescence intensity of labeled molecules as a function of curvature, we found that DiI dyes (lipid analogues with spontaneous curvatures) had no curvature preference down to radii of 10 nm. Theoretical calculation predicted that the distribution of small lipids was dominated by entropy instead of bending energy. However protein Cholera toxin subunit B was efficiently sorted away from the high positive curvature due to its negative spontaneous curvature. Bending stiffness was determined to decrease as curvature increased in homogeneous membranes with ternary lipid mixtures near a critical consulate point, revealing the strong preferential intermolecular interactions of such mixtures. In addition, diffusion controlled domain growth was observed in tethers pulled from phase-separated vesicles, which provides a new dynamic sorting principle for lipids and proteins in curvature gradients.
Intrinsically disordered proteins drive membrane curvature
NASA Astrophysics Data System (ADS)
Busch, David J.; Houser, Justin R.; Hayden, Carl C.; Sherman, Michael B.; Lafer, Eileen M.; Stachowiak, Jeanne C.
2015-07-01
Assembly of highly curved membrane structures is essential to cellular physiology. The prevailing view has been that proteins with curvature-promoting structural motifs, such as wedge-like amphipathic helices and crescent-shaped BAR domains, are required for bending membranes. Here we report that intrinsically disordered domains of the endocytic adaptor proteins, Epsin1 and AP180 are highly potent drivers of membrane curvature. This result is unexpected since intrinsically disordered domains lack a well-defined three-dimensional structure. However, in vitro measurements of membrane curvature and protein diffusivity demonstrate that the large hydrodynamic radii of these domains generate steric pressure that drives membrane bending. When disordered adaptor domains are expressed as transmembrane cargo in mammalian cells, they are excluded from clathrin-coated pits. We propose that a balance of steric pressure on the two surfaces of the membrane drives this exclusion. These results provide quantitative evidence for the influence of steric pressure on the content and assembly of curved cellular membrane structures.
Intrinsically disordered proteins drive membrane curvature
Busch, David J.; Houser, Justin R.; Hayden, Carl C.; Sherman, Michael B.; Lafer, Eileen M.; Stachowiak, Jeanne C.
2015-01-01
Assembly of highly curved membrane structures is essential to cellular physiology. The prevailing view has been that proteins with curvature-promoting structural motifs, such as wedge-like amphipathic helices and crescent-shaped BAR domains, are required for bending membranes. Here we report that intrinsically disordered domains of the endocytic adaptor proteins, Epsin1 and AP180 are highly potent drivers of membrane curvature. This result is unexpected since intrinsically disordered domains lack a well-defined three-dimensional structure. However, in vitro measurements of membrane curvature and protein diffusivity demonstrate that the large hydrodynamic radii of these domains generate steric pressure that drives membrane bending. When disordered adaptor domains are expressed as transmembrane cargo in mammalian cells, they are excluded from clathrin-coated pits. We propose that a balance of steric pressure on the two surfaces of the membrane drives this exclusion. These results provide quantitative evidence for the influence of steric pressure on the content and assembly of curved cellular membrane structures. PMID:26204806
Intrinsically disordered proteins drive membrane curvature.
Busch, David J; Houser, Justin R; Hayden, Carl C; Sherman, Michael B; Lafer, Eileen M; Stachowiak, Jeanne C
2015-07-24
Assembly of highly curved membrane structures is essential to cellular physiology. The prevailing view has been that proteins with curvature-promoting structural motifs, such as wedge-like amphipathic helices and crescent-shaped BAR domains, are required for bending membranes. Here we report that intrinsically disordered domains of the endocytic adaptor proteins, Epsin1 and AP180 are highly potent drivers of membrane curvature. This result is unexpected since intrinsically disordered domains lack a well-defined three-dimensional structure. However, in vitro measurements of membrane curvature and protein diffusivity demonstrate that the large hydrodynamic radii of these domains generate steric pressure that drives membrane bending. When disordered adaptor domains are expressed as transmembrane cargo in mammalian cells, they are excluded from clathrin-coated pits. We propose that a balance of steric pressure on the two surfaces of the membrane drives this exclusion. These results provide quantitative evidence for the influence of steric pressure on the content and assembly of curved cellular membrane structures.
On the curvature effect of thin membranes
NASA Astrophysics Data System (ADS)
Wang, Duo; Jiao, Xiangmin; Conley, Rebecca; Glimm, James
2013-01-01
We investigate the curvature effect of a thin, curved elastic interface that separates two subdomains and exerts a pressure due to a curvature effect. This pressure, which we refer to as interface pressure, is similar to the surface tension in fluid mechanics. It is important in some applications, such as the canopy of parachutes, biological membranes of cells, balloons, airbags, etc., as it partially balances a pressure jump between the two sides of an interface. In this paper, we show that the interface pressure is equal to the trace of the matrix product of the curvature tensor and the Cauchy stress tensor in the tangent plane. We derive the theory for interfaces in both 2-D and 3-D, and present numerical discretizations for computing the quality over triangulated surfaces.
Preference for Curvature: A Historical and Conceptual Framework
Gómez-Puerto, Gerardo; Munar, Enric; Nadal, Marcos
2016-01-01
That people find curved contours and lines more pleasurable than straight ones is a recurrent observation in the aesthetic literature. Although such observation has been tested sporadically throughout the history of scientific psychology, only during the last decade has it been the object of systematic research. Recent studies lend support to the idea that human preference for curved contours is biologically determined. However, it has also been argued that this preference is a cultural phenomenon. In this article, we review the available evidence, together with different attempts to explain the nature of preference for curvature: sensoriomotor-based and valuation-based approaches. We also argue that the lack of a unifying framework and clearly defined concepts might be undermining our efforts towards a better understanding of the nature of preference for curvature. Finally, we point to a series of unresolved matters as the starting point to further develop a consistent research program. PMID:26793092
Transmembrane protein sorting driven by membrane curvature
NASA Astrophysics Data System (ADS)
Strahl, H.; Ronneau, S.; González, B. Solana; Klutsch, D.; Schaffner-Barbero, C.; Hamoen, L. W.
2015-11-01
The intricate structure of prokaryotic and eukaryotic cells depends on the ability to target proteins to specific cellular locations. In most cases, we have a poor understanding of the underlying mechanisms. A typical example is the assembly of bacterial chemoreceptors at cell poles. Here we show that the classical chemoreceptor TlpA of Bacillus subtilis does not localize according to the consensus stochastic nucleation mechanism but accumulates at strongly curved membrane areas generated during cell division. This preference was confirmed by accumulation at non-septal curved membranes. Localization appears to be an intrinsic property of the protein complex and does not rely on chemoreceptor clustering, as was previously shown for Escherichia coli. By constructing specific amino-acid substitutions, we demonstrate that the preference for strongly curved membranes arises from the curved shape of chemoreceptor trimer of dimers. These findings demonstrate that the intrinsic shape of transmembrane proteins can determine their cellular localization.
Curvature-driven lateral segregation of membrane constituents in Golgi cisternae
NASA Astrophysics Data System (ADS)
Derganc, Jure
2007-12-01
Lateral segregation of mobile membrane constituents (e.g. lipids, proteins or membrane domains) into the regions of their preferred curvature relaxes stresses in the membrane. The equilibrium distribution of the constituents in the membrane is thus a balance between the gains in the membrane elastic energy and the segregation-induced loss of entropy. The membrane in the Golgi cisternae is particularly susceptible to the curvature-driven segregation because it possesses two very different curvatures—the highly curved membrane in the cisternal rims and the flat membrane in the cisternal sides. In this work, we calculate the extent of lateral segregation in the Golgi cisternae in the case where the segregation is driven by the Helfrich bending energy. It is assumed that the membrane bending constant and spontaneous curvature depend on the local membrane composition. A simple analytical expression for the extent of the lateral segregation is derived. The results show that the segregation depends on the ratio between the bending constant and the thermal energy, the difference of the preferred curvatures of the constituents and the sizes of the constituents. Applying the model to a typical Golgi cisterna, it was found that entropy can effectively limit the extent of the curvature-driven lateral segregation.
Nanoscale Membrane Curvature detected by Polarized Localization Microscopy
NASA Astrophysics Data System (ADS)
Kelly, Christopher; Maarouf, Abir; Woodward, Xinxin
Nanoscale membrane curvature is a necessary component of countless cellular processes. Here we present Polarized Localization Microscopy (PLM), a super-resolution optical imaging technique that enables the detection of nanoscale membrane curvature with order-of-magnitude improvements over comparable optical techniques. PLM combines the advantages of polarized total internal reflection fluorescence microscopy and fluorescence localization microscopy to reveal single-fluorophore locations and orientations without reducing localization precision by point spread function manipulation. PLM resolved nanoscale membrane curvature of a supported lipid bilayer draped over polystyrene nanoparticles on a glass coverslip, thus creating a model membrane with coexisting flat and curved regions and membrane radii of curvature as small as 20 nm. Further, PLM provides single-molecule trajectories and the aggregation of curvature-inducing proteins with super-resolution to reveal the correlated effects of membrane curvature, dynamics, and molecular sorting. For example, cholera toxin subunit B has been observed to induce nanoscale membrane budding and concentrate at the bud neck. PLM reveals a previously hidden and critical information of membrane topology.
Relationship between peptide membrane curvature generation and bactericidal activities
NASA Astrophysics Data System (ADS)
Schmidt, Nathan; Lee, Michelle; Kuo, David; Ouellette, Andre; Wong, Gerard
2013-03-01
Many amphipathic peptides and amphipathic domains in proteins can restructure biological membranes. Two examples are host defense antimicrobial peptides (AMPs) which disrupt and destabilize the cell membranes of microbes, and apolipoproteins which help stabilize nanoscale lipid aggregates. We use complementary x-ray and bacterial cell assays to elucidate the molecular length scale membrane deformations generated by amphipathic peptides with different structural motifs and relate these deformations to their activities on bacteria. Small angle x-ray scattering is used to study the interactions of model membranes with prototypical AMPs and consensus peptides from the amphipathic domains in apolipoproteins. By characterizing the nanoscale curvature deformations induced by these two distinct classes of membrane restructuring peptides we will discuss the role of amino acid composition on curvature generation. Bactericidal assays are used to access the in vivo activities of different amphipathic peptide motifs in order to understand the relationships between cell viability and membrane curvature generation.
Sculpting membranes: a mechanism of curvature generation by proteins
NASA Astrophysics Data System (ADS)
Campelo, Felix
2010-03-01
A wide spectrum of intracellular processes is dependent on the ability of cells to dynamically regulate membrane shape. Membrane bending by proteins is necessary for the generation of intracellular transport carriers and for the maintenance of otherwise intrinsically unstable regions of high membrane curvature in cell organelles. Understanding the mechanisms by which proteins curve membranes is therefore of primary importance. Crescent shaped N-BAR domains containing amphipathic helices can induce membrane curvature by two mechanisms: the scaffolding mechanism due to the very shape of the BAR dimer, and the hydrophobic insertion mechanism by which small shallow inclusions penetrate the membrane matrix and act as a wedge changing the local membrane curvature. We will focus on this latter mechanism, and study it from a quantitative point of view. We use an elastic model of the lipid bilayer, taking into account the internal strains and stresses generated by the presence of an inclusion. We show that large membrane curvatures found in in vitro experiments can be ascribed to this mechanism, and that shallow insertions are more powerful curvature generators than lipids.
NASA Astrophysics Data System (ADS)
Liu, Jin; Tourdot, Richard; Ramanan, Vyas; Agrawal, Neeraj J.; Radhakrishanan, Ravi
2012-06-01
The membrane-surface migration of curvature-inducing proteins in response to membrane curvature gradients has been investigated using Monte Carlo simulations of a curvilinear membrane model based on the Helfrich Hamiltonian. Consistent with theoretical and experimental data, we find the proteins that generate curvature can also sense the background membrane curvature, wherein they preferentially partition to the high curvature regions. The partitioning strength depends linearly on local membrane curvature and the slope (or the coupling constant) of the partitioning probability versus mean curvature depends on the membrane bending rigidity and instantaneous curvature field caused by different proteins. Our simulation study allows us to quantitatively characterize and identify the important factors affecting the coupling constant (slope), which may be difficult to determine in experiments. Furthermore, the membrane model is used to study budding of vesicles where it is found that in order to stabilize a mature vesicle with a stable 'neck-region' (or stable membrane overhangs), the area (extent) of the intrinsic curvature region needs to exceed a threshold-critical value. The migration and partitioning of curvature-inducing proteins in a budding vesicle with a stable neck (with a characteristic negative value of the Gaussian curvature) is investigated.
Spatial Control of Epsin-induced Clathrin Assembly by Membrane Curvature*♦
Holkar, Sachin S.; Kamerkar, Sukrut C.; Pucadyil, Thomas J.
2015-01-01
Epsins belong to the family of highly conserved clathrin-associated sorting proteins that are indispensable for clathrin-mediated endocytosis, but their precise functions remain unclear. We have developed an assay system of budded supported membrane tubes displaying planar and highly curved membrane surfaces to analyze intrinsic membrane curvature preference shown by clathrin-associated sorting proteins. Using real-time fluorescence microscopy, we find that epsin preferentially partitions to and assembles clathrin on highly curved membrane surfaces. Sorting of epsin to regions of high curvature strictly depends on binding to phosphatidylinositol 4,5-bisphosphate. Fluorescently labeled clathrins rapidly assemble as foci, which in turn cluster epsin, while maintaining tube integrity. Clathrin foci grow in intensity with a typical time constant of ∼75 s, similar to the time scales for coated pit formation seen in cells. Epsin therefore effectively senses membrane curvature to spatially control clathrin assembly. Our results highlight the potential role of membrane curvature in orchestrating the myriad molecular interactions necessary for the success of clathrin-mediated membrane budding. PMID:25837255
Membrane curvature in cell biology: An integration of molecular mechanisms.
Jarsch, Iris K; Daste, Frederic; Gallop, Jennifer L
2016-08-15
Curving biological membranes establishes the complex architecture of the cell and mediates membrane traffic to control flux through subcellular compartments. Common molecular mechanisms for bending membranes are evident in different cell biological contexts across eukaryotic phyla. These mechanisms can be intrinsic to the membrane bilayer (either the lipid or protein components) or can be brought about by extrinsic factors, including the cytoskeleton. Here, we review examples of membrane curvature generation in animals, fungi, and plants. We showcase the molecular mechanisms involved and how they collaborate and go on to highlight contexts of curvature that are exciting areas of future research. Lessons from how membranes are bent in yeast and mammals give hints as to the molecular mechanisms we expect to see used by plants and protists.
Membrane curvature in cell biology: An integration of molecular mechanisms
Daste, Frederic
2016-01-01
Curving biological membranes establishes the complex architecture of the cell and mediates membrane traffic to control flux through subcellular compartments. Common molecular mechanisms for bending membranes are evident in different cell biological contexts across eukaryotic phyla. These mechanisms can be intrinsic to the membrane bilayer (either the lipid or protein components) or can be brought about by extrinsic factors, including the cytoskeleton. Here, we review examples of membrane curvature generation in animals, fungi, and plants. We showcase the molecular mechanisms involved and how they collaborate and go on to highlight contexts of curvature that are exciting areas of future research. Lessons from how membranes are bent in yeast and mammals give hints as to the molecular mechanisms we expect to see used by plants and protists. PMID:27528656
Membrane tension controls the assembly of curvature-generating proteins
NASA Astrophysics Data System (ADS)
Simunovic, Mijo; Voth, Gregory A.
2015-05-01
Proteins containing a Bin/Amphiphysin/Rvs (BAR) domain regulate membrane curvature in the cell. Recent simulations have revealed that BAR proteins assemble into linear aggregates, strongly affecting membrane curvature and its in-plane stress profile. Here, we explore the opposite question: do mechanical properties of the membrane impact protein association? By using coarse-grained molecular dynamics simulations, we show that increased surface tension significantly impacts the dynamics of protein assembly. While tensionless membranes promote a rapid formation of long-living linear aggregates of N-BAR proteins, increase in tension alters the geometry of protein association. At high tension, protein interactions are strongly inhibited. Increasing surface density of proteins leads to a wider range of protein association geometries, promoting the formation of meshes, which can be broken apart with membrane tension. Our work indicates that surface tension may play a key role in recruiting proteins to membrane-remodelling sites in the cell.
Curvature Sorting of Peripheral Proteins on Solid-Supported Wavy Membranes
Hsieh, Wan-Ting; Hsu, Chih-Jung; Capraro, Benjamin R.; Wu, Tingting; Chen, Chi-Mon; Yang, Shu; Baumgart, Tobias
2013-01-01
Cellular membrane deformation and the associated redistribution of membrane-bound proteins are important aspects of membrane function. Current model membrane approaches for studying curvature sensing are limited to positive curvatures, and often require complex and delicate experimental setups. To overcome these challenges, we fabricated a wavy substrate imposing a range of curvatures onto an adhering lipid bilayer membrane. We examined the curvature sorting of several peripheral proteins binding to the wavy membrane and observed them to partition into distinct regions of curvature. Furthermore, single molecule imaging experiments suggested that curvature sensing of proteins on low-curvature substrates requires cooperative interactions. PMID:22881196
Micron-scale plasma membrane curvature is recognized by the septin cytoskeleton
Bridges, Andrew A.; Jentzsch, Maximilian S.; Oakes, Patrick W.; Occhipinti, Patricia
2016-01-01
Cells change shape in response to diverse environmental and developmental conditions, creating topologies with micron-scale features. Although individual proteins can sense nanometer-scale membrane curvature, it is unclear if a cell could also use nanometer-scale components to sense micron-scale contours, such as the cytokinetic furrow and base of neuronal branches. Septins are filament-forming proteins that serve as signaling platforms and are frequently associated with areas of the plasma membrane where there is micron-scale curvature, including the cytokinetic furrow and the base of cell protrusions. We report here that fungal and human septins are able to distinguish between different degrees of micron-scale curvature in cells. By preparing supported lipid bilayers on beads of different curvature, we reconstitute and measure the intrinsic septin curvature preference. We conclude that micron-scale curvature recognition is a fundamental property of the septin cytoskeleton that provides the cell with a mechanism to know its local shape. PMID:27044896
Curvature forces in membrane lipid-protein interactions.
Brown, Michael F
2012-12-11
Membrane biochemists are becoming increasingly aware of the role of lipid-protein interactions in diverse cellular functions. This review describes how conformational changes in membrane proteins, involving folding, stability, and membrane shape transitions, potentially involve elastic remodeling of the lipid bilayer. Evidence suggests that membrane lipids affect proteins through interactions of a relatively long-range nature, extending beyond a single annulus of next-neighbor boundary lipids. It is assumed the distance scale of the forces is large compared to the molecular range of action. Application of the theory of elasticity to flexible soft surfaces derives from classical physics and explains the polymorphism of both detergents and membrane phospholipids. A flexible surface model (FSM) describes the balance of curvature and hydrophobic forces in lipid-protein interactions. Chemically nonspecific properties of the lipid bilayer modulate the conformational energetics of membrane proteins. The new biomembrane model challenges the standard model (the fluid mosaic model) found in biochemistry texts. The idea of a curvature force field based on data first introduced for rhodopsin gives a bridge between theory and experiment. Influences of bilayer thickness, nonlamellar-forming lipids, detergents, and osmotic stress are all explained by the FSM. An increased awareness of curvature forces suggests that research will accelerate as structural biology becomes more closely entwined with the physical chemistry of lipids in explaining membrane structure and function.
Curvature Forces in Membrane Lipid-Protein Interactions
Brown, Michael F.
2012-01-01
Membrane biochemists are becoming increasingly aware of the role of lipid-protein interactions in diverse cellular functions. This review describes how conformational changes of membrane proteins—involving folding, stability, and membrane shape transitions—potentially involve elastic remodeling of the lipid bilayer. Evidence suggests that membrane lipids affect proteins through interactions of a relatively long-range nature, extending beyond a single annulus of next-neighbor boundary lipids. It is assumed the distance scale of the forces is large compared to the molecular range of action. Application of the theory of elasticity to flexible soft surfaces derives from classical physics, and explains the polymorphism of both detergents and membrane phospholipids. A flexible surface model (FSM) describes the balance of curvature and hydrophobic forces in lipid-protein interactions. Chemically nonspecific properties of the lipid bilayer modulate the conformational energetics of membrane proteins. The new biomembrane model challenges the standard model (the fluid mosaic model) found in biochemistry texts. The idea of a curvature force field based on data first introduced for rhodopsin gives a bridge between theory and experiment. Influences of bilayer thickness, nonlamellar-forming lipids, detergents, and osmotic stress are all explained by the FSM. An increased awareness of curvature forces suggests that research will accelerate as structural biology becomes more closely entwined with the physical chemistry of lipids in explaining membrane structure and function. PMID:23163284
Bcl-2 apoptosis proteins, mitochondrial membrane curvature, and cancer
NASA Astrophysics Data System (ADS)
Hwee Lai, Ghee; Schmidt, Nathan; Sanders, Lori; Mishra, Abhijit; Wong, Gerard; Ivashyna, Olena; Christenson, Eric; Schlesinger, Paul; Akabori, Kiyotaka; Santangelo, Christian
2012-02-01
Critical interactions between Bcl-2 family proteins permeabilize the outer mitochondrial membrane, a common decision point early in the intrinsic apoptotic pathway that irreversibly commits the cell to death. However, a unified picture integrating the essential non-passive role of lipid membranes with the contested dynamics of Bcl-2 regulation remains unresolved. Correlating results between synchrotron x-ray diffraction and microscopy in cell-free assays, we report activation of pro-apoptotic Bax induces strong pure negative Gaussian membrane curvature topologically necessary for pore formation and membrane remodeling events. Strikingly, Bcl-xL suppresses not only Bax-induced pore formation, but also membrane remodeling by disparate systems including cell penetrating, antimicrobial or viral fusion peptides, and bacterial toxin, none of which have BH3 allosteric domains to mediate direct binding. We propose a parallel mode of Bcl-2 pore regulation in which Bax and Bcl-xL induce antagonistic and mutually interacting Gaussian membrane curvatures. The universal nature of curvature-mediated interactions allows synergy with direct binding mechanisms, and potentially accounts for the Bcl-2 family modulation of mitochondrial fission/fusion dynamics.
Membrane curvature and its generation by BAR proteins
Mim, Carsten; Unger, Vinzenz M
2012-01-01
Membranes are flexible barriers that surround the cell and its compartments. To execute vital functions such as locomotion or receptor turnover, cells need to control the shapes of their membranes. In part, this control is achieved through membrane-bending proteins, such as the bin/amphiphysin/rvs domain (BAR) proteins. Many open questions remain about the mechanisms by which membrane-bending proteins function. Addressing this shortfall, recent structures of BAR protein:membrane complexes support existing mechanistic models, but also produced novel insights into how BAR-domain proteins sense, stabilize and generate curvature. Here we review these recent findings, focusing on how BAR proteins interact with the membrane, and how the resulting scaffold structures might aid the recruitment of other proteins to the sites where membranes are bent. PMID:23058040
Curvature-mediated interactions between membrane proteins.
Kim, K S; Neu, J; Oster, G
1998-01-01
Membrane proteins can deform the lipid bilayer in which they are embedded. If the bilayer is treated as an elastic medium, then these deformations will generate elastic interactions between the proteins. The interaction between a single pair is repulsive. However, for three or more proteins, we show that there are nonpairwise forces whose magnitude is similar to the pairwise forces. When there are five or more proteins, we show that the nonpairwise forces permit the existence of stable protein aggregates, despite their pairwise repulsions. PMID:9788923
Lipid membrane-mediated attraction between curvature inducing objects
van der Wel, Casper; Vahid, Afshin; Šarić, Anđela; Idema, Timon; Heinrich, Doris; Kraft, Daniela J.
2016-01-01
The interplay of membrane proteins is vital for many biological processes, such as cellular transport, cell division, and signal transduction between nerve cells. Theoretical considerations have led to the idea that the membrane itself mediates protein self-organization in these processes through minimization of membrane curvature energy. Here, we present a combined experimental and numerical study in which we quantify these interactions directly for the first time. In our experimental model system we control the deformation of a lipid membrane by adhering colloidal particles. Using confocal microscopy, we establish that these membrane deformations cause an attractive interaction force leading to reversible binding. The attraction extends over 2.5 times the particle diameter and has a strength of three times the thermal energy (−3.3 kBT). Coarse-grained Monte-Carlo simulations of the system are in excellent agreement with the experimental results and prove that the measured interaction is independent of length scale. Our combined experimental and numerical results reveal membrane curvature as a common physical origin for interactions between any membrane-deforming objects, from nanometre-sized proteins to micrometre-sized particles. PMID:27618764
Lipid membrane-mediated attraction between curvature inducing objects
NASA Astrophysics Data System (ADS)
van der Wel, Casper; Vahid, Afshin; Šarić, Anđela; Idema, Timon; Heinrich, Doris; Kraft, Daniela J.
2016-09-01
The interplay of membrane proteins is vital for many biological processes, such as cellular transport, cell division, and signal transduction between nerve cells. Theoretical considerations have led to the idea that the membrane itself mediates protein self-organization in these processes through minimization of membrane curvature energy. Here, we present a combined experimental and numerical study in which we quantify these interactions directly for the first time. In our experimental model system we control the deformation of a lipid membrane by adhering colloidal particles. Using confocal microscopy, we establish that these membrane deformations cause an attractive interaction force leading to reversible binding. The attraction extends over 2.5 times the particle diameter and has a strength of three times the thermal energy (‑3.3 kBT). Coarse-grained Monte-Carlo simulations of the system are in excellent agreement with the experimental results and prove that the measured interaction is independent of length scale. Our combined experimental and numerical results reveal membrane curvature as a common physical origin for interactions between any membrane-deforming objects, from nanometre-sized proteins to micrometre-sized particles.
The Gaussian curvature elastic energy of intermediates in membrane fusion.
Siegel, David P
2008-12-01
The Gaussian curvature elastic energy contribution to the energy of membrane fusion intermediates has usually been neglected because the Gaussian curvature elastic modulus, kappa, was unknown. It is now possible to measure kappa for phospholipids that form bicontinuous inverted cubic (Q(II)) phases. Here, it is shown that one can estimate kappa for lipids that do not form Q(II) phases by studying the phase behavior of lipid mixtures. The method is used to estimate kappa for several lipid compositions in excess water. The values of kappa are used to compute the curvature elastic energies of stalks and catenoidal fusion pores according to recent models. The Gaussian curvature elastic contribution is positive and similar in magnitude to the bending energy contribution: it increases the total curvature energy of all the fusion intermediates by 100 units of k(B)T or more. It is important to note that this contribution makes the predicted intermediate energies compatible with observed lipid phase behavior in excess water. An order-of-magnitude fusion rate equation is used to estimate whether the predicted stalk energies are consistent with the observed rates of stalk-mediated processes in pure lipid systems. The current theory predicts a stalk energy that is slightly too large, by approximately 30 k(B)T, to rationalize the observed rates of stalk-mediated processes in phosphatidylethanolamine or N-monomethylated dioleoylphosphatidylethanolamine systems. Despite this discrepancy, the results show that models of fusion intermediate energy are accurate enough to make semiquantitative predictions about how proteins mediate biomembrane fusion. The same rate model shows that for proteins to drive biomembrane fusion at observed rates, they have to perform mediating functions corresponding to a reduction in the energy of a purely lipidic stalk by several tens of k(B)T. By binding particular peptide sequences to the monolayer surface, proteins could lower fusion intermediate
How curvature-generating proteins build scaffolds on membrane nanotubes
Evergren, Emma; Golushko, Ivan; Prévost, Coline; Renard, Henri-François; Johannes, Ludger; McMahon, Harvey T.; Lorman, Vladimir; Voth, Gregory A.; Bassereau, Patricia
2016-01-01
Bin/Amphiphysin/Rvs (BAR) domain proteins control the curvature of lipid membranes in endocytosis, trafficking, cell motility, the formation of complex subcellular structures, and many other cellular phenomena. They form 3D assemblies that act as molecular scaffolds to reshape the membrane and alter its mechanical properties. It is unknown, however, how a protein scaffold forms and how BAR domains interact in these assemblies at protein densities relevant for a cell. In this work, we use various experimental, theoretical, and simulation approaches to explore how BAR proteins organize to form a scaffold on a membrane nanotube. By combining quantitative microscopy with analytical modeling, we demonstrate that a highly curving BAR protein endophilin nucleates its scaffolds at the ends of a membrane tube, contrary to a weaker curving protein centaurin, which binds evenly along the tube’s length. Our work implies that the nature of local protein–membrane interactions can affect the specific localization of proteins on membrane-remodeling sites. Furthermore, we show that amphipathic helices are dispensable in forming protein scaffolds. Finally, we explore a possible molecular structure of a BAR-domain scaffold using coarse-grained molecular dynamics simulations. Together with fluorescence microscopy, the simulations show that proteins need only to cover 30–40% of a tube’s surface to form a rigid assembly. Our work provides mechanical and structural insights into the way BAR proteins may sculpt the membrane as a high-order cooperative assembly in important biological processes. PMID:27655892
Bhatia, Vikram Kjøller; Hatzakis, Nikos S; Stamou, Dimitrios
2010-06-01
The discovery of proteins that recognize membrane curvature created a paradigm shift by suggesting that membrane shape may act as a cue for protein localization that is independent of lipid or protein composition. Here we review recent data on membrane curvature sensing by three structurally unrelated motifs: BAR domains, amphipathic helices and membrane-anchored proteins. We discuss the conclusion that the curvature of the BAR dimer is not responsible for sensing and that the sensing properties of all three motifs can be rationalized by the physicochemical properties of the curved membrane itself. We thus anticipate that membrane curvature will promote the redistribution of proteins that are anchored in membranes through any type of hydrophobic moiety, a thesis that broadens tremendously the implications of membrane curvature for protein sorting, trafficking and signaling in cell biology.
Thermodynamics and mechanics of membrane curvature generation and sensing by proteins and lipids.
Baumgart, Tobias; Capraro, Benjamin R; Zhu, Chen; Das, Sovan L
2011-01-01
Research investigating lipid membrane curvature generation and sensing is a rapidly developing frontier in membrane physical chemistry and biophysics. The fast recent progress is based on the discovery of a plethora of proteins involved in coupling membrane shape to cellular membrane function, the design of new quantitative experimental techniques to study aspects of membrane curvature, and the development of analytical theories and simulation techniques that allow a mechanistic interpretation of quantitative measurements. The present review first provides an overview of important classes of membrane proteins for which function is coupled to membrane curvature. We then survey several mechanisms that are assumed to underlie membrane curvature sensing and generation. Finally, we discuss relatively simple thermodynamic/mechanical models that allow quantitative interpretation of experimental observations.
IRSp53 senses negative membrane curvature and phase separates along membrane tubules
Prévost, Coline; Zhao, Hongxia; Manzi, John; Lemichez, Emmanuel; Lappalainen, Pekka; Callan-Jones, Andrew; Bassereau, Patricia
2015-01-01
BAR domain proteins contribute to membrane deformation in diverse cellular processes. The inverted-BAR (I-BAR) protein IRSp53, for instance, is found on the inner leaflet of the tubular membrane of filopodia; however its role in the formation of these structures is incompletely understood. Here we develop an original assay in which proteins are encapsulated in giant unilamellar vesicles connected to membrane nanotubes. Our results demonstrate that I-BAR dimers sense negative membrane curvature. Experiment and theory reveal that the I-BAR displays a non-monotonic sorting with curvature, and expands the tube at high imposed tension while constricting it at low tension. Strikingly, at low protein density and tension, protein-rich domains appear along the tube. This peculiar behaviour is due to the shallow intrinsic curvature of I-BAR dimers. It allows constriction of weakly curved membranes coupled to local protein enrichment at biologically relevant conditions. This might explain how IRSp53 contributes in vivo to the initiation of filopodia. PMID:26469246
Spontaneous Behaviors and Wall-Curvature Lead to Apparent Wall Preference in Planarian.
Akiyama, Yoshitaro; Agata, Kiyokazu; Inoue, Takeshi
2015-01-01
The planarian Dugesia japonica tends to stay near the walls of its breeding containers and experimental dishes in the laboratory, a phenomenon called "wall preference". This behavior is thought to be important for environmental adaptation, such as hiding by planarians in nature. However, the mechanisms regulating wall-preference behavior are not well understood, since this behavior occurs in the absence of any particular stimulation. Here we show the mechanisms of wall-preference behavior. Surprisingly, planarian wall-preference behavior was also shown even by the head alone and by headless planarians. These results indicate that planarian "wall-preference" behavior only appears to be a "preference" behavior, and is actually an outcome of spontaneous behaviors, rather than of brain function. We found that in the absence of environmental cues planarians moved basically straight ahead until they reached a wall, and that after reaching a wall, they changed their direction of movement to one tangential to the wall, suggesting that this spontaneous behavior may play a critical role in the wall preference. When we tested another spontaneous behavior, the wigwag movement of the planarian head, using computer simulation with various wigwag angles and wigwag intervals, large wigwag angle and short wigwag interval reduced wall-preference behavior. This indicated that wigwag movement may determine the probability of staying near the wall or leaving the wall. Furthermore, in accord with this simulation, when we tested planarian wall-preference behavior using several assay fields with different curvature of the wall, we found that concavity and sharp curvature of walls negatively impacted wall preference by affecting the permissible angle of the wigwag movement. Together, these results indicate that planarian wall preference may be involuntarily caused by the combination of two spontaneous planarian behaviors: moving straight ahead until reaching a wall and then moving along it
Schmidt, Nathan W.; Wong, Gerard C. L.
2013-01-01
Short cationic, amphipathic antimicrobial peptides are multi-functional molecules that have roles in host defense as direct microbicides and modulators of the immune response. While a general mechanism of microbicidal activity involves the selective disruption and permeabilization of cell membranes, the relationships between peptide sequence and membrane activity are still under investigation. Here, we review the diverse functions that AMPs collectively have in host defense, and show that these functions can be multiplexed with a membrane mechanism of activity derived from the generation of negative Gaussian membrane curvature. As AMPs preferentially generate this curvature in model bacterial cell membranes, the selective generation of negative Gaussian curvature provides AMPs with a broad mechanism to target microbial membranes. The amino acid constraints placed on AMPs by the geometric requirement to induce negative Gaussian curvature are consistent with known AMP sequences. This ‘saddle-splay curvature selection rule’ is not strongly restrictive so AMPs have significant compositional freedom to multiplex membrane activity with other useful functions. The observation that certain proteins involved in cellular processes which require negative Gaussian curvature contain domains with similar motifs as AMPs, suggests this rule may be applicable to other curvature-generating proteins. Since our saddle-splay curvature design rule is based upon both a mechanism of activity and the existing motifs of natural AMPs, we believe it will assist the development of synthetic antimicrobials. PMID:24778573
Aggregation and vesiculation of membrane proteins by curvature-mediated interactions
NASA Astrophysics Data System (ADS)
Reynwar, Benedict J.; Illya, Gregoria; Harmandaris, Vagelis A.; Müller, Martin M.; Kremer, Kurt; Deserno, Markus
2007-05-01
Membrane remodelling plays an important role in cellular tasks such as endocytosis, vesiculation and protein sorting, and in the biogenesis of organelles such as the endoplasmic reticulum or the Golgi apparatus. It is well established that the remodelling process is aided by specialized proteins that can sense as well as create membrane curvature, and trigger tubulation when added to synthetic liposomes. Because the energy needed for such large-scale changes in membrane geometry significantly exceeds the binding energy between individual proteins and between protein and membrane, cooperative action is essential. It has recently been suggested that curvature-mediated attractive interactions could aid cooperation and complement the effects of specific binding events on membrane remodelling. But it is difficult to experimentally isolate curvature-mediated interactions from direct attractions between proteins. Moreover, approximate theories predict repulsion between isotropically curving proteins. Here we use coarse-grained membrane simulations to show that curvature-inducing model proteins adsorbed on lipid bilayer membranes can experience attractive interactions that arise purely as a result of membrane curvature. We find that once a minimal local bending is realized, the effect robustly drives protein cluster formation and subsequent transformation into vesicles with radii that correlate with the local curvature imprint. Owing to its universal nature, curvature-mediated attraction can operate even between proteins lacking any specific interactions, such as newly synthesized and still immature membrane proteins in the endoplasmic reticulum.
Kegulian, Natalie C.; Sankhagowit, Shalene; Apostolidou, Melania; Jayasinghe, Sajith A.; Malmstadt, Noah; Butler, Peter C.; Langen, Ralf
2015-01-01
Islet amyloid polypeptide (IAPP) is a 37-amino acid amyloid protein intimately associated with pancreatic islet β-cell dysfunction and death in type II diabetes. In this study, we combine spectroscopic methods and microscopy to investigate α-helical IAPP-membrane interactions. Using light scattering and fluorescence microscopy, we observe that larger vesicles become smaller upon treatment with human or rat IAPP. Electron microscopy shows the formation of various highly curved structures such as tubules or smaller vesicles in a membrane-remodeling process, and spectrofluorometric detection of vesicle leakage shows disruption of membrane integrity. This effect is stronger for human IAPP than for the less toxic rat IAPP. From CD spectra in the presence of different-sized vesicles, we also uncover the membrane curvature-sensing ability of IAPP and find that it transitions from inducing to sensing membrane curvature when lipid negative charge is decreased. Our in vivo EM images of immunogold-labeled rat IAPP and human IAPP show both forms to localize to mitochondrial cristae, which contain not only locally curved membranes but also phosphatidylethanolamine and cardiolipin, lipids with high spontaneous negative curvature. Disruption of membrane integrity by induction of membrane curvature could apply more broadly to other amyloid proteins and be responsible for membrane damage observed in other amyloid diseases as well. PMID:26283787
Single Lipid Molecule Dynamics on Supported Lipid Bilayers with Membrane Curvature
Cheney, Philip P.; Weisgerber, Alan W.; Feuerbach, Alec M.; Knowles, Michelle K.
2017-01-01
The plasma membrane is a highly compartmentalized, dynamic material and this organization is essential for a wide variety of cellular processes. Nanoscale domains allow proteins to organize for cell signaling, endo- and exocytosis, and other essential processes. Even in the absence of proteins, lipids have the ability to organize into domains as a result of a variety of chemical and physical interactions. One feature of membranes that affects lipid domain formation is membrane curvature. To directly test the role of curvature in lipid sorting, we measured the accumulation of two similar lipids, 1,2-Dihexadecanoyl-sn-glycero-3-phosphoethanolamine (DHPE) and hexadecanoic acid (HDA), using a supported lipid bilayer that was assembled over a nanopatterned surface to obtain regions of membrane curvature. Both lipids studied contain 16 carbon, saturated tails and a head group tag for fluorescence microscopy measurements. The accumulation of lipids at curvatures ranging from 28 nm to 55 nm radii was measured and fluorescein labeled DHPE accumulated more than fluorescein labeled HDA at regions of membrane curvature. We then tested whether single biotinylated DHPE molecules sense curvature using single particle tracking methods. Similar to groups of fluorescein labeled DHPE accumulating at curvature, the dynamics of single molecules of biotinylated DHPE was also affected by membrane curvature and highly confined motion was observed. PMID:28294967
Measuring the composition-curvature coupling in binary lipid membranes by computer simulations
Barragán Vidal, I. A. Müller, M.; Rosetti, C. M.; Pastorino, C.
2014-11-21
The coupling between local composition fluctuations in binary lipid membranes and curvature affects the lateral membrane structure. We propose an efficient method to compute the composition-curvature coupling in molecular simulations and apply it to two coarse-grained membrane models—a minimal, implicit-solvent model and the MARTINI model. Both the weak-curvature behavior that is typical for thermal fluctuations of planar bilayer membranes as well as the strong-curvature regime corresponding to narrow cylindrical membrane tubes are studied by molecular dynamics simulation. The simulation results are analyzed by using a phenomenological model of the thermodynamics of curved, mixed bilayer membranes that accounts for the change of the monolayer area upon bending. Additionally the role of thermodynamic characteristics such as the incompatibility between the two lipid species and asymmetry of composition are investigated.
Spontaneous Behaviors and Wall-Curvature Lead to Apparent Wall Preference in Planarian
Akiyama, Yoshitaro; Agata, Kiyokazu; Inoue, Takeshi
2015-01-01
The planarian Dugesia japonica tends to stay near the walls of its breeding containers and experimental dishes in the laboratory, a phenomenon called “wall preference”. This behavior is thought to be important for environmental adaptation, such as hiding by planarians in nature. However, the mechanisms regulating wall-preference behavior are not well understood, since this behavior occurs in the absence of any particular stimulation. Here we show the mechanisms of wall-preference behavior. Surprisingly, planarian wall-preference behavior was also shown even by the head alone and by headless planarians. These results indicate that planarian “wall-preference” behavior only appears to be a “preference” behavior, and is actually an outcome of spontaneous behaviors, rather than of brain function. We found that in the absence of environmental cues planarians moved basically straight ahead until they reached a wall, and that after reaching a wall, they changed their direction of movement to one tangential to the wall, suggesting that this spontaneous behavior may play a critical role in the wall preference. When we tested another spontaneous behavior, the wigwag movement of the planarian head, using computer simulation with various wigwag angles and wigwag intervals, large wigwag angle and short wigwag interval reduced wall-preference behavior. This indicated that wigwag movement may determine the probability of staying near the wall or leaving the wall. Furthermore, in accord with this simulation, when we tested planarian wall-preference behavior using several assay fields with different curvature of the wall, we found that concavity and sharp curvature of walls negatively impacted wall preference by affecting the permissible angle of the wigwag movement. Together, these results indicate that planarian wall preference may be involuntarily caused by the combination of two spontaneous planarian behaviors: moving straight ahead until reaching a wall and then
Ho, Ruoya; Stroupe, Christopher
2016-10-01
Membrane tethering is a physical association of two membranes before their fusion. Many membrane tethering factors have been identified, but the interactions that mediate inter-membrane associations remain largely a matter of conjecture. Previously, we reported that the homotypic fusion and protein sorting/Class C vacuolar protein sorting (HOPS/Class C Vps) complex, which has two binding sites for the yeast vacuolar Rab GTPase Ypt7p, can tether two low-curvature liposomes when both membranes bear Ypt7p. Here, we show that HOPS tethers highly curved liposomes to Ypt7p-bearing low-curvature liposomes even when the high-curvature liposomes are protein-free. Phosphorylation of the curvature-sensing amphipathic lipid-packing sensor (ALPS) motif from the Vps41p HOPS subunit abrogates tethering of high-curvature liposomes. A HOPS complex without its Vps39p subunit, which contains one of the Ypt7p binding sites in HOPS, lacks tethering activity, though it binds high-curvature liposomes and Ypt7p-bearing low-curvature liposomes. Thus, HOPS tethers highly curved membranes via a direct protein-membrane interaction. Such high-curvature membranes are found at the sites of vacuole tethering and fusion. There, vacuole membranes bend sharply, generating large areas of vacuole-vacuole contact. We propose that HOPS localizes via the Vps41p ALPS motif to these high-curvature regions. There, HOPS binds via Vps39p to Ypt7p in an apposed vacuole membrane.
Membrane Curvature Sensing by Amphipathic Helices Is Modulated by the Surrounding Protein Backbone
Doucet, Christine M.; Esmery, Nina; de Saint-Jean, Maud; Antonny, Bruno
2015-01-01
Membrane curvature is involved in numerous biological pathways like vesicle trafficking, endocytosis or nuclear pore complex assembly. In addition to its topological role, membrane curvature is sensed by specific proteins, enabling the coordination of biological processes in space and time. Amongst membrane curvature sensors are the ALPS (Amphipathic Lipid Packing Sensors). ALPS motifs are short peptides with peculiar amphipathic properties. They are found in proteins targeted to distinct curved membranes, mostly in the early secretory pathway. For instance, the ALPS motif of the golgin GMAP210 binds trafficking vesicles, while the ALPS motif of Nup133 targets nuclear pores. It is not clear if, besides curvature sensitivity, ALPS motifs also provide target specificity, or if other domains in the surrounding protein backbone are involved. To elucidate this aspect, we studied the subcellular localization of ALPS motifs outside their natural protein context. The ALPS motifs of GMAP210 or Nup133 were grafted on artificial fluorescent probes. Importantly, ALPS motifs are held in different positions and these contrasting architectures were mimicked by the fluorescent probes. The resulting chimeras recapitulated the original proteins localization, indicating that ALPS motifs are sufficient to specifically localize proteins. Modulating the electrostatic or hydrophobic content of Nup133 ALPS motif modified its avidity for cellular membranes but did not change its organelle targeting properties. In contrast, the structure of the backbone surrounding the helix strongly influenced targeting. In particular, introducing an artificial coiled-coil between ALPS and the fluorescent protein increased membrane curvature sensitivity. This coiled-coil domain also provided membrane curvature sensitivity to the amphipathic helix of Sar1. The degree of curvature sensitivity within the coiled-coil context remains correlated to the natural curvature sensitivity of the helices. This suggests
Madsen, K L; Bhatia, V K; Gether, U; Stamou, D
2010-05-03
The internal membranes of eukaryotic cells are all twists and bends characterized by high curvature. During recent years it has become clear that specific proteins sustain these curvatures while others simply recognize membrane shape and use it as "molecular information" to organize cellular processes in space and time. Here we discuss this new important recognition process termed membrane curvature sensing (MCS). First, we review a new fluorescence-based experimental method that allows characterization of MCS using measurements on single vesicles and compare it to sensing assays that use bulk/ensemble liposome samples of different mean diameter. Next, we describe two different MCS protein motifs (amphipathic helices and BAR domains) and suggest that in both cases curvature sensitive membrane binding results from asymmetric insertion of hydrophobic amino acids in the lipid membrane. This mechanism can be extended to include the insertion of alkyl chain in the lipid membrane and consequently palmitoylated and myristoylated proteins are predicted to display similar curvature sensitive binding. Surprisingly, in all the aforementioned cases, MCS is predominantly mediated by a higher density of binding sites on curved membranes instead of higher affinity as assumed so far. Finally, we integrate these new insights into the debate about which motifs are involved in sensing versus induction of membrane curvature and what role MCS proteins may play in biology.
Curvature sensing MARCKS-ED peptides bind to membranes in a stereo-independent manner.
Yan, Lei; de Jesus, Armando Jerome; Tamura, Ryo; Li, Victoria; Cheng, Kui; Yin, Hang
2015-07-01
Membrane curvature and lipid composition plays a critical role in interchanging of matter and energy in cells. Peptide curvature sensors are known to activate signaling pathways and promote molecular transport across cell membranes. Recently, the 25-mer MARCKS-ED peptide, which is derived from the effector domain of the myristoylated alanine-rich C kinase substrate protein, has been reported to selectively recognize highly curved membrane surfaces. Our previous studies indicated that the naturally occurring L-MARCKS-ED peptide could simultaneously detect both phosphatidylserine and curvature. Here, we demonstrate that D-MARCKS-ED, composed by unnatural D-amino acids, has the same activities as its enantiomer, L-MARCKS-ED, as a curvature and lipid sensor. An atomistic molecular dynamics simulation suggests that D-MARCKS-ED may change from linear to a boat conformation upon binding to the membrane. Comparable enhancement of fluorescence intensity was observed between D- and L-MARCKS-ED peptides, indicating similar binding affinities. Meanwhile, circular dichroism spectra of D- and L-MARCKS-ED are almost symmetrical both in the presence and absence of liposomes. These results suggest similar behavior of artificial D- and natural L-MARCKS-ED peptides when binding to curved membranes. Our studies may contribute to further understanding of how MARCKS-ED senses membrane curvature as well as provide a new direction to develop novel membrane curvature probes.
When physics takes over: BAR proteins and membrane curvature
Simunovic, Mijo; Voth, Gregory A.; Callan-Jones, Andrew; Bassereau, Patricia
2016-01-01
Cell membranes become highly curved during membrane trafficking, cytokinesis, infection, immune response or cell motion. Bin/amphiphysin/Rvs (BAR) domain proteins with their intrinsically curved and anisotropic shape are involved in many of these processes, but with a large spectrum of modes of action. In vitro experiments and multiscale computer simulations have contributed in identifying a minimal set of physical parameters, namely protein density on the membrane, membrane tension, and membrane shape, that control how bound BAR domain proteins behave on the membrane. In this review, we summarize the multifaceted coupling of BAR proteins to membrane mechanics and propose a simple phase diagram that recapitulates the effects of these parameters. PMID:26519988
Curvature sorting of proteins on a cylindrical lipid membrane tether connected to a reservoir
NASA Astrophysics Data System (ADS)
Singh, Pankaj; Mahata, Paritosh; Baumgart, Tobias; Das, Sovan Lal
2012-05-01
Membrane curvature of a biological cell is actively involved in various fundamental cell biological functions. It has been discovered that membrane curvature and binding of peripheral membrane proteins follow a symbiotic relationship. The exact mechanism behind this interplay of protein binding and membrane curvature has not yet been properly understood. To improve understanding of the mechanism, we study curvature sorting of proteins in a model system consisting of a tether pulled from a giant unilamellar vesicle using mechanical-thermodynamic models. The concentration of proteins bound to the membrane changes significantly due to curvature. This has also been observed in experiments by other researchers. We also find that there is a phase transition based on protein concentration and we discuss the coexistence of phases and stability of solutions. Furthermore, when sorting is favorable, the increase in protein concentration stabilizes the tether in the sense that less pulling force is required to maintain the tether. A similar mechanism may be in place, when motor proteins pull tethers from donor membranes.
Tarahovsky, Yury S.; Koynova, Rumiana; MacDonald, Robert C.
2004-01-01
DNA release from lipoplexes is an essential step during lipofection and is probably a result of charge neutralization by cellular anionic lipids. As a model system to test this possibility, fluorescence resonance energy transfer between DNA and lipid covalently labeled with Cy3 and BODIPY, respectively, was used to monitor the release of DNA from lipid surfaces induced by anionic liposomes. The separation of DNA from lipid measured this way was considerably slower and less complete than that estimated with noncovalently labeled DNA, and depends on the lipid composition of both lipoplexes and anionic liposomes. This result was confirmed by centrifugal separation of released DNA and lipid. X-ray diffraction revealed a clear correlation of the DNA release capacity of the anionic lipids with the interfacial curvature of the mesomorphic structures developed when the anionic and cationic liposomes were mixed. DNA release also correlated with the rate of fusion of anionic liposomes with lipoplexes. It is concluded that the tendency to fuse and the phase preference of the mixed lipid membranes are key factors for the rate and extent of DNA release. The approach presented emphasizes the importance of the lipid composition of both lipoplexes and target membranes and suggests optimal transfection may be obtained by tailoring lipoplex composition to the lipid composition of target cells. PMID:15298910
Curvature–undulation coupling as a basis for curvature sensing and generation in bilayer membranes
Bradley, Ryan P.; Radhakrishnan, Ravi
2016-01-01
We present coarse-grained molecular dynamics simulations of the epsin N-terminal homology domain interacting with a lipid bilayer and demonstrate a rigorous theoretical formalism and analysis method for computing the induced curvature field in varying concentrations of the protein in the dilute limit. Our theory is based on the description of the height–height undulation spectrum in the presence of a curvature field. We formulated an objective function to compare the acquired undulation spectrum from the simulations to that of the theory. We recover the curvature field parameters by minimizing the objective function even in the limit where the protein-induced membrane curvature is of the same order as the amplitude due to thermal undulations. The coupling between curvature and undulations leads to significant predictions: (i) Under dilute conditions, the proteins can sense a site of spontaneous curvature at distances much larger than their size; (ii) as the density of proteins increases the coupling focuses and stabilizes the curvature field to the site of the proteins; and (iii) the mapping of the protein localization and the induction of a stable curvature is a cooperative process that can be described through a Hill function. PMID:27531962
SARS-CoV fusion peptides induce membrane surface ordering and curvature.
Basso, Luis G M; Vicente, Eduardo F; Crusca, Edson; Cilli, Eduardo M; Costa-Filho, Antonio J
2016-11-28
Viral membrane fusion is an orchestrated process triggered by membrane-anchored viral fusion glycoproteins. The S2 subunit of the spike glycoprotein from severe acute respiratory syndrome (SARS) coronavirus (CoV) contains internal domains called fusion peptides (FP) that play essential roles in virus entry. Although membrane fusion has been broadly studied, there are still major gaps in the molecular details of lipid rearrangements in the bilayer during fusion peptide-membrane interactions. Here we employed differential scanning calorimetry (DSC) and electron spin resonance (ESR) to gather information on the membrane fusion mechanism promoted by two putative SARS FPs. DSC data showed the peptides strongly perturb the structural integrity of anionic vesicles and support the hypothesis that the peptides generate opposing curvature stresses on phosphatidylethanolamine membranes. ESR showed that both FPs increase lipid packing and head group ordering as well as reduce the intramembrane water content for anionic membranes. Therefore, bending moment in the bilayer could be generated, promoting negative curvature. The significance of the ordering effect, membrane dehydration, changes in the curvature properties and the possible role of negatively charged phospholipids in helping to overcome the high kinetic barrier involved in the different stages of the SARS-CoV-mediated membrane fusion are discussed.
SARS-CoV fusion peptides induce membrane surface ordering and curvature
Basso, Luis G. M.; Vicente, Eduardo F.; Crusca Jr., Edson; Cilli, Eduardo M.; Costa-Filho, Antonio J.
2016-01-01
Viral membrane fusion is an orchestrated process triggered by membrane-anchored viral fusion glycoproteins. The S2 subunit of the spike glycoprotein from severe acute respiratory syndrome (SARS) coronavirus (CoV) contains internal domains called fusion peptides (FP) that play essential roles in virus entry. Although membrane fusion has been broadly studied, there are still major gaps in the molecular details of lipid rearrangements in the bilayer during fusion peptide-membrane interactions. Here we employed differential scanning calorimetry (DSC) and electron spin resonance (ESR) to gather information on the membrane fusion mechanism promoted by two putative SARS FPs. DSC data showed the peptides strongly perturb the structural integrity of anionic vesicles and support the hypothesis that the peptides generate opposing curvature stresses on phosphatidylethanolamine membranes. ESR showed that both FPs increase lipid packing and head group ordering as well as reduce the intramembrane water content for anionic membranes. Therefore, bending moment in the bilayer could be generated, promoting negative curvature. The significance of the ordering effect, membrane dehydration, changes in the curvature properties and the possible role of negatively charged phospholipids in helping to overcome the high kinetic barrier involved in the different stages of the SARS-CoV-mediated membrane fusion are discussed. PMID:27892522
Molecular Characterization of Caveolin-induced Membrane Curvature*
Ariotti, Nicholas; Rae, James; Leneva, Natalya; Ferguson, Charles; Loo, Dorothy; Okano, Satomi; Hill, Michelle M.; Walser, Piers; Collins, Brett M.; Parton, Robert G.
2015-01-01
The generation of caveolae involves insertion of the cholesterol-binding integral membrane protein caveolin-1 (Cav1) into the membrane, however, the precise molecular mechanisms are as yet unknown. We have speculated that insertion of the caveolin scaffolding domain (CSD), a conserved amphipathic region implicated in interactions with signaling proteins, is crucial for caveola formation. We now define the core membrane-juxtaposed region of Cav1 and show that the oligomerization domain and CSD are protected by tight association with the membrane in both mature mammalian caveolae and a model prokaryotic system for caveola biogenesis. Cryoelectron tomography reveals the core membrane-juxtaposed domain to be sufficient to maintain oligomerization as defined by polyhedral distortion of the caveolar membrane. Through mutagenesis we demonstrate the importance of the membrane association of the oligomerization domain/CSD for defined caveola biogenesis and furthermore, highlight the functional significance of the intramembrane domain and the CSD for defined caveolin-induced membrane deformation. Finally, we define the core structural domain of Cav1, constituting only 66 amino acids and of great potential to nanoengineering applications, which is required for caveolin-induced vesicle formation in a bacterial system. These results have significant implications for understanding the role of Cav1 in caveola formation and in regulating cellular signaling events. PMID:26304117
Falk, Kerstin; Sedlmeier, Felix; Joly, Laurent; Netz, Roland R; Bocquet, Lydéric
2010-10-13
In this paper, we study the interfacial friction of water at graphitic interfaces with various topologies, water between planar graphene sheets, inside and outside carbon nanotubes, with the goal to disentangle confinement and curvature effects on friction. We show that the friction coefficient exhibits a strong curvature dependence; while friction is independent of confinement for the graphene slab, it decreases with carbon nanotube radius for water inside, but increases for water outside. As a paradigm the friction coefficient is found to vanish below a threshold diameter for armchair nanotubes. Using a statistical description of the interfacial friction, we highlight here a structural origin of this curvature dependence, mainly associated with a curvature-induced incommensurability between the water and carbon structures. These results support the recent experiments reporting fast transport of water in nanometric carbon nanotube membranes.
Smrt, Sean T.; Draney, Adrian W.; Lorieau, Justin L.
2015-01-01
The highly conserved N-terminal 23 residues of the hemagglutinin glycoprotein, known as the fusion peptide domain (HAfp23), is vital to the membrane fusion and infection mechanism of the influenza virus. HAfp23 has a helical hairpin structure consisting of two tightly packed amphiphilic helices that rest on the membrane surface. We demonstrate that HAfp23 is a new class of amphipathic helix that functions by leveraging the negative curvature induced by two tightly packed helices on membranes. The helical hairpin structure has an inverted wedge shape characteristic of negative curvature lipids, with a bulky hydrophobic region and a relatively small hydrophilic head region. The F3G mutation reduces this inverted wedge shape by reducing the volume of its hydrophobic base. We show that despite maintaining identical backbone structures and dynamics as the wild type HAfp23, the F3G mutant has an attenuated fusion activity that is correlated to its reduced ability to induce negative membrane curvature. The inverted wedge shape of HAfp23 is likely to play a crucial role in the initial stages of membrane fusion by stabilizing negative curvature in the fusion stalk. PMID:25398882
NASA Astrophysics Data System (ADS)
Angel, J. Roger P.; Burge, James H.; Hege, E. Keith; Kenworthy, Matthew A.; Woolf, Neville J.
2000-07-01
Very large space telescopes with primary mirrors made of flat segments have been recently proposed. The segments would be extremely lightweight, made like pellicles from stretched, reflective membranes. Here we consider the use of such membrane primary mirrors in which slight concave curvature is induced by electrostatic force, by application of a potential difference between the membrane and a control electrode behind. In this way segmented spherical or paraboloidal primaries of long focal length can be made directly, eliminating the correction optics needed when flat segments are used. The electric potential would be spatially and temporally controlled to obtain uniform curvature despite non-uniformity in membrane tension, to create slight asphericity if needed and to provide active damping of vibrations. We report the operation of a small prototype telescope with a SEMC primary.
BAR Domains as Sensors of Membrane Curvature: The Amphiphysin BAR Structure
NASA Astrophysics Data System (ADS)
Peter, Brian J.; Kent, Helen M.; Mills, Ian G.; Vallis, Yvonne; Butler, P. Jonathan G.; Evans, Philip R.; McMahon, Harvey T.
2004-01-01
The BAR (Bin/amphiphysin/Rvs) domain is the most conserved feature in amphiphysins from yeast to human and is also found in endophilins and nadrins. We solved the structure of the Drosophila amphiphysin BAR domain. It is a crescent-shaped dimer that binds preferentially to highly curved negatively charged membranes. With its N-terminal amphipathic helix and BAR domain (N-BAR), amphiphysin can drive membrane curvature in vitro and in vivo. The structure is similar to that of arfaptin2, which we find also binds and tubulates membranes. From this, we predict that BAR domains are in many protein families, including sorting nexins, centaurins, and oligophrenins. The universal and minimal BAR domain is a dimerization, membrane-binding, and curvature-sensing module.
Bavi, Omid; Cox, Charles D; Vossoughi, Manouchehr; Naghdabadi, Reza; Jamali, Yousef; Martinac, Boris
2016-02-05
Mechanosensitive (MS) channels are ubiquitous molecular force sensors that respond to a number of different mechanical stimuli including tensile, compressive and shear stress. MS channels are also proposed to be molecular curvature sensors gating in response to bending in their local environment. One of the main mechanisms to functionally study these channels is the patch clamp technique. However, the patch of membrane surveyed using this methodology is far from physiological. Here we use continuum mechanics to probe the question of how curvature, in a standard patch clamp experiment, at different length scales (global and local) affects a model MS channel. Firstly, to increase the accuracy of the Laplace's equation in tension estimation in a patch membrane and to be able to more precisely describe the transient phenomena happening during patch clamping, we propose a modified Laplace's equation. Most importantly, we unambiguously show that the global curvature of a patch, which is visible under the microscope during patch clamp experiments, is of negligible energetic consequence for activation of an MS channel in a model membrane. However, the local curvature (RL < 50) and the direction of bending are able to cause considerable changes in the stress distribution through the thickness of the membrane. Not only does local bending, in the order of physiologically relevant curvatures, cause a substantial change in the pressure profile but it also significantly modifies the stress distribution in response to force application. Understanding these stress variations in regions of high local bending is essential for a complete understanding of the effects of curvature on MS channels.
Bavi, Omid; Cox, Charles D.; Vossoughi, Manouchehr; Naghdabadi, Reza; Jamali, Yousef; Martinac, Boris
2016-01-01
Mechanosensitive (MS) channels are ubiquitous molecular force sensors that respond to a number of different mechanical stimuli including tensile, compressive and shear stress. MS channels are also proposed to be molecular curvature sensors gating in response to bending in their local environment. One of the main mechanisms to functionally study these channels is the patch clamp technique. However, the patch of membrane surveyed using this methodology is far from physiological. Here we use continuum mechanics to probe the question of how curvature, in a standard patch clamp experiment, at different length scales (global and local) affects a model MS channel. Firstly, to increase the accuracy of the Laplace’s equation in tension estimation in a patch membrane and to be able to more precisely describe the transient phenomena happening during patch clamping, we propose a modified Laplace’s equation. Most importantly, we unambiguously show that the global curvature of a patch, which is visible under the microscope during patch clamp experiments, is of negligible energetic consequence for activation of an MS channel in a model membrane. However, the local curvature (RL < 50) and the direction of bending are able to cause considerable changes in the stress distribution through the thickness of the membrane. Not only does local bending, in the order of physiologically relevant curvatures, cause a substantial change in the pressure profile but it also significantly modifies the stress distribution in response to force application. Understanding these stress variations in regions of high local bending is essential for a complete understanding of the effects of curvature on MS channels. PMID:26861405
NASA Astrophysics Data System (ADS)
Lee, Sin-Doo
2015-10-01
Soft matters such as liquid crystals and biological molecules exhibit a variety of interesting physical phenomena as well as new applications. Recently, in mimicking biological systems that have the ability to sense, regulate, grow, react, and regenerate in a highly responsive and self-adaptive manner, the significance of the liquid crystal order in living organisms, for example, a biological membrane possessing the lamellar order, is widely recognized from the viewpoints of physics and chemistry of interfaces and membrane biophysics. Lipid bilayers, resembling cell membranes, provide primary functions for the transport of biological components of ions and molecules in various cellular activities, including vesicle budding and membrane fusion, through lateral organization of the membrane components such as proteins. In this lecture, I will describe how the liquid crystal-analog curvature elasticity of a lipid bilayer plays a critical role in developing a new platform for understanding diverse biological functions at a cellular level. The key concept is to manipulate the local curvature at an interface between a solid substrate and a model membrane. Two representative examples will be demonstrated: one of them is the topographic control of lipid rafts in a combinatorial array where the ligand-receptor binding event occurs and the other concerns the reconstitution of a ring-type lipid raft in bud-mimicking architecture within the framework of the curvature elasticity.
A PH domain in ACAP1 possesses key features of the BAR domain in promoting membrane curvature
Pang, Xiaoyun; Fan, Jun; Zhang, Yan; Zhang, Kai; Gao, Bingquan; Ma, Jun; Li, Jian; Deng, Yuchen; Zhou, Qiangjun; Egelman, Edward H.; Hsu, Victor W.; Sun, Fei
2014-01-01
SUMMARY The BAR (Bin-Amphiphysin-Rvs) domain undergoes dimerization to produce a curved protein structure, which superimposes onto membrane through electrostatic interactions to sense and impart membrane curvature. In some cases, a BAR domain also possesses an amphipathic helix that inserts into the membrane to induce curvature. ACAP1 (Arfgap with Coil coil, Ankyrin repeat and PH domain protein 1) contains a BAR domain. Here, we show that this BAR domain can neither bind membrane nor impart curvature, but instead, requires a neighboring PH (Pleckstrin Homology) domain to achieve these functions. Specific residues within the PH domain are responsible for both membrane binding and curvature generation. The BAR domain adjacent to the PH domain instead interacts with the BAR domains of neighboring ACAP1 proteins to enable clustering at the membrane. Thus, we have uncovered the molecular basis for an unexpected and unconventional collaboration between PH and BAR domains in membrane bending. PMID:25284369
Chang-Ileto, Belle; Frere, Samuel G.; Chan, Robin B.; Voronov, Sergey V.; Roux, Aurélien; Di Paolo, Gilbert
2011-01-01
SUMMARY Phosphatidylinositol-4,5-bisphosphate [PI(4,5)P2] plays a fundamental role in clathrin-mediated endocytosis. However, precisely how PI(4,5)P2 metabolism is spatially and temporally regulated during membrane internalization and the functional consequences of endocytosis-coupled PI(4,5)P2 dephosphorylation remain to be explored. Using cell free assays with liposomes of varying curvatures, we show that the major synaptic phosphoinositide phosphatase, synaptojanin 1 (Synj1), acts with membrane curvature generators/sensors, such as the BAR protein endophilin, to preferentially remove PI(4,5)P2 from curved membranes as opposed to relatively flat ones. Moreover, in vivo recruitment of Synj1’s inositol 5-phosphatase domain to endophilin-induced membrane tubules results in fragmentation and condensation of these structures largely in a dynamin-dependent fashion. Our study raises the possibility that geometry-based mechanisms may contribute to spatially restricting PI(4,5)P2 elimination during membrane internalization and suggests that the PI(4,5)P2-to-PI4P conversion achieved by Synj1 at sites of high curvature may cooperate with dynamin to achieve membrane fission. PMID:21316588
Arenavirus budding resulting from viral-protein-associated cell membrane curvature.
Schley, David; Whittaker, Robert J; Neuman, Benjamin W
2013-09-06
Viral replication occurs within cells, with release (and onward infection) primarily achieved through two alternative mechanisms: lysis, in which virions emerge as the infected cell dies and bursts open; or budding, in which virions emerge gradually from a still living cell by appropriating a small part of the cell membrane. Virus budding is a poorly understood process that challenges current models of vesicle formation. Here, a plausible mechanism for arenavirus budding is presented, building on recent evidence that viral proteins embed in the inner lipid layer of the cell membrane. Experimental results confirm that viral protein is associated with increased membrane curvature, whereas a mathematical model is used to show that localized increases in curvature alone are sufficient to generate viral buds. The magnitude of the protein-induced curvature is calculated from the size of the amphipathic region hypothetically removed from the inner membrane as a result of translation, with a change in membrane stiffness estimated from observed differences in virion deformation as a result of protein depletion. Numerical results are based on experimental data and estimates for three arenaviruses, but the mechanisms described are more broadly applicable. The hypothesized mechanism is shown to be sufficient to generate spontaneous budding that matches well both qualitatively and quantitatively with experimental observations.
Arenavirus budding resulting from viral-protein-associated cell membrane curvature
Schley, David; Whittaker, Robert J.; Neuman, Benjamin W.
2013-01-01
Viral replication occurs within cells, with release (and onward infection) primarily achieved through two alternative mechanisms: lysis, in which virions emerge as the infected cell dies and bursts open; or budding, in which virions emerge gradually from a still living cell by appropriating a small part of the cell membrane. Virus budding is a poorly understood process that challenges current models of vesicle formation. Here, a plausible mechanism for arenavirus budding is presented, building on recent evidence that viral proteins embed in the inner lipid layer of the cell membrane. Experimental results confirm that viral protein is associated with increased membrane curvature, whereas a mathematical model is used to show that localized increases in curvature alone are sufficient to generate viral buds. The magnitude of the protein-induced curvature is calculated from the size of the amphipathic region hypothetically removed from the inner membrane as a result of translation, with a change in membrane stiffness estimated from observed differences in virion deformation as a result of protein depletion. Numerical results are based on experimental data and estimates for three arenaviruses, but the mechanisms described are more broadly applicable. The hypothesized mechanism is shown to be sufficient to generate spontaneous budding that matches well both qualitatively and quantitatively with experimental observations. PMID:23864502
On ripples and rafts: Curvature induced nanoscale structures in lipid membranes
NASA Astrophysics Data System (ADS)
Schmid, Friederike; Dolezel, Stefan; Lenz, Olaf; Meinhardt, Sebastian
2014-03-01
We develop an elastic theory that predicts the spontaneous formation of nanoscale structures in lipid bilayers which locally phase separate between two phases with different spontaneous monolayer curvature. The theory rationalizes in a unified manner the observation of a variety of nanoscale structures in lipid membranes: Rippled states in one-component membranes, lipid rafts in multicomponent membranes. Furthermore, we report on recent observations of rippled states and rafts in simulations of a simple coarse-grained model for lipid bilayers, which are compatible with experimental observations and with our elastic model.
NASA Astrophysics Data System (ADS)
RóŻycki, Bartosz; Lipowsky, Reinhard
2016-08-01
Biomimetic and biological membranes consist of molecular bilayers with two leaflets that are typically exposed to different aqueous solutions. We consider solutions of "particles" that experience effectively repulsive interactions with these membranes and form depletion layers in front of the membrane leaflets. The particles considered here are water-soluble, have a size between a few angstrom and a few nanometers as well as a rigid, more or less globular shape, and do neither adsorb onto the membranes nor permeate these membranes. Examples are provided by ions, small sugar molecules, globular proteins, or inorganic nanoparticles with a hydrophilic surface. We first study depletion layers in a hard-core system based on ideal particle solutions as well as hard-wall interactions between these particles and the membrane. For this system, we obtain exact expressions for the coverages and tensions of the two leaflets as well as for the spontaneous curvature of the bilayer membrane. All of these quantities depend linearly on the particle concentrations. The exact results for the hard-core system also show that the spontaneous curvature can be directly deduced from the planar membrane geometry. Our results for the hard-core system apply both to ions and solutes that are small compared to the membrane thickness and to nanoparticles with a size that is comparable to the membrane thickness, provided the particle solutions are sufficiently dilute. We then corroborate the different relationships found for the hard-core system by extensive simulations of a soft-core particle system using dissipative particle dynamics. The simulations confirm the linear relationships obtained for the hard-core system. Both our analytical and our simulation results show that the spontaneous curvature induced by a single particle species can be quite large. When one leaflet of the membrane is exposed, e.g., to a 100 mM solution of glucose, a lipid bilayer can acquire a spontaneous curvature of ±1
Shen, Chong; Meng, Qin; Zhang, Guoliang
2013-08-01
Tissue engineering devices as in vitro cell culture systems in scaffolds has encountered the bottleneck due to their much lower cell functions than real tissues/organs in vivo. Such situation has been improved in some extent by mimicking the cell microenvironments in vivo from either chemical or physical ways. However, microenvironmental curvature, commonly seen in real tissues/organs, has never been manipulated to regulate the cell performance in vitro. In this regard, this paper fabricated polysulfone membranes with or without polyethylene glycol modification to investigate the impact of curvature on two renal tubular cells. Regardless the varying membrane curvatures among hollow fiber membranes of different diameters and flat membrane of zero curvature, both renal cells could well attach at 4 h of seeding and form similar confluent layers at 6 days on each membrane. Nevertheless, the renal cells on hollow fibers, though showing confluent morphology as those on flat membranes, expressed higher renal functions and, moreover, the renal functions significantly increased with the membrane curvature among hollow fibers. Such upregulation on functions was unassociated with mass transport barrier of hollow fibers, because the cultures on lengthwise cut hollow fibers without mass transfer barrier showed same curvature effect on renal functions as whole hollow fibers. It could be proposed that the curvature of hollow fiber membrane approaching to the large curvature in kidney tubules increased the mechanical stress in the renal cells and thus might up-regulate the renal cell functions. In conclusion, the increase of substrate curvature could up-regulate the cell functions without altering the confluent cell morphology and this finding will facilitate the design of functional tissue engineering devices.
Mesoscale computational studies of membrane bilayer remodeling by curvature-inducing proteins
Ramakrishnan, N.; Sunil Kumar, P. B.; Radhakrishnan, Ravi
2014-01-01
Biological membranes constitute boundaries of cells and cell organelles. These membranes are soft fluid interfaces whose thermodynamic states are dictated by bending moduli, induced curvature fields, and thermal fluctuations. Recently, there has been a flood of experimental evidence highlighting active roles for these structures in many cellular processes ranging from trafficking of cargo to cell motility. It is believed that the local membrane curvature, which is continuously altered due to its interactions with myriad proteins and other macromolecules attached to its surface, holds the key to the emergent functionality in these cellular processes. Mechanisms at the atomic scale are dictated by protein-lipid interaction strength, lipid composition, lipid distribution in the vicinity of the protein, shape and amino acid composition of the protein, and its amino acid contents. The specificity of molecular interactions together with the cooperativity of multiple proteins induce and stabilize complex membrane shapes at the mesoscale. These shapes span a wide spectrum ranging from the spherical plasma membrane to the complex cisternae of the Golgi apparatus. Mapping the relation between the protein-induced deformations at the molecular scale and the resulting mesoscale morphologies is key to bridging cellular experiments across the various length scales. In this review, we focus on the theoretical and computational methods used to understand the phenomenology underlying protein-driven membrane remodeling. Interactions at the molecular scale can be computationally probed by all atom and coarse grained molecular dynamics (MD, CGMD), as well as dissipative particle dynamics (DPD) simulations, which we only describe in passing. We choose to focus on several continuum approaches extending the Canham - Helfrich elastic energy model for membranes to include the effect of curvature-inducing proteins and explore the conformational phase space of such systems. In this
Mesoscale computational studies of membrane bilayer remodeling by curvature-inducing proteins
NASA Astrophysics Data System (ADS)
Ramakrishnan, N.; Sunil Kumar, P. B.; Radhakrishnan, Ravi
2014-10-01
Biological membranes constitute boundaries of cells and cell organelles. These membranes are soft fluid interfaces whose thermodynamic states are dictated by bending moduli, induced curvature fields, and thermal fluctuations. Recently, there has been a flood of experimental evidence highlighting active roles for these structures in many cellular processes ranging from trafficking of cargo to cell motility. It is believed that the local membrane curvature, which is continuously altered due to its interactions with myriad proteins and other macromolecules attached to its surface, holds the key to the emergent functionality in these cellular processes. Mechanisms at the atomic scale are dictated by protein-lipid interaction strength, lipid composition, lipid distribution in the vicinity of the protein, shape and amino acid composition of the protein, and its amino acid contents. The specificity of molecular interactions together with the cooperativity of multiple proteins induce and stabilize complex membrane shapes at the mesoscale. These shapes span a wide spectrum ranging from the spherical plasma membrane to the complex cisternae of the Golgi apparatus. Mapping the relation between the protein-induced deformations at the molecular scale and the resulting mesoscale morphologies is key to bridging cellular experiments across various length scales. In this review, we focus on the theoretical and computational methods used to understand the phenomenology underlying protein-driven membrane remodeling. Interactions at the molecular scale can be computationally probed by all atom and coarse grained molecular dynamics (MD, CGMD), as well as dissipative particle dynamics (DPD) simulations, which we only describe in passing. We choose to focus on several continuum approaches extending the Canham-Helfrich elastic energy model for membranes to include the effect of curvature-inducing proteins and explore the conformational phase space of such systems. In this description, the
Stachowiak, Jeanne C.; Hayden, Carl C.; Negrete, Oscar.; Davis, Ryan Wesley; Sasaki, Darryl Y
2013-10-01
Pathogenic viruses are a primary threat to our national security and to the health and economy of our world. Effective defense strategies to combat viral infection and spread require the development of understanding of the mechanisms that these pathogens use to invade the host cell. We present in this report results of our research into viral particle recognition and fusion to cell membranes and the role that protein affinity and confinement in lipid domains plays in membrane curvature in cellular fusion and fission events. Herein, we describe 1) the assembly of the G attachment protein of Nipah virus using point mutation studies to define its role in viral particle fusion to the cell membrane, 2) how lateral pressure of membrane bound proteins induce curvature in model membrane systems, and 3) the role of membrane curvature in the selective partitioning of molecular receptors and specific affinity of associated proteins.
Koldsø, Heidi; Shorthouse, David; Hélie, Jean; Sansom, Mark S. P.
2014-01-01
Cell membranes are complex multicomponent systems, which are highly heterogeneous in the lipid distribution and composition. To date, most molecular simulations have focussed on relatively simple lipid compositions, helping to inform our understanding of in vitro experimental studies. Here we describe on simulations of complex asymmetric plasma membrane model, which contains seven different lipids species including the glycolipid GM3 in the outer leaflet and the anionic lipid, phosphatidylinositol 4,5-bisphophate (PIP2), in the inner leaflet. Plasma membrane models consisting of 1500 lipids and resembling the in vivo composition were constructed and simulations were run for 5 µs. In these simulations the most striking feature was the formation of nano-clusters of GM3 within the outer leaflet. In simulations of protein interactions within a plasma membrane model, GM3, PIP2, and cholesterol all formed favorable interactions with the model α-helical protein. A larger scale simulation of a model plasma membrane containing 6000 lipid molecules revealed correlations between curvature of the bilayer surface and clustering of lipid molecules. In particular, the concave (when viewed from the extracellular side) regions of the bilayer surface were locally enriched in GM3. In summary, these simulations explore the nanoscale dynamics of model bilayers which mimic the in vivo lipid composition of mammalian plasma membranes, revealing emergent nanoscale membrane organization which may be coupled both to fluctuations in local membrane geometry and to interactions with proteins. PMID:25340788
Koldsø, Heidi; Shorthouse, David; Hélie, Jean; Sansom, Mark S P
2014-10-01
Cell membranes are complex multicomponent systems, which are highly heterogeneous in the lipid distribution and composition. To date, most molecular simulations have focussed on relatively simple lipid compositions, helping to inform our understanding of in vitro experimental studies. Here we describe on simulations of complex asymmetric plasma membrane model, which contains seven different lipids species including the glycolipid GM3 in the outer leaflet and the anionic lipid, phosphatidylinositol 4,5-bisphophate (PIP2), in the inner leaflet. Plasma membrane models consisting of 1500 lipids and resembling the in vivo composition were constructed and simulations were run for 5 µs. In these simulations the most striking feature was the formation of nano-clusters of GM3 within the outer leaflet. In simulations of protein interactions within a plasma membrane model, GM3, PIP2, and cholesterol all formed favorable interactions with the model α-helical protein. A larger scale simulation of a model plasma membrane containing 6000 lipid molecules revealed correlations between curvature of the bilayer surface and clustering of lipid molecules. In particular, the concave (when viewed from the extracellular side) regions of the bilayer surface were locally enriched in GM3. In summary, these simulations explore the nanoscale dynamics of model bilayers which mimic the in vivo lipid composition of mammalian plasma membranes, revealing emergent nanoscale membrane organization which may be coupled both to fluctuations in local membrane geometry and to interactions with proteins.
Sankhagowit, Shalene; Lee, Ernest Y; Wong, Gerard C L; Malmstadt, Noah
2016-03-15
Oxidation is associated with conditions related to chronic inflammations and aging. Cubic structures have been observed in the smooth endoplasmic reticulum and mitochondrial membranes of cells under oxidative stress (e.g., tumor cells and virus-infected cells). It has been previously suspected that oxidation can result in the rearrangement of lipids from a fluid lamellar phase to a cubic structure in organelles containing membranes enriched with amphiphiles that have nonzero intrinsic curvature, such as phosphatidylethanolamine (PE) and cardiolipin. This study focuses on the oxidation of 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (DOPE), a lipid that natively forms an inverted hexagonal phase at physiological conditions. The oxidized samples contain an approximately 3:2 molar ratio of nonoxidized to oxidized DOPE. Optical microscopy images collected during the hydration of this mixture from a dried film suggest that the system evolves into a coexistence of a stable fluid lamellar phase and transient square lattice structures with unit cell sizes of 500-600 nm. Small-angle X-ray scattering of the same lipid mixture yielded a body-centered Im3m cubic phase with the lattice parameter of 14.04 nm. On average, the effective packing parameter of the oxidized DOPE species was estimated to be 0.657 ± 0.069 (standard deviation). This suggests that the oxidation of PE leads to a group of species with inverted molecular intrinsic curvature. Oxidation can create amphiphilic subpopulations that potently impact the integrity of the membrane, since negative Gaussian curvature intrinsic to cubic phases can enable membrane destabilization processes.
NASA Astrophysics Data System (ADS)
Lee, Michelle; Hwee Lai, Ghee; Schmidt, Nathan; Xian, Wujing; Wong, Gerard C. L.
2013-03-01
Mitochondria form a dynamic and interconnected network, which disintegrates during apoptosis to generate numerous smaller mitochondrial fragments. This process is at present not well understood. Yeast mitochondrial fission machinery proteins, Dnm1 and Fis1, are believed to regulate programmed cell death in yeast. Yeast Dnm1 has been previously shown to promote mitochondrial fragmentation and degradation characteristic of apoptotic cells, while yeast Fis1 inhibits cell death by limiting the mitochondrial fission induced by Dnm1 [Fannjiang et al, Genes & Dev. 2004. 18: 2785-2797]. To better understand the mechanisms of these antagonistic fission proteins, we use synchrotron small angle x-ray scattering (SAXS) to investigate their interaction with model cell membranes. The relationship between each protein, Dnm1 and Fis1, and protein-induced changes in membrane curvature and topology is examined. Through the comparison of the membrane rearrangement and phase behavior induced by each protein, we will discuss their respective roles in the regulation of mitochondrial fission.
Picard, G.; Schneider-Henriquez, J.E.; Fendler, J.H. )
1990-01-25
Two-exposure interferometric holograms have been shown to sensitively report ultrasmall-pressure (10 natm)-induced curvature changes in glyceryl monooleate (GMO) bilayer lipid membranes (BLMs). The number of concentric fringes observed, and hence the lateral distance between the plane of the Teflon and the BLM, increased linearly with increasing transmembrane pressure and led to a value of 1.1 {plus minus} 0.05 dyn/cm for the surface tension of the BLM. BLMs with appreciable Plateau-Gibbs borders have been shown to undergo nonuniform deformation; the bilayer portion is distorted less than the surrounding Plateau-Gibbs border upon the application of a transmembrane pressure gradient.
Lipid exchange between membranes: effects of membrane surface charge, composition, and curvature.
Zhu, Tao; Jiang, Zhongying; Ma, Yuqiang
2012-09-01
Intermembrane lipid exchange is critical to membrane functions and pharmaceutical applications. The exchange process is not fully understood and it is explored by quartz crystal microbalance with dissipation monitor method in this research. It is found that intermembrane lipid exchange is accelerated with the decrease of vesicle size and the increase of charge and liquid crystalline lipid composition ratio. Vesicle adsorption rate, membrane lateral pressure gradient, and lipid lateral diffusion coefficient are inferred to be critical in deciding the lipid exchange kinetics between membranes. Besides that, the membrane contact situation during lipid exchange is also studied. The maximum total membrane contact area is found to increase with the decrease of vesicle size, charged and liquid crystalline lipid composition ratio. A competition mechanism between the vesicle adsorption rate and the intermembrane lipid exchange rate was proposed to control the maximum total membrane contact area.
NASA Astrophysics Data System (ADS)
Lowengrub, John; Allard, Jun; Aland, Sebastian
2016-03-01
The formation of membrane vesicles from a larger membrane that occurs during endocytosis and other cell processes is typically orchestrated by curvature-inducing molecules attached to the membrane. Recent reports demonstrate that vesicles can form de novo in a few milliseconds. Membrane dynamics at these scales are strongly influenced by hydrodynamic interactions. To study this problem, we develop new diffuse interface models for the dynamics of inextensible vesicles in a viscous fluid with stiff, curvature-inducing molecules. The model couples the Navier-Stokes equations with membrane-induced bending forces that incorporate concentration-dependent bending stiffness coefficients and spontaneous curvatures, with equations for molecule transport and for a Lagrange multiplier to enforce local inextensibility. Two forms of surface transport equations are considered: Fickian surface diffusion and Cahn-Hilliard surface dynamics, with the former being more appropriate for small molecules and the latter being better for large molecules. The system is solved using adaptive finite element methods in 3D axisymmetric geometries. The results demonstrate that hydrodynamics can indeed enable the rapid formation of a small vesicle attached to the membrane by a narrow neck. When the Fickian model is used, this is a transient state with the steady state being a flat membrane with a uniformly distributed molecule concentration due to diffusion. When the Cahn-Hilliard model is used, molecule concentration gradients are sustained, the neck stabilizes and the system evolves to a steady-state with a small, compact vesicle attached to the membrane. By varying the membrane coverage of molecules in the Cahn-Hilliard model, we find that there is a critical (smallest) neck radius and a critical (fastest) budding time. These critical points are associated with changes in the vesicle morphology from spherical to mushroom-like as the molecule coverage on the membrane is increased.
Gardner, Jasmine M; Deserno, Markus; Abrams, Cameron F
2016-08-21
We use a combination of coarse-grained molecular dynamics simulations and theoretical modeling to examine three-junctions in mixed lipid bilayer membranes. These junctions are localized defect lines in which three bilayers merge in such a way that each bilayer shares one monolayer with one of the other two bilayers. The resulting local morphology is non-lamellar, resembling the threefold symmetric defect lines in inverse hexagonal phases, but it regularly occurs during membrane fission and fusion events. We realize a system of junctions by setting up a honeycomb lattice, which in its primitive cell contains two hexagons and four three-line junctions, permitting us to study their stability as well as their line tension. We specifically consider the effects of lipid composition and intrinsic curvature in binary mixtures, which contain a fraction of negatively curved lipids in a curvature-neutral background phase. Three-junction stability results from a competition between the junction and an open edge, which arises if one of the three bilayers detaches from the other two. We show that the stable phase is the one with the lower defect line tension. The strong and opposite monolayer curvatures present in junctions and edges enhance the mole fraction of negatively curved lipids in junctions and deplete it in edges. This lipid sorting affects the two line tensions and in turn the relative stability of the two phases. It also leads to a subtle entropic barrier for the transition between junction and edge that is absent in uniform membranes.
NASA Astrophysics Data System (ADS)
Gardner, Jasmine M.; Deserno, Markus; Abrams, Cameron F.
2016-08-01
We use a combination of coarse-grained molecular dynamics simulations and theoretical modeling to examine three-junctions in mixed lipid bilayer membranes. These junctions are localized defect lines in which three bilayers merge in such a way that each bilayer shares one monolayer with one of the other two bilayers. The resulting local morphology is non-lamellar, resembling the threefold symmetric defect lines in inverse hexagonal phases, but it regularly occurs during membrane fission and fusion events. We realize a system of junctions by setting up a honeycomb lattice, which in its primitive cell contains two hexagons and four three-line junctions, permitting us to study their stability as well as their line tension. We specifically consider the effects of lipid composition and intrinsic curvature in binary mixtures, which contain a fraction of negatively curved lipids in a curvature-neutral background phase. Three-junction stability results from a competition between the junction and an open edge, which arises if one of the three bilayers detaches from the other two. We show that the stable phase is the one with the lower defect line tension. The strong and opposite monolayer curvatures present in junctions and edges enhance the mole fraction of negatively curved lipids in junctions and deplete it in edges. This lipid sorting affects the two line tensions and in turn the relative stability of the two phases. It also leads to a subtle entropic barrier for the transition between junction and edge that is absent in uniform membranes.
NASA Astrophysics Data System (ADS)
Kawamoto, Shuhei; Klein, Michael L.; Shinoda, Wataru
2015-12-01
The effects of membrane curvature on the free energy barrier for membrane fusion have been investigated using coarse-grained molecular dynamics (CG-MD) simulations, assuming that fusion takes place through a stalk intermediate. Free energy barriers were estimated for stalk formation as well as for fusion pore formation using the guiding potential method. Specifically, the three different geometries of two apposed membranes were considered: vesicle-vesicle, vesicle-planar, and planar-planar membranes. The free energy barriers for the resulting fusion were found to depend importantly on the fusing membrane geometries; the lowest barrier was obtained for vesicular membranes. Further, lipid sorting was observed in fusion of the mixed membranes of dimyristoyl phosphatidylcholine and dioleoyl phosphatidylethanolamine (DOPE). Specifically, DOPE molecules were found to assemble around the stalk to support the highly negative curved membrane surface. A consistent result for lipid sorting was observed when a simple continuum model (CM) was used, where the Helfrich energy and mixing entropy of the lipids were taken into account. However, the CM predicts a much higher free energy barrier than found using CG-MD. This discrepancy originates from the conformational changes of lipids, which were not considered in the CM. The results of the CG-MD simulations reveal that a large conformational change in the lipid takes place around the stalk region, which results in a reduction of free energy barriers along the stalk mechanism of membrane fusion.
Kawamoto, Shuhei; Shinoda, Wataru; Klein, Michael L.
2015-12-28
The effects of membrane curvature on the free energy barrier for membrane fusion have been investigated using coarse-grained molecular dynamics (CG-MD) simulations, assuming that fusion takes place through a stalk intermediate. Free energy barriers were estimated for stalk formation as well as for fusion pore formation using the guiding potential method. Specifically, the three different geometries of two apposed membranes were considered: vesicle–vesicle, vesicle–planar, and planar–planar membranes. The free energy barriers for the resulting fusion were found to depend importantly on the fusing membrane geometries; the lowest barrier was obtained for vesicular membranes. Further, lipid sorting was observed in fusion of the mixed membranes of dimyristoyl phosphatidylcholine and dioleoyl phosphatidylethanolamine (DOPE). Specifically, DOPE molecules were found to assemble around the stalk to support the highly negative curved membrane surface. A consistent result for lipid sorting was observed when a simple continuum model (CM) was used, where the Helfrich energy and mixing entropy of the lipids were taken into account. However, the CM predicts a much higher free energy barrier than found using CG-MD. This discrepancy originates from the conformational changes of lipids, which were not considered in the CM. The results of the CG-MD simulations reveal that a large conformational change in the lipid takes place around the stalk region, which results in a reduction of free energy barriers along the stalk mechanism of membrane fusion.
Kawamoto, Shuhei; Klein, Michael L; Shinoda, Wataru
2015-12-28
The effects of membrane curvature on the free energy barrier for membrane fusion have been investigated using coarse-grained molecular dynamics (CG-MD) simulations, assuming that fusion takes place through a stalk intermediate. Free energy barriers were estimated for stalk formation as well as for fusion pore formation using the guiding potential method. Specifically, the three different geometries of two apposed membranes were considered: vesicle-vesicle, vesicle-planar, and planar-planar membranes. The free energy barriers for the resulting fusion were found to depend importantly on the fusing membrane geometries; the lowest barrier was obtained for vesicular membranes. Further, lipid sorting was observed in fusion of the mixed membranes of dimyristoyl phosphatidylcholine and dioleoyl phosphatidylethanolamine (DOPE). Specifically, DOPE molecules were found to assemble around the stalk to support the highly negative curved membrane surface. A consistent result for lipid sorting was observed when a simple continuum model (CM) was used, where the Helfrich energy and mixing entropy of the lipids were taken into account. However, the CM predicts a much higher free energy barrier than found using CG-MD. This discrepancy originates from the conformational changes of lipids, which were not considered in the CM. The results of the CG-MD simulations reveal that a large conformational change in the lipid takes place around the stalk region, which results in a reduction of free energy barriers along the stalk mechanism of membrane fusion.
2015-01-01
In striated muscles, invaginations from the plasma membrane, termed transverse tubules (T-tubule), function in the excitation–contraction coupling machinery. BIN1 (isoform8) plays a critical role in the biogenesis of T-tubules. BIN1 contains an N-terminal BAR domain to sense and induce membrane curvature, an isoform8-specific polybasic motif (exon10) as the phosphoinositide binding module and a C-terminal Src homology 3 (SH3) domain for the recruitment of downstream proteins such as dynamin 2. Previous studies of N-BAR domains focused on elucidating mechanisms of membrane curvature sensing and generation (MC-S&G). Less is known about how MC-S&G is regulated. We found that the SH3 domain binds to the exon10 motif more strongly compared to the proline-rich domain (PRD) of dynamin 2. Furthermore, we found that the MC-S&G ability of full-length BIN1 is inhibited on membranes lacking PI(4,5)P2. Addition of PI(4,5)P2 in the membrane activates BIN1 to sense and induce membrane curvature. Co-presence of the SH3 domain and exon10 motif leads to the strongest phosphoinositide-mediated control of BIN1 function. Addition of SH3 domain ligand (such as PRD peptides), as well as addition of the water-soluble PI(4,5)P2 analogue, can both enhance the MC-S&G ability of BIN1 on membranes without PI(4,5)P2, indicating that the key to activate BIN1 is to disrupt the exon10–SH3 interaction. The nonsense mutation K436X, found in centronuclear myopathy (CNM) patients, abolishes SH3 domain binding with either exon10 or the PRD motif, resulting in increased membrane deformation capacity. Our results suggest an autoinhibition model for BIN1 that involves a synergistic regulation by membrane composition and protein–protein interactions. PMID:25350771
Yang, L.; Gordon, V.D.; Trinkle, D.R.; Schmidt, N.W.; Davis, M.A.; DeVries, C.; Som, A.; Cronan, J.E., Jr.; Tew, G.N.; Wong, G.C.L.
2009-05-28
Phenylene ethynylenes comprise a prototypical class of synthetic antimicrobial compounds that mimic antimicrobial peptides produced by eukaryotes and have broad-spectrum antimicrobial activity. We show unambiguously that bacterial membrane permeation by these antimicrobials depends on the presence of negative intrinsic curvature lipids, such as phosphatidylethanolamine (PE) lipids, found in high concentrations within bacterial membranes. Plate-killing assays indicate that a PE-knockout mutant strain of Escherichia coli drastically out-survives the wild type against the membrane-active phenylene ethynylene antimicrobials, whereas the opposite is true when challenged with traditional metabolic antibiotics. That the PE deletion is a lethal mutation in normative environments suggests that resistant bacterial strains do not evolve because a lethal mutation is required to gain immunity. PE lipids allow efficient generation of negative curvature required for the circumferential barrel of an induced membrane pore; an inverted hexagonal HII phase, which consists of arrays of water channels, is induced by a small number of antimicrobial molecules. The estimated antimicrobial occupation in these water channels is nonlinear and jumps from {approx}1 to 3 per 4 nm of induced water channel length as the global antimicrobial concentration is increased. By comparing to exactly solvable 1D spin models for magnetic systems, we quantify the cooperativity of these antimicrobials.
Nonadditive Compositional Curvature Energetics of Lipid Bilayers
NASA Astrophysics Data System (ADS)
Sodt, A. J.; Venable, R. M.; Lyman, E.; Pastor, R. W.
2016-09-01
The unique properties of the individual lipids that compose biological membranes together determine the energetics of the surface. The energetics of the surface, in turn, govern the formation of membrane structures and membrane reshaping processes, and thus they will underlie cellular-scale models of viral fusion, vesicle-dependent transport, and lateral organization relevant to signaling. The spontaneous curvature, to the best of our knowledge, is always assumed to be additive. We describe observations from simulations of unexpected nonadditive compositional curvature energetics of two lipids essential to the plasma membrane: sphingomyelin and cholesterol. A model is developed that connects molecular interactions to curvature stress, and which explains the role of local composition. Cholesterol is shown to lower the number of effective Kuhn segments of saturated acyl chains, reducing lateral pressure below the neutral surface of bending and favoring positive curvature. The effect is not observed for unsaturated (flexible) acyl chains. Likewise, hydrogen bonding between sphingomyelin lipids leads to positive curvature, but only at sufficient concentration, below which the lipid prefers negative curvature.
Agrawal, Neeraj J.; Weinstein, Joshua; Radhakrishnan, Ravi
2011-01-01
Using a recently developed multiscale simulation methodology, we describe the equilibrium behaviour of bilayer membranes under the influence of curvature-inducing proteins using a linearized elastic free energy model. In particular, we describe how the cooperativity associated with a multitude of protein–membrane interactions and protein diffusion on a membrane-mediated energy landscape elicits emergent behaviour in the membrane phase. Based on our model simulations, we predict that, depending on the density of membrane-bound proteins and the degree to which a single protein molecule can induce intrinsic mean curvature in the membrane, a range of membrane phase behaviour can be observed including two different modes of vesicle-bud nucleation and repressed membrane undulations. A state diagram as a function of experimentally tunable parameters to classify the underlying states is proposed. PMID:21243078
Fossati, Matteo; Goud, Bruno; Borgese, Nica; Manneville, Jean-Baptiste
2014-01-01
Sorting of membrane proteins within the secretory pathway of eukaryotic cells is a complex process involving discrete sorting signals as well as physico-chemical properties of the transmembrane domain (TMD). Previous work demonstrated that tail-anchored (TA) protein sorting at the interface between the Endoplasmic Reticulum (ER) and the Golgi complex is exquisitely dependent on the length and hydrophobicity of the transmembrane domain, and suggested that an imbalance between TMD length and bilayer thickness (hydrophobic mismatch) could drive long TMD-containing proteins into curved membrane domains, including ER exit sites, with consequent export of the mismatched protein out of the ER. Here, we tested a possible role of curvature in TMD-dependent sorting in a model system consisting of Giant Unilamellar Vesicles (GUVs) from which narrow membrane tubes were pulled by micromanipulation. Fluorescent TA proteins differing in TMD length were incorporated into GUVs of uniform lipid composition or made of total ER lipids, and TMD-dependent sorting and diffusion, as well as the bending rigidity of bilayers made of microsomal lipids, were investigated. Long and short TMD-containing constructs were inserted with similar orientation, diffused equally rapidly in GUVs and in tubes pulled from GUVs, and no difference in their final distribution between planar and curved regions was detected. These results indicate that curvature alone is not sufficient to drive TMD-dependent sorting at the ER-Golgi interface, and set the basis for the investigation of the additional factors that must be required. PMID:25210649
Baptist, Matilda; Panagabko, Candace; Nickels, Jonathan D.; Katsaras, John; Atkinson, Jeffrey
2015-01-21
Previous work revealed that α-tocopherol transfer protein (α-TTP) co-localizes with bis(monoacylglycero)phosphate (BMP) in late endosomes. BMP is a lipid unique to late endosomes and is believed to induce membrane curvature and support the multivesicular nature of this organelle. In this paper, we examined the effect of BMP on α-TTP binding to membranes using dual polarization interferometry and vesicle-binding assay. α-TTP binding to membranes is increased by the curvature-inducing lipid BMP. Finally, α-TTP binds to membranes with greater affinity when they contain the 2,2'-BMP versus 3,1'-BMP isomers.
Dorn, Jonas F.; Zhang, Li; Phi, Tan-Trao; Lacroix, Benjamin; Maddox, Paul S.; Liu, Jian; Maddox, Amy Shaub
2016-01-01
During cytokinesis, the cell undergoes a dramatic shape change as it divides into two daughter cells. Cell shape changes in cytokinesis are driven by a cortical ring rich in actin filaments and nonmuscle myosin II. The ring closes via actomyosin contraction coupled with actin depolymerization. Of interest, ring closure and hence the furrow ingression are nonconcentric (asymmetric) within the division plane across Metazoa. This nonconcentricity can occur and persist even without preexisting asymmetric cues, such as spindle placement or cellular adhesions. Cell-autonomous asymmetry is not explained by current models. We combined quantitative high-resolution live-cell microscopy with theoretical modeling to explore the mechanistic basis for asymmetric cytokinesis in the Caenorhabditis elegans zygote, with the goal of uncovering basic principles of ring closure. Our theoretical model suggests that feedback among membrane curvature, cytoskeletal alignment, and contractility is responsible for asymmetric cytokinetic furrowing. It also accurately predicts experimental perturbations of conserved ring proteins. The model further suggests that curvature-mediated filament alignment speeds up furrow closure while promoting energy efficiency. Collectively our work underscores the importance of membrane–cytoskeletal anchoring and suggests conserved molecular mechanisms for this activity. PMID:26912796
Lee, Il-Hyung; Kai, Hiroyuki; Carlson, Lars-Anders; Groves, Jay T; Hurley, James H
2015-12-29
The endosomal sorting complexes required for transport (ESCRT) machinery functions in HIV-1 budding, cytokinesis, multivesicular body biogenesis, and other pathways, in the course of which it interacts with concave membrane necks and bud rims. To test the role of membrane shape in regulating ESCRT assembly, we nanofabricated templates for invaginated supported lipid bilayers. The assembly of the core ESCRT-III subunit CHMP4B/Snf7 is preferentially nucleated in the resulting 100-nm-deep membrane concavities. ESCRT-II and CHMP6 accelerate CHMP4B assembly by increasing the concentration of nucleation seeds. Superresolution imaging was used to visualize CHMP4B/Snf7 concentration in a negatively curved annulus at the rim of the invagination. Although Snf7 assemblies nucleate slowly on flat membranes, outward growth onto the flat membrane is efficiently nucleated at invaginations. The nucleation behavior provides a biophysical explanation for the timing of ESCRT-III recruitment and membrane scission in HIV-1 budding.
Non-additive compositional curvature energetics of lipid bilayers
Sodt, A.J.; Venable, R.M.; Lyman, E.; Pastor, R.W.
2016-01-01
The unique properties of the individual lipids that compose biological membranes together determine the energetics of the surface. The energetics of the surface in turn govern the formation of membrane structures and membrane reshaping processes, and will thus underlie cellular-scale models of viral fusion, vesicle-dependent transport, and lateral organization relevant to signaling. The spontaneous curvature, to the best of our knowledge, is always assumed to be additive. The letter describes observations from simulations of unexpected non-additive compositional curvature energetics of two lipids essential to the plasma membrane: sphingomyelin and cholesterol. A model is developed that connects molecular interactions to curvature stress, and which explains the role of local composition. Cholesterol is shown to lower the number of effective Kuhn segments of saturated acyl chains, reducing lateral pressure below the neutral surface of bending and favoring positive curvature. The effect is not observed for unsaturated (flexible) acyl chains. Likewise, hydrogen bonding between sphingomyelin lipids leads to positive curvature, but only at sufficient concentration, below which the lipid prefers negative curvature. PMID:27715135
da Hora, G C A; Archilha, N L; Lopes, J L S; Müller, D M; Coutinho, K; Itri, R; Soares, T A
2016-11-04
Antimicrobial peptides (AMPs) are cationic peptides that kill bacteria with a broad spectrum of action, low toxicity to mammalian cells and exceptionally low rates of bacterial resistance. These features have led to considerable efforts in developing AMPs as an alternative antibacterial therapy. In vitro studies have shown that AMPs interfere with membrane bilayer integrity via several possible mechanisms, which are not entirely understood. We have performed the synthesis, membrane lysis measurements, and biophysical characterization of a novel hybrid peptide. These measurements show that PA-Pln149 does not form nanopores, but instead promotes membrane rupture. It causes fast rupture of the bacterial model membrane (POPG-rich) at concentrations 100-fold lower than that required for the disruption of mammalian model membranes (POPC-rich). Atomistic molecular dynamics (MD) simulations were performed for single and multiple copies of PA-Pln149 in the presence of mixed and pure POPC/POPG bilayers to investigate the concentration-dependent membrane disruption by the hybrid peptide. These simulations reproduced the experimental trend and provided a potential mechanism of action for PA-Pln149. It shows that the PA-Pln149 does not form nanopores, but instead promotes membrane destabilization through peptide aggregation and induction of membrane negative curvature with the collapse of the lamellar arrangement. The sequence of events depicted for PA-Pln149 may offer insights into the mechanism of action of AMPs previously shown to induce negative deformation of membrane curvature and often associated with peptide translocation via non-bilayer intermediate structures.
Wang, Tuo; Hong, Mei
2015-01-01
A wide variety of membrane proteins induce membrane curvature for function, thus it is important to develop new methods to simultaneously determine membrane curvature and protein binding sites in membranes with multiple curvatures. We introduce solid-state NMR methods based on magnetically oriented bicelles and off-magic-angle spinning (OMAS) to measure membrane curvature and the binding site of proteins in mixed-curvature membranes. We demonstrate these methods on the influenza virus M2 protein, which not only acts as a proton channel but also mediates virus assembly and membrane scission. An M2 peptide encompassing the transmembrane (TM) domain and an amphipathic helix, M2(21-61), was studied and compared with the TM peptide (M2TM). Static 31P NMR spectra of magnetically oriented DMPC/DHPC bicelles exhibit a temperature-independent isotropic chemical shift in the presence of M2(21-61) but not M2TM, indicating that the amphipathic helix confers the peptide with the ability to generate a high-curvature phase. 2D 31P spectra indicate that this high-curvature phase is associated with the DHPC bicelle edges, suggestive of the structure of budding viruses from the host cell. 31P- and 13C-detected 1H relaxation times of the lipids indicate that the majority of M2(21-61) is bound to the high-curvature phase. Using OMAS experiments, we resolved the 31P signals of lipids with identical headgroups based on their distinct chemical shift anisotropies. Based on this resolution, 2D 1H-31P correlation spectra show that the amide protons in M2(21-61) correlate with the DMPC but not the DHPC 31P signal of the bicelle, indicating that a small percentage of M2(21-61) partitions into the planar region of the bicelles. These results show that the M2 amphipathic helix induces high membrane curvature and localizes the protein to this phase, in excellent agreement with the membrane-scission function of the protein. These bicelle-based relaxation and OMAS solid-state NMR techniques are
Shi, Junli; Xia, Yonggao; Yuan, Zhizhang; Hu, Huasheng; Li, Xianfeng; Zhang, Huamin; Liu, Zhaoping
2015-01-01
Separators with high reliability and security are in urgent demand for the advancement of high performance lithium ion batteries. Here, we present a new and practical porous membrane with three-dimension (3D) heat-resistant skeleton and high curvature pore structure as a promising separator candidate to facilitate advances in battery safety and performances beyond those obtained from the conventional separators. The unique material properties combining with the well-developed structural characteristics enable the 3D porous skeleton to own several favorable properties, including superior thermal stability, good wettability with liquid electrolyte, high ion conductivity and internal short-circuit protection function, etc. which give rise to acceptable battery performances. Considering the simply and cost-effective preparation process, the porous membrane is deemed to be an interesting direction for the future lithium ion battery separator. PMID:25653104
Shi, Junli; Xia, Yonggao; Yuan, Zhizhang; Hu, Huasheng; Li, Xianfeng; Zhang, Huamin; Liu, Zhaoping
2015-02-05
Separators with high reliability and security are in urgent demand for the advancement of high performance lithium ion batteries. Here, we present a new and practical porous membrane with three-dimension (3D) heat-resistant skeleton and high curvature pore structure as a promising separator candidate to facilitate advances in battery safety and performances beyond those obtained from the conventional separators. The unique material properties combining with the well-developed structural characteristics enable the 3D porous skeleton to own several favorable properties, including superior thermal stability, good wettability with liquid electrolyte, high ion conductivity and internal short-circuit protection function, etc. which give rise to acceptable battery performances. Considering the simply and cost-effective preparation process, the porous membrane is deemed to be an interesting direction for the future lithium ion battery separator.
Clancy, Eileen K.; Barry, Chris; Ciechonska, Marta; Duncan, Roy
2010-02-05
The reovirus fusion-associated small transmembrane (FAST) proteins evolved to induce cell-cell, rather than virus-cell, membrane fusion. It is unclear whether the FAST protein fusion reaction proceeds in the same manner as the enveloped virus fusion proteins. We now show that fluorescence-based cell-cell and cell-RBC hemifusion assays are unsuited for detecting lipid mixing in the absence of content mixing during FAST protein-mediated membrane fusion. Furthermore, membrane curvature agents that inhibit hemifusion or promote pore formation mediated by influenza hemagglutinin had no effect on p14-induced cell-cell fusion, even under conditions of limiting p14 concentrations. Standard assays used to detect fusion intermediates induced by enveloped virus fusion proteins are therefore not applicable to the FAST proteins. These results suggest the possibility that the nature of the fusion intermediates or the mechanisms used to transit through the various stages of the fusion reaction may differ between these distinct classes of viral fusogens.
Gallop, Jennifer L; Walrant, Astrid; Cantley, Lewis C; Kirschner, Marc W
2013-04-30
The membrane-cytosol interface is the major locus of control of actin polymerization. At this interface, phosphoinositides act as second messengers to recruit membrane-binding proteins. We show that curved membranes, but not flat ones, can use phosphatidylinositol 3-phosphate [PI(3)P] along with phosphatidylinositol 4,5-bisphosphate [PI(4,5)P2] to stimulate actin polymerization. In this case, actin polymerization requires the small GTPase cell cycle division 42 (Cdc42), the nucleation-promoting factor neural Wiskott-Aldrich syndrome protein (N-WASP) and the actin nucleator the actin-related protein (Arp) 2/3 complex. In liposomes containing PI(4,5)P2 as the sole phosphoinositide, actin polymerization requires transducer of Cdc42 activation-1 (toca-1). In the presence of phosphatidylinositol 3-phosphate, polymerization is both more efficient and independent of toca-1. Under these conditions, sorting nexin 9 (Snx9) can be implicated as a specific adaptor that replaces toca-1 to mobilize neural Wiskott-Aldrich syndrome protein and the Arp2/3 complex. This switch in phosphoinositide and adaptor specificity for actin polymerization from membranes has implications for how different types of actin structures are generated at precise times and locations in the cell.
NASA Astrophysics Data System (ADS)
Noguchi, Hiroshi
2016-05-01
The assembly of curved protein rods on fluid membranes is studied using implicit-solvent meshless membrane simulations. As the rod curvature increases, the rods on a membrane tube assemble along the azimuthal direction first and subsequently along the longitudinal direction. Here, we show that both transition curvatures decrease with increasing rod stiffness. For comparison, curvature-inducing isotropic inclusions are also simulated. When the isotropic inclusions have the same bending rigidity as the other membrane regions, the inclusions are uniformly distributed on the membrane tubes and vesicles even for large spontaneous curvature of the inclusions. However, the isotropic inclusions with much larger bending rigidity induce shape deformation and are concentrated on the region of a preferred curvature. For high rod density, high rod stiffness, and/or low line tension of the membrane edge, the rod assembly induces vesicle rupture, resulting in the formation of a high-genus vesicle. A gradual change in the curvature suppresses this rupture. Hence, large stress, compared to the edge tension, induced by the rod assembly is the key factor determining rupture. For rod curvature with the opposite sign to the vesicle curvature, membrane rupture induces inversion of the membrane, leading to division into multiple vesicles as well as formation of a high-genus vesicle.
Siegel, D. P.; Kozlov, M. M.
2004-01-01
The energy of intermediates in fusion of phospholipid bilayers is sensitive to \\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\setlength{\\oddsidemargin}{-69pt} \\begin{document} \\begin{equation*}{\\bar {{\\kappa}}}_{{\\mathrm{m}}},\\end{equation*}\\end{document} the saddle splay (Gaussian curvature) elastic modulus of the lipid monolayers. The value \\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\setlength{\\oddsidemargin}{-69pt} \\begin{document} \\begin{equation*}{\\bar {{\\kappa}}}_{{\\mathrm{m}}}\\end{equation*}\\end{document} is also important in understanding the stability of inverted cubic (QII) and rhombohedral (R) phases relative to the lamellar (Lα) and inverted hexagonal (HII) phases in phospholipids. However, \\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\setlength{\\oddsidemargin}{-69pt} \\begin{document} \\begin{equation*}{\\bar {{\\kappa}}}_{{\\mathrm{m}}}\\end{equation*}\\end{document} cannot be measured directly. It was previously measured by observing changes in QII phase lattice dimensions as a function of water content. Here we use observations of the phase behavior of N-mono-methylated dioleoylphosphatidylethanolamine (DOPE-Me) to determine \\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\setlength{\\oddsidemargin}{-69pt} \\begin{document} \\begin{equation*}{\\bar {{\\kappa}}}_{{\\mathrm{m}}}.\\end{equation*}\\end{document} At the temperature of the Lα/QII phase transition, TQ, the partial energies of the two phases are equal, and we can express \\documentclass[12pt
Curvature-induced lipid segregation
NASA Astrophysics Data System (ADS)
Zheng, Bin; Meng, Qing-Tian; B. Selinger Robin, L.; V. Selinger, Jonathan; Ye, Fang-Fu
2015-06-01
We investigate how an externally imposed curvature influences lipid segregation on two-phase-coexistent membranes. We show that the bending-modulus contrast of the two phases and the curvature act together to yield a reduced effective line tension. On largely curved membranes, a state of multiple domains (or rafts) forms due to a mechanism analogous to that causing magnetic-vortex formation in type-II superconductors. We determine the criterion for such a multi-domain state to occur; we then calculate respectively the size of the domains formed on cylindrically and spherically curved membranes. Project supported by the Hundred-Talent Program of the Chinese Academy of Sciences (FY) and the National Science Foundation of USA via Grant DMR-1106014 (RLBS, JVS).
Raft Formation in Lipid Bilayers Coupled to Curvature
Sadeghi, Sina; Müller, Marcus; Vink, Richard L.C.
2014-01-01
We present computer simulations of a membrane in which the local composition is coupled to the local membrane curvature. At high temperatures (i.e., above the temperature of macroscopic phase separation), finite-sized transient domains are observed, reminiscent of lipid rafts. The domain size is in the range of hundred nanometers, and set by the membrane elastic properties. These findings are in line with the notion of the membrane as a curvature-induced microemulsion. At low temperature, the membrane phase separates. The transition to the phase-separated regime is continuous and belongs to the two-dimensional Ising universality class when the coupling to curvature is weak, but becomes first-order for strong curvature-composition coupling. PMID:25296311
Lipids, curvature, and nano-medicine*
Mouritsen, Ole G
2011-01-01
The physical properties of the lamellar lipid-bilayer component of biological membranes are controlled by a host of thermodynamic forces leading to overall tensionless bilayers with a conspicuous lateral pressure profile and build-in curvature-stress instabilities that may be released locally or globally in terms of morphological changes. In particular, the average molecular shape and the propensity of the different lipid and protein species for forming non-lamellar and curved structures are a source of structural transitions and control of biological function. The effects of different lipids, sterols, and proteins on membrane structure are discussed and it is shown how one can take advantage of the curvature-stress modulations brought about by specific molecular agents, such as fatty acids, lysolipids, and other amphiphilic solutes, to construct intelligent drug-delivery systems that function by enzymatic triggering via curvature. Practical applications: The simple concept of lipid molecular shape and how it impacts on the structure of lipid aggregates, in particular the curvature and curvature stress in lipid bilayers and liposomes, can be exploited to construct liposome-based drug-delivery systems, e.g., for use as nano-medicine in cancer therapy. Non-lamellar-forming lysolipids and fatty acids, some of which may be designed to be prodrugs, can be created by phospholipase action in diseased tissues thereby providing for targeted drug release and proliferation of molecular entities with conical shape that break down the permeability barrier of the target cells and may hence enhance efficacy. PMID:22164124
Tani, T.; Lumme, A.; Linnala, A.; Kivilaakso, E.; Kiviluoto, T.; Burgeson, R. E.; Kangas, L.; Leivo, I.; Virtanen, I.
1997-01-01
We studied the adhesion mechanism of pancreatic carcinoma using in vitro adhesion and migration assays of stable cell lines and tumors grown from these cell lines in nude mice. We also compared the results with the expression profiles of laminins and their receptors in pancreatic carcinomas to evaluate the relevance of these mechanisms in vivo. All of the cell lines preferably adhered to laminin-5, irrespective of their capability to synthesize laminin-5. Cell migration was studied in the presence of hepatocyte growth factor, as it increased the speed of migration manyfold. Herbimycin A treatment and antibodies against the beta 1 and alpha 3 integrin subunits and laminin alpha 3 chain almost entirely blocked cell migration of the BxPC-3 cell line, whereas migration was nearly unaffected by RGD peptide and only moderately inhibited by antibody against the alpha 6 integrin subunit. Indirect immunofluorescence microscopy of wounded BxPC-3 cells suggested a rapid endocytosis of alpha 3 integrin subunit in the cells at the margin of the wound and a rapid, polarized rearrangement of the alpha 6 beta 4 integrin. Especially HGF-treated cultures showed a prominent cytoplasmic reaction for laminin-5 at the margin of the wound. Xenografted cells formed tumors that produced and deposited the same laminin chains as the in vitro cultures. Frozen sections of human pancreatic carcinomas showed reactivity for laminin chains suggestive for expression of laminin-1 and laminin-5. Both xenografted tumors and human pancreatic carcinomas also showed stromal reactivity for laminin-5. Electron microscopy of the human tumors suggested that this was due to an abundant reduplication the basement-membrane-like material around the nests of malignant cells. Our results suggest that pancreatic carcinomas synthesize and deposit laminin-5 in the basement membrane in an abnormal manner. Invading cells adhere to this newly produced basement membrane and migrate on it by using the alpha 3 beta 1
Wang,W.; Yang, L.; Huang, H.
2007-01-01
Recent experiments suggested that cholesterol and other lipid components of high negative spontaneous curvature facilitate membrane fusion. This is taken as evidence supporting the stalk-pore model of membrane fusion in which the lipid bilayers go through intermediate structures of high curvature. How do the high-curvature lipid components lower the free energy of the curved structure? Do the high-curvature lipid components modify the average spontaneous curvature of the relevant monolayer, thereby facilitate its bending, or do the lipid components redistribute in the curved structure so as to lower the free energy? This question is fundamental to the curvature elastic energy for lipid mixtures. Here we investigate the lipid distribution in a monolayer of a binary lipid mixture before and after bending, or more precisely in the lamellar, hexagonal, and distorted hexagonal phases. The lipid mixture is composed of 2:1 ratio of brominated di18:0PC and cholesterol. Using a newly developed procedure for the multiwavelength anomalous diffraction method, we are able to isolate the bromine distribution and reconstruct the electron density distribution of the lipid mixture in the three phases. We found that the lipid distribution is homogenous and uniform in the lamellar and hexagonal phases. But in the distorted hexagonal phase, the lipid monolayer has nonuniform curvature, and cholesterol almost entirely concentrates in the high curvature region. This finding demonstrates that the association energies between lipid molecules vary with the curvature of membrane. Thus, lipid components in a mixture may redistribute under conditions of nonuniform curvature, such as in the stalk structure. In such cases, the spontaneous curvature depends on the local lipid composition and the free energy minimum is determined by lipid distribution as well as curvature.
NASA Astrophysics Data System (ADS)
Monga, Olivier; Ayache, Nicholas; Sander, Peter T.
1991-09-01
Modern medical image techniques, such as magnetic resonance image (MRI) or x-ray computed tomography provide three dimensional images of internal structures of the body, usually by means of a stack of tomographic images. The first stage in the automatic analysis of such data is 3-D edge detection1,2 which provides points corresponding to the boundaries of the surfaces forming the 3-D structure. The next stage is to characterize the local geometry of these surfaces in order to extract points or lines on which registration and/or tracking procedures can rely.3,4,5,6 This paper presents a pipeline of processes which define a hierarchical description of the second order differential characteristics of the surfaces. The focus is on the theoretical coherence of these levels of representation. Using uncertainty, a link is established between the edge detection and the local surface approximation by addressing the uncertainties inherent to edge detection in 2-D or 3-D images; and how to incorporate these uncertainties into the computation of local geometric models. In particular, calculate the uncertainty of edge location, direction, and magnitude for the 3-D Deriche operator is calculated.1,2 Statistical results are then used as a solid theoretical foundation on which to base subsequent computations, such as the determination of local surface curvature using local geometric models for surface segmentation. From the local fitting, for each edge point the mean and Gaussian curvature, principal curvatures and directions, curvature singularities, lines of curvature singularities, and covariance matrices defining the uncertainties are calculated. Experimental results for real data using two 3-D scanner images of the same organ taken at different positions demonstrate the stability of the mean and Gaussian curvatures. Experimental results for real data showing the determination of local curvature extremes of surfaces extracted from MR images are presented.
Stiffness Modulation of Rayed Fins by Curvature
NASA Astrophysics Data System (ADS)
Nguyen, Khoi; Yu, Ning; Venkadesan, Madhusudhan; Bandi, Mahesh; Mandre, Shreyas
2016-11-01
Fishes with rayed fins comprise over 99% of all extant fish species. Multifunctional use of fins, from propulsion to station holding, requires substantial modulation of stiffness. We propose that fishes stiffen the fin by curving it transverse to its length. This effect is similar to stiffening a dollar bill by curling it because of curvature-induced coupling of out-of-plane bending with in-plane stretching. Unlike a piece of paper, rayed fins are a composite of rays and membranes. We model this as parallel elastic beams (rays) with springy interconnections (membranes). Our analysis shows that the key parameters stiffening the fin are the ray anisotropy to bending, the misalignment of principal bending directions of adjacent rays, and the membrane elasticity. The composite fin stiffens when the principal bending directions of adjacent rays are misaligned due to fin curvature, which necessarily causes the membrane to stretch. Unlike a homogenous thin sheet, composite rayed structures are able to mimic curvature-induced stiffening by using misaligned rays even if the fin appears geometrically flat. Preliminary radiographic evidence from the rays of fish fins supports such a mechanism. Funding by Human Frontier Science Program.
Tseng, Hua-an; Nadim, Farzan
2010-01-01
Many oscillatory networks involve neurons that exhibit intrinsic rhythmicity, but possess a large variety of voltage-gated currents which interact in a complex fashion making it difficult to determine which factors control frequency. Yet, these neurons often have preferred (resonance) frequencies that can be close to the network frequency. Because the preferred frequency results from the dynamics of ionic currents, it can be assumed to depend on parameters that determine the neuron’s oscillatory waveform shape. The pyloric network frequency in the crab Cancer borealis is correlated with the preferred frequency of its bursting pacemaker neurons AB and PD. We measure the preferred frequency of the PD neuron in voltage-clamp, which allows control of the oscillation voltage range and waveforms (sine waves and realistic oscillation waveforms), and showthat1) the preferred frequency depends on the voltage range of the oscillating voltage waveform; 2) the slope of the waveform near its peak has a strongly negative correlation with the preferred frequency; and 3) correlations between parameters of the PD neuron oscillation waveform and its preferred frequency can be used to predict shifts in the network frequency. As predicted by these results, dynamic clamp shifts of the upper or lower voltage limits of the PD neuron waveform during ongoing oscillations changed the network frequency, consistent with the predictions from the preferred frequency. These results show that the voltage waveform of oscillatory neurons can be predictive of their preferred frequency and thus the network oscillation frequency. PMID:20702710
Tseng, Hua-an; Nadim, Farzan
2010-08-11
Many oscillatory networks involve neurons that exhibit intrinsic rhythmicity but possess a large variety of voltage-gated currents that interact in a complex fashion, making it difficult to determine which factors control frequency. Yet these neurons often have preferred (resonance) frequencies that can be close to the network frequency. Because the preferred frequency results from the dynamics of ionic currents, it can be assumed to depend on parameters that determine the neuron's oscillatory waveform shape. The pyloric network frequency in the crab Cancer borealis is correlated with the preferred frequency of its bursting pacemaker neurons anterior burster and pyloric dilator (PD). We measured the preferred frequency of the PD neuron in voltage clamp, which allows control of the oscillation voltage range and waveforms (sine waves and realistic oscillation waveforms), and showed that (1) the preferred frequency depends on the voltage range of the oscillating voltage waveform; (2) the slope of the waveform near its peak has a strongly negative correlation with the preferred frequency; and (3) correlations between parameters of the PD neuron oscillation waveform and its preferred frequency can be used to predict shifts in the network frequency. As predicted by these results, dynamic clamp shifts of the upper or lower voltage limits of the PD neuron waveform during ongoing oscillations changed the network frequency, consistent with the predictions from the preferred frequency. These results show that the voltage waveform of oscillatory neurons can be predictive of their preferred frequency and thus the network oscillation frequency.
NASA Astrophysics Data System (ADS)
Chambolle, Antonin; Morini, Massimiliano; Ponsiglione, Marcello
2015-12-01
This paper aims at building a unified framework to deal with a wide class of local and nonlocal translation-invariant geometric flows. We introduce a class of nonlocal generalized mean curvatures and prove the existence and uniqueness for the level set formulation of the corresponding geometric flows. We then introduce a class of generalized perimeters, whose first variation is an admissible generalized curvature. Within this class, we implement a minimizing movements scheme and we prove that it approximates the viscosity solution of the corresponding level set PDE. We also describe several examples and applications. Besides recovering and presenting in a unified way existence, uniqueness, and approximation results for several geometric motions already studied and scattered in the literature, the theory developed in this paper also allows us to establish new results.
Forman curvature for complex networks
NASA Astrophysics Data System (ADS)
Sreejith, R. P.; Mohanraj, Karthikeyan; Jost, Jürgen; Saucan, Emil; Samal, Areejit
2016-06-01
We adapt Forman’s discretization of Ricci curvature to the case of undirected networks, both weighted and unweighted, and investigate the measure in a variety of model and real-world networks. We find that most nodes and edges in model and real networks have a negative curvature. Furthermore, the distribution of Forman curvature of nodes and edges is narrow in random and small-world networks, while the distribution is broad in scale-free and real-world networks. In most networks, Forman curvature is found to display significant negative correlation with degree and centrality measures. However, Forman curvature is uncorrelated with clustering coefficient in most networks. Importantly, we find that both model and real networks are vulnerable to targeted deletion of nodes with highly negative Forman curvature. Our results suggest that Forman curvature can be employed to gain novel insights on the organization of complex networks.
Bacterial cell curvature through mechanical control of cell growth
Cabeen, Matthew T; Charbon, Godefroid; Vollmer, Waldemar; Born, Petra; Ausmees, Nora; Weibel, Douglas B; Jacobs-Wagner, Christine
2009-01-01
The cytoskeleton is a key regulator of cell morphogenesis. Crescentin, a bacterial intermediate filament-like protein, is required for the curved shape of Caulobacter crescentus and localizes to the inner cell curvature. Here, we show that crescentin forms a single filamentous structure that collapses into a helix when detached from the cell membrane, suggesting that it is normally maintained in a stretched configuration. Crescentin causes an elongation rate gradient around the circumference of the sidewall, creating a longitudinal cell length differential and hence curvature. Such curvature can be produced by physical force alone when cells are grown in circular microchambers. Production of crescentin in Escherichia coli is sufficient to generate cell curvature. Our data argue for a model in which physical strain borne by the crescentin structure anisotropically alters the kinetics of cell wall insertion to produce curved growth. Our study suggests that bacteria may use the cytoskeleton for mechanical control of growth to alter morphology. PMID:19279668
On nonlinear higher spin curvature
NASA Astrophysics Data System (ADS)
Manvelyan, Ruben; Mkrtchyan, Karapet; Rühl, Werner; Tovmasyan, Murad
2011-05-01
We present the first nonlinear term of the higher spin curvature which is covariant with respect to deformed gauge transformations that are linear in the field. We consider the case of spin 3 after presenting spin 2 as an example, and then construct the general spin s quadratic term of the de Wit-Freedman curvature.
Representation of tactile curvature in macaque somatosensory area 2
Connor, Charles E.; Hsiao, Steven S.
2013-01-01
Tactile shape information is elaborated in a cortical hierarchy spanning primary (SI) and secondary somatosensory cortex (SII). Indeed, SI neurons in areas 3b and 1 encode simple contour features such as small oriented bars and edges, whereas higher order SII neurons represent large curved contour features such as angles and arcs. However, neural coding of these contour features has not been systematically characterized in area 2, the most caudal SI subdivision in the postcentral gyrus. In the present study, we analyzed area 2 neural responses to embossed oriented bars and curved contour fragments to establish whether curvature representations are generated in the postcentral gyrus. We found that many area 2 neurons (26 of 112) exhibit clear curvature tuning, preferring contours pointing in a particular direction. Fewer area 2 neurons (15 of 112) show preferences for oriented bars. Because area 2 response patterns closely resembled SII patterns, we also compared area 2 and SII response time courses to characterize the temporal dynamics of curvature synthesis in the somatosensory system. We found that curvature representations develop and peak concurrently in area 2 and SII. These results reveal that transitions from orientation tuning to curvature selectivity in the somatosensory cortical hierarchy occur within SI rather than between SI and SII. PMID:23536717
John Paul Wallace, Ganapati Rao Myneni, and Robert Pike
2011-03-01
The manufacturing of niobium SRF accelerator cavities is plagued by a mobile point defect, hydrogen. For efficient accelerator operation, niobium must function at both high electric and magnetic fields, and is compromised if magnetic impurities are located in the surface regions of the material. The finding that trace hydrogen in niobium can produce structures with magnetic properties is a feature that is not acceptable for a high performance cavity. X-ray diffraction has proved to be the key tool in assessing irreversible process damage to the niobium substrate. In future generations of accelerators, niobium will actually be merely the substrate for more effective superconductors that will allow for more efficient operation. The substrate analogy to the silicon wafer industry is useful since for niobium it may be possible to avoid some of the mistakes made in silicon technology. Because hydrogen attacks niobium on a number of different size scales, there is an inherent complexity in the trouble sources. There are also features in cavity design that are benign, such as local curvature considerations, requiring a fully non symmetric analysis of current flow to be appreciated.
Wallace, John Paul; Myneni, Ganapati Rao; Pike, Robert
2011-03-31
The manufacturing of niobium SRF accelerator cavities is plagued by a mobile point defect, hydrogen. For efficient accelerator operation, niobium must function at both high electric and magnetic fields, and is compromised if magnetic impurities are located in the surface regions of the material. The finding that trace hydrogen in niobium can produce structures with magnetic properties is a feature that is not acceptable for a high performance cavity. X-ray diffraction has proved to be the key tool in assessing irreversible process damage to the niobium substrate. In future generations of accelerators, niobium will actually be merely the substrate for more effective superconductors that will allow for more efficient operation. The substrate analogy to the silicon wafer industry is useful since for niobium it may be possible to avoid some of the mistakes made in silicon technology. Because hydrogen attacks niobium on a number of different size scales, there is an inherent complexity in the trouble sources. There are also features in cavity design that are benign, such as local curvature considerations, requiring a fully non symmetric analysis of current flow to be appreciated.
Cosmic curvature and condensation
NASA Technical Reports Server (NTRS)
Harwit, Martin
1992-01-01
It is shown that the universe may consist of a patchwork of domains with different Riemann curvature constants k = 0, +/-1. Features of a phase transition in which flat space breaks up in a transition 2k0 - k(-) + k(+) with initial scale factors R(-) = R(+) are postulated and explored. It is shown that such a transition is energetically permitted, has the equivalent of a Curie temperature, and can lead in a natural way to the formation of voids and galaxies. It is predicted that, if the ambient universe on average is well fitted by a purely k(-) space, with only occasional domains of k(+) containing galaxies, a density parameter of (A(z sub c + 1)) super -1 should be expected, where z sub c represents the redshift of the earliest objects to have condensed, and A takes on values ranging from about 5 to 3. Present observations of quasars would suggest a density of about 0.03 or 0.05, respectively, but it could be lower if earlier condensation took place.
Membrane-mediated aggregation of anisotropically curved nanoparticles.
Olinger, Alexander D; Spangler, Eric J; Kumar, P B Sunil; Laradji, Mohamed
2016-01-01
Using systematic numerical simulations, we study the self-assembly of elongated curved nanoparticles on lipid vesicles. Our simulations are based on molecular dynamics of a coarse-grained implicit-solvent model of self-assembled lipid membranes with a Langevin thermostat. Here we consider only the case wherein the nanoparticle-nanoparticle interaction is repulsive, only the concave surface of the nanoparticle interacts attractively with the lipid head groups and only the outer surface of the vesicle is exposed to the nanoparticles. Upon their adhesion on the vesicle, the curved nanoparticles generate local curvature on the membrane. The resulting nanoparticle-generated membrane curvature leads in turn to nanoparticle self-assembly into two main types of aggregates corresponding to chain aggregates at low adhesion strengths and aster aggregates at high adhesion strength. The chain-like aggregates are due to the fact that at low values of adhesion strength, the nanoparticles prefer to lie parallel to each other. As the adhesion strength is increased, a splay angle between the nanoparticles is induced with a magnitude that increases with increasing adhesion strength. The origin of the splay angles between the nanoparticles is shown to be saddle-like membrane deformations induced by a tilt of the lipids around the nanoparticles. This phenomenon of membrane mediated self-assembly of anisotropically curved nanoparticles is explored for systems with varying nanoparticle number densities, adhesion strength, and nanoparticle intrinsic curvature.
On the edge energy of lipid membranes and the thermodynamic stability of pores
Pera, H.; Kleijn, J. M.; Leermakers, F. A. M.
2015-01-21
To perform its barrier function, the lipid bilayer membrane requires a robust resistance against pore formation. Using a self-consistent field (SCF) theory and a molecularly detailed model for membranes composed of charged or zwitterionic lipids, it is possible to predict structural, mechanical, and thermodynamical parameters for relevant lipid bilayer membranes. We argue that the edge energy in membranes is a function of the spontaneous lipid monolayer curvature, the mean bending modulus, and the membrane thickness. An analytical Helfrich-like model suggests that most bilayers should have a positive edge energy. This means that there is a natural resistance against pore formation. Edge energies evaluated explicitly in a two-gradient SCF model are consistent with this. Remarkably, the edge energy can become negative for phosphatidylglycerol (e.g., dioleoylphosphoglycerol) bilayers at a sufficiently low ionic strength. Such bilayers become unstable against the formation of pores or the formation of lipid disks. In the weakly curved limit, we study the curvature dependence of the edge energy and evaluate the preferred edge curvature and the edge bending modulus. The latter is always positive, and the former increases with increasing ionic strength. These results point to a small window of ionic strengths for which stable pores can form as too low ionic strengths give rise to lipid disks. Higher order curvature terms are necessary to accurately predict relevant pore sizes in bilayers. The electric double layer overlap across a small pore widens the window of ionic strengths for which pores are stable.
Mechanisms of membrane deformation by lipid-binding domains.
Itoh, Toshiki; Takenawa, Tadaomi
2009-09-01
Among an increasing number of lipid-binding domains, a group that not only binds to membrane lipids but also changes the shape of the membrane has been found. These domains are characterized by their strong ability to transform globular liposomes as well as flat plasma membranes into elongated membrane tubules both in vitro and in vivo. Biochemical studies on the structures of these proteins have revealed the importance of the amphipathic helix, which potentially intercalates into the lipid bilayer to induce and/or sense membrane curvature. Among such membrane-deforming domains, BAR and F-BAR/EFC domains form crescent-shaped dimers, suggesting a preference for a curved membrane, which is important for curvature sensing. Bioinformatics in combination with structural analyses has been identifying an increasing number of novel families of lipid-binding domains. This review attempts to summarize the evidence obtained by recent studies in order to gain general insights into the roles of membrane-deforming domains in a variety of biological events.
Particles and curvatures in nematic liquid crystals
NASA Astrophysics Data System (ADS)
Serra, Francesca; Luo, Yimin; Yang, Shu; Kamien, Randall D.; Stebe, Kathleen J.
Elastic interactions in anisotropic fluids can be harnessed to direct particle interactions. A strategy to smoothly manipulate the director field in nematic liquid crystals is to vary the topography of the bounding surfaces. A rugged landscape with peaks and valleys create local deformations of the director field which can interact with particles in solution. We study this complex interaction in two different settings. The first consists of an array of shallow pores in a poly-dimethyl-siloxane (PDMS) membrane, whose curvature can be tuned either by swelling the PDMS membrane or by mechanical stretching. The second is a set of grooves with wavy walls, fabricated by photolithography, with various parameters of curvature and shapes. In this contexts we study how the motion of colloidal particles in nematic liquid crystals can be influenced by their interaction with the peaks and valleys of the bottom substrate or of the side walls. Particles with different associated topological defects (hedgehogs or Saturn rings) behave differently as they interact with the topographical features, favoring the docking on peaks or valleys. These experimental systems are also ideal to study the ``lock and key'' mechanism of particles in holes and to investigate a possible route for particle sorting.
Curvature Interaction in Collective Space
NASA Astrophysics Data System (ADS)
Herrmann, Richard
2012-12-01
For the Riemannian space, built from the collective coordinates used within nuclear models, an additional interaction with the metric is investigated, using the collective equivalent to Einstein's curvature scalar. The coupling strength is determined using a fit with the AME2003 ground state masses. An extended finite-range droplet model including curvature is introduced, which generates significant improvements for light nuclei and nuclei in the trans-fermium region.
Spatial curvature endgame: Reaching the limit of curvature determination
NASA Astrophysics Data System (ADS)
Leonard, C. Danielle; Bull, Philip; Allison, Rupert
2016-07-01
Current constraints on spatial curvature show that it is dynamically negligible: |ΩK|≲5 ×10-3 (95% C.L.). Neglecting it as a cosmological parameter would be premature however, as more stringent constraints on ΩK at around the 10-4 level would offer valuable tests of eternal inflation models and probe novel large-scale structure phenomena. This precision also represents the "curvature floor," beyond which constraints cannot be meaningfully improved due to the cosmic variance of horizon-scale perturbations. In this paper, we discuss what future experiments will need to do in order to measure spatial curvature to this maximum accuracy. Our conservative forecasts show that the curvature floor is unreachable—by an order of magnitude—even with Stage IV experiments, unless strong assumptions are made about dark energy evolution and the Λ CDM parameter values. We also discuss some of the novel problems that arise when attempting to constrain a global cosmological parameter like ΩK with such high precision. Measuring curvature down to this level would be an important validation of systematics characterization in high-precision cosmological analyses.
NASA Astrophysics Data System (ADS)
Kim, Dae Seok; Cha, Yun Jeong; Kim, Mun Ho; Lavrentovich, Oleg D.; Yoon, Dong Ki
2016-01-01
Soft materials with layered structure such as membranes, block copolymers and smectics exhibit intriguing morphologies with nontrivial curvatures. Here, we report restructuring the Gaussian and mean curvatures of smectic A films with free surface in the process of sintering, that is, reshaping at elevated temperatures. The pattern of alternating patches of negative, zero and positive mean curvature of the air-smectic interface has a profound effect on the rate of sublimation. As a result of sublimation, condensation and restructuring, initially equilibrium smectic films with negative and zero Gaussian curvature are transformed into structures with pronounced positive Gaussian curvature of layers packing, which are rare in the samples obtained by cooling from the isotropic melt. The observed relationship between the curvatures, bulk elastic behaviour and interfacial geometries in sintering of smectic liquid crystals might pave the way for new approaches to control soft morphologies at micron and submicron scales.
Spatial curvature falsifies eternal inflation
Kleban, Matthew; Schillo, Marjorie E-mail: mls604@nyu.edu
2012-06-01
Inflation creates large-scale cosmological density perturbations that are characterized by an isotropic, homogeneous, and Gaussian random distribution about a locally flat background. Even in a flat universe, the spatial curvature measured within one Hubble volume receives contributions from long wavelength perturbations, and will not in general be zero. These same perturbations determine the Cosmic Microwave Background (CMB) temperature fluctuations, which are O(10{sup −5}). Consequently, the low-l multipole moments in the CMB temperature map predict the value of the measured spatial curvature Ω{sub k}. On this basis we argue that a measurement of |Ω{sub k}| > 10{sup −4} would rule out slow-roll eternal inflation in our past with high confidence, while a measurement of Ω{sub k} < −10{sup −4} (which is positive curvature, a locally closed universe) rules out false-vacuum eternal inflation as well, at the same confidence level. In other words, negative curvature (a locally open universe) is consistent with false-vacuum eternal inflation but not with slow-roll eternal inflation, and positive curvature falsifies both. Near-future experiments will dramatically extend the sensitivity of Ω{sub k} measurements and constitute a sharp test of these predictions.
On the Weyl curvature hypothesis
Stoica, Ovidiu Cristinel
2013-11-15
The Weyl curvature hypothesis of Penrose attempts to explain the high homogeneity and isotropy, and the very low entropy of the early universe, by conjecturing the vanishing of the Weyl tensor at the Big-Bang singularity. In previous papers it has been proposed an equivalent form of Einstein’s equation, which extends it and remains valid at an important class of singularities (including in particular the Schwarzschild, FLRW, and isotropic singularities). Here it is shown that if the Big-Bang singularity is from this class, it also satisfies the Weyl curvature hypothesis. As an application, we study a very general example of cosmological models, which generalizes the FLRW model by dropping the isotropy and homogeneity constraints. This model also generalizes isotropic singularities, and a class of singularities occurring in Bianchi cosmologies. We show that the Big-Bang singularity of this model is of the type under consideration, and satisfies therefore the Weyl curvature hypothesis. -- Highlights: •The singularities we introduce are described by finite geometric/physical objects. •Our singularities have smooth Riemann and Weyl curvatures. •We show they satisfy Penrose’s Weyl curvature hypothesis (Weyl=0 at singularities). •Examples: FLRW, isotropic singularities, an extension of Schwarzschild’s metric. •Example: a large class of singularities which may be anisotropic and inhomogeneous.
Curvature generation in nematic surfaces
NASA Astrophysics Data System (ADS)
Mostajeran, Cyrus
2015-06-01
In recent years there has been a growing interest in the study of shape formation using modern responsive materials that can be preprogrammed to undergo spatially inhomogeneous local deformations. In particular, nematic liquid crystalline solids offer exciting possibilities in this context. Considerable recent progress has been made in achieving a variety of shape transitions in thin sheets of nematic solids by engineering isolated points of concentrated Gaussian curvature using topological defects in the nematic director field across textured surfaces. In this paper, we consider ways of achieving shape transitions in thin sheets of nematic glass by generation of nonlocalized Gaussian curvature in the absence of topological defects in the director field. We show how one can blueprint any desired Gaussian curvature in a thin nematic sheet by controlling the nematic alignment angle across the surface and highlight specific patterns which present feasible initial targets for experimental verification of the theory.
Lateral organization of membranes and cell shapes.
Markin, V S
1981-01-01
The relations among membrane structure, mechanical properties, and cell shape have been investigated. The fluid mosaic membrane models used contains several components that move freely in the membrane plane. These components interact with each other and determine properties of the membrane such as curvature and elasticity. A free energy equation is postulated for such a multicomponent membrane and the condition of free energy minimum is used to obtain differential equations relating the distribution of membrane components and the local membrane curvature. The force that moves membrane components along the membrane in a variable curvature field is calculated. A change in the intramembrane interactions can bring about phase separation or particle clustering. This, in turn, may strongly affect the local curvature. The numerical solution of the set of equations for the two dimensional case allows determination of the cell shape and the component distribution along the membrane. The model has been applied to describe certain erythrocytes shape transformations. PMID:7284547
The role of curvature in silica mesoporous crystals
Miyasaka, Keiichi; Garcia Bennett, Alfonso; Han, Lu; Han, Yu; Xiao, Changhong; Fujita, Nobuhisa; Castle, Toen; Sakamoto, Yasuhiro; Che, Shunai; Terasaki, Osamu
2012-01-01
Silica mesoporous crystals (SMCs) offer a unique opportunity to study micellar mesophases. Replication of non-equilibrium mesophases into porous silica structures allows the characterization of surfactant phases under a variety of chemical and physical perturbations, through methods not typically accessible to liquid crystal chemists. A poignant example is the use of electron microscopy and crystallography, as discussed herein, for the purpose of determining the fundamental role of amphiphile curvature, namely mean curvature and Gaussian curvature, which have been extensively studied in various fields such as polymer, liquid crystal, biological membrane, etc. The present work aims to highlight some current studies devoted to the interface curvature on SMCs, in which electron microscopy and electron crystallography (EC) are used to understand the geometry of silica wall surface in bicontinuous and cage-type mesostructures through the investigation of electrostatic potential maps. Additionally, we show that by altering the synthesis conditions during the preparation of SMCs, it is possible to isolate particles during micellar mesophase transformations in the cubic bicontinuous system, allowing us to view and study epitaxial relations under the specific synthesis conditions. By studying the relationship between mesoporous structure, interface curvature and micellar mesophases using electron microscopy and EC, we hope to bring new insights into the formation mechanism of these unique materials but also contribute a new way of understanding periodic liquid crystal systems. PMID:24098848
Lipid shape is a key factor for membrane interactions of amphipathic helical peptides.
Strandberg, Erik; Tiltak, Deniz; Ehni, Sebastian; Wadhwani, Parvesh; Ulrich, Anne S
2012-07-01
The membrane alignment of the amphiphilic alpha-helical model peptide MSI-103 (sequence [KIAGKIA]3-NH2) was examined by solid state 2H-NMR in different lipid systems by systematically varying the acyl chain length and degree of saturation, the lipid head group type, and the peptide-to-lipid molar ratio. In liquid crystalline phosphatidylcholine (PC) lipids with saturated chains, the amphiphilic helix changes its orientation from a surface-bound "S-state" to a tilted "T-state" with increasing peptide concentration. In PC lipids with unsaturated chains, on the other hand, the S-state is found throughout all concentrations. Using phosphatidylethanolamine lipids with a small head group or by addition of lyso-lipids with only one acyl chain, the spontaneous curvature of the bilayer was purposefully changed. In the first case with a negative curvature only the S-state was found, whereas in systems with a positive curvature the peptide preferred the obliquely immersed T-state at high concentration. The orientation of MSI-103 thus correlates very well with the shape of the lipid molecules constituting the membrane. Lipid charge, on the other hand, was found to affect only the initial electrostatic attraction to the membrane surface but not the alignment preferences. In bilayers that are "sealed" with 20% cholesterol, MSI-103 cannot bind in a well-oriented manner and forms immobilized aggregates instead. We conclude that the curvature properties of a membrane are a key factor in the interactions of amphiphilic helical peptides in general, whose re-alignment and immersion preferences may thus be inferred in a straightforward manner from the lipid-shape concept.
Ménager, Christine; Guemghar, Dihya; Cabuil, Valérie; Lesieur, Sylviane
2010-10-05
The present study deals with the morphological modifications of giant dioleoyl phosphatidylcholine vesicles (DOPC GUVs) induced by the nonionic surfactant n-octyl β,D-glucopyranoside at sublytic levels, i.e., in the first steps of the vesicle-to-micelle transition process, when surfactant inserts into the vesicle bilayer without disruption. Experimental conditions were perfected to exactly control the surfactant bilayer composition of the vesicles, in line with former work focused on the mechanical properties of the membrane of magnetic-fluid-loaded DOPC GUVs submitted to a magnetic field. The purpose here was to systematically examine, in the absence of any external mechanical constraint, the dynamics of giant vesicle shape and membrane deformations as a function of surfactant partitioning between the aqueous phase and the lipid membrane, beforehand established by turbidity measurements from small unilamellar vesicles.
Space Curvature and the "Heavy Banana 'Paradox.'"
ERIC Educational Resources Information Center
Gruber, Ronald P.; And Others
1991-01-01
Two ways to visually enhance the concept of space curvature are described. Viewing space curvature as a meterstick contraction and the heavy banana "paradox" are discussed. The meterstick contraction is mathematically explained. (KR)
Barenboim, Gabriela; Martínez, Enrique Fernández; Mena, Olga; Verde, Licia E-mail: enfmarti@mppmu.mpg.de E-mail: liciaverde@icc.ub.edu
2010-03-01
Geometrical tests such as the combination of the Hubble parameter H(z) and the angular diameter distance d{sub A}(z) can, in principle, break the degeneracy between the dark energy equation of state parameter w(z), and the spatial curvature Ω{sub k} in a direct, model-independent way. In practice, constraints on these quantities achievable from realistic experiments, such as those to be provided by Baryon Acoustic Oscillation (BAO) galaxy surveys in combination with CMB data, can resolve the cosmic confusion between the dark energy equation of state parameter and curvature only statistically and within a parameterized model for w(z). Combining measurements of both H(z) and d{sub A}(z) up to sufficiently high redshifts z ∼ 2 and employing a parameterization of the redshift evolution of the dark energy equation of state are the keys to resolve the w(z)−Ω{sub k} degeneracy.
Curvatures Estimation in Orientation Selection
1991-01-31
than is-obtained in length-tuning measurements . Hence, over a limited range, increasing the size or gain of the small RF has a similar effect . The...the remaining larger, lower curvature units to represent the curve. An indirect test involves measuring the time for the effect to set in, with and...31Jan 91 By, Steen .Zcke * ax . Cnadr tDistribution/ Steen .Zcke *MaxS. ynaer ~ Availability Codes Dist Special Computer Vision and Robotics Laboratory
Quantum complexity and negative curvature
NASA Astrophysics Data System (ADS)
Brown, Adam R.; Susskind, Leonard; Zhao, Ying
2017-02-01
As time passes, once simple quantum states tend to become more complex. For strongly coupled k -local Hamiltonians, this growth of computational complexity has been conjectured to follow a distinctive and universal pattern. In this paper we show that the same pattern is exhibited by a much simpler system—classical geodesics on a compact two-dimensional geometry of uniform negative curvature. This striking parallel persists whether the system is allowed to evolve naturally or is perturbed from the outside.
Disformal invariance of curvature perturbation
Motohashi, Hayato; White, Jonathan E-mail: jwhite@post.kek.jp
2016-02-01
We show that under a general disformal transformation the linear comoving curvature perturbation is not identically invariant, but is invariant on superhorizon scales for any theory that is disformally related to Horndeski's theory. The difference between disformally related curvature perturbations is found to be given in terms of the comoving density perturbation associated with a single canonical scalar field. In General Relativity it is well-known that this quantity vanishes on superhorizon scales through the Poisson equation that is obtained on combining the Hamiltonian and momentum constraints, and we confirm that a similar result holds for any theory that is disformally related to Horndeski's scalar-tensor theory so long as the invertibility condition for the disformal transformation is satisfied. We also consider the curvature perturbation at full nonlinear order in the unitary gauge, and find that it is invariant under a general disformal transformation if we assume that an attractor regime has been reached. Finally, we also discuss the counting of degrees of freedom in theories disformally related to Horndeski's.
Shape and curvature error estimation in polished surfaces of ground glass molds
NASA Astrophysics Data System (ADS)
Savio, Gianpaolo; Pal, Raj Kumar; Meneghello, Roberto; D'Angelo, Luciano; Concheri, Gianmaria
2017-02-01
In the fabrication process of aspheric glass lens and molds, shape characterization is a fundamental task to control geometrical errors. Nevertheless, the more significant geometrical functional aspect related to the optical properties is the curvature, which is rarely investigated in the manufacturing process of lenses. Algorithms for the assessment of shape and curvature errors on aspheric surface profile are presented. The method has been investigated on profiles measured before and at different steps of the membrane polishing process. The results show how surface roughness, shape, and curvature change during the polishing process as a function of the machining time.
Origins of chemoreceptor curvature sorting in Escherichia coli
Draper, Will; Liphardt, Jan
2017-01-01
Bacterial chemoreceptors organize into large clusters at the cell poles. Despite a wealth of structural and biochemical information on the system's components, it is not clear how chemoreceptor clusters are reliably targeted to the cell pole. Here, we quantify the curvature-dependent localization of chemoreceptors in live cells by artificially deforming growing cells of Escherichia coli in curved agar microchambers, and find that chemoreceptor cluster localization is highly sensitive to membrane curvature. Through analysis of multiple mutants, we conclude that curvature sensitivity is intrinsic to chemoreceptor trimers-of-dimers, and results from conformational entropy within the trimer-of-dimers geometry. We use the principles of the conformational entropy model to engineer curvature sensitivity into a series of multi-component synthetic protein complexes. When expressed in E. coli, the synthetic complexes form large polar clusters, and a complex with inverted geometry avoids the cell poles. This demonstrates the successful rational design of both polar and anti-polar clustering, and provides a synthetic platform on which to build new systems. PMID:28322223
Proteins interacting with Membranes: Protein Sorting and Membrane Shaping
NASA Astrophysics Data System (ADS)
Callan-Jones, Andrew
2015-03-01
Membrane-bound transport in cells requires generating membrane curvature. In addition, transport is selective, in order to establish spatial gradients of membrane components in the cell. The mechanisms underlying cell membrane shaping by proteins and the influence of curvature on membrane composition are active areas of study in cell biophysics. In vitro approaches using Giant Unilamellar Vesicles (GUVs) are a useful tool to identify the physical mechanisms that drive sorting of membrane components and membrane shape change by proteins. I will present recent work on the curvature sensing and generation of IRSp53, a protein belonging to the BAR family, whose members, sharing a banana-shaped backbone, are involved in endocytosis. Pulling membrane tubes with 10-100 nm radii from GUVs containing encapsulated IRSp53 have, unexpectedly, revealed a non-monotonic dependence of the protein concentration on the tube as a function of curvature. Experiments also show that bound proteins alter the tube mechanics and that protein phase separation along the tube occurs at low tensions. I will present accompanying theoretical work that can explain these findings based on the competition between the protein's intrinsic curvature and the effective rigidity of a membrane-protein patch.
The curvature elastic-energy function of the lipid-water cubic mesophase
NASA Astrophysics Data System (ADS)
Chung, Hesson; Caffrey, Martin
1994-03-01
CELL and lipid membranes are able to bend, as manifested during membrane fusion and the formation of non-lamellar lyotropic mesopbases in water. But there is an energy cost to bending of lipid layers, called the curvature elastic energy. Although the functional form of this energy is known1, a complete quantitative knowledge of the curvature elastic energy, which is central to predicting the relative stability of the large number of phases that lipid membranes can adopt, has been lacking. Here we use X-ray synchrotron diffraction measurements of the variation of lattice parameter with pressure and temperature for the periodic Ia3d (Q230) cubic phase of hydrated monoolein to calculate the complete curvature elastic-energy function for the lipid cubic mesophase. This allows us to predict the stabilities of different cubic and lamellar phases for this system as a function of composition.
Mirror with thermally controlled radius of curvature
Neil, George R.; Shinn, Michelle D.
2010-06-22
A radius of curvature controlled mirror for controlling precisely the focal point of a laser beam or other light beam. The radius of curvature controlled mirror provides nearly spherical distortion of the mirror in response to differential expansion between the front and rear surfaces of the mirror. The radius of curvature controlled mirror compensates for changes in other optical components due to heating or other physical changes. The radius of curvature controlled mirror includes an arrangement for adjusting the temperature of the front surface and separately adjusting the temperature of the rear surface to control the radius of curvature. The temperature adjustment arrangements can include cooling channels within the mirror body or convection of a gas upon the surface of the mirror. A control system controls the differential expansion between the front and rear surfaces to achieve the desired radius of curvature.
ERIC Educational Resources Information Center
National Commission on the Observance of International Women's Year, Washington, DC.
This document considers sexual preference as it specifically relates to women. Divided into two parts, the document presents a fact sheet about lesbianism and contains a workshop resource guide on sexual preference. The fact sheet, arranged in a question-answer format, focuses on the following concerns: (1) lesbianism as a woman's issue; (2) legal…
Radius of curvature controlled mirror
Neil, George R.; Rathke, John Wickham; Schultheiss, Thomas John; Shinn, Michelle D.; Dillon-Townes, Lawrence A.
2006-01-17
A controlled radius of curvature mirror assembly comprising: a distortable mirror having a reflective surface and a rear surface; and in descending order from the rear surface; a counter-distortion plate; a flow diverter having a flow diverter aperture at the center thereof; a flow return plate having a flow return aperture at the center thereof; a thermal isolation plate having a thermal isolation plate aperture at the center thereof and a flexible heater having a rear surface and a flexible heater aperture at the center thereof; a double walled tube defining a coolant feed chamber and a coolant return chamber; said coolant feed chamber extending to and through the flow diverter aperture and terminating at the counter-distortion plate and the coolant return chamber extending to and through the thermal isolation backplate and terminating at the flow diverter; and a coolant feed and a coolant return exit at the rear of said flexible heater.
Continuum electromechanical modeling of protein-membrane interactions.
Zhou, Y C; Lu, Benzhuo; Gorfe, Alemayehu A
2010-10-01
A continuum electromechanical model is proposed to describe the membrane curvature induced by electrostatic interactions in a solvated protein-membrane system. The model couples the macroscopic strain energy of membrane and the electrostatic solvation energy of the system, and equilibrium membrane deformation is obtained by minimizing the electroelastic energy functional with respect to the dielectric interface. The model is illustrated with the systems with increasing geometry complexity and captures the sensitivity of membrane curvature to the permanent and mobile charge distributions.
Determining wave direction using curvature parameters.
de Queiroz, Eduardo Vitarelli; de Carvalho, João Luiz Baptista
2016-01-01
The curvature of the sea wave was tested as a parameter for estimating wave direction in the search for better results in estimates of wave direction in shallow waters, where waves of different sizes, frequencies and directions intersect and it is difficult to characterize. We used numerical simulations of the sea surface to determine wave direction calculated from the curvature of the waves. Using 1000 numerical simulations, the statistical variability of the wave direction was determined. The results showed good performance by the curvature parameter for estimating wave direction. Accuracy in the estimates was improved by including wave slope parameters in addition to curvature. The results indicate that the curvature is a promising technique to estimate wave directions.•In this study, the accuracy and precision of curvature parameters to measure wave direction are analyzed using a model simulation that generates 1000 wave records with directional resolution.•The model allows the simultaneous simulation of time-series wave properties such as sea surface elevation, slope and curvature and they were used to analyze the variability of estimated directions.•The simultaneous acquisition of slope and curvature parameters can contribute to estimates wave direction, thus increasing accuracy and precision of results.
Streamline curvature effects on turbulent boundary layers
NASA Technical Reports Server (NTRS)
Wilcox, D. C.; Chambers, T. L.
1976-01-01
A theoretical tool has been developed for predicting, in a nonempirical manner, effects of streamline curvature and coordinate-system rotation on turbulent boundary layers. The second-order closure scheme developed by Wilcox and Traci has been generalized for curved streamline flow and for flow in a rotating coordinate system. A physically based straightforward argument shows that curvature/rotation primarily affects the turbulent mixing energy; the argument yields suitable curvature/rotation terms which are added to the mixing-energy equation. Singular-perturbation solutions valid in the wall layer of a curved-wall boundary layer and a fully developed rotating channel flow demonstrate that, with the curvature/rotation terms, the model predicts the curved-wall and the rotating coordinate system laws of the wall. Results of numerical computations of curved-wall boundary layers and of rotating channel flow show that curvature/rotation effects can be computed accurately with second-order closure.
Gao, Dengliang
2013-03-01
In 3D seismic interpretation, curvature is a popular attribute that depicts the geometry of seismic reflectors and has been widely used to detect faults in the subsurface; however, it provides only part of the solutions to subsurface structure analysis. This study extends the curvature algorithm to a new curvature gradient algorithm, and integrates both algorithms for fracture detection using a 3D seismic test data set over Teapot Dome (Wyoming). In fractured reservoirs at Teapot Dome known to be formed by tectonic folding and faulting, curvature helps define the crestal portion of the reservoirs that is associated with strong seismic amplitude and high oil productivity. In contrast, curvature gradient helps better define the regional northwest-trending and the cross-regional northeast-trending lineaments that are associated with weak seismic amplitude and low oil productivity. In concert with previous reports from image logs, cores, and outcrops, the current study based on an integrated seismic curvature and curvature gradient analysis suggests that curvature might help define areas of enhanced potential to form tensile fractures, whereas curvature gradient might help define zones of enhanced potential to develop shear fractures. In certain fractured reservoirs such as at Teapot Dome where faulting and fault-related folding contribute dominantly to the formation and evolution of fractures, curvature and curvature gradient attributes can be potentially applied to differentiate fracture mode, to predict fracture intensity and orientation, to detect fracture volume and connectivity, and to model fracture networks.
Magnetophoretic Induction of Root Curvature
NASA Technical Reports Server (NTRS)
Hasenstein, Karl H.
1997-01-01
The last year of the grant period concerned the consolidation of previous experiments to ascertain that the theoretical premise apply not just to root but also to shoots. In addition, we verified that high gradient magnetic fields do not interfere with regular cellular activities. Previous results have established that: (1) intracellular magnetophoresis is possible; and (2) HGMF lead to root curvature. In order to investigate whether HGMF affect the assembly and/or organization of structural proteins, we examined the arrangement of microtubules in roots exposed to HGMF. The cytoskeletal investigations were performed with fomaldehyde-fixed, nonembedded tissue segments that were cut with a vibratome. Microtubules (MTs) were stained with rat anti-yeast tubulin (YOL 1/34) and DTAF-labeled antibody against rat IgG. Microfilaments (MFs) were visualized by incubation in rhodamine-labeled phalloidin. The distribution and arrangement of both components of the cytoskeleton were examined with a confocal microscope. Measurements of growth rates and graviresponse were done using a video-digitizer. Since HGMF repel diamagnetic substances including starch-filled amyloplasts and most The second aspect of the work includes studies of the effect of cytoskeletal inhibitors on MTs and MFs. The analysis of the effect of micotubular inhibitors on the auxin transport in roots showed that there is very little effect of MT-depolymerizing or stabilizing drugs on auxin transport. This is in line with observations that application of such drugs is not immediately affecting the graviresponsiveness of roots.
Programming curvature using origami tessellations
NASA Astrophysics Data System (ADS)
Dudte, Levi H.; Vouga, Etienne; Tachi, Tomohiro; Mahadevan, L.
2016-05-01
Origami describes rules for creating folded structures from patterns on a flat sheet, but does not prescribe how patterns can be designed to fit target shapes. Here, starting from the simplest periodic origami pattern that yields one-degree-of-freedom collapsible structures--we show that scale-independent elementary geometric constructions and constrained optimization algorithms can be used to determine spatially modulated patterns that yield approximations to given surfaces of constant or varying curvature. Paper models confirm the feasibility of our calculations. We also assess the difficulty of realizing these geometric structures by quantifying the energetic barrier that separates the metastable flat and folded states. Moreover, we characterize the trade-off between the accuracy to which the pattern conforms to the target surface, and the effort associated with creating finer folds. Our approach enables the tailoring of origami patterns to drape complex surfaces independent of absolute scale, as well as the quantification of the energetic and material cost of doing so.
Ionic liquid tunes microemulsion curvature.
Liu, Liping; Bauduin, Pierre; Zemb, Thomas; Eastoe, Julian; Hao, Jingcheng
2009-02-17
Middle-phase microemulsions formed from cationic dioctadecyldimethylammonium chloride (DODMAC), anionic sodium dodecylsulfate (SDS), n-butanol, and n-heptane were studied. An ionic liquid (IL), 1-butyl-3-methylimidazolium tetrafluoroborate ([bmim][BF4]), was employed as the electrolyte in the aqueous media instead of inorganic salts usually used in microemulsion formulation. Studies have been carried out as a function of the concentrations of [bmim][BF4], n-butanol, total surfactant (cDODMAC+SDS), and temperature on the phase behavior and the ultralow interfacial tensions in which the anionic component is present in excess in the catanionic film. Ultralow interfacial tension measurements confirmed the formation of middle-phase microemulsions and the necessary conditions for stabilizing middle-phase microemulsions. Electrical conductivity, small-angle X-ray scattering (SAXS), and small-angle neutron scattering (SANS) experiments were also performed, indicating that the typical heptane domain size has an average radius of 360 A and the ionic liquid induces softening of the charged catanionic film. Most interestingly, the IL concentration (cIL) is shown to act as an effective interfacial curvature-control parameter, representing a new approach to tuning the formulation of microemulsions and emulsions. The results expand the potential uses of ILs but also point to the design of new ILs that may achieve superefficient control over interfacial and self-assembly systems.
Curvature function and coarse graining
Diaz-Marin, Homero; Zapata, Jose A.
2010-12-15
A classic theorem in the theory of connections on principal fiber bundles states that the evaluation of all holonomy functions gives enough information to characterize the bundle structure (among those sharing the same structure group and base manifold) and the connection up to a bundle equivalence map. This result and other important properties of holonomy functions have encouraged their use as the primary ingredient for the construction of families of quantum gauge theories. However, in these applications often the set of holonomy functions used is a discrete proper subset of the set of holonomy functions needed for the characterization theorem to hold. We show that the evaluation of a discrete set of holonomy functions does not characterize the bundle and does not constrain the connection modulo gauge appropriately. We exhibit a discrete set of functions of the connection and prove that in the abelian case their evaluation characterizes the bundle structure (up to equivalence), and constrains the connection modulo gauge up to ''local details'' ignored when working at a given scale. The main ingredient is the Lie algebra valued curvature function F{sub S}(A) defined below. It covers the holonomy function in the sense that expF{sub S}(A)=Hol(l={partial_derivative}S,A).
Curvature-driven capillary migration and assembly of rod-like particles.
Cavallaro, Marcello; Botto, Lorenzo; Lewandowski, Eric P; Wang, Marisa; Stebe, Kathleen J
2011-12-27
Capillarity can be used to direct anisotropic colloidal particles to precise locations and to orient them by using interface curvature as an applied field. We show this in experiments in which the shape of the interface is molded by pinning to vertical pillars of different cross-sections. These interfaces present well-defined curvature fields that orient and steer particles along complex trajectories. Trajectories and orientations are predicted by a theoretical model in which capillary forces and torques are related to Gaussian curvature gradients and angular deviations from principal directions of curvature. Interface curvature diverges near sharp boundaries, similar to an electric field near a pointed conductor. We exploit this feature to induce migration and assembly at preferred locations, and to create complex structures. We also report a repulsive interaction, in which microparticles move away from planar bounding walls along curvature gradient contours. These phenomena should be widely useful in the directed assembly of micro- and nanoparticles with potential application in the fabrication of materials with tunable mechanical or electronic properties, in emulsion production, and in encapsulation.
Curvature in solid oxide fuel cells
NASA Astrophysics Data System (ADS)
Li, Wenxia; Hasinska, Kathy; Seabaugh, Matt; Swartz, Scott; Lannutti, John
At this point in history, curvature is inherent to the laminated components that comprise solid oxide fuel cells (SOFCs). Surprisingly, however, this fact has never been previously quantified in the literature. In addition, potential curvature changes associated with NiO reduction and re-oxidation during operation have not been investigated. In this report, an optical profilometer was employed to non-destructively quantify the surface curvature or cracking behavior observed on a large scale in industrially manufactured cells. This provides insights into the challenges that the component materials face as well as additional appreciation for why, in spite of a concerted effort to commercialize SOFC power generation, all currently manufactured SOFC stacks fail. Our results demonstrate that cracked electrolyte areas (caused by differential sintering) are flatter than uncracked regions. The height of the electrolyte surface ranged from 86 to 289 μm above the baseline following sintering. Reduction typically results in increases in curvature of up to 214 μm. Initial crack density appears to affect curvature evolution during reduction; the higher the crack density, the smaller the curvature increase following reduction at 600 °C. In general, however, we observed that the electrolyte layer is remarkably resistant to further cracking during these typographic changes. Following oxidation at 750 °C, large changes in curvature (up to 280 μm) are noted that appear to be related to the strength of the bond between the electrolyte and the underlying anode.
Curvature and torsion in growing actin networks
Shaevitz, Joshua W; Fletcher, Daniel A
2011-01-01
Intracellular pathogens such as Listeria monocytogenes and Rickettsia rickettsii move within a host cell by polymerizing a comet-tail of actin fibers that ultimately pushes the cell forward. This dense network of cross-linked actin polymers typically exhibits a striking curvature that causes bacteria to move in gently looping paths. Theoretically, tail curvature has been linked to details of motility by considering force and torque balances from a finite number of polymerizing filaments. Here we track beads coated with a prokaryotic activator of actin polymerization in three dimensions to directly quantify the curvature and torsion of bead motility paths. We find that bead paths are more likely to have low rather than high curvature at any given time. Furthermore, path curvature changes very slowly in time, with an autocorrelation decay time of 200 s. Paths with a small radius of curvature, therefore, remain so for an extended period resulting in loops when confined to two dimensions. When allowed to explore a three-dimensional (3D) space, path loops are less evident. Finally, we quantify the torsion in the bead paths and show that beads do not exhibit a significant left- or right-handed bias to their motion in 3D. These results suggest that paths of actin-propelled objects may be attributed to slow changes in curvature, possibly associated with filament debranching, rather than a fixed torque. PMID:18560043
Curvature and torsion in growing actin networks
NASA Astrophysics Data System (ADS)
Shaevitz, Joshua W.; Fletcher, Daniel A.
2008-06-01
Intracellular pathogens such as Listeria monocytogenes and Rickettsia rickettsii move within a host cell by polymerizing a comet-tail of actin fibers that ultimately pushes the cell forward. This dense network of cross-linked actin polymers typically exhibits a striking curvature that causes bacteria to move in gently looping paths. Theoretically, tail curvature has been linked to details of motility by considering force and torque balances from a finite number of polymerizing filaments. Here we track beads coated with a prokaryotic activator of actin polymerization in three dimensions to directly quantify the curvature and torsion of bead motility paths. We find that bead paths are more likely to have low rather than high curvature at any given time. Furthermore, path curvature changes very slowly in time, with an autocorrelation decay time of 200 s. Paths with a small radius of curvature, therefore, remain so for an extended period resulting in loops when confined to two dimensions. When allowed to explore a three-dimensional (3D) space, path loops are less evident. Finally, we quantify the torsion in the bead paths and show that beads do not exhibit a significant left- or right-handed bias to their motion in 3D. These results suggest that paths of actin-propelled objects may be attributed to slow changes in curvature, possibly associated with filament debranching, rather than a fixed torque.
Conformation of charged vesicles: the Debye Huckel and the low curvature limit
NASA Astrophysics Data System (ADS)
Sinha, Kumari Priti; Thaokar, Rochish M., , Prof.
The shape as well as tension and pressure inside an uncharged vesicle are determined by the reduced volume. These parameters are important for a vesicle or a biological cell, since it can affect bio-physical processes such as osmosis and permeation, interaction with external agents such as bio- macromolecules and thermal fluctuations of the bilayer membrane of a vesicle. Charged membranes are ubiquitous in nature, most biological cell bio-membranes are charged, and therefore the knowledge of shape, tension and pressure of charged vesicles is critical. Additionally, the distribution of charges in the inner and outer leaflets is also important as it can affect the spatial interaction of a bilayer membrane with proteins. This work addresses these issues in the low charge and curvature limit. Our analysis indicates that despite a very strong two-way coupling between the charge and the curvature, the shapes of charged vesicles remain similar to that of uncharged vesicles at comparable reduced volumes, even for reasonable values of total charge. However, the tension and pressure values are higher, and are accurately estimated. Similarly the charge distribution on the outer and inner leaflet is strongly affected by the curvature. The value of spontaneous curvature due to charge redistribution is estimated. The insensitivity of the shape to charges persists even when only the outer leaflet is charged instead of charged inner and outer leaflets
Impact of curvature on topological defects
NASA Astrophysics Data System (ADS)
Mesarec, L.; Góźdź, W.; Iglič, A.; Kralj, S.
2017-01-01
We analyze the impact of extrinsic and intrinsic curvature on positions of topological defects (TDs) in two-dimensional (2D) nematic films. We demonstrate that both these curvature contributions are commonly present and are expected to be weighted by comparable elastic constants. A simple Landau-de Gennes approach in terms of tensor nematic order parameter is used to numerically demonstrate impact of the curvatures on position of TDs on 2D ellipsoidal nematic shells. In particular, in oblate ellipsoids the extrinsic and intrinsic elastic terms enforce conflicting tendencies to positions of TDs.
Bender, Ruben R.; Muth, Anke; Schneider, Irene C.; Friedel, Thorsten; Hartmann, Jessica; Plückthun, Andreas; Maisner, Andrea; Buchholz, Christian J.
2016-01-01
Receptor-targeted lentiviral vectors (LVs) can be an effective tool for selective transfer of genes into distinct cell types of choice. Moreover, they can be used to determine the molecular properties that cell surface proteins must fulfill to act as receptors for viral glycoproteins. Here we show that LVs pseudotyped with receptor-targeted Nipah virus (NiV) glycoproteins effectively enter into cells when they use cell surface proteins as receptors that bring them closely enough to the cell membrane (less than 100 Å distance). Then, they were flexible in receptor usage as demonstrated by successful targeting of EpCAM, CD20, and CD8, and as selective as LVs pseudotyped with receptor-targeted measles virus (MV) glycoproteins, the current standard for cell-type specific gene delivery. Remarkably, NiV-LVs could be produced at up to two orders of magnitude higher titers compared to their MV-based counterparts and were at least 10,000-fold less effectively neutralized than MV glycoprotein pseudotyped LVs by pooled human intravenous immunoglobulin. An important finding for NiV-LVs targeted to Her2/neu was an about 100-fold higher gene transfer activity when particles were targeted to membrane-proximal regions as compared to particles binding to a more membrane-distal epitope. Likewise, the low gene transfer activity mediated by NiV-LV particles bound to the membrane distal domains of CD117 or the glutamate receptor subunit 4 (GluA4) was substantially enhanced by reducing receptor size to below 100 Å. Overall, the data suggest that the NiV glycoproteins are optimally suited for cell-type specific gene delivery with LVs and, in addition, for the first time define which parts of a cell surface protein should be targeted to achieve optimal gene transfer rates with receptor-targeted LVs. PMID:27281338
Helical Microfilaments with Alternating Imprinted Intrinsic Curvatures.
Silva, Pedro Emanuel Santos; Godinho, Maria Helena
2017-03-01
There has been an intense research for developing techniques that can produce filaments with helical shapes, given the widespread of potential applications. In this work, how helices with different curvatures can be precisely imprinted in microfilaments is shown. It is also shown that using this technique, it is possible to produce, in a single fiber, helices with different curvatures. This striking and innovative behavior is observed when one side of the stretched filaments is irradiated with UV light, modifying the mechanical properties at surface. Upon release, the regions with higher curvature start to curl first, while regions with lower intrinsic curvature remain stretched until start to curl later. The results presented here can be important to understand why structures adopt a helical shape in general, which can be of interest in nanotechnology, biomolecular science, or even to understand why plant filaments curl.
Role of feature curvature in contact guidance
Mathur, Anurag; Moore, Simon W.; Sheetz, Michael P.; Hone, James
2012-01-01
This study examines the role of feature curvature in cellular topography sensing. To separate the effects of feature size and curvature, we have developed a method to fabricate grooved substrates whose radius of curvature (r) is varied from under 10 nm to 400 nm, while all other dimensions are kept constant. With increasing r up to 200 nm, mouse embryonic fibroblasts increased their spread area, but reduced their polarization (aspect ratio). Interestingly, on features with an r of 200 and 400 nm - where there was very little effect on spreading area and polarization - we find that internal structures such as stress fibers are nevertheless still strongly aligned to the topography. These findings are of importance to studies of both tissue engineering and curvature sensing proteins. PMID:22426288
Detonation front curvatures and detonation rates
NASA Astrophysics Data System (ADS)
Lauderbach, Lisa M.; Lorenz, K. Thomas; Lee, Edward L.; Souers, P. Clark
2017-01-01
Many detonation front curvatures are reviewed. Most are of the Shock Dynamics type, which are described as a combination of quadratic and 8th power-of-the-radius curves. The integrated fraction of the 8th power curve is taken as a measure of curvature, which we are able to relate to the logarithm of the detonation rate. This provides a means of estimating the rates of some unknown explosives from the curvature. Using the edge lag divided by the radius is an even better way. A second group of curvatures are almost or purely quadratic. This is probably not associated with density gradients but may be caused by low sound speeds. A final group of "sombreros" show curvy fronts for ideal explosives, which appear to be caused by density gradients.
Spline-Based Smoothing of Airfoil Curvatures
NASA Technical Reports Server (NTRS)
Li, W.; Krist, S.
2008-01-01
Constrained fitting for airfoil curvature smoothing (CFACS) is a splinebased method of interpolating airfoil surface coordinates (and, concomitantly, airfoil thicknesses) between specified discrete design points so as to obtain smoothing of surface-curvature profiles in addition to basic smoothing of surfaces. CFACS was developed in recognition of the fact that the performance of a transonic airfoil is directly related to both the curvature profile and the smoothness of the airfoil surface. Older methods of interpolation of airfoil surfaces involve various compromises between smoothing of surfaces and exact fitting of surfaces to specified discrete design points. While some of the older methods take curvature profiles into account, they nevertheless sometimes yield unfavorable results, including curvature oscillations near end points and substantial deviations from desired leading-edge shapes. In CFACS as in most of the older methods, one seeks a compromise between smoothing and exact fitting. Unlike in the older methods, the airfoil surface is modified as little as possible from its original specified form and, instead, is smoothed in such a way that the curvature profile becomes a smooth fit of the curvature profile of the original airfoil specification. CFACS involves a combination of rigorous mathematical modeling and knowledge-based heuristics. Rigorous mathematical formulation provides assurance of removal of undesirable curvature oscillations with minimum modification of the airfoil geometry. Knowledge-based heuristics bridge the gap between theory and designers best practices. In CFACS, one of the measures of the deviation of an airfoil surface from smoothness is the sum of squares of the jumps in the third derivatives of a cubicspline interpolation of the airfoil data. This measure is incorporated into a formulation for minimizing an overall deviation- from-smoothness measure of the airfoil data within a specified fitting error tolerance. CFACS has been
Curvature Analysis of Cardiac Excitation Wavefronts
2013-04-01
computational cardiac-cell network accurately reproduces a particular kind of cardiac arrhythmia , such as ventricular fibrillation. Curvature Analysis of Cardiac...network accurately reproduces a particular kind of cardiac arrhythmia , such as ventricular fibrillation. Index Terms Cardiac excitation waves...isopotentials, Bézier curves, curvature, cardiac arrhythmia and fibrillation Ç 1 INTRODUCTION AN estimated 81,000,000 American adults, more than onein three
Instant curvature measurement for microcantilever sensors
Jeon, Sangmin; Thundat, Thomas
2004-08-09
A multiple-point deflection technique has been developed for the instant measurement of microcantilever curvature. Eight light-emitting diodes are focused on various positions of a gold-coated silicon cantilever through optical fibers, and temperature change or chemical adsorption induces cantilever bending. The deflection at each point on the cantilever is measured with subnanometer precision by a position-sensitive detector, and thus the curvature of the cantilever is obtained.
Curvature adaptive optics and low light imaging
NASA Astrophysics Data System (ADS)
Ftaclas, C.; Chun, M.; Kuhn, J.; Ritter, J.
We review the basic approach of curvature adaptive optics (AO) and show how its many advantages arise. A curvature wave front sensor (WFS) measures exactly what a curvature deformable mirror (DM) generates. This leads to the computational and operational simplicity of a nearly diagonal control matrix. The DM automatically reconstructs the wave front based on WFS curvature measurements. Thus, there is no formal wave front reconstruction. This poses an interesting challenge to post-processing of AO images. Physical continuity of the DM and the reconstruction of phase from wave front curvature data assure that each actuated region of the DM corrects local phase, tip-tilt and focus. This gain in per-channel correction efficiency, combined with the need for only one pixel per channel detector reads in the WFS allows the use of photon counting detectors for wave front sensing. We note that the use of photon counting detectors implies penalty-free combination of correction channels either in the WFS or on the DM. This effectively decouples bright and faint source performance in that one no longer predicts the other. The application of curvature AO to the low light moving target detection problem, and explore the resulting challenges to components and control systems. Rapidly moving targets impose high-speed operation posing new requirements unique to curvature components. On the plus side, curvature wave front sensors, unlike their Shack-Hartmann counterparts, are tunable for optimum sensitivity to seeing and we are examining autonomous optimization of the WFS to respond to rapid changes in seeing.
The role of curvature in entanglement
NASA Astrophysics Data System (ADS)
Buck, Gregory
2015-10-01
Which tangles more readily: curly hair or straight hair? A perhaps natural thought, supported by some theoretical evidence, is to associate curvature and entanglement, and assume that they would grow together-that an increase in one fosters an increase in the other. However we have biological examples such as DNA in the chromosome, and mechanical examples such as coiled telephone cords, in which much more curvature is employed than is required for the packing, and in which tangling is presumably detrimental. We offer a resolution to this conundrum. We show, that at least for simple but generally applicable models, the relationship between curvature and entanglement is subtle: if we keep filament density constant and increase curvature, the entanglement initially increases, passes through a maximum, then decreases, so there is a regime where increasing curvature increases entanglement, and there is also a regime where increasing curvature decreases entanglement. This has implications for filament packing in many circumstances, and in particular for the compaction structure of DNA in the cell-it provides a straightforward argument for the view that one purpose of DNA coiling and supercoiling is to inhibit entanglement. It also tells us to expect that wavy hair-neither the straightest nor the curliest-tangles most readily.
Spherical gravitational curvature boundary-value problem
NASA Astrophysics Data System (ADS)
Šprlák, Michal; Novák, Pavel
2016-08-01
Values of scalar, vector and second-order tensor parameters of the Earth's gravitational field have been collected by various sensors in geodesy and geophysics. Such observables have been widely exploited in different parametrization methods for the gravitational field modelling. Moreover, theoretical aspects of these quantities have extensively been studied and well understood. On the other hand, new sensors for observing gravitational curvatures, i.e., components of the third-order gravitational tensor, are currently under development. As the gravitational curvatures represent new types of observables, their exploitation for modelling of the Earth's gravitational field is a subject of this study. Firstly, the gravitational curvature tensor is decomposed into six parts which are expanded in terms of third-order tensor spherical harmonics. Secondly, gravitational curvature boundary-value problems defined for four combinations of the gravitational curvatures are formulated and solved in spectral and spatial domains. Thirdly, properties of the corresponding sub-integral kernels are investigated. The presented mathematical formulations reveal some important properties of the gravitational curvatures and extend the so-called Meissl scheme, i.e., an important theoretical framework that relates various parameters of the Earth's gravitational field.
The effect of spontaneous curvature on a two-phase vesicle
Cox, Geoffrey; Lowengrub, John
2015-01-01
Vesicles are membrane-bound structures commonly known for their roles in cellular transport and the shape of a vesicle is determined by its surrounding membrane (lipid bilayer). When the membrane is composed of different lipids, it is natural for the lipids of similar molecular structure to migrate towards one another (via spinodal decomposition), creating a multi-phase vesicle. In this article, we consider a two-phase vesicle model which is driven by nature’s propensity to maintain a minimal state of elastic energy. The model assumes a continuum limit, thereby treating the membrane as a closed three-dimensional surface. The main purpose of this study is to reveal the complexity of the Helfrich two-phase vesicle model with non-zero spontaneous curvature and provide further evidence to support the relevance of spontaneous curvature as a modelling parameter. In this paper, we illustrate the complexity of the Helfrich two-phase model by providing multiple examples of undocumented solutions and energy hysteresis. We also investigate the influence of spontaneous curvature on morphological effects and membrane phenomena such as budding and fusion. PMID:26097287
Formation, Stability, and Mobility of One-Dimensional Lipid Bilayer on High Curvature Substrates
Huang, J; Martinez, J; Artyukhin, A; Sirbuly, D; Wang, Y; Ju, J W; Stroeve, P; Noy, A
2007-03-23
Curved lipid membranes are ubiquitous in living systems and play an important role in many biological processes. To understand how curvature and lipid composition affect membrane formation and fluidity we have assembled and studied mixed 1,2-Dioleoyl-sn-Glycero-3-Phosphocholine (DOPC) and 1,2-Dioleoyl-sn-Glycero-3-Phosphoethanolamine (DOPE) supported lipid bilayers on amorphous silicon nanowires with controlled diameters ranging from 20 nm to 200 nm. Addition of cone-shaped DOPE molecules to cylindrical DOPC molecules promotes vesicle fusion and bilayer formation on smaller diameter nanowires. Our experiments demonstrate that nanowire-supported bilayers are mobile, exhibit fast recovery after photobleaching, and have low concentration of defects. Lipid diffusion coefficients in these high-curvature tubular membranes are comparable to the values reported for flat supported bilayers and increase with decreasing nanowire diameter.
Strong curvature effects in Neumann wave problems
Willatzen, M.; Pors, A.; Gravesen, J.
2012-08-15
Waveguide phenomena play a major role in basic sciences and engineering. The Helmholtz equation is the governing equation for the electric field in electromagnetic wave propagation and the acoustic pressure in the study of pressure dynamics. The Schroedinger equation simplifies to the Helmholtz equation for a quantum-mechanical particle confined by infinite barriers relevant in semiconductor physics. With this in mind and the interest to tailor waveguides towards a desired spectrum and modal pattern structure in classical structures and nanostructures, it becomes increasingly important to understand the influence of curvature effects in waveguides. In this work, we demonstrate analytically strong curvature effects for the eigenvalue spectrum of the Helmholtz equation with Neumann boundary conditions in cases where the waveguide cross section is a circular sector. It is found that the linear-in-curvature contribution originates from parity symmetry breaking of eigenstates in circular-sector tori and hence vanishes in a torus with a complete circular cross section. The same strong curvature effect is not present in waveguides subject to Dirichlet boundary conditions where curvature contributions contribute to second-order in the curvature only. We demonstrate this finding by considering wave propagation in a circular-sector torus corresponding to Neumann and Dirichlet boundary conditions, respectively. Results for relative eigenfrequency shifts and modes are determined and compared with three-dimensional finite element method results. Good agreement is found between the present analytical method using a combination of differential geometry with perturbation theory and finite element results for a large range of curvature ratios.
Multiscale Lagrangian Statistics of Curvature Angle in Pore-Scale Turbulence
NASA Astrophysics Data System (ADS)
He, Bryan; Kadoch, Benjamin; Apte, Sourabh; Farge, Marie; Schneider, Kai
2016-11-01
Porescale turbulent flow physics are investigated using Direct Numeric Simulation (DNS) of flow through a periodic face centered cubic (FCC) unit cell at Reynolds numbers of 300, 500 and 1000. The simulations are performed using a fictitious domain approach, which uses non-body conforming Cartesian grids. Lagrangian statistics of scale dependent curvature angle and acceleration are calculated by tracking a large number of fluid particle trajectories. For isotropic turbulence, it has been shown that the mean curvature angle varies linearly with time initially, reaches an inertial range and asymptotes to a value of π / 2 at long times, corresponding to the decorrelation and equipartition of the cosine of the curvature angle. Similar trends are observed at early times for turbulence in porous medium; however, the mean curvature angle asymptotes to a value larger than π / 2 , due to the effect of confinement on the fluid particle trajectories that result in preferred directions at large times. A Monte-Carlo based stochastic model to predict the long-time behavior of curvature angles is developed and shown to correctly predicts an angle larger than π / 2 at large times. NSF Project Numbers 1336983, 1133363.
Self-assembly of a filament by curvature-inducing proteins
NASA Astrophysics Data System (ADS)
Kwiecinski, James; Chapman, S. Jonathan; Goriely, Alain
2017-04-01
We explore a simplified macroscopic model of membrane shaping by means of curvature-sensing BAR proteins. Equations describing the interplay between the shape of a freely floating filament in a fluid and the adhesion kinetics of proteins are derived from mechanical principles. The constant curvature solutions that arise from this system are studied using weakly nonlinear analysis. We show that the stability of the filament's shape is completely characterized by the parameters associated with protein recruitment and establish that in the bistable regime, proteins aggregate on the filament forming regions of high and low curvatures. This pattern formation is then followed by phase-coarsening that resolves on a time-scale dependent on protein diffusion and drift across the filament, which contend to smooth and maintain the pattern respectively. The model is generalized for multiple species of BAR proteins and we show that the stability of the assembled shape is determined by a competition between proteins attaching on opposing sides.
Membrane with supported internal passages
NASA Technical Reports Server (NTRS)
Gonzalez-Martin, Anuncia (Inventor); Salinas, Carlos E. (Inventor); Cisar, Alan J. (Inventor); Hitchens, G. Duncan (Inventor); Murphy, Oliver J. (Inventor)
2000-01-01
The invention provides an improved proton exchange membrane for use in electrochemical cells having internal passages parallel to the membrane surface comprising permanent tubes preferably placed at the ends of the fluid passages. The invention also provides an apparatus and process for making the membrane, membrane and electrode assemblies fabricated using the membrane, and the application of the membrane and electrode assemblies to a variety of devices, both electrochemical and otherwise. The passages in the membrane extend from one edge of the membrane to another and allow fluid flow through the membrane and give access directly to the membrane.
Eigenstates of Moebius nanostructures including curvature effects
Gravesen, J.; Willatzen, M.
2005-09-15
Moebius-shell structures and their physical properties have recently received considerable attention experimentally and theoretically. In this work, eigenstates and associated eigenenergies are determined for a quantum-mechanical particle bounded to a Moebius shell including curvature contributions to the kinetic-energy operator. This is done using a parametrization of the Moebius shell-found by minimizing the elastic energy of the full structure-and employing differential-geometry methods. It is shown that inclusion of curvature contributions to the kinetic energy leads to splitting of the otherwise doubly degenerate groundstate and significantly alters the form of the groundstate and excited-state wavefunctions. Hence, we anticipate qualitative changes in the physical properties of Moebius-shell structures due to surface confinement and curvature effects.
Cosmic curvature from de Sitter equilibrium cosmology.
Albrecht, Andreas
2011-10-07
I show that the de Sitter equilibrium cosmology generically predicts observable levels of curvature in the Universe today. The predicted value of the curvature, Ω(k), depends only on the ratio of the density of nonrelativistic matter to cosmological constant density ρ(m)(0)/ρ(Λ) and the value of the curvature from the initial bubble that starts the inflation, Ω(k)(B). The result is independent of the scale of inflation, the shape of the potential during inflation, and many other details of the cosmology. Future cosmological measurements of ρ(m)(0)/ρ(Λ) and Ω(k) will open up a window on the very beginning of our Universe and offer an opportunity to support or falsify the de Sitter equilibrium cosmology.
HEREDITARY DISTAL FORELEG CURVATURE IN THE RABBIT
Pearce, Louise
1960-01-01
An inwardly directed curvature of the distal segment of both forelegs of the rabbit has been described. The condition was detected at 2 to 3 weeks of age, developed rapidly, and reached its final and permanent stage at 2 to 3 months of age. Only the distal epiphysis of the ulna was primarily affected and this in the form of a massive chondrodystrophic lesion accompanied by a progressive curvature of the shaft. The curvature of the growing radius was a secondary effect due to the firm, immovable, anatomical connection of the ulna and radius. The positional changes of the wrist and paw were likewise effects secondary to the changed form of the ulna and radius. The bowing abnormality occurred only in certain families of pure bred Beveren, Belgian, French Silver, and Dutch rabbits and was found to be inherited. The mode of inheritance was on the basis of a single recessive unit factor (5). PMID:13733755
NASTRAN modifications for recovering strains and curvatures
NASA Technical Reports Server (NTRS)
Hennrich, C. W.
1975-01-01
Modifications to the NASTRAN structural analysis computer program are described. The modifications allow the recovery of strain and curvature data for the general two-dimensional elements, in addition to the usual stress data. Option features allow the transformation of the strain/curvature (or stress) data to a common coordinate system and representation at the grid points of the structural model rather than at the conventional element center locations. Usage information is provided which will allow present users of NASTRAN to easily utilize the new capability.
Equal-Curvature X-Ray Telescopes
NASA Technical Reports Server (NTRS)
Saha, Timo T.; Zhang, William
2002-01-01
We introduce a new type of x-ray telescope design; an Equal-Curvature telescope. We simply add a second order axial sag to the base grazing incidence cone-cone telescope. The radius of curvature of the sag terms is the same on the primary surface and on the secondary surface. The design is optimized so that the on-axis image spot at the focal plane is minimized. The on-axis RMS (root mean square) spot diameter of two studied telescopes is less than 0.2 arc-seconds. The off-axis performance is comparable to equivalent Wolter type 1 telescopes.
Ray Curvature and Refraction of Wave Packets.
1978-09-01
1!~~~~~ _ ‘ AD AOM 302 FLORIDA STATE UNIV TALLAHASSEE DEPT OF OCEANOGRAPHY FIG B/3 RAY CURVATURE AND REFRACTION OF WAVE PACKETS. (U) SEP 78 .J E...BREEDING N00014—77—C—0329 UNCLASSIFIED TR JE6 3 NL _ _ _ rwii__ _ ~iU ir!I I -~~ RAYOJR\\1L~[UREAND REFRACI ION OF WAVE F1~\\CKET~S ~y J. Ernest Breeding...01 29 014 -~ Technical Report No. JEB-3 Department of Oceanography • Florida State University RAY CURVATURE AND REFRACTION OF WAVE PACKETS b O G • J
Membrane shape instabilities induced by BAR domain proteins
NASA Astrophysics Data System (ADS)
Baumgart, Tobias
2014-03-01
Membrane curvature has developed into a forefront of membrane biophysics. Numerous proteins involved in membrane curvature sensing and membrane curvature generation have recently been discovered, including proteins containing the crescent-shaped BAR domain as membrane binding and shaping module. Accordingly, the structure determination of these proteins and their multimeric complexes is increasingly well-understood. Substantially less understood, however, are thermodynamic and kinetic aspects and the detailed mechanisms of how these proteins interact with membranes in a curvature-dependent manner. New experimental approaches need to be combined with established techniques to be able to fill in these missing details. Here we use model membrane systems in combination with a variety of biophysical techniques to characterize mechanistic aspects of BAR domain protein function. This includes a characterization of membrane curvature sensing and membrane generation. We also establish kinetic and thermodynamic aspects of BAR protein dimerization in solution, and investigate kinetic aspects of membrane binding. We present two new approaches to investigate membrane shape instabilities and demonstrate that membrane shape instabilities can be controlled by protein binding and lateral membrane tension. This work is supported through NIH grant GM-097552 and NSF grant CBET-1053857.
Graph Curvature for Differentiating Cancer Networks
Sandhu, Romeil; Georgiou, Tryphon; Reznik, Ed; Zhu, Liangjia; Kolesov, Ivan; Senbabaoglu, Yasin; Tannenbaum, Allen
2015-01-01
Cellular interactions can be modeled as complex dynamical systems represented by weighted graphs. The functionality of such networks, including measures of robustness, reliability, performance, and efficiency, are intrinsically tied to the topology and geometry of the underlying graph. Utilizing recently proposed geometric notions of curvature on weighted graphs, we investigate the features of gene co-expression networks derived from large-scale genomic studies of cancer. We find that the curvature of these networks reliably distinguishes between cancer and normal samples, with cancer networks exhibiting higher curvature than their normal counterparts. We establish a quantitative relationship between our findings and prior investigations of network entropy. Furthermore, we demonstrate how our approach yields additional, non-trivial pair-wise (i.e. gene-gene) interactions which may be disrupted in cancer samples. The mathematical formulation of our approach yields an exact solution to calculating pair-wise changes in curvature which was computationally infeasible using prior methods. As such, our findings lay the foundation for an analytical approach to studying complex biological networks. PMID:26169480
Riemann curvature of a boosted spacetime geometry
NASA Astrophysics Data System (ADS)
Battista, Emmanuele; Esposito, Giampiero; Scudellaro, Paolo; Tramontano, Francesco
2016-10-01
The ultrarelativistic boosting procedure had been applied in the literature to map the metric of Schwarzschild-de Sitter spacetime into a metric describing de Sitter spacetime plus a shock-wave singularity located on a null hypersurface. This paper evaluates the Riemann curvature tensor of the boosted Schwarzschild-de Sitter metric by means of numerical calculations, which make it possible to reach the ultrarelativistic regime gradually by letting the boost velocity approach the speed of light. Thus, for the first time in the literature, the singular limit of curvature, through Dirac’s δ distribution and its derivatives, is numerically evaluated for this class of spacetimes. Moreover, the analysis of the Kretschmann invariant and the geodesic equation shows that the spacetime possesses a “scalar curvature singularity” within a 3-sphere and it is possible to define what we here call “boosted horizon”, a sort of elastic wall where all particles are surprisingly pushed away, as numerical analysis demonstrates. This seems to suggest that such “boosted geometries” are ruled by a sort of “antigravity effect” since all geodesics seem to refuse to enter the “boosted horizon” and are “reflected” by it, even though their initial conditions are aimed at driving the particles toward the “boosted horizon” itself. Eventually, the equivalence with the coordinate shift method is invoked in order to demonstrate that all δ2 terms appearing in the Riemann curvature tensor give vanishing contribution in distributional sense.
Seismological Constraints on Fault Plane Curvature
NASA Astrophysics Data System (ADS)
Reynolds, K.
2015-12-01
The down-dip geometry of seismically active normal faults is not well known. Many examples of normal faults with down-dip curvature exist, such as listric faults revealed in cross-section or in seismic reflection data, or the exposed domes of core complexes. However, it is not understood: (1) whether curved faults fail in earthquakes, and (2) if those faults have generated earthquakes, is the curvature a primary feature of the rupture or due to later modification of the plane? Even if an event is surface-rupturing, because of the limited depth-extent over which observations can be made, it is difficult to reliably constrain the change in dip with depth (if any) and therefore the fault curvature. Despite the uncertainty in seismogenic normal fault geometries, published slip inversions most commonly use planar fault models. We investigate the seismological constraints on normal fault geometry using a forward-modelling approach and present a seismological technique for determining down-dip geometry. We demonstrate that complexity in the shape of teleseismic body waveforms may be used to investigate the presence of down-dip fault plane curvature. We have applied this method to a catalogue of continental and oceanic normal faulting events. Synthetic models demonstrate that the shapes of SH waveforms at along-strike stations are particularly sensitive to fault plane geometry. It is therefore important to consider the azimuthal station coverage before modelling an event. We find that none of the data require significant down-dip curvature, although the modelling results for some events remain ambiguous. In some cases we can constrain that the down-dip fault geometry is within 20° of planar.
How to calculate normal curvatures of sampled geological surfaces
NASA Astrophysics Data System (ADS)
Bergbauer, Stephan; Pollard, David D.
2003-02-01
Curvature has been used both to describe geological surfaces and to predict the distribution of deformation in folded or domed strata. Several methods have been proposed in the geoscience literature to approximate the curvature of surfaces; however we advocate a technique for the exact calculation of normal curvature for single-valued gridded surfaces. This technique, based on the First and Second Fundamental Forms of differential geometry, allows for the analytical calculation of the magnitudes and directions of principal curvatures, as well as Gaussian and mean curvature. This approach is an improvement over previous methods to calculate surface curvatures because it avoids common mathematical approximations, which introduce significant errors when calculated over sloped horizons. Moreover, the technique is easily implemented numerically as it calculates curvatures directly from gridded surface data (e.g. seismic or GPS data) without prior surface triangulation. In geological curvature analyses, problems arise because of the sampled nature of geological horizons, which introduces a dependence of calculated curvatures on the sample grid. This dependence makes curvature analysis without prior data manipulation problematic. To ensure a meaningful curvature analysis, surface data should be filtered to extract only those surface wavelengths that scale with the feature under investigation. A curvature analysis of the top-Pennsylvanian horizon at Goose Egg dome, Wyoming shows that sampled surfaces can be smoothed using a moving average low-pass filter to extract curvature information associated with the true morphology of the structure.
Membrane remodeling by the M2 amphipathic helix drives influenza virus membrane scission
Martyna, Agnieszka; Bahsoun, Basma; Badham, Matthew D.; Srinivasan, Saipraveen; Howard, Mark J.; Rossman, Jeremy S.
2017-01-01
Membrane scission is a crucial step in all budding processes, from endocytosis to viral budding. Many proteins have been associated with scission, though the underlying molecular details of how scission is accomplished often remain unknown. Here, we investigate the process of M2-mediated membrane scission during the budding of influenza viruses. Residues 50–61 of the viral M2 protein bind membrane and form an amphipathic α-helix (AH). Membrane binding requires hydrophobic interactions with the lipid tails but not charged interactions with the lipid headgroups. Upon binding, the M2AH induces membrane curvature and lipid ordering, constricting and destabilizing the membrane neck, causing scission. We further show that AHs in the cellular proteins Arf1 and Epsin1 behave in a similar manner. Together, they represent a class of membrane-induced AH domains that alter membrane curvature and fluidity, mediating the scission of constricted membrane necks in multiple biological pathways. PMID:28317901
NASA Astrophysics Data System (ADS)
Breidenich, Markus
2000-11-01
The surface of biological cells consists of a lipid membrane and a large amount of various proteins and polymers, which are embedded in the membrane or attached to it. We investigate how membranes are influenced by polymers, which are anchored to the membrane by one end. The entropic pressure exerted by the polymer induces a curvature, which bends the membrane away from the polymer. The resulting membrane shape profile is a cone in the vicinity of the anchor segment and a catenoid far away from it. The perturbative calculations are confirmed by Monte-Carlo simulations. An additional attractive interaction between polymer and membrane reduces the entropically induced curvature. In the limit of strong adsorption, the polymer is localized directly on the membrane surface and does not induce any pressure, i.e. the membrane curvature vanishes. If the polymer is not anchored directly on the membrane surface, but in a non-vanishing anchoring distance, the membrane bends towards the polymer for strong adsorption. In the last part of the thesis, we study membranes under the influence of non-anchored polymers in solution. In the limit of pure steric interactions between the membrane and free polymers, the membrane curves towards the polymers (in contrast to the case of anchored polymers). In the limit of strong adsorption the membrane bends away from the polymers. Die Oberfläche biologischer Zellen besteht aus einer Lipidmembran und einer Vielzahl von Proteinen und Polymeren, die in die Membran eingebaut sind. Die Beeinflussung der Membran durch Polymere, die mit einem Ende an der Membran verankert sind, wird im Rahmen dieser Arbeit anhand eines vereinfachten biomimetischen Systems studiert. Der entropische Druck, den das Polymer durch Stöße auf die Membran ausübt, führt dazu, dass sich die Membran vom Polymer weg krümmt. Die resultierende Membranform ist ein Kegel in der Nähe des Ankers und ein Katenoid in grossem Abstand vom Ankerpunkt. Monte Carlo-Simulationen best
Inequalities for scalar curvature of pseudo-Riemannian submanifolds
NASA Astrophysics Data System (ADS)
Tripathi, Mukut Mani; Gülbahar, Mehmet; Kılıç, Erol; Keleş, Sadık
2017-02-01
Some basic inequalities, involving the scalar curvature and the mean curvature, for a pseudo-Riemannian submanifold of a pseudo-Riemannian manifold are obtained. We also find inequalities for spacelike submanifolds. Equality cases are also discussed.
Domain Formation in Membranes Near the Onset of Instability
NASA Astrophysics Data System (ADS)
Fonseca, Irene; Hayrapetyan, Gurgen; Leoni, Giovanni; Zwicknagl, Barbara
2016-10-01
The formation of microdomains, also called rafts, in biomembranes can be attributed to the surface tension of the membrane. In order to model this phenomenon, a model involving a coupling between the local composition and the local curvature was proposed by Seul and Andelman in 1995. In addition to the familiar Cahn-Hilliard/Modica-Mortola energy, there are additional `forces' that prevent large domains of homogeneous concentration. This is taken into account by the bending energy of the membrane, which is coupled to the value of the order parameter, and reflects the notion that surface tension associated with a slightly curved membrane influences the localization of phases as the geometry of the lipids has an effect on the preferred placement on the membrane. The main result of the paper is the study of the Γ -convergence of this family of energy functionals, involving nonlocal as well as negative terms. Since the minimizers of the limiting energy have minimal interfaces, the physical interpretation is that, within a sufficiently strong interspecies surface tension and a large enough sample size, raft microdomains are not formed.
Measuring Intrinsic Curvature of Space with Electromagnetism
NASA Astrophysics Data System (ADS)
Mabin, Mason; Becker, Maria; Batelaan, Herman
2016-10-01
The concept of curved space is not readily observable in everyday life. The educational movie "Sphereland" attempts to illuminate the idea. The main character, a hexagon, has to go to great lengths to prove that her world is in fact curved. We present an experiment that demonstrates a new way to determine if a two-dimensional surface, the 2-sphere, is curved. The behavior of an electric field, placed on a spherical surface, is shown to be related to the intrinsic Gaussian curvature. This approach allows students to gain some understanding of Einstein's theory of general relativity, which relates the curvature of spacetime to the presence of mass and energy. Additionally, an opportunity is provided to investigate the dimensionality of Gauss's law.
Tube curvature measuring probe and method
Sokol, George J.
1990-01-01
The present invention is directed to a probe and method for measuring the radius of curvature of a bend in a section of tubing. The probe includes a member with a pair of guide means, one located at each end of the member. A strain gauge is operatively connected to the member for detecting bending stress exrted on the member as the probe is drawn through and in engagement with the inner surface of a section of tubing having a bend. The method of the present invention includes steps utilizing a probe, like the aforementioned probe, which can be made to detect bends only in a single plane when having a fixed orientation relative the section of tubing to determine the maximum radius of curvature of the bend.
Streamline curvature in supersonic shear layers
NASA Technical Reports Server (NTRS)
Kibens, V.
1992-01-01
Results of an experimental investigation in which a curved shear layer was generated between supersonic flow from a rectangular converging/diverging nozzle and the freestream in a series of open channels with varying radii of curvature are reported. The shear layers exhibit unsteady large-scale activity at supersonic pressure ratios, indicating increased mixing efficiency. This effect contrasts with supersonic flow in a straight channel, for which no large-scale vortical structure development occurs. Curvature must exceed a minimum level before it begins to affect the dynamics of the supersonic shear layer appreciably. The curved channel flows are compared with reference flows consisting of a free jet, a straight channel, and wall jets without sidewalls on a flat and a curved plate.
Static optical designs for Wavefront Curvature Sensing
NASA Astrophysics Data System (ADS)
Bharmal, Nazim A.
2006-06-01
A bulk optic is presented, the Parallel Output Beamsplitter, which allows simultaneous imaging of two planes either side of the focus using static imaging optics. The POB is used to create novel optical configurations for Wavefront Curvature Sensing and two designs are presented. The first is suited to small-amplitude aberration measurements in situations where compactness, a large field of view, and high optical throughput are desirable. A laboratory experiment using a POB to make such a wavefront sensor was undertaken, and results are presented. The second design is a conceptual idea which offers image-scale invariant imaging of two planes whose conjugation satisfies the requirements of a conventional Wavefront Curvature Sensor concept.
Cosmological signatures of anisotropic spatial curvature
Pereira, Thiago S.; Marugán, Guillermo A. Mena; Carneiro, Saulo E-mail: mena@iem.cfmac.csic.es
2015-07-01
If one is willing to give up the cherished hypothesis of spatial isotropy, many interesting cosmological models can be developed beyond the simple anisotropically expanding scenarios. One interesting possibility is presented by shear-free models in which the anisotropy emerges at the level of the curvature of the homogeneous spatial sections, whereas the expansion is dictated by a single scale factor. We show that such models represent viable alternatives to describe the large-scale structure of the inflationary universe, leading to a kinematically equivalent Sachs-Wolfe effect. Through the definition of a complete set of spatial eigenfunctions we compute the two-point correlation function of scalar perturbations in these models. In addition, we show how such scenarios would modify the spectrum of the CMB assuming that the observations take place in a small patch of a universe with anisotropic curvature.
Constraining inverse-curvature gravity with supernovae.
Mena, Olga; Santiago, José; Weller, Jochen
2006-02-03
We show that models of generalized modified gravity, with inverse powers of the curvature, can explain the current accelerated expansion of the Universe without resorting to dark energy and without conflicting with solar system experiments. We have solved the Friedmann equations for the full dynamical range of the evolution of the Universe and performed a detailed analysis of supernovae data in the context of such models that results in an excellent fit. If we further include constraints on the current expansion of the Universe and on its age, we obtain that the matter content of the Universe is 0.07
Breeding curvature from extended gauge covariance
NASA Astrophysics Data System (ADS)
Aldrovandi, R.
1991-05-01
Independence between spacetime and “internal” space in gauge theories is related to the adjoint-covariant behaviour of the gauge potential. The usual gauge scheme is modified to allow a coupling between both spaces. Gauging spacetime translations produce field equations similar to Einstein equations. A curvature-like quantity of mixed differential-algebraic character emerges. Enlarged conservation laws are present, pointing to the presence of an covariance.
Curvature of spacetime: A simple student activity
NASA Astrophysics Data System (ADS)
Wood, Monika; Smith, Warren; Jackson, Matthew
2016-12-01
The following is a description of an inexpensive and simple student experiment for measuring the differences between the three types of spacetime topology—Euclidean (flat), Riemann (spherical), and Lobachevskian (saddle) curvatures. It makes use of commonly available tools and materials, and requires only a small amount of construction. The experiment applies to astronomical topics such as gravity, spacetime, general relativity, as well as geometry and mathematics.
Superintegrable systems on spaces of constant curvature
Gonera, Cezary Kaszubska, Magdalena
2014-07-15
Construction and classification of two-dimensional (2D) superintegrable systems (i.e. systems admitting, in addition to two global integrals of motion guaranteeing the Liouville integrability, the third global and independent one) defined on 2D spaces of constant curvature and separable in the so-called geodesic polar coordinates are presented. The method proposed is applicable to any value of curvature including the case of Euclidean plane, sphere and hyperbolic plane. The main result is a generalization of Bertrand’s theorem on 2D spaces of constant curvature and covers most of the known separable and superintegrable models on such spaces (in particular, the so-called Tremblay–Turbiner–Winternitz (TTW) and Post–Winternitz (PW) models which have recently attracted some interest). -- Highlights: •Classifying 2D superintegrable, separable (polar coordinates) systems on S{sup 2}, R{sup 2}, H{sup 2}. •Construction of radial, angular potentials leading to superintegrability. •Generalization of Bertrand’s theorem covering known models, e.g. Higgs, TTW, PW, and Coulomb.
Multiple Manifold Clustering Using Curvature Constrained Path
Babaeian, Amir; Bayestehtashk, Alireza; Bandarabadi, Mojtaba
2015-01-01
The problem of multiple surface clustering is a challenging task, particularly when the surfaces intersect. Available methods such as Isomap fail to capture the true shape of the surface near by the intersection and result in incorrect clustering. The Isomap algorithm uses shortest path between points. The main draw back of the shortest path algorithm is due to the lack of curvature constrained where causes to have a path between points on different surfaces. In this paper we tackle this problem by imposing a curvature constraint to the shortest path algorithm used in Isomap. The algorithm chooses several landmark nodes at random and then checks whether there is a curvature constrained path between each landmark node and every other node in the neighborhood graph. We build a binary feature vector for each point where each entry represents the connectivity of that point to a particular landmark. Then the binary feature vectors could be used as a input of conventional clustering algorithm such as hierarchical clustering. We apply our method to simulated and some real datasets and show, it performs comparably to the best methods such as K-manifold and spectral multi-manifold clustering. PMID:26375819
Free-streaming radiation in cosmological models with spatial curvature
NASA Technical Reports Server (NTRS)
Wilson, M. L.
1982-01-01
The effects of spatial curvature on radiation anisotropy are examined for the standard Friedmann-Robertson-Walker model universes. The effect of curvature is found to be very important when considering fluctuations with wavelengths comparable to the horizon. It is concluded that the behavior of radiation fluctuations in models with spatial curvature is quite different from that in spatially flat models, and that models with negative curvature are most strikingly different. It is therefore necessary to take the curvature into account in careful studies of the anisotropy of the microwave background.
The crack problem in a specially orthotropic shell with double curvature
NASA Technical Reports Server (NTRS)
Delale, F.; Erdogan, F.
1982-01-01
The crack problem of a shallow shell with two nonzero curvatures is considered. It is assumed that the crack lies in one of the principal planes of curvature and the shell is under Mode I loading condition. The material is assumed to be specially orthotropic. After giving the general formulation of the problem the asymptotic behavior of the stress state around the crack tip is examined. The analysis is based on Reissner's transverse shear theory. Thus, as in the bending of cracked plates, the asymptotic results are shown to be consistent with that obtained from the plane elasticity solution of crack problems. Rather extensive numerical results are obtained which show the effect of material orthotropy on the stress intensity factors in cylindrical and spherical shells and in shells with double curvature. Other results include the stress intensity factors in isotropic toroidal shells with positive or negative curvature ratio, the distribution of the membrane stress resultant outside the crack, and the influence of the material orthotropy on the angular distribution of the stresses around the crack tip.
The crack problem in a specially orthotropic shell with double curvature
NASA Technical Reports Server (NTRS)
Delale, F.; Erdogan, F.
1983-01-01
The crack problem of a shallow shell with two nonzero curvatures is considered. It is assumed that the crack lies in one of the principal planes of curvature and the shell is under Mode I loading condition. The material is assumed to be specially orthotropic. After giving the general formulation of the problem the asymptotic behavior of the stress state around the crack tip is examined. The analysis is based on Reissner's transverse shear theory. Thus, as in the bending of cracked plates, the asymptotic results are shown to be consistent with that obtained from the plane elasticity solution of crack problems. Rather extensive numerical results are obtained which show the effect of material orthotropy on the stress intensity factors in cylindrical and spherical shells and in shells with double curvature. Other results include the stress intensity factors in isotropic toroidal shells with positive or negative curvature ratio, the distribution of the membrane stress resultant outside the crack, and the influence of the material orthotropy on the angular distribution of the stresses around the crack tip. Previously announced in STAR as N83-16782
The role of substrate curvature in actin-based pushing forces.
Schwartz, Ian M; Ehrenberg, Morton; Bindschadler, Michael; McGrath, James L
2004-06-22
The extension of the plasma membrane during cell crawling or spreading is known to require actin polymerization; however, the question of how pushing forces derive from actin polymerization remains open. A leading theory (herein referred to as elastic propulsion) illustrates how elastic stresses in networks growing on curved surfaces can result in forces that push particles. To date all examples of reconstituted motility have used curved surfaces, raising the possibility that such squeezing forces are essential for actin-based pushing. By contrast, other theories, such as molecular ratchets, neither require nor consider surface curvature to explain pushing forces. Here, we critically test the requirement of substrate curvature by reconstituting actin-based motility on polystyrene disks. We find that disks move through extracts in a manner that indicates pushing forces on their flat surfaces and that disks typically move faster than the spheres they are manufactured from. For a subset of actin tails that form on the perimeter of disks, we find no correlation between local surface curvature and tail position. Collectively the data indicate that curvature-dependent mechanisms are not required for actin-based pushing.
Optimal Spatial Scale for Curvature Calculations in Multiphase Flows
NASA Astrophysics Data System (ADS)
Senecal, Jacob; Owkes, Mark
2016-11-01
In gas-liquid flows, the surface tension force often controls the dynamics of the flow and an accurate calculation of this force is necessary for predictive simulations. The surface tension force is directly proportional to the curvature of the gas-liquid interface, making accurate curvature calculations an essential consideration. Multiple methods have been developed to calculate the curvature of volume of fluid (VoF) interface capturing schemes, such as the height function method. These methods have been extensively tested. However, the impact of the scale or size of computational stencil on which the curvature is computed, has not been correlated with the rate at which interface perturbations relax under the surface tension force. In this work, the effect of varying the scale on which the curvature is computed has been tested and quantified. An optimal curvature scale is identified that leads to accurate and converging curvatures, and accurate timescales for surface tension induced, interface dynamics.
Fiber Fabry-Perot interferometer for curvature sensing
NASA Astrophysics Data System (ADS)
Monteiro, Catarina S.; Ferreira, Marta S.; Silva, Susana O.; Kobelke, Jens; Schuster, Kay; Bierlich, Jörg; Frazão, Orlando
2016-12-01
A curvature sensor based on an Fabry-Perot (FP) interferometer was proposed. A capillary silica tube was fusion spliced between two single mode fibers, producing an FP cavity. Two FP sensors with different cavity lengths were developed and subjected to curvature and temperature. The FP sensor with longer cavity showed three distinct operating regions for the curvature measurement. Namely, a linear response was shown for an intermediate curvature radius range, presenting a maximum sensitivity of 68.52 pm/m-1. When subjected to temperature, the sensing head produced a similar response for different curvature radii, with a sensitivity varying from 0.84 pm/°C to 0.89 pm/°C, which resulted in a small cross-sensitivity to temperature when the FP sensor was subjected to curvature. The FP cavity with shorter length presented low sensitivity to curvature.
Curvature inducing macroion condensation driven shape changes of fluid vesicles.
Sreeja, K K; Ipsen, John H; Sunil Kumar, P B
2015-11-21
We study the effect of curvature inducing macroion condensation on the shapes of charged deformable fluid interfaces using dynamically triangulated Monte Carlo simulations. In the weak electrostatic coupling regime, surface charges are weakly screened and the conformations of a vesicle, with fixed spherical topology, depend on the charge-charge interaction on the surface. While in the strong coupling regime, condensation driven curvature induction plays a dominant role in determining the conformations of these surfaces. Condensation itself is observed to be dependent on the induced curvature, with larger induced curvatures favoring increased condensation. We show that both curvature generation and curvature sensing, induced by the interplay of electrostatics and curvature energy, contribute to determination of the vesicle configurations.
Lipid Geometry and Bilayer Curvature Modulate LC3/GABARAP-Mediated Model Autophagosomal Elongation
Landajuela, Ane; Hervás, Javier H.; Antón, Zuriñe; Montes, L. Ruth; Gil, David; Valle, Mikel; Rodriguez, J. Francisco; Goñi, Felix M.; Alonso, Alicia
2016-01-01
Autophagy, an important catabolic pathway involved in a broad spectrum of human diseases, implies the formation of double-membrane-bound structures called autophagosomes (AP), which engulf material to be degraded in lytic compartments. How APs form, especially how the membrane expands and eventually closes upon itself, is an area of intense research. Ubiquitin-like ATG8 has been related to both membrane expansion and membrane fusion, but the underlying molecular mechanisms are poorly understood. Here, we used two minimal reconstituted systems (enzymatic and chemical conjugation) to compare the ability of human ATG8 homologs (LC3, GABARAP, and GATE-16) to mediate membrane fusion. We found that both enzymatically and chemically lipidated forms of GATE-16 and GABARAP proteins promote extensive membrane tethering and fusion, whereas lipidated LC3 does so to a much lesser extent. Moreover, we characterize the GATE-16/GABARAP-mediated membrane fusion as a phenomenon of full membrane fusion, independently demonstrating vesicle aggregation, intervesicular lipid mixing, and intervesicular mixing of aqueous content, in the absence of vesicular content leakage. Multiple fusion events give rise to large vesicles, as seen by cryo-electron microscopy observations. We also show that both vesicle diameter and selected curvature-inducing lipids (cardiolipin, diacylglycerol, and lyso-phosphatidylcholine) can modulate the fusion process, smaller vesicle diameters and negative intrinsic curvature lipids (cardiolipin, diacylglycerol) facilitating fusion. These results strongly support the hypothesis of a highly bent structural fusion intermediate (stalk) during AP biogenesis and add to the growing body of evidence that identifies lipids as important regulators of autophagy. PMID:26789764
Beshears, John; Choi, James J.; Laibson, David; Madrian, Brigitte C.
2009-01-01
Revealed preferences are tastes that rationalize an economic agent’s observed actions. Normative preferences represent the agent’s actual interests. It sometimes makes sense to assume that revealed preferences are identical to normative preferences. But there are many cases where this assumption is violated. We identify five factors that increase the likelihood of a disparity between revealed preferences and normative preferences: passive choice, complexity, limited personal experience, third-party marketing, and intertemporal choice. We then discuss six approaches that jointly contribute to the identification of normative preferences: structural estimation, active decisions, asymptotic choice, aggregated revealed preferences, reported preferences, and informed preferences. Each of these approaches uses consumer behavior to infer some property of normative preferences without equating revealed and normative preferences. We illustrate these issues with evidence from savings and investment outcomes. PMID:24761048
Membrane tension and peripheral protein density mediate membrane shape transitions
NASA Astrophysics Data System (ADS)
Shi, Zheng; Baumgart, Tobias
2015-01-01
Endocytosis is a ubiquitous eukaryotic membrane budding, vesiculation and internalization process fulfilling numerous roles including compensation of membrane area increase after bursts of exocytosis. The mechanism of the coupling between these two processes to enable homeostasis is not well understood. Recently, an ultrafast endocytosis (UFE) pathway was revealed with a speed significantly exceeding classical clathrin-mediated endocytosis (CME). Membrane tension reduction is a potential mechanism by which endocytosis can be rapidly activated at remote sites. Here, we provide experimental evidence for a mechanism whereby membrane tension reduction initiates membrane budding and tubulation mediated by endocytic proteins, such as endophilin A1. We find that shape instabilities occur at well-defined membrane tensions and surface densities of endophilin. From our data, we obtain a membrane shape stability diagram that shows remarkable consistency with a quantitative model. This model applies to all laterally diffusive curvature-coupling proteins and therefore a wide range of endocytic proteins.
Sehgal, Rakesh; Brinker, Charles Jeffrey
1998-01-01
Supported inorganic membranes capable of molecular sieving, and methods for their production, are provided. The subject membranes exhibit high flux and high selectivity. The subject membranes are substantially defect free and less than about 100 nm thick. The pores of the subject membranes have an average critical pore radius of less than about 5 .ANG., and have a narrow pore size distribution. The subject membranes are prepared by coating a porous substrate with a polymeric sol, preferably under conditions of low relative pressure of the liquid constituents of the sol. The coated substrate is dried and calcined to produce the subject supported membrane. Also provided are methods of derivatizing the surface of supported inorganic membranes with metal alkoxides. The subject membranes find use in a variety of applications, such as the separation of constituents of gaseous streams, as catalysts and catalyst supports, and the like.
Steering electromagnetic beams with conical curvature singularities.
Zhang, Yong-Liang; Dong, Xian-Zi; Zheng, Mei-Ling; Zhao, Zhen-Sheng; Duan, Xuan-Ming
2015-10-15
We describe how the transformation-optics technique can be used to design an effective medium mimicking the conical curvature singularity. Anholonomic coordinate transformation gives rise to linear topological defects that break the rotational symmetry. The bending and splitting of the optical beams are found analytically and numerically, depending on the incident direction and the topological charge. Beyond their practical applications to omnidirectional beam steering for photonics, our findings set forth an attractive realm to simulate the relevant physical phenomena in the optical laboratory.
Spacetime Curvature and Higgs Stability after Inflation.
Herranen, M; Markkanen, T; Nurmi, S; Rajantie, A
2015-12-11
We investigate the dynamics of the Higgs field at the end of inflation in the minimal scenario consisting of an inflaton field coupled to the standard model only through the nonminimal gravitational coupling ξ of the Higgs field. Such a coupling is required by renormalization of the standard model in curved space, and in the current scenario also by vacuum stability during high-scale inflation. We find that for ξ≳1, rapidly changing spacetime curvature at the end of inflation leads to significant production of Higgs particles, potentially triggering a transition to a negative-energy Planck scale vacuum state and causing an immediate collapse of the Universe.
Solitons in curved space of constant curvature
Batz, Sascha; Peschel, Ulf
2010-05-15
We consider spatial solitons as, for example, self-confined optical beams in spaces of constant curvature, which are a natural generalization of flat space. Due to the symmetries of these spaces we are able to define respective dynamical parameters, for example, velocity and position. For positively curved space we find stable multiple-hump solitons as a continuation from the linear modes. In the case of negatively curved space we show that no localized solution exists and a bright soliton will always decay through a nonlinear tunneling process.
Double curvature mirrors for linear concentrators
NASA Astrophysics Data System (ADS)
Lance, Tamir; Ackler, Harold; Finot, Marc
2012-10-01
Skyline Solar's medium concentration photovoltaic system uses quasi-parabolic mirrors and one axis tracking. Improvements in levelized cost of energy can be achieved by effective management of non-uniformity of the flux line on the panels. To reduce non uniformity of the flux line due to mirror to mirror gaps, Skyline developed a dual curvature mirror that stretches the flux line along the panel. Extensive modeling and experiments have been conducted to analyze the impact of this new design and to optimize the design.
Curvature sensor for ocular wavefront measurement.
Díaz-Doutón, Fernando; Pujol, Jaume; Arjona, Montserrat; Luque, Sergio O
2006-08-01
We describe a new wavefront sensor for ocular aberration determination, based on the curvature sensing principle, which adapts the classical system used in astronomy for the living eye's measurements. The actual experimental setup is presented and designed following a process guided by computer simulations to adjust the design parameters for optimal performance. We present results for artificial and real young eyes, compared with the Hartmann-Shack estimations. Both methods show a similar performance for these cases. This system will allow for the measurement of higher order aberrations than the currently used wavefront sensors in situations in which they are supposed to be significant, such as postsurgery eyes.
Effects of streamline curvature on separation prediction
NASA Astrophysics Data System (ADS)
Arolla, Sunil K.; Durbin, Paul A.
2009-11-01
In this study, the effects of streamline curvature on prediction of flow separation are investigated. The geometry is a circulation control airfoil, a high-lift configuration that has been under extensive research for more than two decades. A tangential jet is blown over a thick, rounded trailing edge, using the Coanda effect to delay separation. An attempt is made to understand, through numerical simulations, the dynamics of turbulent separation and reattachment on the Coanda surface. Highly curved, attached recirculation regions are seen to form. A physics based curvature correction proposed by Pettersson-Reif et al. (1999) is used in conjunction with ζ-f turbulence model. The chord-based Reynolds number is Re = 10^6. Two jet momentum coefficients of Cμ=0.03 and 0.1 are computed. In this paper, comparisons between the computed and experimental pressure distributions, velocity profiles and the position of flow detachment are presented. Comparisons with other closures such as Menter's SST model are also discussed.
ODE/PDE analysis of corneal curvature.
Płociniczak, Lukasz; Griffiths, Graham W; Schiesser, William E
2014-10-01
The starting point for this paper is a nonlinear, two-point boundary value ordinary differential equation (BVODE) that defines corneal curvature according to a static force balance. A numerical solution to the BVODE is computed by first converting the BVODE to a parabolic partial differential equation (PDE) by adding an initial value (t, pseudo-time) derivative to the BVODE. A numerical solution to the PDE is then computed by the method of lines (MOL) with the calculation proceeding to a sufficiently large value of t such that the derivative in t reduces to essentially zero. The PDE solution at this point is also the solution for the BVODE. This procedure is implemented in R (an open source scientific programming system) and the programming is discussed in some detail. A series approximation to the solution is derived from which an estimate for the rate of convergence is obtained. This is compared to a fitted exponential model. Also, two linear approximations are derived, one of which leads to a closed form solution. Both provide solutions very close to that obtained from the full nonlinear model. An estimate for the cornea radius of curvature is also derived. The paper concludes with a discussion of the features of the solution to the ODE/PDE system.
Vortex motion on surfaces of small curvature
Dorigoni, Daniele Dunajski, Maciej Manton, Nicholas S.
2013-12-15
We consider a single Abelian Higgs vortex on a surface Σ whose Gaussian curvature K is small relative to the size of the vortex, and analyse vortex motion by using geodesics on the moduli space of static solutions. The moduli space is Σ with a modified metric, and we propose that this metric has a universal expansion, in terms of K and its derivatives, around the initial metric on Σ. Using an integral expression for the Kähler potential on the moduli space, we calculate the leading coefficients of this expansion numerically, and find some evidence for their universality. The expansion agrees to first order with the metric resulting from the Ricci flow starting from the initial metric on Σ, but differs at higher order. We compare the vortex motion with the motion of a point particle along geodesics of Σ. Relative to a particle geodesic, the vortex experiences an additional force, which to leading order is proportional to the gradient of K. This force is analogous to the self-force on bodies of finite size that occurs in gravitational motion. -- Highlights: •We study an Abelian Higgs vortex on a surface with small curvature. •A universal expansion for the moduli space metric is proposed. •We numerically check the universality at low orders. •Vortex motion differs from point particle motion because a vortex has a finite size. •Moduli space geometry has similarities with the geometry arising from Ricci flow.
Emergent gravity in spaces of constant curvature
NASA Astrophysics Data System (ADS)
Alvarez, Orlando; Haddad, Matthew
2017-03-01
In physical theories where the energy (action) is localized near a submanifold of a constant curvature space, there is a universal expression for the energy (or the action). We derive a multipole expansion for the energy that has a finite number of terms, and depends on intrinsic geometric invariants of the submanifold and extrinsic invariants of the embedding of the submanifold. This is the second of a pair of articles in which we try to develop a theory of emergent gravity arising from the embedding of a submanifold into an ambient space equipped with a quantum field theory. Our theoretical method requires a generalization of a formula due to by Hermann Weyl. While the first paper discussed the framework in Euclidean (Minkowski) space, here we discuss how this framework generalizes to spaces of constant sectional curvature. We focus primarily on anti de Sitter space. We then discuss how such a theory can give rise to a cosmological constant and Planck mass that are within reasonable bounds of the experimental values.
The effect of a small initial curvature on the free vibration of clamped, rectangular plates
NASA Technical Reports Server (NTRS)
Adeniji-Fashola, A. A.; Oyediran, A. A.
1986-01-01
An analytical method of obtaining the natural frequencies and mode shapes of clamped, rectangular plates having a small initial curvature is presented. Specifically, the singular perturbation technique is used to reduce the fourth-order plate vibration problem to the simpler membrane problem with modified boundary conditions that account for the bending effects. The eigenfrequencies for plates with inverse aspect ratios varying between 0.1 and 1.0 and for the dimensionless normal prestress between 0.1 and 1.0 have been presented for values of epsilon, the normalized bending rigidity, ranging between 0.0010 and 0.2500. It is established that a small initial curvature has no effect on the frequency of vibration of the plate. However, its effect is manifested in the eigenmodes.
NASA Astrophysics Data System (ADS)
Iori, F.; Grechy, L.; Corbett, R. W.; Gedroyc, W.; Duncan, N.; Caro, C. G.; Vincent, P. E.
2015-03-01
Arterio-Venous Fistulae (AVF) are the preferred method of vascular access for patients with end stage renal disease who need hemodialysis. In this study, simulations of blood flow and oxygen transport were undertaken in various idealized AVF configurations. The objective of the study was to understand how arterial curvature affects blood flow and oxygen transport patterns within AVF, with a focus on how curvature alters metrics known to correlate with vascular pathology such as Intimal Hyperplasia (IH). If one subscribes to the hypothesis that unsteady flow causes IH within AVF, then the results suggest that in order to avoid IH, AVF should be formed via a vein graft onto the outer-curvature of a curved artery. However, if one subscribes to the hypothesis that low wall shear stress and/or low lumen-to-wall oxygen flux (leading to wall hypoxia) cause IH within AVF, then the results suggest that in order to avoid IH, AVF should be formed via a vein graft onto a straight artery, or the inner-curvature of a curved artery. We note that the recommendations are incompatible—highlighting the importance of ascertaining the exact mechanisms underlying development of IH in AVF. Nonetheless, the results clearly illustrate the important role played by arterial curvature in determining AVF hemodynamics, which to our knowledge has been overlooked in all previous studies.
Interaction between bending and tension forces in bilayer membranes.
Secomb, T W
1988-01-01
A theoretical analysis is presented of the bending mechanics of a membrane consisting of two tightly-coupled leaflets, each of which shears and bends readily but strongly resists area changes. Structures of this type have been proposed to model biological membranes such as red blood cell membrane. It is shown that when such a membrane is bent, anisotropic components of resultant membrane tension (shear stresses) are induced, even when the tension in each leaflet is isotropic. The induced shear stresses increase as the square of the membrane curvature, and become significant for moderate curvatures (when the radius of curvature is much larger than the distance between the leaflets). This effect has implications for the analysis of shape and deformation of freely suspended and flowing red blood cells. PMID:3224154
Isogrid Membranes for Precise, Singly Curved Reflectors
NASA Technical Reports Server (NTRS)
Fang, Houfei; Lou, Michael
2005-01-01
A new type of composite material has been proposed for membranes that would constitute the reflective surfaces of planned lightweight, single-curvature (e.g., parabolic cylindrical) reflectors for some radar and radio-communication systems. The proposed composite materials would consist of polyimide membranes containing embedded grids of highstrength (e.g., carbon) fibers. The purpose of the fiber reinforcements, as explained in more detail below, is to prevent wrinkling or rippling of the membrane.
Crystallizing Membrane Proteins in Lipidic Mesophases. A Host Lipid Screen
Li, Dianfan; Lee, Jean; Caffrey, Martin
2011-11-30
The default lipid for the bulk of the crystallogenesis studies performed to date using the cubic mesophase method is monoolein. There is no good reason, however, why this 18-carbon, cis-monounsaturated monoacylglycerol should be the preferred lipid for all target membrane proteins. The latter come from an array of biomembrane types with varying properties that include hydrophobic thickness, intrinsic curvature, lateral pressure profile, lipid and protein makeup, and compositional asymmetry. Thus, it seems reasonable that screening for crystallizability based on the identity of the lipid creating the hosting mesophase would be worthwhile. For this, monoacylglycerols with differing acyl chain characteristics, such as length and olefinic bond position, must be available. A lipid synthesis and purification program is in place in the author's laboratory to serve this need. In the current study with the outer membrane sugar transporter, OprB, we demonstrate the utility of host lipid screening as a means for generating diffraction-quality crystals. Host lipid screening is likely to prove a generally useful strategy for mesophase-based crystallization of membrane proteins.
Engineering curvature in graphene ribbons using ultrathin polymer films.
Li, Chunyu; Koslowski, Marisol; Strachan, Alejandro
2014-12-10
We propose a method to induce curvature in graphene nanoribbons in a controlled manner using an ultrathin thermoset polymer in a bimaterial strip setup and test it via molecular dynamics (MD) simulations. Continuum mechanics shows that curvature develops to release the residual stress caused by the chemical and thermal shrinkage of the polymer during processing and that this curvature increases with decreasing film thickness; however, significant deformation is only achieved for ultrathin polymer films. Quite surprisingly, explicit MD simulations of the curing and annealing processes show that the predicted trend not just continues down to film thicknesses of 1-2 nm but that the curvature development is enhanced significantly in such ultrathin films due to surface tension effects. This combination of effects leads to very large curvatures of over 0.14 nm(-1) that can be tuned via film thickness. This provides a new avenue to engineer curvature and, thus, electromagnetic properties of graphene.
ERIC Educational Resources Information Center
Regenwetter, Michel; Dana, Jason; Davis-Stober, Clintin P.
2011-01-01
Transitivity of preferences is a fundamental principle shared by most major contemporary rational, prescriptive, and descriptive models of decision making. To have transitive preferences, a person, group, or society that prefers choice option "x" to "y" and "y" to "z" must prefer "x" to…
Radius of Curvature of Off-Axis Paraboloids
NASA Technical Reports Server (NTRS)
Robinson, Brian; Reardon, Patrick; Hadaway, James; Geary, Joseph; Russell, Kevin (Technical Monitor)
2002-01-01
We present several methods for measuring the vertex radius of curvature of off-axis paraboloidal mirrors. One is based on least-squares fitting of interferometer output, one on comparison of sagittal and tangential radii of curvature, and another on measurement of displacement of the nulled test article from the ideal reference wave. Each method defines radius of curvature differently and, as a consequence, produces its own sort of errors.
Curvature and Tangency Handles for Control of Convex Cubic Shapes
2000-01-01
looked at A-splines constructed with segments of singular al- gebraic cubics, which are just rational cubics, with new, geometrically more meaningful...contact interpolation , and curvatures at three prescribed points, see Figures 1-4. Curve and Surface Design: Saint-Malo 1999 91 Pierre-Jean Laurent...curvature at one contact point. §2. Barycentric Coordinates and Curvature at the Endpoints The general algebraic cubic in cartesian coordinates x, y is
Wrinkles and splay conspire to give positive disclinations negative curvature
Matsumoto, Elisabetta A.; Vega, Daniel A.; Pezzutti, Aldo D.; García, Nicolás A.; Chaikin, Paul M.; Register, Richard A.
2015-01-01
Recently, there has been renewed interest in the coupling between geometry and topological defects in crystalline and striped systems. Standard lore dictates that positive disclinations are associated with positive Gaussian curvature, whereas negative disclinations give rise to negative curvature. Here, we present a diblock copolymer system exhibiting a striped columnar phase that preferentially forms wrinkles perpendicular to the underlying stripes. In free-standing films this wrinkling behavior induces negative Gaussian curvature to form in the vicinity of positive disclinations. PMID:26420873
Fringes of equal tangential inclination by curvature-induced birefringence
NASA Astrophysics Data System (ADS)
Medhat, M.; Hendawy, N. I.; Zaki, A. A.
2003-02-01
A new kind of interference fringes, fringes of equal tangential inclination by curvature-induced birefringence, is presented. These are two-beam interference fringes produced by bending a thin sheet of birefringent material into a part of an exact cylinder such that the curvature is constant. Due to this curvature there is a uniform birefringence being induced. The change in birefringence induced by applying different radii of curvatures to a Fortepan sheet is measured. The stored (fixed) or natural birefringence of this sheet is deduced.
Inconsistency of scale invariant curvature coupled to gravity
Zoller, D.
1990-01-01
We show that the scale invariant curvature action for paths, the point particle version of Polyakov's extrinsic curvature action for surfaces, does not couple consistently to gravity. Although the curvature action for paths yields a massless representation of the Poincare group with fixed helicity and so potentially provides a description of single photons and gravitons, the inconsistent coupling to gravity apparently suggests such a description is not viable. We present a physical interpretation of the inconsistency in terms of the non-localizability of the photon and point out a conceptual kinship between the local symmetry of the curvature theory and the local supersymmetry of a spinning particle or spinning string. 11 refs.
Evolving extrinsic curvature and the cosmological constant problem
NASA Astrophysics Data System (ADS)
Capistrano, Abraão J. S.; Cabral, Luis A.
2016-10-01
The concept of smooth deformation of Riemannian manifolds associated with the extrinsic curvature is explained and applied to the Friedmann-Lemaître-Robertson-Walker cosmology. We show that such deformation can be derived from the Einstein-Hilbert-like dynamical principle may produce an observable effect in the sense of Noether. As a result, we show how the extrinsic curvature compensates both quantitative and qualitative differences between the cosmological constant Λ and the vacuum energy {ρ }{vac} obtaining the observed upper bound for the cosmological constant problem at electroweak scale. The topological characteristics of the extrinsic curvature are discussed showing that the produced extrinsic scalar curvature is an evolving dynamical quantity.
Plane wave gravitons, curvature singularities and string physics
Brooks, R. . Center for Theoretical Physics)
1991-03-21
This paper discusses bounded (compactifying) potentials arising from a conspiracy between plane wave graviton and dilaton condensates. So are string propagation and supersymmetry in spacetimes with curvature singularities.
The curvature index and synchronization of dynamical systems.
Chen, Yen-Sheng; Chang, Chien-Cheng
2012-06-01
We develop a quantity, named the curvature index, for dynamical systems. This index is defined as the limit of the average curvature of the trajectory during evolution, which measures the bending of the curve on an attractor. The curvature index has the ability to differentiate the topological change of an attractor, as its alterations exhibit the structural changes of a dynamical system. Thus, the curvature index may indicate thresholds of some synchronization regimes. The Rössler system and a time-delay system are simulated to demonstrate the effectiveness of the index, respectively.
Multi-scale curvature tensor analysis of machined surfaces
NASA Astrophysics Data System (ADS)
Bartkowiak, Tomasz; Brown, Christopher
2016-12-01
This paper demonstrates the use of multi-scale curvature analysis, an areal new surface characterization technique for better understanding topographies, for analyzing surfaces created by conventional machining and grinding. Curvature, like slope and area, changes with scale of observation, or calculation, on irregular surfaces, therefore it can be used for multi-scale geometric analysis. Curvatures on a surface should be indicative of topographically dependent behavior of a surface and curvatures are, in turn, influenced by the processing and use of the surface. Curvatures have not been well characterized previously. Curvature has been used for calculations in contact mechanics and for the evaluation of cutting edges. In the current work two parts were machined and then one of them was ground. The surface topographies were measured with a scanning laser confocal microscope. Plots of curvatures as a function of position and scale are presented, and the means and standard deviations of principal curvatures are plotted as a function of scale. Statistical analyses show the relations between curvature and these two manufacturing processes at multiple scales.
Evolution of a Rippled Membrane during Phospholipase A2 Hydrolysis Studied by Time-Resolved AFM
Leidy, Chad; Mouritsen, Ole G.; Jørgensen, Kent; Peters, Günther H.
2004-01-01
The sensitivity of phospholipase A2 (PLA2) for lipid membrane curvature is explored by monitoring, through time-resolved atomic force microscopy, the hydrolysis of supported double bilayers in the ripple phase. The ripple phase presents a corrugated morphology. PLA2 is shown to have higher activity toward the ripple phase compared to the gel phase in 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) membranes, indicating its preference for this highly curved membrane morphology. Hydrolysis of the stable and metastable ripple structures is monitored for equimolar DMPC/1,2-distearoyl-sn-glycero-3-phosphocholine (DSPC)-supported double bilayers. As shown by high-performance liquid chromatography results, DSPC is resistant to hydrolysis at this temperature, resulting in a more gradual hydrolysis of the surface that leads to a change in membrane morphology without loss of membrane integrity. This is reflected in an increase in ripple spacing, followed by a sudden flattening of the lipid membrane during hydrolysis. Hydrolysis of the ripple phase results in anisotropic holes running parallel to the ripples, suggesting that the ripple phase has strip regions of higher sensitivity to enzymatic attack. Bulk high-performance liquid chromatography measurements indicate that PLA2 preferentially hydrolyzes DMPC in the DMPC/DSPC ripples. We suggest that this leads to the formation of a flat gel-phase lipid membrane due to enrichment in DSPC. The results point to the ability of PLA2 for inducing a compositional phase transition in multicomponent membranes through preferential hydrolysis while preserving membrane integrity. PMID:15240475
Malinin, Vladimir S.; Lentz, Barry R.
2004-01-01
We reported previously the effects of both osmotic and curvature stress on fusion between poly(ethylene glycol)-aggregated vesicles. In this article, we analyze the energetics of fusion of vesicles of different curvature, paying particular attention to the effects of osmotic stress on small, highly curved vesicles of 26 nm diameter, composed of lipids with negative intrinsic curvature. Our calculations show that high positive curvature of the outer monolayer “charges” these vesicles with excess bending energy, which then releases during stalk expansion (increase of the stalk radius, rs) and thus “drives” fusion. Calculations based on the known mechanical properties of lipid assemblies suggest that the free energy of “void” formation as well as membrane-bending free energy dominate the evolution of a stalk to an extended transmembrane contact. The free-energy profile of stalk expansion (free energy versus rs) clearly shows the presence of two metastable intermediates (intermediate 1 at rs ∼0 − 1.0 nm and intermediate 2 at rs ∼2.5 − 3.0 nm). Applying osmotic gradients of ±5 atm, when assuming a fixed trans-bilayer lipid mass distribution, did not significantly change the free-energy profile. However, inclusion in the model of an additional degree of freedom, the ability of lipids to move into and out of the “void”, made the free-energy profile strongly dependent on the osmotic gradient. Vesicle expansion increased the energy barrier between intermediates by ∼4 kT and the absolute value of the barrier by ∼7 kT, whereas compression decreased it by nearly the same extent. Since these calculations, which are based on the stalk hypothesis, correctly predict the effects of both membrane curvature and osmotic stress, they support the stalk hypothesis for the mechanism of membrane fusion and suggest that both forms of stress alter the final stages, rather than the initial step, of the fusion process, as previously suggested. PMID:15111411
Schell, William J.
1979-01-01
A dry, fabric supported, polymeric gas separation membrane, such as cellulose acetate, is prepared by casting a solution of the polymer onto a shrinkable fabric preferably formed of synthetic polymers such as polyester or polyamide filaments before washing, stretching or calendering (so called griege goods). The supported membrane is then subjected to gelling, annealing, and drying by solvent exchange. During the processing steps, both the fabric support and the membrane shrink a preselected, controlled amount which prevents curling, wrinkling or cracking of the membrane in flat form or when spirally wound into a gas separation element.
Hawking temperature of constant curvature black holes
Cai Ronggen; Myung, Yun Soo
2011-05-15
The constant curvature (CC) black holes are higher dimensional generalizations of Banados-Teitelboim-Zanelli black holes. It is known that these black holes have the unusual topology of M{sub D-1}xS{sup 1}, where D is the spacetime dimension and M{sub D-1} stands for a conformal Minkowski spacetime in D-1 dimensions. The unusual topology and time-dependence for the exterior of these black holes cause some difficulties to derive their thermodynamic quantities. In this work, by using a globally embedding approach, we obtain the Hawking temperature of the CC black holes. We find that the Hawking temperature takes the same form when using both the static and global coordinates. Also, it is identical to the Gibbons-Hawking temperature of the boundary de Sitter spaces of these CC black holes.
Band geometry, Berry curvature, and superfluid weight
NASA Astrophysics Data System (ADS)
Liang, Long; Vanhala, Tuomas I.; Peotta, Sebastiano; Siro, Topi; Harju, Ari; Törmä, Päivi
2017-01-01
We present a theory of the superfluid weight in multiband attractive Hubbard models within the Bardeen-Cooper-Schrieffer (BCS) mean-field framework. We show how to separate the geometric contribution to the superfluid weight from the conventional one, and that the geometric contribution is associated with the interband matrix elements of the current operator. Our theory can be applied to systems with or without time-reversal symmetry. In both cases the geometric superfluid weight can be related to the quantum metric of the corresponding noninteracting systems. This leads to a lower bound on the superfluid weight given by the absolute value of the Berry curvature. We apply our theory to the attractive Kane-Mele-Hubbard and Haldane-Hubbard models, which can be realized in ultracold atom gases. Quantitative comparisons are made to state of the art dynamical mean-field theory and exact diagonalization results.
Gaussian and mean curvatures for discrete asymptotic nets
NASA Astrophysics Data System (ADS)
Schief, W. K.
2017-04-01
We propose discretisations of Gaussian and mean curvatures of surfaces parametrised in terms of asymptotic coordinates and examine their relevance in the context of integrable discretisations of classical classes of surfaces and their underlying integrable systems. We also record discrete analogues of the classical relation between the Gaussian curvature of hyperbolic surfaces and the torsion of their asymptotic lines.
An analytical approach to estimate curvature effect of coseismic deformations
NASA Astrophysics Data System (ADS)
Dong, Jie; Sun, Wenke; Zhou, Xin; Wang, Rongjiang
2016-08-01
We present an analytical approach to compute the curvature effect by the new analytical solutions of coseismic deformation derived for the homogeneous sphere model. We consider two spheres with different radii: one is the same as earth and the other with a larger radius can approximate a half-space model. Then, we calculate the coseismic displacements for the two spheres and define the relative percentage of the displacements as the curvature effect. The near-field curvature effect is defined relative to the maximum coseismic displacement. The results show that the maximum curvature effect is about 4 per cent for source depths of less than 100 km, and about 30 per cent for source depths of less than 600 km. For the far-field curvature effect, we define it relative to the observing point. The curvature effect is extremely large and sometimes exceeds 100 per cent. Moreover, this new approach can be used to estimate any planet's curvature effect quantitatively. For a smaller sphere, such as the Moon, the curvature effect is much larger than that of the Earth, with an inverse ratio to the earth's radius.
Coherent gradient sensing method and system for measuring surface curvature
NASA Technical Reports Server (NTRS)
Rosakis, Ares J. (Inventor); Singh, Ramen P. (Inventor); Kolawa, Elizabeth (Inventor); Moore, Jr., Nicholas R. (Inventor)
2000-01-01
A system and method for determining a curvature of a specularly reflective surface based on optical interference. Two optical gratings are used to produce a spatial displacement in an interference field of two different diffraction components produced by one grating from different diffraction components produced by another grating. Thus, the curvature of the surface can be determined.
Curvature dependence of the interfacial heat and mass transfer coefficients
NASA Astrophysics Data System (ADS)
Glavatskiy, K. S.; Bedeaux, D.
2014-03-01
Nucleation is often accompanied by heat transfer between the surroundings and a nucleus of a new phase. The interface between two phases gives an additional resistance to this transfer. For small nuclei the interfacial curvature is high, which affects not only equilibrium quantities such as surface tension, but also the transport properties. In particular, high curvature affects the interfacial resistance to heat and mass transfer. We develop a framework for determining the curvature dependence of the interfacial heat and mass transfer resistances. We determine the interfacial resistances as a function of a curvature. The analysis is performed for a bubble of a one-component fluid and may be extended to various nuclei of multicomponent systems. The curvature dependence of the interfacial resistances is important in modeling transport processes in multiphase systems.
Effect of curvature on cholesteric liquid crystals in toroidal geometries
NASA Astrophysics Data System (ADS)
Fialho, Ana R.; Bernardino, Nelson R.; Silvestre, Nuno M.; Telo da Gama, Margarida M.
2017-01-01
The confinement of liquid crystals inside curved geometries leads to exotic structures, with applications ranging from biosensors to optical switches and privacy windows. Here we study how curvature affects the alignment of a cholesteric liquid crystal. We model the system on the mesoscale using the Landau-de Gennes model. Our study was performed in three stages, analyzing different curved geometries from cylindrical walls and pores, to toroidal domains, in order to isolate the curvature effects. Our results show that the stresses introduced by the curvature influence the orientation of the liquid crystal molecules, and cause distortions in the natural periodicity of the cholesteric that depend on the radius of curvature, on the pitch, and on the dimensions of the system. In particular, the cholesteric layers of toroidal droplets exhibit a symmetry breaking not seen in cylindrical pores and that is driven by the additional curvature.
Nastic curvatures of wheat coleoptiles that develop in true microgravity
NASA Technical Reports Server (NTRS)
Heathcote, D. G.; Chapman, D. K.; Brown, A. H.
1995-01-01
Dark-grown wheat coleoptiles developed strong curvatures within 5 h of being transferred in orbit from a 1 g centrifuge to microgravity during an experiment flown on the IML-1 shuttle mission. The curving tendency was strongest in seedlings that were immature, with coleoptiles shorter than 10 mm at the time of transfer. The curvature direction was non-random, and directed away from the caryopsis (the coleptile face adjacent to the caryopsis becoming convex). The curvatures were most marked in the basal third of the coleoptiles, contrasting with phototropic responses, which occur in the apical third. We interpret these curvatures as being nastic, and related to the curvatures commonly reported to occur during clinostat rotation treatments.
Effects of Iris Surface Curvature on Iris Recognition
Thompson, Joseph T; Flynn, Patrick J; Bowyer, Kevin W; Santos-Villalobos, Hector J
2013-01-01
To focus on objects at various distances, the lens of the eye must change shape to adjust its refractive power. This change in lens shape causes a change in the shape of the iris surface which can be measured by examining the curvature of the iris. This work isolates the variable of iris curvature in the recognition process and shows that differences in iris curvature degrade matching ability. To our knowledge, no other work has examined the effects of varying iris curvature on matching ability. To examine this degradation, we conduct a matching experiment across pairs of images with varying degrees of iris curvature differences. The results show a statistically signi cant degradation in matching ability. Finally, the real world impact of these ndings is discussed
Curvature-processing network in macaque visual cortex
Yue, Xiaomin; Pourladian, Irene S.; Tootell, Roger B. H.; Ungerleider, Leslie G.
2014-01-01
Our visual environment abounds with curved features. Thus, the goal of understanding visual processing should include the processing of curved features. Using functional magnetic resonance imaging in behaving monkeys, we demonstrated a network of cortical areas selective for the processing of curved features. This network includes three distinct hierarchically organized regions within the ventral visual pathway: a posterior curvature-biased patch (PCP) located in the near-foveal representation of dorsal V4, a middle curvature-biased patch (MCP) located on the ventral lip of the posterior superior temporal sulcus (STS) in area TEO, and an anterior curvature-biased patch (ACP) located just below the STS in anterior area TE. Our results further indicate that the processing of curvature becomes increasingly complex from PCP to ACP. The proximity of the curvature-processing network to the well-known face-processing network suggests a possible functional link between them. PMID:25092328
Curvature sensor based on a Fabry-Perot interferometer
NASA Astrophysics Data System (ADS)
Monteiro, Catarina; Ferreira, Marta S.; Kobelke, Jens; Schuster, Kay; Bierlich, Jörg; Frazão, Orlando
2016-05-01
A curvature sensor based on a Fabry-Perot interferometer is proposed. A capillary tube of silica is fusion spliced between two single mode fibers, producing a Fabry-Perot cavity. The light propagates in air, when passing through the capillary tube. Two different cavities are subjected to curvature and temperature. The cavity with shorter length shows insensitivity to both measurands. The larger cavity shows two operating regions for curvature measurement, where a linear response is shown, with a maximum sensitivity of 18.77pm/m-1 for the high curvature radius range. When subjected to temperature, the sensing head produces a similar response for different curvature radius, with a sensitivity of 0.87pm/°C.
Nastic curvatures of wheat coleoptiles that develop in true microgravity.
Heathcote, D G; Chapman, D K; Brown, A H
1995-07-01
Dark-grown wheat coleoptiles developed strong curvatures within 5 h of being transferred in orbit from a 1 g centrifuge to microgravity during an experiment flown on the IML-1 shuttle mission. The curving tendency was strongest in seedlings that were immature, with coleoptiles shorter than 10 mm at the time of transfer. The curvature direction was non-random, and directed away from the caryopsis (the coleptile face adjacent to the caryopsis becoming convex). The curvatures were most marked in the basal third of the coleoptiles, contrasting with phototropic responses, which occur in the apical third. We interpret these curvatures as being nastic, and related to the curvatures commonly reported to occur during clinostat rotation treatments.
Robust pupil center detection using a curvature algorithm
NASA Technical Reports Server (NTRS)
Zhu, D.; Moore, S. T.; Raphan, T.; Wall, C. C. (Principal Investigator)
1999-01-01
Determining the pupil center is fundamental for calculating eye orientation in video-based systems. Existing techniques are error prone and not robust because eyelids, eyelashes, corneal reflections or shadows in many instances occlude the pupil. We have developed a new algorithm which utilizes curvature characteristics of the pupil boundary to eliminate these artifacts. Pupil center is computed based solely on points related to the pupil boundary. For each boundary point, a curvature value is computed. Occlusion of the boundary induces characteristic peaks in the curvature function. Curvature values for normal pupil sizes were determined and a threshold was found which together with heuristics discriminated normal from abnormal curvature. Remaining boundary points were fit with an ellipse using a least squares error criterion. The center of the ellipse is an estimate of the pupil center. This technique is robust and accurately estimates pupil center with less than 40% of the pupil boundary points visible.
Use of autologous grafts in the treatment of acquired penile curvature: An experience of 33 cases
Khawaja, Abdul Rouf; Dar, Tanveer Iqbal; Zahur, Suhael; Tariq, Sheikh; Hamid, Arf; Wani, M. S.; Wazir, B. S.; Iqbal, Arsheed
2016-01-01
Aim: The objective was to compare the use of autologous dermal and temporalis fascia grafts in the treatment of acquired penile curvatures. Materials and Methods: It was a prospective observational study of 33 cases, conducted in Sher-i-Kashmir Institute of Medical Sciences, Srinagar from March 2007 to September 2013. All the patients had stable Peyronies disease (PD). Dorsal, dorsolateral and vental curvatures with good preoperative erections were included. PD index with visual analog scales for curvature was used preoperatively. An informed written consent was taken from all the patients with main emphasis on erectile dysfunction. Results: After an average follow up of 2 years, complete straightening of penis was observed in all patients with satisfactory sexual intercourse in 30 patients (90%). Three patients (10%) required frequent use of type 5 phosphodiesterase inhibitors for adequate erections. Overall 91% of patients and partners were satisfied with the procedure and cosmetically donor site was better in temporalis fascia graft site. No rejection of any graft was noted and glans hypoesthesia was noticed in 4 patients (12%). None of the patients required penile prosthesis. Total operative time for harvesting and application of the graft was more in dermal grafts (>3 hrs) than for temporalis fascia graft (2 hrs). Conclusion: Tunical lengthening procedures by autologous free grafts represents a safe and reproducible technique. A good preoperative erectile function is required for tunical lengthening procedure. Temporalis fascia graft is thin, tough membrane and effective graft for PD with good cosmetic and functional results. PMID:27141196
Tests and evaluation of a variable focus liquid lens for curvature wavefront sensors in astronomy.
Fuentes-Fernández, Jorge; Cuevas, Salvador; Álvarez-Nuñez, Luis C; Watson, Alan
2013-10-20
Curvature wavefront sensors (WFSs), which obtain the wavefront aberrations from two defocused intensity images at each side of the pupil plane, have shown to be highly efficient for astronomical applications. We propose here an alternative defocusing mechanism for curvature sensors, based on an electrowetting-based variable focus liquid lens. Typically, the sampling rates of a WFS for active optics are of the order of 0.01 Hz, and the focus modulation can be done by simply moving the detector back and forth. On the other hand, adaptive optics may require speeds of up to several hundred hertz, and the modulation is then done by using a fast vibrating membrane mirror. We believe variable focus liquid lenses may be able to perform this focus modulation, reducing the overall size of the system and without the need of extra moving parts. We have done a full characterization of the Varioptic Arctic 416 liquid lens, and we have evaluated its potential performance in different curvature configurations.
Membrane stiffness is modified by integral membrane proteins.
Fowler, Philip W; Hélie, Jean; Duncan, Anna; Chavent, Matthieu; Koldsø, Heidi; Sansom, Mark S P
2016-09-20
The ease with which a cell membrane can bend and deform is important for a wide range of biological functions. Peripheral proteins that induce curvature in membranes (e.g. BAR domains) have been studied for a number of years. Little is known, however, about the effect of integral membrane proteins on the stiffness of a membrane (characterised by the bending rigidity, Kc). We demonstrate by computer simulation that adding integral membrane proteins at physiological densities alters the stiffness of the membrane. First we establish that the coarse-grained MARTINI forcefield is able to accurately reproduce the bending rigidity of a small patch of 1500 phosphatidyl choline lipids by comparing the calculated value to both experiment and an atomistic simulation of the same system. This enables us to simulate the dynamics of large (ca. 50 000 lipids) patches of membrane using the MARTINI coarse-grained description. We find that altering the lipid composition changes the bending rigidity. Adding integral membrane proteins to lipid bilayers also changes the bending rigidity, whilst adding a simple peripheral membrane protein has no effect. Our results suggest that integral membrane proteins can have different effects, and in the case of the bacterial outer membrane protein, BtuB, the greater the density of protein, the larger the reduction in stiffness.
Measuring Children's Food Preferences.
ERIC Educational Resources Information Center
Birch, Leann L.; Sullivan, Susan A.
1991-01-01
Measures of preference are useful predictors of children's food consumption patterns. The paper discusses children's affective response to food and describes the preference assessment procedure which obtains information on children's likes and dislikes. The methodology helps investigate factors influencing development of preferences and food…
Substituted polyacetylene separation membrane
Pinnau, I.; Morisato, Atsushi
1998-01-13
A separation membrane is described which is useful for gas separation, particularly separation of C{sub 2+} hydrocarbons from natural gas. The invention encompasses the membrane itself, methods of making it and processes for using it. The membrane comprises a polymer having repeating units of a hydrocarbon-based, disubstituted polyacetylene, having the general formula shown in the accompanying diagram, wherein R{sub 1} is chosen from the group consisting of C{sub 1}-C{sub 4} alkyl and phenyl, and wherein R{sub 2} is chosen from the group consisting of hydrogen and phenyl. In the most preferred embodiment, the membrane comprises poly(4-methyl-2-pentyne) [PMP]. The membrane exhibits good chemical resistance and has super-glassy properties with regard to separating certain large, condensable permeant species from smaller, less-condensable permeant species. The membranes may also be useful in other fluid separations. 4 figs.
Substituted polyacetylene separation membrane
Pinnau, Ingo; Morisato, Atsushi
1998-01-13
A separation membrane useful for gas separation, particularly separation of C.sub.2+ hydrocarbons from natural gas. The invention encompasses the membrane itself, methods of making it and processes for using it. The membrane comprises a polymer having repeating units of a hydrocarbon-based, disubstituted polyacetylene, having the general formula: ##STR1## wherein R.sub.1 is chosen from the group consisting of C.sub.1 -C.sub.4 alkyl and phenyl, and wherein R.sub.2 is chosen from the group consisting of hydrogen and phenyl. In the most preferred embodiment, the membrane comprises poly(4-methyl-2-pentyne) ›PMP!. The membrane exhibits good chemical resistance and has super-glassy properties with regard to separating certain large, condensable permeant species from smaller, less-condensable permeant species. The membranes may also be useful in other fluid separations.
Mean curvature flow of a hyperbolic surface
Ovchinnikov, Yu. N.; Sigal, I. M.
2011-12-15
A four-parameter family of self-similar solutions is obtained to the mean curvature flow equation for a surface. This family is shown to be stable with respect to a small deformation of a hyperbolic surface. At time instant t*, a singular point is formed within a finite time interval, that is accompanied by a change in the topology of the surface. The solution is continued beyond the singular point. A relationship between the parameters describing the hyperbolic surface before and after the change in the surface topology is obtained. A particular case is analyzed when the unperturbed surface is a cylinder. A cylindrical surface is weakly unstable with respect to a perturbation in the form of a 'wide neck.' At the final stage of the development of the neck when its transverse size becomes much less than the cylinder radius at large distances from the neck, the surface flow in a wide region in the neighborhood of the neck is described by a universal two-parameter family of self-similar solutions. These solutions are stable with respect to small perturbations of the surface.
Actin filament curvature biases branching direction
NASA Astrophysics Data System (ADS)
Wang, Evan; Risca, Viviana; Chaudhuri, Ovijit; Chia, Jia-Jun; Geissler, Phillip; Fletcher, Daniel
2012-02-01
Actin filaments are key components of the cellular machinery, vital for a wide range of processes ranging from cell motility to endocytosis. Actin filaments can branch, and essential in this process is a protein complex known as the Arp2/3 complex, which nucleate new ``daughter'' filaments from pre-existing ``mother'' filaments by attaching itself to the mother filament. Though much progress has been made in understanding the Arp2/3-actin junction, some very interesting questions remain. In particular, F-actin is a dynamic polymer that undergoes a wide range of fluctuations. Prior studies of the Arp2/3-actin junction provides a very static notion of Arp2/3 binding. The question we ask is how differently does the Arp2/3 complex interact with a straight filament compared to a bent filament? In this study, we used Monte Carlo simulations of a surface-tethered worm-like chain to explore possible mechanisms underlying the experimental observation that there exists preferential branch formation by the Arp2/3 complex on the convex face of a curved filament. We show that a fluctuation gating model in which Arp2/3 binding to the actin filament is dependent upon a rare high-local-curvature shape fluctuation of the filament is consistent with the experimental data.
Berry curvature and various thermal Hall effects
NASA Astrophysics Data System (ADS)
Zhang, Lifa
2016-10-01
Applying the approach of semiclassical wave packet dynamics, we study various thermal Hall effects where carriers can be electron, phonon, magnon, etc. A general formula of thermal Hall conductivity is obtained to provide an essential physics for various thermal Hall effects, where the Berry phase effect manifests naturally. All the formulas of electron thermal Hall effect, phonon Hall effect, and magnon Hall effect can be directly reproduced from the general formula. It is also found that the Strěda formula can not be directly applied to the thermal Hall effects, where only the edge magnetization contributes to the Hall effects. Furthermore, we obtain a combined formula for anomalous Hall conductivity, thermal Hall electronic conductivity and thermal Hall conductivity for electron systems, where the Berry curvature is weighted by a different function. Finally, we discuss particle magnetization and its relation to angular momentum of the carrier, change of which could induce a mechanical rotation; and possible experiments for thermal Hall effect associated with a mechanical rotation are also proposed.
BICEP2, the curvature perturbation and supersymmetry
Lyth, David H.
2014-11-01
The tensor fraction r ≅ 0.16 found by BICEP2 corresponds to a Hubble parameter H ≅ 1.0 × 10{sup 14} GeV during inflation. This has two implications for the (single-field) slow-roll inflation hypothesis. First, the inflaton perturbation must account for much more than 10% of the curvature perturbation ζ, which barring fine-tuning means that it accounts for practically all of it. It follows that a curvaton-like mechanism for generating ζ requires an alternative to slow roll such as k-inflation. Second, accepting slow-roll inflation, the excursion of the inflaton field is at least of order Planck scale. As a result, the flatness of the inflaton presumably requires a shift symmetry. I point out that if such is the case, the resulting potential is likely to have at least approximately the quadratic form suggested in 1983 by Linde, which is known to be compatible with the observed r as well as the observed spectral index n{sub s}. The shift symmetry does not require supersymmetry. Also, the big H may rule out a GUT by restoring the symmetry and producing fatal cosmic strings. The absence of a GUT would correspond to the absence of superpartners for the Standard Model particles, which indeed have yet to be found at the LHC.
Cosmic acceleration from matter-curvature coupling
NASA Astrophysics Data System (ADS)
Zaregonbadi, Raziyeh; Farhoudi, Mehrdad
2016-10-01
We consider f( {R,T} ) modified theory of gravity in which, in general, the gravitational Lagrangian is given by an arbitrary function of the Ricci scalar and the trace of the energy-momentum tensor. We indicate that in this type of the theory, the coupling energy-momentum tensor is not conserved. However, we mainly focus on a particular model that matter is minimally coupled to the geometry in the metric formalism and wherein, its coupling energy-momentum tensor is also conserved. We obtain the corresponding Raychaudhuri dynamical equation that presents the evolution of the kinematic quantities. Then for the chosen model, we derive the behavior of the deceleration parameter, and show that the coupling term can lead to an acceleration phase after the matter dominated phase. On the other hand, the curvature of the universe corresponds with the deviation from parallelism in the geodesic motion. Thus, we also scrutinize the motion of the free test particles on their geodesics, and derive the geodesic deviation equation in this modified theory to study the accelerating universe within the spatially flat FLRW background. Actually, this equation gives the relative accelerations of adjacent particles as a measurable physical quantity, and provides an elegant tool to investigate the timelike and the null structures of spacetime geometries. Then, through the null deviation vector, we find the observer area-distance as a function of the redshift for the chosen model, and compare the results with the corresponding results obtained in the literature.
Cosmological spatial curvature probed by microwave polarization
Matzner, R.A.; Tolman, B.W.
1982-11-15
If there is a large-scale anisotropy in the expansion of the universe, the microwave background radiation is expected to be linearly polarized. This communication shows that spatial curvature is capable of rotating the polarization of the microwaves relative to its direction at last scattering, which is directly correlated with the expansion anisotropy (and so also the observed intensity anisotropy). In Friedmann-Robertson-Walker models of the universe with additional small expansion anisotropy, the observed rotation relative to the intensity anisotropy would be appreciable and constant over the celestial sphere in the closed (type IX) model, but in the flat and open models, it must either vanish (types I and V) or vary ina complicated way over the celestial sphere (type VII/sub h/). These facts suggest a clear observational test of the closure of the universe. Also, an ambiguity inherent in the homogeneity of the universe does not allow prediction of the direction of rotation; thus homogeneous universes possess a property which might be called ''handedness.''
Programming curvature using origami tessellations.
Dudte, Levi H; Vouga, Etienne; Tachi, Tomohiro; Mahadevan, L
2016-05-01
Origami describes rules for creating folded structures from patterns on a flat sheet, but does not prescribe how patterns can be designed to fit target shapes. Here, starting from the simplest periodic origami pattern that yields one-degree-of-freedom collapsible structures-we show that scale-independent elementary geometric constructions and constrained optimization algorithms can be used to determine spatially modulated patterns that yield approximations to given surfaces of constant or varying curvature. Paper models confirm the feasibility of our calculations. We also assess the difficulty of realizing these geometric structures by quantifying the energetic barrier that separates the metastable flat and folded states. Moreover, we characterize the trade-off between the accuracy to which the pattern conforms to the target surface, and the effort associated with creating finer folds. Our approach enables the tailoring of origami patterns to drape complex surfaces independent of absolute scale, as well as the quantification of the energetic and material cost of doing so.
Gradient expansion, curvature perturbations, and magnetized plasmas
Giovannini, Massimo; Rezaei, Zahra
2011-04-15
The properties of magnetized plasmas are always investigated under the hypothesis that the relativistic inhomogeneities stemming from the fluid sources and from the geometry itself are sufficiently small to allow for a perturbative description prior to photon decoupling. The latter assumption is hereby relaxed and predecoupling plasmas are described within a suitable expansion where the inhomogeneities are treated to a given order in the spatial gradients. It is argued that the (general relativistic) gradient expansion shares the same features of the drift approximation, customarily employed in the description of cold plasmas, so that the two schemes are physically complementary in the large-scale limit and for the low-frequency branch of the spectrum of plasma modes. The two-fluid description, as well as the magnetohydrodynamical reduction, is derived and studied in the presence of the spatial gradients of the geometry. Various solutions of the coupled system of evolution equations in the anti-Newtonian regime and in the quasi-isotropic approximation are presented. The relation of this analysis to the so-called separate universe paradigm is outlined. The evolution of the magnetized curvature perturbations in the nonlinear regime is addressed for the magnetized adiabatic mode in the plasma frame.
How some proteins tubulate membranes
NASA Astrophysics Data System (ADS)
Bassereau, Patricia
2009-03-01
Endocytosis, exocytosis, membrane transport between intracellular compartments, virus or toxin entry or exit out of the cell, all imply to deform membrane. Membrane deformation mechanisms of cell membranes by proteins are currently actively studied. Giant vesicles (GUV) are interesting model membrane systems because they are composed of a very limited number of components compared to cellular membranes. The deformations induced by the interaction with a specific protein or any other additional components to the system, can then be directly monitored and the deformation mechanism eventually understood. In this talk, we will focus on different tubular structures induced by proteins. We will show that the B-subunits of Shiga toxin or Cholera Toxin, binding to their lipid receptors, Gb3 or GM1 respectively, incorporated in GUV membrane, induce negative membrane curvature and form tubular invaginations, in absence of any other cellular machinery. Tubular structures can also be obtained when molecular motors walking along microtubules exert a pulling force on the membrane of GUV. The helicoidal assembly of dynamin, a protein involved in vivo in membrane fission can also produce tubular structures. This assembly has been reconstituted around membrane nanotubes of controlled diameter; we will show that the initial tube diameter strongly influences dynamin polymerisation. In each case, a physical framework for understanding deformation mechanism will be presented
Tourdot, Richard W.; Ramakrishnan, N.; Baumgart, Tobias; Radhakrishnan, Ravi
2016-01-01
We investigate the phenomenon of protein-induced tubulation of lipid bilayer membranes within a continuum framework using Monte Carlo simulations coupled with the Widom insertion technique to compute excess chemical potentials. Tubular morphologies are spontaneously formed when the density and the curvature-field strength of the membrane-bound proteins exceed their respective thresholds and this transition is marked by a sharp drop in the excess chemical potential. We find that the planar to tubular transition can be described by a micellar model and that the corresponding free-energy barrier increases with an increase in the curvature-field strength (i.e., of protein-membrane interactions) and also with an increase in membrane tension. PMID:26565280
NASA Astrophysics Data System (ADS)
Tourdot, Richard W.; Ramakrishnan, N.; Baumgart, Tobias; Radhakrishnan, Ravi
2015-10-01
We investigate the phenomenon of protein-induced tubulation of lipid bilayer membranes within a continuum framework using Monte Carlo simulations coupled with the Widom insertion technique to compute excess chemical potentials. Tubular morphologies are spontaneously formed when the density and the curvature-field strength of the membrane-bound proteins exceed their respective thresholds and this transition is marked by a sharp drop in the excess chemical potential. We find that the planar to tubular transition can be described by a micellar model and that the corresponding free-energy barrier increases with an increase in the curvature-field strength (i.e., of protein-membrane interactions) and also with an increase in membrane tension.
Controllable curvature from planar polymer sheets in response to light.
Hubbard, Amber M; Mailen, Russell W; Zikry, Mohammed A; Dickey, Michael D; Genzer, Jan
2017-02-24
The ability to change shape and control curvature in 3D structures starting from planar sheets can aid in assembly and add functionality to an object. Herein, we convert planar sheets of shape memory polymers (SMPs) into 3D objects with controllable curvature by dictating where the sheets shrink. Ink patterned on the surface of the sheet absorbs infrared (IR) light, resulting in localized heating, and the material shrinks locally wherever the temperature exceeds the activation temperature, Ta. We introduce two different mechanisms for controlling curvature within SMP sheets. The 'direct' mechanism uses localized shrinkage to induce curvature only in regions patterned with ink. The 'indirect' mechanism uses localized shrinkage in regions patterned with ink to induce curvature in neighboring regions without ink through a balance of internal stresses. Finite element analysis predicts the final shape of the polymer sheets with excellent qualitative agreement with experimental studies. Results from this study show that curvature can be controlled by the distribution and darkness of the ink pattern on the polymer sheet. Additionally, we utilize the direct and indirect curvature mechanisms to demonstrate the formation and actuation of gripper devices, which represent the potential utility of this approach.
Effect of curvature on domain wall motion in elliptical nanorings
NASA Astrophysics Data System (ADS)
Kaya, Fikriye Idil; Bickel, Jessica; Aidala, Katherine
2014-03-01
Understanding domain wall (DW) motion in ferromagnetic nanostructures is important to realize proposed magnetic data storage and logic devices. We investigate the effect of curvature on DW pinning and motion by studying elliptical rings using micromagnetic simulations. Elliptical rings with constant width have varying curvature, with the lowest curvature at the minor axis, and the greatest curvature at the major axis. DWs can be created at any angular position within the ellipse by the application of an appropriate uniform magnetic field. However, only some of these positions are stable when the field is removed. We study the stability and depinning of the DWs by applying a slowly increasing elliptical magnetic field to determine the magnitude of the field at which the DWs begin to move. By varying the major to minor axis ratio, we examine the effect of curvature on DW pinning. A larger field is required to move DWs in regions of higher curvature (near the major axis) than lower curvature (near the minor axis). Overall, we see that increasing the major to minor axis ratio of elliptical nanorings requires increasing field strength to depin the DWs along the major axis. Work supported in part by NSF DMR-1207924 and NSF CMMI-1025020. Simulations performed at the CNS computational facilities at Harvard University, a member of the NNIN supported by NSF Award No. ECS-0335765.
On 3-gauge transformations, 3-curvatures, and Gray-categories
Wang, Wei
2014-04-15
In the 3-gauge theory, a 3-connection is given by a 1-form A valued in the Lie algebra g, a 2-form B valued in the Lie algebra h, and a 3-form C valued in the Lie algebra l, where (g,h,l) constitutes a differential 2-crossed module. We give the 3-gauge transformations from one 3-connection to another, and show the transformation formulae of the 1-curvature 2-form, the 2-curvature 3-form, and the 3-curvature 4-form. The gauge configurations can be interpreted as smooth Gray-functors between two Gray 3-groupoids: the path 3-groupoid P{sub 3}(X) and the 3-gauge group G{sup L} associated to the 2-crossed module L, whose differential is (g,h,l). The derivatives of Gray-functors are 3-connections, and the derivatives of lax-natural transformations between two such Gray-functors are 3-gauge transformations. We give the 3-dimensional holonomy, the lattice version of the 3-curvature, whose derivative gives the 3-curvature 4-form. The covariance of 3-curvatures easily follows from this construction. This Gray-categorical construction explains why 3-gauge transformations and 3-curvatures have the given forms. The interchanging 3-arrows are responsible for the appearance of terms with the Peiffer commutator (, )
Influence of Coanda surface curvature on performance of bladeless fan
NASA Astrophysics Data System (ADS)
Li, Guoqi; Hu, Yongjun; Jin, Yingzi; Setoguchi, Toshiaki; Kim, Heuy Dong
2014-10-01
The unique Coanda surface has a great influence on the performance of bladeless fan. However, there is few studies to explain the relationship between the performance and Coanda surface curvature at present. In order to gain a qualitative understanding of effect of the curvature on the performance of bladeless fan, numerical studies are performed in this paper. Firstly, three-dimensional numerical simulation is done by Fluent software. For the purpose to obtain detailed information of the flow field around the Coanda surface, two-dimensional numerical simulation is also conducted. Five types of Coanda surfaces with different curvature are designed, and the flow behaviour and the performance of them are analyzed and compared with those of the prototype. The analysis indicates that the curvature of Coanda surface is strongly related to blowing performance, It is found that there is an optimal curvature of Coanda surfaces among the studied models. Simulation result shows that there is a special low pressure region. With increasing curvature in Y direction, several low pressure regions gradually enlarged, then begin to merge slowly, and finally form a large area of low pressure. From the analyses of streamlines and velocity angle, it is found that the magnitude of the curvature affects the flow direction and reasonable curvature can induce fluid flow close to the wall. Thus, it leads to that the curvature of the streamlines is consistent with that of Coanda surface. Meanwhile, it also causes the fluid movement towards the most suitable direction. This study will provide useful information to performance improvements of bladeless fans.
Curvature of the localized surface plasmon resonance peak.
Chen, Peng; Liedberg, Bo
2014-08-05
Localized surface plasmon resonance (LSPR) occurring in noble metal nanoparticles (e.g., Au) is a widely used phenomenon to report molecular interactions. Traditional LSPR sensors typically monitor shifts in the peak position or extinction in response to local refractive index changes in the close vicinity of the nanoparticle surface. The ability to resolve minute shifts/extinction changes is to a large extent limited by instrumental noise. A new strategy to evaluate LSPR responses utilizing changes in the shape of the extinction spectrum (the curvature) is proposed. The response of curvature to refractive index changes is investigated theoretically using Mie theory and an analytical expression relating the curvature to the refractive index is presented. The experimentally derived curvatures for 13 nm spherical gold nanoparticles (AuNPs) exposed to solvents with different bulk refractive indices confirm the theoretical predictions. Moreover, both the calculated and experimental findings suggest that the curvature is approximately a linear function of refractive index in regimes relevant to bio and chemical sensing. We demonstrate that curvature is superior over peak shift and extinction both in terms of signal-to-noise (S/N) ratio and reliability of LSPR sensors. With a curvature, one could readily monitor submonolayer adsorption of a low molecular weight thiol molecule (M(w) = 458.6) onto 13 nm AuNPs. It is also worthwhile mentioning that curvature is virtually insensitive to instrumental instabilities and artifacts occurring during measurement. Instabilities such as baseline tilt and shift, shift in peak position as well as sharp spikes/steps in the extinction spectra do not induce artifacts in the sensorgrams of curvature.
3D curvature of muscle fascicles in triceps surae.
Rana, Manku; Hamarneh, Ghassan; Wakeling, James M
2014-12-01
Muscle fascicles curve along their length, with the curvatures occurring around regions of high intramuscular pressure, and are necessary for mechanical stability. Fascicles are typically considered to lie in fascicle planes that are the planes visualized during dissection or two-dimensional (2D) ultrasound scans. However, it has previously been predicted that fascicles must curve in three-dimensional (3D) and thus the fascicle planes may actually exist as 3D sheets. 3D fascicle curvatures have not been explored in human musculature. Furthermore, if the fascicles do not lie in 2D planes, then this has implications for architectural measures that are derived from 2D ultrasound scans. The purpose of this study was to quantify the 3D curvatures of the muscle fascicles and fascicle sheets within the triceps surae muscles and to test whether these curvatures varied among different contraction levels, muscle length, and regions within the muscle. Six male subjects were tested for three torque levels (0, 30, and 60% maximal voluntary contraction) and four ankle angles (-15, 0, 15, and 30° plantar flexion), and fascicles were imaged using 3D ultrasound techniques. The fascicle curvatures significantly increased at higher ankle torques and shorter muscle lengths. The fascicle sheet curvatures were of similar magnitude to the fascicle curvatures but did not vary between contractions. Fascicle curvatures were regionalized within each muscle with the curvature facing the deeper aponeuroses, and this indicates a greater intramuscular pressure in the deeper layers of muscles. Muscle architectural measures may be in error when using 2D images for complex geometries such as the soleus.
Measurement of the gravity-field curvature by atom interferometry.
Rosi, G; Cacciapuoti, L; Sorrentino, F; Menchetti, M; Prevedelli, M; Tino, G M
2015-01-09
We present the first direct measurement of the gravity-field curvature based on three conjugated atom interferometers. Three atomic clouds launched in the vertical direction are simultaneously interrogated by the same atom interferometry sequence and used to probe the gravity field at three equally spaced positions. The vertical component of the gravity-field curvature generated by nearby source masses is measured from the difference between adjacent gravity gradient values. Curvature measurements are of interest in geodesy studies and for the validation of gravitational models of the surrounding environment. The possibility of using such a scheme for a new determination of the Newtonian constant of gravity is also discussed.
Holomorphic bisectional curvatures, supersymmetry breaking, and Affleck-Dine baryogenesis
NASA Astrophysics Data System (ADS)
Dutta, Bhaskar; Sinha, Kuver
2012-11-01
Working in D=4, N=1 supergravity, we utilize relations between holomorphic sectional and bisectional curvatures of Kahler manifolds to constrain Affleck-Dine baryogenesis. We show the following no-go result: Affleck-Dine baryogenesis cannot be performed if the holomorphic sectional curvature at the origin is isotropic in tangent space; as a special case, this rules out spaces of constant holomorphic sectional curvature (defined in the above sense) and in particular maximally symmetric coset spaces. We also investigate scenarios where inflationary supersymmetry breaking is identified with the supersymmetry breaking responsible for mass splitting in the visible sector, using conditions of sequestering to constrain manifolds where inflation can be performed.
Dynamic Curvature Steering Control for Autonomous Vehicle: Performance Analysis
NASA Astrophysics Data System (ADS)
Aizzat Zakaria, Muhammad; Zamzuri, Hairi; Amri Mazlan, Saiful
2016-02-01
This paper discusses the design of dynamic curvature steering control for autonomous vehicle. The lateral control and longitudinal control are discussed in this paper. The controller is designed based on the dynamic curvature calculation to estimate the path condition and modify the vehicle speed and steering wheel angle accordingly. In this paper, the simulation results are presented to show the capability of the controller to track the reference path. The controller is able to predict the path and modify the vehicle speed to suit the path condition. The effectiveness of the controller is shown in this paper whereby identical performance is achieved with the benchmark but with extra curvature adaptation capabilites.
Motion on constant curvature spaces and quantization using Noether symmetries.
Bracken, Paul
2014-12-01
A general approach is presented for quantizing a metric nonlinear system on a manifold of constant curvature. It makes use of a curvature dependent procedure which relies on determining Noether symmetries from the metric. The curvature of the space functions as a constant parameter. For a specific metric which defines the manifold, Lie differentiation of the metric gives these symmetries. A metric is used such that the resulting Schrödinger equation can be solved in terms of hypergeometric functions. This permits the investigation of both the energy spectrum and wave functions exactly for this system.
LPG-based sensor for curvature and vibration
NASA Astrophysics Data System (ADS)
Nascimento, I. M.; Chesini, G.; Baptista, J. M.; Cordeiro, Cristiano M. B.; Jorge, P. A. S.
2016-05-01
A long-period grating (LPG) written on a standard single mode fiber is investigated as a curvature and vibration sensor. It is demonstrated a high sensitivity to applied curvature and the possibility to monitor vibration in a wide range of frequencies from 30 Hz to 2000 Hz. The system was tested using an intensity based interrogation scheme with the LPG sensor operating in the curvature regime. Results have shown a reproducible frequency discrimination in the 30 Hz to 2000 Hz, with resolutions between 11 mHz and 913 mHz. Frequency retrieval could be performed independent of temperature up to 86 °C.
Inconsistency of scale-invariant curvature coupled to gravity
Zoller, D. )
1990-10-29
We show that the scale-invariant curvature action for paths, the point-particle version of Polyakov's extrinsic-curvature action for surfaces, does not couple consistently to gravity. The curvature action for paths yields a massless representation of the Poincare group with fixed helicity and so potentially provides a description of single photons and gravitons. We present a physical interpretation of the inconsistency in terms of the nonlocalizability of the photon and point out a conceptual kinship with the local supersymmetry of a spinning particle.
Inconsistency of scale-invariant curvature coupled to gravity
NASA Astrophysics Data System (ADS)
Zoller, D.
1990-10-01
We show that the scale-invariant curvature action for paths, the point-particle version of Polyakov's extrinsic-curvature action for surfaces, does not couple consistently to gravity. The curvature action for paths yields a massless representation of the Poincaré group with fixed helicity and so potentially provides a description of single photons and gravitons. We present a physical interpretation of the inconsistency in terms of the nonlocalizability of the photon and point out a conceptual kinship with the local supersymmetry of a spinning particle.
Characterizing the curvature and its first derivative for imperfect fluids
NASA Astrophysics Data System (ADS)
Machado Ramos, Maria da Piedade
2017-04-01
The curvature tensor and its derivatives up to any order can be covariantly characterized by a minimal set of spinor quantities. On the other hand it might be useful, particularly in cosmology, to describe the geometry of a spacetime in a (1+3) formalism, based on an invariantly defined fluid velocity. In this work, we consider an imperfect fluid possessing both isotropic and anisotropic pressure. For these fluids, we determine the (1+3) matter terms of the curvature as well as the parts of the first order covariant derivative of the curvature (\
Enhancing magnetoelectric effect via the curvature of composite cylinder
NASA Astrophysics Data System (ADS)
Wang, H. M.; Pan, E.; Chen, W. Q.
2010-05-01
We solved analytically the magnetoelectric (ME) effect in a bilayered piezoelectric/piezomagnetic cylinder under harmonic excitation. We revealed that at a fixed thickness ratio of the layers, the static or low-frequency ME effect can be substantially enhanced by increasing the curvature of the cylinder. In the megahertz frequency domain, on the other hand, we observed that the peak ME effect can be considerably increased by decreasing the curvature. We further showed that at a fixed curvature, the ME effect can be tuned to be around the resonant frequency for giant output by varying the boundary condition and thickness ratio.
Einstein Gravity and Beyond: Aspects of Higher-Curvature Gravity and Black Holes
NASA Astrophysics Data System (ADS)
Chatterjee, Saugata
This thesis explores the different aspects of higher curvature gravity. The "membrane paradigm" of black holes in Einstein gravity is extended to black holes in f(R) gravity and it is shown that the higher curvature effects of f( R) gravity causes the membrane fluid to become non-Newtonian. Next a modification of the null energy condition in gravity is provided. The purpose of the null energy condition is to filter out ill-behaved theories containing ghosts. Conformal transformations, which are simple redefinitions of the spacetime, introduces serious violations of the null energy condition. This violation is shown to be spurious and a prescription for obtaining a modified null energy condition, based on the universality of the second law of thermodynamics, is provided. The thermodynamic properties of the black holes are further explored using merger of extremal black holes whose horizon entropy has topological contributions coming from the higher curvature Gauss-Bonnet term. The analysis refutes the prevalent belief in the literature that the second law of black hole thermodynamics is violated in the presence of the Gauss-Bonnet term in four dimensions. Subsequently a specific class of higher derivative scalar field theories called the galileons are obtained from a Kaluza-Klein reduction of Gauss-Bonnet gravity. Galileons are null energy condition violating theories which lead to violations of the second law of thermodynamics of black holes. These higher derivative scalar field theories which are non-minimally coupled to gravity required the development of a generalized method for obtaining the equations of motion. Utilizing this generalized method, it is shown that the inclusion of the Gauss-Bonnet term made the theory of gravity to become higher derivative, which makes it difficult to make any statements about the connection between the violation of the second law of thermodynamics and the galileon fields.
Curvature-driven assembly in soft matter.
Liu, Iris B; Sharifi-Mood, Nima; Stebe, Kathleen J
2016-07-28
Control over the spatial arrangement of colloids in soft matter hosts implies control over a wide variety of properties, ranging from the system's rheology, optics, and catalytic activity. In directed assembly, colloids are typically manipulated using external fields to form well-defined structures at given locations. We have been developing alternative strategies based on fields that arise when a colloid is placed within soft matter to form an inclusion that generates a potential field. Such potential fields allow particles to interact with each other. If the soft matter host is deformed in some way, the potential allows the particles to interact with the global system distortion. One important example is capillary assembly of colloids on curved fluid interfaces. Upon attaching, the particle distorts that interface, with an associated energy field, given by the product of its interfacial area and the surface tension. The particle's capillary energy depends on the local interface curvature. We explore this coupling in experiment and theory. There are important analogies in liquid crystals. Colloids in liquid crystals elicit an elastic energy response. When director fields are moulded by confinement, the imposed elastic energy field can couple to that of the colloid to define particle paths and sites for assembly. By improving our understanding of these and related systems, we seek to develop new, parallelizable routes for particle assembly to form reconfigurable systems in soft matter that go far beyond the usual close-packed colloidal structures.This article is part of the themed issue 'Soft interfacial materials: from fundamentals to formulation'.
NASA Astrophysics Data System (ADS)
Ma, Shuang; Yi, Shengzhen; Chen, Shenghao; Wang, Zhanshan
2014-11-01
Monochromatic energy multilayer Kirkpatrick-Baez microscope is one of key diagnostic tools for researches on inertial confinement fusion. It is composed by two orthogonal concave spherical mirrors with small curvature and aperture, and produce the image of an object by collecting X-rays in each orthogonal direction, independently. Accurate measurement of radius of curvature of concave spherical mirrors is very important to achieve its design optical properties including imaging quality, optical throughput and energy resolution. However, it is difficult to measure the radius of curvature of spherical optical surfaces with small curvature and aperture by conventional methods, for the produced reflective intensity of glass is too low to correctly test. In this paper, we propose an improved measuring method of optical profiler to accomplish accurate measurement of radius of curvature of spherical optical surfaces with small curvature and aperture used in the monochromatic energy multilayer Kirkpatrick-Baez microscope. Firstly, we use a standard super-smooth optical flat to calibrate reference mirror before each experiment. Following, deviation of central position between measurement area and interference pattern is corrected by the theory of Newton's rings, and the zero-order fringe position is derived from the principle of interference in which surface roughness has minimum values in the position of zero light path difference. Measured results by optical profiler show the low relative errors and high repeatability. Eventually, an imaging experiment of monochromatic energy multilayer Kirkpatrick-Baez microscope determines the measurement accuracy of radius of curvature.
Interaction of peptides with cell membranes: insights from molecular modeling
NASA Astrophysics Data System (ADS)
Li, Zhen-lu; Ding, Hong-ming; Ma, Yu-qiang
2016-03-01
The investigation of the interaction of peptides with cell membranes is the focus of active research. It can enhance the understanding of basic membrane functions such as membrane transport, fusion, and signaling processes, and it may shed light on potential applications of peptides in biomedicine. In this review, we will present current advances in computational studies on the interaction of different types of peptides with the cell membrane. Depending on the properties of the peptide, membrane, and external environment, the peptide-membrane interaction shows a variety of different forms. Here, on the basis of recent computational progress, we will discuss how different peptides could initiate membrane pores, translocate across the membrane, induce membrane endocytosis, produce membrane curvature, form fibrils on the membrane surface, as well as interact with functional membrane proteins. Finally, we will present a conclusion summarizing recent progress and providing some specific insights into future developments in this field.
Stability of the cylindrical shell of variable curvature
NASA Technical Reports Server (NTRS)
Marguerre, Karl
1951-01-01
This report is a first attempt to devise a calculation method for representing the buckling behavior of cylindrical shells of variable curvature. The problem occurs, for instance, in dimensioning wing noses, the stability of which is decisively influenced by the variability of curvature. The calculation is made possible by simplifying the stability equations (permissible for the shell of small curvature) and by assuming that the curvature 1/R as a function of the arc lengths can be represented by a very few Fourier terms. The formulas for the special case of an ellipse-like half oval with an axis ratio 1/3 ?= e ?= 1 under compression in longitudinal direction,shear, and a combination of shear and compression were evaluated. However, the results can also be applied approximately to an unsymmetrical oval-shell segment under compression, shear, and bending so that the numerical values contained in the diagrams 10 to 12 represent directly dimensioning data for the wing nose.
Curvature Control of Silicon Microlens for THz Dielectric Antenna
NASA Technical Reports Server (NTRS)
Lee, Choonsup; Chattopadhyay, Goutam; Cooper, Ken; Mehdi, Imran
2012-01-01
We have controlled the curvature of silicon microlens by changing the amount of photoresist in order to microfabricate hemispherical silicon microlens which can improve the directivity and reduce substrate mode losses.
Spacetime curvature and the Higgs stability during inflation.
Herranen, M; Markkanen, T; Nurmi, S; Rajantie, A
2014-11-21
It has been claimed that the electroweak vacuum may be unstable during inflation due to large fluctuations of the order H in the case of a high inflationary scale as suggested by BICEP2. We compute the standard model Higgs effective potential including UV-induced curvature corrections at one-loop level. We find that for a high inflationary scale a large curvature mass is generated due to renormalization group running of nonminimal coupling ξ, which either stabilizes the potential against fluctuations for ξEW≳6×10(-2), or destabilizes it for ξEW≲2×10(-2) when the generated curvature mass is negative. Only in the narrow intermediate region may the effect of the curvature mass be significantly smaller.
Changes on the corneal thickness and curvature after orthokeratology
NASA Astrophysics Data System (ADS)
Mitsui, Iwane; Yamada, Yoshiya
2004-07-01
To evaluate the corneal thickness and curvature changes after Orthokeratology contact lens wear, using the ORBSCAN II corneal topography system, corneal thickness and corneal curvature were measured on one hundred and twenty eyes of sixty patients before and after wearing the custom rigid gas permeable contact lenses for Orthokeratology. The contact lenses were specially designed for each eye. The subjects wore the orthokeratology lenses for approximately Four hours with their eyes closed. The corneal thickness of the subjects was increased on fifty-five eyes at not only the peripheral zone but also the center of the cornea. The average increase of central and peripheral corneal thickness was 18 micrometer and 22micrometer, respectively. The mean anterior curvature of corneal surface changed 1.25D. The mean posterior curvature of corneal endothelium side changed 0.75D.
16. Detail of curvature of northern parapet, with 1932 concrete ...
16. Detail of curvature of northern parapet, with 1932 concrete extension of parapet in foreground, facing east. - Dubbs Bridge, Spinnerstown Road (State Route 2031) spanning Hosensack Creek, Dillingerville, Lehigh County, PA
Curvature-Squared Cosmology In The First-Order Formalism
NASA Technical Reports Server (NTRS)
Shahid-Saless, Bahman
1993-01-01
Paper presents theoretical study of some of general-relativistic ramifications of gravitational-field energy density proportional to R - alpha R(exp 2) (where R is local scalar curvature of space-time and alpha is a constant).
Uniform background curvature: Foam families and frustrated discs
NASA Astrophysics Data System (ADS)
Modes, Carl Douglas
The introduction of background curvature to systems in soft condensed matter, and across all of physics, has a long standing history of success. Particularly in cases where the role of curvature is a surprise, a great deal of new insight may be derived from this technique. This thesis carries on in that tradition, applying uniform background curvature to study varied systems. The glass transition of amorphous materials, and the hard sphere interactions that underlie it, is modeled with hard discs in a space of constant negative curvature. We examine random packing on negatively curved, triply periodic surfaces. Continuous families of Plateau's Laws-commensurate foam bubbles are generated by conformal projection of regular foams in positively-curved space.
Three dimensional computer vision: Potential applications with curvature tracking
Sanford, Adam
1996-05-01
The purpose of this project is to develop a method of tracking data points for computer vision systems using curvature analysis. This is of particular importance to fellow researchers at the Lab, who have developed a markerless video computer vision system and are in need of such a method to track data points. A three dimensional viewing program was created to analyze the geometry of surface patches. Virtual surfaces were plotted and processed by the program to determine the Mean and Gaussian Curvature parameters for each point on the surface, thus defining each point`s surface geometry type. The same computer processes are then applied to each frame of data acquired by the computer vision system to find surface {open_quotes}landmarks{close_quotes} that hold constant curvature during motion. Preliminary results indicate that curvature analysis shows great promise and could solve the tracking dilemma faced by those in the field of markerless imaging systems.
Correlation between thoracolumbar curvatures and respiratory function in older adults.
Rahman, Nor Najwatul Akmal Ab; Singh, Devinder Kaur Ajit; Lee, Raymond
2017-01-01
Aging is associated with alterations in thoracolumbar curvatures and respiratory function. Research information regarding the correlation between thoracolumbar curvatures and a comprehensive examination of respiratory function parameters in older adults is limited. The aim of the present study was to examine the correlation between thoracolumbar curvatures and respiratory function in community-dwelling older adults. Thoracolumbar curvatures (thoracic and lumbar) were measured using a motion tracker. Respiratory function parameters such as lung function, respiratory rate, respiratory muscle strength and respiratory muscle thickness (diaphragm and intercostal) were measured using a spirometer, triaxial accelerometer, respiratory pressure meter and ultrasound imaging, respectively. Sixty-eight community-dwelling older males and females from Kuala Lumpur, Malaysia, with mean (standard deviation) age of 66.63 (5.16) years participated in this cross-sectional study. The results showed that mean (standard deviation) thoracic curvature angle and lumbar curvature angles were -46.30° (14.66°) and 14.10° (10.58°), respectively. There was a significant negative correlation between thoracic curvature angle and lung function (forced expiratory volume in 1 second: r=-0.23, P<0.05; forced vital capacity: r=-0.32, P<0.05), quiet expiration intercostal thickness (r=-0.22, P<0.05) and deep expiration diaphragm muscle thickness (r=-0.21, P<0.05). The lumbar curvature angle had a significant negative correlation with respiratory muscle strength (r=-0.29, P<0.05) and diaphragm muscle thickness at deep inspiration (r=-0.22, P<0.05). However, respiratory rate was correlated neither with thoracic nor with lumbar curvatures. The findings of this study suggest that increase in both thoracic and lumbar curvatures is correlated with decrease in respiratory muscle strength, respiratory muscle thickness and some parameters of lung function. Clinically, both thoracic and lumbar curvatures
Correlation between thoracolumbar curvatures and respiratory function in older adults
Rahman, Nor Najwatul Akmal Ab; Singh, Devinder Kaur Ajit; Lee, Raymond
2017-01-01
Aging is associated with alterations in thoracolumbar curvatures and respiratory function. Research information regarding the correlation between thoracolumbar curvatures and a comprehensive examination of respiratory function parameters in older adults is limited. The aim of the present study was to examine the correlation between thoracolumbar curvatures and respiratory function in community-dwelling older adults. Thoracolumbar curvatures (thoracic and lumbar) were measured using a motion tracker. Respiratory function parameters such as lung function, respiratory rate, respiratory muscle strength and respiratory muscle thickness (diaphragm and intercostal) were measured using a spirometer, triaxial accelerometer, respiratory pressure meter and ultrasound imaging, respectively. Sixty-eight community-dwelling older males and females from Kuala Lumpur, Malaysia, with mean (standard deviation) age of 66.63 (5.16) years participated in this cross-sectional study. The results showed that mean (standard deviation) thoracic curvature angle and lumbar curvature angles were −46.30° (14.66°) and 14.10° (10.58°), respectively. There was a significant negative correlation between thoracic curvature angle and lung function (forced expiratory volume in 1 second: r=−0.23, P<0.05; forced vital capacity: r=−0.32, P<0.05), quiet expiration intercostal thickness (r=−0.22, P<0.05) and deep expiration diaphragm muscle thickness (r=−0.21, P<0.05). The lumbar curvature angle had a significant negative correlation with respiratory muscle strength (r=−0.29, P<0.05) and diaphragm muscle thickness at deep inspiration (r=−0.22, P<0.05). However, respiratory rate was correlated neither with thoracic nor with lumbar curvatures. The findings of this study suggest that increase in both thoracic and lumbar curvatures is correlated with decrease in respiratory muscle strength, respiratory muscle thickness and some parameters of lung function. Clinically, both thoracic and lumbar
Curvature-driven acceleration: a utopia or a reality?
NASA Astrophysics Data System (ADS)
Das, Sudipta; Banerjee, Narayan; Dadhich, Naresh
2006-06-01
The present work shows that a combination of nonlinear contributions from the Ricci curvature in Einstein field equations can drive a late time acceleration of expansion of the universe. The transit from the decelerated to the accelerated phase of expansion takes place smoothly without having to resort to a study of asymptotic behaviour. This result emphasizes the need for thorough and critical examination of models with nonlinear contribution from the curvature.
Hedgehogs in higher dimensional gravity with curvature self-interactions
NASA Astrophysics Data System (ADS)
Giovannini, Massimo
2001-04-01
Static solutions of the higher dimensional Einstein-Hilbert gravity supplemented by quadratic curvature self-interactions are discussed in the presence of hedgehog configurations along the transverse dimensions. The quadratic part of the action is parametrized in terms of the (ghost-free) Euler-Gauss-Bonnet curvature invariant. Spherically symmetric profiles of the transverse metric admit exponentially decaying warp factors both for positive and negative bulk cosmological constants.
A novel curvature-controllable steerable needle for percutaneous intervention.
Bui, Van Khuyen; Park, Sukho; Park, Jong-Oh; Ko, Seong Young
2016-08-01
Over the last few decades, flexible steerable robotic needles for percutaneous intervention have been the subject of significant interest. However, there still remain issues related to (a) steering the needle's direction with less damage to surrounding tissues and (b) increasing the needle's maximum curvature for better controllability. One widely used approach is to control the fixed-angled bevel-tip needle using a "duty-cycle" algorithm. While this algorithm has shown its applicability, it can potentially damage surrounding tissue, which has prevented the widespread adoption of this technology. This situation has motivated the development of a new steerable flexible needle that can change its curvature without axial rotation, while at the same time producing a larger curvature. In this article, we propose a novel curvature-controllable steerable needle. The proposed robotic needle consists of two parts: a cannula and a stylet with a bevel-tip. The curvature of the needle's path is controlled by a control offset, defined by the offset between the bevel-tip and the cannula. As a result, the necessity of rotating the whole needle's body is decreased. The duty-cycle algorithm is utilized to a limited degree to obtain a larger radius of curvature, which is similar to a straight path. The first prototype of 0.46 mm (outer diameter) was fabricated and tested with both in vitro gelatin phantom and ex vivo cow liver tissue. The maximum curvatures measured 0.008 mm(-1) in 6 wt% gelatin phantom, 0.0139 mm(-1) in 10 wt% gelatin phantom, and 0.0038 mm(-1) in cow liver. The experimental results show a linear relationship between the curvature and the control offset, which can be utilized for future implementation of this control algorithm.
Fresnel diffractive imaging: Experimental study of coherence and curvature
Whitehead, L. W.; Williams, G. J.; Quiney, H. M.; Nugent, K. A.; Peele, A. G.; Paterson, D.; Jonge, M. D. de; McNulty, I.
2008-03-01
A Fresnel coherent diffractive imaging experiment is performed using a pinhole as a test object. The experimental parameters of the beam curvature and coherence length of the illuminating radiation are varied to investigate their effects on the reconstruction process. It is found that a sufficient amount of curvature across the sample strongly ameliorates the effects of low coherence, even when the sample size exceeds the coherence length.
Masel, Richard I.; Chen, Qingmei; Liu, Zengcai; Kutz, Robert
2017-02-28
An ion conducting polymeric composition mixture comprises a copolymer of styrene and vinylbenzyl-R.sub.s. R.sub.s is selected from the group consisting of imidazoliums, pyridiniums, pyrazoliums, pyrrolidiniums, pyrroliums, pyrimidiums, piperidiniums, indoliums, and triaziniums. The composition contains 10%-90% by weight of vinylbenzyl-R.sub.s. The composition can further comprise a polyolefin comprising substituted polyolefins, a polymer comprising cyclic amine groups, a polymer comprising at least one of a phenylene group and a phenyl group, a polyamide, and/or the reaction product of a constituent having two carbon-carbon double bonds. The composition can be in the form of a membrane. In a preferred embodiment, the membrane is a Helper Membrane that increases the faradaic efficiency of an electrochemical cell into which the membrane is incorporated, and also allows product formation at lower voltages than in cells without the Helper Membrane.
Masel, Richard L.; Chen, Qingmei; Liu, Zengcai; Kutz, Robert
2016-06-21
An ion conducting polymeric composition mixture comprises a copolymer of styrene and vinylbenzyl-R.sub.s. R.sub.s is selected from the group consisting of imidazoliums and pyridiniums. The composition contains 10%-90% by weight of vinylbenzyl-R.sub.s. The composition can further comprise a polyolefin comprising substituted polyolefins, a polymer comprising cyclic amine groups, a polymer comprising at least one of a phenylene group and a phenyl group, a polyamide, and/or the reaction product of a constituent having two carbon-carbon double bonds. The composition can be in the form of a membrane. In a preferred embodiment, the membrane is a Helper Membrane that increases the faradaic efficiency of an electrochemical cell into which the membrane is incorporated, and also allows product formation at lower voltages than in cells without the Helper Membrane.
The effect of illuminant position on perceived curvature.
Curran, W; Johnston, A
1996-05-01
In shaded scenes surface features can appear either concave or convex, depending upon the viewer's judgement about the direction of the prevailing illumination. If other curvature cues are added to the image this ambiguity can be removed. However, it is not clear to what extent, if any, illuminant position exerts an influence on the perceived magnitude of surface curvature. Subjects were presented with pairs of spherical surface patches in a curvature matching task. The patches were defined by shading and texture cues. The perceived curvature of a standard patch was measured as a function of light source position. We found a clear effect of light source position on apparent curvature. Perceived curvature decreased as light source tilt increased and as light source slant decreased. We also found that the strength of this effect is determined partly by a surface's reflectance function and partly by the relative weight of the texture cue. When a specular component was added to the stimuli, the effect of light source orientation was weakened. The weight of the texture cue was manipulated by disrupting the regular distribution of texture elements. We found an inverse relationship between the strength of the effect and the weight of the texture cue: lowering the texture cue weight resulted in an enhancement of the illuminant position effect.
Curvature reduces bending strains in the quokka femur
McCabe, Kyle; Henderson, Keith; Pantinople, Jess; Milne, Nick
2017-01-01
This study explores how curvature in the quokka femur may help to reduce bending strain during locomotion. The quokka is a small wallaby, but the curvature of the femur and the muscles active during stance phase are similar to most quadrupedal mammals. Our hypothesis is that the action of hip extensor and ankle plantarflexor muscles during stance phase place cranial bending strains that act to reduce the caudal curvature of the femur. Knee extensors and biarticular muscles that span the femur longitudinally create caudal bending strains in the caudally curved (concave caudal side) bone. These opposing strains can balance each other and result in less strain on the bone. We test this idea by comparing the performance of a normally curved finite element model of the quokka femur to a digitally straightened version of the same bone. The normally curved model is indeed less strained than the straightened version. To further examine the relationship between curvature and the strains in the femoral models, we also tested an extra-curved and a reverse-curved version with the same loads. There appears to be a linear relationship between the curvature and the strains experienced by the models. These results demonstrate that longitudinal curvature in bones may be a manipulable mechanism whereby bone can induce a strain gradient to oppose strains induced by habitual loading. PMID:28348929
Trans-Membrane Area Asymmetry Controls the Shape of Cellular Organelles
Beznoussenko, Galina V.; Pilyugin, Sergei S.; Geerts, Willie J. C.; Kozlov, Michael M.; Burger, Koert N. J.; Luini, Alberto; Derganc, Jure; Mironov, Alexander A.
2015-01-01
Membrane organelles often have complicated shapes and differ in their volume, surface area and membrane curvature. The ratio between the surface area of the cytosolic and luminal leaflets (trans-membrane area asymmetry (TAA)) determines the membrane curvature within different sites of the organelle. Thus, the shape of the organelle could be critically dependent on TAA. Here, using mathematical modeling and stereological measurements of TAA during fast transformation of organelle shapes, we present evidence that suggests that when organelle volume and surface area are constant, TAA can regulate transformation of the shape of the Golgi apparatus, endosomal multivesicular bodies, and microvilli of brush borders of kidney epithelial cells. Extraction of membrane curvature by small spheres, such as COPI-dependent vesicles within the Golgi (extraction of positive curvature), or by intraluminal vesicles within endosomes (extraction of negative curvature) controls the shape of these organelles. For instance, Golgi tubulation is critically dependent on the fusion of COPI vesicles with Golgi cisternae, and vice versa, for the extraction of membrane curvature into 50–60 nm vesicles, to induce transformation of Golgi tubules into cisternae. Also, formation of intraluminal ultra-small vesicles after fusion of endosomes allows equilibration of their TAA, volume and surface area. Finally, when microvilli of the brush border are broken into vesicles and microvilli fragments, TAA of these membranes remains the same as TAA of the microvilli. Thus, TAA has a significant role in transformation of organelle shape when other factors remain constant. PMID:25761238
Order, topology and preference
NASA Technical Reports Server (NTRS)
Sertel, M. R.
1971-01-01
Some standard order-related and topological notions, facts, and methods are brought to bear on central topics in the theory of preference and the theory of optimization. Consequences of connectivity are considered, especially from the viewpoint of normally preordered spaces. Examples are given showing how the theory of preference, or utility theory, can be applied to social analysis.
Madsen, Kenneth Lindegaard; Herlo, Rasmus
2017-01-01
The shape and composition of a membrane directly regulate the localization, activity, and signaling properties of membrane associated proteins. Proteins that both sense and generate membrane curvature, e.g., through amphiphilic insertion motifs, potentially engage in recursive binding dynamics, where the recruitment of the protein itself changes the properties of the membrane substrate. Simple geometric models of membrane curvature interactions already provide prediction tools for experimental observations, however these models are treating curvature sensing and generation as separated phenomena. Here, we outline a model that applies both geometric and basic thermodynamic considerations. This model allows us to predict the consequences of recursive properties in such interaction schemes and thereby integrate the membrane as a dynamic substrate. We use this combined model to hypothesize the origin and properties of tubular carrier systems observed in cells. Furthermore, we pinpoint the coupling to a membrane reservoir as a factor that influences the membrane curvature sensing and generation properties of local curvatures in the cell in line with classic determinants such as lipid composition and membrane geometry. PMID:28208740
Dynamic sorting of lipids and proteins in membrane tubes with a moving phase boundary
Heinrich, Michael; Tian, Aiwei; Esposito, Cinzia; Baumgart, Tobias
2010-01-01
Cellular organelle membranes maintain their integrity, global shape, and composition despite vigorous exchange among compartments of lipids and proteins during trafficking and signaling. Organelle homeostasis involves dynamic molecular sorting mechanisms that are far from being understood. In contrast, equilibrium thermodynamics of membrane mixing and sorting, particularly the phase behavior of binary and ternary model membrane mixtures and its coupling to membrane mechanics, is relatively well characterized. Elucidating the continuous turnover of live cell membranes, however, calls for experimental and theoretical membrane models enabling manipulation and investigation of directional mass transport. Here we introduce the phenomenon of curvature-induced domain nucleation and growth in membrane mixtures with fluid phase coexistence. Membrane domains were consistently observed to nucleate precisely at the junction between a strongly curved cylindrical (tube) membrane and a pipette-aspirated giant unilamellar vesicle. This experimental geometry mimics intracellular sorting compartments, because they often show tubular-vesicular membrane regions. Nucleated domains at tube necks were observed to present diffusion barriers to the transport of lipids and proteins. We find that curvature-nucleated domains grow with characteristic parabolic time dependence that is strongly curvature-dependent. We derive an analytical model that reflects the observed growth dynamics. Numerically calculated membrane shapes furthermore allow us to elucidate mechanical details underlying curvature-dependent directed lipid transport. Our observations suggest a novel dynamic membrane sorting principle that may contribute to intracellular protein and lipid sorting and trafficking. PMID:20368457
The curvature of material surfaces in isotropic turbulence
NASA Astrophysics Data System (ADS)
Pope, S. B.; Yeung, P. K.; Girimaji, S. S.
1989-12-01
Direct numerical simulation is used to study the curvature of material surfaces in isotropic turbulence. The Navier-Stokes equation is solved by a 643 pseudospectral code for constant-density homogeneous isotropic turbulence, which is made statistically stationary by low-wavenumber forcing. The Taylor-scale Reynolds number is 39. An ensemble of 8192 infinitesimal material surface elements is tracked through the turbulence. For each element, a set of exact ordinary differential equations is integrated in time to determine, primarily, the two principal curvatures k1 and k2. Statistics are then deduced of the mean-square curvature M= (1)/(2) (k21+k22), and of the mean radius of curvature R=(k21+k22)-1/2. Curvature statistics attain an essentially stationary state after about 15 Kolmogorov time scales. Then the area-weighted expectation of R is found to be 12η, where η is the Kolmogorov length scale. For moderate and small radii (less than 10η) the probability density function (pdf) of R is approximately uniform, there being about 5% probability of R being less than η. The uniformity of the pdf of R, for small R, implies that the expectation of M is infinite. It is found that the surface elements with large curvatures are nearly cylindrical in shape (i.e., ‖k1‖≫‖k2‖ or ‖k2‖≫‖k1‖), consistent with the folding of the surface along nearly straight lines. Nevertheless the variance of the Gauss curvature K=k1k2 is infinite.
Turning maneuvers in sharks: Predicting body curvature from axial morphology.
Porter, Marianne E; Roque, Cassandra M; Long, John H
2009-08-01
Given the diversity of vertebral morphologies among fishes, it is tempting to propose causal links between axial morphology and body curvature. We propose that shape and size of the vertebrae, intervertebral joints, and the body will more accurately predict differences in body curvature during swimming rather than a single meristic such as total vertebral number alone. We examined the correlation between morphological features and maximum body curvature seen during routine turns in five species of shark: Triakis semifasciata, Heterodontus francisci, Chiloscyllium plagiosum, Chiloscyllium punctatum, and Hemiscyllium ocellatum. We quantified overall body curvature using three different metrics. From a separate group of size-matched individuals, we measured 16 morphological features from precaudal vertebrae and the body. As predicted, a larger pool of morphological features yielded a more robust prediction of maximal body curvature than vertebral number alone. Stepwise linear regression showed that up to 11 features were significant predictors of the three measures of body curvature, yielding highly significant multiple regressions with r(2) values of 0.523, 0.537, and 0.584. The second moment of area of the centrum was always the best predictor, followed by either centrum length or transverse height. Ranking as the fifth most important variable in three different models, the body's total length, fineness ratio, and width were the most important non-vertebral morphologies. Without considering the effects of muscle activity, these correlations suggest a dominant role for the vertebral column in providing the passive mechanical properties of the body that control, in part, body curvature during swimming.
A novel approach in assessment of root canal curvature
Sadeghi, Shiva; Poryousef, Vahideh
2009-01-01
Introduction: The purpose of this in vitro study was to introduce a new method to describe root canal curvatures and to assess the degree of curvature of human permanent mandibular teeth with curved root canals. Materials and Methods: One hundred and thirty five mesial root canals of mandibular first and second molar teeth were selected. Access cavities were prepared. After inserting a K-file size #10 into each canal, radiographs were taken. Canal curvature was determined by measuring the Schneider angle, canal access angle, as well as the canal radius, length, height and curvature starting distance on scanned radiographs using a computerized image processing system. Data was evaluated statistically using Pearson correlation. Results: The mean canal access angle (CAA) and Schneider angle (S) were 8.04◦ (3.46) and 19◦ (6.99), respectively. The Pearson correlation analysis found significant positive correlation between S and CAA (r=0.826, P<0.0001). Negative correlations were found between radius and length (r= –0.4, P<0.0001), radius and Schneider angle (r= –0.4, P<0.0001), radius and CAA (r= –0.24, P=0.004) and CAA and curvature starting distance (r= 0.4, P<0.0001). There was no correlation between height and distance (r=0.013, P=0.789), as well as CAA and height (r=0.654, P=0.001). Conclusion: Under the limitations of this study, the results indicated that the shape of root canal curvature can be more accurately described using two angles, Schneider in combination with Canal access angle. The related parameters included radius, length, distance and height of curvature. [Iranian Endodontic Journal 2009;4(4):131-4] PMID:24019833
Clinical workflow for spinal curvature measurement with portable ultrasound
NASA Astrophysics Data System (ADS)
Tabanfar, Reza; Yan, Christina; Kempston, Michael; Borschneck, Daniel; Ungi, Tamas; Fichtinger, Gabor
2016-03-01
PURPOSE: Spinal curvature monitoring is essential in making treatment decisions in scoliosis. Monitoring entails radiographic examinations, however repeated ionizing radiation exposure has been shown to increase cancer risk. Ultrasound does not emit ionizing radiation and is safer for spinal curvature monitoring. We investigated a clinical sonography protocol and challenges associated with position-tracked ultrasound in spinal curvature measurement in scoliosis. METHODS: Transverse processes were landmarked along each vertebra using tracked ultrasound snapshots. The transverse process angle was used to determine the orientation of each vertebra. We tested our methodology on five patients in a local pediatric scoliosis clinic, comparing ultrasound to radiographic curvature measurements. RESULTS: Despite strong correlation between radiographic and ultrasound curvature angles in phantom studies, we encountered new challenges in the clinical setting. Our main challenge was differentiating transverse processes from ribs and other structures during landmarking. We observed up to 13° angle variability for a single vertebra and a 9.85° +/- 10.81° difference between ultrasound and radiographic Cobb angles for thoracic curvatures. Additionally, we were unable to visualize anatomical landmarks in the lumbar region where soft tissue depth was 25-35mm. In volunteers with large Cobb angles (greater than 40° thoracic and 60° lumbar), we observed spinal protrusions resulting in incomplete probe-skin contact and partial ultrasound images not suitable for landmarking. CONCLUSION: Spinal curvature measurement using tracked ultrasound is viable on phantom spine models. In the clinic, new challenges were encountered which must be resolved before a universal sonography protocol can be developed.
On the determination of curvature and dynamical dark energy
Virey, J-M; Taxil, P; Talon-Esmieu, D; Ealet, A; Tilquin, A E-mail: talon@cppm.in2p3.fr E-mail: taxil@cpt.univ-mrs.fr
2008-12-15
Constraining simultaneously the dark energy (DE) equation of state and the curvature of the universe is difficult due to strong degeneracies. To circumvent this problem when analyzing data it is usual to assume flatness to constrain the DE or, conversely, to assume that the DE is a cosmological constant to constrain the curvature. In this paper, we quantify the impact of such assumptions with an eye to future large surveys. We simulate future data for type Ia supernovae, the cosmic microwave background and baryon acoustic oscillations for a large range of fiducial cosmologies allowing a small spatial curvature. We take into account a possible time evolution of DE through a parameterized equation of state: w(a) = w{sub 0}+(1-a)w{sub a}. We then fit the simulated data with a wrong assumption on the curvature or on the DE parameters. For a fiducial {Lambda}CDM cosmology, if flatness is incorrectly assumed in the fit and if the true curvature is within the ranges 0.01<{Omega}{sub k}<0.03 and -0.07<{Omega}{sub k}<-0.01, one will be led to conclude erroneously that an evolving DE is present, even with high statistics. On the other hand, models with curvature and dynamical DE can be confused with a flat {Lambda}CDM model when the fit ignores a possible DE evolution. We find that, in the future, with high statistics, such risks of confusion should be limited, but they are still possible, and biases in the cosmological parameters might be important. We conclude by recalling that, in the future, it will be mandatory to perform some complete multi-probe analyses, leaving the DE parameters as well as the curvature as free parameters.
Budding and vesiculation induced by conical membrane inclusions
NASA Astrophysics Data System (ADS)
Auth, Thorsten; Gompper, Gerhard
2009-09-01
Conical inclusions in a lipid bilayer generate an overall spontaneous curvature of the membrane that depends on concentration and geometry of the inclusions. Examples are integral and attached membrane proteins, viruses, and lipid domains. We propose an analytical model to study budding and vesiculation of the lipid bilayer membrane, which is based on the membrane bending energy and the translational entropy of the inclusions. If the inclusions are placed on a membrane with similar curvature radius, their repulsive membrane-mediated interaction is screened. Therefore, for high inclusion density the inclusions aggregate, induce bud formation, and finally vesiculation. Already with the bending energy alone our model allows the prediction of bud radii. However, in case the inclusions induce a single large vesicle to split into two smaller vesicles, bending energy alone predicts that the smaller vesicles have different sizes whereas the translational entropy favors the formation of equal-sized vesicles. Our results agree well with those of recent computer simulations.
Understanding the role of amphipathic helices in N-BAR domain driven membrane remodeling.
Cui, Haosheng; Mim, Carsten; Vázquez, Francisco X; Lyman, Edward; Unger, Vinzenz M; Voth, Gregory A
2013-01-22
Endophilin N-BAR (N-terminal helix and Bin/amphiphysin/Rvs) domain tubulates and vesiculates lipid membranes in vitro via its crescent-shaped dimer and four amphipathic helices that penetrate into membranes as wedges. Like F-BAR domains, endophilin N-BAR also forms a scaffold on membrane tubes. Unlike F-BARs, endophilin N-BARs have N-terminal H0 amphipathic helices that are proposed to interact with other N-BARs in oligomer lattices. Recent cryo-electron microscopy reconstructions shed light on the organization of the N-BAR lattice coats on a nanometer scale. However, because of the resolution of the reconstructions, the precise positioning of the amphipathic helices is still ambiguous. In this work, we applied a coarse-grained model to study various membrane remodeling scenarios induced by endophilin N-BARs. We found that H0 helices of N-BARs prefer to align in an antiparallel manner at two ends of the protein to form a stable lattice. The deletion of H0 helices causes disruption of the lattice. In addition, we analyzed the persistence lengths of the protein-coated tubes and found that the stiffness of endophilin N-BAR-coated tubules qualitatively agrees with previous experimental work studying N-BAR-coated tubules. Large-scale simulations on membrane liposomes revealed a systematic relation between H0 helix density and local membrane curvature fluctuations. The data also suggest that the H0 helix is required for BARs to form organized structures on the liposome, further illustrating its important function.
The Kinetics of Phase Separation in Asymmetric Membranes
Wallace, Elizabeth J.; Hooper, Nigel M.; Olmsted, Peter D.
2005-01-01
Phase separation in a model asymmetric membrane is studied using Monte Carlo techniques. The membrane comprises two species of particles, which mimic different lipids in lipid bilayers and separately possess either zero or non-zero spontaneous curvatures. We study the influence of phase separation on membrane shape and the influence of the coupling of composition and height dynamics on phase separation and domain growth, via both the degree of shape asymmetry and relative kinetic coefficients for height relaxation. PMID:15778446
Curvature properties of some class of warped product manifolds
NASA Astrophysics Data System (ADS)
Deszcz, Ryszard; Głogowska, Małgorzata; Jełowicki, Jan; Zafindratafa, Georges
2016-10-01
We prove that warped product manifolds with p-dimensional base, p = 1, 2, satisfy some pseudosymmetry type curvature conditions. These conditions are formed from the metric tensor g, the Riemann-Christoffel curvature tensor R, the Ricci tensor S and the Weyl conformal curvature C of the considered manifolds. The main result of the paper states that if p = 2 and the fiber is a semi-Riemannian space of constant curvature (when n is greater or equal to 5) then the (0, 6)-tensors R ṡ R - Q(S,R) and C ṡ C of such warped products are proportional to the (0, 6)-tensor Q(g,C) and the tensor C is a linear combination of some Kulkarni-Nomizu products formed from the tensors g and S. We also obtain curvature properties of this kind of quasi-Einstein and 2-quasi-Einstein manifolds, and in particular, of the Goedel metric, generalized spherically symmetric metrics and generalized Vaidya metrics.
Topological Transitions in Mitochondrial Membranes controlled by Apoptotic Proteins
NASA Astrophysics Data System (ADS)
Hwee Lai, Ghee; Sanders, Lori K.; Mishra, Abhijit; Schmidt, Nathan W.; Wong, Gerard C. L.; Ivashyna, Olena; Schlesinger, Paul H.
2010-03-01
The Bcl-2 family comprises pro-apoptotic proteins, capable of permeabilizing the mitochondrial membrane, and anti-apoptotic members interacting in an antagonistic fashion to regulate programmed cell death (apoptosis). They offer potential therapeutic targets to re-engage cellular suicide in tumor cells but the extensive network of implicated protein-protein interactions has impeded full understanding of the decision pathway. We show, using synchrotron x-ray diffraction, that pro-apoptotic proteins interact with mitochondrial-like model membranes to generate saddle-splay (negative Gaussian) curvature topologically required for pore formation, while anti-apoptotic proteins can deactivate curvature generation by molecules drastically different from Bcl-2 family members and offer evidence for membrane-curvature mediated interactions general enough to affect very disparate systems.
Patient preferences for dentists.
Furnham, Adrian; Swami, Viren
2009-03-01
A representative British sample of 257 adults completed a questionnaire in which they indicated their preference for eight dentists stratified by sex, age, and training location. These data were analysed in relation to participants' own sex and age, the latter stratified by a median split. A mixed analysis of variance indicated two main effects: a preference for younger (rather than older) dentists and dentists trained in Britain (rather than in Asia). There were also a significant two-way interaction between dentist age and training location: for the British-trained there was a preference for younger dentists, whereas for the Asian-trained there was a preference for older dentists. Limitations of the study design are discussed in conclusion.
Focus control system for stretched-membrane mirror module
Butler, B.L.; Beninga, K.J.
1991-05-21
A focus control system dynamically sets and controls the focal length of a reflective membrane supported between a perimeter frame. A rear membrane is also supported between the perimeter frame rearward and spaced apart from a back side of the reflective membrane. The space between the membranes defines a plenum space into which a mass of gas at a first pressure is inserted. The pressure differential between the first pressure and an external pressure, such as the atmospheric pressure, causes the reflective membrane to assume a first curvature relative to a reference plane associated with the perimeter frame. This curvature defines the focal length of the reflective membrane. The focal length is dynamically controlled by changing the volume of the plenum space, thereby changing the first pressure. The system can be used to change or maintain the pressure differential and hence the front membrane curvature. The plenum volume is changed by pushing or pulling on a central section of the rear membrane using a suitable actuator. Sensing means continuously sense the location of the reflective membrane relative to the reference plane. This sensed position is compared to a reference position, and a resulting error signal, comprising the difference between the sensed position and reference position, drives the actuator in a direction to minimize the difference. A vent value compensates for temperature changes or leaks in the closed volume by allowing the pressure differential to be adjusted as required to center the working range of the actuator about the desired focal length. 13 figures.
Focus control system for stretched-membrane mirror module
Butler, Barry L.; Beninga, Kelly J.
1991-01-01
A focus control system dynamically sets and controls the focal length of a reflective membrane supported between a perimeter frame. A rear membrane is also supported between the perimeter frame rearward and spaced apart from a back side of the reflective membrane. The space between the membranes defines a plenum space into which a mass of gas at a first pressure is inserted. The pressure differential between the first pressure and an external pressure, such as the atmospheric pressure, causes the reflective membrane to assume a first curvature relative to a reference plane associated with the perimeter frame. This curvature defines the focal length of the reflective membrane. The focal length is dynamically controlled by changing the volume of the plenum space, thereby changing the first pressure. The system can be used to change or maintain the pressure differential and hence the front membrane curvature. The plenum volume is changed by pushing or pulling on a central section of the rear membrane using a suitable actuator. Sensing means continuously sense the location of the reflective membrane relative to the reference plane. This sensed position is compared to a reference position, and a resulting error signal, comprising the difference between the sensed position and reference position, drives the actuator in a direction to minimize the difference. A vent value compensates for temperature changes or leaks in the closed volume by allowing the pressure differential to be adjusted as required to center the working range of the actuator about the desired focal length.
Curvature affects Doppler investigation of vessels: implications for clinical practice.
Balbis, S; Roatta, S; Guiot, C
2005-01-01
In clinical practice, blood velocity estimations from Doppler examination of curved vascular segments are normally different from those of nearby straight segments. The observed "accelerations," sometimes considered as a sort of stochastic disturbances, can actually be related to very specific physical effects due to vessel curvature (i.e., the development of nonaxial velocity [NAV] components) and the spreading of the axial velocity direction in the Doppler sample volume with respect to the insonation axis. The relevant phenomena and their dependence on the radius of curvature of the vessels and on the insonation angle are investigated with a beam-vessel geometry as close as possible to clinical setting, with the simplifying assumptions of steady flow, mild vessel curvature, uniform ultrasonic beam and complete vessel insonation. The insonation angles that minimize the errors are provided on the basis of the study results.
Curvature-dependent surface energy and implications for nanostructures
NASA Astrophysics Data System (ADS)
Chhapadia, P.; Mohammadi, P.; Sharma, P.
2011-10-01
At small length scales, several size-effects in both physical phenomena and properties can be rationalized by invoking the concept of surface energy. Conventional theoretical frameworks of surface energy, in both the mechanics and physics communities, assume curvature independence. In this work we adopt a simplified and linearized version of a theory proposed by Steigmann-Ogden to capture curvature-dependence of surface energy. Connecting the theory to atomistic calculations and the solution to an illustrative paradigmatical problem of a bent cantilever beam, we catalog the influence of curvature-dependence of surface energy on the effective elastic modulus of nanostructures. The observation in atomistic calculations that the elastic modulus of bent nanostructures is dramatically different than under tension - sometimes softer, sometimes stiffer - has been a source of puzzlement to the scientific community. We show that the corrected surface mechanics framework provides a resolution to this issue. Finally, we propose an unambiguous definition of the thickness of a crystalline surface.
Spinor description of the curvatures of D = 5 gauge fields
NASA Astrophysics Data System (ADS)
Uvarov, D. V.
2017-03-01
Spinor description of the curvatures of D = 5 Yang-Mills, Rarita-Schwinger and gravitational fields is considered. Restrictions imposed on the curvature spinors by the dynamical equations and Bianchi identities are studied. In the absence of sources symmetric curvature spinors with 2 s indices obey first-order equations that in the linearized limit reduce to Dirac-type equations for massless free fields. These equations allow for a higher-spin generalization similarly to 4 d case. Their solution in the form of the integral over Lorentz-harmonic variables parametrizing coset manifold SO(1, 4)/( SO(1,1) × ISO(3)) isomorphic to the three-sphere is considered.
Geometric curvature and phase of the Rabi model
Mao, Lijun; Huai, Sainan; Guo, Liping; Zhang, Yunbo
2015-11-15
We study the geometric curvature and phase of the Rabi model. Under the rotating-wave approximation (RWA), we apply the gauge independent Berry curvature over a surface integral to calculate the Berry phase of the eigenstates for both single and two-qubit systems, which is found to be identical with the system of spin-1/2 particle in a magnetic field. We extend the idea to define a vacuum-induced geometric curvature when the system starts from an initial state with pure vacuum bosonic field. The induced geometric phase is related to the average photon number in a period which is possible to measure in the qubit–cavity system. We also calculate the geometric phase beyond the RWA and find an anomalous sudden change, which implies the breakdown of the adiabatic theorem and the Berry phases in an adiabatic cyclic evolution are ill-defined near the anti-crossing point in the spectrum.
Mundschau, Michael V.
2005-05-31
Composite hydrogen transport membranes, which are used for extraction of hydrogen from gas mixtures are provided. Methods are described for supporting metals and metal alloys which have high hydrogen permeability, but which are either too thin to be self supporting, too weak to resist differential pressures across the membrane, or which become embrittled by hydrogen. Support materials are chosen to be lattice matched to the metals and metal alloys. Preferred metals with high permeability for hydrogen include vanadium, niobium, tantalum, zirconium, palladium, and alloys thereof. Hydrogen-permeable membranes include those in which the pores of a porous support matrix are blocked by hydrogen-permeable metals and metal alloys, those in which the pores of a porous metal matrix are blocked with materials which make the membrane impervious to gases other than hydrogen, and cermets fabricated by sintering powders of metals with powders of lattice-matched ceramic.
Fuel cell membrane humidification
Wilson, Mahlon S.
1999-01-01
A polymer electrolyte membrane fuel cell assembly has an anode side and a cathode side separated by the membrane and generating electrical current by electrochemical reactions between a fuel gas and an oxidant. The anode side comprises a hydrophobic gas diffusion backing contacting one side of the membrane and having hydrophilic areas therein for providing liquid water directly to the one side of the membrane through the hydrophilic areas of the gas diffusion backing. In a preferred embodiment, the hydrophilic areas of the gas diffusion backing are formed by sewing a hydrophilic thread through the backing. Liquid water is distributed over the gas diffusion backing in distribution channels that are separate from the fuel distribution channels.
Govindarajan, Sutharsan; Elisha, Yair; Nevo-Dinur, Keren; Amster-Choder, Orna
2013-01-01
ABSTRACT The bacterial cell poles are emerging as subdomains where many cellular activities take place, but the mechanisms for polar localization are just beginning to unravel. The general phosphotransferase system (PTS) proteins, enzyme I (EI) and HPr, which control preferential use of carbon sources in bacteria, were recently shown to localize near the Escherichia coli cell poles. Here, we show that EI localization does not depend on known polar constituents, such as anionic lipids or the chemotaxis receptors, and on the cell division machinery, nor can it be explained by nucleoid occlusion or localized translation. Detection of the general PTS proteins at the budding sites of endocytotic-like membrane invaginations in spherical cells and their colocalization with the negative curvature sensor protein DivIVA suggest that geometric cues underlie localization of the PTS system. Notably, the kinetics of glucose uptake by spherical and rod-shaped E. coli cells are comparable, implying that negatively curved “pole-like” sites support not only the localization but also the proper functioning of the PTS system in cells with different shapes. Consistent with the curvature-mediated localization model, we observed the EI protein from Bacillus subtilis at strongly curved sites in both B. subtilis and E. coli. Taken together, we propose that changes in cell architecture correlate with dynamic survival strategies that localize central metabolic systems like the PTS to subcellular domains where they remain active, thus maintaining cell viability and metabolic alertness. PMID:24129255
Zhou, Zhou; Munteanu, Emilia Laura; He, Jun; Ursell, Tristan; Bathe, Mark; Huang, Kerwyn Casey; Chang, Fred
2015-01-01
The functions of the actin-myosin–based contractile ring in cytokinesis remain to be elucidated. Recent findings show that in the fission yeast Schizosaccharomyces pombe, cleavage furrow ingression is driven by polymerization of cell wall fibers outside the plasma membrane, not by the contractile ring. Here we show that one function of the ring is to spatially coordinate septum cell wall assembly. We develop an improved method for live-cell imaging of the division apparatus by orienting the rod-shaped cells vertically using microfabricated wells. We observe that the septum hole and ring are circular and centered in wild-type cells and that in the absence of a functional ring, the septum continues to ingress but in a disorganized and asymmetric manner. By manipulating the cleavage furrow into different shapes, we show that the ring promotes local septum growth in a curvature-dependent manner, allowing even a misshapen septum to grow into a more regular shape. This curvature-dependent growth suggests a model in which contractile forces of the ring shape the septum cell wall by stimulating the cell wall machinery in a mechanosensitive manner. Mechanical regulation of the cell wall assembly may have general relevance to the morphogenesis of walled cells. PMID:25355954
Curvature of the spectral energy distributions of blazars
Chen, Liang
2014-06-20
In this paper, spectral energy distributions (SED) of both synchrotron and inverse Compton (IC) components of a sample of Fermi bright blazars are fitted by a log-parabolic law. The second-degree term of the log parabola measures the curvature of an SED. We find a statistically significant correlation between the synchrotron peak frequency and its curvature. This result is in agreement with the theoretical prediction and confirms previous studies that dealt with a single source with observations at various epochs or a small sample. If a broken power law is employed to fit the SED, the difference between the two spectral indices (i.e., |α{sub 2} – α{sub 1}|) can be considered a 'surrogate' of the SED curvature. We collect data from the literature and find a correlation between the synchrotron peak frequency and the spectral difference. We do not find a significant correlation between the IC peak frequency and its curvature, which may be caused by a complicated seed photon field. It is also found that the synchrotron curvatures are on average larger than those of IC curvatures, and there is no correlation between these two parameters. As suggested by previous works, both the log-parabolic law of the SED and the above correlation can be explained by statistical and/or stochastic particle accelerations. Based on a comparison of the slops of the correlation, our result seems to favor stochastic acceleration mechanisms and emission processes. Additional evidence, including SED modeling, particle acceleration simulation, and comparisons between some predictions and empirical relations/correlations, also seems to support the idea that the electron energy distribution (and/or synchrotron SED) may be log-parabolic.
Preference for newspaper size.
Tsang, Steve N H; Hoffmann, Errol R; Chan, Alan H S
2014-05-01
The past few years has seen a change in the size of newspapers, with publishers moving to a smaller size format. Five 'standard' newspaper sizes are used in different countries: Broadsheet, Rhensch, Tabloid, Tall Tabloid and Berliner. These papers vary in both width and height of pages and hence there are implications for human reading comfort, which may be dependent on reading location such as on a lounge chair or on a train. Experiments were carried out to determine preferences for the different sizes and to relate these preferences to the geometric characteristics of the newspapers. For both comfortable and cramped/uncomfortable reading conditions, the rank order of preference for paper types was, from least to most-preferred, Broadsheet, Rhensch, Berliner, Tall Tabloid and Tabloid. Preferences were much stronger when determined in cramped/uncomfortable reading conditions, where most comparisons were significantly different. There was good correlation between participant ratings on several scales and preference, where most factors were related to comfort of holding and controlling the paper.
Modeling membrane shaping by proteins: focus on EHD2 and N-BAR domains.
Campelo, Felix; Fabrikant, Gur; McMahon, Harvey T; Kozlov, Michael M
2010-05-03
Cellular membranes are highly dynamic, undergoing both persistent and dynamic shape changes driven by specialized proteins. The observed membrane shaping can be simple deformations of existing shapes or membrane remodeling involving fission or fusion. Here we describe several mechanistic principles by which membrane shaping proteins act. We especially consider models for membrane bending and fission by EHD2 proteins and membrane bending by N-BAR domains. There are major challenges ahead to understand the general principles by which diverse membrane bending proteins act and to understand how some proteins appear to span multiple modes of action from driving curvature to inducing membrane remodeling.
Gas phase fractionation method using porous ceramic membrane
Peterson, Reid A.; Hill, Jr., Charles G.; Anderson, Marc A.
1996-01-01
Flaw-free porous ceramic membranes fabricated from metal sols and coated onto a porous support are advantageously used in gas phase fractionation methods. Mean pore diameters of less than 40 .ANG., preferably 5-20 .ANG. and most preferably about 15 .ANG., are permeable at lower pressures than existing membranes. Condensation of gases in small pores and non-Knudsen membrane transport mechanisms are employed to facilitate and increase membrane permeability and permselectivity.
Adiabatic approximation via hodograph translation and zero-curvature equations
NASA Astrophysics Data System (ADS)
Karasev, M. V.
2014-04-01
For quantum as well classical slow-fast systems, we develop a general method which allows one to compute the adiabatic invariant (approximate integral of motion), its symmetries, the adiabatic guiding center coordinates and the effective scalar Hamiltonian in all orders of a small parameter. The scheme does not exploit eigenvectors or diagonalization, but is based on the ideas of isospectral deformation and zero-curvature equations, where the role of "time" is played by the adiabatic (quantization) parameter. The algorithm includes the construction of the zero-curvature adiabatic connection and its splitting generated by averaging up to an arbitrary order in the small parameter.
Effects of Membrane Charge and Order on Membrane Binding of the Retroviral Structural Protein Gag
Wen, Yi; Dick, Robert A.
2016-01-01
ABSTRACT The retroviral structural protein Gag binds to the inner leaflet of the plasma membrane (PM), and many cellular proteins do so as well. We used Rous sarcoma virus (RSV) Gag together with membrane sensors to study the principles governing peripheral protein membrane binding, including electrostatics, specific recognition of phospholipid headgroups, sensitivity to phospholipid acyl chain compositions, preference for membrane order, and protein multimerization. We used an in vitro liposome-pelleting assay to test protein membrane binding properties of Gag, the well-characterized MARCKS peptide, a series of fluorescent electrostatic sensor proteins (mNG-KRn), and the specific phosphatidylserine (PS) binding protein Evectin2. RSV Gag and mNG-KRn bound well to membranes with saturated and unsaturated acyl chains, whereas the MARCKS peptide and Evectin2 preferentially bound to membranes with unsaturated acyl chains. To further discriminate whether the primary driving force for Gag membrane binding is electrostatic interactions or preference for membrane order, we measured protein binding to giant unilamellar vesicles (GUVs) containing the same PS concentration in both disordered (Ld) and ordered (Lo) phases. RSV Gag and mNG-KRn membrane association followed membrane charge, independent of membrane order. Consistent with pelleting data, the MARCKS peptide showed preference for the Ld domain. Surprisingly, the PS sensor Evectin2 bound to the PS-rich Ld domain with 10-fold greater affinity than to the PS-rich Lo domain. In summary, we found that RSV Gag shows no preference for membrane order, while proteins with reported membrane-penetrating domains show preference for disordered membranes. IMPORTANCE Retroviral particles assemble on the PM and bud from infected cells. Our understanding of how Gag interacts with the PM and how different membrane properties contribute to overall Gag assembly is incomplete. This study examined how membrane charge and membrane order
NASA Technical Reports Server (NTRS)
Bagshaw, S. L.; Cleland, R. E.
1990-01-01
Gravitropic curvature results from unequal growth rates on the upper and lower sides of horizontal stems. These unequal growth rates could be due to differences in wall extensibility between the two sides. To test this, the time course of curvature of horizontal sunflower (Helianthus annuus L.) hypocotyls was determined and compared with the time courses of changes in Instron-measured wall extensibility (PEx) of the upper and lower epidermal layers. As gravicurvature developed, so did the difference in PEx between the upper and lower epidermis. The enhanced growth rate on the lower side during the period of maximum increase in curvature was matched by PEx values greater than those of the vertical control, while the inhibited growth rate on the upper side was accompanied by PEx values below that of the control. The close correlation between changes in growth rates and alterations in PEx demonstrates that changes in wall extensibility play a major role in controlling gravicurvature.
Mingenbach, William A.
1988-01-01
A device is provided for stabilizing a flexible membrane secured within a frame, wherein a plurality of elongated arms are disposed radially from a central hub which penetrates the membrane, said arms imposing alternately against opposite sides of the membrane, thus warping and tensioning the membrane into a condition of improved stability. The membrane may be an opaque or translucent sheet or other material.
Dynamics of Membranes Driven by Actin Polymerization
Gov, Nir S.; Gopinathan, Ajay
2006-01-01
A motile cell, when stimulated, shows a dramatic increase in the activity of its membrane, manifested by the appearance of dynamic membrane structures such as lamellipodia, filopodia, and membrane ruffles. The external stimulus turns on membrane bound activators, like Cdc42 and PIP2, which cause increased branching and polymerization of the actin cytoskeleton in their vicinity leading to a local protrusive force on the membrane. The emergence of the complex membrane structures is a result of the coupling between the dynamics of the membrane, the activators, and the protrusive forces. We present a simple model that treats the dynamics of a membrane under the action of actin polymerization forces that depend on the local density of freely diffusing activators on the membrane. We show that, depending on the spontaneous membrane curvature associated with the activators, the resulting membrane motion can be wavelike, corresponding to membrane ruffling and actin waves, or unstable, indicating the tendency of filopodia to form. Our model also quantitatively explains a variety of related experimental observations and makes several testable predictions. PMID:16239328
Rigid rod anchored to infinite membrane.
Guo, Kunkun; Qiu, Feng; Zhang, Hongdong; Yang, Yuliang
2005-08-15
We investigate the shape deformation of an infinite membrane anchored by a rigid rod. The density profile of the rod is calculated by the self-consistent-field theory and the shape of the membrane is predicted by the Helfrich membrane elasticity theory [W. Helfrich, Z. Naturforsch. 28c, 693 (1973)]. It is found that the membrane bends away from the rigid rod when the interaction between the rod and the membrane is repulsive or weakly attractive (adsorption). However, the pulled height of the membrane at first increases and then decreases with the increase of the adsorption strength. Compared to a Gaussian chain with the same length, the rigid rod covers much larger area of the membrane, whereas exerts less local entropic pressure on the membrane. An evident gap is found between the membrane and the rigid rod because the membrane's curvature has to be continuous. These behaviors are compared with that of the flexible-polymer-anchored membranes studied by previous Monte Carlo simulations and theoretical analysis. It is straightforward to extend this method to more complicated and real biological systems, such as infinite membrane/multiple chains, protein inclusion, or systems with phase separation.
Membranes, mechanics, and intracellular transport
NASA Astrophysics Data System (ADS)
Parthasarathy, Raghuveer
2012-10-01
Cellular membranes are remarkable materials -- self-assembled, flexible, two-dimensional fluids. Understanding how proteins manipulate membrane curvature is crucial to understanding the transport of cargo in cells, yet the mechanical activities of trafficking proteins remain poorly understood. Using an optical-trap based assay involving dynamic deformation of biomimetic membranes, we have examined the behavior of Sar1, a key component of the COPII family of transport proteins. We find that Sar1 from yeast (S. cerevisiae) lowers membrane rigidity by up to 100% as a function of its concentration, thereby lowering the energetic cost of membrane deformation. Human Sar1 proteins can also lower the mechanical rigidity of the membranes to which they bind. However, unlike the yeast proteins, the rigidity is not a monotonically decreasing function of concentration but rather shows increased rigidity and decreased mobility at high concentrations that implies interactions between proteins. In addition to describing this study of membrane mechanics, I'll also discuss some topics relevant to a range of biophysical investigations, such as the insights provided by imaging methods and open questions in the dynamics of multicellular systems.
Directable weathering of concave rock using curvature estimation.
Jones, Michael D; Farley, McKay; Butler, Joseph; Beardall, Matthew
2010-01-01
We address the problem of directable weathering of exposed concave rock for use in computer-generated animation or games. Previous weathering models that admit concave surfaces are computationally inefficient and difficult to control. In nature, the spheroidal and cavernous weathering rates depend on the surface curvature. Spheroidal weathering is fastest in areas with large positive mean curvature and cavernous weathering is fastest in areas with large negative mean curvature. We simulate both processes using an approximation of mean curvature on a voxel grid. Both weathering rates are also influenced by rock durability. The user controls rock durability by editing a durability graph before and during weathering simulation. Simulations of rockfall and colluvium deposition further improve realism. The profile of the final weathered rock matches the shape of the durability graph up to the effects of weathering and colluvium deposition. We demonstrate the top-down directability and visual plausibility of the resulting model through a series of screenshots and rendered images. The results include the weathering of a cube into a sphere and of a sheltered inside corner into a cavern as predicted by the underlying geomorphological models.
Effect of asymmetric auxin application on Helianthus hypocotyl curvature
NASA Technical Reports Server (NTRS)
Migliaccio, F.; Rayle, D. L.
1989-01-01
Indole-3-acetic acid was applied asymmetrically to the hypocotyls of sunflower (Helianthus annuus L.) seedlings. After 5 hours on a clinostat, auxin gradients as small as 1 to 1.3 produced substantial (more than 60 degrees) hypocotyl curvature. This result suggests the asymmetric growth underlying hypocotyl gravitropism can be explained by lateral auxin redistribution.
Frustration and curvature - Glasses and the cholesteric blue phase
NASA Technical Reports Server (NTRS)
Sethna, J. P.
1983-01-01
An analogy is drawn between continuum elastic theories of the blue phase of cholesteric liquid crystals and recent theories of frustration in configurational glasses. Both involve the introduction of a lattice of disclination lines to relieve frustration; the frustration is due to an intrinsic curvature in the natural form of parallel transport. A continuum theory of configurational glasses is proposed.
In vitro dimensions and curvatures of human lenses.
Rosen, Alexandre M; Denham, David B; Fernandez, Viviana; Borja, David; Ho, Arthur; Manns, Fabrice; Parel, Jean-Marie; Augusteyn, Robert C
2006-03-01
The purpose of this study was to determine dimensions and curvatures of excised human lenses using the technique of shadowphotogrammetry. A modified optical comparator and digital camera were used to photograph magnified sagittal and coronal lens profiles. Equatorial diameter, anterior and posterior sagittal thickness, anterior and posterior curvatures, and shape factors were obtained from these images. The data were used to calculate lens volumes, which were compared with the lens weights. Measurements were made on 37 human lenses ranging in age from 20 to 99 years. These showed that lens dimensions and the anterior radius of curvature increase linearly throughout adult life while posterior curvature remains constant. The relative shape (or aspect ratio) of the posterior lens is unchanged through adult life since both equatorial diameter and posterior thickness increase at the same rate. The ratio of anterior thickness to posterior thickness is constant at 0.70. It is suggested that in vivo forces alter the apparent location of the lens equator, that the in vitro lens shape corresponds to the maximally accommodated shape in vivo and that the shapes of the accommodated and unaccommodated lens progressively converge toward each other due to lens growth with age, with a convergence point located near the age of total loss of accommodation (55-60 years). Together, these observations provide additional support for the Helmholtz theory of accommodation.
Equilibrium models of coronal loops that involve curvature and buoyancy
Hindman, Bradley W.; Jain, Rekha
2013-12-01
We construct magnetostatic models of coronal loops in which the thermodynamics of the loop is fully consistent with the shape and geometry of the loop. This is achieved by treating the loop as a thin, compact, magnetic fibril that is a small departure from a force-free state. The density along the loop is related to the loop's curvature by requiring that the Lorentz force arising from this deviation is balanced by buoyancy. This equilibrium, coupled with hydrostatic balance and the ideal gas law, then connects the temperature of the loop with the curvature of the loop without resorting to a detailed treatment of heating and cooling. We present two example solutions: one with a spatially invariant magnetic Bond number (the dimensionless ratio of buoyancy to Lorentz forces) and the other with a constant radius of the curvature of the loop's axis. We find that the density and temperature profiles are quite sensitive to curvature variations along the loop, even for loops with similar aspect ratios.
Active optics for high-dynamic variable curvature mirrors.
Hugot, Emmanuel; Ferrari, Marc; Lemaitre, Gérard R; Madec, Fabrice; Vives, Sébastien; Chardin, Elodie; Le Mignant, David; Cuby, Jean-Gabriel
2009-10-01
Variable curvature mirrors of large amplitude are designed by using finite element analysis. The specific case studied reaches at least a 800 mum sag with an optical quality better than lambda/5 over a 120 mm clear aperture. We highlight the geometrical nonlinearity and the plasticity effect.
Positivity of Curvature-Squared Corrections in Gravity.
Cheung, Clifford; Remmen, Grant N
2017-02-03
We study the Gauss-Bonnet (GB) term as the leading higher-curvature correction to pure Einstein gravity. Assuming a tree-level ultraviolet completion free of ghosts or tachyons, we prove that the GB term has a nonnegative coefficient in dimensions greater than 4. Our result follows from unitarity of the spectral representation for a general ultraviolet completion of the GB term.
Simple partitions of a hyperbolic plane of positive curvature
Romakina, Lyudmila N
2012-09-30
We construct special monohedral isotropic partitions with symmetries of the hyperbolic plane H of positive curvature with a simple 4-contour as a cell. An analogue of mosaic in these partitions called a tiling is introduced. Also we consider some fractal tilings. The existence of band tilings in each homological series with code (m, n) is proved. Bibliography: 14 titles.
Determination of light beam curvature in a rotating Luneburg lens
NASA Astrophysics Data System (ADS)
Gladyshev, V. O.; Bazleva, D. D.; Tereshin, A. A.; Gladysheva, T. M.
2016-09-01
We have determined the curvature of a beam of coherent electromagnetic radiation and its angular and linear deviation in a rotating microsatellite representing a Luneburg lens in the optical segment of accuracy augmentation for new-generation global navigation satellite systems.
Equilibrium Models of Coronal Loops That Involve Curvature and Buoyancy
NASA Astrophysics Data System (ADS)
Hindman, Bradley W.; Jain, Rekha
2013-12-01
We construct magnetostatic models of coronal loops in which the thermodynamics of the loop is fully consistent with the shape and geometry of the loop. This is achieved by treating the loop as a thin, compact, magnetic fibril that is a small departure from a force-free state. The density along the loop is related to the loop's curvature by requiring that the Lorentz force arising from this deviation is balanced by buoyancy. This equilibrium, coupled with hydrostatic balance and the ideal gas law, then connects the temperature of the loop with the curvature of the loop without resorting to a detailed treatment of heating and cooling. We present two example solutions: one with a spatially invariant magnetic Bond number (the dimensionless ratio of buoyancy to Lorentz forces) and the other with a constant radius of the curvature of the loop's axis. We find that the density and temperature profiles are quite sensitive to curvature variations along the loop, even for loops with similar aspect ratios.
Intracellular magnetophoresis of amyloplasts and induction of root curvature
NASA Technical Reports Server (NTRS)
Kuznetsov, O. A.; Hasenstein, K. H.
1996-01-01
High-gradient magnetic fields (HGMFs) were used to induce intracellular magnetophoresis of amyloplasts. The HGMFs were generated by placing a small ferromagnetic wedge into a uniform magnetic field or at the gap edge between two permanent magnets. In the vicinity of the tip of the wedge the dynamic factor of the magnetic field, delta(H2/2), was about 10(9) Oe2.cm-1, which subjected the amyloplasts to a force comparable to that of gravity. When roots of 2-d-old seedlings of flax (Linum usitatissimum L.) were positioned vertically and exposed to an HGMF, curvature away from the wedge was transient and lasted approximately 1 h. Average curvature obtained after placing magnets, wedge and seedlings on a 1-rpm clinostat for 2 h was 33 +/- 5 degrees. Roots of horizontally placed control seedlings without rotation curved about 47 +/- 4 degrees. The time course of curvature and changes in growth rate were similar for gravicurvature and for root curvature induced by HGMFs. Microscopy showed displacement of amyloplasts in vitro and in vivo. Studies with Arabidopsis thaliana (L.) Heynh. showed that the wild type responded to HGMFs but the starchless mutant TC7 did not. The data indicate that a magnetic force can be used to study the gravisensing and response system of roots.
Intracellular magnetophoresis of amyloplasts and induction of root curvature.
Kuznetsov, O A; Hasenstein, K H
1996-01-01
High-gradient magnetic fields (HGMFs) were used to induce intracellular magnetophoresis of amyloplasts. The HGMFs were generated by placing a small ferromagnetic wedge into a uniform magnetic field or at the gap edge between two permanent magnets. In the vicinity of the tip of the wedge the dynamic factor of the magnetic field, delta(H2/2), was about 10(9) Oe2.cm-1, which subjected the amyloplasts to a force comparable to that of gravity. When roots of 2-d-old seedlings of flax (Linum usitatissimum L.) were positioned vertically and exposed to an HGMF, curvature away from the wedge was transient and lasted approximately 1 h. Average curvature obtained after placing magnets, wedge and seedlings on a 1-rpm clinostat for 2 h was 33 +/- 5 degrees. Roots of horizontally placed control seedlings without rotation curved about 47 +/- 4 degrees. The time course of curvature and changes in growth rate were similar for gravicurvature and for root curvature induced by HGMFs. Microscopy showed displacement of amyloplasts in vitro and in vivo. Studies with Arabidopsis thaliana (L.) Heynh. showed that the wild type responded to HGMFs but the starchless mutant TC7 did not. The data indicate that a magnetic force can be used to study the gravisensing and response system of roots.
Effect of topological defects and curvature on anisotropic crystal growth
NASA Astrophysics Data System (ADS)
Azadi, Amir; Grason, Gregory M.
2015-03-01
The equilibrium shapes and symmetries of crystals are vestiges of the physical principles underlying their formation. We perform particle-based simulations guided by analytical analysis to investigate the structure of crystalline domains on curved substrates, a focus on the impact of topological defects on domain morphology. We find at low area fraction, as has been argued previously, that isotropic crystal growth with relatively compact domains generates large curvature-induced strains accommodated by relative ductile interactions, while the formation of anisotropic ribbon-like structures with lower-curvature induced stresses, introduces a larger line tension cost, and is thus favored for brittle crystals. Our results show that for ductile crystals with large surface coverage, appearance of stable topological defects precludes the formation of anisotropic, ribbon domains. However branch-like structures with large interfacial area are stable for certain values of intermediate curvature and crystalline ductility. These processes are guided by the interplay between elastic shape instability, defects, and curvature, where pattern formations are not related to kinetic instabilities.
Negative voltage bandgap reference with multilevel curvature compensation technique
NASA Astrophysics Data System (ADS)
Xi, Liu; Qian, Liu; Xiaoshi, Jin; Yongrui, Zhao; Lee, Jong-Ho
2016-05-01
A novel high-order curvature compensation negative voltage bandgap reference (NBGR) based on a novel multilevel compensation technique is introduced. Employing an exponential curvature compensation (ECC) term with many high order terms in itself, in a lower temperature range (TR) and a multilevel curvature compensation (MLCC) term in a higher TR, a flattened and better effect of curvature compensation over the TR of 165 °C (-40 to 125 °C) is realised. The MLCC circuit adds two convex curves by using two sub-threshold operated NMOS. The proposed NBGR implemented in the Central Semiconductor Manufacturing Corporation (CSMC) 0.5 μm BCD technology demonstrates an accurate voltage of -1.183 V with a temperature coefficient (TC) as low as 2.45 ppm/°C over the TR of 165 °C at a -5.0 V power supply; the line regulation is 3 mV/V from a -5 to -2 V supply voltage. The active area of the presented NBGR is 370 × 180 μm2. Project supported by the Fund of Liaoning Province Education Department (No. L2013045).
Special-holonomy manifolds and quartic-curvature string corrections
NASA Astrophysics Data System (ADS)
Stelle, K. S.
2004-06-01
The quartic-curvature corrections derived from string theory have a very specific impact on the geometry of target-space manifolds of special holonomy. In the cases of Calabi-Yau manifolds and D = 7 manifolds of G2 holonomy, we show how the corrections conspire to preserve the unbroken supersymmetry of these backgrounds.
Controlling Protein Oligomerization with Surface Curvature on the Nanoscale
NASA Astrophysics Data System (ADS)
Kurylowicz, Marty; Dutcher, John
2011-03-01
We investigate the effect of surface curvature on the conformation of beta-lactoglobulin (β LG) using Single Molecule Force Spectroscopy. β LG is a model interfacial protein which stabilizes oil droplets in milk and is known to undergo structural rearrangement when adsorbed onto a surface. We reliably control nanoscale surface curvature by creating close-packed monolayers of monodisperse polystyrene (PS) nanoparticles with diameters of 20, 40, 60, 80 and 140 nm, which are stable in aqueous buffer. By adsorbing β LG onto these hydrophobic surfaces and collecting force-extension curves in the fluid phase we can compare the conformation of β LG on 5 different surface curvatures with that on a flat PS film. We demonstrate a transition from oligomeric to monomeric β LG as the surface curvature is increased. Histograms of contour length from fits to peaks in the force-extension curves show a single maximum near 30 nm for β LG adsorbed onto nanoparticles with diameters less than 80 nm. For the larger nanoparticles, the histogram approaches that observed for β LG adsorbed onto a flat PS film, with maxima indicative of β LG dimers and trimers.
Biostereometric Analysis Of Spine Curvatures On Living Human Body
NASA Astrophysics Data System (ADS)
Pineau, J.-C.; Ignazi, G.; Prudent, J.
1986-07-01
An analysis of the external and internal curvatures of spine was carried out on a sample of nine males from biostereometric measurements for different imposed postures. The results concerning the modifications of the external shape of the curves are used for the 3-D human body modeling in C.A.D. applications.
Symmetric curvature descriptors for label-free analysis of DNA
Buzio, Renato; Repetto, Luca; Giacopelli, Francesca; Ravazzolo, Roberto; Valbusa, Ugo
2014-01-01
High-resolution microscopy techniques such as electron microscopy, scanning tunnelling microscopy and atomic force microscopy represent well-established, powerful tools for the structural characterization of adsorbed DNA molecules at the nanoscale. Notably, the analysis of DNA contours allows mapping intrinsic curvature and flexibility along the molecular backbone. This is particularly suited to address the impact of the base-pairs sequence on the local conformation of the strands and plays a pivotal role for investigations relating the inherent DNA shape and flexibility to other functional properties. Here, we introduce novel chain descriptors aimed to characterize the local intrinsic curvature and flexibility of adsorbed DNA molecules with unknown orientation. They consist of stochastic functions that couple the curvatures of two nanosized segments, symmetrically placed on the DNA contour. We show that the fine mapping of the ensemble-averaged functions along the molecular backbone generates characteristic patterns of variation that highlight all pairs of tracts with large intrinsic curvature or enhanced flexibility. We demonstrate the practical applicability of the method for DNA chains imaged by atomic force microscopy. Our approach paves the way for the label-free comparative analysis of duplexes, aimed to detect nanoscale conformational changes of physical or biological relevance in large sample numbers. PMID:25248631
Cosmological models with positive scalar spatial curvature and Λ>0
NASA Astrophysics Data System (ADS)
Ponce de Leon, J.
1987-12-01
Some exact spherically symmetric solutions of the Einstein field equations with Λ>0 and positive three-curvature are given. They have reasonable physical properties and represent universes which do not undergo inflation but have a non-de Sitter behaviour for large times. This paper extends some previous results in the literature. Permanent address: Apartado 2816, Caracas 1010-A, Venezuela.
Positivity of Curvature-Squared Corrections in Gravity
NASA Astrophysics Data System (ADS)
Cheung, Clifford; Remmen, Grant N.
2017-02-01
We study the Gauss-Bonnet (GB) term as the leading higher-curvature correction to pure Einstein gravity. Assuming a tree-level ultraviolet completion free of ghosts or tachyons, we prove that the GB term has a nonnegative coefficient in dimensions greater than 4. Our result follows from unitarity of the spectral representation for a general ultraviolet completion of the GB term.
Three-dimensional ultrasound palmprint recognition using curvature methods
NASA Astrophysics Data System (ADS)
Iula, Antonio; Nardiello, Donatella
2016-05-01
Palmprint recognition systems that use three-dimensional (3-D) information of the palm surface are the most recently explored techniques to overcome some two-dimensional palmprint difficulties. These techniques are based on light structural imaging. In this work, a 3-D ultrasound palmprint recognition system is proposed and evaluated. Volumetric images of a region of the human hand are obtained by moving an ultrasound linear array along its elevation direction and one by one acquiring a number of B-mode images, which are then grouped in a 3-D matrix. The acquisition time was contained in about 5 s. Much information that can be exploited for 3-D palmprint recognition is extracted from the ultrasound volumetric images, including palm curvature and other under-skin information as the depth of the various traits. The recognition procedure developed in this work is based on the analysis of the principal curvatures of palm surface, i.e., mean curvature image, Gaussian curvature image, and surface type. The proposed method is evaluated by performing verification and identification experiments. Preliminary results have shown that the proposed system exhibits an acceptable recognition rate. Further possible improvements of the proposed technique are finally highlighted and discussed.
On the Surprising Salience of Curvature in Grouping by Proximity
ERIC Educational Resources Information Center
Strother, Lars; Kubovy, Michael
2006-01-01
The authors conducted 3 experiments to explore the roles of curvature, density, and relative proximity in the perceptual organization of ambiguous dot patterns. To this end, they developed a new family of regular dot patterns that tend to be perceptually grouped into parallel contours, dot-sampled structured grids (DSGs). DSGs are similar to the…
The driving forces of membrane remodeling by non-intrinsically curved proteins
NASA Astrophysics Data System (ADS)
Ryan, Christopher J.; Stachowiak, Jeanne C.; Schmid, Eva M.; Fletcher, Daniel A.; Geissler, Phillip L.
2011-03-01
Membranes are dynamically remodeled during numerous processes essential to cells. Among the most well-studied effectors of this remodeling are BAR family proteins, which are small and have a banana-like intrinsic curvature that senses, forms, and stabilizes curved membranes without expending energy as ATP or GTP. Recent experiments in reduced systems have shown, however, that small proteins that feature no such intrinsic curvature can similarly cluster at and dramatically remodel membranes. These proteins have no distinguishing features other than their size and their membrane-binding sites, and the dominant effect that is driving curvature is not well understood. Here, we present a coarse-grained simulation study that captures protein steric and binding effects as well as membrane fluctuations at large scales. We use this model to systematically test for the role that such attributes play in the resulting dynamics and equilibrium structures of remodeling processes that feature this motif.
Patients' preferences for information
Kindelan, K.; Kent, G.
1986-01-01
In a study of patients' views of the type of information they would like to receive from the doctor 265 patients from four general practices were given a list of five areas of information — diagnosis, prognosis, treatment, aetiology and social effects of their illness — and asked to rank these in order of importance for that visit. In general, information on diagnosis and prognosis was the most highly valued, while the ways the illness would affect daily activities was the least preferred. Although information on treatment was rarely selected as the first preference it was often the second or third preference. Conversely, diagnosis was the first choice of the largest proportion of patients and the least valued information for 26%. PMID:3440990
Anionic lipids and the maintenance of membrane electrostatics in eukaryotes
Platre, Matthieu Pierre
2017-01-01
ABSTRACT A wide range of signaling processes occurs at the cell surface through the reversible association of proteins from the cytosol to the plasma membrane. Some low abundant lipids are enriched at the membrane of specific compartments and thereby contribute to the identity of cell organelles by acting as biochemical landmarks. Lipids also influence membrane biophysical properties, which emerge as an important feature in specifying cellular territories. Such parameters are crucial for signal transduction and include lipid packing, membrane curvature and electrostatics. In particular, membrane electrostatics specifies the identity of the plasma membrane inner leaflet. Membrane surface charges are carried by anionic phospholipids, however the exact nature of the lipid(s) that powers the plasma membrane electrostatic field varies among eukaryotes and has been hotly debated during the last decade. Herein, we discuss the role of anionic lipids in setting up plasma membrane electrostatics and we compare similarities and differences that were found in different eukaryotic cells. PMID:28102755
Stimulation of root elongation and curvature by calcium.
Takahashi, H; Scott, T K; Suge, H
1992-01-01
Ca2+ has been proposed to mediate inhibition of root elongation. However, exogenous Ca2+ at 10 or 20 millimolar, applied directly to the root cap, significantly stimulated root elongation in pea (Pisum sativum L.) and corn (Zea mays L.) seedlings. Furthermore, Ca2+ at 1 to 20 millimolar, applied unilaterally to the caps of Alaska pea roots, caused root curvature away from the Ca2+ source, which was caused by an acceleration of elongation growth on the convex side (Ca2+ side) of the roots. Roots of an agravitropic pea mutant, ageotropum, responded to a greater extent. Roots of Merit and Silver Queen corn also responded to Ca2+ in similar ways but required a higher Ca2+ concentration than that of pea roots. Roots of all other cultivars tested (additional four cultivars of pea and one of corn) curved away from the unilateral Ca2+ source as well. The Ca(2+)-stimulated curvature was substantially enhanced by light. A Ca2+ ionophore, A23187, at 20 micromolar or abscisic acid at 0.1 to 100 micromolar partially substituted for the light effect and enhanced the Ca(2+)-stimulated curvature in the dark. Unilateral application of Ca2+ to the elongation zone of intact roots or to the cut end of detipped roots caused either no curvature or very slight curvature toward the Ca2+. Thus, Ca2+ action on root elongation differs depending on its site of application. The stimulatory action of Ca2+ may involve an elevation of cytoplasmic Ca2+ in root cap cells and may partipate in root tropisms.
Stimulation of root elongation and curvature by calcium
NASA Technical Reports Server (NTRS)
Takahashi, H.; Scott, T. K.; Suge, H.
1992-01-01
Ca2+ has been proposed to mediate inhibition of root elongation. However, exogenous Ca2+ at 10 or 20 millimolar, applied directly to the root cap, significantly stimulated root elongation in pea (Pisum sativum L.) and corn (Zea mays L.) seedlings. Furthermore, Ca2+ at 1 to 20 millimolar, applied unilaterally to the caps of Alaska pea roots, caused root curvature away from the Ca2+ source, which was caused by an acceleration of elongation growth on the convex side (Ca2+ side) of the roots. Roots of an agravitropic pea mutant, ageotropum, responded to a greater extent. Roots of Merit and Silver Queen corn also responded to Ca2+ in similar ways but required a higher Ca2+ concentration than that of pea roots. Roots of all other cultivars tested (additional four cultivars of pea and one of corn) curved away from the unilateral Ca2+ source as well. The Ca(2+)-stimulated curvature was substantially enhanced by light. A Ca2+ ionophore, A23187, at 20 micromolar or abscisic acid at 0.1 to 100 micromolar partially substituted for the light effect and enhanced the Ca(2+)-stimulated curvature in the dark. Unilateral application of Ca2+ to the elongation zone of intact roots or to the cut end of detipped roots caused either no curvature or very slight curvature toward the Ca2+. Thus, Ca2+ action on root elongation differs depending on its site of application. The stimulatory action of Ca2+ may involve an elevation of cytoplasmic Ca2+ in root cap cells and may partipate in root tropisms.
Membrane-Mediated Interactions Measured Using Membrane Domains
Semrau, Stefan; Idema, Timon; Schmidt, Thomas; Storm, Cornelis
2009-01-01
Abstract Cell membrane organization is the result of the collective effect of many driving forces. Several of these, such as electrostatic and van der Waals forces, have been identified and studied in detail. In this article, we investigate and quantify another force, the interaction between inclusions via deformations of the membrane shape. For electrically neutral systems, this interaction is the dominant organizing force. As a model system to study membrane-mediated interactions, we use phase-separated biomimetic vesicles that exhibit coexistence of liquid-ordered and liquid-disordered lipid domains. The membrane-mediated interactions between these domains lead to a rich variety of effects, including the creation of long-range order and the setting of a preferred domain size. Our findings also apply to the interaction of membrane protein patches, which induce similar membrane shape deformations and hence experience similar interactions. PMID:19527649
Metal Preferences and Metallation*
Foster, Andrew W.; Osman, Deenah; Robinson, Nigel J.
2014-01-01
The metal binding preferences of most metalloproteins do not match their metal requirements. Thus, metallation of an estimated 30% of metalloenzymes is aided by metal delivery systems, with ∼25% acquiring preassembled metal cofactors. The remaining ∼70% are presumed to compete for metals from buffered metal pools. Metallation is further aided by maintaining the relative concentrations of these pools as an inverse function of the stabilities of the respective metal complexes. For example, magnesium enzymes always prefer to bind zinc, and these metals dominate the metalloenzymes without metal delivery systems. Therefore, the buffered concentration of zinc is held at least a million-fold below magnesium inside most cells. PMID:25160626
Cheng, Hui-Ting; London, Erwin
2011-01-01
Asymmetry of inner and outer leaflet lipid composition is an important characteristic of eukaryotic plasma membranes. We previously described a technique in which methyl-β-cyclodextrin-induced lipid exchange is used to prepare biological membrane-like asymmetric small unilamellar vesicles (SUVs). Here, to mimic plasma membranes more closely, we used a lipid-exchange-based method to prepare asymmetric large unilamellar vesicles (LUVs), which have less membrane curvature than SUVs. Asymmetric LUVs in which sphingomyelin (SM) or SM + 1-palmitoyl-2-oleoyl-phosphatidylcholine was exchanged into the outer leaflet of vesicles composed of 1,2-dioleoyl-phosphatidylethanolamine (DOPE) and 1-palmitoyl-2-oleoyl-phosphatidylserine (POPS) were prepared with or without cholesterol. Approximately 80–100% replacement of outer leaflet DOPE and POPS was achieved. At room temperature, SM exchange into the outer leaflet increased the inner leaflet lipid order, suggesting significant interleaflet interaction. However, the SM-rich outer leaflet formed an ordered state, melting with a midpoint at ∼37°C. This was about the same value observed in pure SM vesicles, and was significantly higher than that observed in symmetric vesicles with the same SM content, which melted at ∼20°C. In other words, ordered state formation by outer-leaflet SM in asymmetric vesicles was not destabilized by an inner leaflet composed of DOPE and POPS. These properties suggest that the coupling between the physical states of the outer and inner leaflets in these asymmetric LUVs becomes very weak as the temperature approaches 37°C. Overall, the properties of asymmetric LUVs were very similar to those previously observed in asymmetric SUVs, indicating that they do not arise from the high membrane curvature of asymmetric SUVs. PMID:21641312
Kim, Edward Y.; Briley, Nicole E.; Tyndall, Erin R.; Xu, Jie; Li, Conggang; Ramamurthi, Kumaran S.; Flanagan, John M.; Tian, Fang
2015-01-01
Many essential cellular processes including endocytosis and vesicle trafficking require alteration of membrane geometry. These changes are usually mediated by proteins that can sense and/or induce membrane curvature. Using spherical nanoparticle supported lipid bilayers (SSLBs), we characterize how SpoVM, a bacterial development factor, interacts with differently curved membranes by magic angle spinning solid-state NMR. Our results demonstrate that SSLBs are an effective system for structural and topological studies of membrane geometry-sensitive molecules. PMID:26488086
Mechano-capacitive properties of polarized membranes.
Mosgaard, Lars D; Zecchi, Karis A; Heimburg, Thomas
2015-10-28
Biological membranes are capacitors that can be charged by applying a field across the membrane. The charges on the capacitor exert a force on the membrane that leads to electrostriction, i.e. a thinning of the membrane. Since the force is quadratic in voltage, negative and positive voltage have an identical influence on the physics of symmetric membranes. However, this is not the case for a membrane with an asymmetry leading to a permanent electric polarization. Positive and negative voltages of identical magnitude lead to different properties. Such an asymmetry can originate from a lipid composition that is different on the two monolayers of the membrane, or from membrane curvature. The latter effect is called 'flexoelectricity'. As a consequence of permanent polarization, the membrane capacitor is discharged at a voltage different from zero. This leads to interesting electrical phenomena such as outward or inward rectification of membrane permeability. Here, we introduce a generalized theoretical framework, that treats capacitance, polarization, flexoelectricity, piezoelectricity and thermoelectricity in the same language. We show applications to electrostriction, membrane permeability and piezoelectricity and thermoelectricity close to melting transitions, where such effects are especially pronounced.
Composite oxygen transport membrane
Christie, Gervase Maxwell; Lane, Jonathan A.
2016-11-15
A method of producing a composite oxygen ion membrane and a composite oxygen ion membrane in which a porous fuel oxidation layer and a dense separation layer and optionally, a porous surface exchange layer are formed on a porous support from mixtures of (Ln.sub.1-xA.sub.x).sub.wCr.sub.1-yB.sub.yO.sub.3-.delta. and a doped zirconia. In the porous fuel oxidation layer and the optional porous surface exchange layer, A is Calcium and in the dense separation layer A is not Calcium and, preferably is Strontium. Preferred materials are (La.sub.0.8Ca.sub.0.2).sub.0.95Cr.sub.0.5Mn.sub.0.5O.sub.3-.delta. for the porous fuel oxidation and optional porous surface exchange layers and (La.sub.0.8Sr.sub.0.2).sub.0.95Cr.sub.0.5Fe.sub.0.5O.sub.3-.delta. for the dense separation layer. The use of such materials allows the membrane to sintered in air and without the use of pore formers to reduce membrane manufacturing costs. The use of materials, as described herein, for forming the porous layers have application for forming any type of porous structure, such as a catalyst support.
Composite oxygen transport membrane
Christie, Gervase Maxwell; Lane, Jonathan A.
2014-08-05
A method of producing a composite oxygen ion membrane and a composite oxygen ion membrane in which a porous fuel oxidation layer and a dense separation layer and optionally, a porous surface exchange layer are formed on a porous support from mixtures of (Ln.sub.1-xA.sub.x).sub.wCr.sub.1-yB.sub.yO.sub.3-.delta. and a doped zirconia. In the porous fuel oxidation layer and the optional porous surface exchange layer, A is Calcium and in the dense separation layer A is not Calcium and, preferably is Strontium. Preferred materials are (La.sub.0.8Ca.sub.0.2).sub.0.95Cr.sub.0.5Mn.sub.0.5O.sub.3-.delta. for the porous fuel oxidation and optional porous surface exchange layers and (La.sub.0.8Sr.sub.0.2).sub.0.95Cr.sub.0.5Fe.sub.0.5O.sub.3-.delta. for the dense separation layer. The use of such materials allows the membrane to sintered in air and without the use of pore formers to reduce membrane manufacturing costs. The use of materials, as described herein, for forming the porous layers have application for forming any type of porous structure, such as a catalyst support.
Zhi-Qiang, Chen; Jun-Wen, Li; Yi-Hong, Zhang; Xuan, Wang; Bin, Zhang
2012-01-01
The goal of this study is to investigate the effect of inoculating granules on reducing membrane fouling. In order to evaluate the differences in performance between flocculent sludge and aerobic granular sludge in membrane reactors (MBRs), two reactors were run in parallel and various parameters related to membrane fouling were measured. The results indicated that specific resistance to the fouling layer was five times greater than that of mixed liquor sludge in the granular MBR. The floc sludge more easily formed a compact layer on the membrane surface, and increased membrane resistance. Specifically, the floc sludge had a higher moisture content, extracellular polymeric substances concentration, and negative surface charge. In contrast, aerobic granules could improve structural integrity and strength, which contributed to the preferable permeate performance. Therefore, inoculating aerobic granules in a MBR presents an effective method of reducing the membrane fouling associated with floc sludge the perspective of from the morphological characteristics of microbial aggregates. PMID:22859954
Nonlinear dynamics of a double bilipid membrane.
Sample, C; Golovin, A A
2007-09-01
The nonlinear dynamics of a biological double membrane that consists of two coupled lipid bilayers, typical of some intracellular organelles such as mitochondria or nuclei, is studied. A phenomenological free-energy functional is formulated in which the curvatures of the two parts of the double membrane and the distance between them are coupled to the lipid chemical composition. The derived nonlinear evolution equations for the double-membrane dynamics are studied analytically and numerically. A linear stability analysis is performed, and the domains of parameters are found in which the double membrane is stable. For the parameter values corresponding to an unstable membrane, numerical simulations are performed that reveal various types of complex dynamics, including the formation of stationary, spatially periodic patterns.
Electrokinetic effects near a membrane
NASA Astrophysics Data System (ADS)
Lacoste, David
2009-03-01
We discuss the electrostatic and electrokinetic contribution to the elastic moduli of a cell or artificial membrane placed in an electrolyte and driven by a DC electric field. The field drives ion currents across the membrane, through specific channels, pumps or natural pores. In steady state, charges accumulate in the Debye layers close to the membrane, modifying the membrane elastic moduli. We first study a model of a membrane of zero thickness, later generalizing this treatment to allow for a finite thickness and finite dielectric constant. Our results clarify and extend the results presented in [D. Lacoste, M. Cosentino Lagomarsino, and J. F. Joanny, Europhys. Lett., 77, 18006 (2007)], by providing a physical explanation for a destabilizing term proportional to kps^3 in the fluctuation spectrum, which we relate to a nonlinear (E^2) electro-kinetic effect called induced-charge electro-osmosis (ICEO). Recent studies of ICEO have focused on electrodes and polarizable particles, where an applied bulk field is perturbed by capacitive charging of the double layer and drives flow along the field axis toward surface protrusions; we predict similar ICEO flows around driven membranes, due to curvature-induced tangential fields within a non-equilibrium double layer, which hydrodynamically enhance protrusions.
Mingenbach, W.A.
1988-02-09
A device is provided for stabilizing a flexible membrane secured within a frame, wherein a plurality of elongated arms are disposed radially from a central hub which penetrates the membrane, said arms imposing alternately against opposite sides of the membrane, thus warping and tensioning the membrane into a condition of improved stability. The membrane may be an opaque or translucent sheet or other material. 10 figs.
Curvature-Induced Asymmetric Spin-Wave Dispersion
NASA Astrophysics Data System (ADS)
Otálora, Jorge A.; Yan, Ming; Schultheiss, Helmut; Hertel, Riccardo; Kákay, Attila
2016-11-01
In magnonics, spin waves are conceived of as electron-charge-free information carriers. Their wave behavior has established them as the key elements to achieve low power consumption, fast operative rates, and good packaging in magnon-based computational technologies. Hence, knowing alternative ways that reveal certain properties of their undulatory motion is an important task. Here, we show using micromagnetic simulations and analytical calculations that spin-wave propagation in ferromagnetic nanotubes is fundamentally different than in thin films. The dispersion relation is asymmetric regarding the sign of the wave vector. It is a purely curvature-induced effect and its fundamental origin is identified to be the classical dipole-dipole interaction. The analytical expression of the dispersion relation has the same mathematical form as in thin films with the Dzyalonshiinsky-Moriya interaction. Therefore, this curvature-induced effect can be seen as a "dipole-induced Dzyalonshiinsky-Moriya-like" effect.
Cam radius of curvature modification for improved manufacturability
Doughty, S.
1995-12-31
The design of IC engine cams using the popular polynomial design techniques often results in very high accelerations (and associated high contact forces) as the follower approaches the base circle. In those same parts of the cam action, the cam radius of curvature is likely to change signs, going from convex to concave, and this leads to manufacturing difficulties. When the cam is concave, the radius of the grinding wheel that can be used in manufacture is controlled by the minimum concave radius of curvature of the cam, and this is often much smaller than the wheel size that would result in most economic production. Further, the arc of contact is extended, resulting in loss of coolant flow and rapid loss of wheel dress. A solution is presented, based on substituting a convex circular arc to replace a segment of the cam profile including the concavity. The ramifications of such a modification with regard to the follower motion is also presented.
Glauber theory and the quantum coherence of curvature inhomogeneities
NASA Astrophysics Data System (ADS)
Giovannini, Massimo
2017-02-01
The curvature inhomogeneities are systematically scrutinized in the framework of the Glauber approach. The amplified quantum fluctuations of the scalar and tensor modes of the geometry are shown to be first-order coherent while the interference of the corresponding intensities is larger than in the case of Bose–Einstein correlations. After showing that the degree of second-order coherence does not suffice to characterize unambiguously the curvature inhomogeneities, we argue that direct analyses of the degrees of third- and fourth-order coherence are necessary to discriminate between different correlated states and to infer more reliably the statistical properties of the large-scale fluctuations. We speculate that the moments of the multiplicity distributions of the relic phonons might be observationally accessible thanks to new generations of instruments able to count the single photons of the Cosmic Microwave Background in the THz region.
NASA Astrophysics Data System (ADS)
Reeves, Matthew; Stratford, Kevin; Thijssen, Job H. J.
Bicontinuous Pickering emulsions (bijels) are a physically interesting class of soft materials with many potential applications including catalysis, microfluidics and tissue engineering. They are created by arresting the spinodal decomposition of a partially-miscible liquid with a (jammed) layer of interfacial colloids. Porosity $L$ (average interfacial separation) of the bijel is controlled by varying the radius ($r$) and volume fraction ($\\phi$) of the colloids ($L \\propto r/\\phi$). However, to optimize the bijel structure with respect to other parameters, e.g. quench rate, characterizing by $L$ alone is insufficient. Hence, we have used confocal microscopy and X-ray CT to characterize a range of bijels in terms of local and area-averaged interfacial curvatures. In addition, the curvatures of bijels have been monitored as a function of time, which has revealed an intriguing evolution up to 60 minutes after bijel formation, contrary to previous understanding.
Robust contour decomposition using a constant curvature criterion
NASA Technical Reports Server (NTRS)
Wuescher, Daniel M.; Boyer, Kim L.
1991-01-01
The problem of decomposing an extended boundary or contour into simple primitives is addressed with particular emphasis on Laplacian-of-Gaussian (LoG) zero-crossing contours. A technique is introduced for partitioning such contours into constant curvature segments. A nonlinear `blip' filter matched to the impairment signature of the curvature computation process, an overlapped voting scheme, and a sequential contiguous segment extraction mechanism are used. This technique is insensitive to reasonable changes in algorithm parameters and robust to noise and minor viewpoint-induced distortions in the contour shape, such as those encountered between stereo image pairs. The results vary smoothly with the data, and local perturbations induce only local changes in the result. Robustness and insensitivity are experimentally verified.
Couple sex therapy for dysfunctions associated with congenital penile curvature.
Zukerman, Z; Goldberg, I; Neri, A; Ovadia, J
1988-05-01
Three couples presented to our clinic with congenital ventral curvature of the penis resulting in unconsummated marriage in 2 cases and dyspareunia in 1. Intensive sex therapy was initiated, including use of vaginal dilators for vaginismus and dyspareunia, sex education, sensate focus exercises, and sexual techniques and methods to increase communication. Two highly motivated couples succeeded in having painless, normal, pleasurable sexual relations after short-term sex therapy. The problems of couple 3 were compounded by the wife's admitted lesbianism. However, this patient insisted on corrective surgery for her husband but she divorced him shortly thereafter. This nonsurgical approach for the treatment of sexual dysfunction secondary to penile curvature appears to be effective in selected cases. When corrective surgery is undertaken sex therapy is recommended to reinforce the operative results.
Curvature effects in carbon nanomaterials: Exohedral versus endohedral supercapacitors
Huang, Jingsong; Sumpter, Bobby G; Meunier, Vincent; Gogotsi, Yury G.; Yushin, Gleb; Portet, Cristelle
2010-01-01
Capacitive energy storage mechanisms in nanoporous carbon supercapacitors hinge on endohedral interactions in carbon materials with macro-, meso-, and micropores that have negative surface curvature. In this article, we show that because of the positive curvature found in zero-dimensional carbon onions or one-dimensional carbon nanotube arrays, exohedral interactions cause the normalized capacitance to increase with decreasing particle size or tube diameter, in sharp contrast to the behavior of nanoporous carbon materials. This finding is in good agreement with the trend of recent experimental data. Our analysis suggests that electrical energy storage can be improved by exploiting the highly curved surfaces of carbon nanotube arrays with diameters on the order of 1 nm.
Curvature effects on carbon nanomaterials: Exohedral versus endhohedral supercapacitors
Huang, J; Sumpter, B. G.; Meunier, V.; Yushin, G.; Portet, C.; Gogotsi, Y.
2011-01-31
Capacitive energy storage mechanisms in nanoporous carbon supercapacitors hinge on endohedral interactions in carbon materials with macro-, meso-, and micropores that have negative surface curvature. In this article, we show that because of the positive curvature found in zero-dimensional carbon onions or one-dimensional carbon nanotube arrays, exohedral interactions cause the normalized capacitance to increase with decreasing particle size or tube diameter, in sharp contrast to the behavior of nanoporous carbon materials. This finding is in good agreement with the trend of recent experimental data. Our analysis suggests that electrical energy storage can be improved by exploiting the highly curved surfaces of carbon nanotube arrays with diameters on the order of 1 nm.
Distorted Plane Waves on Manifolds of Nonpositive Curvature
NASA Astrophysics Data System (ADS)
Ingremeau, Maxime
2017-03-01
We will consider the high frequency behaviour of distorted plane waves on manifolds of nonpositive curvature which are Euclidean or hyperbolic near infinity, under the assumption that the curvature is negative close to the trapped set of the geodesic flow and that the topological pressure associated to half the unstable Jacobian is negative. We obtain a precise expression for distorted plane waves in the high frequency limit, similar to the one in Guillarmou and Naud (Am J Math 136:445-479, 2014) in the case of convex co-compact manifolds. In particular, we will show {L_{loc}^∞} bounds on distorted plane waves that are uniform with frequency. We will also show a small-scale equidistribution result for the real part of distorted plane waves, which implies sharp bounds for the volume of their nodal sets.
Effect of curvature on three-dimensional boundary layer stability
NASA Technical Reports Server (NTRS)
Malik, M. R.; Poll, D. I. A.
1984-01-01
The problem of the stability of a three-dimensional laminar boundary layer formed on a curved surface is considered. A calculation scheme, which takes account of the curvature of the flow streamlines and of the surface is proposed for the prediction of the development of small amplitude temporal disturbances. Computations have been performed for the flow over the windward face of an infinitely long yawed cylinder and comparisons have been made with experimental data. These indicate that the theory correctly predicts many of the features of the unstable laminar flow. The theory also suggests that transition, in this particular situation, is dominated by traveling disturbance waves and that, at the experimentally observed transition location, the wave which has undergone greatest total amplification has an amplitude ratio of approximately e to the 11th. When the effects of curvature are omitted the maximum amplitude ratio at transition is about e to the 17th.
Constructing Graphs over with Small Prescribed Mean-Curvature
NASA Astrophysics Data System (ADS)
Carley, Holly; Kiessling, Michael K.-H.
2015-12-01
In this paper nonlinear Hodge theory and Banach algebra estimates are employed to construct a convergent series expansion which solves the prescribed mean curvature equation for n-dimensional hypersurfaces in (+ sign) and (- sign) which are graphs of a smooth function , and whose mean curvature function H is α-Hölder continuous and integrable, with small norm. The radius of convergence is estimated explicitly from below. Our approach is inspired by, and applied to, the Maxwell-Born-Infeld theory of electromagnetism in , for which our method yields the first systematic way of explicitly computing the electrostatic potential for regular charge densities and small Born parameter, with explicit error estimates at any order of truncation of the series. In particular, our results level the ground for a controlled computation of Born-Infeld effects on the Hydrogen spectrum.
Generating ekpyrotic curvature perturbations before the big bang
Lehners, Jean-Luc; Turok, Neil; McFadden, Paul; Steinhardt, Paul J.
2007-11-15
We analyze a general mechanism for producing a nearly scale-invariant spectrum of cosmological curvature perturbations during a contracting phase preceding a big bang, which can be entirely described using 4D effective field theory. The mechanism, based on first producing entropic perturbations and then converting them to curvature perturbations, can be naturally incorporated in cyclic and ekpyrotic models in which the big bang is modeled as a brane collision, as well as other types of cosmological models with a pre-big bang phase. We show that the correct perturbation amplitude can be obtained and that the spectral tilt n{sub s} tends to range from slightly blue to red, with 0.97
CURVATURE-DRIFT INSTABILITY FAILS TO GENERATE PULSAR RADIO EMISSION
Kaganovich, Alexander; Lyubarsky, Yuri
2010-10-01
The curvature-drift instability has long been considered as a viable mechanism for pulsar radio emission. We reconsidered this mechanism by finding an explicit solution describing the propagation of short electromagnetic waves in a plasma flow along curved magnetic field lines. We show that even though the waves could be amplified, the amplification factor remains very close to unity; therefore, this mechanism is unable to generate high brightness temperature emission from initial weak fluctuations.
Novel Topological Phase with a Zero Berry Curvature
NASA Astrophysics Data System (ADS)
Liu, Feng; Wakabayashi, Katsunori
2017-02-01
We present a two-dimensional (2D) lattice model that exhibits a nontrivial topological phase in the absence of the Berry curvature. Instead, the Berry connection provides the topological nontrivial phase in the model, whose integration over the momentum space, the so-called 2D Zak phase, yields a fractional wave polarization in each direction. These fractional wave polarizations manifest themselves as degenerated edge states with opposite parities in the model.
Global and local curvature in density functional theory
NASA Astrophysics Data System (ADS)
Zhao, Qing; Ioannidis, Efthymios I.; Kulik, Heather J.
2016-08-01
Piecewise linearity of the energy with respect to fractional electron removal or addition is a requirement of an electronic structure method that necessitates the presence of a derivative discontinuity at integer electron occupation. Semi-local exchange-correlation (xc) approximations within density functional theory (DFT) fail to reproduce this behavior, giving rise to deviations from linearity with a convex global curvature that is evidence of many-electron, self-interaction error and electron delocalization. Popular functional tuning strategies focus on reproducing piecewise linearity, especially to improve predictions of optical properties. In a divergent approach, Hubbard U-augmented DFT (i.e., DFT+U) treats self-interaction errors by reducing the local curvature of the energy with respect to electron removal or addition from one localized subshell to the surrounding system. Although it has been suggested that DFT+U should simultaneously alleviate global and local curvature in the atomic limit, no detailed study on real systems has been carried out to probe the validity of this statement. In this work, we show when DFT+U should minimize deviations from linearity and demonstrate that a "+U" correction will never worsen the deviation from linearity of the underlying xc approximation. However, we explain varying degrees of efficiency of the approach over 27 octahedral transition metal complexes with respect to transition metal (Sc-Cu) and ligand strength (CO, NH3, and H2O) and investigate select pathological cases where the delocalization error is invisible to DFT+U within an atomic projection framework. Finally, we demonstrate that the global and local curvatures represent different quantities that show opposing behavior with increasing ligand field strength, and we identify where these two may still coincide.
Higher Curvature Effects in the ADD and RS Models
Rizzo, Thomas G.; /SLAC
2006-07-05
Over the last few years several extra-dimensional models have been introduced in attempt to deal with the hierarchy problem. These models can lead to rather unique and spectacular signatures at Terascale colliders such as the LHC and ILC. The ADD and RS models, though quite distinct, have many common feature including a constant curvature bulk, localized Standard Model(SM) fields and the assumption of the validity of the EH action as a description of gravitational interactions.
Abdus Salam and quadratic curvature gravity: Classical solutions
NASA Astrophysics Data System (ADS)
Stelle, K. S.
2017-03-01
In 1978, Salam and Strathdee suggested on the basis of Froissart boundedness that curvature-squared terms should be included in the gravitational Lagrangian. Despite the presence of ghosts in such theories, the subject has remained a persistent topic in approaches to quantum gravity and cosmology. In this article, the space of spherically symmetric solutions to such theories is explored, highlighting horizonless solutions, wormholes and non-Schwarzschild black holes.
Curvature wavefront sensing for the large synoptic survey telescope.
Xin, Bo; Claver, Chuck; Liang, Ming; Chandrasekharan, Srinivasan; Angeli, George; Shipsey, Ian
2015-10-20
The Large Synoptic Survey Telescope (LSST) will use an active optics system (AOS) to maintain alignment and surface figure on its three large mirrors. Corrective actions fed to the LSST AOS are determined from information derived from four curvature wavefront sensors located at the corners of the focal plane. Each wavefront sensor is a split detector such that the halves are 1 mm on either side of focus. In this paper, we describe the extensions to published curvature wavefront sensing algorithms needed to address challenges presented by the LSST, namely the large central obscuration, the fast f/1.23 beam, off-axis pupil distortions, and vignetting at the sensor locations. We also describe corrections needed for the split sensors and the effects from the angular separation of different stars providing the intrafocal and extrafocal images. Lastly, we present simulations that demonstrate convergence, linearity, and negligible noise when compared to atmospheric effects when the algorithm extensions are applied to the LSST optical system. The algorithm extensions reported here are generic and can easily be adapted to other wide-field optical systems including similar telescopes with large central obscuration and off-axis curvature sensing.
Stress-induced curvature engineering in surface-micromachined devices
NASA Astrophysics Data System (ADS)
Aksyuk, Vladimir A.; Pardo, Flavio; Bishop, David J.
1999-03-01
Residual stress and stress gradients play an important role in determining equilibrium shape and behavior of various Si surface-micromachined devices under applied loads. This is particularly true for system having large-area plates and long beams where curvature resulting from stress can lead to significant deviations from stress-free shape. To gain better understanding of these properties, we have measured the equilibrium shapes of various structures built on the MCNC MUMPs using an interferometric profiler. The structures were square plates and long beams composed of various combinations of polysilicon an oxide layers. Some of the structures had additional MUMPs metal layer on top, while on others in-house chromium-gold stacks of varying thickness have been deposited. Temperature dependence of the curvature was measured for some plates. We have used these data in conjunction with simple models to significantly improve the performance of our micromachined devices. While for some structures such as large area reflectors the curvature had to be minimized, it could be advantageously exploited by others, for example vertical actuators for self-assembly.
Instability in bacterial populations and the curvature tensor
NASA Astrophysics Data System (ADS)
Melgarejo, Augusto; Langoni, Laura; Ruscitti, Claudia
2016-09-01
In the geometry associated with equilibrium thermodynamics the scalar curvature Rs is a measure of the volume of correlation, and therefore the singularities of Rs indicates the system instabilities. We explore the use of a similar approach to study instabilities in non-equilibrium systems and we choose as a test example, a colony of bacteria. In this regard we follow the proposal made by Obata et al. of using the curvature tensor for studying system instabilities. Bacterial colonies are often found in nature in concentrated biofilms, or other colony types, which can grow into spectacular patterns visible under the microscope. For instance, it is known that a decrease of bacterial motility with density can promote separation into bulk phases of two coexisting densities; this is opposed to the logistic law for birth and death that allows only a single uniform density to be stable. Although this homogeneous configuration is stable in the absence of bacterial interactions, without logistic growth, a density-dependent swim speed v(ρ) leads to phase separation via a spinodal instability. Thus we relate the singularities in the curvature tensor R to the spinodal instability, that is the appearance of regions of different densities of bacteria.
Encoding Gaussian curvature in glassy and elastomeric liquid crystal solids
Mostajeran, Cyrus; Ware, Taylor H.; White, Timothy J.
2016-01-01
We describe shape transitions of thin, solid nematic sheets with smooth, preprogrammed, in-plane director fields patterned across the surface causing spatially inhomogeneous local deformations. A metric description of the local deformations is used to study the intrinsic geometry of the resulting surfaces upon exposure to stimuli such as light and heat. We highlight specific patterns that encode constant Gaussian curvature of prescribed sign and magnitude. We present the first experimental results for such programmed solids, and they qualitatively support theory for both positive and negative Gaussian curvature morphing from flat sheets on stimulation by light or heat. We review logarithmic spiral patterns that generate cone/anti-cone surfaces, and introduce spiral director fields that encode non-localized positive and negative Gaussian curvature on punctured discs, including spherical caps and spherical spindles. Conditions are derived where these cap-like, photomechanically responsive regions can be anchored in inert substrates by designing solutions that ensure compatibility with the geometric constraints imposed by the surrounding media. This integration of such materials is a precondition for their exploitation in new devices. Finally, we consider the radial extension of such director fields to larger sheets using nematic textures defined on annular domains. PMID:27279777
On the scalar curvature for the noncommutative four torus
NASA Astrophysics Data System (ADS)
Fathizadeh, Farzad
2015-06-01
The scalar curvature for noncommutative four tori TΘ 4 , where their flat geometries are conformally perturbed by a Weyl factor, is computed by making the use of a noncommutative residue that involves integration over the 3-sphere. This method is more convenient since it does not require the rearrangement lemma and it is advantageous as it explains the simplicity of the final functions of one and two variables, which describe the curvature with the help of a modular automorphism. In particular, it readily allows to write the function of two variables as the sum of a finite difference and a finite product of the one variable function. The curvature formula is simplified for dilatons of the form sp, where s is a real parameter and p ∈ C ∞ ( TΘ 4 ) is an arbitrary projection, and it is observed that, in contrast to the two dimensional case studied by Connes and Moscovici, J. Am. Math. Soc. 27(3), 639-684 (2014), unbounded functions of the parameter s appear in the final formula. An explicit formula for the gradient of the analog of the Einstein-Hilbert action is also calculated.
Isolating Curvature Effects in Computing Wall-Bounded Turbulent Flows
NASA Technical Reports Server (NTRS)
Rumsey, Christopher L.; Gatski, Thomas B.
2001-01-01
The flow over the zero-pressure-gradient So-Mellor convex curved wall is simulated using the Navier-Stokes equations. An inviscid effective outer wall shape, undocumented in the experiment, is obtained by using an adjoint optimization method with the desired pressure distribution on the inner wall as the cost function. Using this wall shape with a Navier-Stokes method, the abilities of various turbulence models to simulate the effects of curvature without the complicating factor of streamwise pressure gradient can be evaluated. The one-equation Spalart-Allmaras turbulence model overpredicts eddy viscosity, and its boundary layer profiles are too full. A curvature-corrected version of this model improves results, which are sensitive to the choice of a particular constant. An explicit algebraic stress model does a reasonable job predicting this flow field. However, results can be slightly improved by modifying the assumption on anisotropy equilibrium in the model's derivation. The resulting curvature-corrected explicit algebraic stress model possesses no heuristic functions or additional constants. It lowers slightly the computed skin friction coefficient and the turbulent stress levels for this case (in better agreement with experiment), but the effect on computed velocity profiles is very small.
Generic properties of curvature sensing through vision and touch.
Dresp-Langley, Birgitta
2013-01-01
Generic properties of curvature representations formed on the basis of vision and touch were examined as a function of mathematical properties of curved objects. Virtual representations of the curves were shown on a computer screen for visual scaling by sighted observers (experiment 1). Their physical counterparts were placed in the two hands of blindfolded and congenitally blind observers for tactile scaling. The psychophysical data show that curvature representations in congenitally blind individuals, who never had any visual experience, and in sighted observers, who rely on vision most of the time, are statistically linked to the same mathematical properties of the curves. The perceived magnitude of object curvature, sensed through either vision or touch, is related by a mathematical power law, with similar exponents for the two sensory modalities, to the aspect ratio of the curves, a scale invariant geometric property. This finding supports biologically motivated models of sensory integration suggesting a universal power law for the adaptive brain control and balance of motor responses to environmental stimuli from any sensory modality.
(Curvature) 2-terms for supergravity in three dimensions
NASA Astrophysics Data System (ADS)
Nishino, Hitoshi; Rajpoot, Subhash
2006-08-01
We investigate the effect of (curvature)2-terms on N = 1 and N = 2 supergravity in three dimensions. We use the off-shell component fields (meμ ,ψμ , S) for N = 1 and (meμ ,ψμ ,ψμ∗ ,Aμ , B ,B∗) for N = 2 supergravity. The S ,Aμ and B are respectively a real scalar, a real vector and a complex scalar auxiliary fields. Both for N = 1 and N = 2, only two invariant actions for (curvature)2-terms exist, while only the actions with (scalar curvature)2 are free of negative energy ghosts. Interestingly, the originally non-physical graviton and gravitino fields start propagating, together with the scalar field S for the N = 1 case, or the complex scalar B and the longitudinal component ∂μAμ for N = 2. These new propagating fields form two new physical massive supermultiplets of spins (1/2 , 0) with 2 × (1 + 1) degrees of freedom for the N = 1 case, and two physical massive N = 2 supermultiplets of spins (1/2 ,1/2 , 0 , 0) with 2 × (2 + 2) degrees of freedom for the N = 2 case.
Voronoi-Based Curvature and Feature Estimation from Point Clouds.
Mérigot, Quentin; Ovsjanikov, Maks; Guibas, Leonidas
2011-06-01
We present an efficient and robust method for extracting curvature information, sharp features, and normal directions of a piecewise smooth surface from its point cloud sampling in a unified framework. Our method is integral in nature and uses convolved covariance matrices of Voronoi cells of the point cloud which makes it provably robust in the presence of noise. We show that these matrices contain information related to curvature in the smooth parts of the surface, and information about the directions and angles of sharp edges around the features of a piecewise-smooth surface. Our method is applicable in both two and three dimensions, and can be easily parallelized, making it possible to process arbitrarily large point clouds, which was a challenge for Voronoi-based methods. In addition, we describe a Monte-Carlo version of our method, which is applicable in any dimension. We illustrate the correctness of both principal curvature information and feature extraction in the presence of varying levels of noise and sampling density on a variety of models. As a sample application, we use our feature detection method to segment point cloud samplings of piecewise-smooth surfaces.
Finger vein extraction using gradient normalization and principal curvature
NASA Astrophysics Data System (ADS)
Choi, Joon Hwan; Song, Wonseok; Kim, Taejeong; Lee, Seung-Rae; Kim, Hee Chan
2009-02-01
Finger vein authentication is a personal identification technology using finger vein images acquired by infrared imaging. It is one of the newest technologies in biometrics. Its main advantage over other biometrics is the low risk of forgery or theft, due to the fact that finger veins are not normally visible to others. Extracting finger vein patterns from infrared images is the most difficult part in finger vein authentication. Uneven illumination, varying tissues and bones, and changes in the physical conditions and the blood flow make the thickness and brightness of the same vein different in each acquisition. Accordingly, extracting finger veins at their accurate positions regardless of their thickness and brightness is necessary for accurate personal identification. For this purpose, we propose a new finger vein extraction method which is composed of gradient normalization, principal curvature calculation, and binarization. As local brightness variation has little effect on the curvature and as gradient normalization makes the curvature fairly uniform at vein pixels, our method effectively extracts finger vein patterns regardless of the vein thickness or brightness. In our experiment, the proposed method showed notable improvement as compared with the existing methods.
Effect of Interface Curvature on Super-Hydrophobic Drag Reduction
NASA Astrophysics Data System (ADS)
Rastegari, Amirreza; Akhavan, Rayhaneh
2015-11-01
The effect of interface curvature on Super-Hydrophobic (SH) Drag Reduction (DR) has been investigated using DNS with lattice Boltzmann methods in laminar (Rebulk = 50) and turbulent (Rebulk = 3600 , Reτ0 ~ 223) channel flows. SH surfaces with longitudinal arrays of micro-grooves (MG) of size 0 . 1 <= g / h <= 0 . 47 & g / w = 1 , 7 were investigated, where g and w denote the width of the MG and the separation in between them, respectively, and h denotes the channel half-height. The liquid/gas interfaces on the SH MG were modeled as `idealized', stationary, curved, shear-free boundaries, with the interface curvatures determined from the Young-Laplace equation. The presence of interface curvature leads to enhancements of DR by up to 10% in laminar flow, and more modest enhancements or even decreases in DR in turbulent flow, compared to flat, shear-free interfaces. These enhancements or decreases in DR, relative to flat, shear-free interfaces, in both laminar and turbulent flow, are shown to arise primarily from the modified shape of the cross section of the channel in the presence of the curved interface.
Coaching preferences of athletes.
Terry, P C; Howe, B L
1984-12-01
The study examined the coaching preferences of 80 male and 80 female athletes, as measured by the Leadership Scale for Sports (Chelladurai and Saleh, 1978, 1980). In addition, it attempted to assess the applicability to sport of the Life-cycle and Path-goal theories of leadership. Comparisons between groups were made on the basis of sex, age, and type of sport. A MANOVA indicated that athletes in independent sports preferred more democratic behaviour (p less than .001) and less autocratic behaviour (p = .028) than athletes in interdependent sports. No differences in coaching preferences were found which could be attributed to the age or sex of the athlete, or the variability of the sports task. These results partially supported the Path-goal theory, but did not support the Life-cycle theory. Athletes of all groups tended to favour coaches who displayed training behaviour and rewarding behaviour "often", democratic behaviour and social support behaviour "occasionally", and autocratic behaviour "seldom". This consistency may be a useful finding for those organizations and institutions interested in preparing coaches.
Fyfe, Ian; Schuh, Amber L; Edwardson, J Michael; Audhya, Anjon
2011-09-30
The scission of membranes necessary for vesicle biogenesis and cytokinesis is mediated by cytoplasmic proteins, which include members of the ESCRT (endosomal sorting complex required for transport) machinery. During the formation of intralumenal vesicles that bud into multivesicular endosomes, the ESCRT-II complex initiates polymerization of ESCRT-III subunits essential for membrane fission. However, mechanisms underlying the spatial and temporal regulation of this process remain unclear. Here, we show that purified ESCRT-II binds to the ESCRT-III subunit Vps20 on chemically defined membranes in a curvature-dependent manner. Using a combination of liposome co-flotation assays, fluorescence-based liposome interaction studies, and high-resolution atomic force microscopy, we found that the interaction between ESCRT-II and Vps20 decreases the affinity of ESCRT-II for flat lipid bilayers. We additionally demonstrate that ESCRT-II and Vps20 nucleate flexible filaments of Vps32 that polymerize specifically along highly curved membranes as a single string of monomers. Strikingly, Vps32 filaments are shown to modulate membrane dynamics in vitro, a prerequisite for membrane scission events in cells. We propose that a curvature-dependent assembly pathway provides the spatial regulation of ESCRT-III to fuse juxtaposed bilayers of elevated curvature.
Membrane bending energy and fusion pore kinetics in Ca(2+)-triggered exocytosis.
Zhang, Zhen; Jackson, Meyer B
2010-06-02
A fusion pore composed of lipid is an obligatory kinetic intermediate of membrane fusion, and its formation requires energy to bend membranes into highly curved shapes. The energetics of such deformations in viral fusion is well established, but the role of membrane bending in Ca(2+)-triggered exocytosis remains largely untested. Amperometry recording showed that during exocytosis in chromaffin and PC12 cells, fusion pores formed by smaller vesicles dilated more rapidly than fusion pores formed by larger vesicles. The logarithm of 1/(fusion pore lifetime) varied linearly with vesicle curvature. The vesicle size dependence of fusion pore lifetime quantitatively accounted for the nonexponential fusion pore lifetime distribution. Experimentally manipulating vesicle size failed to alter the size dependence of fusion pore lifetime. Manipulations of membrane spontaneous curvature altered this dependence, and applying the curvature perturbants to the opposite side of the membrane reversed their effects. These effects of curvature perturbants were opposite to those seen in viral fusion. These results indicate that during Ca(2+)-triggered exocytosis membrane bending opposes fusion pore dilation rather than fusion pore formation. Ca(2+)-triggered exocytosis begins with a proteinaceous fusion pore with less stressed membrane, and becomes lipidic as it dilates, bending membrane into a highly curved shape.
Membrane trafficking: decoding vesicle identity with contrasting chemistries.
Frost, Adam
2011-10-11
Proteins involved in membrane traffic must distinguish between different classes of vesicles. New work now shows that α-synuclein and ALPS motifs represent two extreme types of amphipathic helix that are tuned to detect both the curvature of transport vesicles as well as their bulk lipid content.
The DART Cylindrical, Infrared, 1 Meter Membrane Reflector
NASA Technical Reports Server (NTRS)
Morgan, Rhonda M.; Agnes, Greg S.; Barber, Dan; Dooley, Jennifer; Dragovan, Mark; Hatheway, Al E.; Marcin, Marty
2004-01-01
The Dual Anamorphic Reflector Telescopes (DART) is an architecture for large aperture space telescopes that enables the use of membranes. A membrane can be readily shaped in one direction of curvature using a combination of boundary control and tensioning, yielding a cylindrical reflector. Two cylindrical reflectors (orthogonal and confocal) comprise the 'primary mirror' of the telescope system. The aperture is completely unobstructed and ideal for infrared and high contrast observations.
The Vocational Preference Inventory Scores and Environmental Preferences
ERIC Educational Resources Information Center
Kunce, Joseph T.; Kappes, Bruno Maurice
1976-01-01
This study investigated the relationship between vocational interest measured by the Vocational Preference Inventory (VPI) and preferences of 175 undergraduates for structured or unstructured environments. Males having clear-cut preferences for structured situations had significantly higher Realistic-Conventional scores than those without…
Non-Uniform Dispersion of the Source-Sink Relationship Alters Wavefront Curvature
Romero, Lucia; Trenor, Beatriz; Ferrero, Jose M.; Starmer, C. Frank
2013-01-01
The distribution of cellular source-sink relationships plays an important role in cardiac propagation. It can lead to conduction slowing and block as well as wave fractionation. It is of great interest to unravel the mechanisms underlying evolution in wavefront geometry. Our goal is to investigate the role of the source-sink relationship on wavefront geometry using computer simulations. We analyzed the role of variability in the microscopic source-sink relationship in driving changes in wavefront geometry. The electrophysiological activity of a homogeneous isotropic tissue was simulated using the ten Tusscher and Panfilov 2006 action potential model and the source-sink relationship was characterized using an improved version of the Romero et al. safety factor formulation (SFm2). Our simulations reveal that non-uniform dispersion of the cellular source-sink relationship (dispersion along the wavefront) leads to alterations in curvature. To better understand the role of the source-sink relationship in the process of wave formation, the electrophysiological activity at the initiation of excitation waves in a 1D strand was examined and the source-sink relationship was characterized using the two recently updated safety factor formulations: the SFm2 and the Boyle-Vigmond (SFVB) definitions. The electrophysiological activity at the initiation of excitation waves was intimately related to the SFm2 profiles, while the SFVB led to several counterintuitive observations. Importantly, with the SFm2 characterization, a critical source-sink relationship for initiation of excitation waves was identified, which was independent of the size of the electrode of excitation, membrane excitability, or tissue conductivity. In conclusion, our work suggests that non-uniform dispersion of the source-sink relationship alters wavefront curvature and a critical source-sink relationship profile separates wave expansion from collapse. Our study reinforces the idea that the safety factor
Lee, Sang-Mok; Choi, Hyuk Jin; Choi, Heejin; Kim, Mee Kum; Wee, Won Ryang
2016-10-07
BACKGROUND: Though the development and fitting of scleral contact lenses are expanding steadily, there is no simple method to provide scleral metrics for scleral contact lens fitting yet. The aim of this study was to establish formulae for estimation of the axial radius of curvature (ARC) of the anterior sclera using ocular biometric parameters that can be easily obtained with conventional devices.
Membrane Tension Inhibits Deformation by Coat Proteins in Clathrin-Mediated Endocytosis
NASA Astrophysics Data System (ADS)
Hassinger, Julian; Drubin, David; Oster, George; Rangamani, Padmini
2016-02-01
In clathrin-mediated endocytosis (CME), clathrin and various adaptor proteins coat a patch of the plasma membrane, which is reshaped to form a budded vesicle. Experimental studies have demonstrated that elevated membrane tension can inhibit bud formation by a clathrin coat. In this study, we investigate the impact of membrane tension on the mechanics of membrane budding by simulating clathrin coats that either grow in area or progressively induce greater curvature. At low membrane tension, progressively increasing the area of a curvature-generating coat causes the membrane to smoothly evolve from a flat to budded morphology, whereas the membrane remains essentially flat at high membrane tensions. Interestingly, at physiologically relevant, intermediate membrane tensions, the shape evolution of the membrane undergoes a snapthrough instability in which increasing coat area causes the membrane to "snap" from an open, U-shaped bud to a closed, $\\Omega$-shaped bud. This instability is accompanied by a large energy barrier, which could cause a developing endocytic pit to stall if the binding energy of additional coat is insufficient to overcome this barrier. Similar results were found for a coat of constant area in which the spontaneous curvature progressively increases. Additionally, a pulling force on the bud, simulating a force from actin polymerization, is sufficient to drive a transition from an open to closed bud, overcoming the energy barrier opposing this transition.
Separation of metals by supported liquid membranes
Takigawa, D.Y.
1990-12-31
A supported liquid membrane system for the separation of a preselected chemical species within a feedstream, preferably an aqueous feedstream, includes a feed compartment containing a feed solution having at least one preselected chemical species therein, a stripping compartment containing a stripping solution therein, and a microporous polybenzimidazole membrane situated between the compartments, the microporous polybenzimidazole membrane containing an extractant mixture selective for the preselected chemical species within the membrane pores is disclosed along with a method of separating preselected chemical species from a feedstream with such a system, and a supported liquid membrane for use in such a system.
Separation of metals by supported liquid membrane
Takigawa, Doreen Y.
1992-01-01
A supported liquid membrane system for the separation of a preselected chemical species within a feedstream, preferably an aqueous feedstream, includes a feed compartment containing a feed solution having at least one preselected chemical species therein, a stripping compartment containing a stripping solution therein, and a microporous polybenzimidazole membrane situated between the compartments, the microporous polybenzimidazole membrane containing an extractant mixture selective for the preselected chemical species within the membrane pores is disclosed along with a method of separating preselected chemical species from a feedstream with such a system, and a supported liquid membrane for use in such a system.
A novel setup for wafer curvature measurement at very high heating rates
NASA Astrophysics Data System (ADS)
Islam, T.; Zechner, J.; Bernardoni, M.; Nelhiebel, M.; Pippan, R.
2017-02-01
The curvature evolution of a thin film layer stack containing a top Al layer is measured during temperature cycles with very high heating rates. The temperature cycles are generated by means of programmable electrical power pulses applied to miniaturized polysilicon heater systems embedded inside a semiconductor chip and the curvature is measured by a fast wafer curvature measurement setup. Fast temperature cycles with heating duration of 100 ms are created to heat the specimen up to 270 °C providing an average heating rate of 2500 K/s. As a second approach, curvature measurement utilizing laser scanning Doppler vibrometry is also demonstrated which verifies the results obtained from the fast wafer curvature measurement setup. Film stresses calculated from the measured curvature values compare well to literature results, indicating that the new method can be used to measure curvature during fast temperature cycling.
Membrane Mechanics of Endocytosis in Cells with Turgor
Dmitrieff, Serge; Nédélec, François
2015-01-01
Endocytosis is an essential process by which cells internalize a piece of plasma membrane and material from the outside. In cells with turgor, pressure opposes membrane deformations, and increases the amount of force that has to be generated by the endocytic machinery. To determine this force, and calculate the shape of the membrane, we used physical theory to model an elastic surface under pressure. Accurate fits of experimental profiles are obtained assuming that the coated membrane is highly rigid and preferentially curved at the endocytic site. The forces required from the actin machinery peaks at the onset of deformation, indicating that once invagination has been initiated, endocytosis is unlikely to stall before completion. Coat proteins do not lower the initiation force but may affect the process by the curvature they induce. In the presence of isotropic curvature inducers, pulling the tip of the invagination can trigger the formation of a neck at the base of the invagination. Hence direct neck constriction by actin may not be required, while its pulling role is essential. Finally, the theory shows that anisotropic curvature effectors stabilize membrane invaginations, and the loss of crescent-shaped BAR domain proteins such as Rvs167 could therefore trigger membrane scission. PMID:26517669
Membrane Mechanics of Endocytosis in Cells with Turgor.
Dmitrieff, Serge; Nédélec, François
2015-10-01
Endocytosis is an essential process by which cells internalize a piece of plasma membrane and material from the outside. In cells with turgor, pressure opposes membrane deformations, and increases the amount of force that has to be generated by the endocytic machinery. To determine this force, and calculate the shape of the membrane, we used physical theory to model an elastic surface under pressure. Accurate fits of experimental profiles are obtained assuming that the coated membrane is highly rigid and preferentially curved at the endocytic site. The forces required from the actin machinery peaks at the onset of deformation, indicating that once invagination has been initiated, endocytosis is unlikely to stall before completion. Coat proteins do not lower the initiation force but may affect the process by the curvature they induce. In the presence of isotropic curvature inducers, pulling the tip of the invagination can trigger the formation of a neck at the base of the invagination. Hence direct neck constriction by actin may not be required, while its pulling role is essential. Finally, the theory shows that anisotropic curvature effectors stabilize membrane invaginations, and the loss of crescent-shaped BAR domain proteins such as Rvs167 could therefore trigger membrane scission.
Therapeutic Recreation Majors' Work Preference.
ERIC Educational Resources Information Center
Barber, Elizabeth H.; Magafas, Anita
1992-01-01
Investigates the client age/disability work preference of 76 therapeutic recreation undergraduate students at 3 universities. Results indicate a preference to work with younger clients, disability groups, and physically impaired clients. Chronically ill clients were last in work preference. Students need exposure to the benefits of working with…
Shifting Preferences in Pornography Consumption.
ERIC Educational Resources Information Center
Zillmann, Dolf; Bryant, Jennings
1986-01-01
Concludes that subjects with considerable prior exposure to common, nonviolent pornography preferred to watch uncommon pornography. Male nonstudents preferred it almost exclusively, as did male students to a lesser extent. Females also exhibited this consumption preference, though it was far less pronounced, especially in female students. (JD)
NASA Astrophysics Data System (ADS)
Noguchi, Hiroshi
2014-11-01
BAR superfamily proteins have a banana-shaped domain that causes the local bending of lipid membranes. We study as to how such a local anisotropic curvature induces effective interaction between proteins and changes the global shape of vesicles and membrane tubes using meshless membrane simulations. The proteins are modeled as banana-shaped rods strongly adhered to the membrane. Our study reveals that the rods assemble via two continuous directional phase separations unlike a conventional two-dimensional phase separation. As the rod curvature increases, in the membrane tube the rods assemble along the azimuthal direction and subsequently along the longitudinal direction accompanied by shape transformation of the tube. In the vesicle, in addition to these two assembly processes, further increase in the rod curvature induces tubular scaffold formation.
Membrane Composition Variation and Underdamped Mechanics near Transmembrane Proteins and Coats
NASA Astrophysics Data System (ADS)
Rautu, S. Alex; Rowlands, George; Turner, Matthew S.
2015-03-01
We study the effect of transmembrane proteins on the shape, composition, and thermodynamic stability of the surrounding membrane. When the coupling between membrane composition and curvature is strong enough, the nearby membrane composition and shape both undergo a transition from overdamped to underdamped spatial variation, well before the membrane becomes unstable in the bulk. This transition is associated with a change in the sign of the thermodynamic energy and, hence, favors the early stages of coat assembly necessary for vesiculation (budding) and may suppress the activity of mechanosensitive membrane channels and transporters. Our results suggest an approach to obtain physical parameters of the membrane that are otherwise difficult to measure.
Geometric conservation laws for cells or vesicles with membrane nanotubes or singular points.
Yin, Yajun; Yin, Jie
2006-07-12
On the basis of the integral theorems about the mean curvature and Gauss curvature, geometric conservation laws for cells or vesicles are proved. These conservation laws may depict various special bionano structures discovered in experiments, such as the membrane nanotubes and singular points grown from the surfaces of cells or vesicles. Potential applications of the conservation laws to lipid nanotube junctions that interconnect cells or vesicles are discussed.
Computational analysis of local membrane properties
NASA Astrophysics Data System (ADS)
Gapsys, Vytautas; de Groot, Bert L.; Briones, Rodolfo
2013-10-01
In the field of biomolecular simulations, dynamics of phospholipid membranes is of special interest. A number of proteins, including channels, transporters, receptors and short peptides are embedded in lipid bilayers and tightly interact with phospholipids. While the experimental measurements report on the spatial and/or temporal average membrane properties, simulation results are not restricted to the average properties. In the current study, we present a collection of methods for an efficient local membrane property calculation, comprising bilayer thickness, area per lipid, deuterium order parameters, Gaussian and mean curvature. The local membrane property calculation allows for a direct mapping of the membrane features, which subsequently can be used for further analysis and visualization of the processes of interest. The main features of the described methods are highlighted in a number of membrane systems, namely: a pure dimyristoyl-phosphatidyl-choline (DMPC) bilayer, a fusion peptide interacting with a membrane, voltage-dependent anion channel protein embedded in a DMPC bilayer, cholesterol enriched bilayer and a coarse grained simulation of a curved palmitoyl-oleoyl-phosphatidyl-choline lipid membrane. The local membrane property analysis proves to provide an intuitive and detailed view on the observables that are otherwise interpreted as averaged bilayer properties.
Holonomy Attractor Connecting Spaces of Different Curvature Responsible for ``Anomalies''
NASA Astrophysics Data System (ADS)
Binder, Bernd
2009-03-01
In this lecture paper we derive Magic Angle Precession (MAP) from first geometric principles. MAP can arise in situations, where precession is multiply related to spin, linearly by time or distance (dynamic phase, rolling, Gauss law) and transcendentally by the holonomy loop path (geometric phase). With linear spin-precession coupling, gyroscopes can be spun up and down to very high frequencies via low frequency holonomy control induced by external accelerations, which provides for extreme coupling strengths or "anomalies" that can be tested by the powerball or gyrotwister device. Geometrically, a gyroscopic manifold with spherical metric is tangentially aligned to a precession wave channel with conic or hyperbolic metric (like the relativistic Thomas precession). Transporting triangular spin/precession vector relations across the tangential boundary of contact with SO(3) Lorentz symmetry, we get extreme vector currents near the attractor fixed points in precession phase space, where spin currents remain intact while crossing the contact boundaries between regions of different curvature signature (-1, 0, +1). The problem can be geometrically solved by considering a curvature invariant triangular condition, which holds on surfaces with different curvature that are in contact and locally parallel. In this case two out of three angles are identical, whereas the third angle is different due to holonomy. If we require that the side length ratio corresponding to these angles are invariant we get a geodesic chaotic attractor, which is a cosine map cos(x)˜Mx in parameter space providing for fixed points, limit cycle bifurcations, and singularities. The situation could be quite natural and common in the context of vector currents in curved spacetime and gauge theories. MAP could even be part of the electromagnetic interaction, where the electric charge is the geometric U(1) precession spin current and gauge potential with magnetic effects given by extra rotations under the
Nanolaminate Membranes as Cylindrical Telescope Reflectors
NASA Technical Reports Server (NTRS)
Dooley, Jennifer; Dragovan, Mark; Hickey, Gregory; Lih, Shyh-Shiu Lih
2010-01-01
A document discusses a proposal to use axially stretched metal nanolaminate membranes as lightweight parabolic cylindrical reflectors in the Dual Anamorphic Reflector Telescope (DART) - a planned spaceborne telescope in which the cylindrical reflectors would be arranged to obtain a point focus. The discussion brings together a combination of concepts reported separately in several prior NASA Tech Briefs articles, the most relevant being "Nanolaminate Mirrors With Integral Figure-Control Actuators" NPO -30221, Vol. 26, No. 5 (May 2002), page 90; and "Reflectors Made From Membranes Stretched Between Beams" NPO -30571, Vol. 33, No. 10 (October 2009), page 11a. The engineering issues receiving the greatest emphasis in the instant document are (1) the change in curvature associated with the Poisson contraction of a stretched nanolaminate reflector membrane and (2) the feasibility of using patches of poly(vinylidene fluoride) on the rear membrane surface as piezoelectric actuators to correct the surface figure for the effect of Poisson contraction and other shape errors.
Determination of biplane geometry and centerline curvature in vascular imaging
NASA Astrophysics Data System (ADS)
Nazareth, Daryl; Hoffmann, Kenneth R.; Walczak, Alan; Dmochowski, Jacek; Guterman, Lee R.; Rudin, Stephen; Bednarek, Daniel R.
2002-05-01
Three-dimensional (3-D) vessel trees can provide useful visual and quantitative information during interventional procedures. To calculate the 3-D vasculature from biplane images, the transformation relating the imaging systems (i.e., the rotation matrix R and the translation vector t) must be determined. We have developed a technique to calculate these parameters, which requires only the identification of approximately corresponding vessel regions in the two images. Initial estimates of R and t are generated based on the gantry angles, and then refined using an optimization technique. The objective function to be minimized is determined as follows. For each endpoint of each vessel in the first image, an epipolar line in the second image is generated. The intersection points between these two epipolar lines and the corresponding vessel centerline in the second image are determined. The vessel arclength between these intersection points is calculated as a fraction of the entire vessel region length in the image. This procedure is repeated for every vessel in each image. The value of the objective function is calculated from the sum of these fractions, and is smallest when the total fractional arclength is greatest. The 3-D vasculature is obtained from the optimal R and t using triangulation, and vessel curvature is then determined. This technique was evaluated using simulated curves and vessel centerlines obtained from clinical images, and provided rotational, magnification and relative curvature errors of 1 degree(s), 1% and 14% respectively. Accurate 3-D and curvature measures may be useful in clinical decision making, such as in assessing vessel tortuousity and access, during interventional procedures.
An Improved Method to Measure the Cosmic Curvature
NASA Astrophysics Data System (ADS)
Wei, Jun-Jie; Wu, Xue-Feng
2017-04-01
In this paper, we propose an improved model-independent method to constrain the cosmic curvature by combining the most recent Hubble parameter H(z) and supernovae Ia (SNe Ia) data. Based on the H(z) data, we first use the model-independent smoothing technique, Gaussian processes, to construct a distance modulus μ H (z), which is susceptible to the cosmic curvature parameter Ω k . In contrary to previous studies, the light-curve-fitting parameters, which account for the distance estimation of SN (μ SN(z)), are set free to investigate whether Ω k has a dependence on them. By comparing μ H (z) to μ SN(z), we put limits on Ω k . Our results confirm that Ω k is independent of the SN light-curve parameters. Moreover, we show that the measured Ω k is in good agreement with zero cosmic curvature, implying that there is no significant deviation from a flat universe at the current observational data level. We also test the influence of different H(z) samples and different Hubble constant H 0 values, finding that different H(z) samples do not have a significant impact on the constraints. However, different H 0 priors can affect the constraints of Ω k to some degree. The prior of H 0 = 73.24 ± 1.74 km s‑1 Mpc‑1 gives a value of Ω k , a little bit above the 1σ confidence level away from 0, but H 0 = 69.6 ± 0.7 km s‑1 Mpc‑1 gives it below 1σ.
NASA Astrophysics Data System (ADS)
Grandis, S.; Rapetti, D.; Saro, A.; Mohr, J. J.; Dietrich, J. P.
2016-12-01
Recent measurements of the cosmic microwave background (CMB) by the Planck Collaboration have produced arguably the most powerful observational evidence in support of the standard model of cosmology, i.e. the spatially flat ΛCDM paradigm. In this work, we perform model selection tests to examine whether the base CMB temperature and large scale polarization anisotropy data from Planck 2015 (P15; Planck Collaboration XIII) prefer any of eight commonly used one-parameter model extensions with respect to flat ΛCDM. We find a clear preference for models with free curvature, ΩK, or free amplitude of the CMB lensing potential, AL. We also further develop statistical tools to measure tension between data sets. We use a Gaussianization scheme to compute tensions directly from the posterior samples using an entropy-based method, the surprise, as well as a calibrated evidence ratio presented here for the first time. We then proceed to investigate the consistency between the base P15 CMB data and six other CMB and distance data sets. In flat ΛCDM we find a 4.8σ tension between the base P15 CMB data and a distance ladder measurement, whereas the former are consistent with the other data sets. In the curved ΛCDM model we find significant tensions in most of the cases, arising from the well-known low power of the low-ℓ multipoles of the CMB data. In the flat ΛCDM+AL model, however, all data sets are consistent with the base P15 CMB observations except for the CMB lensing measurement, which remains in significant tension. This tension is driven by the increased power of the CMB lensing potential derived from the base P15 CMB constraints in both models, pointing at either potentially unresolved systematic effects or the need for new physics beyond the standard flat ΛCDM model.
Holographic dark energy model from Ricci scalar curvature
Gao Changjun; Wu Fengquan; Chen Xuelei; Shen Yougen
2009-02-15
Motivated by the holographic principle, it has been suggested that the dark energy density may be inversely proportional to the area of the event horizon of the Universe. However, such a model would have a causality problem. In this paper, we propose to replace the future event horizon area with the inverse of the Ricci scalar curvature. We show that this model does not only avoid the causality problem and is phenomenologically viable, but also naturally solves the coincidence problem of dark energy. Our analysis of the evolution of density perturbations show that the matter power spectra and cosmic microwave background temperature anisotropy is only slightly affected by such modification.
Curvature effects on heat transfer in the free jet boundary
Diggs, I.W.; Kim, K.H.
1982-10-01
The Coanda effect, which is known to exist in flows associated with velocity discontinuities around airfoils, may include the effects of high temperature and thermal radiation. A physical interpretation of the steady, two-dimensional incompressible flowfield for such cases, and the boundary conditions which apply, are presented. It is found that the radiative boundary layer displays a sensitivity to curvature that grows more pronounced as Reynolds number value increases. Attention is given to flow behavior for the cases of the predominance of conduction and of radiation.
CURVATURE EFFECT QUANTIFICATION FOR IN-VIVO IR THERMOGRAPHY
Cheng, Tze-Yuan; Deng, Daxiang; Herman, Cila
2013-01-01
Medical Infrared (IR) Imaging has become an important diagnostic tool over recent years. However, one underlying problem in medical diagnostics is associated with accurate quantification of body surface temperatures. This problem is caused by the artifacts induced by the curvature of objects, which leads to inaccurate temperature mapping and biased diagnostic results. Therefore, in our study, an experiment-based analysis is conducted to address the curvature effects toward the 3D temperature reconstruction of the IR thermography image. For quantification purposes, an isothermal copper plate with flat surface, and a cylindrical metal container filled with water are imaged. For the flat surface, the tilting angle measured from camera axis was varied incrementally from 0° to 60 °, such that the effects of surface viewing angle and travel distance on the measured temperature can be explored. On the cylindrical curved surface, the points viewed from 0° to 90° with respect to the camera axis are simultaneously imaged at different temperature levels. The experimental data obtained for the flat surface indicate that both viewing angle and distance effects become noticeable for angles over 40 °. The travel distance contributes a minor change when compared with viewing angle. The experimental results from the curved surface indicate that the curvature effect becomes pronounced when the viewing angle is larger than 60 °. The measurement error on the curved surface is compared with the simulation using the non-dielectric model, and the normalized temperature difference relative to 0° viewing angle was analyzed at six temperature levels. These results indicate that the linear formula associated with directional emissivity is a reasonable approximation for the measurement error, and the normalized error curves change consistently with viewing angle at various temperatures. Therefore, the analysis in this study implies that the directional emissivity based on the non
Inflation, Bifurcations of Nonlinear Curvature Lagrangians and Dark Energy
NASA Astrophysics Data System (ADS)
Mielke, Eckehard W.; Kusmartsev, Fjodor V.; Schunck, Franz E.
2008-09-01
A possible equivalence of scalar dark matter, the inflaton, and modified gravity is analyzed. After a conformal mapping, the dependence of the effective Lagrangian on the curvature is not only singular but also bifurcates into several almost Einsteinian spaces, distinguished only by a different effective gravitational strength and cosmological constant. A swallow tail catastrophe in the bifurcation set indicates the possibility for the coexistence of different Einsteinian domains in our Universe. This 'triple unification' may shed new light on the nature and large scale distribution not only of dark matter but also on 'dark energy', regarded as an effective cosmological constant, and inflation.
A momentum calculation for charged tracks with minute curvature
NASA Astrophysics Data System (ADS)
Treadwell, Elliott
1982-07-01
ADJUST is a calculational method written in A.N.S.I. Fortran IV to correct the momenta of charged tracks with minute radius of curvature and large fractional momentum error [ K<0.0014 (GeV/ c) -1 and Δp/ p⩾0.30]. Single application of the method to straight tracks eliminates remeasurements and avoids creating additional biases against high multiplicity events ( NCH>8 tracks). Although ADJUST originated from the analysis of bubble-chamber events, the method is not restricted to bubble-chamber data.
Closeness to spheres of hypersurfaces with normal curvature bounded below
Borisenko, A A; Drach, K D
2013-11-30
For a Riemannian manifold M{sup n+1} and a compact domain Ω⊂ M{sup n+1} bounded by a hypersurface ∂Ω with normal curvature bounded below, estimates are obtained in terms of the distance from O to ∂Ω for the angle between the geodesic line joining a fixed interior point O in Ω to a point on ∂Ω and the outward normal to the surface. Estimates for the width of a spherical shell containing such a hypersurface are also presented. Bibliography: 9 titles.
On the connectivity of seams of conical intersection: seam curvature.
Yarkony, David R
2005-11-22
The seam of conical intersection of two electronic states is said to be curved when the span of the basis vectors describing the branching plane varies along the seam. In this work degenerate perturbation theory is used to determine an approximately diabatic Hamiltonian that can reliably reproduce the potential-energy surfaces in the vicinity of a point of conical intersection. This Hamiltonian provides a rigorous description of seam curvature, and a means for obtaining the full (N(int)-2)-dimensional seam of conical intersection connected to a point of conical intersection.
Constant mean curvature slicings of Kantowski-Sachs spacetimes
Heinzle, J. Mark
2011-04-15
We investigate existence, uniqueness, and the asymptotic properties of constant mean curvature (CMC) slicings in vacuum Kantowski-Sachs spacetimes with positive cosmological constant. Since these spacetimes violate the strong energy condition, most of the general theorems on CMC slicings do not apply. Although there are in fact Kantowski-Sachs spacetimes with a unique CMC foliation or CMC time function, we prove that there also exist Kantowski-Sachs spacetimes with an arbitrary number of (families of) CMC slicings. The properties of these slicings are analyzed in some detail.
Curvature and geometric modules of noncommutative spheres and tori
Arnlind, Joakim
2014-04-15
When considered as submanifolds of Euclidean space, the Riemannian geometry of the round sphere and the Clifford torus may be formulated in terms of Poisson algebraic expressions involving the embedding coordinates, and a central object is the projection operator, projecting tangent vectors in the ambient space onto the tangent space of the submanifold. In this note, we point out that there exist noncommutative analogues of these projection operators, which implies a very natural definition of noncommutative tangent spaces as particular projective modules. These modules carry an induced connection from Euclidean space, and we compute its scalar curvature.
Direct and alignment-insensitive measurement of cantilever curvature
Hermans, Rodolfo I.; Aeppli, Gabriel; Bailey, Joe M.
2013-07-15
We analytically derive and experimentally demonstrate a method for the simultaneous measurement of deflection for large arrays of cantilevers. The Fresnel diffraction patterns of a cantilever independently reveal tilt, curvature, cubic, and higher order bending of the cantilever. It provides a calibrated absolute measurement of the polynomial coefficients describing the cantilever shape, without careful alignment and could be applied to several cantilevers simultaneously with no added complexity. We show that the method is easily implemented, works in both liquid media and in air, for a broad range of displacements and is especially suited to the requirements for multi-marker biosensors.
Pinkbar is an epithelial-specific BAR domain protein that generates planar membrane structures
Pykäläinen, Anette; Boczkowska, Malgorzata; Zhao, Hongxia; Saarikangas, Juha; Rebowski, Grzegorz; Jansen, Maurice; Hakanen, Janne; Koskela, Essi V.; Peränen, Johan; Vihinen, Helena; Jokitalo, Eija; Salminen, Marjo; Ikonen, Elina; Dominguez, Roberto; Lappalainen, Pekka
2013-05-29
Bin/amphipysin/Rvs (BAR)-domain proteins sculpt cellular membranes and have key roles in processes such as endocytosis, cell motility and morphogenesis. BAR domains are divided into three subfamilies: BAR- and F-BAR-domain proteins generate positive membrane curvature and stabilize cellular invaginations, whereas I-BAR-domain proteins induce negative curvature and stabilize protrusions. We show that a previously uncharacterized member of the I-BAR subfamily, Pinkbar, is specifically expressed in intestinal epithelial cells, where it localizes to Rab13-positive vesicles and to the plasma membrane at intercellular junctions. Notably, the BAR domain of Pinkbar does not induce membrane tubulation but promotes the formation of planar membrane sheets. Structural and mutagenesis analyses reveal that the BAR domain of Pinkbar has a relatively flat lipid-binding interface and that it assembles into sheet-like oligomers in crystals and in solution, which may explain its unique membrane-deforming activity.
Pearling instability of membrane tubes driven by curved proteins and actin polymerization
NASA Astrophysics Data System (ADS)
Jelerčič, U.; Gov, N. S.
2015-12-01
Membrane deformation inside living cells is crucial for the proper shaping of various intracellular organelles and is necessary during the fission/fusion processes that allow membrane recycling and transport (e.g. endocytosis). Proteins that induce membrane curvature play a key role in such processes, mostly by adsorbing to the membrane and forming a scaffold that deforms the membrane according to the curvature of the proteins. In this paper we explore the possibility of membrane tube destabilization through a pearling mechanism enabled by the combined effects of the adsorbed curved proteins and the actin polymerization that they recruit. The pearling instability can serve as the initiation for fission of the tube into vesicles. We find that adsorbed curved proteins are more likely to stabilize the tubes, while the actin polymerization can provide the additional constrictive force needed for the robust instability. We discuss the relevance of the theoretical results to in vivo and in vitro experiments.
Reconstituting ring-rafts in bud-mimicking topography of model membranes
NASA Astrophysics Data System (ADS)
Ryu, Yong-Sang; Lee, In-Ho; Suh, Jeng-Hun; Park, Seung Chul; Oh, Soojung; Jordan, Luke R.; Wittenberg, Nathan J.; Oh, Sang-Hyun; Jeon, Noo Li; Lee, Byoungho; Parikh, Atul N.; Lee, Sin-Doo
2014-07-01
During vesicular trafficking and release of enveloped viruses, the budding and fission processes dynamically remodel the donor cell membrane in a protein- or a lipid-mediated manner. In all cases, in addition to the generation or relief of the curvature stress, the buds recruit specific lipids and proteins from the donor membrane through restricted diffusion for the development of a ring-type raft domain of closed topology. Here, by reconstituting the bud topography in a model membrane, we demonstrate the preferential localization of cholesterol- and sphingomyelin-enriched microdomains in the collar band of the bud-neck interfaced with the donor membrane. The geometrical approach to the recapitulation of the dynamic membrane reorganization, resulting from the local radii of curvatures from nanometre-to-micrometre scales, offers important clues for understanding the active roles of the bud topography in the sorting and migration machinery of key signalling proteins involved in membrane budding.
Reconstituting ring-rafts in bud-mimicking topography of model membranes
Ryu, Yong-Sang; Lee, In-Ho; Suh, Jeng-Hun; Park, Seung Chul; Oh, Soojung; Jordan, Luke R.; Wittenberg, Nathan J.; Oh, Sang-Hyun; Jeon, Noo Li; Lee, Byoungho; Parikh, Atul N.; Lee, Sin-Doo
2014-01-01
During vesicular trafficking and release of enveloped viruses, the budding and fission processes dynamically remodel the donor cell membrane in a protein- or a lipid-mediated manner. In all cases, in addition to the generation or relief of the curvature stress, the buds recruit specific lipids and proteins from the donor membrane through restricted diffusion for the development of a ring-type raft domain of closed topology. Here, by reconstituting the bud topography in a model membrane, we demonstrate the preferential localization of cholesterol- and sphingomyelin-enriched microdomains in the collar band of the bud-neck interfaced with the donor membrane. The geometrical approach to the recapitulation of the dynamic membrane reorganization, resulting from the local radii of curvatures from nanometre-to-micrometre scales, offers important clues for understanding the active roles of the bud topography in the sorting and migration machinery of key signalling proteins involved in membrane budding. PMID:25058275
Characterizing Suspension Plasma Spray Coating Formation Dynamics through Curvature Measurements
NASA Astrophysics Data System (ADS)
Chidambaram Seshadri, Ramachandran; Dwivedi, Gopal; Viswanathan, Vaishak; Sampath, Sanjay
2016-12-01
Suspension plasma spraying (SPS) enables the production of variety of microstructures with unique mechanical and thermal properties. In SPS, a liquid carrier (ethanol/water) is used to transport the sub-micrometric feedstock into the plasma jet. Considering complex deposition dynamics of SPS technique, there is a need to better understand the relationships among spray conditions, ensuing particle behavior, deposition stress evolution and resultant properties. In this study, submicron yttria-stabilized zirconia particles suspended in ethanol were sprayed using a cascaded arc plasma torch. The stresses generated during the deposition of the layers (termed evolving stress) were monitored via the change in curvature of the substrate measured using an in situ measurement apparatus. Depending on the deposition conditions, coating microstructures ranged from feathery porous to dense/cracked deposits. The evolving stresses and modulus were correlated with the observed microstructures and visualized via process maps. Post-deposition bi-layer curvature measurement via low temperature thermal cycling was carried out to quantify the thermo-elastic response of different coatings. Lastly, preliminary data on furnace cycle durability of different coating microstructures were evaluated. This integrated study involving in situ diagnostics and ex situ characterization along with process maps provides a framework to describe coating formation mechanisms, process parametrics and microstructure description.
Effect of compliance on haptic perception of curvature.
Song, Weilai; Flanders, Martha; Soechting, John F
2004-01-01
The haptic sense of geometric properties such as the curvature of a contour is derived from somatosensory cues about the motions and forces experienced during exploratory actions. This study addressed the question of whether compliance, the relationship between force and displacement, influences haptic perception of curvature. Subjects traced a curved 30 cm long compliant contour by grasping the handle of a manipulandum and reported whether the contour curved towards or away from them. The contour at which there was equal probability of responding either way was taken to represent one that was sensed as being straight. The compliance of the contour was varied, being constant, greatest in the middle or greatest at the ends. Subjects exhibited a bias in what they sensed to be a straight edge. However, the actual handpath that was judged to be straight did not vary across the three compliance profiles. Our results rule out a hypothetical strategy in which an intended motion is planned and the actual trajectory is then inferred by sensing force feedback. Another strategy in which the force against the contour is controlled and the handpath is inferred from proprioceptive feedback is more consistent with the observations.
Extrinsic curvature, geometric optics, and lamellar order on curved substrates.
Kamien, Randall D; Nelson, David R; Santangelo, Christian D; Vitelli, Vincenzo
2009-11-01
When thermal energies are weak, two-dimensional lamellar structures confined on a curved substrate display complex patterns arising from the competition between layer bending and compression in the presence of geometric constraints. We present broad design principles to engineer the geometry of the underlying substrate so that a desired lamellar pattern can be obtained by self-assembly. Two distinct physical effects are identified as key factors that contribute to the interaction between the shape of the underlying surface and the resulting lamellar morphology. The first is a local ordering field for the direction of each individual layer, which tends to minimize its curvature with respect to the three-dimensional embedding. The second is a nonlocal effect controlled by the intrinsic geometry of the surface that forces the normals to the (nearly incompressible) layers to lie on geodesics, leading to caustic formation as in optics. As a result, different surface morphologies with predominantly positive or negative Gaussian curvature can act as converging or diverging lenses, respectively. By combining these ingredients, as one would with different optical elements, complex lamellar morphologies can be obtained. This smectic optometry enables the manipulation of lamellar configurations for the design of materials.
Directing peptide crystallization through curvature control of nanotubes.
Gobeaux, Frédéric; Tarabout, Christophe; Fay, Nicolas; Meriadec, Cristelle; Ligeti, Melinda; Buisson, David-Alexandre; Cintrat, Jean-Christophe; Artzner, Franck; Paternostre, Maïté
2014-07-01
In the absence of efficient crystallization methods, the molecular structures of fibrous assemblies have so far remained rather elusive. In this paper, we present a rational method to crystallize the lanreotide octapeptide by modification of a residue involved in a close contact. Indeed, we show that it is possible to modify the curvature of the lanreotide nanotubes and hence their diameter. This fine tuning leads to crystallization because the radius of curvature of the initially bidimensional peptide wall can be increased up to a point where the wall is essentially flat and a crystal is allowed to grow along a third dimension. By comparing X-ray diffraction data and Fourier transform Raman spectra, we show that the nanotubes and the crystals share similar cell parameters and molecular conformations, proving that there is indeed a structural continuum between these two morphologies. These results illustrate a novel approach to crystallization and represent the first step towards the acquisition of an Å-resolution structure of the lanreotide nanotubes β-sheet assembly.
Using curvature extrema to track the evolution of axisymmetric interfaces
NASA Astrophysics Data System (ADS)
Vogel, M. J.; Nitsche, M.; Steen, P. H.
2003-11-01
The temporal evolution of the shape of an interface can exhibit phenomena such as break-up or pinch-off, which are fundamental events that must be controlled in many capillary systems of technological importance. For an axisymmetric surface, lemmas rooted in differential geometry dictate that curvature extrema coincide with curvature crossings or profile extrema. These features provide a convenient means to characterize the profiles of interfaces and to track their evolution even up to singularities, such as occurs at pinch-off. Being solely geometric in nature, this characterization is not limited by the physical properties of the system, e.g., Newtonian versus non-Newtonian behavior, viscous versus inviscid etc. We illustrate by tracking images from evolving soap-films (passive) and polymeric films (non-Newtonian), both observed in experiment, and a deforming mathematical surface predicted by the inviscid vortex-sheet model in simulation. We will discuss extensions of this approach that bring in some model of the flow (e.g. inviscid) and thereby lead to a dynamical system for the motion of the extrema.
Magnetophoretic induction of curvature in coleoptiles and hypocotyls.
Kuznetsov, O A; Hasenstein, K H
1997-11-01
Coleoptiles of barley (Hordeum vulgare) were positioned in a high gradient magnetic field (HGMF, dynamic factor gradient of H(2)/2 of 10(9)-10(10) Oe2 cm-1), generated by a ferromagnetic wedge in a uniform magnetic field and rotated on a 1 rpm clinostat. After 4 h 90% of coleoptiles had curved toward the HGMF. The cells affected by HGMF showed clear intracellular displacement of amyloplasts. Coleoptiles in a magnetic field next to a non-ferromagnetic wedge showed no preferential curvature. The small size of the area of nonuniformity of the HGMF allowed mapping of the sensitivity of the coleoptiles by varying the initial position of the wedge relative to the coleoptile apex. When the ferromagnetic wedge was placed 1 mm below the coleoptile tip only 58% of the coleoptiles curved toward the wedge indicating that the cells most sensitive to intracellular displacement of amyloplasts and thus gravity sensing are confined to the top 1 mm portion of barley coleoptiles. Similar experiments with tomato hypocotyls (Lycopersicum esculentum) also resulted in curvature toward the HGMF. The data strongly support the amyloplast-based gravity-sensing system in higher plants and the usefulness of HGMF to substitute gravity in shoots.
Magnetophoretic induction of curvature in coleoptiles and hypocotyls
NASA Technical Reports Server (NTRS)
Kuznetsov, O. A.; Hasenstein, K. H.
1997-01-01
Coleoptiles of barley (Hordeum vulgare) were positioned in a high gradient magnetic field (HGMF, dynamic factor gradient of H(2)/2 of 10(9)-10(10) Oe2 cm-1), generated by a ferromagnetic wedge in a uniform magnetic field and rotated on a 1 rpm clinostat. After 4 h 90% of coleoptiles had curved toward the HGMF. The cells affected by HGMF showed clear intracellular displacement of amyloplasts. Coleoptiles in a magnetic field next to a non-ferromagnetic wedge showed no preferential curvature. The small size of the area of nonuniformity of the HGMF allowed mapping of the sensitivity of the coleoptiles by varying the initial position of the wedge relative to the coleoptile apex. When the ferromagnetic wedge was placed 1 mm below the coleoptile tip only 58% of the coleoptiles curved toward the wedge indicating that the cells most sensitive to intracellular displacement of amyloplasts and thus gravity sensing are confined to the top 1 mm portion of barley coleoptiles. Similar experiments with tomato hypocotyls (Lycopersicum esculentum) also resulted in curvature toward the HGMF. The data strongly support the amyloplast-based gravity-sensing system in higher plants and the usefulness of HGMF to substitute gravity in shoots.
On the breakdown of the curvature perturbation ζ during reheating
Algan, Merve Tarman; Kaya, Ali; Kutluk, Emine Seyma E-mail: ali.kaya@boun.edu.tr
2015-04-01
It is known that in single scalar field inflationary models the standard curvature perturbation ζ, which is supposedly conserved at superhorizon scales, diverges during reheating at times 0φ-dot =, i.e. when the time derivative of the background inflaton field vanishes. This happens because the comoving gauge 0φ=, where φ denotes the inflaton perturbation, breaks down when 0φ-dot =. The issue is usually bypassed by averaging out the inflaton oscillations but strictly speaking the evolution of ζ is ill posed mathematically. We solve this problem in the free theory by introducing a family of smooth gauges that still eliminates the inflaton fluctuation φ in the Hamiltonian formalism and gives a well behaved curvature perturbation ζ, which is now rigorously conserved at superhorizon scales. At the linearized level, this conserved variable can be used to unambiguously propagate the inflationary perturbations from the end of inflation to subsequent epochs. We discuss the implications of our results for the inflationary predictions.
Gauss-Bonnet black holes with nonconstant curvature horizons
Maeda, Hideki
2010-06-15
We investigate static and dynamical n({>=}6)-dimensional black holes in Einstein-Gauss-Bonnet gravity of which horizons have the isometries of an (n-2)-dimensional Einstein space with a condition on its Weyl tensor originally given by Dotti and Gleiser. Defining a generalized Misner-Sharp quasilocal mass that satisfies the unified first law, we show that most of the properties of the quasilocal mass and the trapping horizon are shared with the case with horizons of constant curvature. It is shown that the Dotti-Gleiser solution is the unique vacuum solution if the warp factor on the (n-2)-dimensional Einstein space is nonconstant. The quasilocal mass becomes constant for the Dotti-Gleiser black hole and satisfies the first law of the black-hole thermodynamics with its Wald entropy. In the non-negative curvature case with positive Gauss-Bonnet constant and zero cosmological constant, it is shown that the Dotti-Gleiser black hole is thermodynamically unstable. Even if it becomes locally stable for the nonzero cosmological constant, it cannot be globally stable for the positive cosmological constant.
Residual Stress Determination from a Laser-Based Curvature Measurement
Swank, William David; Gavalya, Rick Allen; Wright, Julie Knibloe; Wright, Richard Neil
2000-05-01
Thermally sprayed coating characteristics and mechanical properties are in part a result of the residual stress developed during the fabrication process. The total stress state in a coating/substrate is comprised of the quench stress and the coefficient of thermal expansion (CTE) mismatch stress. The quench stress is developed when molten particles impact the substrate and rapidly cool and solidify. The CTE mismatch stress results from a large difference in the thermal expansion coefficients of the coating and substrate material. It comes into effect when the substrate/coating combination cools from the equilibrated deposit temperature to room temperature. This paper describes a laser-based technique for measuring the curvature of a coated substrate and the analysis required to determine residual stress from curvature measurements. Quench stresses were determined by heating the specimen back to the deposit temperature thus removing the CTE mismatch stress. By subtracting the quench stress from the total residual stress at room temperature, the CTE mismatch stress was estimated. Residual stress measurements for thick (>1mm) spinel coatings with a Ni-Al bond coat on 304 stainless steel substrates were made. It was determined that a significant portion of the residual stress results from the quenching stress of the bond coat and that the spinel coating produces a larger CTE mismatch stress than quench stress.
Residual stress determination from a laser-based curvature measurement
W. D. Swank; R. A. Gavalya; J. K. Wright; R. N. Wright
2000-05-08
Thermally sprayed coating characteristics and mechanical properties are in part a result of the residual stress developed during the fabrication process. The total stress state in a coating/substrate is comprised of the quench stress and the coefficient of thermal expansion (CTE) mismatch stress. The quench stress is developed when molten particles impact the substrate and rapidly cool and solidify. The CTE mismatch stress results from a large difference in the thermal expansion coefficients of the coating and substrate material. It comes into effect when the substrate/coating combination cools from the equilibrated deposit temperature to room temperature. This paper describes a laser-based technique for measuring the curvature of a coated substrate and the analysis required to determine residual stress from curvature measurements. Quench stresses were determined by heating the specimen back to the deposit temperature thus removing the CTE mismatch stress. By subtracting the quench stress from the total residual stress at room temperature, the CTE mismatch stress was estimated. Residual stress measurements for thick (>1mm) spinel coatings with a Ni-Al bond coat on 304 stainless steel substrates were made. It was determined that a significant portion of the residual stress results from the quenching stress of the bond coat and that the spinel coating produces a larger CTE mismatch stress than quench stress.
Extrinsic curvature, geometric optics, and lamellar order on curved substrates
NASA Astrophysics Data System (ADS)
Kamien, Randall D.; Nelson, David R.; Santangelo, Christian D.; Vitelli, Vincenzo
2009-11-01
When thermal energies are weak, two-dimensional lamellar structures confined on a curved substrate display complex patterns arising from the competition between layer bending and compression in the presence of geometric constraints. We present broad design principles to engineer the geometry of the underlying substrate so that a desired lamellar pattern can be obtained by self-assembly. Two distinct physical effects are identified as key factors that contribute to the interaction between the shape of the underlying surface and the resulting lamellar morphology. The first is a local ordering field for the direction of each individual layer, which tends to minimize its curvature with respect to the three-dimensional embedding. The second is a nonlocal effect controlled by the intrinsic geometry of the surface that forces the normals to the (nearly incompressible) layers to lie on geodesics, leading to caustic formation as in optics. As a result, different surface morphologies with predominantly positive or negative Gaussian curvature can act as converging or diverging lenses, respectively. By combining these ingredients, as one would with different optical elements, complex lamellar morphologies can be obtained. This smectic optometry enables the manipulation of lamellar configurations for the design of materials.
Dynamic cutaneous information is sufficient for precise curvature discrimination
Cheeseman, Jacob R.; Norman, J. Farley; Kappers, Astrid M. L.
2016-01-01
Our tactual perceptual experiences occur when we interact, actively and passively, with environmental objects and surfaces. Previous research has demonstrated that active manual exploration often enhances the tactual perception of object shape. Nevertheless, the factors that contribute to this enhancement are not well understood. The present study evaluated the ability of 28 younger (mean age was 23.1 years) and older adults (mean age was 71.4 years) to discriminate curved surfaces by actively feeling objects with a single index finger and by passively feeling objects that moved relative to a restrained finger. While dynamic cutaneous stimulation was therefore present in both conditions, active exploratory movements only occurred in one. The results indicated that there was a significant and large effect of age, such that the older participants’ thresholds were 43.8 percent higher than those of the younger participants. Despite the overall adverse effect of age, the pattern of results across the active and passive touch conditions was identical. For both age groups, the curvature discrimination thresholds obtained for passive touch were significantly lower than those that occurred during active touch. Curvature discrimination performance was therefore best in the current study when dynamic cutaneous stimulation occurred in the absence of active movement. PMID:27137417
Membrane paradigm for Einstein-Gauss-Bonnet gravity
NASA Astrophysics Data System (ADS)
Jacobson, Ted; Mohd, Arif; Sarkar, Sudipta
2017-03-01
We construct the membrane paradigm for black objects in Einstein-Gauss-Bonnet gravity in spacetime dimensions ≥5 . As in the case of general relativity, the horizon can be modeled as a membrane endowed with fluidlike properties. We derive the stress tensor for this membrane fluid and study the perturbation around static backgrounds with constant curvature horizon cross section, for which the stress tensor can be regularized with the usual redshift factor, and expressed in the form of a Newtonian viscous fluid with pressure, shear viscosity and bulk viscosity. We evaluate the transport coefficients for black holes with constant curvature horizons and negative or zero cosmological constant. For the black brane geometry our result for the ratio of shear viscosity to entropy density agrees with that obtained previously in different frameworks.
NASA Astrophysics Data System (ADS)
Dass, Sumit; Narayan Dash, Jitendra; Jha, Rajan
2016-03-01
We propose a highly sensitive curvature sensor based on cascaded single mode fiber (SMF) tapers with a microcavity. The microcavity is created by splicing a small piece of hollow core photonic crystal fiber (HCPCF) at the end of an SMF to obtain a sharp interference pattern. Experimental results show that two SMF tapers enhance the curvature sensitivity of the system and by changing the tapering parameters of the second taper, the curvature sensitivity of the system can be tailored, together with the fringe contrast of the interference pattern. A maximum curvature sensitivity of 10.4 dB/m-1 is observed in the curvature range 0 to 1 m-1 for a second taper diameter of 18 μm. The sensing setup is highly stable and shows very low temperature sensitivity. As the interrogation is intensity based, a low cost optical power meter can be utilized to determine the curvature.
Membrane Fission: Model for Intermediate Structures
Kozlovsky, Yonathan; Kozlov, Michael M.
2003-01-01
Membrane budding-fission is a fundamental process generating intracellular carriers of proteins. Earlier works were focused only on formation of coated buds connected to the initial membrane by narrow membrane necks. We present the theoretical analysis of the whole pathway of budding-fission, including the crucial stage where the membrane neck undergoes fission and the carrier separates from the donor membrane. We consider two successive intermediates of the reaction: 1), a constricted membrane neck coming out of aperture of the assembling protein coat, and 2), hemifission intermediate resulting from self-fusion of the inner monolayer of the neck, while its outer monolayer remains continuous. Transformation of the constricted neck into the hemifission intermediate is driven by the membrane stress produced in the neck by the protein coat. Although apparently similar to hemifusion, the fission is predicted to have an opposite dependence on the monolayer spontaneous curvature. Analysis of the further stages of the process demonstrates that in all practically important cases the hemifission intermediate decays spontaneously into two separate membranes, thereby completing the fission process. We formulate the “job description” for fission proteins by calculating the energy they have to deliver and the radii of the protein coat aperture which have to be reached to drive the fission process. PMID:12829467
Electrodiffusion of lipids on membrane surfaces
NASA Astrophysics Data System (ADS)
Zhou, Y. C.
2012-05-01
Lateral translocation of lipids and proteins is a universal process on membrane surfaces. Local aggregation or organization of lipids and proteins can be induced when the random lateral motion is mediated by the electrostatic interactions and membrane curvature. Although the lateral diffusion rates of lipids on membranes of various compositions are measured and the electrostatic free energies of predetermined protein-membrane-lipid systems can be computed, the process of the aggregation and the evolution to the electrostatically favorable states remain largely undetermined. Here we propose an electrodiffusion model, based on the variational principle of the free energy functional, for the self-consistent lateral drift-diffusion of multiple species of charged lipids on membrane surfaces. Finite sizes of lipids are modeled to enforce the geometrical constraint of the lipid concentration on membrane surfaces. A surface finite element method is developed to appropriate the Laplace-Beltrami operators in the partial differential equations of the model. Our model properly describes the saturation of lipids on membrane surfaces, and correctly predicts that the MARCKS peptide can consistently sequester three multivalent phosphatidylinositol 4,5-bisphosphate lipids through its basic amino acid residues, regardless of a wide range of the percentage of monovalent phosphatidylserine in the membrane.
Interfacial interactions between natural RBC membranes and synthetic polymeric nanoparticles
NASA Astrophysics Data System (ADS)
Luk, Brian T.; Jack Hu, Che-Ming; Fang, Ronnie H.; Dehaini, Diana; Carpenter, Cody; Gao, Weiwei; Zhang, Liangfang
2014-02-01
The unique structural features and stealth properties of a recently developed red blood cell membrane-cloaked nanoparticle (RBC-NP) platform raise curiosity over the interfacial interactions between natural cellular membranes and polymeric nanoparticle substrates. Herein, several interfacial aspects of the RBC-NPs are examined, including completeness of membrane coverage, membrane sidedness upon coating, and the effects of polymeric particles' surface charge and surface curvature on the membrane cloaking process. The study shows that RBC membranes completely cover negatively charged polymeric nanoparticles in a right-side-out manner and enhance the particles' colloidal stability. The membrane cloaking process is applicable to particle substrates with a diameter ranging from 65 to 340 nm. Additionally, the study reveals that both surface glycans on RBC membranes and the substrate properties play a significant role in driving and directing the membrane-particle assembly. These findings further the understanding of the dynamics between cellular membranes and nanoscale substrates and provide valuable information toward future development and characterization of cellular membrane-cloaked nanodevices.The unique structural features and stealth properties of a recently developed red blood cell membrane-cloaked nanoparticle (RBC-NP) platform raise curiosity over the interfacial interactions between natural cellular membranes and polymeric nanoparticle substrates. Herein, several interfacial aspects of the RBC-NPs are examined, including completeness of membrane coverage, membrane sidedness upon coating, and the effects of polymeric particles' surface charge and surface curvature on the membrane cloaking process. The study shows that RBC membranes completely cover negatively charged polymeric nanoparticles in a right-side-out manner and enhance the particles' colloidal stability. The membrane cloaking process is applicable to particle substrates with a diameter ranging from
Kulprathipanja, Santi; Kulkarni, Sudhir S.; Funk, Edward W.
1988-01-01
A multicomponent membrane which may be used for separating various components which are present in a fluid feed mixture comprises a mixture of a plasticizer such as a glycol and an organic polymer cast upon a porous organic polymer support. The membrane may be prepared by casting an emulsion or a solution of the plasticizer and polymer on the porous support, evaporating the solvent and recovering the membrane after curing.
Closed membrane shapes with attached BAR domains subject to external force of actin filaments.
Mesarec, Luka; Góźdź, Wojciech; Iglič, Veronika Kralj; Kralj, Samo; Iglič, Aleš
2016-05-01
Membrane deformations induced by attached BAR superfamily domains could trigger or facilitate the growth of plasma membrane protrusions. The BAR domain family consists of BAR, F-BAR and I-BAR domains, each enforcing a different local curvature when attached to the membrane surface. Our theoretical study mainly focuses on the role of I-BAR in the membrane tubular deformations generated or stabilised by actin filaments. The influence of the area density of membrane attached BAR domains and their intrinsic curvature on the closed membrane shapes (vesicles) was investigated numerically. We derived an analytical approximative expression for the critical relative area density of BARs at which the membrane tubular protrusions on vesicles are most prominent. We have shown that the BARs with a higher intrinsic curvature induce thinner and longer cylindrical protrusions. The average orientation of the membrane attached BARs is altered when the vesicle shape is subjected to external force of growing actin rod-like structure inside a vesicle. The average orientation angle of membrane attached BARs may indicate whether the actin filaments are just stabilising the protrusion or generating it by stretching the vesicle.
Heightened sour preferences during childhood.
Liem, Djin Gie; Mennella, Julie A
2003-02-01
Basic research has revealed that the chemical sensory world of children is different from that of adults, as evidenced by their heightened preferences for sweet and salty tastes. However, little is known about the ontogeny of sour taste preferences, despite the growing market of extreme sour candies. The present study investigated whether the level of sourness most preferred in a food matrix and the ability to discriminate differences in sour intensity differed between 5- to 9-year-old children and their mothers, by using a rank-by-elimination procedure embedded in the context of a game. Mothers also completed a variety of questionnaires and children were asked several questions to assess whether children's temperament and food preferences and habits related to sour preferences. The results indicated that, although every mother and all but two of the children (92%) were able to rank the gelatins from most to least sour, more than one-third (35%) of the children, but virtually none of the adults, preferred the high levels of sour taste (0.25 M citric acid) in gelatin. Those children who preferred the extreme sour tastes were significantly less food neophobic (P < 0.05) and tended to experience a greater variety of fruits when compared with the remaining children (P = 0.11). Moreover, the children's preference for sour tastes generalized to other foods, such as candies and lemons, as reported by both children and mothers. These findings are the first experimental evidence to demonstrate that sour taste preferences are heightened during childhood and that such preferences are related to children's food habits and preferences. Further research is needed to unfold the relationship between the level of sour taste preferred and the actual consumption of sour-tasting foods and flavors in children.
Radius of Curvature Measurements: An Independent Look at Accuracy Using Novel Optical Metrology
NASA Technical Reports Server (NTRS)
Taylor, Bryon; Kahan, Mark; Russell, Kevin (Technical Monitor)
2002-01-01
The AMSD (Advanced Mirror System Demonstrator) program mirror specifications include the ability to manufacture the mirror to a radius of curvature of 10 m +/- 1 mm and to control its radius at 30K to the same specification. Therefore, it is necessary for the Government Team to be able to measure mirror radius of curvature to an accuracy of better than 0.5 mm. This presentation discusses a novel optical metrology system for measuring radius of curvature.
3D Curves With a Prescribed Curvature and Torsion for a Flying Robot
Bestaoui, Yasmina
2008-06-12
The objective of this paper is to generate a desired flight path to be followed by an flying robot. A curve with discontinuous curvature and torsion is not appropriate for smooth motions for any vehicle architecture. Three different classes of curves are presented. First, constant curvature and torsion followed by a linear variation versus the curvilinear abscissa then a quadratic variation. Finally, the problem of maneuvers between two trim helices of different curvature and torsion is tackled with.
The effects of out-of-plane curvature on the growth of epithelia
NASA Astrophysics Data System (ADS)
Yevick, Hannah; Duclos, Guillaume; Bonnet, Isabelle; Silberzan, Pascal
2015-03-01
Collective cell migration is at play in many well documented in vivo processes for example, wound re-epithelialization, cancer metastasis and dorsal closure. We present a study describing the effect of out of plane curvature on the collective properties of epithelial tissue. Microfabricated environments are used to deconstruct a monolayer's response to geometry. Specifically, fibers with a radius of curvature between 1um-100um are populated with MDCK cells, a model epithelial, kidney-derived, cell line. Migration dynamics as well as cell architecture are quantified and the effects of curvature compared with confinement alone. Large curvatures trigger specific cellular behaviors and organization that may shed light on tubulogenesis.
Actuation curvature limits for a composite beam with embedded shape memory alloy wires
NASA Astrophysics Data System (ADS)
Naghashian, S.; Fox, B. L.; Barnett, M. R.
2014-06-01
Shape memory alloy composites were manufactured using NiTi wires and woven glass fiber pre-impregnated fabrics. A closed form analytical model was developed to investigate the curvature achievable during actuation. The experimental results of actuation showed reasonable agreement with the model. Actuation temperatures were between ˜55 and 110 °C, curvatures of 0.25-0.5 m-1 were obtained and the stresses in the wires were estimated to have reached 265 MPa during actuation. An actuation curvature map was produced, which shows the actuation limits and approximate temperature-curvature curves for the general case of a composite containing shape memory alloy wires.
Detecting curvatures in digital images using filters derived from differential geometry
NASA Astrophysics Data System (ADS)
Toro Giraldo, Juanita
2015-09-01
Detection of curvature in digital images is an important theoretical and practical problem in image processing. Many important features in an image are associated with curvature and the detection of such features is reduced to detection and characterization of curvatures. Differential geometry studies many kinds of curvature operators and from these curvature operators is possible to derive powerful filters for image processing which are able to detect curvature in digital images and videos. The curvature operators are formulated in terms of partial differential operators which can be applied to images via convolution with generalized kernels derived from the the Korteweg- de Vries soliton . We present an algorithm for detection of curvature in digital images which is implemented using the Maple package ImageTools. Some experiments were performed and the results were very good. In a future research will be interesting to compare the results using the Korteweg-de Vries soliton with the results obtained using Airy derivatives. It is claimed that the resulting curvature detectors could be incorporated in standard programs for image processing.
Finite element analysis of a femur to deconstruct the paradox of bone curvature.
Jade, Sameer; Tamvada, Kelli H; Strait, David S; Grosse, Ian R
2014-01-21
Most long limb bones in terrestrial mammals exhibit a longitudinal curvature and have been found to be loaded in bending. Bone curvature poses a paradox in terms of the mechanical function of limb bones, for many believe the curvature in these bones increases bending stress, potentially reducing the bone's load carrying capacity (i.e., its mechanical strength). The aim of this study is to investigate the role of longitudinal bone curvature in the design of limb bones. In particular, it has been hypothesized that bone curvature results in a trade-off between the bone's mechanical strength and its bending predictability. We employed finite element analysis (FEA) of abstract and realistic human femora to address this issue. Geometrically simplified human femur models with different curvatures were developed and analyzed with a commercial FEA tool to examine how curvature affects the bone's bending predictability and load carrying capacity. Results were post-processed to yield probability density functions (PDFs) describing the circumferential location of maximum equivalent stress for various curvatures in order to assess bending predictability. To validate our findings, a finite element model was built from a CT scan of a real human femur and compared to the simplified femur model. We found general agreement in trends but some quantitative differences most likely due to the geometric differences between the digitally reconstructed and the simplified finite element models. As hypothesized by others, our results support the hypothesis that bone curvature can increase bending predictability, but at the expense of bone strength.
Measurement of curvature and twist of a deformed object using digital holography
Chen Wen; Quan Chenggen; Cho Jui Tay
2008-05-20
Measurement of curvature and twist is an important aspect in the study of object deformation. In recent years, several methods have been proposed to determine curvature and twist of a deformed object using digital shearography. Here we propose a novel method to determine the curvature and twist of a deformed object using digital holography and a complex phasor. A sine/cosine transformation method and two-dimensional short time Fourier transform are proposed subsequently to process the wrapped phase maps. It is shown that high-quality phase maps corresponding to curvature and twist can be obtained. An experiment is conducted to demonstrate the validity of the proposed method.
The association between cervical spine curvature and neck pain
Grob, D.; Frauenfelder, H.
2006-01-01
Degenerative changes of the cervical spine are commonly accompanied by a reduction or loss of the segmental or global lordosis, and are often considered to be a cause of neck pain. Nonetheless, such changes may also remain clinically silent. The aim of this study was to examine the correlation between the presence of neck pain and alterations of the normal cervical lordosis in people aged over 45 years. One hundred and seven volunteers, who were otherwise undergoing treatment for lower extremity problems in our hospital, took part. Sagittal radiographs of the cervical spine were taken and a questionnaire was completed, enquiring about neck pain and disability in the last 12 months. Based on the latter, subjects were divided into a group with neck pain (N = 54) and a group without neck pain (N = 53). The global curvature of the cervical spine (C2–C7) and each segmental angle were measured from the radiographs, using the posterior tangent method, and examined in relation to neck complaints. No significant difference between the two groups could be found in relation to the global curvature, the segmental angles, or the incidence of straight-spine or kyphotic deformity (P > 0.05). Twenty-three per cent of the people with neck pain and 17% of those without neck pain showed a segmental kyphosis deformity of more than 4° in at least one segment—most frequently at C4/5, closely followed by C5/6 and C3/4. The average segmental angle at the kyphotic level was 6.5° in the pain group and 6.3° in the group without pain, with a range of 5–10° in each group. In the group with neck pain, there was no association between any of the clinical characteristics (duration, frequency, intensity of pain; radiating pain; sensory/motor disturbances; disability; healthcare utilisation) and either global cervical curvature or segmental angles. The presence of such structural abnormalities in the patient with neck pain must be considered coincidental, i.e. not necessarily
Dynamics of two-component membranes surrounded by viscoelastic media.
Komura, Shigeyuki; Yasuda, Kento; Okamoto, Ryuichi
2015-11-04
We discuss the dynamics of two-component fluid membranes which are surrounded by viscoelastic media. We assume that membrane-embedded proteins can diffuse laterally and induce a local membrane curvature. The mean squared displacement of a tagged membrane segment is obtained as a generalized Einstein relation. When the elasticity of the surrounding media obeys a power-law behavior in frequency, an anomalous diffusion of the membrane segment is predicted. We also consider the situation where the proteins generate active non-equilibrium forces. The generalized Einstein relation is further modified by an effective temperature that depends on the force dipole energy. The obtained generalized Einstein relations are useful for membrane microrheology experiments.
Role of initially formed cake layers on limiting membrane fouling in membrane bioreactors.
Wu, Bing; Kitade, Tamotsu; Chong, Tzyy Haur; Uemura, Tadahiro; Fane, Anthony G
2012-08-01
In this study, an interesting phenomenon was observed that when the levels of soluble polysaccharides (SP) and soluble transparent exopolymer particles (sTEP) in the MBR unexpectedly and suddenly increased, the cleaned membranes tended to be more easily fouled compared to the membranes with the initial cake layers formed in a slow TMP increase stage. Foulant analysis indicated great accumulation amounts of SP and sTEP on the cleaned membrane. FT-IR spectra further confirmed that hydroxyl and amide groups in the soluble substances preferred to attach on the cleaned membranes. While, the initially formed cake layers on the membranes played a role to decrease zeta potential of cleaned membranes, which created less interaction with the soluble substances. It suggests that forming loose-structured cake layers on the primary membranes could be thought as an effective membrane fouling control strategy.
Topological implications of negative curvature for biological and social networks
NASA Astrophysics Data System (ADS)
Albert, Réka; DasGupta, Bhaskar; Mobasheri, Nasim
2014-03-01
Network measures that reflect the most salient properties of complex large-scale networks are in high demand in the network research community. In this paper we adapt a combinatorial measure of negative curvature (also called hyperbolicity) to parametrized finite networks, and show that a variety of biological and social networks are hyperbolic. This hyperbolicity property has strong implications on the higher-order connectivity and other topological properties of these networks. Specifically, we derive and prove bounds on the distance among shortest or approximately shortest paths in hyperbolic networks. We describe two implications of these bounds to crosstalk in biological networks, and to the existence of central, influential neighborhoods in both biological and social networks.
Curvature-driven bubbles or droplets on the spiral surface
Li, Shanpeng; Liu, Jianlin; Hou, Jian
2016-01-01
Directional motion of droplets or bubbles can often be observed in nature and our daily life, and this phenomenon holds great potential in many engineering areas. The study shows that droplets or bubbles can be driven to migrate perpetually on some special substrates, such as the Archimedean spiral, the logarithmic spiral and a cantilever sheet in large deflection. It is found that a bubble approaches or deviates from the position with highest curvature of the substrate, when it is on the concave or convex side. This fact is helpful to explain the repelling water capability of Nepenthes alata. Based on the force and energy analysis, the mechanism of the bubble migration is well addressed. These findings pave a new way to accurately manipulate droplet or bubble movement, which bring inspirations to the design of microfluidic and water harvesting devices, as well as oil displacement and ore filtration. PMID:27885261
Converting entropy to curvature perturbations after a cosmic bounce
Fertig, Angelika; Lehners, Jean-Luc; Mallwitz, Enno; Wilson-Ewing, Edward
2016-10-04
We study two-field bouncing cosmologies in which primordial perturbations are created in either an ekpyrotic or a matter-dominated contraction phase. We use a non-singular ghost condensate bounce model to follow the perturbations through the bounce into the expanding phase of the universe. In contrast to the adiabatic perturbations, which on large scales are conserved across the bounce, entropy perturbations can grow significantly during the bounce phase. If they are converted into adiabatic/curvature perturbations after the bounce, they typically form the dominant contribution to the observed temperature fluctuations in the microwave background, which can have several beneficial implications. For ekpyrotic models, this mechanism loosens the constraints on the amplitude of the ekpyrotic potential while naturally suppressing the intrinsic amount of non-Gaussianity. For matter bounce models, the mechanism amplifies the scalar perturbations compared to the associated primordial gravitational waves.
Curvature-driven bubbles or droplets on the spiral surface
NASA Astrophysics Data System (ADS)
Li, Shanpeng; Liu, Jianlin; Hou, Jian
2016-11-01
Directional motion of droplets or bubbles can often be observed in nature and our daily life, and this phenomenon holds great potential in many engineering areas. The study shows that droplets or bubbles can be driven to migrate perpetually on some special substrates, such as the Archimedean spiral, the logarithmic spiral and a cantilever sheet in large deflection. It is found that a bubble approaches or deviates from the position with highest curvature of the substrate, when it is on the concave or convex side. This fact is helpful to explain the repelling water capability of Nepenthes alata. Based on the force and energy analysis, the mechanism of the bubble migration is well addressed. These findings pave a new way to accurately manipulate droplet or bubble movement, which bring inspirations to the design of microfluidic and water harvesting devices, as well as oil displacement and ore filtration.
The effect of wellbore curvature on tubular buckling and lockup
Wu, J.; Juvkam-Wold, H.C.
1995-09-01
This paper studies tubular buckling in curved wellbores (such as the build section of horizontal wells) and its effect on tubular ``lockup`` in horizontal or extended-reach wells. New buckling load equations are derived to properly predict tubular sinusoidal and helical buckling in such wellbores. The results show that the buckling loads to initiate sinusoidal and helical buckling to tubulars in curved wellbores are usually much larger than those in straight wellbores. This is because the curved wellbore tends to hold the axially compressed tubular against the outer-curve side of the wellbore. The tubular becomes less easy to buckle until higher axial compressive loads are applied. Less tubular lockup risk is then predicted for tubulars in horizontal or extended-reach wells by using the new buckling load equations. The new buckling loads in curved wellbores agree with those in straight wellbores when wellbore curvature approaches zero. Small-scale laboratory experiments also confirmed these theoretically derived buckling loads.
Buckling of Low Arches or Curved Beams of Small Curvature
NASA Technical Reports Server (NTRS)
Fung, Y C; Kaplan, A
1952-01-01
A general solution, based on the classical buckling criterion, is given for the problem of buckling of low arches under a lateral loading acting toward the center of curvature. For a sinusoidal arch under sinusoidal loading, the critical load can be expressed exactly as a simple function of the beam dimension parameters. For other arch shapes and load distributions, approximate values of the critical load can be obtained by summing a few terms of a rapidly converging Fourier series. The effects of initial end thrust and axial and lateral elastic support are discussed. The buckling load based on energy criterion of Karman and Tsien is also calculated. Results for both the classical and the energy criteria are compared with experimental results.
Thermodynamic curvature for attractive and repulsive intermolecular forces.
May, Helge-Otmar; Mausbach, Peter; Ruppeiner, George
2013-09-01
The thermodynamic curvature scalar R for the Lennard-Jones system is evaluated in phase space, including vapor, liquid, and solid state. We paid special attention to the investigation of R along vapor-liquid, liquid-solid, and vapor-solid equilibria. Because R is a measure of interaction strength, we traced out the line R=0 dividing the phase space into regions with effectively attractive (R<0) or repulsive (R>0) interactions. Furthermore, we analyzed the dependence of R on the strength of attraction applying a perturbation ansatz proposed by Weeks-Chandler-Anderson. Our results show clearly a transition from R>0 (for poorly repulsive interaction) to R<0 when loading attraction in the intermolecular potential.
Negative bending mode curvature via Robin boundary conditions
NASA Astrophysics Data System (ADS)
Adams, Samuel D. M.; Craster, Richard V.; Guenneau, Sébastien
2009-06-01
We examine the band spectrum, and associated Floquet-Bloch eigensolutions, arising in straight walled acoustic waveguides that have periodic structure along the guide. Homogeneous impedance (Robin) conditions are imposed along the guide walls and we find that in certain circumstances, negative curvature of the lowest (bending) mode can be achieved. This is unexpected, and has not been observed in a variety of physical situations examined by other authors. Further unexpected properties include the existence of the bending mode only on a subset of the Brillouin zone, as well as permitting otherwise unobtainable velocities of energy transmission. We conclude with a discussion of how such boundary conditions might be physically reproduced using effective conditions and homogenization theory, although the methodology to achieve these effective conditions is an open problem. To cite this article: S.D.M. Adams et al., C. R. Physique 10 (2009).
Camera-based curvature measurement of a large incandescent object
NASA Astrophysics Data System (ADS)
Ollikkala, Arttu V. H.; Kananen, Timo P.; Mäkynen, Anssi J.; Holappa, Markus
2013-04-01
The goal of this work was to implement a low-cost machine vision system to help the roller operator to estimate the amount of strip camber during the rolling process. The machine vision system composing of a single camera, a standard PC-computer and a LabVIEW written program using straightforward image analysis determines the magnitude and direction of camber and presents the results both in numerical and graphical form on the computer screen. The system was calibrated with LED set-up which was also used to validate the accuracy of the system by mimicking the strip curvatures. The validation showed that the maximum difference between the true and measured values was less than +/-4 mm (k=0.95) within the 22 meter long test pattern.
Theory for the curvature dependence of delta front progradation
NASA Astrophysics Data System (ADS)
Ke, Wun-Tao; Capart, Hervé
2015-12-01
When Gilbert-type deltas respond to uneven sediment supply or advance over irregular basin bathymetry, they develop curved, creased fronts prograding at speeds that vary with location along the shoreline. Relations governing the progradation rate, however, have so far been proposed only for simple special cases. In this paper, we exploit the special properties of solutions to the eikonal equation to derive a general progradation relation, applicable to delta fronts of finite angle of repose and arbitrary shoreline planform. In these circumstances, the theory explicitly relates the progradation rate to the local shoreline curvature. We illustrate the resulting morphodynamics with numerical and analytical solutions for a sinuous delta front. The proposed relation can be used to model deltaic evolution or deduce spanwise distributions of sediment supply rates from observations of foreset evolution.
Curvature ductility of reinforced and prestressed concrete columns
Suprenant, B.A.
1984-01-01
Engineers are concerned with the survival of reinforced and prestressed concrete columns during earthquakes. The prediction of column survival can be deduced from moment-curvature curves of the column section. An analytical approach is incorporated into a computer model. The computer program is based on assumed stress-strain relations for confined and unconfined concrete, nonprestressed and prestressing steel. The results of studies on reinforced and prestressed concrete columns indicate that reinforced concrete columns may be designed to resist earthquakes, while prestressed concrete columns may not. The initial reduction in moment capacity, after concrete cover spalling, of a prestressed concrete column could be as much as 50%. Analyses indicate that the bond between concrete and prestressing strand after concrete cover spalling is not critical.
Implications on the cosmic coincidence by a dynamical extrinsic curvature
NASA Astrophysics Data System (ADS)
Capistrano, Abraão J. S.; Cabral, Luis A.
2016-12-01
In this work, we apply the smooth deformation concept in order to obtain a modification of Friedmann’s equations. It is shown that the cosmic coincidence can be at least alleviated using the dynamical properties of the extrinsic curvature. We investigate the transition from nucleosynthesis to the coincidence era obtaining a very small variation of the ratio r=\\tfrac{{ρ }{{m}}}{{ρ }{{ext}}} that compares the matter energy density to extrinsic energy density, compatible with the known behavior of the deceleration parameter. We also show that the calculated ‘equivalence’ redshift matches the transition redshift from a deceleration to accelerated phase and the coincidence ceases to be. The dynamics on r is also studied based on Hubble parameter observations as the latest Baryons Acoustic Oscillations/Cosmic Microwave Background Radiation (BAO/CMBR) + SNIa.
Surface Curvature in Island Groups and Discontinuous Cratonic Structures
NASA Astrophysics Data System (ADS)
McDowell, M. S.
2002-05-01
The Canadian Archipelago includes eight major islands and a host of smaller ones. They are separated by water bodies, of varying widths attributable to glacial activity and ocean currents. Land form varies from relatively rugged mountains (~2000 m) in eastern, glacial, islands, to low lying western, similar to the continental topography adjacent. The Arctic region is thought to have been low average elevation before the Pleistocene. To a picture puzzler, it all looks like it fit together. Experimentally cutting apart the islands from large scale maps shows that the rough edges match fairly well. However, when those independent pieces are sutured together, without restraint, as in free air, the fit is far better. Far more importantly, they consistently form a noticeably concave surface. This tendency is not at all apparent in flat surface or computer screen manipulation; the pieces need to be "hand joined" or on a molded surface to allow the assembly to freely form as it will. Fitting together the coastlines above 60 \\deg north, from 120 \\deg west to 45 \\deg east, and comparing the resulting contracted area to the original, obtains an 8 percent area reduction. The curvature "humps" a trial planar section of 15 cms by 1.6 cm, a substantial difference in the radius of curvature. If you rashly suggest applying that formula globally, the resulting sphere would have a surface area of 4.7 x108,(down from 5 x108), and therefore radius of 6117 km, down from 6400, which is a rather preposterous conclusion. As nobody would believe it, I tested the idea elsewhere. The Huronian succession of six named cratons is adjacent on the south. I cut this map apart, too, and fit it together, once again getting a curvature, this time more pronounced. I am trying it with the Indonesian Archipelago, although this area has volcanic complications, and with Precambrian Basins in western Australia and Nimibia, Africa. Indications are - an essentially similar pattern of fit, but non uniform
Conditions on holographic entangling surfaces in higher curvature gravity
NASA Astrophysics Data System (ADS)
Erdmenger, Johanna; Flory, Mario; Sleight, Charlotte
2014-06-01
We study the extremal surfaces of functionals recently proposed for the holographic calculation of entanglement entropy in general higher curvature theories, using New Massive gravity and Gauss-Bonnet gravity as concrete examples. We show that the entropy functionals admit closed extremal surfaces, which for black hole backgrounds can encircle the event horizon of the black hole. In the examples considered, such closed surfaces correspond to a lower value of the entropy functional than expected from CFT calculations, implying a seeming mismatch between the bulk and boundary calculations. For Lorentzian settings we show that this problem can be resolved by imposing a causality constraint on the extremal surfaces. The possibility of deriving conditions from an alternative conical boundary condition method as proposed by Lewkowycz and Maldacena is explored.
Curvature of the energy landscape and folding of model proteins.
Mazzoni, Lorenzo N; Casetti, Lapo
2006-11-24
We study the geometric properties of the energy landscape of coarse-grained, off-lattice models of polymers by endowing the configuration space with a suitable metric, depending on the potential energy function, such that the dynamical trajectories are the geodesics of the metric. Using numerical simulations, we show that the fluctuations of the curvature clearly mark the folding transition, and that this quantity allows to distinguish between polymers having a proteinlike behavior (i.e., that fold to a unique configuration) and polymers which undergo a hydrophobic collapse but do not have a folding transition. These geometrical properties are defined by the potential energy without requiring any prior knowledge of the native configuration.
Curvature detection by entanglement generation using a beam splitter
NASA Astrophysics Data System (ADS)
Mahdifar, Ali; Dehdashti, Shahram; Roknizadeh, Rasoul; Chen, Hongsheng
2015-08-01
In this paper, we investigate the behavior of radiation field, whose state is described by the so-called sphere coherent state, through a beam splitter. These states are realization of coherent states of two-dimensional harmonic oscillator, which lives on a sphere, as radiation field. By using the linear entropy as a measure of entanglement, we show that the entanglement depends on the curvature of the sphere. So, by using the appropriating sphere coherent states, we can control the entanglement of the output states of the beam splitter in the laboratory. In addition, as the convince measures of non-classical behaviors, we consider Mandel parameters of the output states of the beam splitter and their quadrature squeezing.
Prachayasittikul, Virapong; Isarankura-Na-Ayudhya, Chartchalerm; Tantimongcolwat, Tanawut; Nantasenamat, Chanin; Galla, Hans-Joachim
2007-11-01
The molecular mechanism of ethylenediaminetetraacetic acid (EDTA)-induced membrane destabilization has been studied using a combination of four biophysical techniques on artificial lipid membranes. Data from Langmuir film balance and epifluorescence microscopy revealed the fluidization and expansion effect of EDTA on phase behavior of monolayers of either 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) or mixtures of DPPC and metal-chelating lipids, such as N(alpha),N(alpha)-Bis[carboxymethyl]-N(epsilon)-[(dioctadecylamino)succinyl]-L-lysine or 1,2-dioleoyl-sn-glycero-3-[N-(5-amino-1-carboxypentyl iminodiacetic acid) succinyl]. A plausible explanation could be drawn from the electrostatic interaction between negatively charged groups of EDTA and the positively charged choline head group of DPPC. Intercalation of EDTA into the lipid membrane induced membrane curvature as elucidated by atomic force microscopy. Growth in size and shape of the membrane protrusion was found to be time-dependent upon exposure to EDTA. Further loss of material from the lipid membrane surface was monitored in real time using a quartz crystal microbalance. This indicates membrane restabilization by exclusion of the protrusions from the surface. Loss of lipid components facilitates membrane instability, leading to membrane permeabilization and lysis.
Schneider, T; Sperling, H; Schenck, M; Schneider, U; Rübben, H
2003-05-01
Different treatment options for penile curvature exist, such as the Nesbit procedure with complete excision of the tunica albuginea or the simple plication. We prefer a modification with only superficial excision, not opening the corpora cavernosa. From January 1997 to June 2000, 68 patients were treated surgically due to penile curvature. Data was obtained from 48 patients by telephone interview. The mean penile deviation was 46 degrees. Excision of the tunica was performed only superficially and non-absorbable inverted sutures were used. The mean follow-up time in this study was 25 months. A total of 36 (75%) patients were satisfied postoperatively, 12 were unsatisfied. Eleven (23%) patients described a complete straightening, 37 (77%) a rest-curvature of 5-50 degrees (mean 14 degrees ) and 21 (44%) described a shortening of 0.5-5 cm (mean 1.2 cm). Six patients reported a recurrence. No new erectile dysfunction occurred. Superficial excision of the tunica albuginea offers the advantage of tissue-contraction due to scarring without destroying the integrity of the corpora, leading in combination with non-absorbable inverted sutures to good functional and cosmetic results.
Non-Gaussianities and curvature perturbations from hybrid inflation
NASA Astrophysics Data System (ADS)
Clesse, Sébastien; Garbrecht, Björn; Zhu, Yi
2014-03-01
For the original hybrid inflation as well as the supersymmetric F-term and D-term hybrid models, we calculate the level of non-Gaussianities and the power spectrum of curvature perturbations generated during the waterfall, taking into account the contribution of entropic modes. We focus on the regime of mild waterfall, in which inflation continues for more than about 60 e-folds N during the waterfall. We find that the associated fNL parameter goes typically from fNL≃-1/Nexit in the regime with N ≫60, where Nexit is the number of e-folds between the time of Hubble exit of a pivot scale and the end of inflation, down to fNL˜-0.3 when N ≳60, i.e., much smaller in magnitude than the current bound from Planck. Considering only the adiabatic perturbations, the power spectrum is red, with a spectral index ns=1-4/Nexit in the case N ≫60, whereas in the case N≳60, it increases up to unity. Including the contribution of entropic modes does not change observable predictions in the first case, and the spectral index is too low for this regime to be viable. In the second case, entropic modes are a relevant source for the power spectrum of curvature perturbations, of which the amplitude increases by several orders of magnitude. When spectral index values are consistent with observational constraints, the primordial spectrum amplitude is much larger than the observed value and can even lead to black hole formation. We conclude that, due to the important contribution of entropic modes, the parameter space leading to a mild waterfall phase is excluded by cosmic microwave background observations for all the considered models.
3D Clumped Cell Segmentation Using Curvature Based Seeded Watershed
Atta-Fosu, Thomas; Guo, Weihong; Jeter, Dana; Mizutani, Claudia M.; Stopczynski, Nathan; Sousa-Neves, Rui
2017-01-01
Image segmentation is an important process that separates objects from the background and also from each other. Applied to cells, the results can be used for cell counting which is very important in medical diagnosis and treatment, and biological research that is often used by scientists and medical practitioners. Segmenting 3D confocal microscopy images containing cells of different shapes and sizes is still challenging as the nuclei are closely packed. The watershed transform provides an efficient tool in segmenting such nuclei provided a reasonable set of markers can be found in the image. In the presence of low-contrast variation or excessive noise in the given image, the watershed transform leads to over-segmentation (a single object is overly split into multiple objects). The traditional watershed uses the local minima of the input image and will characteristically find multiple minima in one object unless they are specified (marker-controlled watershed). An alternative to using the local minima is by a supervised technique called seeded watershed, which supplies single seeds to replace the minima for the objects. Consequently, the accuracy of a seeded watershed algorithm relies on the accuracy of the predefined seeds. In this paper, we present a segmentation approach based on the geometric morphological properties of the ‘landscape’ using curvatures. The curvatures are computed as the eigenvalues of the Shape matrix, producing accurate seeds that also inherit the original shape of their respective cells. We compare with some popular approaches and show the advantage of the proposed method. PMID:28280723
Thermodynamic curvature from the critical point to the triple point.
Ruppeiner, George
2012-08-01
I evaluate the thermodynamic curvature R for fourteen pure fluids along their liquid-vapor coexistence curves, from the critical point to the triple point, using thermodynamic input from the NIST Chemistry WebBook. In this broad overview, R is evaluated in both the coexisting liquid and vapor phases. R is an invariant whose magnitude |R| is a measure of the size of mesoscopic organized structures in a fluid, and whose sign specifies whether intermolecular interactions are effectively attractive (R<0) or repulsive (R>0). I discuss five principles for R in pure fluids: (1) Near the critical point, the attractive part of the interactions forms loose structures of size |R| proportional to the correlation volume ξ(3), and the sign of R is negative. (2) In the vapor phase, there are instances of compact clusters of size |R| formed by the attractive part of the interactions and prevented from collapse by the repulsive part of the interactions, and the sign of R is positive. (3) In the asymptotic critical point regime, the R's in the coexisting liquid and vapor phases are equal to each other, i.e., commensurate. (4) Outside the asymptotic critical-point regime incommensurate R's may be associated with metastability. (5) The compact liquid phase has |R| on the order of the volume of a molecule, with the sign of R being negative for a liquidlike state held together by attractive interactions and the sign of R being positive for a solidlike state held up by repulsive interactions. These considerations amplify and extend the application of thermodynamic curvature in pure fluids.
Assessing Preference for Social Interactions
ERIC Educational Resources Information Center
Clay, Casey J.; Samaha, Andrew L.; Bloom, Sarah E.; Bogoev, Bistra K.; Boyle, Megan A.
2013-01-01
We examined a procedure to assess preference for social interactions in individuals with intellectual and developmental disabilities. Preferences were identified in five individuals using a paired-choice procedure in which participants approached therapists who provided different forms of social interactions. A subsequent tracking test showed that…
Squirrel Foraging Preferences: Gone Nuts?
ERIC Educational Resources Information Center
Darling, Randi A.
2007-01-01
This field exercise examines the feeding preferences of Gray Squirrels ("Sciurus carolinensis"). Students present squirrels with a variety of food types in a cafeteria-style arrangement in order to test hypotheses about foraging preferences. This exercise, which is appropriate for introductory biology, ecology, and animal behavior classes, is…
Temporal Constraint Reasoning With Preferences
NASA Technical Reports Server (NTRS)
Khatib, Lina; Morris, Paul; Morris, Robert; Rossi, Francesca
2001-01-01
A number of reasoning problems involving the manipulation of temporal information can naturally be viewed as implicitly inducing an ordering of potential local decisions involving time (specifically, associated with durations or orderings of events) on the basis of preferences. For example. a pair of events might be constrained to occur in a certain order, and, in addition. it might be preferable that the delay between them be as large, or as small, as possible. This paper explores problems in which a set of temporal constraints is specified, where each constraint is associated with preference criteria for making local decisions about the events involved in the constraint, and a reasoner must infer a complete solution to the problem such that, to the extent possible, these local preferences are met in the best way. A constraint framework for reasoning about time is generalized to allow for preferences over event distances and durations, and we study the complexity of solving problems in the resulting formalism. It is shown that while in general such problems are NP-hard, some restrictions on the shape of the preference functions, and on the structure of the preference set, can be enforced to achieve tractability. In these cases, a simple generalization of a single-source shortest path algorithm can be used to compute a globally preferred solution in polynomial time.
Preferences for Academic Advising Styles
ERIC Educational Resources Information Center
Weir, Susan B.; Dickman, Marcia M.; Fuqua, Dale R.
2005-01-01
This psychometric study was designed to test the feasibility of measuring college students' preferences for developmental and prescriptive advising styles as separate constructs. Part 5 of the Academic Advising Inventory (Winston & Sandor, 1984b) was revised into two independent scales, one for measuring preferences for developmental advising…
Voter-Weighted Environmental Preferences
ERIC Educational Resources Information Center
Bell, Jason; Huber, Joel; Viscusi, W. Kip
2009-01-01
This article examines the political economy of preferences with respect to the environment using a new stated preference survey that presents the first benefit values for national water quality levels. The mean valuation greatly exceeds the median value, as the distribution of valuations is highly skewed. The study couples the survey valuations…
Children Reason about Shared Preferences
ERIC Educational Resources Information Center
Fawcett, Christine A.; Markson, Lori
2010-01-01
Two-year-old children's reasoning about the relation between their own and others' preferences was investigated across two studies. In Experiment 1, children first observed 2 actors display their individual preferences for various toys. Children were then asked to make inferences about new, visually inaccessible toys and books that were described…