The Classroom Animal: Centipedes and Millipedes.

ERIC Educational Resources Information Center

Kramer, David C.

1986-01-01

Compares and contrasts the habitats, behaviors, feeding habits, and physical characteristics of centipedes and millipedes. Offers suggestions for acquiring and maintaining these invertebrates in the classroom. Sample questions for discussion and investigation are also given. (ML)

Nutritional status of four species of giant land snails in Nigeria

PubMed Central

Fagbuaro, O.; Oso, J.A.; Edward, J.B.; Ogunleye, R.F.

2006-01-01

Four species of African giant land snails (Archachatina marginata (ovum) Pfeiffer, Archachatina marginata (saturalis) Philippi, Achatina achatina and Limicolaria spp.) were assessed for their proximate and mineral compositions aimed at establishing their nutritive values on wet weight basis. Analysis of muscle revealed that composition of crude protein varied from 18.66%±0.57% in Limicolaria spp. and 20.56%±0.05% in Archachatina marginata (ovum) Pfeiffer; moisture content was 76.56%±0.04% in Archachatina marginata (ovum) Pfeiffer and 78.68%±0.68% in Limicolaria spp. and ash was 1.34%±0.02% in Achatina achatina and 1.44%±0.01% in Archachatina marginata (ovum) Pfeiffer. These values were statistically different from each other (P<0.05). Carbohydrate and fat content were generally low. Crude fibre was not detected in any of the species. The concentrations of zinc, iron, manganese, magnesium, calcium, phosphorus, sulphur, potassium and sodium in the flesh of the snails were determined. Values of iron, magnesium, calcium, phosphorus, potassium and sodium were consistently high while cobalt, copper and lead were not detected. Snails complement the required trace and minor elements needed for proper growth and development in human being, so it is recommended for regular consumption. PMID:16909467

Rickettsia infection in natural leech populations.

PubMed

Kikuchi, Y; Fukatsu, T

2005-02-01

Field-collected specimens of glossiphoniid leeches, Torix tagoi, Torix tukubana, Hemiclepsis marginata, and Hemiclepsis japonica, were surveyed for Rickettsia infection by using a diagnostic PCR assay. Rickettsia was detected in 96% (69/72) of T. tagoi, 83% (24/29) of T. tukubana, 29% (33/113) of H. marginata, and 0% (0/30) of H. japonica. The frequencies of Rickettsia infection were stably maintained in different seasons. In H. marginata and T. tukubana, distant local populations exhibited remarkably different frequencies of Rickettsia infection. Eggs carried by infected females of T. tagoi and H. marginata were all Rickettsia-positive, indicating nearly 100% vertical transmission. Analysis of 16S rDNA sequences revealed that phylogenetic relationship of the leech-associated Rickettsia reflected the specific and populational divisions of the host leeches. However, circumstantial lines of evidence strongly suggested that horizontal transmission of Rickettsia must have occurred in the ancestors of these leeches. In T. tagoi and T. tukubana, infected individuals were remarkably larger in size than uninfected individuals, wheras in H. marginata, infected and uninfected individuals were almost comparable in size. This study first provides information on ecological aspects of leech-bone endocellular bacteria of the genus Rickettsia. On the basis of these data, we discuss possible mechanisms whereby Rickettsia infection is maintained in natural populations of these leeches in the freshwater ecosystem.

Cyrtodesmus baerti, n. sp., a cryptic millipede from the Galápagos Islands, Ecuador (Diplopoda, Polydesmida, Cyrtodesmidae).

PubMed

Shear, William A; Peck, Stewart B

2018-03-04

Cyrtodesmus baerti, n. sp., previously reported from the Galápagos Islands, Ecuador, as Cyrtodesmus sp., is described, together with notes on the systematics, natural history and morphology of cyrotdesmid millipedes.

Sex in Millipedes: Laboratory Studies on Sexual Selection.

ERIC Educational Resources Information Center

Telford, S. R.; Dangerfield, J. M.

1990-01-01

Activities that consider the courtship behavior and mating patterns of millipedes are presented. The functional significance of a behavior that has evolved through indirect competition between males is discussed. The procedures for seven experiments, results, and interpretations are included. (KR)

Identification of Putative Precursor Genes for the Biosynthesis of Cannabinoid-Like Compound in Radula marginata

PubMed Central

Hussain, Tajammul; Plunkett, Blue; Ejaz, Mahwish; Espley, Richard V.; Kayser, Oliver

2018-01-01

The liverwort Radula marginata belongs to the bryophyte division of land plants and is a prospective alternate source of cannabinoid-like compounds. However, mechanistic insights into the molecular pathways directing the synthesis of these cannabinoid-like compounds have been hindered due to the lack of genetic information. This prompted us to do deep sequencing, de novo assembly and annotation of R. marginata transcriptome, which resulted in the identification and validation of the genes for cannabinoid biosynthetic pathway. In total, we have identified 11,421 putative genes encoding 1,554 enzymes from 145 biosynthetic pathways. Interestingly, we have identified all the upstream genes of the central precursor of cannabinoid biosynthesis, cannabigerolic acid (CBGA), including its two first intermediates, stilbene acid (SA) and geranyl diphosphate (GPP). Expression of all these genes was validated using quantitative real-time PCR. We have characterized the protein structure of stilbene synthase (STS), which is considered as a homolog of olivetolic acid in R. marginata. Moreover, the metabolomics approach enabled us to identify CBGA-analogous compounds using electrospray ionization mass spectrometry (ESI-MS/MS) and gas chromatography mass spectrometry (GC-MS). Transcriptomic analysis revealed 1085 transcription factors (TF) from 39 families. Comparative analysis showed that six TF families have been uniquely predicted in R. marginata. In addition, the bioinformatics analysis predicted a large number of simple sequence repeats (SSRs) and non-coding RNAs (ncRNAs). Our results collectively provide mechanistic insights into the putative precursor genes for the biosynthesis of cannabinoid-like compounds and a novel transcriptomic resource for R. marginata. The large-scale transcriptomic resource generated in this study would further serve as a reference transcriptome to explore the Radulaceae family.

Changes in Synapsin Levels in the Millipede Gymnostreptus olivaceus Schubart, 1944 Exposed to Different Concentrations of Deltamethrin.

PubMed

Francisco, Annelise; Nunes, Pablo H; Nocelli, Roberta C F; Fontanetti, Carmem S

2016-02-01

Millipedes are ecologically important soil organisms and may also be an economically threatening species in rural and urban areas when population outbreaks occur. In order to control infestations commercial formulations of deltamethrin have been commonly applied, even though there are few studies about the effects of such insecticide on millipedes. This paper describes the effects of this insecticide on millipedes showing neurotoxic effects assessed by synapsin labeling and confocal microscopy. Deltamethrin concentrations related to the DL50 of the active ingredient and a field concentration were applied topically in the diplopod Gymnostreptus olivaceus to evaluate the behavior, mortality rate, and synapsin levels in the brain 12, 24, and 48h after contact with deltamethin. The insecticide caused mortality at the higher concentrations employed, in which no change was observed in neurotransmission in the survivors. In contrast, at field concentrations, deltamethrin did not cause any deaths, but triggered significant changes in synapsin levels. The results obtained form the synapsin labeling provide several interpretations suggesting that the isolated application of this tool must be associated with additional tools in order to evaluate biologically induced effects of deltamethrin in an accurate way. In addition, the feasibility of chemical control of millipedes with deltamethrin is questioned.

Biomechanics of selected arborescent and shrubby monocotyledons

PubMed Central

Haushahn, Tobias; Fink, Samuel; Speck, Thomas

2016-01-01

Main aims of the study are a deepened understanding of the mechanically relevant (ultra-)structures and the mechanical behaviour of various arborescent and shrubby monocotyledons and obtaining the structure–function relationships of different structurally conspicuous parts in Dracaena marginata stems. The stems of five different “woody” monocotyledon species were dissected and the mechanical properties of the most noticeable tissues in the five monocotyledons and, additionally, of individual vascular bundles in D. marginata, were tested under tensile stress. Results for Young’s moduli and density of these tissues were assessed as well as the area, critical strain, Young’s modulus and tensile strength of the vascular bundles in Dracaena marginata. These analyses allowed for generating a model for the mechanical interaction of tissues and vascular bundles of the stem in D. marginata as well as filling major “white spots” in property charts for biological materials. Additionally we shortly discuss the potential significance of such studies for the development of branched and unbranched bio-inspired fibre-reinforced materials and structures with enhanced properties. PMID:28144511

Attractiveness of fruit and flower odorants detected by olfactory receptor neurons in the fruit chafer Pachnoda marginata.

PubMed

Larsson, Mattias C; Stensmyr, Marcus C; Bice, Shannon B; Hansson, Bill S

2003-05-01

We studied the attraction of the African fruit chafer Pachnoda marginata Drury (Coleoptera: Scarabaeidae) to banana and 34 synthetic plant compounds previously shown to be detected by P. marginata olfactory receptor neurons. The behavioral studies were carried out in a two-choice olfactometer, where the attraction of beetles to lures and controls was monitored in 30-min intervals during whole days. Monitoring of the attraction over time gave additional information when comparing relative attractiveness of different compounds. Seventeen of the test compounds, primarily phenylic compounds, fruit esters, isovaleric acid, acetoin, and some floral or fruit terpenes, were attractive to P. marginata. Compounds showing no attractiveness included green leaf volatiles, lactones. and several alcohols, but also phenylic compounds and esters. One case of blend synergism was demonstrated, as well as some examples of sexual dimorphism in attraction. The significance of certain compounds and receptor neurons for olfactory-guided behavior of phytophagous scarabs is discussed.

Ribosomal biosynthesis of α-amanitin in Galerina marginata

PubMed Central

Luo, Hong; Hallen-Adams, Heather E.; Scott-Craig, John S.; Walton, Jonathan D.

2014-01-01

Amatoxins, including α-amanitin, are bicyclic octapeptides found in mushrooms (Agaricomycetes, Agaricales) of certain species in the genera Amanita, Galerina, Lepiota, and Conocybe. Amatoxins and the chemically similar phallotoxins are synthesized on ribosomes in Amanita bisporigera, Amanita phalloides, and Amanita ocreata. In order to determine if amatoxins are synthesized by a similar mechanism in another, distantly related mushroom, we obtained genome survey sequence data from a monokaryotic isolate of Galerina marginata, which produces α-amanitin. The genome of G. marginata contains two copies of the α-amanitin gene (GmAMA1-1 and GmAMA1-2). The α-amanitin proprotein sequences of G. marginata (35 amino acids) are highly divergent from AMA1 of A. bisporigera except for the toxin region itself (IWGIGCNP in single-letter amino acid code) and the amino acids immediately upstream (N[A/S]TRLP). G. marginata does not contain any related toxin-encoding sequences besides GmAMA1-1 and GmAMA1-2. DNA from two other α-amanitin-producing isolates of Galerina (G. badipes and G. venenata) hybridized to GmAMA1, whereas DNA from the toxin non-producing species Galerina hybrida did not. Expression of the GmAMA1 genes was induced by growth on low carbon. RNASeq evidence indicates that both copies of GmAMA1 are expressed approximately equally. A prolyl oligopeptidase (POP) is strongly implicated in processing of the cyclic peptide toxins of A. bisporigera and Conocybe apala. G. marginata has two predicted POP genes; one, like AbPOPB of A. bisporigera, is present only in the toxin-producing isolates of Galerina and the other, like AbPOPA of A. bisporigera, is present in all species. Our results indicate that G. marginata biosynthesizes amatoxins on ribosomes by a pathway similar to Amanita species, involving a genetically encoded proprotein of 35 amino acids that is post-translationally processed by a POP. However, due to the high degree of divergence, the evolutionary relationship between AMA1 in the genera Amanita and Galerina is unclear. PMID:22202811

Ancestor–descendant relationships in evolution: origin of the extant pygmy right whale, Caperea marginata

PubMed Central

Tsai, Cheng-Hsiu; Fordyce, R. Ewan

2015-01-01

Ancestor–descendant relationships (ADRs), involving descent with modification, are the fundamental concept in evolution, but are usually difficult to recognize. We examined the cladistic relationship between the only reported fossil pygmy right whale, †Miocaperea pulchra, and its sole living relative, the enigmatic pygmy right whale Caperea marginata, the latter represented by both adult and juvenile specimens. †Miocaperea is phylogenetically bracketed between juvenile and adult Caperea marginata in morphologically based analyses, thus suggesting a possible ADR—the first so far identified within baleen whales (Cetacea: Mysticeti). The †Miocaperea–Caperea lineage may show long-term morphological stasis and, in turn, punctuated equilibrium. PMID:25589485

Growth responses and accumulation of soluble sugars in Inga marginata Wild. (Fabaceae) subjected to flooding under contrasting light conditions.

PubMed

Bender, B; Capellesso, E S; Lottici, M E; Sentkovski, J; Mielniczki-Pereira, A A; Rosa, L M G; Sausen, T L

2017-01-01

Flood events in riparian forests of southern Brazil, can be characterized as unpredictable and of low magnitude with an average duration of less than 15 days. Inga marginata is an evergreen tree which grows in Southeast South America on a wide range of environments, including riparian forests. In this paper, the interactive effects of the light environment and soil flooding on morphological parameters of I. marginata were examined. Seedlings were acclimated in two contrasting light conditions: sun or shade for 30 days. Sun and shade plants were subjected to soil flooding for two periods; five or 15 days. After 5 days, the interaction between flooding and light did not affect growth, chlorophyll content and dry mass or the root-shoot ratio. After 15 days, flooded plants from the sunny treatment had a lower shoot dry mass compared to control sun plants and flooded plants from the shaded treatment. Moreover, the higher dry mass observed for shade plants compared to sun plants, following flooding, can also be directly associated with a higher content of soluble sugars. Shade plants of I. marginata showed a greater acclimation to soil waterlogging. This acclimation appears to be associated with a larger accumulation of soluble sugars compared to non-flooded plants. The responses observed on the shade plants appear to be decisive to indicate the use of I. marginata in degraded areas.

Topical anti-inflammatory activity of a monofloral honey of Mimosa scabrella provided by Melipona marginata during winter in southern Brazil.

PubMed

Borsato, Débora M; Prudente, Arthur S; Döll-Boscardin, Patrícia M; Borsato, Aurélio V; Luz, Cynthia F P; Maia, Beatriz H L N S; Cabrini, Daniela A; Otuki, Michel F; Miguel, Marilis D; Farago, Paulo V; Miguel, Obdulio G

2014-07-01

Melipona marginata is an endangered species of stingless bee from Brazil that produces honey with particular physicochemical features and a remarkable exotic flavor. To the best of our knowledge, this is the first report devoted to exploring the medicinal potential of this honey. Thus, the aim of this paper was to investigate the potential anti-inflammatory activity of honey extract from M. marginata on skin inflammation. The honey sample was classified as a monofloral honey of Mimosa scabrella. The presence of 11 phenolic compounds as kaempferol and caffeic acid was detected using the high-performance liquid chromatography-electrospray ionization-tandem mass spectrometry (HPLC-UV-ESI-MS) method. The anti-inflammatory activity was measured using a 12-O-tetradecanoylphorbol-13-acetate-induced ear edema model of inflammation in mice. The topical application of the M. marginata honey extract (1.0 mg/ear) was able to reduce ear edema with an inhibitory effect of 54 ± 5%. This extract decreased the myeloperoxidase activity in 75 ± 3%, which suggests a lower leucocyte infiltration that was confirmed by histological analysis. This extract also provided a reduction of 55 ± 14% in the production of reactive oxygen species. This anti-inflammatory activity could be due to a synergic effect of the phenolic compounds identified in the honey sample. Taken together, these results open up new possibilities for the use of M. marginata honey extract in skin disorders.

Convergent Evolution of Unique Morphological Adaptations to a Subterranean Environment in Cave Millipedes (Diplopoda)

PubMed Central

Golovatch, Sergei; Wesener, Thomas; Tian, Mingyi

2017-01-01

Animal life in caves has fascinated researchers and the public alike because of the unusual and sometimes bizarre morphological adaptations observed in numerous troglobitic species. Despite their worldwide diversity, the adaptations of cave millipedes (Diplopoda) to a troglobitic lifestyle have rarely been examined. In this study, morphological characters were analyzed in species belonging to four different orders (Glomerida, Polydesmida, Chordeumatida, and Spirostreptida) and six different families (Glomeridae, Paradoxosomatidae, Polydesmidae, Haplodesmidae, Megalotylidae, and Cambalopsidae) that represent the taxonomic diversity of class Diplopoda. We focused on the recently discovered millipede fauna of caves in southern China. Thirty different characters were used to compare cave troglobites and epigean species within the same genera. A character matrix was created to analyze convergent evolution of cave adaptations. Males and females were analyzed independently to examine sex differences in cave adaptations. While 10 characters only occurred in a few phylogenetic groups, 20 characters were scored for in all families. Of these, four characters were discovered to have evolved convergently in all troglobitic millipedes. The characters that represented potential morphological cave adaptations in troglobitic species were: (1) a longer body; (2) a lighter body color; (3) elongation of the femora; and (4) elongation of the tarsi of walking legs. Surprisingly, female, but not male, antennae were more elongated in troglobites than in epigean species. Our study clearly shows that morphological adaptations have evolved convergently in different, unrelated millipede orders and families, most likely as a direct adaptation to cave life. PMID:28178274

Convergent Evolution of Unique Morphological Adaptations to a Subterranean Environment in Cave Millipedes (Diplopoda).

PubMed

Liu, Weixin; Golovatch, Sergei; Wesener, Thomas; Tian, Mingyi

2017-01-01

Animal life in caves has fascinated researchers and the public alike because of the unusual and sometimes bizarre morphological adaptations observed in numerous troglobitic species. Despite their worldwide diversity, the adaptations of cave millipedes (Diplopoda) to a troglobitic lifestyle have rarely been examined. In this study, morphological characters were analyzed in species belonging to four different orders (Glomerida, Polydesmida, Chordeumatida, and Spirostreptida) and six different families (Glomeridae, Paradoxosomatidae, Polydesmidae, Haplodesmidae, Megalotylidae, and Cambalopsidae) that represent the taxonomic diversity of class Diplopoda. We focused on the recently discovered millipede fauna of caves in southern China. Thirty different characters were used to compare cave troglobites and epigean species within the same genera. A character matrix was created to analyze convergent evolution of cave adaptations. Males and females were analyzed independently to examine sex differences in cave adaptations. While 10 characters only occurred in a few phylogenetic groups, 20 characters were scored for in all families. Of these, four characters were discovered to have evolved convergently in all troglobitic millipedes. The characters that represented potential morphological cave adaptations in troglobitic species were: (1) a longer body; (2) a lighter body color; (3) elongation of the femora; and (4) elongation of the tarsi of walking legs. Surprisingly, female, but not male, antennae were more elongated in troglobites than in epigean species. Our study clearly shows that morphological adaptations have evolved convergently in different, unrelated millipede orders and families, most likely as a direct adaptation to cave life.

Ancestor-descendant relationships in evolution: origin of the extant pygmy right whale, Caperea marginata.

PubMed

Tsai, Cheng-Hsiu; Fordyce, R Ewan

2015-01-01

Ancestor-descendant relationships (ADRs), involving descent with modification, are the fundamental concept in evolution, but are usually difficult to recognize. We examined the cladistic relationship between the only reported fossil pygmy right whale, †Miocaperea pulchra, and its sole living relative, the enigmatic pygmy right whale Caperea marginata, the latter represented by both adult and juvenile specimens. †Miocaperea is phylogenetically bracketed between juvenile and adult Caperea marginata in morphologically based analyses, thus suggesting a possible ADR-the first so far identified within baleen whales (Cetacea: Mysticeti). The †Miocaperea-Caperea lineage may show long-term morphological stasis and, in turn, punctuated equilibrium. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

The origins of the giant pill-millipedes from Madagascar (Diplopoda: Sphaerotheriida: Arthrosphaeridae).

PubMed

Wesener, Thomas; Raupach, Michael J; Sierwald, Petra

2010-12-01

Giant pill-millipedes (order Sphaerotheriida) are large-bodied millipedes without poison glands which can roll-up into a complete ball. Their disconnected area of distribution spanning South Africa, Madagascar, India, SE Asia, Australia and New Zealand makes them interesting model organisms for biogeographic studies. The here presented phylogeny is based on a molecular dataset covering all areas of distribution with a special focus on Madagascar, where some species of giant pill-millipedes show island gigantism, reaching the size of a baseball. For our study, two mitochondrial genes (partial 16S rRNA and COI) as well as the complete nuclear 18S rDNA were sequenced. While many recent vertebrate studies hint that the ancestors of the recent Malagasy fauna crossed the >350 km wide Mozambique Channel several times, no such crossing was discovered in the Sphaerotheriida. For the first time in a molecular phylogenetic study of soil arthropods, a Madagascar-India group, the family Arthrosphaeridae, is recovered, hinting to a Gondwanan origin of the Sphaerotheriida. The Malagasy-Indian family Arthrosphaeridae forms a monophyletic, statistically well-supported group in all obtained trees. The giant pill-millipedes from Madagascar are paraphyletic because the Malagasy genus Sphaeromimus is the sister-taxon of the Indian Arthrosphaera. In Sphaeromimus, an ecotone shift occurred only once: the spiny forest species Sphaeromimus musicus forms the sister-clade to the species collected in rainforests and littoral rainforests. The two species of the Malagasy genus Zoosphaerium which express island gigantism form a monophyletic group in some trees, but these trees lack good statistical support. Deeper nodes inside the Sphaerotheriida, like the position of the Australian genera Procyliosoma and Epicyliosoma, the Southeast Asian family Zephroniidae and the South African genus Sphaerotherium could not be resolved. This study is the first genetic study inside the order Sphaerotheriida and provides a proper basis for future molecular biogeographic studies in millipedes and soil organisms from Madagascar. Copyright © 2010 Elsevier Inc. All rights reserved.

Insect herbivores associated with an evergreen tree Goniorrhachis marginata Taub. (Leguminosae: Caesalpinioideae) in a tropical dry forest.

PubMed

Silva, J O; Neves, F S

2014-08-01

Goniorrhachis marginata Taub. (Leguminosae: Caesalpinioideae) is a tree species found in Brazilian tropical dry forests that retain their leaves during the dry season. That being, we addressed the following question: i) How do insect diversity (sap-sucking and chewing), leaf herbivory and defensive traits (tannin and leaf sclerophylly) vary on the evergreen tree species G. marginata between seasons? The abundance of sap-sucking insects was higher in the dry season than in the rainy season. However, we did not verify any difference in the species richness and abundance of chewing insects between seasons. Leaf herbivory was higher in the rainy season, whereas leaf sclerophylly was higher in the dry season. However, herbivory was not related to sclerophylly. Insect herbivores likely decrease their folivory activity during the dry season due to life history patterns or changes in behaviour, possibly entering diapause or inactivity during this period. Therefore, G. marginata acts as a likely keystone species, serving as a moist refuge for the insect fauna during the dry season in tropical dry forest, and the presence of this evergreen species is crucial to conservation strategies of this threatened ecosystem.

Habitats and seasonality of riparian-associated millipedes in southwest Washington, USA

Treesearch

Alex D. Foster; Shannon M. Claeson

2011-01-01

Millipedes are a diverse and ancient group of poorly known terrestrial organisms. While recent advances in their taxonomy and distribution have occurred in some areas of the world, our knowledge about the distribution and ecology of many taxa in the Pacific Northwest is limited. We review the ecology of taxa we observed and present results from a field study relating...

Hydrogen peroxide as a new defensive compound in "benzoyl cyanide" producing polydesmid millipedes

NASA Astrophysics Data System (ADS)

Kuwahara, Yasumasa; Yamaguchi, Takuya; Ichiki, Yayoi; Tanabe, Tsutomu; Asano, Yasuhisa

2017-04-01

Hydrogen peroxide was newly and simultaneously demonstrated with well-known hydrogen cyanide as a component of defensive secretions of "benzoyl cyanide" producing polydesmid millipedes. Presence of hydrogen peroxide was successively evidenced by Trinder reagent's spray with colorless as well as oily smears of defensive secretions containing benzoyl cyanide and hydrogen cyanide by alkaline picrate paper treatment. Linear correlation was demonstrated between quantities of hydrogen peroxide and benzoyl cyanide. By qualitative assay, seven benzoyl cyanide containing polydesmidans (six species of adults and one species of a nymph at stadium I) tested positive to Trinder reagent, indicative of the presence of hydrogen peroxide (together with hydrogen cyanide), while two cyanogenic species without benzoyl cyanide exhibited negative responses to the reagent. Two types of millipedes were elucidated as species of cyanogenic Polydesmida.

Decentralized control mechanism underlying interlimb coordination of millipedes.

PubMed

Kano, Takeshi; Sakai, Kazuhiko; Yasui, Kotaro; Owaki, Dai; Ishiguro, Akio

2017-04-04

Legged animals exhibit adaptive and resilient locomotion through interlimb coordination. The long-term goal of this study is to clarify the relationship between the number of legs and the inherent decentralized control mechanism for interlimb coordination. As a preliminary step, the study focuses on millipedes as they represent the species with the greatest number of legs among various animal species. A decentralized control mechanism involving local force feedback was proposed based on the qualitative findings of behavioural experiments in which responses to the removal of part of the terrain and leg amputation were observed. The proposed mechanism was implemented in a developed millipede-like robot to demonstrate that the robot can adapt to the removal of the part of the terrain and leg amputation in a manner similar to that in behavioural experiments.

Hydrogen peroxide as a new defensive compound in "benzoyl cyanide" producing polydesmid millipedes.

PubMed

Kuwahara, Yasumasa; Yamaguchi, Takuya; Ichiki, Yayoi; Tanabe, Tsutomu; Asano, Yasuhisa

2017-04-01

Hydrogen peroxide was newly and simultaneously demonstrated with well-known hydrogen cyanide as a component of defensive secretions of "benzoyl cyanide" producing polydesmid millipedes. Presence of hydrogen peroxide was successively evidenced by Trinder reagent's spray with colorless as well as oily smears of defensive secretions containing benzoyl cyanide and hydrogen cyanide by alkaline picrate paper treatment. Linear correlation was demonstrated between quantities of hydrogen peroxide and benzoyl cyanide. By qualitative assay, seven benzoyl cyanide containing polydesmidans (six species of adults and one species of a nymph at stadium I) tested positive to Trinder reagent, indicative of the presence of hydrogen peroxide (together with hydrogen cyanide), while two cyanogenic species without benzoyl cyanide exhibited negative responses to the reagent. Two types of millipedes were elucidated as species of cyanogenic Polydesmida.

Earthworm invasion in North America: Food resource competition affects native millipede survival and invasive earthworm reproduction

Treesearch

Bruce Snyder; Mac Callaham; Christopher Lowe; Paul Hendrix

2013-01-01

The invasive non-native earthworm Amynthas agrestis (Goto and Hatai, 1899) has recently been documented invading forests of the Appalachian Mountains in the southeastern United States. This epigeic earthworm decreases the depth of organic soil horizons, and this may play a role in the decrease of millipede richness and abundance associated with A. agrestis invasion. To...

Complete mitochondrial genomes of two flat-backed millipedes by next-generation sequencing (Diplopoda, Polydesmida)

PubMed Central

Dong, Yan; Zhu, Lixin; Bai, Yu; Ou, Yongyue; Wang, Changbao

2016-01-01

Abstract A lack of mitochondrial genome data from myriapods is hampering progress across genetic, systematic, phylogenetic and evolutionary studies. Here, the complete mitochondrial genomes of two millipedes, Asiomorpha coarctata Saussure, 1860 (Diplopoda: Polydesmida: Paradoxosomatidae) and Xystodesmus sp. (Diplopoda: Polydesmida: Xystodesmidae) were assembled with high coverage using Illumina sequencing data. The mitochondrial genomes of the two newly sequenced species are circular molecules of 15,644 bp and 15,791 bp, within which the typical mitochondrial genome complement of 13 protein-coding genes, 22 tRNAs and two ribosomal RNA genes could be identified. The mitochondrial genome of Asiomorpha coarctata is the first complete sequence in the family Paradoxosomatidae (Diplopoda: Polydesmida) and the gene order of the two flat-backed millipedes is novel among known myriapod mitochondrial genomes. Unique translocations have occurred, including inversion of one half of the two genomes with respect to other millipede genomes. Inversion of the entire side of a genome (trnF-nad5-trnH-nad4-nad4L, trnP, nad1-trnL2-trnL1-rrnL-trnV-rrnS, trnQ, trnC and trnY) could constitute a common event in the order Polydesmida. Last, our phylogenetic analyses recovered the monophyletic Progoneata, subphylum Myriapoda and four internal classes. PMID:28138271

Distribution of millipedes along an altitudinal gradient in the south of Lake Teletskoye, Altai Mts, Russia (Diplopoda)

PubMed Central

Nefedieva, Julia S.; Nefediev, Pavel S.; Sakhnevich, Miroslava B.; Dyachkov, Yuri V.

2015-01-01

Abstract The distribution of millipedes along an altitudinal gradient in the south of Lake Teletskoye, Altai, Russia based on new samples from the Kyga Profile sites, as well as on partly published and freshly revised material (Mikhaljova et al. 2007, 2008, 2014, Nefedieva and Nefediev 2008, Nefediev and Nefedieva 2013, Nefedieva et al. 2014), is established. The millipede diversity is estimated to be at least 15 species and subspecies from 10 genera, 6 families and three orders. The bulk of species diversity is confined both to low- and mid-mountain chern taiga forests and high-mountain shrub tundras, whereas the highest numbers, reaching up to 130 ind./m², is shown in subalpine Pinus sibirica sparse growths. Based on clustering studied localities on species diversity similarity two groups of sites are defined: low-mountain sites and subalpine sparse growths of Pinus sibirica ones. PMID:26257540

Millipedes and centipedes in German greenhouses (Myriapoda: Diplopoda, Chilopoda)

PubMed Central

2014-01-01

Abstract A review is given of all the literature records of millipedes and centipedes that have been found in German greenhouses together with additional records for 29 such sites. Species lists are given for 46 greenhouses investigated throughout Germany. Thirty-five diplopod and 18 chilopod species were found to occur in greenhouses, of which 15 (3 Chilopoda, 12 Diplopoda) are restricted to this type of habitat. First records for Germany include Anadenobolus monilicornis (Porat, 1876), Epinannolene cf. trinidadensis Chamberlin, 1918, Epinannolene sp., Mesoiulus gridellii Strasser, 1934, Leptogoniulus sorornus (Butler, 1876), Rhinotus purpureus (Pocock, 1894), Cryptops doriae Pocock, 1891, Lamyctes coeculus (Brölemann, 1889) and Tygarrup javanicus (Attems, 1907). The millipedes Oxidus gracilis (C. L. Koch, 1847) and Amphitomeus attemsi (Schubart, 1934) and the centipedes Lithobius forficatus (Linnaeus, 1758) and Cryptops hortensis (Donovan, 1810) are the species most frequently found in greenhouses. PMID:24891823

Trade-off in investment between dispersal and ingestion capability in phytophagous insects and its ecological implications.

PubMed

Huberty, Andrea F; Denno, Robert F

2006-06-01

In population ecology, dispersal plays a fundamental role, but is potentially costly. Traditionally, studies of phenotypic trade-offs involving dispersal focus on resource allocation differences between flight and reproduction. However, investments in dispersal may also result in reduced allocation to other "third-party traits" (e.g. compensatory feeding) that are not directly associated with reproduction. Such traits remain largely uninvestigated for any phytophagous insect despite their importance for performance and survival. Using two wing-dimorphic, phloem-feeding planthoppers, Prokelisia dolus and Prokelisia marginata that differ dramatically in dispersal abilities, we sought evidence for a trade-off between investments in dispersal (flight apparatus) and ingestion capability (allocation to the esophageal musculature governing ingestion). Dispersal allows species to meet nutrient demands by moving to higher-quality resources. In contrast, enhanced investment in esophageal musculature increases ingestion capacity and allows phloem feeders to compensate for deteriorating plant nutrition on site. Our objectives were to compare differences in flight and feeding investment between P. dolus and P. marginata and between the wing forms of both species, and to compare ingestion capacity between the two species and wing forms. Morphometric and gravimetric measures of investment in flight versus feeding indicate that the sedentary P. dolus allocates more muscle mass to feeding whereas P. marginata invests more heavily in flight. Likewise, brachypters invest more in feeding and less in flight than macropters. The greater esophageal investment in P. dolus is associated with enhanced ingestion capacity compared to P. marginata. As a consequence, P. dolus is better equipped to meet on-site nutrient demands when faced with deteriorating plant quality than P. marginata, which must migrate elsewhere to do so. Notably, such third-party trade-offs place constraints on how insect herbivores cope with changing resources and set the stage for fundamental differences in population dynamics.

Arthropod phylogenetics in light of three novel millipede (myriapoda: diplopoda) mitochondrial genomes with comments on the appropriateness of mitochondrial genome sequence data for inferring deep level relationships.

PubMed

Brewer, Michael S; Swafford, Lynn; Spruill, Chad L; Bond, Jason E

2013-01-01

Arthropods are the most diverse group of eukaryotic organisms, but their phylogenetic relationships are poorly understood. Herein, we describe three mitochondrial genomes representing orders of millipedes for which complete genomes had not been characterized. Newly sequenced genomes are combined with existing data to characterize the protein coding regions of myriapods and to attempt to reconstruct the evolutionary relationships within the Myriapoda and Arthropoda. The newly sequenced genomes are similar to previously characterized millipede sequences in terms of synteny and length. Unique translocations occurred within the newly sequenced taxa, including one half of the Appalachioria falcifera genome, which is inverted with respect to other millipede genomes. Across myriapods, amino acid conservation levels are highly dependent on the gene region. Additionally, individual loci varied in the level of amino acid conservation. Overall, most gene regions showed low levels of conservation at many sites. Attempts to reconstruct the evolutionary relationships suffered from questionable relationships and low support values. Analyses of phylogenetic informativeness show the lack of signal deep in the trees (i.e., genes evolve too quickly). As a result, the myriapod tree resembles previously published results but lacks convincing support, and, within the arthropod tree, well established groups were recovered as polyphyletic. The novel genome sequences described herein provide useful genomic information concerning millipede groups that had not been investigated. Taken together with existing sequences, the variety of compositions and evolution of myriapod mitochondrial genomes are shown to be more complex than previously thought. Unfortunately, the use of mitochondrial protein-coding regions in deep arthropod phylogenetics appears problematic, a result consistent with previously published studies. Lack of phylogenetic signal renders the resulting tree topologies as suspect. As such, these data are likely inappropriate for investigating such ancient relationships.

Peptide Macrocyclization Catalyzed by a Prolyl Oligopeptidase Involved in α-Amanitin Biosynthesis

DOE PAGES

Luo, Hong; Hong, Sung-Yong; Sgambelluri, R.  Michael; ...

2014-12-04

Amatoxins are ribosomally encoded and posttranslationally modified peptides that account for the majority of fatal mushroom poisonings of humans. A representative amatoxin is the bicyclic octapeptide α-amanitin, formed via head-to-tail macrocyclization, which is ribosomally biosynthesized as a 35-amino acid propeptide in Amanita bisporigera and in the distantly related mushroom Galerina marginata. Although members of the prolyl oligopeptidase (POP) family of serine proteases have been proposed to play a role in α-amanitin posttranslational processing, the exact mechanistic details are not known. In this paper, we show that a specific POP (GmPOPB) is required for toxin maturation in G. marginata. Recombinant GmPOPBmore » catalyzed two nonprocessive reactions: hydrolysis at an internal Pro to release the C-terminal 25-mer from the 35-mer propeptide and transpeptidation at the second Pro to produce the cyclic octamer. Finally on the other hand, we show that GmPOPA, the putative housekeeping POP of G. marginata, behaves like a conventional POP.« less

Insular species swarm goes underground: two new troglobiont Cylindroiulus millipedes from Madeira (Diplopoda: Julidae).

PubMed

Reboleira, Ana Sofia P S; Enghoff, Henrik

2014-04-04

Two new species of the genus Cylindroiulus Verhoeff, 1894, C. julesvernei and C. oromii, are described from the subterranean ecosystem of Madeira Island, Portugal. Species are illustrated with photographs and diagrammatic drawings. The new species belong to the Cylindroiulus madeirae-group, an insular species swarm distributed in the archipelagos of Madeira and the Canary Islands. We discuss the differences between the new species and their relatives and present information on the subterranean environment of Madeira. An updated overview of the subterranean biodiversity of millipedes in Macaronesia is also provided.

The Dufour’s gland and the cuticle in the social wasp Ropalidia marginata contain the same hydrocarbons in similar proportions

PubMed Central

Mitra, A.; Gadagkar, R.

2014-01-01

Abstract Queens in many social insects are known to maintain their status through chemicals (pheromones) and cuticular hydrocarbons and have been the focus of many investigations that have looked at the chemicals involved in queen signaling. In the primitively eusocial wasp Ropalidia marginata Lepeletier (Hymenoptera: Vespidae), the Dufour’s gland has been shown to be involved in queen signaling, and Dufour’s gland hydrocarbons have been found to be correlated with fertility. Hence, this study analyzed the cuticle of R. marginata along with the Dufour’s gland in order to compare their hydrocarbon profiles. The results show that the Dufour’s gland and cuticle contained the same set of hydrocarbons in similar proportions (for the majority of compounds). Patterns pertaining to fertility signaling present in cuticular hydrocarbons were also similar to those present in the Dufour’s gland hydrocarbons. Furthermore, the haemolymph contained the same hydrocarbons as found in the Dufour’s gland and cuticle in similar proportions, thereby providing an explanation as to why the hydrocarbon profiles of the Dufour’s gland and cuticle are correlated. PMID:25373156

New observations - with older ones reviewed - on mass migrations in millipedes based on a recent outbreak on Hachijojima (Izu Islands) of the polydesmid diplopod (Chamberlinius hualienensis, Wang 1956): Nothing appears to make much sense.

PubMed

Meyer-Rochow, Victor Benno

2015-05-18

Mass aggregations and migrations of millipedes despite numerous attempts to find causes for their occurrences are still an enigma. They have been reported from both southern and northern hemisphere countries, from highlands and lowlands of both tropical and temperate regions and they can involve species belonging to the orders Julida and Spirobolida, Polydesmida and Glomerida. According to the main suggestions put forward in the past, mass occurrences in Diplopoda occur: (1) because of a lack of food and a population increase beyond sustainable levels; (2) for the purpose of reproduction and in order to locate suitable oviposition sites; (3) to find overwintering or aestivation sites; (4) because of habitat disruption and changes in the local environment; (5) as a consequence of weather conditions the year (or winter and spring) before. A recent outbreak (November 2014) of a mass migration of the polydesmid Chamberlinius hualienensis Wang 1956 on the Japanese Izu Island of Hachijojima 300 km to the south of Tokyo gave this author an opportunity to review the existing literature on millipede mass migrations and to carry out additional observations on the phenomenon in the field as well as the laboratory. Hitherto unreported heavy infestations with phoretic deutonymphs of the mite Histiostoma sp. as well as dense populations of internal rhabditid nematodes (Oscheius cf. necromena and an unidentified species of the genus Fictor), suggest that infestations of this kind could be necromenic and either have been a contributing factor for the mass migration or been a consequence of so many individuals occurring together at close proximity. It is concluded that mass migrations and aggregations in millipedes do not have one common cause, but represent phenomena that often are seasonally recurring events and appear identical in their outcome, but which have evolved as responses to different causes in different millipede taxa and therefore need to be examined on a case-to-case basis.

Two Flat-Backed Polydesmidan Millipedes from the Miocene Chiapas-Amber Lagerstätte, Mexico

PubMed Central

Riquelme, Francisco; Hernández-Patricio, Miguel; Martínez-Dávalos, Arnulfo; Rodríguez-Villafuerte, Mercedes; Montejo-Cruz, Maira; Alvarado-Ortega, Jesús; Ruvalcaba-Sil, José L.; Zúñiga-Mijangos, Luis

2014-01-01

Two species of fossil polydesmidan millipedes (Diplopoda: Polydesmida) embedded in amber are described from Miocene strata near Simojovel, in the Chiapas Highlands, Mexico. Maatidesmus paachtun gen. et sp. nov., placed into Chelodesmidae Cook, 1895, and Anbarrhacus adamantis gen. et sp. nov., assigned in the family Platyrhacidae Pocock, 1895. Morphological data from fossil specimens have been recovered using 3D X-ray micro-computed tomography and regular to infrared-reflected microscopy. Both fossil species are recognizable as new primarily but not exclusively, by collum margin modification and remarkable paranotal and metatergite dorsal sculpture. PMID:25162220

Two flat-backed polydesmidan millipedes from the Miocene Chiapas-amber Lagerstätte, Mexico.

PubMed

Riquelme, Francisco; Hernández-Patricio, Miguel; Martínez-Dávalos, Arnulfo; Rodríguez-Villafuerte, Mercedes; Montejo-Cruz, Maira; Alvarado-Ortega, Jesús; Ruvalcaba-Sil, José L; Zúñiga-Mijangos, Luis

2014-01-01

Two species of fossil polydesmidan millipedes (Diplopoda: Polydesmida) embedded in amber are described from Miocene strata near Simojovel, in the Chiapas Highlands, Mexico. Maatidesmus paachtun gen. et sp. nov., placed into Chelodesmidae Cook, 1895, and Anbarrhacus adamantis gen. et sp. nov., assigned in the family Platyrhacidae Pocock, 1895. Morphological data from fossil specimens have been recovered using 3D X-ray micro-computed tomography and regular to infrared-reflected microscopy. Both fossil species are recognizable as new primarily but not exclusively, by collum margin modification and remarkable paranotal and metatergite dorsal sculpture.

The comparison of structure and anticancer activity in vitro of polysaccharides from brown algae Alaria marginata and A. angusta.

PubMed

Usoltseva Menshova, Roza V; Anastyuk, Stanislav D; Shevchenko, Natalia M; Zvyagintseva, Tatiana N; Ermakova, Svetlana P

2016-11-20

Laminaran and three fucoidan fractions were obtained from the brown alga Alaria marginata. Alaria angusta, studied earlier by us, has the same polysaccharide composition. Galactofucan AmF3 from A. marginata has a main chain of →3)-α-l-Fucp-(2,4-SO3(-))-(1→residues, similar to galactofucan from A. angusta. However, the structure of the branches in fucoidan AmF3 can differ from those in the fucoidan from A. angusta. The following fragments were identified in AmF3: HexA-(1→2)-Fuc, HexA-(1→2)-Gal, Gal-(1→4)-HexA, Fuc-(1→2)-Gal-6-SO3(-), Fuc-4-SO3(-)-(1→6)-Gal, Gal-(1→2)-Gal-2-SO3(-), Gal-4-SO3(-)-(1 →6)-Gal, Gal-4-SO3(-)-(1→3)-Fuc-(1→3)-Fuc, Fuc-4-SO3(-)-(1→6)-Gal-(1→4)-Gal, Gal-(1→4)-Gal-(1→3)-Fuc, Gal-2-SO3(-)-(1→4)-Gal-(1→4)-Gal, Gal-(1→4)-Gal-6-SO3(-)-(1→2)-Gal. Chains of galactose residues (DP up to 9) were found in AmF3 fucoidan. The laminarans, galactofucans and their derivatives from both algae exhibited no cytotoxicity in vitro. Polysaccharides from A. angusta were more effective against colony formation of HT-29 cells, while those from A. marginata had a greater effect on T-47D cells. Sulfated and desulfated fucoidans possessed weak antitumor activity using SK-MEL-28 cells. Copyright © 2016 Elsevier Ltd. All rights reserved.

Ontogenetic shape changes and sexual dimorphism in Aegla marginata Bond-Buckup and Buckup, 1994.

PubMed

Adam, Carolina L; Marochi, Murilo Z; Masunari, Setuko

2018-05-14

A study on relative growth, sexual dimorphism and ontogenetic trajectory was carried out in a population of the aeglidAegla marginata coming from Barrinha River, Iguape River Basin, Tunas do Paraná, Paraná State, Brazil. The size the of morphological sexual maturity was estimated for males and females. The analysis of sexual dimorphism and ontogenetic trajectory were performed using geometric morphometric technique. Males reach maturity with 10.58 mm of carapace length (CL) and females with 10.38 mm CL. Sexual size dimorphism was only visible among adults, with males reaching larger sizes. This is probably related to the reproductive strategy of males. However, sexual shape dimorphism was found for both juveniles and adults: the posterior region of the carapace was wider in females. As the contrast of this feature was stronger in adults, it can be considered that large abdomen is advantageous for egg incubation. The allometric trajectories of juveniles presented similar directions, becoming divergent during the adult phase. The shape variation inA. marginataoccurred gradually throughout its development, with no abrupt transformation upon reaching sexual maturity. The reproductive adaptation is the main reason for the morphological variation within populations ofA. marginata.

Discovery of a glowing millipede in California and the gradual evolution of bioluminescence in Diplopoda.

PubMed

Marek, Paul E; Moore, Wendy

2015-05-19

The rediscovery of the Californian millipede Xystocheir bistipita surprisingly reveals that the species is bioluminescent. Using molecular phylogenetics, we show that X. bistipita is the evolutionary sister group of Motyxia, the only genus of New World bioluminescent millipedes. We demonstrate that bioluminescence originated in the group's most recent common ancestor and evolved by gradual, directional change through diversification. Because bioluminescence in Motyxia has been experimentally demonstrated to be aposematic, forewarning of the animal's cyanide-based toxins, these results are contrary to aposematic theory and empirical evidence that a warning pattern cannot evolve gradually in unpalatable prey. However, gradual evolution of a warning pattern is plausible if faint light emission served another function and was co-opted as an aposematic signal later in the diversification of the genus. Luminescence in Motyxia stem-group taxa may have initially evolved to cope with reactive oxygen stress triggered by a hot, dry environment and was repurposed for aposematism by high-elevation crown-group taxa colonizing new habitats with varying levels of predation. The discovery of bioluminescence in X. bistipita and its pivotal phylogenetic location provides insight into the independent and repeated evolution of bioluminescence across the tree of life.

A Müllerian mimicry ring in Appalachian millipedes.

PubMed

Marek, Paul E; Bond, Jason E

2009-06-16

Few biological phenomena provide such an elegant and straightforward example of evolution by natural selection as color mimicry among unrelated organisms. By mimicking the appearance of a heavily defended aposematic species, members of a second species gain protection from predators and, potentially, enhanced fitness. Mimicking a preexisting warning advertisement is economical because a potentially costly novel one can be avoided; simultaneously, the addition of more aposematic individuals enhances the overall warning effect. The better-known mimetic systems comprise tropical taxa, but here, we show a remarkable example of color mimicry in 7 species of blind, cyanide-generating millipedes endemic to the Appalachian Mountains of temperate North America. Because these millipedes lack eyes, there is no sexual selection or intraspecific signaling for coloration, providing an ideal system for mimicry studies. We document a Müllerian symbiosis where unrelated species vary in color and pattern over geographical space but appear identical where they co-occur. By using spectral color data, estimations of evolutionary history, and detailed field observations of species abundance, we test 4 predictions of Müllerian mimicry theory and begin to unravel the story of an elaborate mimetic diversification in the forests of Appalachia.

A Müllerian mimicry ring in Appalachian millipedes

PubMed Central

Marek, Paul E.; Bond, Jason E.

2009-01-01

Few biological phenomena provide such an elegant and straightforward example of evolution by natural selection as color mimicry among unrelated organisms. By mimicking the appearance of a heavily defended aposematic species, members of a second species gain protection from predators and, potentially, enhanced fitness. Mimicking a preexisting warning advertisement is economical because a potentially costly novel one can be avoided; simultaneously, the addition of more aposematic individuals enhances the overall warning effect. The better-known mimetic systems comprise tropical taxa, but here, we show a remarkable example of color mimicry in 7 species of blind, cyanide-generating millipedes endemic to the Appalachian Mountains of temperate North America. Because these millipedes lack eyes, there is no sexual selection or intraspecific signaling for coloration, providing an ideal system for mimicry studies. We document a Müllerian symbiosis where unrelated species vary in color and pattern over geographical space but appear identical where they co-occur. By using spectral color data, estimations of evolutionary history, and detailed field observations of species abundance, we test 4 predictions of Müllerian mimicry theory and begin to unravel the story of an elaborate mimetic diversification in the forests of Appalachia. PMID:19487663

Peristaltic Wave Locomotion and Shape Morphing with a Millipede Inspired System

NASA Astrophysics Data System (ADS)

Spinello, Davide; Fattahi, Javad S.

2017-08-01

We present the mechanical model of a bio-inspired deformable system, modeled as a Timoshenko beam, which is coupled to a substrate by a system of distributed elements. The locomotion action is inspired by the coordinated motion of coupling elements that mimic the legs of millipedes and centipedes, whose leg-to-ground contact can be described as a peristaltic displacement wave. The multi-legged structure is crucial in providing redundancy and robustness in the interaction with unstructured environments and terrains. A Lagrangian approach is used to derive the governing equations of the system that couple locomotion and shape morphing. Features and limitations of the model are illustrated with numerical simulations.

An annotated checklist of the Chilopoda and Diplopoda (Myriapoda) of the Abrau Peninsula, northwestern Caucasus, Russia

PubMed Central

Semenyuk, Irina I.; Tuf, Ivan H.

2016-01-01

Abstract Background The Abrau Peninsula is located in northwestern Caucasus between the cities of Novorossiysk and Anapa, Krasnodar Province, Russia. This paper contains an annotated checklist of the Chilopoda and Diplopoda inhabiting the Abrau Peninsula. New information The fauna of the Abrau Peninsula comprises 17 centipede (4 orders) and 16 millipede (6 orders) species. Henia taurica, hitherto known only from the Crimea, has now been reported from several localities in the studied region. The study also reveals two possibly new millipede species. Statistical analyses showed that habitat preferences of myriapod species within the Abrau Peninsula are caused by species geographic distribution pattern and microbiotope preferences. PMID:27346949

Daily and annual patterns of thermoregulation in painted turtles (Chrysemys picta marginata) living in a thermally variable marsh in Northern Michigan.

PubMed

Rowe, John W; Converse, Paul E; Clark, David L

2014-02-01

The capacity for an ectothermic reptile to thermoregulate has implications for many components of its life history. Over two years, we studied thermoregulation in a population of Midland painted turtles (Chrysemys picta marginata) in a shallow, thermally variable wetland during summer in Northern Michigan. Mean body temperature (Tb) of free-ranging turtles was greater in 2008 (25.8 °C) than in 2010 (19.7 °C). Laboratory determined thermoregulatory set point (Tset) ranged from 25 °C (Tset-min) to 31 °C (Tset-max) and was lower during the fall (17-26 °C). Deviations of Tb distributions from field measured operative temperatures (Te) and indices of thermoregulation indicated that C. picta marginata were capable of a limited degree of thermoregulation. Operative temperatures and thermal quality (de=|Tset-min-Te| and |Te-Tset-max|) cycled daily with maximal thermal quality occurring during late morning and late afternoon. The accuracy of thermoregulation (db=|Tset-min-Tb| and |Tb-Tset-max|) was maximal (db values were minimal) as Tb declined and traversed Tset during the late afternoon-early evening hours and was higher on cloudy days than on sunny days because relatively low Te values decreased the number of Tb values that were above Tset. Our index of thermal exploitation (Ex=frequency of Tb observations within Tset) was 36%, slightly lower than that reported for an Ontario population of C. picta marginata. Regression of db (thermal accuracy) on de (thermal quality) indicated that turtles invested more in thermoregulation when thermal quality was low and when water levels were high than when they were low. There were no intersexual differences in mean Tb throughout the year but females had relatively high laboratory determined Tb values in the fall, perhaps reflecting the importance of maintaining ovarian development prior to winter. Copyright © 2013 Elsevier Ltd. All rights reserved.

A sacrificial millipede altruistically protects its swarm using a drone blood enzyme, mandelonitrile oxidase

PubMed Central

Ishida, Yuko; Kuwahara, Yasumasa; Dadashipour, Mohammad; Ina, Atsutoshi; Yamaguchi, Takuya; Morita, Masashi; Ichiki, Yayoi; Asano, Yasuhisa

2016-01-01

Soldiers of some eusocial insects exhibit an altruistic self-destructive defense behavior in emergency situations when attacked by large enemies. The swarm-forming invasive millipede, Chamberlinius hualienensis, which is not classified as eusocial animal, exudes irritant chemicals such as benzoyl cyanide as a defensive secretion. Although it has been thought that this defensive chemical was converted from mandelonitrile, identification of the biocatalyst has remained unidentified for 40 years. Here, we identify the novel blood enzyme, mandelonitrile oxidase (ChuaMOX), which stoichiometrically catalyzes oxygen consumption and synthesis of benzoyl cyanide and hydrogen peroxide from mandelonitrile. Interestingly the enzymatic activity is suppressed at a blood pH of 7, and the enzyme is segregated by membranes of defensive sacs from mandelonitrile which has a pH of 4.6, the optimum pH for ChuaMOX activity. In addition, strong body muscle contractions are necessary for de novo synthesis of benzoyl cyanide. We propose that, to protect its swarm, the sacrificial millipede also applies a self-destructive defense strategy—the endogenous rupturing of the defensive sacs to mix ChuaMOX and mandelonitrile at an optimum pH. Further study of defensive systems in primitive arthropods will pave the way to elucidate the evolution of altruistic defenses in the animal kingdom. PMID:27265180

A sacrificial millipede altruistically protects its swarm using a drone blood enzyme, mandelonitrile oxidase.

PubMed

Ishida, Yuko; Kuwahara, Yasumasa; Dadashipour, Mohammad; Ina, Atsutoshi; Yamaguchi, Takuya; Morita, Masashi; Ichiki, Yayoi; Asano, Yasuhisa

2016-06-06

Soldiers of some eusocial insects exhibit an altruistic self-destructive defense behavior in emergency situations when attacked by large enemies. The swarm-forming invasive millipede, Chamberlinius hualienensis, which is not classified as eusocial animal, exudes irritant chemicals such as benzoyl cyanide as a defensive secretion. Although it has been thought that this defensive chemical was converted from mandelonitrile, identification of the biocatalyst has remained unidentified for 40 years. Here, we identify the novel blood enzyme, mandelonitrile oxidase (ChuaMOX), which stoichiometrically catalyzes oxygen consumption and synthesis of benzoyl cyanide and hydrogen peroxide from mandelonitrile. Interestingly the enzymatic activity is suppressed at a blood pH of 7, and the enzyme is segregated by membranes of defensive sacs from mandelonitrile which has a pH of 4.6, the optimum pH for ChuaMOX activity. In addition, strong body muscle contractions are necessary for de novo synthesis of benzoyl cyanide. We propose that, to protect its swarm, the sacrificial millipede also applies a self-destructive defense strategy-the endogenous rupturing of the defensive sacs to mix ChuaMOX and mandelonitrile at an optimum pH. Further study of defensive systems in primitive arthropods will pave the way to elucidate the evolution of altruistic defenses in the animal kingdom.

Mud and silk in the dark: A new type of millipede moulting chamber and first observations on the maturation moult in the order Callipodida.

PubMed

Reboleira, Ana Sofia P S; Enghoff, Henrik

2016-05-01

The postembryonic development of millipedes includes a series of stadia separated by moults, a process known as anamorphosis. The moulting process and especially the moulting into maturity, i.e., with fully developed copulatory organs, remains unknown for most millipede species. We have kept specimens of Lusitanipus alternans (Verhoeff, 1893) in the laboratory for one year and studied its moulting process, including the first study of the maturation moult in the order Callipodida. Unlike the typical silk cocoon reported for other callipodidans, this species builds a new type of solid moulting chamber, using the available substrate reinforced by a silken web. We present the detailed ultrastructure of the moulting chamber and silk. It takes five days to build the moulting chamber and between 29 (female) and 35 (male) days to shed the exuviae. The male maturation moult is preceded by an evagination of a gonopodal sac between the 6th and 7th body rings, in which the gonopods are developed. Females evaginated completely their vulval sacs, retracting them after shedding the exuviae. Vulval sac size seems to increase with the progressive reduction of the second pair of legs. Copyright © 2016 Elsevier Ltd. All rights reserved.

Pattern or process? Evaluating the peninsula effect as a determinant of species richness in coastal dune forests

PubMed Central

Olivier, Pieter I.; van Aarde, Rudi J.

2017-01-01

The peninsula effect predicts that the number of species should decline from the base of a peninsula to the tip. However, evidence for the peninsula effect is ambiguous, as different analytical methods, study taxa, and variations in local habitat or regional climatic conditions influence conclusions on its presence. We address this uncertainty by using two analytical methods to investigate the peninsula effect in three taxa that occupy different trophic levels: trees, millipedes, and birds. We surveyed 81 tree quadrants, 102 millipede transects, and 152 bird points within 150 km of coastal dune forest that resemble a habitat peninsula along the northeast coast of South Africa. We then used spatial (trend surface analyses) and non-spatial regressions (generalized linear mixed models) to test for the presence of the peninsula effect in each of the three taxa. We also used linear mixed models to test if climate (temperature and precipitation) and/or local habitat conditions (water availability associated with topography and landscape structural variables) could explain gradients in species richness. Non-spatial models suggest that the peninsula effect was present in all three taxa. However, spatial models indicated that only bird species richness declined from the peninsula base to the peninsula tip. Millipede species richness increased near the centre of the peninsula, while tree species richness increased near the tip. Local habitat conditions explained species richness patterns of birds and trees, but not of millipedes, regardless of model type. Our study highlights the idiosyncrasies associated with the peninsula effect—conclusions on the presence of the peninsula effect depend on the analytical methods used and the taxon studied. The peninsula effect might therefore be better suited to describe a species richness pattern where the number of species decline from a broader habitat base to a narrow tip, rather than a process that drives species richness. PMID:28376096

The cuticular hydrocarbons profiles in the stingless bee Melipona marginata reflect task-related differences.

PubMed

Ferreira-Caliman, M J; Nascimento, F S; Turatti, I C; Mateus, S; Lopes, N P; Zucchi, R

2010-07-01

Members of social insect colonies employ a large variety of chemical signals during their life. Of these, cuticular hydrocarbons are of primary importance for social insects since they allow for the recognition of conspecifics, nestmates and even members of different castes. The objectives of this study were (1) to characterize the variation of the chemical profiles among workers of the stingless bee Melipona marginata, and (2) to investigate the dependence of the chemical profiles on the age and on the behavior of the studied individuals. The results showed that cuticular hydrocarbon profiles of workers were composed of alkanes, alkenes and alkadienes that varied quantitatively and qualitatively according to function of workers in the colony. Copyright 2010 Elsevier Ltd. All rights reserved.

The South Asian millipede genus Chondromorpha Silvestri, 1897 (Diplopoda, Polydesmida, Paradoxosomatidae, Sulciferini): redescriptions and synonymies.

PubMed

Sankaran, Pradeep M; Sebastian, Pothalil A

2017-11-16

The South Asian millipede genus Chondromorpha Silvestri, 1897 is diagnosed and its relationship with Parchondromorpha Jeekel, 1980 is established. The species C. atopus (Chamberlin, 1920) and C. indus (Chamberlin, 1920), as well as the subspecies C. kelaarti kelaarti (Humbert, 1865), C. kelaarti longipes (Verhoeff, 1936) and C. kelaarti valparaiensis (Carl, 1932) are recognised as junior synonyms of C. kelaarti (Humbert, 1865), thereby reducing the total number of Chondromorpha spp. in India to four: C. kaimura Turk, 1947, C. kelaarti, C. mammifera Attems, 1936 and C. severini Silvestri, 1897 (the type-species). Two species, C. kelaarti and C. mammifera, are redescribed and illustrated in detail. All four Indian Chondromorpha spp. are keyed, and the known distribution records of C. kelaarti and C. mammifera are mapped.

Is geography an accurate predictor of evolutionary history in the millipede family Xystodesmidae?

PubMed Central

Marek, Paul E.

2017-01-01

For the past several centuries, millipede taxonomists have used the morphology of male copulatory structures (modified legs called gonopods), which are strongly variable and suggestive of species-level differences, as a source to understand taxon relationships. Millipedes in the family Xystodesmidae are blind, dispersal-limited and have narrow habitat requirements. Therefore, geographical proximity may instead be a better predictor of evolutionary relationship than morphology, especially since gonopodal anatomy is extremely divergent and similarities may be masked by evolutionary convergence. Here we provide a phylogenetics-based test of the power of morphological versus geographical character sets for resolving phylogenetic relationships in xystodesmid millipedes. Molecular data from 90 species-group taxa in the family were included in a six-gene phylogenetic analysis to provide the basis for comparing trees generated from these alternative character sets. The molecular phylogeny was compared to topologies representing three hypotheses: (1) a prior classification formulated using morphological and geographical data, (2) hierarchical groupings derived from Euclidean geographical distance, and (3) one based solely on morphological data. Euclidean geographical distance was not found to be a better predictor of evolutionary relationship than the prior classification, the latter of which was the most similar to the molecular topology. However, all three of the alternative topologies were highly divergent (Bayes factor >10) from the molecular topology, with the tree inferred exclusively from morphology being the most divergent. The results of this analysis show that a high degree of morphological convergence from substantial gonopod shape divergence generated spurious phylogenetic relationships. These results indicate the impact that a high degree of morphological homoplasy may have had on prior treatments of the family. Using the results of our phylogenetic analysis, we make several changes to the classification of the family, including transferring the rare state-threatened species Sigmoria whiteheadi Shelley, 1986 to the genus Apheloria Chamberlin, 1921—a relationship not readily apparent based on morphology alone. We show that while gonopod differences are a premier source of taxonomic characters to diagnose species pairwise, the traits should be viewed critically as taxonomic features uniting higher levels. PMID:29038750

Interlocking-based attachment during locomotion in the beetle Pachnoda marginata (Coleoptera, Scarabaeidae)

PubMed Central

Bußhardt, Philipp; Kunze, Daniel; Gorb, Stanislav N.

2014-01-01

The attachment function of tibial spurs and pretarsal claws in the beetle Pachnoda marginata (Coleoptera, Scarabaeidae) during locomotion was examined in this study. First, we measured the angle, at which the beetles detached from substrates with different roughness. At a surface roughness of 12 μm and higher, intact animals were able to cling to a completely tilted platform (180°). Second, we estimated the forces the beetles could exert in walking on smooth and rough cylinders of different diameters, on a plane and also between two plates. To elucidate the role of the individual structures, we ablated them consecutively. We found tibial spurs not to be in use in walking on flat substrates. On some of the curved substrates, ablation of tibial spurs caused an effect. A clear effect of tibial spurs was revealed in walking between two plates. Thus, these structures are probably used for generating propulsion in narrowed spaces. PMID:25385502

Humoral responses of broiler chickens challenged with NDV following supplemental treatment with extracts of Aloe vera, Alma millsoni, Ganoderma lucidum and Archachatina marginata.

PubMed

Ojiezeh, Tony I; Eghafona, Nosahkare'Odeh

2015-01-01

The significance of nutritional supplements for immunity has been documented. Locally sourced extracts used in alternative medicine were studied to determine their potential effects on antibody production and humoral responses in viral challenged birds. Three hundred and eighty birds were distributed into 19 groups of 20 birds each. Following acclimatization for 16 days, they were fed with standard broilers feed and water ad libitum. Group A was supplemented with Aloe vera (AV) extract, group B was given Alma millsoni (AM) extract, group C was given Archachatina marginata (AMS) extract and group D was given Ganoderma lucidum (GL) extract, and group E was the control group. Extract concentrations of 50 mg, 100 mg and 150 mg were given to three subsets of each treatment group for 30 days. Birds were then challenged with intramuscular administration of 0.2 ml of 50% Embryo Lethal Dose of saline suspension of the challenge strain of Newcastle Disease Virus (NDV) on the 30(th) day, and were examined for clinical signs and symptoms. Serum from venous blood was used for antibody and immunological assay. Aloe vera at 50 µg and A. millsoni extracts supplementations yielded a significant antibody titre (p < 0.001). The difference within the AMS, GL and AV groups and the control group was not statistically significant (p < 0.05). Unlike the extract of Ganoderma and A. marginata, pretreatment with A. millsoni extract and a lower dosage of Aloe vera enhanced the ability to mount humoral responses against viral infection in broiler chickens.

Factors influencing the abundance of pests in production fields and rates of interception of Dracaena marginata imported from Costa Rica.

PubMed

Hidalgo, Eduardo; Benjamin, Tamara; Casanoves, Fernando; Sadof, Clifford

2013-10-01

Importation of live nursery plants, like Dracaena marginata Lamoureux (Ruscaceae), can provide a significant pathway for the entry of foliar pests from overseas into the United States. We studied the abundance of foliar pests of quarantine importance found on Costa Rican-grown D. marginata. These include five genera of leafhoppers (Heteroptera: Cicadellidae, Oncometopia, Caldweliola, Diestostema, Cypona, and Empoasca), Florida red scale (Heteroptera: Disapididae, Chrysomphalus aoinidum (L.)), katydids (Orthoptera: Tettigoniidae), and a snail (Succinea costarricana von Martens (Gastropoda, Stylommatophora, Succineidae)). In our first study, we examined the rationale behind size restrictions on Dracaena cuttings imported into the United States from Costa Rica. When comparing plant size, no differences were found in the abundance of quarantined pests on small (15-46 cm), medium (46-81 cm), and large (81-152 cm) propagules. In a second study, we estimated monthly abundances of pests in production plots for 1 yr to determine their relationship to rates of interception at U.S. ports. In any given month, < 6% of the marketable shoots standing in the field were infested with at least one quarantine pest. There was no relationship between the average monthly frequencies of pest detection in the field and in U.S. inspection ports. Pest detections increased during the 1 mo when average monthly shipments were abnormally high. Our data suggest that off-shore postprocessing efforts to remove pest-infested material from the market stream need to be adjusted to accommodate sharp increases in the volume of shipped plants.

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Revision of the Taiwanese millipede genus Chamberlinius Wang, 1956, with descriptions of two new species and a reclassification of the tribe Chamberlinini (Diplopoda, Polydesmida, Paradoxosomatidae, Paradoxosomatinae).

PubMed

Chen, Chao-Chun; Golovatch, Sergei I; Chang, Hsueh-Wen; Chen, Shyh-Hwang

2011-05-13

The millipede genus Chamberlinius is basically confined to Taiwan, with only one of the four known species presumably introduced to southern Japan. Both previously known species are redescribed, based on new material: Chamberlinius hualienensis Wang, 1956 (the type species) and Chamberlinius piceofasciatus (Gressitt, 1941), the latter being a new subjective senior synonym of Chamberlinius shengmui Wang, 1957, syn. n. Two further congeners are described as new: Chamberlinius pessiorsp. n. and Chamberlinius sublaevussp. n. The genus is re-diagnosed, all of its four species are keyed, and their distributions mapped. The tribe Chamberlinini is reclassified and, based on gonopod traits, shown to comprise the following five genera: Chamberlinius Wang, 1956, Haplogonosoma Brölemann, 1916, Riukiupeltis Verhoeff, 1939, Aponedyopus Verhoeff, 1939 and Geniculodesmus Chen, Golovatch and Chang, 2008.

Architectural plasticity in young Eucalyptus marginata on restored bauxite mines and adjacent natural forest in south-western Australia.

PubMed

Bleby, Timothy M; Colquhoun, Ian J; Adams, Mark A

2009-08-01

The aboveground architecture of Eucalyptus marginata (Jarrah) was investigated in chronosequences of young trees (2.5, 5 and 10 m height) growing in a seasonally dry climate in a natural forest environment with intact soils, and on adjacent restored bauxite mine sites on soils with highly modified A and B horizons above an intact C horizon. Compared to forest trees, trees on restored sites were much younger and faster growing, with straighter, more clearly defined main stems and deeper, narrower crowns containing a greater number of branches that were longer, thinner and more vertically angled. Trees on restored sites also had a higher fraction of biomass in leaves than forest trees, as indicated by 20-25% thicker leaves, 30-70% greater leaf area, 10-30% greater leaf area to sapwood area ratios and 5-30% lesser branch Huber values. Differences in crown architecture and biomass distribution were consistent with putatively greater soil-water, nutrient and light availability on restored sites. Our results demonstrate that under the same climatic conditions, E. marginata displays a high degree of plasticity of aboveground architecture in response to the net effects of resource availability and soil environment. These differences in architecture are likely to have functional consequences in relation to tree hydraulics and growth that, on larger scales, is likely to affect the water and carbon balances of restored forest ecosystems. This study highlights substrate as a significant determinant of tree architecture in water-limited environments. It further suggests that the architecture of young trees on restored sites may need to change again if they are to survive likely longer-term changes in resource availability.

Humoral responses of broiler chickens challenged with NDV following supplemental treatment with extracts of Aloe vera, Alma millsoni, Ganoderma lucidum and Archachatina marginata

PubMed Central

Eghafona, Nosahkare'Odeh

2015-01-01

Aim of the study The significance of nutritional supplements for immunity has been documented. Locally sourced extracts used in alternative medicine were studied to determine their potential effects on antibody production and humoral responses in viral challenged birds. Method Three hundred and eighty birds were distributed into 19 groups of 20 birds each. Following acclimatization for 16 days, they were fed with standard broilers feed and water ad libitum. Group A was supplemented with Aloe vera (AV) extract, group B was given Alma millsoni (AM) extract, group C was given Archachatina marginata (AMS) extract and group D was given Ganoderma lucidum (GL) extract, and group E was the control group. Extract concentrations of 50 mg, 100 mg and 150 mg were given to three subsets of each treatment group for 30 days. Birds were then challenged with intramuscular administration of 0.2 ml of 50% Embryo Lethal Dose of saline suspension of the challenge strain of Newcastle Disease Virus (NDV) on the 30th day, and were examined for clinical signs and symptoms. Serum from venous blood was used for antibody and immunological assay. Results Aloe vera at 50 µg and A. millsoni extracts supplementations yielded a significant antibody titre (p < 0.001). The difference within the AMS, GL and AV groups and the control group was not statistically significant (p < 0.05). Conclusion Unlike the extract of Ganoderma and A. marginata, pretreatment with A. millsoni extract and a lower dosage of Aloe vera enhanced the ability to mount humoral responses against viral infection in broiler chickens. PMID:26648773

Contrasting physiological responses of two co-occurring eucalypts to seasonal drought at restored bauxite mine sites.

PubMed

Szota, Christopher; Farrell, Claire; Koch, John M; Lambers, Hans; Veneklaas, Erik J

2011-10-01

This study describes the physiological response of two co-occurring tree species (Eucalyptus marginata and Corymbia calophylla) to seasonal drought at low- and high-quality restored bauxite mine sites in south-western Australia. Seasonal changes in photosynthesis (A), stomatal conductance (g(s)), leaf water potential (ψ), leaf osmotic potential (ψ), leaf relative water content (RWC) and pressure-volume analysis were captured over an 18-month field study to (i) determine the nature and severity of physiological stress in relation to site quality and (ii) identify any physiological differences between the two species. Root system restriction at the low-quality site reduced maximum rates of gas exchange (g(s) and A) and increased water stress (midday ψ and daily RWC) in both species during drought. Both species showed high stomatal sensitivity during drought; however, E. marginata demonstrated a higher dehydration tolerance where ψ and RWC fell to -3.2 MPa and 73% compared with -2.4 MPa and 80% for C. calophylla. Corymbia calophylla showed lower g(s) and higher ψ and RWC during drought, indicating higher drought tolerance. Pressure-volume curves showed that cell-wall elasticity of E. marginata leaves increased in response to drought, while C. calophylla leaves showed lower osmotic potential at zero turgor in summer than in winter, indicating osmotic adjustment. Both species are clearly able to tolerate seasonal drought at hostile sites; however, by C. calophylla closing stomata earlier in the drought cycle, maintaining a higher water status during drought and having the additional mechanism of osmotic adjustment, it may have a greater capacity to survive extended periods of drought.

The cochlea of the enigmatic pygmy right whale Caperea marginata informs mysticete phylogeny.

PubMed

Park, Travis; Marx, Felix G; Fitzgerald, Erich M G; Evans, Alistair R

2017-06-01

The pygmy right whale, Caperea marginata, is the least understood extant baleen whale (Cetacea, Mysticeti). Knowledge on its basic anatomy, ecology, and fossil record is limited, even though its singular position outside both balaenids (right whales) and balaenopteroids (rorquals + grey whales) gives Caperea a pivotal role in mysticete evolution. Recent investigations of the cetacean cochlea have provided new insights into sensory capabilities and phylogeny. Here, we extend this advance to Caperea by describing, for the first time, the inner ear of this enigmatic species. The cochlea is large and appears to be sensitive to low-frequency sounds, but its hearing limit is relatively high. The presence of a well-developed tympanal recess links Caperea with cetotheriids and balaenopteroids, rather than balaenids, contrary to the traditional morphological view of a close Caperea-balaenid relationship. Nevertheless, a broader sample of the cetotheriid Herpetocetus demonstrates that the presence of a tympanal recess can be variable at the specific and possibly even the intraspecific level. © 2017 Wiley Periodicals, Inc.

Crispoic acid, a new compound from Laelia marginata (Orchidaceae), and biological evaluations against parasites, human cancer cell lines and Zika virus.

PubMed

Belloto, Andrezza C; Souza, Gredson K; Perin, Paula C; Schuquel, Ivania T A; Santin, Silvana M O; Chiavelli, Lucas U R; Garcia, Francielle P; Kaplum, Vanessa; Rodrigues, Jean H S; Scariot, Débora B; Delvecchio, Rodrigo; Machado-Ferreira, Erik; Santana Aguiar, Renato; Soares, Carlos A G; Nakamura, Celso V; Pomini, Armando M

2017-11-08

The phytochemical study of Laelia marginata (Lindl.) L. O. Williams (Orchidaceae) led to the isolation of a new natural product named crispoic acid (1), together with six other known compounds (2-7). The new natural product was identified as a dimer of eucomic acid and was structurally characterised based upon 1D and 2D NMR and HRMS data. Biological assays with plant crude extract, fractions and isolated compounds were performed against two human cancer cell lines (Hela and Siha), and the tropical parasites Trypanosoma cruzi and Leishmania (Leishmania) amazonensis. The phenantrenoid 9,10-dihydro-4-methoxyphenanthren-2,7-diol 2 was active against Hela and Siha cells (CC 50 5.86 ± 0.19 and 20.78 ± 2.72 μg/mL, respectively). Sub-lethal concentrations of the flavone rhamnazin 4 were not able to rescue the viability of the Vero cells infected by Zika virus.

Porosity and test ultrastructure of costate and non-costate Bulimina species

NASA Astrophysics Data System (ADS)

Grunert, Patrick; Piller, Werner E.

2017-04-01

SEM-based investigations of porosity and test wall ultrastructure of Recent costate and non-costate Bulimina species reveal significant differences in pore diameter, pore density and ultrastructural architecture between these two groups. Costate tests of B. inflata and B. mexicana display low pore density, a large pore diameter, and test walls built by a single type of columnar ultrastructural elements. In contrast, non-costate tests of B. aculeata and B. marginata are characterized by significantly higher pore density, smaller pore diameter, and an additional type of ultrastructural elements formed by oblique, tabular crystallite units which encase the pore channels. We interpret the observed combination of traits in B. aculeata and B. marginata as a set of adaptations to poorly oxygenated, intermediate to deep infaunal microhabitats which they typically occupy today. The evolutionary trend towards increased pore density in this group seemingly involved a major modification of the biomineralisation process resulting in the lining of pore channels with a specific type of ultrastructural element to ensure stability of the densely perforated test.

A new species of Illacme Cook & Loomis, 1928 from Sequoia National Park, California, with a world catalog of the Siphonorhinidae (Diplopoda, Siphonophorida).

PubMed

Marek, Paul E; Krejca, Jean K; Shear, William A

2016-01-01

Members of the family Siphonorhinidae Cook, 1895 are thread-like eyeless millipedes that possess an astounding number of legs, including one individual with 750. Due to their cryptic lifestyle, rarity in natural history collections, and sporadic study over the last century, the family has an unclear phylogenetic placement, and intrafamilial relationships remain unknown. Here we report the discovery of a second species of Illacme , a millipede genus notable for possessing the greatest number of legs of any known animal on the planet. Illacme tobini sp. n. is described from a single male collected in a cave in Sequoia National Park, California, USA. After 90 years since the description of Illacme , the species represents a second of the genus in California. Siphonorhinidae now includes Illacme Cook & Loomis, 1928 (two species, USA), Kleruchus Attems, 1938 (one species, Vietnam), Nematozonium Verhoeff, 1939 (one species, South Africa) and Siphonorhinus Pocock, 1894 (eight species, India, Indonesia, Madagascar, Vietnam).

A new species of Illacme Cook & Loomis, 1928 from Sequoia National Park, California, with a world catalog of the Siphonorhinidae (Diplopoda, Siphonophorida)

PubMed Central

Marek, Paul E.; Krejca, Jean K.; Shear, William A.

2016-01-01

Abstract Members of the family Siphonorhinidae Cook, 1895 are thread-like eyeless millipedes that possess an astounding number of legs, including one individual with 750. Due to their cryptic lifestyle, rarity in natural history collections, and sporadic study over the last century, the family has an unclear phylogenetic placement, and intrafamilial relationships remain unknown. Here we report the discovery of a second species of Illacme, a millipede genus notable for possessing the greatest number of legs of any known animal on the planet. Illacme tobini sp. n. is described from a single male collected in a cave in Sequoia National Park, California, USA. After 90 years since the description of Illacme, the species represents a second of the genus in California. Siphonorhinidae now includes Illacme Cook & Loomis, 1928 (two species, USA), Kleruchus Attems, 1938 (one species, Vietnam), Nematozonium Verhoeff, 1939 (one species, South Africa) and Siphonorhinus Pocock, 1894 (eight species, India, Indonesia, Madagascar, Vietnam). PMID:27833431

Our Zoo to You

ERIC Educational Resources Information Center

Wickless, Mimi; Brooks, David W.; Abuloum, Amjad; Mancuso, Brian; Heng-Moss, Tiffany M.; Mayo, Lois

2003-01-01

An innovative zoo outreach program, Our Zoo to You, places zoo animals in local classrooms for extended observation periods. With guidance and support from zoo staff, students are able to safely experience a variety of animals, including geckos, snakes, legless lizards, horned toads, ringneck doves, ferrets, hedgehogs, African brown millipedes,…

The genus Ivalia Jacoby 1887 (Coleoptera: Chrysomelidae: Galerucinae: Alticini) of the mount Kinabalu, Sabah, Malaysia

USDA-ARS?s Scientific Manuscript database

The following new species of Ivalia Jacoby 1887 are described from the mount Kinabalu (Sabah, Malaysia): I. besar, I. biasa, I. fulvomaculata, I. haruka, I. marginata, I. minutissima, I. nigrofasciata, I. pseudostriolata, I. rubrorbiculata, I. striolata. Chabria kinabalensis Bryant 1938 is transferr...

Parasitoid aggregation and the stabilization of a salt marsh host-parasitoid system

Treesearch

John D. Reeve; James T. Cronin; Donald R. Strong

1994-01-01

We examine a salt marsh host-parasitoid system, consisting of the planthopper Prokelisia marginata and its egg parasitoid Anagrus delicatus, for evidence of stabilizing parasitoid behavior. We first determine if there is sufficient parasitoid aggregation to potentially stabilize the Prokelisia-Anagrus interactions, using methods that infer parasitoid behavior from the...

Vector specificity of Trypanosoma catostomi and its infectivity to freshwater fishes.

PubMed

Jones, S R; Woo, P T

1992-02-01

Trypanosoma catostomi was found in 36.2% of 558 white suckers (Catostomus commersoni) from Ontario, Canada. The abundance of Actinobdella inequiannulata was 35% (68 leeches/197 suckers examined for leeches). The susceptibility of 3 species of leeches (Hemiclepsis marginata, Desserobdella phalera, and A. inequiannulata) and 7 species of fishes (C. commersoni, Amia calva, Anguilla rostrata, Ictalurus nebulosus, Oncorhynchus mykiss, Perca flavescens, and Esox lucius) to infection with T. catostomi was examined. Metatrypanosomes were found in the crop and proboscis sheath of 13 of 21 A. inequiannulata and in the crop of 10 of 12 H. marginata and 1 of 21 D. phalera. Only flagellates from A. inequiannulata were infective to C. commersoni. Cultured T. catostomi infected C. commersoni and A. calva but not any other fish species. Laboratory-reared C. commersoni were more susceptible than wild-caught specimens. Cultured Trypanosoma phaleri did not infect its natural host, A. calva. Host specificity should be established experimentally before a specific diagnosis is made. Cultures may be useful in simulating factors that affect development in the vector.

Magnetic resonance imaging reveals functional anatomy and biomechanics of a living dragon tree

PubMed Central

Hesse, Linnea; Masselter, Tom; Leupold, Jochen; Spengler, Nils; Speck, Thomas; Korvink, Jan Gerrit

2016-01-01

Magnetic resonance imaging (MRI) was used to gain in vivo insight into load-induced displacements of inner plant tissues making a non-invasive and non-destructive stress and strain analysis possible. The central aim of this study was the identification of a possible load-adapted orientation of the vascular bundles and their fibre caps as the mechanically relevant tissue in branch-stem-attachments of Dracaena marginata. The complex three-dimensional deformations that occur during mechanical loading can be analysed on the basis of quasi-three-dimensional data representations of the outer surface, the inner tissue arrangement (meristem and vascular system), and the course of single vascular bundles within the branch-stem-attachment region. In addition, deformations of vascular bundles could be quantified manually and by using digital image correlation software. This combination of qualitative and quantitative stress and strain analysis leads to an improved understanding of the functional morphology and biomechanics of D. marginata, a plant that is used as a model organism for optimizing branched technical fibre-reinforced lightweight trusses in order to increase their load bearing capacity. PMID:27604526

Planktonic foraminifers and radiolarians from the Coniacian-santonian deposits of the Mt. Ak-Kaya, Crimean Mountains, Ukraine

NASA Astrophysics Data System (ADS)

Korchagin, O. A.; Bragina, L. G.; Bragin, N. Yu.

2012-02-01

The first data on the distribution of planktonic foraminifers and radiolarians in the Mt. Ak-Kaya section, the central Crimean Mountains, are considered. According to the analyzed distribution of foraminifers, the Upper Cretaceous deposits of the section are subdivided into three biostratigraphic units: the Marginotruncana austinensis-Globotruncana desioi (presumably upper Coniacian), Sigalia carpatica (uppermost Coniacian-lower Santonian), and Contusotruncana fornicata-Marginotruncana marginata (upper Santonian) beds. Subdivisions substantiated by distribution of radiolarians are the Alievium praegallowayi-Crucella plana (upper Coniacian-lower Santonian), Alievium gallowayi-Crucella espartoensis (the upper Santonian excluding its uppermost part), and Dictyocephalus (Dictyocryphalus) (?) legumen-Spongosaturninus parvulus (the uppermost Santonian) beds. The Contusotruncana fornicata-Marginotruncana marginata Beds are concurrent to the middle part of the Marsupites laevigatus Zone coupled with the Marsupites testudinarius Zone (the uppermost Santonian). The Alievium gallowayi-Crucella espartoensis Beds are correlative with the upper part of the Alievium gallowayi Zone in the Californian radiolarian zonation. The cooccurring assemblages of planktonic foraminifers and radiolarians provide a possibility to correlate the Coniacian-Santonian deposits within the Crimea-Caucasus region.

Development of defoliating insects and their preferences for host plants under varying temperatures in a subtropical evergreen forest in eastern China

NASA Astrophysics Data System (ADS)

Jing, Jun; Xia, Lingdan; Li, Kai

2017-06-01

The aim of this work was to understand the development of defoliating insects and their preferences for host plants under varying temperatures in a subtropical evergreen broad-leaved forest in China. We measured the main developmental parameters of three typical defoliating insects (i.e., Ourapteryx ebuleata szechuana, Biston marginata, and Euproctis angulata) and their preferences for five host plants at temperatures from 16°C to 31°C at 3°C intervals in the Tiantong National Forest Research station in eastern China. The results showed the following. 1) An appropriate rise in temperature increases the survival rate with an increase in the number of offspring. The developmental durations for these three insects were shortened, and pupal weight increased with an increase in temperature. 2) A shift in the preference for host plants for these three insects was observedat elevated temperatures. They all preferred to feed on Schima superba and Castanopsis sclerophylla at elevated temperatures, showing an opposite response to the other three plants. The daily leaf consumption of the three insects was positively correlated with their feeding preference, with more leaves being consumed from the plants they preferred. 3) For O. ebuleata szechuana larvae, daily leaf consumption initially increased and then decreased with increasing temperatures. In contrast, Biston marginata and Euproctis angulata larvae consumed more leaves at elevated temperatures. The feeding preferences of O. ebuleata szechuana and Biston marginata were more sensitive to changing temperatures than that of Euproctis angulata laevae. We concluded that increased numbers of offspring and generations, pupal weights, and a shift in preference to two plants for these three defoliating insects might lead to severe damage to these two plants which would enhance the fragmentation and decrease the stability of the forest communities under changing temperatures. Meanwhile, the variations in the responses of defoliating insects to the changing temperatures should be taken into consideration for the pest management of forests to adapt to the changing climate.

Applicator Training Manual for: Industrial, Institutional, Structural and Health-Related Pest Control.

ERIC Educational Resources Information Center

Christensen, Christian M.; Scheibner, R. A.

This manual gives descriptions and diagrams for identification of the following types of pests: four species of cockroach; ants; bees and wasps; parasitic pests of man such as bedbugs, fleas, and ticks; occasional invaders such as flies and millipedes; silverfish and firebrats; beetles; termites; moths; fungi; and vertebrates including rodents,…

Evaluation of cimi-shield knock-out bed bug eliminator against house fly (Musca domestica) adults

USDA-ARS?s Scientific Manuscript database

Cimi-Shield Knock-Out (CSKO) Bed Bug Eliminator is a green treatment labeled for use against bed bugs, carpet beetles, ants, roaches, fleas, ticks, silverfish, millipedes and centipedes. The active ingredient is soybean oil. If CSKO is formulated according to label instructions and sprayed directly ...

Evaluation of cimi-shield knock-out bed bug eliminator against house fly (Musca domestica) adults.

USDA-ARS?s Scientific Manuscript database

Cimi-Shield Knock-Out (CSKO) Bed Bug Eliminator is a green treatment labeled for use against bed bugs, carpet beetles, ants, roaches, fleas, ticks, silverfish, millipedes and centipedes. The active ingredient is soybean oil. If CSKO is formulated according to label instructions and sprayed directly ...

Strong Phylogeographic Structure in a Millipede Indicates Pleistocene Vicariance between Populations on Banded Iron Formations in Semi-Arid Australia

PubMed Central

Nistelberger, Heidi; Byrne, Margaret; Coates, David; Roberts, J. Dale

2014-01-01

The Yilgarn Banded Iron Formations of Western Australia are topographical features that behave as terrestrial islands within the otherwise flat, semi-arid landscape. The formations are characterised by a high number of endemic species, some of which are distributed across multiple formations without inhabiting the intervening landscape. These species provide an ideal context for phylogeographic analysis, to investigate patterns of genetic variation at both spatial and temporal scales. We examined genetic variation in the spirostreptid millipede, Atelomastix bamfordi, found on five of these Banded Iron Formations at two mitochondrial loci and 11 microsatellite loci. Strong phylogeographic structuring indicated the five populations became isolated during the Pleistocene, a period of intensifying aridity in this landscape, when it appears populations have been restricted to pockets of moist habitat provided by the formations. The pattern of reciprocal monophyly identified within the mtDNA and strong differentiation within the nuclear microsatellite data highlight the evolutionary significance of these divergent populations and we suggest the degree of differentiation warrants designation of each as a conservation unit. PMID:24663390

Divergence in genital morphology may contribute to mechanical reproductive isolation in a millipede

PubMed Central

Wojcieszek, Janine M; Simmons, Leigh W

2013-01-01

Genitalia appear to evolve rapidly and divergently in taxa with internal fertilization. The current consensus is that intense directional sexual selection drives the rapid evolution of genitalia. Recent research on the millipede Antichiropus variabilis suggests that the male genitalia are currently experiencing stabilizing selection – a pattern of selection expected for lock-and-key structures that enforce mate recognition and reproductive isolation. Here, we investigate how divergence in genital morphology affects reproductive compatibility among isolated populations of A. variabilis. Females from a focal population were mated first to a male from their own population and, second, to a male from one of two populations with divergent genital morphology. We observed variation in mating behavior that might indicate the emergence of precopulatory reproductive barriers: males from one divergent population took significantly longer to recognize females and exhibited mechanical difficulty in genital insertion. Moreover, we observed very low paternity success for extra-population males who were successful in copulating. Our data suggest that divergence in genital shape may be contributing to reproductive isolation, and incipient speciation among isolated populations of A. variabilis. PMID:23467632

Mountain Refugia Play a Role in Soil Arthropod Speciation on Madagascar: A Case Study of the Endemic Giant Fire-Millipede Genus Aphistogoniulus

PubMed Central

Wesener, Thomas; Raupach, Michael J.; Decker, Peter

2011-01-01

To elucidate the speciation mechanisms prevalent within hotspots of biodiversity, and the evolutionary processes behind the rise of their species-rich and endemic biota, we investigated the phylogeny of the giant fire-millipede genus Aphistogoniulus Silvestri, 1897, a Malagasy endemic. This study is the first comprehensive (molecular and morphological) phylogenetic study focusing on millipede (class Diplopoda) speciation on Madagascar. The morphological analysis is based on 35 morphological characters and incorporates ten described as well as two newly described species (A. rubrodorsalis n. sp. and A. jeekeli n. sp.) of Aphistogoniulus. The molecular analysis is based on both mitochondrial (COI and 16S), and nuclear genes (complete 18S rDNA), together comprised of 3031 base pairs, which were successfully sequenced for 31 individual specimens and eight species of Aphistogoniulus. In addition to the null-model (speciation by distance), two diversification models, mountain refugia and ecotone shift, were discovered to play a role in the speciation of soil arthropods on Madagascar. Mountain refugia were important in the speciation of the A. cowani clade, with three species occurring in the Andringitra and Ranomafana Mountains in the southeast (A. cowani), the Ambohijanahary and Ambohitantely Mountains in the mid-west (A. sanguineus), and the Marojejy Mountain in the northeast (A. rubrodorsalis n. sp.). An ecotone shift from the eastern rainforest to the unique subarid spiny forest of Mahavelo was discovered in the A. vampyrus - A. aridus species-pair. In the monophyletic A. diabolicus clade, evidence for divergent evolution of sexual morphology was detected: species with greatly enlarged gonopods are sister-taxa to species with normal sized gonopods. Among the large-bodied Spirobolida genera of Madagascar, Colossobolus and Sanguinobolus were found to be close sister-genera to Aphistogoniulus. Forest destruction has caused forest corridors between populations to disappear, which might limit the possible resolution of biogeographic analyses on Madagascar. PMID:22162998

Pleistocene glacial refugia across the Appalachian Mountains and coastal plain in the millipede genus Narceus: Evidence from population genetic, phylogeographic, and paleoclimatic data

PubMed Central

Walker, Matt J; Stockman, Amy K; Marek, Paul E; Bond, Jason E

2009-01-01

Background Species that are widespread throughout historically glaciated and currently non-glaciated areas provide excellent opportunities to investigate the role of Pleistocene climatic change on the distribution of North American biodiversity. Many studies indicate that northern animal populations exhibit low levels of genetic diversity over geographically widespread areas whereas southern populations exhibit relatively high levels. Recently, paleoclimatic data have been combined with niche-based distribution modeling to locate possible refugia during the Last Glacial Maximum. Using phylogeographic, population, and paleoclimatic data, we show that the distribution and mitochondrial data for the millipede genus Narceus are consistent with classical examples of Pleistocene refugia and subsequent post-glacial population expansion seen in other organismal groups. Results The phylogeographic structure of Narceus reveals a complex evolutionary history with signatures of multiple refugia in southeastern North America followed by two major northern expansions. Evidence for refugial populations were found in the southern Appalachian Mountains and in the coastal plain. The northern expansions appear to have radiated from two separate refugia, one from the Gulf Coastal Plain area and the other from the mid-Atlantic coastal region. Distributional models of Narceus during the Last Glacial Maximum show a dramatic reduction from the current distribution, with suitable ecological zones concentrated along the Gulf and Atlantic coastal plain. We found a strong correlation between these zones of ecological suitability inferred from our paleo-model with levels of genetic diversity derived from phylogenetic and population estimates of genetic structuring. Conclusion The signature of climatic change, during and after the Pleistocene, on the distribution of the millipede genus Narceus is evident in the genetic data presented. Niche-based historical distribution modeling strengthens the conclusions drawn from the genetic data and proves useful in identifying probable refugia. Such interdisciplinary biogeographic studies provide a comprehensive approach to understanding these processes that generate and maintain biodiversity as well as the framework necessary to explore questions regarding evolutionary diversification of taxa. PMID:19183468

Heth impalutiensis n. sp. (Nematoda: Ransomnematoidea: Hethidae) a millipede parasite from Central Mindanao, Philippines.

PubMed

Malysheva, Svetlana V; Mohagan, Alma B; Spiridonov, Sergei E

2015-03-04

The nematode Heth impalutiensis n. sp. is described from an unidentified spirostreptid millipede (Harpagophoridae) from the Bukidnon Province of Mindanao, the Philippines. Based on morphological characters, H. impalutiensis n. sp. is closest to Asian-Pacific representatives of the genus. Females of H. impalutiensis n. sp. are close to H. dimorphum and H. vietnamensis in body size and form of the lateral lappets, but can be distinguished by the significantly longer tail. Males of H. impalutiensis n. sp. strongly resemble that of H. xaniophora by the presence of such a rare character combinations as mammiform papillae and a bursa-like cuticular fold, but can be easily differentiated by the numbers of genital papillae (7 vs 6 pairs, respectively). Heth impalutiensis n. sp. can be distinguished from all nominal species by hypertrophy of the anterior anal lip in females which overlaps the anal aperture. Phylogenetic analysis based on the newly obtained set of sequences did not provide an evidence of infraorder Rhigonematomorpha monophyly as two superfamilies Ransomnematoidea and Rhigonematoidea formed independent clades in the frames of ascaridid-spirurid-oxyurid super clade (Clade III of Nadler et al., 2007).

The ecology of saprophagous macroarthropods (millipedes, woodlice) in the context of global change.

PubMed

David, Jean-François; Handa, Ira Tanya

2010-11-01

Millipedes (Diplopoda) and woodlice (Crustacea, Isopoda), with a total of about 15000 described species worldwide, contribute substantially to invertebrate biodiversity. These saprophagous macroarthropods, which are key regulators of plant litter decomposition, play an important role in the functioning of terrestrial ecosystems in tropical and temperate areas. Herein we review current knowledge on the effects of climate, food quality and land cover on millipede and woodlouse species to explore their potential responses to global change. Essentially similar trends are observed in the two taxa. Experiments have shown that climate warming could result in higher rates of population growth and have positive effects on the abundance of some temperate species. This is consistent with signs of northward expansion in Europe, although the mechanisms of dispersal remain unclear. The generality of this finding is evaluated in relation to the life histories and geographical distributions of species. At low latitudes, interactions with more severe droughts are likely and could affect community composition. Elevated atmospheric CO₂ levels and changes in plant community composition are expected to alter leaf litter quality, a major determinant of macroarthropod fertility via the link with female adult body size. Although food quality changes have been shown to influence population growth rates significantly, it is proposed that the effects of warming will be probably more important during the coming decades. Land cover changes, mainly due to deforestation in the tropics and land abandonment in Europe, are critical to habitat specialists and could override any other effect of global change. Habitat destruction by man may be the main threat to macroarthropod species, many of which are narrow endemics. At the landscape scale, habitat heterogeneity could be a good option for conservation, even at the cost of some fragmentation. Two principal areas are identified which require further work: (i) the effects of climate change across broader geographic ranges, and on species with different ecologies and life histories; (ii) the effects of global change on both macroarthropods and their natural enemies (predators, parasites and pathogens), to improve predictions in field situations. © 2010 The Authors. Biological Reviews © 2010 Cambridge Philosophical Society.

Dracaena marginata biofilter: design of growth substrate and treatment of stormwater runoff.

PubMed

Vijayaraghavan, K; Praveen, R S

2016-01-01

The purpose of this research was to investigate the efficiency of Dracaena marginata planted biofilters to decontaminate urban runoff. A new biofilter growth substrate was prepared using low-cost and locally available materials such as red soil, fine sand, perlite, vermiculite, coco-peat and Sargassum biomass. The performance of biofilter substrate was compared with local garden soil based on physical and water quality parameters. Preliminary analyses indicated that biofilter substrate exhibited desirable characteristics such as low bulk density (1140 kg/m(3)), high water holding capacity (59.6%), air-filled porosity (7.82%) and hydraulic conductivity (965 mm/h). Four different biofilter assemblies, with vegetated and non-vegetated systems, were examined for several artificial rain events (un-spiked and metal-spiked). Results from un-spiked artificial rain events suggested that concentrations of most of the chemical components in effluent were highest at the beginning of rain events and thereafter subsided during the subsequent rain events. Biofilter growth substrate showed superior potential over garden soil to retain metal ions such as Al, Fe, Cu, Cr, Ni, Zn, Cd and Pb during metal-spiked rain events. Significant differences were also observed between non-vegetated and vegetated biofilter assemblies in runoff quality, with the latter producing better results.

Ovarian developmental variation in the primitively eusocial wasp Ropalidia marginata suggests a gateway to worker ontogeny and the evolution of sociality.

PubMed

Shukla, Shantanu; Chandran, Swarnalatha; Gadagkar, Raghavendra

2013-01-15

Social insects are characterized by reproductive caste differentiation of colony members into one or a small number of fertile queens and a large number of sterile workers. The evolutionary origin and maintenance of such sterile workers remains an enduring puzzle in insect sociobiology. Here, we studied ovarian development in over 600 freshly eclosed, isolated, virgin female Ropalidia marginata wasps, maintained in the laboratory. The wasps differed greatly both in the time taken to develop their ovaries and in the magnitude of ovarian development despite having similar access to resources. All females started with no ovarian development at day zero, and the percentage of individuals with at least one oocyte at any stage of development increased gradually across age, reached 100% at 100 days and decreased slightly thereafter. Approximately 40% of the females failed to develop ovaries within the average ecological lifespan of the species. Age, body size and adult feeding rate, when considered together, were the most important factors governing ovarian development. We suggest that such flexibility and variation in the potential and timing of reproductive development may physiologically predispose females to accept worker roles and thus provide a gateway to worker ontogeny and the evolution of sociality.

The Australian millipede Dicranogonus pix Jeekel, 1982 (Diplopoda, Polydesmida, Paradoxosomatidae): a species with and without paranota

PubMed Central

Mesibov, Robert

2014-01-01

Abstract Dicranogonus pix Jeekel, 1982 occurs in Victoria and Tasmania, Australia, including the islands in eastern Bass Strait between the two States. There is only slight gonopod variation across this range, but Dicranogonus pix populations with and without paranota are separated in Bass Strait by the ca 50 km-wide gap between the Kent and Furneaux Groups of islands. PMID:25493065

Spatial variability of an invasive earthworm (Amynthas agrestis) population and potential impacts on soil characteristics and millipedes in the Great Smoky Mountains National Park, USA

Treesearch

B.A. Snyder; M.A. Jr. Callaham; P.F. Hendrix

2010-01-01

European and Asian earthworm invasions are widespread in North America. European earthworms especially are well-known to cause dramatic changes in ecosystems in northern, formerly glaciated portions of the continent, but less is known about the impacts of earthworm invasions in unglaciated areas inhabited by indigenous earthworms. We monitored fluctuations in the...

Integrative revision of the giant pill-millipede genus Sphaeromimus from Madagascar, with the description of seven new species (Diplopoda, Sphaerotheriida, Arthrosphaeridae)

PubMed Central

Wesener, Thomas; Le, Daniel Minh-Tu; Loria, Stephanie F.

2014-01-01

Abstract The Malagasy giant pill-millipede genus Sphaeromimus de Saussure & Zehntner, 1902 is revised. Seven new species, S. titanus sp. n., S. vatovavy sp. n., S. lavasoa sp. n., S. andohahela sp. n., S. ivohibe sp. n., S. saintelucei sp. n., and S. andrahomana sp. n. were discovered, in one case with the help of sequence data, in the rainforests of southeastern Madagascar. The species are described using light- and scanning electron microscopy. A key to all 10 species of the genus is presented. All but one (S. andohahela) of the newly discovered species are microendemics each occurring in isolated forest fragments. The mitochondrial COI barcoding gene was amplified and sequenced for 18 Sphaeromimus specimens, and a dataset containing COI sequences of 28 specimens representing all Sphaeromimus species (except S. vatovavy) was analyzed. All species are genetically monophyletic. Interspecific uncorrected genetic distances were moderate (4–10%) to high (18–25%), whereas intraspecific variation is low (0–3.5%). Sequence data allowed the correct identification of three colour morphs of S. musicus, as well as the identity of a cave specimen, which although aberrant in its morphology and colouration, was genetically identical to the holotype of S. andrahoma. PMID:25009417

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wenk, Evelyn S.; Callaham, Mac A.; O'Brien, Joseph J.

We describe how, within the temperate, deciduous forests of the eastern US, diverse soil-fauna communities are structured by a combination of environmental gradients and interactions with other biota. The introduction of non-native soil taxa has altered communities and soil processes, and adds another degree of variability to these systems. We sampled soil macroinvertebrate abundance from forested sites in Missouri (MO), Michigan (MI), Massachusetts (MA), and New Hampshire (NH), with the objective of comparing community assemblages and evaluating the role of invasive earthworms along the temperature—productivity gradient represented by the sites. The primary detritivores encountered were earthworms and millipedes. Earthworms weremore » collected only in MO and MI, and at much greater density in MO. Millipedes were found at every site except in MO, and at their highest mean density in NH. Warmer temperatures, higher litter productivity, and low Oa horizon depth (as found in MO) were correlated with high earthworm activity. Oa horizon depth was the greatest in NH, where the macroinvertebrate community was dominated (in terms of abundance) by predators and herbivores, not detritivores. Our results are suggestive of, and congruent with, the concept of earthworms as ecosystem engineers, as we found that the presence of non-native earthworm species was associated with significant differences in soil characteristics such as apparent rapid decomposition rates and reduced carbon storage in the Oa horizon.« less

Streptomyces kronopolitis sp. nov., an actinomycete that produces phoslactomycins isolated from a millipede (Kronopolites svenhedind Verhoeff).

PubMed

Liu, Chongxi; Ye, Lan; Li, Yao; Jiang, Shanwen; Liu, Hui; Yan, Kai; Xiang, Wensheng; Wang, Xiangjing

2016-12-01

A phoslactomycin-producing actinomycete, designated strain NEAU-ML8T, was isolated from a millipede (Kronopolites svenhedind Verhoeff) and characterized using a polyphasic approach. 16S rRNA gene sequence analysis showed that strain NEAU-ML8T belongs to the genus Streptomyces with the highest sequence similarities to Streptomyces lydicus NBRC 13058T (99.39 %) and Streptomyces chattanoogensis DSM 40002T (99.25 %). The maximum-likelihood phylogenetic tree based on 16S rRNA gene sequences showed that the isolate formed a distinct phyletic line with NBRC 13058T and S. chattanoogensis DSM 40002T. This branching pattern was also supported by the tree rconstructed with the neighbour-joining method. A combination of DNA-DNA hybridization experiments and phenotypic tests were carried out between strain NEAU-ML8T and its phylogenetically closely related strains, which further clarified their relatedness and demonstrated that NEAU-ML8T could be distinguished from NBRC 13058T and S. chattanoogensis DSM 40002T. Therefore, it is concluded that strain NEAU-ML8T can be classified as representing a novel species of the genus Streptomyces, for which the name Streptomyces kronopolitis sp. nov. is proposed. The type strain is NEAU-ML8T (=DSM 101986T=CGMCC 4.7323T).

Reviewing the relevance of fluorescence in biological systems.

PubMed

Lagorio, M Gabriela; Cordon, Gabriela B; Iriel, Analia

2015-09-26

Fluorescence is emitted by diverse living organisms. The analysis and interpretation of these signals may give information about their physiological state, ways of communication among species and the presence of specific chemicals. In this manuscript we review the state of the art in the research on the fluorescence emitted by plant leaves, fruits, flowers, avians, butterflies, beetles, dragonflies, millipedes, cockroaches, bees, spiders, scorpions and sea organisms and discuss its relevance in nature.

[Negative air ions generated by plants upon pulsed electric field stimulation applied to soil].

PubMed

Wu, Ren-ye; Deng, Chuan-yuan; Yang, Zhi-jian; Weng, Hai-yong; Zhu, Tie-jun-rong; Zheng, Jin-gui

2015-02-01

This paper investigated the capacity of plants (Schlumbergera truncata, Aloe vera var. chinensis, Chlorophytum comosum, Schlumbergera bridgesii, Gymnocalycium mihanovichii var. friedrichii, Aspidistra elatior, Cymbidium kanran, Echinocactus grusonii, Agave americana var. marginata, Asparagus setaceus) to generate negative air ions (NAI) under pulsed electric field stimulation. The results showed that single plant generated low amounts of NAI in natural condition. The capacity of C. comosum and G. mihanovichii var. friedrichii generated most NAI among the above ten species, with a daily average of 43 ion · cm(-3). The least one was A. americana var. marginata with the value of 19 ion · cm(-3). When proper pulsed electric field stimulation was applied to soil, the NAI of ten plant species were greatly improved. The effect of pulsed electric field u3 (average voltage over the pulse period was 2.0 x 10(4) V, pulse frequency was 1 Hz, and pulse duration was 50 ms) was the greatest. The mean NAI concentration of C. kanran was the highest 1454967 ion · cm(-3), which was 48498.9 times as much as that in natural condition. The lowest one was S. truncata with the value of 34567 ion · cm(-3), which was 843.1 times as much as that in natural condition. The capacity of the same plants to generate negative air ion varied extremely under different intensity pulsed electric fields.

Roughness-dependent friction force of the tarsal claw system in the beetle Pachnoda marginata (Coleoptera, Scarabaeidae).

PubMed

Dai, Zhendong; Gorb, Stanislav N; Schwarz, Uli

2002-08-01

This paper studies slide-resisting forces generated by claws in the free-walking beetle Pachnoda marginata (Coleoptera, Scarabaeoidea) with emphasis on the relationship between the dimension of the claw tip and the substrate texture. To evaluate the force range by which the claw can interact with a substrate, forces generated by the freely moving legs were measured using a load cell force transducer. To obtain information about material properties of the claw, its mechanical strength was tested in a fracture experiment, and the internal structure of the fractured claw material was studied by scanning electron microscopy. The bending stress of the claw was evaluated as 143.4-684.2 MPa, depending on the cross-section model selected. Data from these different approaches led us to propose a model explaining the saturation of friction force with increased texture roughness. The forces are determined by the relative size of the surface roughness R(a) (or an average particle diameter) and the diameter of the claw tip. When surface roughness is much bigger than the claw tip diameter, the beetle can grasp surface irregularities and generate a high degree of attachment due to mechanical interlocking with substrate texture. When R(a) is lower than or comparable to the claw tip diameter, the frictional properties of the contact between claw and substrate particles play a key role in the generation of the friction force.

Soil Macroinvertebrate Communities Across a Productivity Gradient in Deciduous Forests of Eastern North America

DOE PAGES

Wenk, Evelyn S.; Callaham, Mac A.; O'Brien, Joseph J.; ...

2016-03-01

We describe how, within the temperate, deciduous forests of the eastern US, diverse soil-fauna communities are structured by a combination of environmental gradients and interactions with other biota. The introduction of non-native soil taxa has altered communities and soil processes, and adds another degree of variability to these systems. We sampled soil macroinvertebrate abundance from forested sites in Missouri (MO), Michigan (MI), Massachusetts (MA), and New Hampshire (NH), with the objective of comparing community assemblages and evaluating the role of invasive earthworms along the temperature—productivity gradient represented by the sites. The primary detritivores encountered were earthworms and millipedes. Earthworms weremore » collected only in MO and MI, and at much greater density in MO. Millipedes were found at every site except in MO, and at their highest mean density in NH. Warmer temperatures, higher litter productivity, and low Oa horizon depth (as found in MO) were correlated with high earthworm activity. Oa horizon depth was the greatest in NH, where the macroinvertebrate community was dominated (in terms of abundance) by predators and herbivores, not detritivores. Our results are suggestive of, and congruent with, the concept of earthworms as ecosystem engineers, as we found that the presence of non-native earthworm species was associated with significant differences in soil characteristics such as apparent rapid decomposition rates and reduced carbon storage in the Oa horizon.« less

Mineral cycling in soil and litter arthropod food chains. Three-year progress report, February 1, 1984-January 31, 1987

DOE Office of Scientific and Technical Information (OSTI.GOV)

Crossley, D.A. Jr.

1986-08-29

This report summarizes progress in a three-year research project on the influence of soil arthropods (mites, collembolans, insects, millipedes and others) upon decomposition rates and nutrient dynamics in decaying vegetable matter. Research has concentrated on two aspects of elemental dynamics in decomposing organic matter: Effects of arthropods on rates of decomposition and nutrient loss (mineralization of carbon and other elements), and arthropod stimulation of microbial immobilization of nutrient elements during decomposition.

A new genus and species of native exotic millipede in Australia (Diplopoda, Polydesmida, Paradoxosomatidae)

PubMed Central

Mesibov, Robert; Car, Catherine A.

2015-01-01

Abstract Taxidiotisoma portabile gen. n., sp. n. is described from scattered populations in New South Wales, Victoria and Tasmania, Australia. Populations of Taxidiotisoma portabile in Victoria, Tasmania and parts of New South Wales occur in urban, suburban and agricultural areas, with no collections of the species in natural habitats in the same district. Taxidiotisoma portabile is likely to be a native exotic species whose home range is in eastern New South Wales. PMID:25931961

Adaptations and Predispositions of Different Middle European Arthropod Taxa (Collembola, Araneae, Chilopoda, Diplopoda) to Flooding and Drought Conditions

PubMed Central

Marx, Michael Thomas; Guhmann, Patrick; Decker, Peter

2012-01-01

Simple Summary This review summarizes adaptations and predispositions of different arthropod taxa (springtails, web spiders, millipedes and centipedes) to flood and drought conditions. The main focus sis directed to arthropod species, which are living in Middle European floodplain forests and wetlands, because of the fast change of flood and drought conditions in these habitats. Furthermore the effects of the predicted regional climate change like increasing aperiodic summer flooding and decreasing winter and spring floods are also discussed. Abstract Floodplain forests and wetlands are amongst the most diverse and species rich habitats on earth. Arthropods are a key group for the high diversity pattern of these landscapes, due to the fact that the change between flooding and drought causes in different life cycles and in a variety of adaptations in the different taxa. The floodplain forests and wetlands of Central Amazonia are well investigated and over the last 50 years many adaptations of several hexapod, myriapod and arachnid orders were described. In contrast to Amazonia the Middle European floodplains were less investigated concerning the adaptations of arthropods to flood and drought conditions. This review summarizes the adaptations and predispositions of springtails, web spiders, millipedes and centipedes to the changeable flood and drought conditions of Middle European floodplain forests and wetlands. Furthermore the impact of regional climate change predictions like increasing aperiodic summer floods and the decrease of typical winter and spring floods are discussed in this article. PMID:26487164

Use of galerina marginata genes and proteins for peptide production

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hallen-Adams, Heather E.; Scott-Craig, John S.; Walton, Jonathan D.

The present invention relates to compositions and methods comprising genes and peptides associated with cyclic peptides and cyclic peptide production in mushrooms. In particular, the present invention relates to using genes and proteins from Galerina species encoding peptides specifically relating to amatoxins in addition to proteins involved with processing cyclic peptide toxins. In a preferred embodiment, the present invention also relates to methods for making small peptides and small cyclic peptides including peptides similar to amanitin. Further, the present inventions relate to providing kits for making small peptides.

Use of Galerina marginata genes and proteins for peptide production

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hallen-Adams, Heather E.; Scott-Craig, John S.; Walton, Jonathan D.

The present invention relates to compositions and methods comprising genes and peptides associated with cyclic peptides and cyclic peptide production in mushrooms. In particular, the present invention relates to using genes and proteins from Galerina species encoding peptides specifically relating to amatoxins in addition to proteins involved with processing cyclic peptide toxins. In a preferred embodiment, the present invention also relates to methods for making small peptides and small cyclic peptides including peptides similar to amanitin. Further, the present inventions relate to providing kits for making small peptides.

Use of Galerina marginata genes and proteins for peptide production

DOEpatents

Hallen-Adams, Heather E.; Scott-Craig, John S.; Walton, Jonathan D.; Luo, Hong

2016-03-01

The present invention relates to compositions and methods comprising genes and peptides associated with cyclic peptides and cyclic peptide production in mushrooms. In particular, the present invention relates to using genes and proteins from Galerina species encoding peptides specifically relating to amatoxins in addition to proteins involved with processing cyclic peptide toxins. In a preferred embodiment, the present invention also relates to methods for making small peptides and small cyclic peptides including peptides similar to amanitin. Further, the present inventions relate to providing kits for making small peptides.

A multiproxy fjord sediment record of Holocene climate change from the subantarctic Auckland Islands

NASA Astrophysics Data System (ADS)

Browne, I. M.; Moy, C. M.; Wilson, G. S.; Neil, H.; Riesselman, C. R.

2014-12-01

The Southern Hemisphere Westerly Winds (SHWW) and the associated oceanic fronts have a major influence on atmospheric and oceanic circulation in the Southern Hemisphere. Sediment cores recovered from fjords along the eastern margin of the sub-Antarctic Auckland Islands (51°S, 166°E) are ideally located to sensitively record changes in the strength and position of the SHWW throughout the Holocene. A 5.75m core from Hanfield Inlet preserves both marine and terrestrial environmental components, which we use to develop a multiproxy record of past climatic conditions. This core, composed entirely of brown marine mud and silt, was recovered from a depth of 44m. Based on the entrance sill depth of the fjord (10mbsl) and our knowledge of regional sea level rise, we infer that the base of the core will be early Holocene in age, which will be confirmed using radiocarbon age dating. Benthic foraminiferal assemblages (125-500μm fraction) in surface and downcore samples are dominated by three taxa, Nonionellina flemingi, Cassidulina carinata and Quinqueloculina seminula. These species are either shallow infaunal or infaunal. We will use stable carbon (δ¹³C) and oxygen (δ¹⁸O) isotope geochemistry of the benthic foraminifera Nonionellina flemingi, Bolivina cf. earlandi, Trifarina angulosa, Bulimina marginata f. marginata and Cibicides species (all identified from Rose Bengal stained box-core samples) to reconstruct water column fluctuations associated with frontal migration. These results will compliment bulk sediment C and N concentration and isotope reconstructions of terrestrial organic matter delivery to fjord sub-basins over the past 12,000 years.

Does initial spacing influence crown and hydraulic architecture of Eucalyptus marginata?

PubMed

Grigg, A H; Macfarlane, C; Evangelista, C; Eamus, D; Adams, M A

2008-05-01

Long-term declines in rainfall in south-western Australia have resulted in increased interest in the hydraulic characteristics of jarrah (Eucalyptus marginata Donn ex Smith) forest established in the region's drinking water catchments on rehabilitated bauxite mining sites. We hypothesized that in jarrah forest established on rehabilitated mine sites: (1) leaf area index (L) is independent of initial tree spacing; and (2) more densely planted trees have less leaf area for the same leaf mass, or the same sapwood area, and have denser sapwood. Initial stand densities ranged from about 600 to 9000 stems ha(-1), and trees were 18 years old at the time of sampling. Leaf area index was unaffected by initial stand density, except in the most sparsely stocked stands where L was 1.2 compared with 2.0-2.5 in stands at other spacings. The ratio of leaf area to sapwood area (A(l):A(s)) was unaffected by tree spacing or tree size and was 0.2 at 1.3 m height and 0.25 at the crown base. There were small increases in sapwood density and decreases in leaf specific area with increased spacing. Tree diameter or basal area was a better predictor of leaf area than sapwood area. At the stand scale, basal area was a good predictor of L (r(2) = 0.98, n = 15) except in the densest stands. We conclude that the hydraulic attributes of this forest type are largely independent of initial tree spacing, thus simplifying parameterization of stand and catchment water balance models.

Reproductive queue without overt conflict in the primitively eusocial wasp Ropalidia marginata

PubMed Central

Bang, Alok; Gadagkar, Raghavendra

2012-01-01

Colonies of the primitively eusocial wasp Ropalidia marginata consist of a single egg layer (queen) and a number of non–egg-laying workers. Although the queen is a docile individual, not at the top of the behavioral dominance hierarchy of the colony, she maintains complete reproductive monopoly. If the queen is lost or removed, one and only one of the workers [potential queen (PQ)] becomes hyperaggressive and will become the next queen of the colony. The PQ is almost never challenged because she first becomes hyperaggressive and then gradually loses her aggression, develops her ovaries, and starts laying eggs. Although we are unable to identify the PQ when the queen is present, she appears to be a “cryptic heir designate.” Here, we show that there is not just one heir designate but a long reproductive queue and that PQs take over the role of egg-laying, successively, without overt conflict, as the queen or previous PQs are removed. The dominance rank of an individual is not a significant predictor of its position in the succession hierarchy. The age of an individual is a significant predictor, but it is not a perfect predictor because PQs often bypass older individuals to become successors. We suggest that such a predesignated reproductive queue that is implemented without overt conflict is adaptive in the tropics, where conspecific usurpers from outside the colony, which can take advantage of the anarchy prevailing in a queenless colony and invade it, are likely to be present throughout the year. PMID:22908278

Social insect colony as a biological regulatory system: modelling information flow in dominance networks.

PubMed

Nandi, Anjan K; Sumana, Annagiri; Bhattacharya, Kunal

2014-12-06

Social insects provide an excellent platform to investigate flow of information in regulatory systems since their successful social organization is essentially achieved by effective information transfer through complex connectivity patterns among the colony members. Network representation of such behavioural interactions offers a powerful tool for structural as well as dynamical analysis of the underlying regulatory systems. In this paper, we focus on the dominance interaction networks in the tropical social wasp Ropalidia marginata-a species where behavioural observations indicate that such interactions are principally responsible for the transfer of information between individuals about their colony needs, resulting in a regulation of their own activities. Our research reveals that the dominance networks of R. marginata are structurally similar to a class of naturally evolved information processing networks, a fact confirmed also by the predominance of a specific substructure-the 'feed-forward loop'-a key functional component in many other information transfer networks. The dynamical analysis through Boolean modelling confirms that the networks are sufficiently stable under small fluctuations and yet capable of more efficient information transfer compared to their randomized counterparts. Our results suggest the involvement of a common structural design principle in different biological regulatory systems and a possible similarity with respect to the effect of selection on the organization levels of such systems. The findings are also consistent with the hypothesis that dominance behaviour has been shaped by natural selection to co-opt the information transfer process in such social insect species, in addition to its primal function of mediation of reproductive competition in the colony. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

Flower development of Goniorrhachis marginata reveals new insights into the evolution of the florally diverse detarioid legumes.

PubMed

Prenner, Gerhard; Cardoso, Domingos

2017-02-01

The study of floral morphology and ontogeny and the re-investigation of existing data help to uncover potential synapomorphic characters and foster our understanding of phylogenetic relationships that rely primarily on molecular analyses. Goniorrhachis marginata is a monotypic caesalpinioid legume (Leguminosae) that shows some interesting floral features, such as a long hypanthium and regular Rosaceae-like flowers. We studied the ontogeny and morphology of the flowers in detail and present our results in a broad phylogenetic context. Flower buds were collected in the field, fixed in 70 % ethanol and investigated using scanning electron microscopy. Older buds in spirit were carefully opened to investigate the direction of style bending. Characters of the style from 131 taxa from the main legume lineages were analysed and mapped on a Bayesian molecular phylogeny. The tetramerous calyx is the result of complete loss of one sepal. The formation of the radially symmetrical corolla starts in a typical caesalpinioid pattern with the adaxial petal innermost (ascending aestivation). The young style bends in the abaxial direction, which is a character found exclusively in all studied detarioid legumes and therefore a newly described synapomorphy for the clade. We show that investigation of unstudied taxa and reinvestigation of published data can uncover new, previously overlooked and important characters. Curvature of the style can be detected in young buds with a hand lens and therefore is an important character for field botanists. Our study reveals the importance of including poorly studied and/or phylogenetically enigmatic taxa in molecular phylogenies and in detailed morphological and ontogenetic analyses. © The Author 2016. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Flower development of Goniorrhachis marginata reveals new insights into the evolution of the florally diverse detarioid legumes

PubMed Central

Prenner, Gerhard; Cardoso, Domingos

2017-01-01

Background and Aims The study of floral morphology and ontogeny and the re-investigation of existing data help to uncover potential synapomorphic characters and foster our understanding of phylogenetic relationships that rely primarily on molecular analyses. Goniorrhachis marginata is a monotypic caesalpinioid legume (Leguminosae) that shows some interesting floral features, such as a long hypanthium and regular Rosaceae-like flowers. We studied the ontogeny and morphology of the flowers in detail and present our results in a broad phylogenetic context. Methods Flower buds were collected in the field, fixed in 70 % ethanol and investigated using scanning electron microscopy. Older buds in spirit were carefully opened to investigate the direction of style bending. Characters of the style from 131 taxa from the main legume lineages were analysed and mapped on a Bayesian molecular phylogeny. Key Results The tetramerous calyx is the result of complete loss of one sepal. The formation of the radially symmetrical corolla starts in a typical caesalpinioid pattern with the adaxial petal innermost (ascending aestivation). The young style bends in the abaxial direction, which is a character found exclusively in all studied detarioid legumes and therefore a newly described synapomorphy for the clade. Conclusions We show that investigation of unstudied taxa and reinvestigation of published data can uncover new, previously overlooked and important characters. Curvature of the style can be detected in young buds with a hand lens and therefore is an important character for field botanists. Our study reveals the importance of including poorly studied and/or phylogenetically enigmatic taxa in molecular phylogenies and in detailed morphological and ontogenetic analyses. PMID:28025284

Influence of surface flattening on biodiversity of terrestrial arthropods during early stages of brown coal spoil heap restoration.

PubMed

Moradi, Jabbar; Potocký, Pavel; Kočárek, Petr; Bartuška, Martin; Tajovský, Karel; Tichánek, Filip; Frouz, Jan; Tropek, Robert

2018-08-15

Heterogeneity of environmental conditions is the crucial factor supporting biodiversity in various habitats, including post-mining sites. The effects of micro-topographic heterogeneity on biodiversity and conservation potential of arthropod communities in post-industrial habitats had not been studied before now. At one of the largest European brown coal spoil heaps, we sampled eight groups of terrestrial arthropods with different life strategies (moths, spiders, ground beetles, ants, orthopteroids, centipedes, millipedes, and woodlice), in successionally young plots (5-18 y), with a heterogeneous wavy surface after heaping, and compared the communities with plots flattened by dozing. A combination of the standardized quantitative sampling, using two different methods, and a paired design of the plot selection enabled a robust analysis. Altogether, we recorded 380 species of the focal arthropods, 15 of them nationally threatened. We revealed the importance of the micro-topographic heterogeneity for the formation of the biodiversity of arthropods in their secondary refuges. The communities with higher biodiversity and conservation value were detected in the plots with heterogeneous surfaces; exceptions were ground beetles and millipedes. The surface flattening, often the first step of technical reclamation projects, thus suppress biodiversity of most terrestrial arthropods during the restoration of post-mining sites. Since the communities of both surface types differed, the proportional presence on both surfaces could be more efficient in supporting the local biodiversity. We suggest reducing the surface dozing for the cases with other concerns only, to achieve a proportional representation of both surface types. Such a combination of different restoration approaches would, thus, efficiently support high biodiversity of groups with various needs. Copyright © 2018 Elsevier Ltd. All rights reserved.

Diversified forest ecosystems can grow on industrial waste residues: evidence from a multiproxy approach

NASA Astrophysics Data System (ADS)

Cortet, Jerome; Schwartz, Christophe; Echevarria, Guillaume; Nahmani, Johanne; Masfaraud, Jean-François; Ouvrard, Stéphanie; Sirguey, Catherine; Watteau, Francoise; Morel, Jean Louis

2010-05-01

Smelter activities in the Lorraine region (North-East France) have lead to the creation of flotation ponds that were used to eliminate wastes, mainly slag. After industrial decline, some of these flotation ponds were colonized by vegetation and evolved to forest ecosystems. One of these old flotation ponds, situated in Pompey, close to Nancy (North-East France), was studied by collecting information on several physico-chemical and biological indicators. The main objective was to understand the biological functioning of this system, whose soil can be classified as a pure Technosol, characterised by a very complex stratified profile created by successive slag deposits. Soil is characterized by its apparent heterogeneity, but also its high agronomic fertility and particularly high metal contents. Holorganic horizons can vary from one to several centimetres. Macrofauna is characterized by a very low abundance of earthworms and a dominance of millipedes. Furthermore, whereas earthworms do accumulate metals, this is not the case for millipedes. Mesofauna is typical of a temperate forest system, dominated by Collembola. Soil organo-mineral associations showed a high proportion of faecal pellets from Oribatid mites, Isopods and Diplopods. Furthermore, Mn, which is highly associated to metals (especially Zn and Pb) seems to play an important role in organo-mineral associations, including bacteria. An organic fraction is also directly associated to Calcium, Pb and Cu. Vegetation presents a high diversity, with more than 70 species, with very low metal transfer to plants. Results from soil respirometry are typical from temperate forest ecosystems. All this information has been combined to propose a model for the biochemical functioning of a such Technosol.

Identifying signature of chemical applications on indigenous and invasive nontarget arthropod communities in vineyards.

PubMed

Nash, Michael A; Hoffmann, Ary A; Thomson, Linda J

2010-09-01

Communities of arthropods providing ecosystem services (e.g., pest control, pollination, and soil nutrient cycling) to agricultural production systems are influenced by pesticide inputs, yet the impact of pesticide applications on nontarget organisms is normally evaluated through standardized sets of laboratory tests involving individual pesticides applied to a few representative species. By combining season-long pesticide applications of various insecticides and fungicides into a metric based on the International Organization for Biological and Integrated Control (IOBC) toxicity ratings, we evaluate season-long pesticide impacts on communities of indigenous and exotic arthropods across 61 vineyards assessed for an entire growing season. The composition of arthropod communities, identified mostly at the family level, but in some cases at the species level, was altered depending on season-long pesticide use. Numbers of mostly indigenous parasitoids, predatory mites, and coccinellids in the canopy, as well as carabid/tenebrionid beetles and some spider families on the ground, were decreased at higher cumulative pesticide metric scores. In contrast, numbers of one invasive millipede species (Ommatoiulus moreletti Lucas, Julida: Julidae) increased under higher cumulative pesticide metric scores. These changing community patterns were detected despite the absence of broad-spectrum insecticide applications in the vineyards. Pesticide effects were mostly due to indoxacarb and sulphur, applied as a fungicide. The reduction of beneficial arthropods and increase in an invasive herbivorous millipede under high cumulative pesticide metric scores highlights the need to manage nontarget season-long pesticide impacts in vineyards. A cumulative pesticide metric, based on IOBC toxicity ratings, provides a way of assessing overall toxicity effects, giving managers a means to estimate and consider potential negative season-long pesticide impacts on ecosystem services provided through arthropod communities.

The water-repellent cerotegument of whip-spiders (Arachnida: Amblypygi).

PubMed

Wolff, Jonas O; Seiter, Michael; Gorb, Stanislav N

2017-01-01

The cuticle of arthropods is usually composed of layers of a chitin-protein-microcomposite, a proteinaceous epicuticle and a thin lipid coating. However, in some instances a thick cement layer (cerotegument) covers the cuticle and may produce elaborate microstructures. This has previously been described for millipedes and mites. Here we report the previously unknown presence of a superhydrophobic cerotegument in whip-spiders (Ambypygi) and reveal its variation in ultrastructure and water-repellence between species. We discuss the relevance of found micro-morphological and physical characters for taxonomy and phylogenetics of this group, and the potential biological functions. Copyright © 2016 Elsevier Ltd. All rights reserved.

Review of the millipede genus Eutrichodesmus Silvestri, 1910, in China, with descriptions of new cavernicolous species (Diplopoda, Polydesmida, Haplodesmidae)

PubMed Central

Golovatch, Sergei I.; Geoffroy, Jean-Jacques; Mauriès, Jean-Paul; VandenSpiegel, Didier

2015-01-01

Abstract The Eutrichodesmus fauna of mainland China, by far the largest genus in the Indo-Australian family Haplodesmidae, is reviewed and shown to encompass 23 species (of a total of 45), all keyed. The following nine new species, all presumed troglobites, are described: Eutrichodesmus triangularis sp. n., from Sichuan, Eutrichodesmus lipsae sp. n., from Guangxi, Eutrichodesmus tenuis sp. n., Eutrichodesmus trontelji sp. n., Eutrichodesmus latellai sp. n., Eutrichodesmus obliteratus sp. n. and Eutrichodesmus troglobius sp. n., all from Guizhou, Eutrichodesmus sketi sp. n., from Hunan, and Eutrichodesmus apicalis sp. n., from Hubei. PMID:26052236

HPLC analysis and cytotoxic activity of Vernonia cinerea.

PubMed

Khay, Mom; Toeng, Phirom; Mahiou-Leddet, Valérie; Mabrouki, Fathi; Sothea, Kim; Ollivier, Evelyne; Elias, Riad; Bun, Sok-Siya

2012-10-01

The extracts of five Cambodian medicinal plants (Aganosma marginata, Dracaena cambodiana, Harrisonia perforata, Hymenodictyon excelsum and Vernonia cinerea) were evaluated in vitro for their cytotoxic activity against HT29 colon adenocarcinoma cells and HepG2 hepatoma cells, using the MTT assay. Among these five plants, Vernonia cinerea displayed potent cytotoxicity. One main sesquiterpene lactone, 8alpha-tigloyloxy-hirsutinolide-13-O-acetate was isolated from the whole plant of V. cinerea. This compound was active against both cancer cell lines (IC50 = 3.50 microM for HT29 and IC50 = 4.27 microM for HepG2). To quantify this compound in the plant, an analytical high-performance liquid chromatography (HPLC) method was developed and validated.

Owl monkeys (Aotus spp.) perform self- and social anointing in captivity.

PubMed

Jefferson, Jay P; Tapanes, Elizabeth; Evans, Sian

2014-01-01

Several species of primates, including owl monkeys (Aotus spp.), anoint by rubbing their fur with odiferous substances. Previous research has shown that capuchin monkeys (Cebus and Sapajus) anoint socially by rubbing their bodies together in groups of two or more while anointing. Owl monkeys housed at the DuMond Conservancy have been observed to anoint over the last 10 years, and we report detailed new information on the anointing behavior of this population, including descriptions of social anointing which occurs frequently. We first investigated the occurrence of self-anointing in 35 Aotus spp. presented with millipedes. Detailed descriptions regarding body regions anointed were obtained for all anointers (n = 28). The median duration for a self-anointing bout was 3.6 min (range from approx. 2 s to 14.15 min). While the latency and length of anointing bouts showed considerable interindividual differences, no statistically significant differences were found between sexes, wild- or captive-born owl monkeys or across age groups. However, we found the lower back and tail were anointed at a rate significantly greater than other body parts, but there were no differences in these patterns across sex or wild- or captive-born owl monkeys. More recently, social anointing was investigated in 26 Aotus spp. presented with millipedes, of which half were observed to anoint socially. The average duration for all social anointing bouts was 72.88 s, with a median duration of 30 s (range 5-322 s). A detailed ethogram was also generated that included behaviors that were performed while anointing, including facial expressions and vocalizations. The intraindividual variability for 8 monkeys used in both investigations is discussed. These findings extend our knowledge of anointing and confirm the existence of social anointing in another genus with a unique biology (nocturnal and socially monogamous) distinct from capuchins. © 2014 S. Karger AG, Basel

β-D-(1→4), β-D-(1→3) 'mixed linkage' xylans from red seaweeds of the order Nemaliales and Palmariales.

PubMed

Viana, Adriano G; Noseda, Miguel D; Gonçalves, Alan G; Duarte, Maria Eugênia R; Yokoya, Nair; Matulewicz, Maria C; Cerezo, Alberto S

2011-06-01

Xylans from five seaweeds belonging to the order Nemaliales (Galaxaura marginata, Galaxaura obtusata, Tricleocarpacylindrica, Tricleocarpa fragilis, and Scinaia halliae) and one of the order Palmariales (Palmaria palmata) collected on the Brazilian coasts were extracted with hot water and purified from acid xylomannans and/or xylogalactans through Cetavlon precipitation of the acid polysaccharides. The β-D-(1→4), β-D-(1→3) 'mixed linkage' structures were determined using methylation analysis and 1D and 2D NMR spectroscopy. The presence of large sequences of β-(1→4)-linked units suggests transient aggregates of ribbon- or helical-ordered structures that would explain the low optical rotations. Copyright © 2011 Elsevier Ltd. All rights reserved.

Seven New Recorded Species in Five Genera of the Strophariaceae in Korea.

PubMed

Cho, Hae Jin; Lee, Hyun; Park, Jae Young; Park, Myung Soo; Kim, Nam Kyu; Eimes, John A; Kim, Changmu; Han, Sang-Kuk; Lim, Young Woon

2016-09-01

Most known species in the Strophariaceae are decomposers and grow on various kind of organic matter. Approximately 18 genera and 1,316 species in the Strophariaceae have been reported worldwide. Through an ongoing survey of indigenous fungi in Korea, 29 specimens belonging to the Strophariaceae were collected from 2012 to 2016. These specimens were identified based on morphological characteristics and molecular analysis of internal transcribed spacer sequences. Fifteen taxa were confirmed, with eight species matching those previously recorded. Seven species in five genera were shown to be new records in Korea: Galerina marginata , Gymnopilus crociphyllus , Gymnopilus picreus , Hebeloma birrus , Hebeloma cavipes , Pholiota multicingulata , and Psilocybe thaizapoteca . In this study, we provide detailed morphological descriptions of these species and investigate their evolutionary relationships by constructing phylogenetic trees.

Seven New Recorded Species in Five Genera of the Strophariaceae in Korea

PubMed Central

Cho, Hae Jin; Lee, Hyun; Park, Jae Young; Park, Myung Soo; Kim, Nam Kyu; Eimes, John A.; Kim, Changmu; Han, Sang-Kuk

2016-01-01

Most known species in the Strophariaceae are decomposers and grow on various kind of organic matter. Approximately 18 genera and 1,316 species in the Strophariaceae have been reported worldwide. Through an ongoing survey of indigenous fungi in Korea, 29 specimens belonging to the Strophariaceae were collected from 2012 to 2016. These specimens were identified based on morphological characteristics and molecular analysis of internal transcribed spacer sequences. Fifteen taxa were confirmed, with eight species matching those previously recorded. Seven species in five genera were shown to be new records in Korea: Galerina marginata, Gymnopilus crociphyllus, Gymnopilus picreus, Hebeloma birrus, Hebeloma cavipes, Pholiota multicingulata, and Psilocybe thaizapoteca. In this study, we provide detailed morphological descriptions of these species and investigate their evolutionary relationships by constructing phylogenetic trees. PMID:27790064

Sensitivity of jarrah (Eucalyptus marginata) to phosphate, phosphite, and arsenate pulses as influenced by fungal symbiotic associations.

PubMed

Kariman, Khalil; Barker, Susan J; Jost, Ricarda; Finnegan, Patrick M; Tibbett, Mark

2016-07-01

Many plant species adapted to P-impoverished soils, including jarrah (Eucalyptus marginata), develop toxicity symptoms when exposed to high doses of phosphate (Pi) and its analogs such as phosphite (Phi) and arsenate (AsV). The present study was undertaken to investigate the effects of fungal symbionts Scutellospora calospora, Scleroderma sp., and Austroboletus occidentalis on the response of jarrah to highly toxic pulses (1.5 mmol kg(-1) soil) of Pi, Phi, and AsV. S. calospora formed an arbuscular mycorrhizal (AM) symbiosis while both Scleroderma sp. and A. occidentalis established a non-colonizing symbiosis with jarrah plants. All these interactions significantly improved jarrah growth and Pi uptake under P-limiting conditions. The AM fungal colonization naturally declines in AM-eucalypt symbioses after 2-3 months; however, in the present study, the high Pi pulse inhibited the decline of AM fungal colonization in jarrah. Four weeks after exposure to the Pi pulse, plants inoculated with S. calospora had significantly lower toxicity symptoms compared to non-mycorrhizal (NM) plants, and all fungal treatments induced tolerance against Phi toxicity in jarrah. However, no tolerance was observed for AsV-treated plants even though all inoculated plants had significantly lower shoot As concentrations than the NM plants. The transcript profile of five jarrah high-affinity phosphate transporter (PHT1 family) genes in roots was not altered in response to any of the fungal species tested. Interestingly, plants exposed to high Pi supplies for 1 day did not have reduced transcript levels for any of the five PHT1 genes in roots, and transcript abundance of four PHT1 genes actually increased. It is therefore suggested that jarrah, and perhaps other P-sensitive perennial species, respond positively to Pi available in the soil solution through increasing rather than decreasing the expression of selected PHT1 genes. Furthermore, Scleroderma sp. can be considered as a fungus with dual functional capacity capable of forming both ectomycorrhizal and non-colonizing associations, where both pathways are always accompanied by evident growth and nutritional benefits.

Microsatellite primers in Oenothera harringtonii (Onagraceae), an annual endemic to the shortgrass prairie of Colorado.

PubMed

Skogen, Krissa A; Hilpman, Evan T; Todd, Sadie L; Fant, Jeremie B

2012-08-01

Microsatellite markers were developed in the annual herb, Oenothera harringtonii, to investigate patterns of genetic diversity, gene flow, and parentage within and among populations of this Colorado endemic. Ten polymorphic loci were identified in O. harringtonii and tested in four populations sampled across the range of the species. These loci contained trinucleotide repeats with 7-29 alleles per locus. Nine of the 10 loci also amplified in O. caespitosa subsp. macroglottis, O. caespitosa subsp. marginata, and O. caespitosa subsp. navajoensis. In addition, we optimized three markers developed for O. biennis and provide reports of their effectiveness in all four taxa. These results indicate the utility of these markers in O. harringtonii for future studies of genetic structure, gene flow, and parentage as well as their applicability in other members of the O. caespitosa species complex.

Generic redescription, two new species, and a key to the species of the cicada genus Ariasa Distant, 1905 with the description of a new genus (Hemiptera: Cicadidae: Cicadinae: Fidicinini).

PubMed

Sanborn, Allen F

2016-07-13

The cicada genus Ariasa Distant, 1905 is redescribed.  Ariasa albimaculosa n. sp. is described from Colombia and A. bartletti n. sp. is described from Peru.  The current 14 species of Ariasa are listed along with their synonymies, known distribution of each species, and a key to the species is provided.  The first records of Ariasa bilaqueata (Uhler, 1903) for Peru and French Guiana are provided. Cracenpsaltria brasiliorum (Kirkaldy, 1909) rev. stat., n. comb. is determined to be the correct name for the taxon Cicada marginata Olivier, 1790 and the new genus Cracenpsaltria n. gen. is erected for the taxon.  The distribution of C. brasiliorum rev. stat., n. comb. is expanded to include Bolivia and Peru.

Description of four new genera and five new species of cicadas from New Caledonia (Insecta: Hemiptera, Cicadoidea, Cicadidae).

PubMed

Delorme, Quentin

2017-03-13

The four endemic new genera Paulaudalna gen. nov., Bispinalta gen. nov., Melanesiana gen. nov. and Strepuntalna gen. nov. are described from New Caledonia. The genus Paulaudalna includes two new species: Paulaudalna marginata sp. nov., as type species, and Paulaudalna amieuensis sp. nov. The genus Bispinalta is described from the new species Bispinalta caledonica sp. nov., and comes from bushy forest at summit of pic Ouitchambo at Boulouparis. The genus Melanesiana is described from the new species Melanesiana kataouii sp. nov., that is found in bushy forest at massif du Kepeto (Pouembout). The genus Strepuntalna is represented by the new species Strepuntalna. renaudetii sp. nov., and is encountered in bushy forest of south and central chain. Except Paulaudalna amieuensis, male calling songs of the new species are described from field recordings.

A New Species of the Genus Parasa Moore (Lepidoptera: Limacodidae) from Yemen

PubMed Central

Solovyev, Alexey V.; Saldaitis, Aidas

2010-01-01

A new species Parasa dusii Solovyev and Saldaitis from northern Yemen is described (holotype in Museum Witt, Munich; Germany). The species has tendency to lose the green pigment typical for other congeners. It is provisionally placed into the genus Parasa Moore, 1859 where it is closely related to P. divisa West, 1940, P. catori Bethune-Baker, 1911, P. marginata West, 1940, P. thamia Rungs, 1951, P. dentina Hering, 1932, P. ananii Karsch, 1896, and P. semiochracea Hering, 1933. The relationship of the new species to these African species suggests its secondary penetration into the Arabian Peninsula from an origin in tropical Africa. The problems of monophyly of the genus Parasa and several associated genera are briefly discussed. All important characters of the new species, and some related species, are illustrated. PMID:21265613

The millipede genus Enghoffosoma Golovatch, 1993 recorded in Vietnam
for the first time, with descriptions of three new species (Diplopoda, Polydesmida, Paradoxosomatidae).

PubMed

Nguyen, Anh D; Golovatch, Sergei I

2016-07-20

The genus Enghoffosoma is recorded from Vietnam for the first time, altogether with six species involved. Two species, E. lanceolatum Likhitrakarn et al., 2014 and E. anchoriforme Likhitrakarn et al., 2014, were previously known only from the western part of Laos, thus being new to the fauna of Vietnam. One more species, Sundanina fedorenkoi Golovatch, 2016, very recently described from Dak Lak Province, southern Vietnam, is formally transferred to Enghoffosoma, comb. nov., based both on a strict topotype and a sample from Lam Dong Province, southern Vietnam. Three other species are described as new: E. triangulare sp. nov., E. retrorsum sp. nov. and E. digitatum sp. nov. A key to all six species of Enghoffosoma currently known to occur in Vietnam is provided.

Pleistocene survival of an archaic dwarf baleen whale (Mysticeti: Cetotheriidae)

NASA Astrophysics Data System (ADS)

Boessenecker, Robert W.

2013-04-01

Pliocene baleen whale assemblages are characterized by a mix of early records of extant mysticetes, extinct genera within modern families, and late surviving members of the extinct family Cetotheriidae. Although Pleistocene baleen whales are poorly known, thus far they include only fossils of extant genera, indicating Late Pliocene extinctions of numerous mysticetes alongside other marine mammals. Here a new fossil of the Late Neogene cetotheriid mysticete Herpetocetus is reported from the Lower to Middle Pleistocene Falor Formation of Northern California. This find demonstrates that at least one archaic mysticete survived well into the Quaternary Period, indicating a recent loss of a unique niche and a more complex pattern of Plio-Pleistocene faunal overturn for marine mammals than has been previously acknowledged. This discovery also lends indirect support to the hypothesis that the pygmy right whale ( Caperea marginata) is an extant cetotheriid, as it documents another cetotheriid nearly surviving to modern times.

Benthic foraminifera show some resilience to ocean acidification in the northern Gulf of California, Mexico.

PubMed

Pettit, L R; Hart, M B; Medina-Sánchez, A N; Smart, C W; Rodolfo-Metalpa, R; Hall-Spencer, J M; Prol-Ledesma, R M

2013-08-30

Extensive CO2 vents have been discovered in the Wagner Basin, northern Gulf of California, where they create large areas with lowered seawater pH. Such areas are suitable for investigations of long-term biological effects of ocean acidification and effects of CO2 leakage from subsea carbon capture storage. Here, we show responses of benthic foraminifera to seawater pH gradients at 74-207m water depth. Living (rose Bengal stained) benthic foraminifera included Nonionella basispinata, Epistominella bradyana and Bulimina marginata. Studies on foraminifera at CO2 vents in the Mediterranean and off Papua New Guinea have shown dramatic long-term effects of acidified seawater. We found living calcareous benthic foraminifera in low pH conditions in the northern Gulf of California, although there was an impoverished species assemblage and evidence of post-mortem test dissolution. Copyright © 2013 Elsevier Ltd. All rights reserved.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hackstein, J.H.P.; Stumm, C.K.

The authors have screened more than 110 representatives of the different taxa of terrestrial arthropods for methane production in order to obtain additional information about the origins of biogenic methane. Methanogenic bacteria occur in the hindguts of nearly all tropical representatives of millipedes (Diplopoda), cockroaches (Blattaria), termites (Isoptera), and scarab beetles (Scarabaeidae), while such methanogens are absent from 66 other arthropod species investigated. Three types of symbiosis were found: in the first type, the arthropod's hindgut is colonized by free methanogenic bacteria; in the second type, methanogens are closely associated with chitinous structures formed by the host's hindgut; the thirdmore » type is mediated by intestinal anaerobic protists with intracellular methanogens. Such symbiotic associations are likely to be a characteristic property of the particular taxon. Since these taxa represent many families with thousands of species, the world populations of methane-producing arthropods constitute an enormous biomass. The authors show that arthropod symbionts can contribute substantially to atmospheric methane.« less

Diet composition of the invasive cane toad (Chaunus marinus) on Rota, Northern Mariana Islands

USGS Publications Warehouse

Reed, R.N.; Bakkegard, K.A.; Desy, G.E.; Plentovich, S.M.

2007-01-01

The cane or marine toad (Chaunus marinus, formerly Bufo marinus) was introduced to the Northern Mariana Islands starting in the 1930s. The effects of this exotic predator on native vertebrates (especially lizards) are largely unknown. We analysed the stomach contents of 336 cane toads collected from the island of Rota, with the goal of estimating the level of toad predation on native vertebrates. Beetles, ants, millipedes, and grasshoppers/crickets comprised the majority of prey classes consumed by toads. The introduced Brahminy blindsnake (Ramphotyphlops braminus; N = 6) and conspecific cane toads (N = 4) were the vertebrates most commonly found in toad stomachs. Skinks (Emoia; N = 2) were the only native vertebrates represented in our sample. The small numbers of nocturnal terrestrial vertebrates native to Rota likely translates to relatively low rates of predation by cane toads on native vertebrates.

Chemotypes and Biomarkers of Seven Species of New Caledonian Liverworts from the Bazzanioideae Subfamily.

PubMed

Métoyer, Benjamin; Lebouvier, Nicolas; Hnawia, Edouard; Herbette, Gaëtan; Thouvenot, Louis; Asakawa, Yoshinori; Nour, Mohammed; Raharivelomanana, Phila

2018-06-05

Volatile components of seven species of the Bazzanioideae sub-family (Lepidoziaceae) native to New Caledonia, including three endemic species ( Bazzania marginata , Acromastigum caledonicum and A. tenax ), were analyzed by GC-FID-MS in order to index these plants to known or new chemotypes. Detected volatile constituents in studied species were constituted mainly by sesquiterpene, as well as diterpene compounds. All so-established compositions cannot successfully index some of them to known chemotypes but afforded the discovery of new chemotypes such as cuparane/fusicoccane. The major component of B. francana was isolated and characterized as a new zierane-type sesquiterpene called ziera-12(13),10(14)-dien-5-ol ( 23 ). In addition, qualitative intraspecies variations of chemical composition were very important particularly for B. francana which possessed three clearly defined different compositions. We report here also the first phytochemical investigation of Acromastigum species. Moreover, crude diethyl ether extract of B. vitatta afforded a new bis(bibenzyl) called vittatin ( 51 ), for which a putative biosynthesis was suggested.

Two new Lophoturus species (Diplopoda, Polyxenida, Lophoproctidae) from Queensland, Australia

PubMed Central

Huynh, Cuong; Veenstra, Anneke A.

2018-01-01

Abstract Lophoturus queenslandicus Verhoeff, 1924 was the first penicillate millipede in the family Lophoproctidae collected from Cairns, a tropical region in Queensland, Australia, to be formally described. Specimens collected from this region in a recent study had the morphological characters known to define this genus. However, their body form and length, as well as dorsal colouration proved to be different, suggesting the possibility of more than one Lophoturus species. This assertion was supported by the results of a phylogenetic analysis of DNA extracted and sequenced using 18S and COI regions from L. queenslandicus and two undescribed species from this genus. Specimens preserved in ethanol can prove difficult to confidently identify to species level because their colour gradually fades. Examination of live specimens with their body colour visible, together with morphological characters and DNA analysis is the most reliable way of correctly distinguishing between these three species. Two new species, L. boondallus sp. n. and L. molloyensis sp. n. collected in Queensland, Australia are described. PMID:29706774

Distribution, diversity patterns and faunogenesis of the millipedes (Diplopoda) of the Himalayas

PubMed Central

Golovatch, Sergei I.; Martens, Jochen

2018-01-01

Abstract The Himalayas support a highly rich, diverse, multi-layered, mostly endemic diplopod fauna which presently contains >270 species, 53 genera, 23 families and 13 orders. This is the result of mixing the ancient, apparently Tertiary and younger, Plio-Pleistocene elements of various origins, as well as the most recent anthropochore (= man-mediated) introductions. At the species and, partly, generic levels, the fauna is largely autochthonous and sylvicolous, formed through abounding in situ radiation and vicariance events. In general, the species from large genera and families tend to occupy a wide range of altitudes, but nearly each of the constituent species shows a distribution highly localized both horizontally and altitudinally, yet quite often with sympatry or even syntopy involved. The bulk of the fauna is Indo-Malayan in origin, with individual genera or families shared with those of SE Asia (mostly) and/or S India (few). Sino-Himalayan and, especially, Palaearctic components are subordinate, but also clearly distinguishable. PMID:29706770

Ripples on Cratered Terrain North of Hesperia Planum

NASA Technical Reports Server (NTRS)

1999-01-01

This is a Mars Orbiter Camera view of the cratered uplands located between the Amenthes Fossae and Hesperia Planum. This ancient, cratered surface sports a covering of windblown dunes and ripples oriented in somewhat different directions. The dunes are bigger and their crests generally run east-west across the image. The ripples are smaller and their crests run in a more north-south direction. The pattern they create together makes some of the dunes almost appear as if they are giant millipedes!This picture covers an area only 3 kilometers (1.9 miles) wide. Illumination is from the top.

Malin Space Science Systems and the California Institute of Technology built the MOC using spare hardware from the Mars Observer mission. MSSS operates the camera from its facilities in San Diego, CA. The Jet Propulsion Laboratory's Mars Surveyor Operations Project operates the Mars Global Surveyor spacecraft with its industrial partner, Lockheed Martin Astronautics, from facilities in Pasadena, CA and Denver, CO.

Plant composition, pharmacological properties and mutagenic evaluation of a commercial Zulu herbal mixture: Imbiza ephuzwato.

PubMed

Ndhlala, A R; Finnie, J F; Van Staden, J

2011-01-27

Imbiza ephuzwato is a traditional herbal tonic made from a mixture of extracts of roots, bulbs, rhizomes and leaves of 21 medicinal plants and is used in traditional medicine as a multipurpose remedy. To compile and investigate the bioactivity and mutagenic effects of extracts of the 21 plant species used in the preparation of Imbiza ephuzwato herbal tonic. The 21 plant species used to make Imbiza ephuzwato herbal mixture were each investigated for their pharmacological properties. Petroleum ether (PE), dichloromethane (DCM), 80% ethanol (EtOH) and water extracts of the 21 plants were evaluated against two gram-positive, two gram-negative bacteria and a fungus Candida albicans. The extracts were also evaluated for their inhibitory effects against cyclooxygenase (COX-1 and -2) and acetylcholinesterase AChE enzymes. Mutagenic effects of the water extracts were evaluated using the Ames test. Gunnera perpensa and Rubia cordifolia were the only plant species used to manufacture Imbiza ephuzwato that had water extracts which showed good antibacterial activity. The extracts of G. perpensa (EtOH), Hypericum aethiopicum (DCM) and Urginea physodes (EtOH) showed the best antifungal activity. The water extracts of H. aethiopicum, G. perpensa, Drimia robusta, Vitellariopsis marginata, Scadoxus puniceus and Momordica balsamina showed percentage inhibition of COX-1 that was over 70%. For COX-2 enzyme, the water extracts of G. perpensa, Cyrtanthus obliquus, M. balsamina and Tetradenia riparia exhibited inhibitory activity above 70%. Water extracts of G. perpensa, C. obliquus, V. marginata, Asclepias fruticosa and Watsonia densiflora showed good AChE inhibitory activity (>80%). The Ames test results revealed that all the water extracts of the 21 plant species used to make Imbiza ephuzwato were non-mutagenic towards the Salmonella typhimurium TA98 strain for the assay with and without S9 metabolic activation. In contrast, Imbiza ephuzwato showed mutagenic effects after exposure to S9 enzyme mixture. The observed activities of some plant extracts, if supported by other confirmatory tests, may justify their inclusion in the makeup of Imbiza ephuzwato herbal mixture as well as their use in traditional medicine. Further studies aimed at investigating possible synergistic effects as a result of mixing plant extracts are necessary. The reported mutagenicity in Imbiza ephuzwato could be as a result of interaction of biomolecules in the heterogeneous mixture, yielding compounds that are converted to mutagenic agents by xenobiotic metabolizing enzymes. It is therefore important to carry out further studies aimed at identifying and eliminating the sources of the mutagenic compounds in the heterogeneous mixture. Copyright © 2010 Elsevier Ireland Ltd. All rights reserved.

Science foundation Chapter 5 Appendix 5.1: Case study marsh macroinvertebrates

USGS Publications Warehouse

Brusati, Elizabeth; Woo, Isa

2015-01-01

This case study includes representative macroinvertebrates that live in the marsh plain, its associated channels and pannes (ponds), and the marsh-upland transition zone. While less visible than animals such as birds, invertebrates play important roles in physical and biological processes (e.g., burrowing activity and channel bank erosion, and detritivores breaking down organic matter) and are important food resources for higher trophic animals. Common invertebrates in these habitats include plant-hopper (Prokelisia marginata), beach hopper (Traskorchestia traskiana), pygmy blue butterfly (Brephidium exilis), inchworm moth (Perizoma custodiata), western tanarthus beetle (Tanarthus occidentalis), salt marsh mosquitoes (Aedes spp.; Maffei 2000a, Maffei 2000b, Maffei 2000c), crabs (native Hemigrapsus oregonensis and introduced Carcinus maenas), copepods, snails (e.g. native California horn snail Cerithidea californica and introduced Ilyanassa obsoleta, Myosotella myosotis), polychaetes (e.g. Capitella spp., Eteone californica, Neanthes brandti), small clams (Macoma petalum/M. balthica), and corophiid amphipods (Cohen 2011, Race 1982, Robinson et al. 2011). Some common species were described in detail in the San Francisco Bay Goals Project Species and Community Profiles (Goals Project 2000).

Bioconversion of Agricultural Waste to Ethanol by SSF Using Recombinant Cellulase from Clostridium thermocellum

PubMed Central

Mutreja, Ruchi; Das, Debasish; Goyal, Dinesh; Goyal, Arun

2011-01-01

The effect of different pretreatment methods, temperature, and enzyme concentration on ethanol production from 8 lignocellulosic agrowaste by simultaneous saccharification and fermentation (SSF) using recombinant cellulase and Saccharomyces cerevisiae were studied. Recombinant cellulase was isolated from E. coli BL21 cells transformed with CtLic26A-Cel5-CBM11 full-length gene from Clostridium thermocellum and produced in both batch and fed-batch processes. The maximum cell OD and specific activity in batch mode were 1.6 and 1.91 U/mg, respectively, whereas in the fed-batch mode, maximum cell OD and specific activity were 3.8 and 3.5 U/mg, respectively, displaying a 2-fold increase. Eight substrates, Syzygium cumini (jamun), Azadirachta indica (neem), Saracens indica (asoka), bambusa dendrocalmus (bamboo), Populas nigra (poplar), Achnatherum hymenoides (wild grass), Eucalyptus marginata (eucalyptus), and Mangifera indica (mango), were subjected to SSF. Of three pretreatments, acid, alkali, and steam explosion, acid pretreatment Syzygium cumini (Jamun) at 30°C gave maximum ethanol yield of 1.42 g/L. PMID:21811671

Bioconversion of Agricultural Waste to Ethanol by SSF Using Recombinant Cellulase from Clostridium thermocellum.

PubMed

Mutreja, Ruchi; Das, Debasish; Goyal, Dinesh; Goyal, Arun

2011-01-01

The effect of different pretreatment methods, temperature, and enzyme concentration on ethanol production from 8 lignocellulosic agrowaste by simultaneous saccharification and fermentation (SSF) using recombinant cellulase and Saccharomyces cerevisiae were studied. Recombinant cellulase was isolated from E. coli BL21 cells transformed with CtLic26A-Cel5-CBM11 full-length gene from Clostridium thermocellum and produced in both batch and fed-batch processes. The maximum cell OD and specific activity in batch mode were 1.6 and 1.91 U/mg, respectively, whereas in the fed-batch mode, maximum cell OD and specific activity were 3.8 and 3.5 U/mg, respectively, displaying a 2-fold increase. Eight substrates, Syzygium cumini (jamun), Azadirachta indica (neem), Saracens indica (asoka), bambusa dendrocalmus (bamboo), Populas nigra (poplar), Achnatherum hymenoides (wild grass), Eucalyptus marginata (eucalyptus), and Mangifera indica (mango), were subjected to SSF. Of three pretreatments, acid, alkali, and steam explosion, acid pretreatment Syzygium cumini (Jamun) at 30°C gave maximum ethanol yield of 1.42 g/L.

Ingested and biomineralized magnetic material in the prey Neocapritermes opacus termite: FMR characterization

NASA Astrophysics Data System (ADS)

de Oliveira, J. F.; Alves, O. C.; Esquivel, D. M. S.; Wajnberg, E.

2008-03-01

The temperature dependence of Ferromagnetic Resonance spectra, from 5 K to 280 K, was used to study the magnetic material present in Neocapritermes opacus termite, the only prey of the Pachycondyla marginata ant. The analysis of the resonant field and peak-to-peak linewidth allowed estimating the particle diameters and the effective anisotropy energy density, KEFF, as a sum of the bulk and surface contributions. It allowed to magnetically distinguish the particles of termites as collected in field from those of termites after 3 days under a cellulose diet, introduced to eliminate ingested/digested material. The data also, suggest the presence of oriented magnetite nanoparticles with diameters of 11.6 ± 0.3 nm in termites as collected in field and (14.0 ± 0.4 nm) in that under a cellulose diet. Differences between their KEFF and its components are also observed. Two transitions are revealed in the resonant field temperature dependence, one at about 50 K that was associated to surface effects and the other at about 100 K attributed to the Verwey transition.

Contribution of gall microscopic structure to taxonomy of gallicolous aphids on Pistacia.

PubMed

Álvarez, R; Martinez, J-J I; Muñoz-Viveros, A L; Molist, P; Abad-González, J; Nieto Nafría, J M

2016-09-01

Aphids inducing galls on Pistacia plants belong to the tribe Fordini. According to the Heie & Wegierek classification, the genera are grouped into three subtribes. Previous microscopic studies showed that this taxonomy is not consistent with the histological characteristics of the galls. In this paper, galls induced by Aplonerura lentisci, Asiphonella cynodonti, Forda riccobonii, Slavun wertheimae and Smynthurodes betae were analyzed for the first time, as well as nine other galls previously described. Based on histological features three groups of galls can be establish: the first group comprises closed galls, induced by Baizongia pistaciae, Geoica utricularia, Rectinasus buxtoni and Slavun wertheimae; the second group includes two species of Geopemphigus (G. blackmani and G. torsus), and the third one is divided into two subgroups, the first comprises Aplonerura lentisci, Asiphonella cynodonti and Geopemphigus morral, and the second that includes Forda formicaria, F. marginata, F. riccobonii, Paracletus cimiciformis and Smynthurodes betae. An identification key of species based on microscopic features of galls is presented. © 2016 German Botanical Society and The Royal Botanical Society of the Netherlands.

How whales used to filter: exceptionally preserved baleen in a Miocene cetotheriid.

PubMed

Marx, Felix G; Collareta, Alberto; Gioncada, Anna; Post, Klaas; Lambert, Olivier; Bonaccorsi, Elena; Urbina, Mario; Bianucci, Giovanni

2017-08-01

Baleen is a comb-like structure that enables mysticete whales to bulk feed on vast quantities of small prey, and ultimately allowed them to become the largest animals on Earth. Because baleen rarely fossilises, extremely little is known about its evolution, structure and function outside the living families. Here we describe, for the first time, the exceptionally preserved baleen apparatus of an entirely extinct mysticete morphotype: the Late Miocene cetotheriid, Piscobalaena nana, from the Pisco Formation of Peru. The baleen plates of P. nana are closely spaced and built around relatively dense, fine tubules, as in the enigmatic pygmy right whale, Caperea marginata. Phosphatisation of the intertubular horn, but not the tubules themselves, suggests in vivo intertubular calcification. The size of the rack matches the distribution of nutrient foramina on the palate, and implies the presence of an unusually large subrostral gap. Overall, the baleen morphology of Piscobalaena likely reflects the interacting effects of size, function and phylogeny, and reveals a previously unknown degree of complexity in modern mysticete feeding evolution. © 2017 Anatomical Society.

Accumulation of Methylmercury in Invertebrates and Masked Shrews (Sorex cinereus) at an Upland Forest-Peatland Interface in Northern Minnesota, USA.

PubMed

Tavshunsky, Ilana; Eggert, Susan L; Mitchell, Carl P J

2017-12-01

Mercury (Hg) methylation is often elevated at the terrestrial-peatland interface, but methylmercury (MeHg) production at this "hot spot" has not been linked with in situ biotic accumulation. We examined total Hg and MeHg levels in peat, invertebrates and tissues of the insectivore Sorex cinereus (masked shrew), inhabiting a terrestrial-peatland ecotone in northern Minnesota, USA. Mean MeHg concentrations in S. cinereus (71 ng g -1 ) fell between concentrations measured in spiders (mean 70-140 ng g -1 ), and ground beetles and millipedes (mean 29-42 ng g -1 ). Methylmercury concentrations in S. cinereus increased with age and differed among tissues, with highest concentrations in kidneys and muscle, followed by liver and brain. Nearly all Hg in S. cinereus was in the methylated form. Overall, the high proportional accumulation of MeHg in peat at the site (3.5% total Hg as MeHg) did not lead to particularly elevated concentrations in invertebrates or shrews, which are below values considered a toxicological risk.

Suppression of savanna ants alters invertebrate composition and influences key ecosystem processes.

PubMed

Parr, C L; Eggleton, P; Davies, A B; Evans, T A; Holdsworth, S

2016-06-01

In almost every ecosystem, ants (Hymenoptera: Formicidae) are the dominant terrestrial invertebrate group. Their functional value was highlighted by Wilson (1987) who famously declared that invertebrates are the "little things that run the world." However, while it is generally accepted that ants fulfil important functions, few studies have tested these assumptions and demonstrated what happens in their absence. We report on a novel large-scale field experiment in undisturbed savanna habitat where we examined how ants influence the abundance of other invertebrate taxa in the system, and affect the key processes of decomposition and herbivory. Our experiment demonstrated that ants suppressed the abundance and activity of beetles, millipedes, and termites, and also influenced decomposition rates and levels of herbivory. Our study is the first to show that top-down control of termites by ants can have important ecosystem consequences. Further studies are needed to elucidate the effects ant communities have on other aspects of the ecosystem (e.g., soils, nutrient cycling, the microbial community) and how their relative importance for ecosystem function varies among ecosystem types (e.g., savanna vs. forest).

A Link No Longer Missing: New Evidence for the Cetotheriid Affinities of Caperea.

PubMed

Marx, Felix G; Fordyce, R Ewan

2016-01-01

The origins of the enigmatic pygmy right whale Caperea marginata, the only living member of its subfamily (Neobalaeninae), are an outstanding mystery of cetacean evolution. Its strikingly disparate morphology sets Caperea apart from all other whales, and has turned it into a wildcard taxon that holds the key to understanding modern baleen whale diversity. Morphological cladistics generally ally this species with right whales, whereas molecular analyses consistently cluster it with rorquals and grey whales (Balaenopteroidea). A recent study potentially resolved this conflict by proposing that Caperea belongs with the otherwise extinct Cetotheriidae, but has been strongly criticised on morphological grounds. Evidence from the neobalaenine fossil record could potentially give direct insights into morphological transitions, but is currently limited to just a single species: the Late Miocene Miocaperea pulchra, from Peru. We show that Miocaperea has a highly unusual morphology of the auditory region, resulting from a-presumably feeding-related-strengthening of the articulation of the hyoid apparatus with the skull. This distinctive arrangement is otherwise only found in the extinct Cetotheriidae, which makes Miocaperea a "missing link" that demonstrates the origin of pygmy right whales from cetotheriids, and confirms the latter's resurrection from the dead.

A Link No Longer Missing: New Evidence for the Cetotheriid Affinities of Caperea

PubMed Central

Marx, Felix G.; Fordyce, R. Ewan

2016-01-01

The origins of the enigmatic pygmy right whale Caperea marginata, the only living member of its subfamily (Neobalaeninae), are an outstanding mystery of cetacean evolution. Its strikingly disparate morphology sets Caperea apart from all other whales, and has turned it into a wildcard taxon that holds the key to understanding modern baleen whale diversity. Morphological cladistics generally ally this species with right whales, whereas molecular analyses consistently cluster it with rorquals and grey whales (Balaenopteroidea). A recent study potentially resolved this conflict by proposing that Caperea belongs with the otherwise extinct Cetotheriidae, but has been strongly criticised on morphological grounds. Evidence from the neobalaenine fossil record could potentially give direct insights into morphological transitions, but is currently limited to just a single species: the Late Miocene Miocaperea pulchra, from Peru. We show that Miocaperea has a highly unusual morphology of the auditory region, resulting from a–presumably feeding-related–strengthening of the articulation of the hyoid apparatus with the skull. This distinctive arrangement is otherwise only found in the extinct Cetotheriidae, which makes Miocaperea a “missing link” that demonstrates the origin of pygmy right whales from cetotheriids, and confirms the latter’s resurrection from the dead. PMID:27711216

Intraspecific and interspecific polyploidy of Brazilian species of the genus Inga (Leguminosae: Mimosoideae).

PubMed

Figueiredo, M F; Bruno, R L A; Barros e Silva, A E; Nascimento, S; Oliveira, I G; Felix, L P

2014-04-29

We investigated the karyotypes of 13 species of six sections of the genus Inga (Leguminosae-Mimosoideae) from Brazil. We used conventional Giemsa staining to identify numerical chromosomal variations and looked for karyotypic evolutionary patterns. The karyotypes generally had small chromosomes, varying from metacentric to submetacentric, with a basic number x=13. Nine of the species showed 2n=2x=26 (I. thibaudiana, I. cayennensis, I. ingoides, I. edulis, I. vera, I. subnuda, I. striata, I. bollandii, and Inga sp), while 2n=4x=52 was seen in a population of Inga cylindrical and of I. capitata, and in five populations of I. laurina. Additionally, 2n=8x=104 was observed in a population of I. cayennensis. Eight of these counts were new, while the counts of 2n=52 for I. laurina and 2n=26 for I. marginata, I. vera, I. subnuda, and I. edulis confirmed previous studies. We did not find cytological stability among the sections studied, with occurrence of significant intra- and inter-specific numerical variations. We conclude that polyploidy has played a significant role in karyotypic evolution in this group and that it occurred independently in several sections of the genus.

Insects Associated With Jatropha curcas Linn. (Euphorbiaceae) in West Niger

PubMed Central

Habou, Zakari Abdoul; Adam, Toudou; Haubruge, Eric; Mergeai, Guy; Verheggen, François J.

2014-01-01

Abstract Jatropha curcas has been introduced into Niger since 2004 by International Crops Research Institute for the Semi-Arid Tropics (ICRISAT). This plant is cultivated for its oil, which can be used as a Biofuel. Through direct and indirect insect collection methods, an inventory of the insect associated with J. curcas has been conducted in Western Niger during two rainy seasons (from June to October) in 2010 and 2011. We have identified insects belonging to the following families: Acrididae ( Oedaleus senegalensis Krauss , Oedaleus nigeriensis Uvarov, Heteracris leani Uvarov, Catantops stramineus Walker, Parga cyanoptera Uvarov, and Acanthacris ruficornis citrina Audinet-Serville), Pyrgomorphidae ( Poekilocerus bufonius hieroglyphicus Klug), Cetoniidae ( Pachnoda interrupta Olivier, Pachnoda marginata aurantia Herbst, Pachnoda sinuata Heinrich and McClain, and Rhabdotis sobrina Gory and Percheron), Meloidae ( Decapotoma lunata Pallas), Pentatomidae ( Agonoscelis versicoloratus Dallas, Nezara viridula Linn, and Antestia sp. Kirkaldy), Coreidae ( Leptoglossus membranaceus Fabricius and Cletus trigonus Thunberg), and Scutelleridae ( Calidea panaethiopica Kirkaldy). Origin and potential impact on J. curcas of all these insect species are presented and discussed. The lower insect’s diversity indexes are observed in 2010 and 2011 for Niamey, Saga, and Gaya because of semi-arid character of the Sahelian area. PMID:25528746

Use of medicinal plants for the treatment of measles in Nigeria.

PubMed

Sonibare, M A; Moody, J O; Adesanya, E O

2009-03-18

The present study was an ethnobotanical survey of three Local Government areas of the Ijebu area of Ogun State in southwest Nigeria for plants used in the treatment of measles. Unstructured interviews were conducted among both urban and rural dwellers of three major groups of Ijebu people inhabiting the area (Ijebu North, Ijebu northeast and Ijebu Ode Local Governments). A total of 20 respondents constituted by herbalists, herbsellers and old people that have privileged information on the plants used in the treatment of measles among children were encountered during the survey. Twenty-three plant species belonging to 18 Angiosperm families were said to possess curative properties for the cure of measles among the local populace. Amongst the most frequently used plants are Elytraria marginata Vahl, Peperomia pellucida (L.) Humb., Bonpl. & Kunth, Vernonia amygdalina Del., Momordica charantia L., Newbouldia laevis (P. Beauv.) Seem. ex Bureau, and Ocimum gratissimum L. The most frequently mentioned family is Cucurbitaceae. The mode of preparation and recommended dosages are enumerated in this paper. The results of the study call for an urgent need of the introduction of a strategy for the conservation of indigenous medicinal plants in the area.

Looking for long-term changes in hydroid assemblages (Cnidaria, Hydrozoa) in Alboran Sea (South-Western Mediterranean): a proposal of a monitoring point for the global warming

NASA Astrophysics Data System (ADS)

González-Duarte, Manuel María; Megina, Cesar; Piraino, Stefano

2014-12-01

In the last 20-30 years, the temperature of the Mediterranean Sea has increased and global warming is allowing the establishment of tropical-affinity species into more temperate zones. Sessile communities are particularly useful as a baseline for ecological monitoring; however, a lack of historical data series exists for sessile marine organisms without commercial interest. Hydroids are ubiquitous components of the benthic sessile fauna on rocky shores and have been used as bio-indicators of environmental conditions. In this study on the benthic hydroid assemblages of the Chafarinas Islands (Alboran Sea, South-Western Mediterranean), we characterized the hydroid assemblages, identified the bathymetric gradients, and compared them with a previous study carried out in 1991. Hydroid assemblages showed a significant difference both between year and among depths. Furthermore, eight species not present in 1991 were found, including two possible new species and the tropical and subtropical species Sertularia marginata. Due to its strategic position at the entrance of the Mediterranean and the existence of previous data on hydroid assemblages, the Chafarinas Islands are proposed as a possible monitoring point for entrance of Atlantic tropical species into the Mediterranean Sea.

Shallow water heterobranch sea slugs (Gastropoda: Heterobranchia) from the Región de Atacama, northern Chile

PubMed Central

Valdés, Ángel

2016-01-01

The coast of northern Chile has been sparsely studied in regards to its invertebrate fauna, with just a few works reviewing the distribution of local mollusks. This work presents a survey of the shallow water heterobranch sea slugs currently occurring around the port of Caldera (27 °S), in the Región de Atacama, northern Chile. Eight species of sea slugs were found in this study: Aplysiopsis cf. brattstroemi (Marcus, 1959), Baptodoris peruviana (d’Orbigny, 1837), Diaulula variolata (d’Orbigny, 1837), Doris fontainii d’Orbigny, 1837, Onchidella marginata (Couthouy in Gould, 1852), Phidiana lottini (Lesson, 1831), Tyrinna delicata (Abraham, 1877) and the new species Berthella schroedli sp. nov., described herein. All of the species found in the area are endemic to South America, having distributions in the southeastern Pacific and South Atlantic Oceans, from Ancash, Perú to Peninsula Valdés, Argentina, and two of them represent species which are endemic to the Chilean coasts (Aplysiopsis cf. brattstroemi and Berthella schroedli). The finding of a previously undescribed species emphasizes the need of further surveys, particularly in subtidal and deeper waters, in order to improve the knowledge on this neglected fauna in Atacama. PMID:27168975

Phlorotannins from Alaskan Seaweed Inhibit Carbolytic Enzyme Activity

PubMed Central

Kellogg, Joshua; Grace, Mary H.; Lila, Mary Ann

2014-01-01

Global incidence of type 2 diabetes has escalated over the past few decades, necessitating a continued search for natural sources of enzyme inhibitors to offset postprandial hyperglycemia. The objective of this study was to evaluate coastal Alaskan seaweed inhibition of α-glucosidase and α-amylase, two carbolytic enzymes involved in serum glucose regulation. Of the six species initially screened, the brown seaweeds Fucus distichus and Alaria marginata possessed the strongest inhibitory effects. F. distichus fractions were potent mixed-mode inhibitors of α-glucosidase and α-amylase, with IC50 values of 0.89 and 13.9 μg/mL, respectively; significantly more efficacious than the pharmaceutical acarbose (IC50 of 112.0 and 137.8 μg/mL, respectively). The activity of F. distichus fractions was associated with phlorotannin oligomers. Normal-phase liquid chromatography-mass spectrometry (NPLC-MS) was employed to characterize individual oligomers. Accurate masses and fragmentation patterns confirmed the presence of fucophloroethol structures with degrees of polymerization from 3 to 18 monomer units. These findings suggest that coastal Alaskan seaweeds are sources of α-glucosidase and α-amylase inhibitory phlorotannins, and thus have potential to limit the release of sugar from carbohydrates and thus alleviate postprandial hyperglycemia. PMID:25341030

The bipartite mitochondrial genome of Ruizia karukerae (Rhigonematomorpha, Nematoda).

PubMed

Kim, Taeho; Kern, Elizabeth; Park, Chungoo; Nadler, Steven A; Bae, Yeon Jae; Park, Joong-Ki

2018-05-10

Mitochondrial genes and whole mitochondrial genome sequences are widely used as molecular markers in studying population genetics and resolving both deep and shallow nodes in phylogenetics. In animals the mitochondrial genome is generally composed of a single chromosome, but mystifying exceptions sometimes occur. We determined the complete mitochondrial genome of the millipede-parasitic nematode Ruizia karukerae and found its mitochondrial genome consists of two circular chromosomes, which is highly unusual in bilateral animals. Chromosome I is 7,659 bp and includes six protein-coding genes, two rRNA genes and nine tRNA genes. Chromosome II comprises 7,647 bp, with seven protein-coding genes and 16 tRNA genes. Interestingly, both chromosomes share a 1,010 bp sequence containing duplicate copies of cox2 and three tRNA genes (trnD, trnG and trnH), and the nucleotide sequences between the duplicated homologous gene copies are nearly identical, suggesting a possible recent genesis for this bipartite mitochondrial genome. Given that little is known about the formation, maintenance or evolution of abnormal mitochondrial genome structures, R. karukerae mtDNA may provide an important early glimpse into this process.

Insects associated with Jatropha curcas Linn. (Euphorbiaceae) in west Niger.

PubMed

Habou, Zakari Abdoul; Adam, Toudou; Haubruge, Eric; Mergeai, Guy; Verheggen, François J

2014-01-01

Jatropha curcas has been introduced into Niger since 2004 by International Crops Research Institute for the Semi-Arid Tropics (ICRISAT). This plant is cultivated for its oil, which can be used as a Biofuel. Through direct and indirect insect collection methods, an inventory of the insect associated with J. curcas has been conducted in Western Niger during two rainy seasons (from June to October) in 2010 and 2011. We have identified insects belonging to the following families: Acrididae (Oedaleus senegalensis Krauss, Oedaleus nigeriensis Uvarov, Heteracris leani Uvarov, Catantops stramineus Walker, Parga cyanoptera Uvarov, and Acanthacris ruficornis citrina Audinet-Serville), Pyrgomorphidae (Poekilocerus bufonius hieroglyphicus Klug), Cetoniidae (Pachnoda interrupta Olivier, Pachnoda marginata aurantia Herbst, Pachnoda sinuata Heinrich and McClain, and Rhabdotis sobrina Gory and Percheron), Meloidae (Decapotoma lunata Pallas), Pentatomidae (Agonoscelis versicoloratus Dallas, Nezara viridula Linn, and Antestia sp. Kirkaldy), Coreidae (Leptoglossus membranaceus Fabricius and Cletus trigonus Thunberg), and Scutelleridae (Calidea panaethiopica Kirkaldy). Origin and potential impact on J. curcas of all these insect species are presented and discussed. The lower insect's diversity indexes are observed in 2010 and 2011 for Niamey, Saga, and Gaya because of semi-arid character of the Sahelian area. © The Author 2014. Published by Oxford University Press on behalf of the Entomological Society of America.

Ovarian development in a primitively eusocial wasp: social interactions affect behaviorally dominant and subordinate wasps in opposite directions relative to solitary females.

PubMed

Shukla, Shantanu; Pareek, Vidhi; Gadagkar, Raghavendra

2014-07-01

In many primitively eusocial wasp species new nests are founded either by a single female or by a small group of females. In the single foundress nests, the lone female develops her ovaries, lays eggs as well as tends her brood. In multiple foundress nests social interactions, especially dominance-subordinate interactions, result in only one 'dominant' female developing her ovaries and laying eggs. Ovaries of the remaining 'subordinate' cofoundresses remain suppressed and these individuals function as workers and tend the dominant's brood. Using the tropical, primitively eusocial polistine wasp Ropalidia marginata and by comparing wasps held in isolation and those kept as pairs in the laboratory, we demonstrate that social interactions affect ovarian development of dominant and subordinate wasps among the pairs in opposite directions, suppressing the ovaries of the subordinate member of the pair below that of solitary wasps and boosting the ovaries of dominant member of the pair above that of solitary females. In addition to being of physiological interest, such mirror image effects of aggression on the ovaries of the aggressors and their victims, suggest yet another mechanism by which subordinates can enhance their indirect fitness and facilitate the evolution of worker behavior by kin selection. Copyright © 2014 Elsevier B.V. All rights reserved.

Current indirect fitness and future direct fitness are not incompatible.

PubMed

Brahma, Anindita; Mandal, Souvik; Gadagkar, Raghavendra

2018-02-01

In primitively eusocial insects, many individuals function as workers despite being capable of independent reproduction. Such altruistic behaviour is usually explained by the argument that workers gain indirect fitness by helping close genetic relatives. The focus on indirect fitness has left open the question of whether workers are also capable of getting direct fitness in the future in spite of working towards indirect fitness in the present. To investigate this question, we recorded behavioural profiles of all wasps on six naturally occurring nests of Ropalidia marginata , and then isolated all wasps in individual plastic boxes, giving them an opportunity to initiate nests and lay eggs. We found that 41% of the wasps successfully did so. Compared to those that failed to initiate nests, those that did were significantly younger, had significantly higher frequency of self-feeding behaviour on their parent nests but were not different in the levels of work performed in the parent nests. Thus ageing and poor feeding, rather than working for their colonies, constrain individuals for future independent reproduction. Hence, future direct fitness and present work towards gaining indirect fitness are not incompatible, making it easier for worker behaviour to be selected by kin selection or multilevel selection. © 2018 The Author(s).

Profiling of Amatoxins and Phallotoxins in the Genus Lepiota by Liquid Chromatography Combined with UV Absorbance and Mass Spectrometry

PubMed Central

Sgambelluri, R. Michael; Epis, Sara; Sassera, Davide; Luo, Hong; Angelos, Evan R.; Walton, Jonathan D.

2014-01-01

Species in the mushroom genus Lepiota can cause fatal mushroom poisonings due to their content of amatoxins such as α-amanitin. Previous studies of the toxin composition of poisonous Lepiota species relied on analytical methods of low sensitivity or resolution. Using liquid chromatography coupled to UV absorbance and mass spectrometry, we analyzed the spectrum of peptide toxins present in six Italian species of Lepiota, including multiple samples of three of them collected in different locations. Field taxonomic identifications were confirmed by sequencing of the internal transcribed spacer (ITS) regions. For comparison, we also analyzed specimens of Amanita phalloides from Italy and California, a specimen of A. virosa from Italy, and a laboratory-grown sample of Galerina marginata. α-Amanitin, β-amanitin, amanin, and amaninamide were detected in all samples of L. brunneoincarnata, and α-amanitin and γ-amanitin were detected in all samples of L. josserandii. Phallotoxins were not detected in either species. No amatoxins or phallotoxins were detected in L. clypeolaria, L. cristata, L. echinacea, or L. magnispora. The Italian and California isolates of A. phalloides had similar profiles of amatoxins and phallotoxins, although the California isolate contained more β-amanitin relative to α-amanitin. Amaninamide was detected only in A. virosa. PMID:25098279

Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda)

PubMed Central

Spelda, Jörg; Reip, Hans S.; Oliveira–Biener, Ulla; Melzer, Roland R.

2011-01-01

Abstract We give a first account of our ongoing barcoding activities on Bavarian myriapods in the framework of the Barcoding Fauna Bavarica project and IBOL, the International Barcode of Life. Having analyzed 126 taxa (including 122 species) belonging to all major German chilopod and diplopod lineages, often using four or more specimens each, at the moment our species stock includes 82% of the diplopods and 65% of the chilopods found in Bavaria, southern Germany. The partial COI sequences allow correct identification of more than 95% of the current set of Bavarian species. Moreover, most of the myriapod orders and families appear as distinct clades in neighbour-joining trees, although the phylogenetic relationships between them are not always depicted correctly. We give examples of (1) high interspecific sequence variability among closely related species; (2) low interspecific variability in some chordeumatidan genera, indicating that recent speciations cannot be resolved with certainty using COI DNA barcodes; (3) high intraspecific variation in some genera, suggesting the existence of cryptic lineages; and (4) the possible polyphyly of some taxa, i.e. the chordeumatidan genus Ochogona. This shows that, in addition to species identification, our data may be useful in various ways in the context of species delimitations, taxonomic revisions and analyses of ongoing speciation processes. PMID:22303099

The chemistry of poisons in amphibian skin.

PubMed Central

Daly, J W

1995-01-01

Poisons are common in nature, where they often serve the organism in chemical defense. Such poisons either are produced de novo or are sequestered from dietary sources or symbiotic organisms. Among vertebrates, amphibians are notable for the wide range of noxious agents that are contained in granular skin glands. These compounds include amines, peptides, proteins, steroids, and both water-soluble and lipid-soluble alkaloids. With the exception of the alkaloids, most seem to be produced de novo by the amphibian. The skin of amphibians contains many structural classes of alkaloids previously unknown in nature. These include the batrachotoxins, which have recently been discovered to also occur in skin and feathers of a bird, the histrionicotoxins, the gephyrotoxins, the decahydroquinolines, the pumiliotoxins and homopumiliotoxins, epibatidine, and the samandarines. Some amphibian skin alkaloids are clearly sequestered from the diet, which consists mainly of small arthropods. These include pyrrolizidine and indolizidine alkaloids from ants, tricyclic coccinellines from beetles, and pyrrolizidine oximes, presumably from millipedes. The sources of other alkaloids in amphibian skin, including the batrachotoxins, the decahydroquinolines, the histrionicotoxins, the pumiliotoxins, and epibatidine, are unknown. While it is possible that these are produced de novo or by symbiotic microorganisms, it appears more likely that they are sequestered by the amphibians from as yet unknown dietary sources. PMID:7816854

Long-term effects of dredging operations program. Collation and interpretation of data for Times Beach confined disposal facility, Buffalo, New York. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stafford, E.A.; Simmers, J.W.; Rhett, R.G.

1991-06-01

This interim report, collates all data gathered for the Times Beach confined disposal facility (CDF), Buffalo, New York. This purpose of the studies at the CDF was to determine the mobility and potential hazard of contaminants known to be in the dredged material placed at Times Beach by sampling and analyzing various components of the developing ecosystems. Upland, wetland, and aquatic areas are represented within the CDF and, for each area, inventories of colonizing biota were made and samples collected for measurement of heavy metals and organic compound contaminants. Samples of dredged material, vegetation, and soil-dwelling invertebrates, and vertebrates havemore » been collected and heavy metal concentrations measured. Results suggest that the persistent contaminants, particularly cadmium, are concentrating in the leaf litter zone and moving into the detritivorous invertebrates. Highest concentrations of heavy metals were noted in earthworms. Earth worms, millipedes, woodlice, and spiders appeared to be target organisms for accumulation of heavy metals, and these groups contained higher concentrations of copper and cadmium than the other groups. Polychlorinated biphenyl (PCB) and polynuclear aromatic hydrocarbon contaminants in the dredged material were below machine detection limits in the vertebrate top-predators. Contaminant concentrations in water from ground water wells were below guidance limits.« less

Terrestrial invertebrates in the Rhynie chert ecosystem.

PubMed

Dunlop, Jason A; Garwood, Russell J

2018-02-05

The Early Devonian Rhynie and Windyfield cherts remain a key locality for understanding early life and ecology on land. They host the oldest unequivocal nematode worm (Nematoda), which may also offer the earliest evidence for herbivory via plant parasitism. The trigonotarbids (Arachnida: Trigonotarbida) preserve the oldest book lungs and were probably predators that practiced liquid feeding. The oldest mites (Arachnida: Acariformes) are represented by taxa which include mycophages and predators on nematodes today. The earliest harvestman (Arachnida: Opiliones) includes the first preserved tracheae, and male and female genitalia. Myriapods are represented by a scutigeromorph centipede (Chilopoda: Scutigeromorpha), probably a cursorial predator on the substrate, and a putative millipede (Diplopoda). The oldest springtails (Hexapoda: Collembola) were probably mycophages, and another hexapod of uncertain affinities preserves a gut infill of phytodebris. The first true insects (Hexapoda: Insecta) are represented by a species known from chewing (non-carnivorous?) mandibles. Coprolites also provide insights into diet, and we challenge previous assumptions that several taxa were spore-feeders. Rhynie appears to preserve a largely intact community of terrestrial animals, although some expected groups are absent. The known fossils are (ecologically) consistent with at least part of the fauna found around modern Icelandic hot springs.This article is part of a discussion meeting issue 'The Rhynie cherts: our earliest terrestrial ecosystem revisited'. © 2017 The Author(s).

Mutual medication in capuchin monkeys – Social anointing improves coverage of topically applied anti-parasite medicines

PubMed Central

Bowler, Mark; Messer, Emily J. E.; Claidière, Nicolas; Whiten, Andrew

2015-01-01

Wild and captive capuchin monkeys will anoint themselves with a range of strong smelling substances including millipedes, ants, limes and onions. Hypotheses for the function of the behaviour range from medicinal to social. However, capuchin monkeys may anoint in contact with other individuals, as well as individually. The function of social anointing has also been explained as either medicinal or to enhance social bonding. By manipulating the abundance of an anointing resource given to two groups of tufted capuchins, we tested predictions derived from the main hypotheses for the functions of anointing and in particular, social anointing. Monkeys engaged in individual and social anointing in similar proportions when resources were rare or common, and monkeys holding resources continued to join anointing groups, indicating that social anointing has functions beyond that of gaining access to resources. The distribution of individual and social anointing actions on the monkeys’ bodies supports a medicinal function for both individual and social anointing, that requires no additional social bonding hypotheses. Individual anointing targets hard-to-see body parts that are harder to groom, whilst social anointing targets hard-to-reach body parts. Social anointing in capuchins is a form of mutual medication that improves coverage of topically applied anti-parasite medicines. PMID:26456539

Mutual medication in capuchin monkeys - Social anointing improves coverage of topically applied anti-parasite medicines.

PubMed

Bowler, Mark; Messer, Emily J E; Claidière, Nicolas; Whiten, Andrew

2015-10-12

Wild and captive capuchin monkeys will anoint themselves with a range of strong smelling substances including millipedes, ants, limes and onions. Hypotheses for the function of the behaviour range from medicinal to social. However, capuchin monkeys may anoint in contact with other individuals, as well as individually. The function of social anointing has also been explained as either medicinal or to enhance social bonding. By manipulating the abundance of an anointing resource given to two groups of tufted capuchins, we tested predictions derived from the main hypotheses for the functions of anointing and in particular, social anointing. Monkeys engaged in individual and social anointing in similar proportions when resources were rare or common, and monkeys holding resources continued to join anointing groups, indicating that social anointing has functions beyond that of gaining access to resources. The distribution of individual and social anointing actions on the monkeys' bodies supports a medicinal function for both individual and social anointing, that requires no additional social bonding hypotheses. Individual anointing targets hard-to-see body parts that are harder to groom, whilst social anointing targets hard-to-reach body parts. Social anointing in capuchins is a form of mutual medication that improves coverage of topically applied anti-parasite medicines.

New records of Lophoproctus coecus Pocock, 1894 (Diplopoda, Polyxenida, Lophoproctidae) extend the range of the genus Lophoproctus

PubMed Central

Short, Megan

2015-01-01

Abstract The geographic distribution of the genus Lophoproctus Pocock, 1894 has greatly expanded with new records of the species Lophoproctus coecus Pocock, 1894, together with the reassignment of a number of millipedes formerly identified as Lophoproctus lucidus (Chalande, 1888). Lophoproctus coecus was found to be the sole representative of the family Lophoproctidae in collections examined from Crimea and the Caucasian region. The species was also identified from Iran and Kyrgyzstan. Lophoproctus specimens collected in Italy by Verhoeff were reassigned as Lophoproctus coecus with the exception of one specimen of Lophoproctus jeanneli (Brölemann, 1910) from Capri. These data were combined with all available information from the literature to look at the pattern of distribution of the four species in the genus. The range of the genus Lophoproctus extends from Portugal to Central Asia. Lophoproctus coecus is widespread from Italy eastward, while the morphologically very similar species Lophoproctus lucidus is confined to France and northern Africa. The two species have a narrow overlap in the Alpes Maritimes region of France. Lophoproctus jeanneli has a scattered coastal distribution around the Mediterranean Sea. The troglobitic species Lophoproctus pagesi (Condé, 1982) has only been recorded from a cave on Majorca, Spain. PMID:26257544

Termites promote resistance of decomposition to spatiotemporal variability in rainfall.

PubMed

Veldhuis, Michiel P; Laso, Francisco J; Olff, Han; Berg, Matty P

2017-02-01

The ecological impact of rapid environmental change will depend on the resistance of key ecosystems processes, which may be promoted by species that exert strong control over local environmental conditions. Recent theoretical work suggests that macrodetritivores increase the resistance of African savanna ecosystems to changing climatic conditions, but experimental evidence is lacking. We examined the effect of large fungus-growing termites and other non-fungus-growing macrodetritivores on decomposition rates empirically with strong spatiotemporal variability in rainfall and temperature. Non-fungus-growing larger macrodetritivores (earthworms, woodlice, millipedes) promoted decomposition rates relative to microbes and small soil fauna (+34%) but both groups reduced their activities with decreasing rainfall. However, fungus-growing termites increased decomposition rates strongest (+123%) under the most water-limited conditions, making overall decomposition rates mostly independent from rainfall. We conclude that fungus-growing termites are of special importance in decoupling decomposition rates from spatiotemporal variability in rainfall due to the buffered environment they create within their extended phenotype (mounds), that allows decomposition to continue when abiotic conditions outside are less favorable. This points at a wider class of possibly important ecological processes, where soil-plant-animal interactions decouple ecosystem processes from large-scale climatic gradients. This may strongly alter predictions from current climate change models. © 2016 by the Ecological Society of America.

Last glacial to Holocene productivity and oxygen changes based on benthic foraminiferal assemblages from the western Alboran Sea

NASA Astrophysics Data System (ADS)

Pérez-Asensio, José N.; Cacho, Isabel; Frigola, Jaime; Pena, Leopoldo D.; Asioli, Alessandra; Kuhlmann, Jannis; Huhn, Katrin

2016-04-01

Late glacial to Holocene productivity and oxygen changes in the Alboran Sea were investigated analyzing benthic foraminiferal assemblages from the marine sediment core HER-GC-UB06. This 255 cm-long core was recovered at 946 m water depth in the Alboran Sea (western Mediterranean Sea) and includes homogeneous greyish clays from the last 23 ka. Nowadays, the core site is bathed by the Western Mediterranean Deep Water (WMDW) and near the overlying Levantine Intermediate Water (LIW). Benthic foraminifera from the size fraction >63 μm were identified at species level and counted until reaching at least 300 individuals. Q-mode principal component analyses (PCA) was performed to establish benthic foraminiferal assemblages. In addition, benthic foraminifera were classified according to their microhabitat preferences. Diversity was assessed with several diversity indices. Four benthic foraminiferal assemblages have been identified along the core. The distribution of these assemblages records changes in productivity and oxygen conditions during the last 23 ka. The last glacial and deglaciation interval, 23-12.5 ka, shows low diversity and is characterized by the Nonionella iridea assemblage, which includes Cassidulina laevigata, Bolivina dilatata, Nonionoides turgida and Cibicides pachyderma as secondary taxa. This assemblage can be interpreted as a moderately oxygenated mesotrophic environment with episodic pulses of fresh organic matter. Although general mesotrophic conditions prevail, the Last Glacial Maximum shows a more oligotrophic and better oxygenated setting as suggested by higher abundance of epifaunal-shallow infaunal taxa. In contrast, along the Bølling-Allerød eutrophic conditions with higher productivity and lower oxygenation are recorded by a deep infaunal taxa maximum. During the Younger Dryas (YD) and the earliest Holocene (12.5-10.5 ka), the Bolivina dilatata assemblage dominates coinciding with a lower diversity, especially during the YD. This species and the additional taxa of the assemblage (Bolivina spathulata, Bolivina subspinescens, Bulimina marginata, Bolivina variabilis and Uvigerina peregrina) also thrive in mesotrophic environments with fresh organic matter supply and moderate oxygen content. The lower part of the early Holocene (10.5-7.3 ka) is dominated by the Cassidulina obtusa assemblage including Bolivina subspinescens, Bolivina variabilis, Bulimina marginata, Gyroidina altiformis, Nonionella iridea and Quinqueloculina sp. as associated taxa. A highly diverse mesotrophic setting with slightly higher oxygenation can be inferred for this assemblage. This is supported by the higher abundance of epifaunal-shallow infaunal taxa and the presence of G. altiformis and Quinqueloculina sp. Finally, the highly diverse Alabaminella weddellensis assemblage occurs along the upper part of the core (7.3-0 ka) encompassing the upper early Holocene and late Holocene. Additional species of this assemblages are Uvigerina mediterranea, Melonis barleeanus, Cassidulina laevigata, Cassidulina obtusa and Uvigerina peregrina. This assemblage suggests mesotrophic conditions with a more continuous organic matter supply as pointed out by the occurrence of U. mediterranea and the intermediate infaunal M. barleeanus that can feed from more degraded organic matter. The onset of this assemblage around 7.3 ka might be related to the establishment of the semi-permanent productive 'Malaga cell" dated at 7.7 ka.

An Ochered Fossil Marine Shell From the Mousterian of Fumane Cave, Italy

PubMed Central

Peresani, Marco; Vanhaeren, Marian; Quaggiotto, Ermanno; Queffelec, Alain; d’Errico, Francesco

2013-01-01

A scanty but varied ensemble of finds challenges the idea that Neandertal material culture was essentially static and did not include symbolic items. In this study we report on a fragmentary Miocene-Pliocene fossil marine shell, Aspa marginata , discovered in a Discoid Mousterian layer of the Fumane Cave, northern Italy, dated to at least 47.6-45.0 Cal ky BP. The shell was collected by Neandertals at a fossil exposure probably located more than 100 kms from the site. Microscopic analysis of the shell surface identifies clusters of striations on the inner lip. A dark red substance, trapped inside micropits produced by bioeroders, is interpreted as pigment that was homogeneously smeared on the outer shell surface. Dispersive X-ray and Raman analysis identify the pigment as pure hematite. Of the four hypotheses we considered to explain the presence of this object at the site, two (tool, pigment container) are discarded because in contradiction with observations. Although the other two (“manuport”, personal ornament) are both possible, we favor the hypothesis that the object was modified and suspended by a ‘thread’ for visual display as a pendant. Together with contextual and chronometric data, our results support the hypothesis that deliberate transport and coloring of an exotic object, and perhaps its use as pendant, was a component of Neandertal symbolic culture, well before the earliest appearance of the anatomically modern humans in Europe. PMID:23874677

Kinetic Landscape of a Peptide Bond-Forming Prolyl Oligopeptidase

PubMed Central

2017-01-01

Prolyl oligopeptidase B from Galerina marginata (GmPOPB) has recently been discovered as a peptidase capable of breaking and forming peptide bonds to yield a cyclic peptide. Despite the relevance of prolyl oligopeptidases in human biology and disease, a kinetic analysis pinpointing rate-limiting steps for a member of this enzyme family is not available. Macrocyclase enzymes are currently exploited to produce cyclic peptides with potential therapeutic applications. Cyclic peptides are promising druglike molecules because of their stability and conformational rigidity. Here we describe an in-depth kinetic characterization of a prolyl oligopeptidase acting as a macrocyclase enzyme. By combining steady-state and pre-steady-state kinetics, we propose a kinetic sequence in which a step after macrocyclization limits steady-state turnover. Additionally, product release is ordered, where the cyclic peptide departs first followed by the peptide tail. Dissociation of the peptide tail is slow and significantly contributes to the turnover rate. Furthermore, trapping of the enzyme by the peptide tail becomes significant beyond initial rate conditions. The presence of a burst of product formation and a large viscosity effect further support the rate-limiting nature of a physical step occurring after macrocyclization. This is the first detailed description of the kinetic sequence of a macrocyclase enzyme from this class. GmPOPB is among the fastest macrocyclases described to date, and this work is a necessary step toward designing broad-specificity efficient macrocyclases. PMID:28332820

Molecular approach to describing a seed-based food web: the post-dispersal granivore community of an invasive plant

PubMed Central

Lundgren, Jonathan G; Saska, Pavel; Honěk, Alois

2013-01-01

Communities of post-dispersal granivores can shape the density and dispersion of exotic plants and invasive weeds, yet plant ecologists have a limited perception of the relative trophic linkages between a seed species and members of its granivore community. Dandelion seeds marked with Rabbit IgG were disseminated into replicated plots in the recipient habitat (South Dakota) and the native range (Czech Republic). Arthropods were collected in pitfall traps, and their guts were searched for the protein marker using enzyme-linked immunosorbent assay (ELISA). Seed dishes were placed in each plot, and dandelion seed removal rates were measured. The entire experiment was repeated five times over the dandelion flowering period. Gut analysis revealed that approximately 22% of specimens tested positive for the seed marker. A more diverse granivore community had trophic linkages to seeds than has been previously realized under field conditions. This community included taxa such as isopods, millipedes, weevils, rove beetles, and caterpillars, in addition to the traditionally recognized ants, crickets, and carabid beetles. Rarefaction and Chao analysis estimated approximately 16 and 27 species in the granivore communities of the Czech Republic and South Dakota, respectively. Synthesis: Generalist granivore communities are diverse and polyphagous, and are clearly important as a form of biotic resistance to invasive and weedy plants. These granivore communities can be managed to limit population growth of these pests. PMID:23789074

The millipede family Paradoxosomatidae in the Philippines, with a description of Eustrongylosomapenevi sp.n., and notes on Anoplodesmusanthracinus Pocock, 1895, recorded in Malaysia and Sri Lanka for the first time (Diplopoda, Polydesmida).

PubMed

Golovatch, Sergei; Stoev, Pavel

2013-01-01

The Philippine fauna of the family Paradoxosomatidae is reviewed and shown to comprise only 12 certain species (+ one dubious), definitely only a fraction of the real diversity to be expected from such a large tropical archipelago. Two new combinations are proposed: Euphyodesmusphilippina (Nguyen Duc & Sierwald, 2010), comb. n. ex Desmoxytes Chamberlin, 1923, and Luzonomorphapolilloensis (San Juan & Lit, 2010), comb. n. ex Prionopeltis Pocock, 1895. The first representative of the large, basically Papuan genus Eustrongylosoma Silvestri, 1896 is described from Luzon, Philippines: Eustrongylosomapenevi sp. n. It differs from the other congeners in certain details of gonopod structure, as well as by the particularly long legs. Based on a restudy of the types of Strongylosomaluzoniense Peters, 1864, from Luzon, the species is shown to be a new senior subjective synonym of Helicorthomorphaorthogona (Silvestri, 1898), syn. n. This formally results also in Helicorthomorphaluzoniensis (Peters, 1864), comb. n. Anoplodesmusanthracinus Pocock, 1895 is illustrated and briefly redescribed, based on material from State Pulau Penang, Malaysia, which represents the first formal record of the species in that country. This species is also new to the fauna of Sri Lanka. A review of the Anoplodesmus species reported from Sri Lanka, nearly all of them dubious, is presented.

Cytophotometric and biochemical analyses of DNA in pentaploid and diploid Agave species.

PubMed

Cavallini, A; Natali, L; Cionini, G; Castorena-Sanchez, I

1996-04-01

Nuclear DNA content, chromatin structure, and DNA composition were investigated in four Agave species: two diploid, Agave tequilana Weber and Agave angustifolia Haworth var. marginata Hort., and two pentaploid, Agave fourcroydes Lemaire and Agave sisalana Perrine. It was determined that the genome size of pentaploid species is nearly 2.5 times that of diploid ones. Cytophotometric analyses of chromatin structure were performed following Feulgen or DAPI staining to determine optical density profiles of interphase nuclei. Pentaploid species showed higher frequencies of condensed chromatin (heterochromatin) than diploid species. On the other hand, a lower frequency of A-T rich (DAPI stained) heterochromatin was found in pentaploid species than in diploid ones, indicating that heterochromatin in pentaploid species is made up of sequences with base compositions different from those of diploid species. Since thermal denaturation profiles of extracted DNA showed minor variations in the base composition of the genomes of the four species, it is supposed that, in pentaploid species, the large heterochromatin content is not due to an overrepresentation of G-C repetitive sequences but rather to the condensation of nonrepetitive sequences, such as, for example, redundant gene copies switched off in the polyploid complement. It is suggested that speciation in the genus Agave occurs through point mutations and minor DNA rearrangements, as is also indicated by the relative stability of the karyotype of this genus. Key words : Agave, DNA cytophotometry, DNA melting profiles, chromatin structure, genome size.

Soil microbial community successional patterns during forest ecosystem restoration.

PubMed

Banning, Natasha C; Gleeson, Deirdre B; Grigg, Andrew H; Grant, Carl D; Andersen, Gary L; Brodie, Eoin L; Murphy, D V

2011-09-01

Soil microbial community characterization is increasingly being used to determine the responses of soils to stress and disturbances and to assess ecosystem sustainability. However, there is little experimental evidence to indicate that predictable patterns in microbial community structure or composition occur during secondary succession or ecosystem restoration. This study utilized a chronosequence of developing jarrah (Eucalyptus marginata) forest ecosystems, rehabilitated after bauxite mining (up to 18 years old), to examine changes in soil bacterial and fungal community structures (by automated ribosomal intergenic spacer analysis [ARISA]) and changes in specific soil bacterial phyla by 16S rRNA gene microarray analysis. This study demonstrated that mining in these ecosystems significantly altered soil bacterial and fungal community structures. The hypothesis that the soil microbial community structures would become more similar to those of the surrounding nonmined forest with rehabilitation age was broadly supported by shifts in the bacterial but not the fungal community. Microarray analysis enabled the identification of clear successional trends in the bacterial community at the phylum level and supported the finding of an increase in similarity to nonmined forest soil with rehabilitation age. Changes in soil microbial community structure were significantly related to the size of the microbial biomass as well as numerous edaphic variables (including pH and C, N, and P nutrient concentrations). These findings suggest that soil bacterial community dynamics follow a pattern in developing ecosystems that may be predictable and can be conceptualized as providing an integrated assessment of numerous edaphic variables.

Soil Microbial Community Successional Patterns during Forest Ecosystem Restoration ▿†

PubMed Central

Banning, Natasha C.; Gleeson, Deirdre B.; Grigg, Andrew H.; Grant, Carl D.; Andersen, Gary L.; Brodie, Eoin L.; Murphy, D. V.

2011-01-01

Soil microbial community characterization is increasingly being used to determine the responses of soils to stress and disturbances and to assess ecosystem sustainability. However, there is little experimental evidence to indicate that predictable patterns in microbial community structure or composition occur during secondary succession or ecosystem restoration. This study utilized a chronosequence of developing jarrah (Eucalyptus marginata) forest ecosystems, rehabilitated after bauxite mining (up to 18 years old), to examine changes in soil bacterial and fungal community structures (by automated ribosomal intergenic spacer analysis [ARISA]) and changes in specific soil bacterial phyla by 16S rRNA gene microarray analysis. This study demonstrated that mining in these ecosystems significantly altered soil bacterial and fungal community structures. The hypothesis that the soil microbial community structures would become more similar to those of the surrounding nonmined forest with rehabilitation age was broadly supported by shifts in the bacterial but not the fungal community. Microarray analysis enabled the identification of clear successional trends in the bacterial community at the phylum level and supported the finding of an increase in similarity to nonmined forest soil with rehabilitation age. Changes in soil microbial community structure were significantly related to the size of the microbial biomass as well as numerous edaphic variables (including pH and C, N, and P nutrient concentrations). These findings suggest that soil bacterial community dynamics follow a pattern in developing ecosystems that may be predictable and can be conceptualized as providing an integrated assessment of numerous edaphic variables. PMID:21724890

Behavioral responses of freshwater mussels to experimental dewatering

USGS Publications Warehouse

Galbraith, Heather S.; Blakeslee, Carrie J.; Lellis, William A.

2015-01-01

Understanding the effects of flow alteration on freshwater ecosystems is critical for predicting species responses and restoring appropriate flow regimes. We experimentally evaluated the effects of 3 dewatering rates on behavior of 6 freshwater mussel species in the context of water-removal rates observed in 21 Atlantic Coast rivers. Horizontal movement differed significantly among species and dewatering rates, but a significant species × dewatering interaction suggested that these factors influence movement in complex ways. Species differences in movement were evident only in controls and under slow dewatering rates, but these differences disappeared at moderate and fast dewatering rates. Burrowing behavior did not differ with respect to species identity or dewatering rate. The proportion of individuals that became stranded did not differ among species, but most individuals became stranded under low and moderate dewatering, and all individuals became stranded under fast dewatering. Mortality after stranding differed strongly among species along a gradient from 25% inPyganodon cataracta to 92% in Alasmidonta marginata. Together, these results suggest that species behavior may differ under gradual dewatering, but all species in our study are poorly adapted for rapid dewatering. Most of the 21 rivers we assessed experienced dewatering events comparable to our moderate rate, and several experienced events comparable to our fast rate. Dewatering events that exceed the movement or survival capability of most mussel species can be expected to result in assemblage-wide impacts. Consequently, the rate of water level change may be important in refining target flow conditions for restoration.

The Antibacterial Activity of Honey Derived from Australian Flora

PubMed Central

Irish, Julie; Blair, Shona; Carter, Dee A.

2011-01-01

Chronic wound infections and antibiotic resistance are driving interest in antimicrobial treatments that have generally been considered complementary, including antimicrobially active honey. Australia has unique native flora and produces honey with a wide range of different physicochemical properties. In this study we surveyed 477 honey samples, derived from native and exotic plants from various regions of Australia, for their antibacterial activity using an established screening protocol. A level of activity considered potentially therapeutically useful was found in 274 (57%) of the honey samples, with exceptional activity seen in samples derived from marri (Corymbia calophylla), jarrah (Eucalyptus marginata) and jellybush (Leptospermum polygalifolium). In most cases the antibacterial activity was attributable to hydrogen peroxide produced by the bee-derived enzyme glucose oxidase. Non-hydrogen peroxide activity was detected in 80 (16.8%) samples, and was most consistently seen in honey produced from Leptospermum spp. Testing over time found the hydrogen peroxide-dependent activity in honey decreased, in some cases by 100%, and this activity was more stable at 4°C than at 25°C. In contrast, the non-hydrogen peroxide activity of Leptospermum honey samples increased, and this was greatest in samples stored at 25°C. The stability of non-peroxide activity from other honeys was more variable, suggesting this activity may have a different cause. We conclude that many Australian honeys have clinical potential, and that further studies into the composition and stability of their active constituents are warranted. PMID:21464891

Effects of weed cover composition on insect pest and natural enemy abundance in a field of Dracaena marginata (Asparagales: Asparagaceae) in Costa Rica.

PubMed

Sadof, Clifford S; Linkimer, Mildred; Hidalgo, Eduardo; Casanoves, Fernando; Gibson, Kevin; Benjamin, Tamara J

2014-04-01

Weeds and their influence on pest and natural enemy populations were studied on a commercial ornamental farm during 2009 in the Atlantic Zone of Costa Rica. A baseline survey of the entire production plot was conducted in February, along a 5 by 5 m grid to characterize and map initial weed communities of plants, cicadellids, katydids, and armored scales. In total, 50 plant species from 21 families were found. Seven weed treatments were established to determine how weed manipulations would affect communities of our targeted pests and natural enemies. These treatments were selected based on reported effects of specific weed cover on herbivorous insects and natural enemies, or by their use by growers as a cover crop. Treatments ranged from weed-free to being completely covered with endemic species of weeds. Although some weed treatments changed pest abundances, responses differed among arthropod pests, with the strongest effects observed for Caldwelliola and Empoasca leafhoppers. Removal of all weeds increased the abundance of Empoasca, whereas leaving mostly cyperacaeous weeds increased the abundance of Caldwelliola. Weed manipulations had no effect on the abundance of katydid and scale populations. No weed treatment reduced the abundance of all three of the target pests. Differential responses of the two leafhopper species to the same weed treatments support hypotheses, suggesting that noncrop plants can alter the abundance of pests through their effects on arthropod host finding and acceptance, as well as their impacts on natural enemies.

Interrogating an insect society

PubMed Central

Gadagkar, Raghavendra

2009-01-01

Insect societies such as those of ants, bees, and wasps consist of 1 or a small number of fertile queens and a large number of sterile or nearly sterile workers. While the queens engage in laying eggs, workers perform all other tasks such as nest building, acquisition and processing of food, and brood care. How do such societies function in a coordinated and efficient manner? What are the rules that individuals follow? How are these rules made and enforced? These questions are of obvious interest to us as fellow social animals but how do we interrogate an insect society and seek answers to these questions? In this article I will describe my research that was designed to seek answers from an insect society to a series of questions of obvious interest to us. I have chosen the Indian paper wasp Ropalidia marginata for this purpose, a species that is abundantly distributed in peninsular India and serves as an excellent model system. An important feature of this species is that queens and workers are morphologically identical and physiologically nearly so. How then does an individual become a queen? How does the queen suppress worker reproduction? How does the queen regulate the nonreproductive activities of the workers? What is the function of aggression shown by different individuals? How and when is the queen's heir decided? I will show how such questions can indeed be investigated and will emphasize the need for a whole range of different techniques of observation and experimentation. PMID:19487678

[Presence, abundance and reproductive strategies of ferns in disturbed areas of Sierra Nevada, México].

PubMed

Rodríguez Romero, Ma Lucía; Zavala Hurtado, José Alejandro; Pacheco, Leticia

2011-03-01

Diverse reproductive strategies shown by ferns and lycophytes allow them to colonize a variety of habitats, particularly after the incidence of natural or anthropogenic disturbances. This study assessed the presence, abundance and reproductive strategies of ferns growing in soils of temperate forests with different levels of disturbance at the Sierra Nevada mountain range in the State of Mexico. Vegetation, soil and environmental variables were recorded in 200 m2 permanent plots located in four forest stands. One-Way ANOVA and Canonical Correspondence Analysis resulted in the recognition of three landscape types defined by the degree of environmental alteration: low, moderate and severe. Also, from five soil samples collected in each stand, germination of ferns and lycophytes was induced. A positive relationship was found between the alteration degree and Cheilanthes abundance. Under a low landscape alteration regime, species richness is restricted to Cheilanthes bonariensis, C. marginata and Pellaea ternifolia subsp. ternifolia. The soil is a reservoir of spores of Cheilanthes and Pellaea ternifolia subsp. ternifolia because their spores can remain viable for different time intervals. Apogamy is the usual reproductive strategy of Cheilanthes species in disturbed ecosystems, although these species also show sexual reproduction in natural ecosystems with adequate water availability. Apogamy may be related to a shorter generation time in comparison with a low disturbed ecosystem. On the other hand, Pellaea ternifolia subsp. ternifolia only has sexual reproduction. Apogamy might be related to a faster generation in comparison with a low disturbed ecosystem.

MRI evidence of endolymphatic impermeability to the gadolinium molecule in the in vivo mouse inner ear at 9.4 tesla.

PubMed

Counter, S Allen; Nikkhou, Sahar; Brené, Stefan; Damberg, Peter; Sierakowiak, Adam; Klason, Tomas; Berglin, Cecilia Engmér; Laurell, Göran

2013-01-01

Previous in vivo experimental magnetic resonance imaging (MRI) investigations of the mammalian inner ear at 4.7 Tesla have indicated that intravenously injected gadolinium (Gd) penetrates the perilymphatic labyrinth, but not the endolymphatic membranous labyrinth. In the present study, high field MRI at 9.4T was used to visualize the in vivo mouse vestibulo-cochlea system, and to determine whether the endolymphatic system is permeable to a Gd complex. A 9.4 T Varian magnet equipped with a 12 cm inner diameter gradient system with maximum gradient strength of 600 mT/m, a millipede coil (Varian design) and a Gd contrast agent were used for image acquisition in the normal C57 BL-6 mouse. High-resolution 2D and 3D images of the mouse cochlea were acquired within 80 minutes following intravenous injection of Gd. Gd initially permeated the perilymphatic scala tympani and scala vestibuli, and permitted visualization of both cochlear turns from base to apex. The superior, inferior and lateral semicircular canals were subsequently visualized in 3 planes. The membranous endolymphatic labyrinth was impermeable to intravenously injected Gd, and thus showed no apparent uptake of Gd at 9.4T. The 9.4T field strength MRI permitted acquisition of high resolution images of anatomical and physiological features of the normal, wild type mouse perilymphatic inner ear in vivo, and provided further evidence that the endolymphatic system is impermeable to intravenously injected Gd.

Genomic Characterization of the Genus Nairovirus (Family Bunyaviridae).

PubMed

Kuhn, Jens H; Wiley, Michael R; Rodriguez, Sergio E; Bào, Yīmíng; Prieto, Karla; Travassos da Rosa, Amelia P A; Guzman, Hilda; Savji, Nazir; Ladner, Jason T; Tesh, Robert B; Wada, Jiro; Jahrling, Peter B; Bente, Dennis A; Palacios, Gustavo

2016-06-10

Nairovirus, one of five bunyaviral genera, includes seven species. Genomic sequence information is limited for members of the Dera Ghazi Khan, Hughes, Qalyub, Sakhalin, and Thiafora nairovirus species. We used next-generation sequencing and historical virus-culture samples to determine 14 complete and nine coding-complete nairoviral genome sequences to further characterize these species. Previously unsequenced viruses include Abu Mina, Clo Mor, Great Saltee, Hughes, Raza, Sakhalin, Soldado, and Tillamook viruses. In addition, we present genomic sequence information on additional isolates of previously sequenced Avalon, Dugbe, Sapphire II, and Zirqa viruses. Finally, we identify Tunis virus, previously thought to be a phlebovirus, as an isolate of Abu Hammad virus. Phylogenetic analyses indicate the need for reassignment of Sapphire II virus to Dera Ghazi Khan nairovirus and reassignment of Hazara, Tofla, and Nairobi sheep disease viruses to novel species. We also propose new species for the Kasokero group (Kasokero, Leopards Hill, Yogue viruses), the Ketarah group (Gossas, Issyk-kul, Keterah/soft tick viruses) and the Burana group (Wēnzhōu tick virus, Huángpí tick virus 1, Tǎchéng tick virus 1). Our analyses emphasize the sister relationship of nairoviruses and arenaviruses, and indicate that several nairo-like viruses (Shāyáng spider virus 1, Xīnzhōu spider virus, Sānxiá water strider virus 1, South Bay virus, Wǔhàn millipede virus 2) require establishment of novel genera in a larger nairovirus-arenavirus supergroup.

Forest cockchafer larvae as methane production hotspots in soils and their importance for net soil methane fluxes

NASA Astrophysics Data System (ADS)

Görres, Carolyn-Monika; Kammann, Claudia; Murphy, Paul; Müller, Christoph

2016-04-01

Certain groups of soil invertebrates, namely scarab beetles and millipedes, are capable of emitting considerable amounts of methane due to methanogens inhabiting their gut system. It was already pointed out in the early 1990's, that these groups of invertebrates may represent a globally important source of methane. However, apart from termites, the importance of invertebrates for the soil methane budget is still unknown. Here, we present preliminary results of a laboratory soil incubation experiment elucidating the influence of forest cockchafer larvae (Melolontha hippocastani FABRICIUS) on soil methane cycling. In January/February 2016, two soils from two different management systems - one from a pine forest (extensive use) and one from a vegetable field (intensive use) - were incubated for 56 days either with or without beetle larvae. Net soil methane fluxes and larvae methane emissions together with their stable carbon isotope signatures were quantified at regular intervals to estimate gross methane production and gross methane oxidation in the soils. The results of this experiment will contribute to testing the hypothesis of whether methane production hotspots can significantly enhance the methane oxidation capacity of soils. Forest cockchafer larvae are only found in well-aerated sandy soils where one would usually not suspect relevant gross methane production. Thus, besides quantifying their contribution to net soil methane fluxes, they are also ideal organisms to study the effect of methane production hotspots on overall soil methane cycling. Funding support: Reintegration grant of the German Academic Exchange Service (DAAD) (#57185798).

Three New Species and Nine New Records in the Genus Arthonia from South Korea

PubMed Central

Lee, Beeyoung Gun

2016-01-01

Arthonia coreana, Arthonia superpallens, and Arthonia zelkovae are new species from South Korea. All new species are in the Euarthonia tribe, based on the key characteristics of colorless hypothecium and multi-cellular spores. A. coreana has a dull brownish hypophloedal thallus without bleaching and rounded or curved big apothecia in comparison with those of Arthonia punctiformis. A. coreana consistently exhibits 4-septate ascospores, which is a distinctive characteristic that distinguishes it from other Arthonia species. A. superpallens has a white-greenish thallus, pale yellowish apothecia, and a trentepohlioid alga. However, A. superpallens has no distinct prothallus, adnate, and convex apothecia, no pycnidia, and is UV-, in contrast with related species in the Arthonia antillarum group. A. zelkovae has a white, epiphloedal thallus, brownish-black epruinose apothecia covered with a whitish bark layer, and smaller ascospores in comparison with those of A. punctiformis. A. zelkovae consists of a chlorococcoid alga, which differs from related Arthonia species such as A. punctiformis, Arthonia pinastri, and Arthonia glaucella. Although A. zelkovae is similar to Arthonia dispersa in its white-colored thallus, blackish apothecia, and the presence of a chlorococcoid photobiont, A. zelkovae differs from the latter in having larger-sized 3-septate ascospores. Arthonia cinnabarina f. marginata, A. glaucella, Arthonia ilicinella, Arthonia lapidicola, Arthonia leioplacella, Arthonia pertabescens, A. pinastri, Arthonia spadicea, and Arthonia stellaris are newly described in Korea. The diagnostic characteristics of these species are discussed and presented. An artificial key is provided to facilitate identification of Arthonia species from Northeast Asia. PMID:28154479

Anatomy of nasal complex in the southern right whale, Eubalaena australis (Cetacea, Mysticeti).

PubMed

Buono, Mónica R; Fernández, Marta S; Fordyce, R Ewan; Reidenberg, Joy S

2015-01-01

The nasal region of the skull has undergone dramatic changes during the course of cetacean evolution. In particular, mysticetes (baleen whales) conserve the nasal mammalian pattern associated with the secondary function of olfaction, and lack the sound-producing specializations present in odontocetes (toothed whales, dolphins and porpoises). To improve our understanding of the morphology of the nasal region of mysticetes, we investigate the nasal anatomy, osteology and myology of the southern right whale, Eubalaena australis, and make comparisons with other mysticetes. In E. australis external deflection surfaces around the blowholes appear to divert water off the head, and differ in appearance from those observed in balaenopterids, eschrichtiids and cetotherids. In E. australis the blowholes are placed above hypertrophied nasal soft tissues formed by fat and nasal muscles, a pattern also observed in balaenopterids (rorqual mysticetes) and a cetotherid (pygmy right whale, Caperea marginata). Blowhole movements are due to the action of five nasofacial muscles: dilator naris superficialis, dilator naris profundus, depressor alae nasi, constrictor naris, and retractor alae nasi. The dilator naris profundus found in E. australis has not been previously reported in balaenopterids. The other nasofacial muscles have a similar arrangement in balaenopterids, with minor differences. A novel structure, not reported previously in any mysticete, is the presence of a vascular tissue (rete mirabile) covering the lower nasal passage. This vascular tissue could play a role in warming inspired air, or may engorge to accommodate loss of respiratory space volume due to gas compression from increased pressure during diving. © 2014 Anatomical Society.

Anatomy of nasal complex in the southern right whale, Eubalaena australis (Cetacea, Mysticeti)

PubMed Central

Buono, Mónica R; Fernández, Marta S; Fordyce, R Ewan; Reidenberg, Joy S

2015-01-01

The nasal region of the skull has undergone dramatic changes during the course of cetacean evolution. In particular, mysticetes (baleen whales) conserve the nasal mammalian pattern associated with the secondary function of olfaction, and lack the sound-producing specializations present in odontocetes (toothed whales, dolphins and porpoises). To improve our understanding of the morphology of the nasal region of mysticetes, we investigate the nasal anatomy, osteology and myology of the southern right whale, Eubalaena australis, and make comparisons with other mysticetes. In E. australis external deflection surfaces around the blowholes appear to divert water off the head, and differ in appearance from those observed in balaenopterids, eschrichtiids and cetotherids. In E. australis the blowholes are placed above hypertrophied nasal soft tissues formed by fat and nasal muscles, a pattern also observed in balaenopterids (rorqual mysticetes) and a cetotherid (pygmy right whale, Caperea marginata). Blowhole movements are due to the action of five nasofacial muscles: dilator naris superficialis, dilator naris profundus, depressor alae nasi, constrictor naris, and retractor alae nasi. The dilator naris profundus found in E. australis has not been previously reported in balaenopterids. The other nasofacial muscles have a similar arrangement in balaenopterids, with minor differences. A novel structure, not reported previously in any mysticete, is the presence of a vascular tissue (rete mirabile) covering the lower nasal passage. This vascular tissue could play a role in warming inspired air, or may engorge to accommodate loss of respiratory space volume due to gas compression from increased pressure during diving. PMID:25440939

DNA characterization and karyotypic evolution in the bee genus Melipona (Hymenoptera, Meliponini).

PubMed

Rocha, Marla Piumbini; Pompolo, Silvia Das Graças; Dergam, Jorge Abdala; Fernandes, Anderson; Campos, Lucio Antonio De Oliveira

2002-01-01

We analyzed patterns of heterochromatic bands in the Neotropical stingless bee genus Melipona (Hymenoptera, Meliponini). Group I species (Melipona bicolor bicolor, Melipona quadrifasciata, Melipona asilvae, Melipona marginata, Melipona subnitida) were characterized by low heterochromatic content. Group II species (Melipona capixaba, Melipona compressipes, Melipona crinita, Melipona seminigra fuscopilosa e Melipona scutellaris) had high heterochromatic content. All species had 2n = 18 and n = 9. In species of Group I heterochromatin was pericentromeric and located on the short arm of acrocentric chromosomes, while in Group II species heterochromatin was distributed along most of the chromosome length. The most effective sequential staining was quinacrine mustard (QM)/distamycin (DA)/chromomycin A3(CMA3)/4-6-diamidino-2-phenylindole (DAPI). Heterochromatic and euchromatic bands varied extensively within Group I. In Group II species euchromatin was restricted to the chromosome tips and it was uniformly GC+. Patterns of restriction enzymes (EcoRI, DraI, HindIII) showed that heterochromatin was heterogeneous. In all species the first pair of homologues was of unequal size and showed heteromorphism of a GC+ pericentromeric heterochromatin. In M. asilvae (Group I) this pair bore NOR and in M. compressipes (Group II) it hybridized with a rDNA FISH probe. As for Group I species the second pair was AT+ in M. subnitida and neutral for AT and GC in the remaining species of this group. Outgroup comparison indicates that high levels of heterochromatin represent a derived condition within Melipona. The pattern of karyotypic evolution sets Melipona in an isolated position within the Meliponini.

Photosynthesis, photoprotection, and growth of shade-tolerant tropical tree seedlings under full sunlight.

PubMed

Krause, G Heinrich; Winter, Klaus; Matsubara, Shizue; Krause, Barbara; Jahns, Peter; Virgo, Aurelio; Aranda, Jorge; García, Milton

2012-09-01

High solar radiation in the tropics is known to cause transient reduction in photosystem II (PSII) efficiency and CO(2) assimilation in sun-exposed leaves, but little is known how these responses affect the actual growth performance of tropical plants. The present study addresses this question. Seedlings of five woody neotropical forest species were cultivated under full sunlight and shaded conditions. In full sunlight, strong photoinhibition of PSII at midday was documented for the late-successional tree species Ormosia macrocalyx and Tetragastris panamensis and the understory/forest gap species, Piper reticulatum. In leaves of O. macrocalyx, PSII inhibition was accompanied by substantial midday depression of net CO(2) assimilation. Leaves of all species had increased pools of violaxanthin-cycle pigments. Other features of photoacclimation, such as increased Chl a/b ratio and contents of lutein, β-carotene and tocopherol varied. High light caused strong increase of tocopherol in leaves of T. panamensis and another late-successional species, Virola surinamensis. O. macrocalyx had low contents of tocopherol and UV-absorbing substances. Under full sunlight, biomass accumulation was not reduced in seedlings of T. panamensis, P. reticulatum, and V. surinamensis, but O. macrocalyx exhibited substantial growth inhibition. In the highly shade-tolerant understory species Psychotria marginata, full sunlight caused strongly reduced growth of most individuals. However, some plants showed relatively high growth rates under full sun approaching those of seedlings at 40 % ambient irradiance. It is concluded that shade-tolerant tropical tree seedlings can achieve efficient photoacclimation and high growth rates in full sunlight.

Quantitative differences detected in the histology of galls induced by the same aphid species in different varieties of the same host.

PubMed

Martinez, J-J I; Moreno-González, V; Jonas-Levi, A; Álvarez, R

2018-05-01

Plant galls are abnormal growths caused by an inducer that determines their morphology and anatomy. We qualitatively and quantitatively compared the histological anatomy of five aphid species (Paracletus cimiciformis, Forda marginata, Forda formicaria, Baizongia pistaciae and Geoica wertheimae) that induce galls in Pistacia terebinthus shrubs growing in Israel. We also quantitatively compared these galls to those that the aphids create on the same host in Spain. Histological study was conducted following methods described previously by the authors. Quantitative differences among the galls were found in five of 12 common anatomical traits: gall thickness, stomatal number in the epidermis-air, size of vascular bundles, distance of phloem ducts from the lumen and number of intraphloematic schizogenous ducts. Other structures were particular to one or some species: number of cracks in the epidermis-lumen, a sclereid layer, trichomes and microcrystal inclusions. Fisher's tests of combined probabilities showed that the galls induced in Israel were statistically different from those in Spain. In particular, the number of intraphloematic schizogenous ducts was higher in the galls induced in P. terebinthus in Israel. Such differences were also found in other traits related to defence of the gall inhabitant. In conclusion, while the gall shape and size are determined mainly by the cecidogenic insect, it seems that the host plant also plays an important role in determining the number/size of quantitative traits, in this case mainly protective structures. © 2018 German Society for Plant Sciences and The Royal Botanical Society of the Netherlands.

Hatchling turtles survive freezing during winter hibernation.

PubMed Central

Storey, K B; Storey, J M; Brooks, S P; Churchill, T A; Brooks, R J

1988-01-01

Hatchlings of the painted turtle (Chrysemys picta marginata) are unique as the only reptile and highest vertebrate life form known to tolerate the natural freezing of extracellular body fluids during winter hibernation. Turtles survived frequent exposures to temperatures as low as -6 degrees C to -8 degrees C in their shallow terrestrial nests over the 1987-1988 winter. Hatchlings collected in April 1988 had a mean supercooling point of -3.28 +/- 0.24 degrees C and survived 24 hr of freezing at -4 degrees C with 53.4% +/- 1.98% of total body water as ice. Recovery appeared complete after 20 hr of thawing at 3 degrees C. However, freezing at -10.9 degrees C, resulting in 67% ice, was lethal. A survey of possible cryoprotectants revealed a 2- to 3-fold increase in glucose content of liver and blood and a 3-fold increase in blood glycerol in response to freezing. Although quantitatively low, these responses by spring turtles strongly indicate that these may be the winter-active cryoprotectants. The total amino acid pool of blood also increased 2.25-fold in freezing-exposed turtles, and taurine accounted for 52% of the increase. Most organs accumulated high concentrations of lactate during freezing, a response to the ischemic state imposed by extracellular freezing. Changes in glycogen phosphorylase activity and levels of glucose 6-phosphate and fructose 2,6-bisphosphate were also consistent with a dependence on anaerobic glycolysis during freezing. Studies of the molecular mechanisms of natural freeze tolerance in these turtles may identify protective strategies that can be used in mammalian organ cryopreservation technology. PMID:3186730

Speciation in Indo-Pacific swiftlets (Aves: Apodidae): integrating molecular and phenotypic data for a new provisional taxonomy of the Collocalia esculenta complex.

PubMed

Rheindt, Frank E; Christidis, Les; Norman, Janette A; Eaton, James A; Sadanandan, Keren R; Schodde, Richard

2017-04-07

White-bellied swiftlets of the Collocalia esculenta complex constitute a radiation of colony-breeding swifts distributed throughout the tropical Indo-Pacific region. Resolution of their taxonomy is challenging due to their morphological uniformity. To analyze the evolutionary history of this complex, we combine new biometric measurements and results from plumage assessment of museum specimens with novel as well as previously published molecular data. Together, this body of information constitutes the largest systematic dataset for white-bellied swiftlets yet compiled, drawn from 809 individuals belonging to 32 taxa for which new molecular, biometric, and/or plumage data are presented. We propose changing the classification of white-bellied swiftlets, for which two species are currently recognized, to elevate eight regional forms to species level, and we also describe two new subspecies. The ten taxa we recommend recognizing at the species level are: Collocalia linchi (Java to Lombok, Sumatran hills), C. dodgei (montane Borneo), C. natalis (Christmas Island), C. affinis (Greater Sundas, including the Thai-Malay Peninsula and Andaman-Nicobar Islands), C. marginata (Philippines), C. isonota (Philippines), C. sumbawae (west Lesser Sundas), C. neglecta (east Lesser Sundas), C. esculenta (Sulawesi, Moluccas, New Guinea, Bismarck Archipelago, Solomon Islands), and C. uropygialis (Vanuatu, New Caledonia). Future molecular and morphological work is needed to resolve questions of speciation and population affinities in the Philippines, Christmas Island, Wallacea and central Melanesia, and to shed light on historic diversification and patterns of gene flow in the complex.

Phenological cues intrinsic in indigenous knowledge systems for forecasting seasonal climate in the Delta State of Nigeria

NASA Astrophysics Data System (ADS)

Fitchett, Jennifer M.; Ebhuoma, Eromose

2018-06-01

Shifts in the timing of phenological events in plants and animals are cited as one of the most robust bioindicators of climate change. Much effort has thus been placed on the collection of phenological datasets, the quantification of the rates of phenological shifts and the association of these shifts with recorded meteorological data. These outputs are of value both in tracking the severity of climate change and in facilitating more robust management approaches in forestry and agriculture to changing climatic conditions. However, such an approach requires meteorological and phenological records spanning multiple decades. For communities in the Delta State of Nigeria, small-scale farming communities do not have access to meteorological records, and the dissemination of government issued daily to seasonal forecasts has only taken place in recent years. Their ability to survive inter-annual to inter-decadal climatic variability and longer-term climatic change has thus relied on well-entrenched indigenous knowledge systems (IKS). An analysis of the environmental cues that are used to infer the timing and amount of rainfall by farmers from three communities in the Delta State reveals a reliance on phenological events, including the croaking of frogs, the appearance of red millipedes and the emergence of fresh rubber tree and cassava leaves. These represent the first recorded awareness of phenology within the Delta State of Nigeria, and a potentially valuable source of phenological data. However, the reliance of these indicators is of concern given the rapid phenological shifts occurring in response to climate change.

The role of fossil organic matter in the ecosystem development of post-mining sites revealed by isotope analyses

NASA Astrophysics Data System (ADS)

Jandova, Katerina; Hyodo, Fujio; Vindušková, Olga; Moradi, Jabbar; Frouz, Jan

2017-04-01

Sediments rich in kerogen ( 19 Ma old, 14C-free) are present in the overburden at post-mining area in Western Bohemia, near Sokolov city, the Czech Republic. There are two successional chronosequences, an alder reclamation and spontaneous succession, consisting of sites that differ in time since heaping. Both chronosequences accumulate recent organic matter over time, although the process is initially faster at reclamation. We hypothesized that (i) radiocarbon age of soil organic matter would be decreasing with time since spoil heaping; (ii) the detrital food web would show the assimilation of fossil carbon by heterotrophic organisms in the initial stages of succession when fossil organic matter is the predominant source of carbon; (iii) the isotopic track of fossil organic matter in the detrital food web would be more prominent at sites with lower vegetation cover and litter production. Nitrogen isotopic ratios of soils were high at the young sites and the decrease in δ15N was correlated with the increase in content of recent organic carbon. Nitrogen isotopic ratios of soil detritivores equalled to that of tree leaves at reclamation but were higher at successional sites. Possibly, other food sources were used apart from tree leaves litter at the latter. Interestingly, soil animals but not primary producers were 14C depleted in the youngest relative to the oldest sites. The depletion in 14C of detritivores relative to primary producers was likely due to the geophagy behaviour of the millipedes at the young sites where fossil organic matter is the largest carbon pool.

Phenological cues intrinsic in indigenous knowledge systems for forecasting seasonal climate in the Delta State of Nigeria

NASA Astrophysics Data System (ADS)

Fitchett, Jennifer M.; Ebhuoma, Eromose

2017-12-01

Shifts in the timing of phenological events in plants and animals are cited as one of the most robust bioindicators of climate change. Much effort has thus been placed on the collection of phenological datasets, the quantification of the rates of phenological shifts and the association of these shifts with recorded meteorological data. These outputs are of value both in tracking the severity of climate change and in facilitating more robust management approaches in forestry and agriculture to changing climatic conditions. However, such an approach requires meteorological and phenological records spanning multiple decades. For communities in the Delta State of Nigeria, small-scale farming communities do not have access to meteorological records, and the dissemination of government issued daily to seasonal forecasts has only taken place in recent years. Their ability to survive inter-annual to inter-decadal climatic variability and longer-term climatic change has thus relied on well-entrenched indigenous knowledge systems (IKS). An analysis of the environmental cues that are used to infer the timing and amount of rainfall by farmers from three communities in the Delta State reveals a reliance on phenological events, including the croaking of frogs, the appearance of red millipedes and the emergence of fresh rubber tree and cassava leaves. These represent the first recorded awareness of phenology within the Delta State of Nigeria, and a potentially valuable source of phenological data. However, the reliance of these indicators is of concern given the rapid phenological shifts occurring in response to climate change.

MRI Evidence of Endolymphatic Impermeability to the Gadolinium Molecule in the In Vivo Mouse Inner Ear at 9.4 Tesla

PubMed Central

Counter, S Allen; Nikkhou, Sahar; Brené, Stefan; Damberg, Peter; Sierakowiak, Adam; Klason, Tomas; Berglin, Cecilia Engmér; Laurell, Göran

2013-01-01

Objective: Previous in vivo experimental magnetic resonance imaging (MRI) investigations of the mammalian inner ear at 4.7 Tesla have indicated that intravenously injected gadolinium (Gd) penetrates the perilymphatic labyrinth, but not the endolymphatic membranous labyrinth. In the present study, high field MRI at 9.4T was used to visualize the in vivo mouse vestibulo-cochlea system, and to determine whether the endolymphatic system is permeable to a Gd complex. Methods: A 9.4 T Varian magnet equipped with a 12 cm inner diameter gradient system with maximum gradient strength of 600 mT/m, a millipede coil (Varian design) and a Gd contrast agent were used for image acquisition in the normal C57 BL-6 mouse. Results: High-resolution 2D and 3D images of the mouse cochlea were acquired within 80 minutes following intravenous injection of Gd. Gd initially permeated the perilymphatic scala tympani and scala vestibuli, and permitted visualization of both cochlear turns from base to apex. The superior, inferior and lateral semicircular canals were subsequently visualized in 3 planes. The membranous endolymphatic labyrinth was impermeable to intravenously injected Gd, and thus showed no apparent uptake of Gd at 9.4T. Conclusion: The 9.4T field strength MRI permitted acquisition of high resolution images of anatomical and physiological features of the normal, wild type mouse perilymphatic inner ear in vivo, and provided further evidence that the endolymphatic system is impermeable to intravenously injected Gd. PMID:23894262

Phenological cues intrinsic in indigenous knowledge systems for forecasting seasonal climate in the Delta State of Nigeria.

PubMed

Fitchett, Jennifer M; Ebhuoma, Eromose

2018-06-01

Shifts in the timing of phenological events in plants and animals are cited as one of the most robust bioindicators of climate change. Much effort has thus been placed on the collection of phenological datasets, the quantification of the rates of phenological shifts and the association of these shifts with recorded meteorological data. These outputs are of value both in tracking the severity of climate change and in facilitating more robust management approaches in forestry and agriculture to changing climatic conditions. However, such an approach requires meteorological and phenological records spanning multiple decades. For communities in the Delta State of Nigeria, small-scale farming communities do not have access to meteorological records, and the dissemination of government issued daily to seasonal forecasts has only taken place in recent years. Their ability to survive inter-annual to inter-decadal climatic variability and longer-term climatic change has thus relied on well-entrenched indigenous knowledge systems (IKS). An analysis of the environmental cues that are used to infer the timing and amount of rainfall by farmers from three communities in the Delta State reveals a reliance on phenological events, including the croaking of frogs, the appearance of red millipedes and the emergence of fresh rubber tree and cassava leaves. These represent the first recorded awareness of phenology within the Delta State of Nigeria, and a potentially valuable source of phenological data. However, the reliance of these indicators is of concern given the rapid phenological shifts occurring in response to climate change.

Chemical Ecology of Cave-Dwelling Millipedes: Defensive Secretions of the Typhloiulini (Diplopoda, Julida, Julidae).

PubMed

Makarov, Slobodan E; Bodner, Michaela; Reineke, Doris; Vujisić, Ljubodrag V; Todosijević, Marina M; Antić, Dragan Ž; Vagalinski, Boyan; Lučić, Luka R; Mitić, Bojan M; Mitov, Plamen; Anđelković, Boban D; Lucić, Sofija Pavković; Vajs, Vlatka; Tomić, Vladimir T; Raspotnig, Günther

2017-04-01

Cave animals live under highly constant ecological conditions and in permanent darkness, and many evolutionary adaptations of cave-dwellers have been triggered by their specific environment. A similar "cave effect" leading to pronounced chemical interactions under such conditions may be assumed, but the chemoecology of troglobionts is mostly unknown. We investigated the defensive chemistry of a largely cave-dwelling julid group, the controversial tribe "Typhloiulini", and we included some cave-dwelling and some endogean representatives. While chemical defense in juliform diplopods is known to be highly uniform, and mainly based on methyl- and methoxy-substituted benzoquinones, the defensive secretions of typhloiulines contained ethyl-benzoquinones and related compounds. Interestingly, ethyl-benzoquinones were found in some, but not all cave-dwelling typhloiulines, and some non-cave dwellers also contained these compounds. On the other hand, ethyl-benzoquinones were not detected in troglobiont nor in endogean typhloiuline outgroups. In order to explain the taxonomic pattern of ethyl-benzoquinone occurrence, and to unravel whether a cave-effect triggered ethyl-benzoquinone evolution, we classed the "Typhloiulini" investigated here within a phylogenetic framework of julid taxa, and traced the evolutionary history of ethyl-benzoquinones in typhloiulines in relation to cave-dwelling. The results indicated a cave-independent evolution of ethyl-substituted benzoquinones, indicating the absence of a "cave effect" on the secretions of troglobiont Typhloiulini. Ethyl-benzoquinones probably evolved early in an epi- or endogean ancestor of a clade including several, but not all Typhloiulus (basically comprising a taxonomic entity known as "Typhloiulus sensu stricto") and Serboiulus. Ethyl-benzoquinones are proposed as novel and valuable chemical characters for julid systematics.

Arthromitus (Bacillus cereus) symbionts in the cockroach Blaberus giganteus: dietary influences on bacterial development and population density.

PubMed

Feinberg, L; Jorgensen, J; Haselton, A; Pitt, A; Rudner, R; Margulis, L

1999-01-01

The filamentous spore-forming bacterium Arthromitus, discovered in termites, millipedes, sow bugs and other soil-dwelling arthropods by Leidy (1850), is the intestinal stage of Bacillus cereus. We extend the range of Arthromitus habitats to include the hindgut of Blaberus giganteus, the large tropical American cockroach. The occurrence and morphology of the intestinal form of the bacillus were compared in individual cockroaches (n=24) placed on four different diet regimes: diurnally maintained insects fed (1) dog food, (2) soy protein only, (3)purified cellulose only, and (4) a dog food-fed group maintained in continuous darkness. Food quality exerted strong influence on population densities and developmental stages of the filamentous bacterium and on fecal pellet composition. The most dramatic rise in Arthromitus populations, defined as the spore-forming filament intestinal stage, occurred in adult cockroaches kept in the dark on a dog food diet. Limited intake of cellulose or protein alone reduced both the frequency of Arthromitus filaments and the rate of weight gain of the insects. Spores isolated from termites, sow bugs, cockroaches and moths, grown on various hard surfaces display a branching mobility and resistance to antibiotics characteristic to group I Bacilli whose members include B. cereus, B. circulans, B. alvei and B. macerans. DNA isolated from pure cultures of these bacilli taken from the guts of Blaberus giganteus (cockroach), Junonia coenia (moth), Porcellio scaber (sow bug) and Cryptotermes brevis (termite) and subjected to Southern hybridization with a 23S-5S B. subtilis ribosomal sequence probe verified that they are indistinguishable from laboratory strains of Bacillus cereus.

Potential macro-detritivore range expansion into the subarctic stimulates litter decomposition: a new positive feedback mechanism to climate change?

PubMed

van Geffen, Koert G; Berg, Matty P; Aerts, Rien

2011-12-01

As a result of low decomposition rates, high-latitude ecosystems store large amounts of carbon. Litter decomposition in these ecosystems is constrained by harsh abiotic conditions, but also by the absence of macro-detritivores. We have studied the potential effects of their climate change-driven northward range expansion on the decomposition of two contrasting subarctic litter types. Litter of Alnus incana and Betula pubescens was incubated in microcosms together with monocultures and all possible combinations of three functionally different macro-detritivores (the earthworm Lumbricus rubellus, isopod Oniscus asellus, and millipede Julus scandinavius). Our results show that these macro-detritivores stimulated decomposition, especially of the high-quality A. incana litter and that the macro-detritivores tested differed in their decomposition-stimulating effects, with earthworms having the largest influence. Decomposition processes increased with increasing number of macro-detritivore species, and positive net diveristy effects occurred in several macro-detritivore treatments. However, after correction for macro-detritivore biomass, all interspecific differences in macro-detritivore effects, as well as the positive effects of species number on subarctic litter decomposition disappeared. The net diversity effects also appeared to be driven by variation in biomass, with a possible exception of net diversity effects in mass loss. Based on these results, we conclude that the expected climate change-induced range expansion of macro-detritivores into subarctic regions is likely to result in accelerated decomposition rates. Our results also indicate that the magnitude of macro-detritivore effects on subarctic decomposition will mainly depend on macro-detritivore biomass, rather than on macro-detritivore species number or identity.

Reproductive Seasonality in Nesticus (Araneae: Nesticidae) Cave Spiders.

PubMed

Carver, Linnea M; Perlaky, Patricia; Cressler, Alan; Zigler, Kirk S

2016-01-01

Spiders of the family Nesticidae are members of cave communities around the world with cave-obligate (troglobiotic) species known from North America, Europe, Asia and the Indo-Pacific. A radiation of Nesticus (Araneae: Nesticidae) in the southern Appalachians includes ten troglobiotic species. Many of these species are of conservation interest due to their small ranges, with four species being single-cave endemics. Despite conservation concerns and their important role as predators in cave communities, we know little about reproduction and feeding in this group. We addressed this knowledge gap by examining populations of two species on a monthly basis for one year. We made further observations on several other species and populations, totaling 671 individual spider observations. This more than doubled the reported observations of reproduction and feeding in troglobiotic Nesticus. Female Nesticus carry egg sacs, facilitating the determination of the timing and frequency of reproduction. We found that Nesticus exhibit reproductive seasonality. Females carried egg sacs from May through October, with a peak in frequency in June. These spiders were rarely observed with prey; only 3.3% (22/671) of individuals were observed with prey items. The frequency at which prey items were observed did not vary by season. Common prey items were flies, beetles and millipedes. Troglobiotic species constituted approximately half of all prey items observed. This result represents a greater proportion of troglobiotic prey than has been reported for various troglophilic spiders. Although our findings shed light on the life history of troglobiotic Nesticus and on their role in cave ecosystems, further work is necessary to support effective conservation planning for many of these rare species.

Arthromitus (Bacillus cereus) symbionts in the cockroach Blaberus giganteus: dietary influences on bacterial development and population density

NASA Technical Reports Server (NTRS)

Feinberg, L.; Jorgensen, J.; Haselton, A.; Pitt, A.; Rudner, R.; Margulis, L.

1999-01-01

The filamentous spore-forming bacterium Arthromitus, discovered in termites, millipedes, sow bugs and other soil-dwelling arthropods by Leidy (1850), is the intestinal stage of Bacillus cereus. We extend the range of Arthromitus habitats to include the hindgut of Blaberus giganteus, the large tropical American cockroach. The occurrence and morphology of the intestinal form of the bacillus were compared in individual cockroaches (n=24) placed on four different diet regimes: diurnally maintained insects fed (1) dog food, (2) soy protein only, (3)purified cellulose only, and (4) a dog food-fed group maintained in continuous darkness. Food quality exerted strong influence on population densities and developmental stages of the filamentous bacterium and on fecal pellet composition. The most dramatic rise in Arthromitus populations, defined as the spore-forming filament intestinal stage, occurred in adult cockroaches kept in the dark on a dog food diet. Limited intake of cellulose or protein alone reduced both the frequency of Arthromitus filaments and the rate of weight gain of the insects. Spores isolated from termites, sow bugs, cockroaches and moths, grown on various hard surfaces display a branching mobility and resistance to antibiotics characteristic to group I Bacilli whose members include B. cereus, B. circulans, B. alvei and B. macerans. DNA isolated from pure cultures of these bacilli taken from the guts of Blaberus giganteus (cockroach), Junonia coenia (moth), Porcellio scaber (sow bug) and Cryptotermes brevis (termite) and subjected to Southern hybridization with a 23S-5S B. subtilis ribosomal sequence probe verified that they are indistinguishable from laboratory strains of Bacillus cereus.

A revision of dragon millipedes I: genus Desmoxytes Chamberlin, 1923, with the description of eight new species (Diplopoda, Polydesmida, Paradoxosomatidae)

PubMed Central

Srisonchai, Ruttapon; Enghoff, Henrik; Likhitrakarn, Natdanai; Panha, Somsak

2018-01-01

Abstract The dragon millipede genus Desmoxytes s.l. is split into five genera, based on morphological characters and preliminary molecular phylogenetic analyses. The present article includes a review of Desmoxytes s.s., while future articles will deal with Hylomus Cook and Loomis, 1924 and three new genera which preliminarily are referred to as the ‘acantherpestes’, ‘gigas’, and ‘spiny’ groups. Diagnostic morphological characters of each group are discussed. Hylomus is resurrected as a valid genus and the following 33 species are assigned to it: H. asper (Attems, 1937), comb. n., H. cattienensis (Nguyen, Golovatch & Anichkin, 2005), comb. n., H. cervarius (Attems, 1953), comb. n., H. cornutus (Zhang & Li, 1982), comb. n., H. draco Cook & Loomis, 1924, stat. rev., H. enghoffi (Nguyen, Golovatch & Anichkin, 2005), comb. n., H. eupterygotus (Golovatch, Li, Liu & Geoffroy, 2012), comb. n., H. getuhensis (Liu, Golovatch & Tian, 2014), comb. n., H. grandis (Golovatch, VandenSpiegel & Semenyuk, 2016), comb. n., H. hostilis (Golovatch & Enghoff, 1994), comb. n., H. jeekeli (Golovatch & Enghoff, 1994), comb. n., H. lingulatus (Liu, Golovatch & Tian, 2014), comb. n., H. laticollis (Liu, Golovatch & Tian, 2016), comb. n., H. longispinus (Loksa, 1960), comb. n., H. lui (Golovatch, Li, Liu & Geoffroy, 2012), comb. n., H. minutuberculus (Zhang, 1986), comb. n., H. nodulosus (Liu, Golovatch & Tian, 2014), comb. n., H. parvulus (Liu, Golovatch & Tian, 2014), comb. n., H. phasmoides (Liu, Golovatch & Tian, 2016), comb. n., H. pilosus (Attems, 1937), comb. n., H. proximus (Nguyen, Golovatch & Anichkin, 2005), comb. n., H. rhinoceros (Likhitrakarn, Golovatch & Panha, 2015), comb. n., H. rhinoparvus (Likhitrakarn, Golovatch & Panha, 2015), comb. n., H. scolopendroides (Golovatch, Geoffroy & Mauriès, 2010), comb. n., H. scutigeroides (Golovatch, Geoffroy & Mauriès, 2010), comb. n., H. similis (Liu, Golovatch & Tian, 2016), comb. n., H. simplex (Golovatch, VandenSpiegel & Semenyuk, 2016), comb. n., H. simplipodus (Liu, Golovatch & Tian, 2016), comb. n., H. specialis (Nguyen, Golovatch & Anichkin, 2005), comb. n., H. spectabilis (Attems, 1937), comb. n., H. spinitergus (Liu, Golovatch & Tian, 2016), comb. n., H. spinissimus (Golovatch, Li, Liu & Geoffroy, 2012), comb. n. and H. variabilis (Liu, Golovatch & Tian, 2016), comb. n. Desmoxytes s.s. includes the following species: D. breviverpa Srisonchai, Enghoff & Panha, 2016; D. cervina (Pocock,1895); D. delfae (Jeekel, 1964); D. des Srisonchai, Enghoff & Panha, 2016; D. pinnasquali Srisonchai, Enghoff & Panha, 2016; D. planata (Pocock, 1895); D. purpurosea Enghoff, Sutcharit & Panha, 2007; D. takensis Srisonchai, Enghoff & Panha, 2016; D. taurina (Pocock, 1895); D. terae (Jeekel, 1964), all of which are re-described based mainly on type material. Two new synonyms are proposed: Desmoxytes pterygota Golovatch & Enghoff, 1994, syn. n. (= Desmoxytes cervina (Pocock, 1895)), Desmoxytes rubra Golovatch & Enghoff, 1994, syn. n. (= Desmoxytes delfae (Jeekel, 1964)). Six new species are described from Thailand: D. aurata Srisonchai, Enghoff & Panha, sp. n., D. corythosaurus Srisonchai, Enghoff & Panha, sp. n., D. euros Srisonchai, Enghoff & Panha, sp. n., D. flabella Srisonchai, Enghoff & Panha, sp. n., D. golovatchi Srisonchai, Enghoff & Panha, sp. n., D. octoconigera Srisonchai, Enghoff & Panha, sp. n., as well as one from Malaysia: D. perakensis Srisonchai, Enghoff & Panha, sp. n., and one from Myanmar: D. waepyanensis Srisonchai, Enghoff & Panha, sp. n. The species can mostly be easily distinguished by gonopod structure in combination with other external characters; some cases of particularly similar congeners are discussed. All species of Desmoxytes s.s. seem to be endemic to continental Southeast Asia (except the ‘tramp’ species D. planata). Some biological observations (relationship with mites, moulting) are recorded for the first time. Complete illustrations of external morphological characters, an identification key, and distribution maps of all species are provided. PMID:29875597

A revision of dragon millipedes I: genus Desmoxytes Chamberlin, 1923, with the description of eight new species (Diplopoda, Polydesmida, Paradoxosomatidae).

PubMed

Srisonchai, Ruttapon; Enghoff, Henrik; Likhitrakarn, Natdanai; Panha, Somsak

2018-01-01

The dragon millipede genus Desmoxytes s.l. is split into five genera, based on morphological characters and preliminary molecular phylogenetic analyses. The present article includes a review of Desmoxytes s.s., while future articles will deal with Hylomus Cook and Loomis, 1924 and three new genera which preliminarily are referred to as the ' acantherpestes ', ' gigas ', and ' spiny ' groups. Diagnostic morphological characters of each group are discussed. Hylomus is resurrected as a valid genus and the following 33 species are assigned to it: H. asper (Attems, 1937), comb. n. , H. cattienensis (Nguyen, Golovatch & Anichkin, 2005), comb. n. , H. cervarius (Attems, 1953), comb. n. , H. cornutus (Zhang & Li, 1982), comb. n. , H. draco Cook & Loomis, 1924, stat. rev. , H. enghoffi (Nguyen, Golovatch & Anichkin, 2005), comb. n. , H. eupterygotus (Golovatch, Li, Liu & Geoffroy, 2012), comb. n. , H. getuhensis (Liu, Golovatch & Tian, 2014), comb. n. , H. grandis (Golovatch, VandenSpiegel & Semenyuk, 2016), comb. n. , H. hostilis (Golovatch & Enghoff, 1994), comb. n. , H. jeekeli (Golovatch & Enghoff, 1994), comb. n. , H. lingulatus (Liu, Golovatch & Tian, 2014), comb. n. , H. laticollis (Liu, Golovatch & Tian, 2016), comb. n. , H. longispinus (Loksa, 1960), comb. n. , H. lui (Golovatch, Li, Liu & Geoffroy, 2012), comb. n. , H. minutuberculus (Zhang, 1986), comb. n. , H. nodulosus (Liu, Golovatch & Tian, 2014), comb. n. , H. parvulus (Liu, Golovatch & Tian, 2014), comb. n. , H. phasmoides (Liu, Golovatch & Tian, 2016), comb. n. , H. pilosus (Attems, 1937), comb. n. , H. proximus (Nguyen, Golovatch & Anichkin, 2005), comb. n. , H. rhinoceros (Likhitrakarn, Golovatch & Panha, 2015), comb. n. , H. rhinoparvus (Likhitrakarn, Golovatch & Panha, 2015), comb. n. , H. scolopendroides (Golovatch, Geoffroy & Mauriès, 2010), comb. n. , H. scutigeroides (Golovatch, Geoffroy & Mauriès, 2010), comb. n. , H. similis (Liu, Golovatch & Tian, 2016), comb. n. , H. simplex (Golovatch, VandenSpiegel & Semenyuk, 2016), comb. n. , H. simplipodus (Liu, Golovatch & Tian, 2016), comb. n. , H. specialis (Nguyen, Golovatch & Anichkin, 2005), comb. n. , H. spectabilis (Attems, 1937), comb. n. , H. spinitergus (Liu, Golovatch & Tian, 2016), comb. n. , H. spinissimus (Golovatch, Li, Liu & Geoffroy, 2012), comb. n. and H. variabilis (Liu, Golovatch & Tian, 2016), comb. n. Desmoxytes s.s. includes the following species: D. breviverpa Srisonchai, Enghoff & Panha, 2016; D. cervina (Pocock,1895); D. delfae (Jeekel, 1964); D. des Srisonchai, Enghoff & Panha, 2016; D. pinnasquali Srisonchai, Enghoff & Panha, 2016; D. planata (Pocock, 1895); D. purpurosea Enghoff, Sutcharit & Panha, 2007; D. takensis Srisonchai, Enghoff & Panha, 2016; D. taurina (Pocock, 1895); D. terae (Jeekel, 1964), all of which are re-described based mainly on type material. Two new synonyms are proposed: Desmoxytes pterygota Golovatch & Enghoff, 1994, syn. n. (= Desmoxytes cervina (Pocock, 1895)), Desmoxytes rubra Golovatch & Enghoff, 1994, syn. n. (= Desmoxytes delfae (Jeekel, 1964)). Six new species are described from Thailand: D. aurata Srisonchai, Enghoff & Panha, sp. n. , D. corythosaurus Srisonchai, Enghoff & Panha, sp. n. , D. euros Srisonchai, Enghoff & Panha, sp. n. , D. flabella Srisonchai, Enghoff & Panha, sp. n. , D. golovatchi Srisonchai, Enghoff & Panha, sp. n. , D. octoconigera Srisonchai, Enghoff & Panha, sp. n. , as well as one from Malaysia: D. perakensis Srisonchai, Enghoff & Panha, sp. n. , and one from Myanmar: D. waepyanensis Srisonchai, Enghoff & Panha, sp. n. The species can mostly be easily distinguished by gonopod structure in combination with other external characters; some cases of particularly similar congeners are discussed. All species of Desmoxytes s.s. seem to be endemic to continental Southeast Asia (except the 'tramp' species D. planata ). Some biological observations (relationship with mites, moulting) are recorded for the first time. Complete illustrations of external morphological characters, an identification key, and distribution maps of all species are provided.

Initial growth of leguminous trees and shrubs in a cut gold mined area in Minas Gerais State, Brazil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dias, L.E.; Campello, E.F.C.; Ribeiro, E.S. Jr.

In an opencast gold mining in Minas Gerais State, Brazil, leguminous trees and shrubs were used to revegetate an acid cut mined area. the substrate was high in pyrite content (3%) and received 50 cm of covered material in two layers: (1) insulating layer of 20 cm where clay or a mining refuse (MR) was used to prevent the pyrite oxidation, and (2) an upper layer with 30 cm formed by topsoil or topsoil + urban compost (3:1 v/v). After the application of the cover materials, planting holes were manually made spaced by 1 x 1 m. Each hole receivedmore » limestone (100 g), rock phosphate (150 g), potassium chloride (45 g) and cattle manure (2 L). Fifteen leguminous species were planted an each plot (15 x 8 m), spaced by 1.0 x 1.0 m (one specie per row). Sixteen months after the planting the plants were evaluated and the results showed an effect of substrate on the plants survival, height, and diameter. The use of clay as insulating layer was better than mining refuse and the plants did not respond to the addition of urban compost to the topsoil. Among the evaluated species, Thephrosia sinapau, Erytrina verna, Dipterix alata and Stryphnodenadrum guyanensis showed a mortality rate of 100% after 16 months while Sesbania marginata, Acacaia holosericea, Mimosa pellita, Acacia crassicarpa, Acacia mangium and Acacia angustissima exhibited more adaptation capacity to the acid substrate. Analyses from the substrate showed higher exchangeable acidity (Al{sup 3+}) for the plots receiving MR as insulating layer. This study has applications for the acid mine drainage from coal mines of Brazil.« less

Using mushroom farm and anaerobic digestion wastewaters as supplemental fertilizer sources for growing container nursery stock in a closed system.

PubMed

Chong, C; Purvis, P; Lumis, G; Holbein, B E; Voroney, R P; Zhou, H; Liu, H-W; Alam, M Z

2008-04-01

Wastewaters from farm and composting operations are often rich in select nutrients that potentially can be reutilized in crop production. Liners of silverleaf dogwood (Cornus alba L. 'Argenteo-marginata'), common ninebark [Physocarpus opulifolius (L.) Maxim.], and Anthony Waterer spirea (Spiraeaxbumalda Burvénich 'Anthony Waterer') were grown in 6L containers filled with a bark-based commercial mix. Plants were fertigated daily via a computer-controlled multi-fertilizer injector with three recirculated fertilizer treatments: (1) a stock (control) solution with complete macro- and micro-nutrients, electrical conductivity (EC) 2.2 dS m(-1); (2) wastewater from a mushroom farm; and (3) process wastewater from anaerobic digestion of municipal solid waste. The wastewaters used in both treatments 2 and 3 were diluted with tap water, and the computer was programmed to amend, dispense and recirculate nutrients based on the same target EC as in treatment 1. For comparison, there was a traditional controlled-release fertilizer treatment [Nutryon 17-5-12 (17N-2P-10K) plus micro-nutrients topdressed at a rate of 39 g/plant, nutrients not recirculated]. All three species responded similarly to the three recirculated fertilizer treatments. Growth with the recirculated treatments was similar and significantly higher than that obtained with controlled-release fertilizer. Throughout the study, the EC measured in wastewater-derived nutrient solutions, and also in the container substrate, were similar or close to those of the control treatment, although there were small to large differences among individual major nutrients. There was no sign of nutrient deficiency or toxicity symptoms to the plants. Small to moderate excesses in concentrations of SO(4), Na, and/or Cl were physiologically tolerable to the species.

Benthic foraminiferal response to sedimentary disturbance in the Capbreton canyon (Bay of Biscay, NE Atlantic)

NASA Astrophysics Data System (ADS)

Duros, P.; Silva Jacinto, R.; Dennielou, B.; Schmidt, S.; Martinez Lamas, R.; Gautier, E.; Roubi, A.; Gayet, N.

2017-02-01

Living (Rose Bengal stained) and dead benthic foraminifera were investigated at 6 deep-sea sites sampled in the Capbreton canyon area (Bay of Biscay, France). Three sites were located along the canyon axis at 301 m, 983 m and 1478 m and 3 stations were positioned on adjacent terraces at 251 m, 894 m and 1454 m. Sedimentary features indicate that frequent sedimentary disturbances of different magnitudes occur along the Capbreton canyon axis and adjacent terraces. Such environmental conditions cause the presence of very particular benthic environments. Along the 6 studied sites, different foraminiferal responses to various sedimentary patterns are observed revealing the complexity of this canyon environment. Some sites (Gitan 3 (canyon axis), Gitan 5 (canyon axis) and Gitan 6 (terrace)) are characterized by moderate to low standing stocks and low diversity and are mainly dominated by pioneer taxa such as Fursenkoina brady, Reophax dentaliniformis and Technitella melo suggesting a recent response to turbidite deposits recorded at these sites. Others sites (Gitan 1 and Gitan 2) show extremely high standing stocks and are mainly dominated by the opportunistic Bolivina subaenariensis and Bulimina marginata. Such faunal characteristics belonging to a more advanced stage of ecosystem colonization indicates strongly food-enriched sediment but extremely unstable conditions. Moderate standing stocks and diverse assemblage composed of species such as Uvigerina mediterranea and U. peregrina has only been observed at the terrace site Gitan 4. More stable sedimentary conditions recorded at this terrace seem to be suitable to the development of a dense and diverse foraminiferal community. Numerous neritic allochtonous species were observed in the dead foraminiferal fauna. These allochthonous species mainly originate from shelf areas (<60 m).

An Exploration on Greenhouse Gas and Ammonia Production by Insect Species Suitable for Animal or Human Consumption

PubMed Central

Oonincx, Dennis G. A. B.; van Itterbeeck, Joost; Heetkamp, Marcel J. W.; van den Brand, Henry; van Loon, Joop J. A.; van Huis, Arnold

2010-01-01

Background Greenhouse gas (GHG) production, as a cause of climate change, is considered as one of the biggest problems society is currently facing. The livestock sector is one of the large contributors of anthropogenic GHG emissions. Also, large amounts of ammonia (NH3), leading to soil nitrification and acidification, are produced by livestock. Therefore other sources of animal protein, like edible insects, are currently being considered. Methodology/Principal Findings An experiment was conducted to quantify production of carbon dioxide (CO2) and average daily gain (ADG) as a measure of feed conversion efficiency, and to quantify the production of the greenhouse gases methane (CH4) and nitrous oxide (N2O) as well as NH3 by five insect species of which the first three are considered edible: Tenebrio molitor, Acheta domesticus, Locusta migratoria, Pachnoda marginata, and Blaptica dubia. Large differences were found among the species regarding their production of CO2 and GHGs. The insects in this study had a higher relative growth rate and emitted comparable or lower amounts of GHG than described in literature for pigs and much lower amounts of GHG than cattle. The same was true for CO2 production per kg of metabolic weight and per kg of mass gain. Furthermore, also the production of NH3 by insects was lower than for conventional livestock. Conclusions/Significance This study therefore indicates that insects could serve as a more environmentally friendly alternative for the production of animal protein with respect to GHG and NH3 emissions. The results of this study can be used as basic information to compare the production of insects with conventional livestock by means of a life cycle analysis. PMID:21206900

TIR-NBS-LRR genes are rare in monocots: evidence from diverse monocot orders

PubMed Central

Tarr, D Ellen K; Alexander, Helen M

2009-01-01

Background Plant resistance (R) gene products recognize pathogen effector molecules. Many R genes code for proteins containing nucleotide binding site (NBS) and C-terminal leucine-rich repeat (LRR) domains. NBS-LRR proteins can be divided into two groups, TIR-NBS-LRR and non-TIR-NBS-LRR, based on the structure of the N-terminal domain. Although both classes are clearly present in gymnosperms and eudicots, only non-TIR sequences have been found consistently in monocots. Since most studies in monocots have been limited to agriculturally important grasses, it is difficult to draw conclusions. The purpose of our study was to look for evidence of these sequences in additional monocot orders. Findings Using degenerate PCR, we amplified NBS sequences from four monocot species (C. blanda, D. marginata, S. trifasciata, and Spathiphyllum sp.), a gymnosperm (C. revoluta) and a eudicot (C. canephora). We successfully amplified TIR-NBS-LRR sequences from dicot and gymnosperm DNA, but not from monocot DNA. Using databases, we obtained NBS sequences from additional monocots, magnoliids and basal angiosperms. TIR-type sequences were not present in monocot or magnoliid sequences, but were present in the basal angiosperms. Phylogenetic analysis supported a single TIR clade and multiple non-TIR clades. Conclusion We were unable to find monocot TIR-NBS-LRR sequences by PCR amplification or database searches. In contrast to previous studies, our results represent five monocot orders (Poales, Zingiberales, Arecales, Asparagales, and Alismatales). Our results establish the presence of TIR-NBS-LRR sequences in basal angiosperms and suggest that although these sequences were present in early land plants, they have been reduced significantly in monocots and magnoliids. PMID:19785756

Shape, colour plasticity, and habitat use indicate morph-specific camouflage strategies in a marine shrimp.

PubMed

Duarte, Rafael C; Stevens, Martin; Flores, Augusto A V

2016-10-18

Colour and shape polymorphisms are important features of many species and may allow individuals to exploit a wider array of habitats, including through behavioural differences among morphs. In addition, differences among individuals in behaviour and morphology may reflect different strategies, for example utilising different approaches to camouflage. Hippolyte obliquimanus is a small shrimp species inhabiting different shallow-water vegetated habitats. Populations comprise two main morphs: homogeneous shrimp of variable colour (H) and transparent individuals with coloured stripes (ST). These morphs follow different distribution patterns between their main algal habitats; the brown weed Sargassum furcatum and the pink-red weed Galaxaura marginata. In this study, we first investigated morph-specific colour change and habitat selection, as mechanisms underlying camouflage and spatial distribution patterns in nature. Then, we examined habitat fidelity, mobility, and morphological traits, further indicating patterns of habitat use. H shrimp are capable of changing colour in just a few days towards their algal background, achieving better concealment in the more marginal, and less preferred, red weed habitat. Furthermore, laboratory trials showed that habitat fidelity is higher for H shrimp, whereas swimming activity is higher for the ST morph, aligned to morphological evidence indicating these two morphs comprise a more benthic (H) and a more pelagic (ST) life-style, respectively. Results suggest that H shrimp utilise a camouflage strategy specialised to a limited number of backgrounds at any one time, whereas ST individuals comprise a phenotype with more generalist camouflage (transparency) linked to a more generalist background utilisation. The coexistence within a population of distinct morphotypes with apparently alternative strategies of habitat use and camouflage may reflect differential responses to substantial seasonal changes in macroalgal cover. Our findings also demonstrate how colour change, behaviour, morphology, and background use all interact in achieving camouflage.

Cold-water coral habitats of Rockall and Porcupine Bank, NE Atlantic Ocean: Sedimentary facies and benthic foraminiferal assemblages

NASA Astrophysics Data System (ADS)

Smeulders, G. G. B.; Koho, K. A.; de Stigter, H. C.; Mienis, F.; de Haas, H.; van Weering, T. C. E.

2014-01-01

The extent of the cold-water coral mounds in the modern ocean basins has been recently revealed by new state-of-the-art equipment. However, not much is known about their geological extent or development through time. In the facies model presented here seven different types of seabed substrate are distinguished, which may be used for reconstruction of fossil coral habitats. The studied substrates include: off-mound settings, (foram) sands, hardgrounds, dead coral debris, and substrates characterized by a variable density of living coral framework. Whereas sediment characteristics only provide a basis for distinguishing on- and off-mound habitats and the loci of most prolific coral growth, benthic foraminiferal assemblages are the key to identifying different mound substrates in more detail. Specific foraminiferal assemblages are distinguished that are characteristic of these specific environments. Assemblages from off-mound settings are dominated by (attached) epifaunal species such as Cibicides refulgens and Cibicides variabilis. The attached epibenthic species Discanomalina coronata is also common in off-mound sediments, but it is most abundant where hardgrounds have formed. In contrast, the settings with coral debris or living corals attract shallow infaunal species that are associated with more fine-grained soft sediments. The typical ‘living coral assemblage' is composed of Cassidulina obtusa, Bulimina marginata, and Cassidulina laevigata. The abundance of these species shows an almost linear increase with the density of the living coral cover. The benthic foraminifera encountered from off-mound to top-mound settings appear to represent a gradient of decreasing current intensity and availability of suspended food particles, and increasing availability of organic matter associated with fine-grained sediment trapped in between coral framework.

rbcL and matK earn two thumbs up as the core DNA barcode for ferns.

PubMed

Li, Fay-Wei; Kuo, Li-Yaung; Rothfels, Carl J; Ebihara, Atsushi; Chiou, Wen-Liang; Windham, Michael D; Pryer, Kathleen M

2011-01-01

DNA barcoding will revolutionize our understanding of fern ecology, most especially because the accurate identification of the independent but cryptic gametophyte phase of the fern's life history--an endeavor previously impossible--will finally be feasible. In this study, we assess the discriminatory power of the core plant DNA barcode (rbcL and matK), as well as alternatively proposed fern barcodes (trnH-psbA and trnL-F), across all major fern lineages. We also present plastid barcode data for two genera in the hyperdiverse polypod clade--Deparia (Woodsiaceae) and the Cheilanthes marginata group (currently being segregated as a new genus of Pteridaceae)--to further evaluate the resolving power of these loci. Our results clearly demonstrate the value of matK data, previously unavailable in ferns because of difficulties in amplification due to a major rearrangement of the plastid genome. With its high sequence variation, matK complements rbcL to provide a two-locus barcode with strong resolving power. With sequence variation comparable to matK, trnL-F appears to be a suitable alternative barcode region in ferns, and perhaps should be added to the core barcode region if universal primer development for matK fails. In contrast, trnH-psbA shows dramatically reduced sequence variation for the majority of ferns. This is likely due to the translocation of this segment of the plastid genome into the inverted repeat regions, which are known to have a highly constrained substitution rate. Our study provides the first endorsement of the two-locus barcode (rbcL+matK) in ferns, and favors trnL-F over trnH-psbA as a potential back-up locus. Future work should focus on gathering more fern matK sequence data to facilitate universal primer development.

An exploration on greenhouse gas and ammonia production by insect species suitable for animal or human consumption.

PubMed

Oonincx, Dennis G A B; van Itterbeeck, Joost; Heetkamp, Marcel J W; van den Brand, Henry; van Loon, Joop J A; van Huis, Arnold

2010-12-29

Greenhouse gas (GHG) production, as a cause of climate change, is considered as one of the biggest problems society is currently facing. The livestock sector is one of the large contributors of anthropogenic GHG emissions. Also, large amounts of ammonia (NH(3)), leading to soil nitrification and acidification, are produced by livestock. Therefore other sources of animal protein, like edible insects, are currently being considered. An experiment was conducted to quantify production of carbon dioxide (CO₂) and average daily gain (ADG) as a measure of feed conversion efficiency, and to quantify the production of the greenhouse gases methane (CH₄) and nitrous oxide (N₂O) as well as NH₃ by five insect species of which the first three are considered edible: Tenebrio molitor, Acheta domesticus, Locusta migratoria, Pachnoda marginata, and Blaptica dubia. Large differences were found among the species regarding their production of CO₂ and GHGs. The insects in this study had a higher relative growth rate and emitted comparable or lower amounts of GHG than described in literature for pigs and much lower amounts of GHG than cattle. The same was true for CO₂ production per kg of metabolic weight and per kg of mass gain. Furthermore, also the production of NH₃ by insects was lower than for conventional livestock. This study therefore indicates that insects could serve as a more environmentally friendly alternative for the production of animal protein with respect to GHG and NH₃ emissions. The results of this study can be used as basic information to compare the production of insects with conventional livestock by means of a life cycle analysis.

Revision of the Southeast Asian millipede genus Orthomorpha Bollman, 1893, with the proposal of a new genus (Diplopoda, Polydesmida, Paradoxosomatidae)

PubMed Central

Likhitrakarn, Natdanai; Golovatch, Sergei I.; Panha, Somsak

2011-01-01

Abstract The large genus Orthomorpha is rediagnosed and is shown to currently comprise 51 identifiable species ranging from northern Myanmar and Thailand in the Northwest to Lombok Island, Indonesia in the Southeast. Of them, 20 species have been revised and/or abundantly illustrated, based on a restudy of mostly type material; further 12 species are described as new: Orthomorpha atypica sp. n., Orthomorpha communis sp. n., Orthomorpha isarankurai sp. n., Orthomorpha picturata sp. n., Orthomorpha similanensis sp. n., Orthomorpha suberecta sp. n., Orthomorpha tuberculifera sp. n.,Orthomorpha subtuberculifera sp. n. and Orthomorpha latiterga sp. n., all from Thailand, as well as Orthomorpha elevata sp. n.,Orthomorpha spiniformis sp. n. and Orthomorpha subelevata sp. n., from northern Malaysia. The type-species Orthomorpha beaumontii (Le Guillou, 1841) is redescribed in due detail from male material as well, actually being a senior subjective synonym of Orthomorpha spinala (Attems, 1932), syn. n. Two additional new synonymies are proposed: Orthomorpha rotundicollis (Attems, 1937) = Orthomorpha tuberculata (Attems, 1937), syn. n., and Orthomorpha butteli Carl, 1922 = Orthomorpha consocius Chamberlin, 1945, syn. n., the valid names to the left. All species have been keyed and all new and some especially widespread species have been mapped. Further six species, including two revised from type material, are still to be considered dubious, mostly because their paraterga appear to be too narrow to represent Orthomorpha species. A new genus, Orthomorphoides gen. n., diagnosed versus Orthomorpha through only moderately well developed paraterga, coupled with a poorly bi- or trifid gonopod tip, with at least some of its apical prongs being short spines, is erected for two species: Orthomorpha setosus (Attems, 1937), the type-species, which is also revised from type material, and Orthomorpha exaratus (Attems, 1953), both comb. n. ex Orthomorpha. PMID:22140329

Streptosporangium sonchi sp. nov. and Streptosporangium kronopolitis sp. nov., two novel actinobacteria isolated from a root of common sowthistle (Sonchus oleraceus L.) and a millipede (Kronopolites svenhedind Verhoeff).

PubMed

Ma, Zhaoxu; Liu, Hui; Liu, Chongxi; He, Hairong; Zhao, Junwei; Wang, Xin; Li, Jiansong; Wang, Xiangjing; Xiang, Wensheng

2015-06-01

Two novel actinobacteria, designated strains NEAU-QS7(T) and NEAU-ML10(T), were isolated from a root of Sonchus oleraceus L. and a Kronopolites svenhedind Verhoeff specimen, respectively, collected from Wuchang, Heilongjiang Province, China. A polyphasic study was carried out to establish the taxonomic positions of these strains. The two strains were observed to form abundant aerial hyphae that differentiated into spherical spore vesicles. The phylogenetic analysis based on the 16S rRNA gene sequences of strains NEAU-QS7(T) and NEAU-ML10(T) showed that the two novel isolates exhibited 99.7 % 16S rRNA gene sequence similarity with each other and that they are most closely related to Streptosporangium shengliense NEAU-GH7(T) (99.1, 99.0 %) and Streptosporangium longisporum DSM 43180(T) (99.1, 99.0 %). However, the DNA-DNA hybridization value between strains NEAU-QS7(T) and NEAU-ML10(T) was 46.5 %, and the values between the two strains and their closest phylogenetic relatives were also below 70 %. With reference to phenotypic characteristics, phylogenetic data and DNA-DNA hybridization results, the two strains can be distinguished from each other and their closest phylogenetic relatives. Thus, strains NEAU-QS7(T) and NEAU-ML10(T) represent two novel species of the genus Streptosporangium, for which the names Streptosporangium sonchi sp. nov. and Streptosporangium kronopolitis sp. nov. are proposed. The type strains are NEAU-QS7(T) (=CGMCC 4.7142(T) =DSM 46717(T)) and NEAU-ML10(T) (=CGMCC 4.7153(T) =DSM 46720(T)), respectively.

Benthic faunal assemblages from the Holocene middle shelf of the South Evoikos Gulf, central Greece, and their palaeoenvironmental implications

NASA Astrophysics Data System (ADS)

Asimina Louvari, Markella; Tsourou, Theodora; Drinia, Hara; Anastasakis, George

2013-04-01

South Evoikos Gulf is an elongate, WNW - ESE trending basin, 60 km long and 15 km wide. Its floor slopes towards the south-east where the basin connects with the Aegean Sea across a 55 m deep sill. The hydrographic network of the area is characterized by Asopos river the small Lilas River and some other ephemeral streams. A sedimentary record spanning the last 13000 calyr BP was recovered at N 38°12'23.1228" E 24°8'14.2404", water depth 70 m, in this gulf. A total of 52 samples from the lower half of the core were quantitatively analyzed for micropalaeontological (benthic foraminifera and ostracods) study in order to reconstruct palaeoenvironmental conditions. This work contributes to the evaluation of the modern environmental problems in South Evoikos Gulf (hypoxia, ecosystem changes, subaquatic vegetation die-off, metal pollution) within the context of the palaeoenvironmental record. In the investigated core, the benthic microfaunal assemblages indicate a marine coastal environment with a gradual transition from a circalittoral to an infralittoral restricted environment. The basal part of the record is characterized by Haynesina depressula Assemblage, which is composed of Haynesina depressula, Textularia agglutinans and Bulimina aculeata.The abundance of Haynesina depressula could be associated with normal marine conditions, but always with periodic brackish water influence. The species composed this assemblage, which are almost all typically infaunal, characterize sediments with a high or medium-high muddy fraction, rich in organic matter available for the organisms that live within the sediment, and low salinity bottom water. Samples from the upper unit of the core indicate a nearshore, inner-shelf facies less than 50 m deep. Common inner-shelf species in these samples include Ammonia beccarii together with Bulimina marginata (Sgarrella & Moncharmont Zei, 1993). The highest abundance of A. beccarii is found between 15 and 20 m water-depth in samples with intermediate percentages of organic matter in which at least some sand fraction is present. A strict interpretation based on the known modern distribution of A. beccarii would confine the species to upper shoreface environments (Hayward et al. 2004). The relatively high frequency values of B. marginata indicate a correlation with organic matter enrichment, with seasonal low oxygen content. This hypothesis is testified also by the increase of the opportunistic species V. bradyana. The temporal presence of V. bradyana assemblage indicates a strong influence of Asopos River run-off, with interplay of increasing food availability and low oxygen concentration Three main ostracod assemblages were distinguished from the bottom to the top of the sediment core: At the lower part of the core ostracod assemblage consists mainly of Costa edwardsii, Cytheridea neapolitana, Callistocythere spp., Pterygocythereis jonesii and Leptocythere spp. At the middle part, Costa edwardsii is the dominant species with relative abundances up to 80% of the total ostracod fauna. At the upper part Costa edwardsii is the most abundant species (20-40% of the total fauna) accompanied mainly by Loxoconcha spp., Xestoleberis spp. and Cyprideis torosa. Ostracod abundance and diversity decrease towards the upper unit of the studied core. These data, and AMS radiocarbon ages determined for foraminifera and ostracods, provide evidence of a change from oceanic influence to estuarine influence. This event is also contemporaneous with the period which is generally characterized by increased evaporation rate (initially at the tropic seas), retreat of glaciers and increased rainfalls (Fairbanks, 1989). Fairbanks, R.G., 1989. A 17,000 year glacio-eustatic sea level record: influence of glacial melting rates on the Younger Dryas event and deep ocean circulation. Nature, 342, 637-642. Hayward, B.W., Sabaa, A.T., Grenfell, H.R., 2004. Benthic foraminifera and the Late Quaternary (last 150 ka) palaeoceanographic and sedimentary history of the Bounty Trough, east of New Zealand. Palaeogeography, Palaeoclimatology, Palaeoecology, 211(1-2), 59-93, doi:10.1016/j.palaeo.2004.04.007 Sgarrella, F. & Moncharmon-Zei, M. 1993. Benthic foraminifera in the Gulf of Naples (Italy): systematic and autoecology, Boll. Soc. Palaeont. Ital. 32, 145-264. This research has been co-financed by the European Union (European Social Fund - ESF) and Greek national funds through the Operational Program "Education and Lifelong Learning" of the National Strategic Reference Framework (NSRF) - Research Funding Program: THALIS -UOA-70/3/11669.

Fungal Planet description sheets: 320-370.

PubMed

Crous, P W; Wingfield, M J; Guarro, J; Hernández-Restrepo, M; Sutton, D A; Acharya, K; Barber, P A; Boekhout, T; Dimitrov, R A; Dueñas, M; Dutta, A K; Gené, J; Gouliamova, D E; Groenewald, M; Lombard, L; Morozova, O V; Sarkar, J; Smith, M Th; Stchigel, A M; Wiederhold, N P; Alexandrova, A V; Antelmi, I; Armengol, J; Barnes, I; Cano-Lira, J F; Castañeda Ruiz, R F; Contu, M; Courtecuisse, Pr R; da Silveira, A L; Decock, C A; de Goes, A; Edathodu, J; Ercole, E; Firmino, A C; Fourie, A; Fournier, J; Furtado, E L; Geering, A D W; Gershenzon, J; Giraldo, A; Gramaje, D; Hammerbacher, A; He, X-L; Haryadi, D; Khemmuk, W; Kovalenko, A E; Krawczynski, R; Laich, F; Lechat, C; Lopes, U P; Madrid, H; Malysheva, E F; Marín-Felix, Y; Martín, M P; Mostert, L; Nigro, F; Pereira, O L; Picillo, B; Pinho, D B; Popov, E S; Rodas Peláez, C A; Rooney-Latham, S; Sandoval-Denis, M; Shivas, R G; Silva, V; Stoilova-Disheva, M M; Telleria, M T; Ullah, C; Unsicker, S B; van der Merwe, N A; Vizzini, A; Wagner, H-G; Wong, P T W; Wood, A R; Groenewald, J Z

2015-06-01

Novel species of fungi described in the present study include the following from Malaysia: Castanediella eucalypti from Eucalyptus pellita, Codinaea acacia from Acacia mangium, Emarcea eucalyptigena from Eucalyptus brassiana, Myrtapenidiella eucalyptorum from Eucalyptus pellita, Pilidiella eucalyptigena from Eucalyptus brassiana and Strelitziana malaysiana from Acacia mangium. Furthermore, Stachybotrys sansevieriicola is described from Sansevieria ehrenbergii (Tanzania), Phacidium grevilleae from Grevillea robusta (Uganda), Graphium jumulu from Adansonia gregorii and Ophiostoma eucalyptigena from Eucalyptus marginata (Australia), Pleurophoma ossicola from bone and Plectosphaerella populi from Populus nigra (Germany), Colletotrichum neosansevieriae from Sansevieria trifasciata, Elsinoë othonnae from Othonna quinquedentata and Zeloasperisporium cliviae (Zeloasperisporiaceae fam. nov.) from Clivia sp. (South Africa), Neodevriesia pakbiae, Phaeophleospora hymenocallidis and Phaeophleospora hymenocallidicola on leaves of a fern (Thailand), Melanconium elaeidicola from Elaeis guineensis (Indonesia), Hormonema viticola from Vitis vinifera (Canary Islands), Chlorophyllum pseudoglobossum from a grassland (India), Triadelphia disseminata from an immunocompromised patient (Saudi Arabia), Colletotrichum abscissum from Citrus (Brazil), Polyschema sclerotigenum and Phialemonium limoniforme from human patients (USA), Cadophora vitícola from Vitis vinifera (Spain), Entoloma flavovelutinum and Bolbitius aurantiorugosus from soil (Vietnam), Rhizopogon granuloflavus from soil (Cape Verde Islands), Tulasnella eremophila from Euphorbia officinarum subsp. echinus (Morocco), Verrucostoma martinicensis from Danaea elliptica (French West Indies), Metschnikowia colchici from Colchicum autumnale (Bulgaria), Thelebolus microcarpus from soil (Argentina) and Ceratocystis adelpha from Theobroma cacao (Ecuador). Myrmecridium iridis (Myrmecridiales ord. nov., Myrmecridiaceae fam. nov.) is also described from Iris sp. (The Netherlands). Novel genera include (Ascomycetes): Budhanggurabania from Cynodon dactylon (Australia), Soloacrosporiella, Xenocamarosporium, Neostrelitziana and Castanediella from Acacia mangium and Sabahriopsis from Eucalyptus brassiana (Malaysia), Readerielliopsis from basidiomata of Fuscoporia wahlbergii (French Guyana), Neoplatysporoides from Aloe ferox (Tanzania), Wojnowiciella, Chrysofolia and Neoeriomycopsis from Eucalyptus (Colombia), Neophaeomoniella from Eucalyptus globulus (USA), Pseudophaeomoniella from Olea europaea (Italy), Paraphaeomoniella from Encephalartos altensteinii, Aequabiliella, Celerioriella and Minutiella from Prunus (South Africa). Tephrocybella (Basidiomycetes) represents a novel genus from wood (Italy). Morphological and culture characteristics along with ITS DNA barcodes are provided for all taxa.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Parham, James F.; Macey, J. Robert; Papenfuss, Theodore J.

As part of an ongoing project to generate a mitochondrial database for terrestrial tortoises based on museum specimens, the complete mitochondrial genome sequences of 10 species and a {approx}14 kb sequence from an eleventh species are reported. The sampling of the present study emphasizes Mediterranean tortoises (genus Testudo and their close relatives). Our new sequences are aligned, along with those of two testudinoid turtles from GenBank, Chrysemys picta and Mauremys reevesii, yielding an alignment of 14,858 positions, of which 3,238 are parsimony informative. We develop a phylogenetic taxonomy for Testudo and related species based on well-supported, diagnosable clades. Several well-supportedmore » nodes are recovered, including the monophyly of a restricted Testudo, T. kleinmanni + T. marginata (the Chersus clade), and the placement of the enigmatic African pancake tortoise (Malacochersustornieri) within the predominantly Palearctic greater Testudo group (Testudona tax. nov.). Despite the large amount of sequence reported, there is low statistical support for some nodes within Testudona and Sowe do not propose names for those groups. A preliminary and conservative estimation of divergence times implies a late Miocene diversification for the testudonan clade (6-12 million years ago), matching their first appearance in the fossil record. The multi-continental distribution of testudonan turtles can be explained by the establishment of permanent connections between Europe, Africa, and Asia at this time. The arrival of testudonan turtles to Africa occurred after one or more initial tortoise invasions gave rise to the diverse (>25 species) 'Geochelone complex.'Two unusual genomic features are reported for the mtDNA of one tortoise, M. tornieri: (1) nad4 has a shift of reading frame that we suggest is resolved by translational frameshifting of the mRNA on the ribosome during protein synthesis and (2) there are two copies of the control region and trnF, with the latter having experienced multiple nucleotide substitutions in a pattern suggesting that each is being maintained by selection.« less

Endemic angiostrongyliasis in the Brazilian Amazon: natural parasitism of Angiostrongylus cantonensis in Rattus rattus and R. norvegicus, and sympatric giant African land snails, Achatina fulica.

PubMed

Moreira, V L C; Giese, E G; Melo, F T V; Simões, R O; Thiengo, S C; Maldonado, A; Santos, J N

2013-01-01

Angiostrongylus cantonensis, the rat lungworm, is one etiological agent of eosinophilic meningoencephalitis in humans. This zoonosis is frequently found in Asia and, more recently, in North America, Caribbean Island and northeastern of South America. Until now, research of A. cantonensis in southern, southeastern and northeastern regions of Brazil has been found natural infections only terrestrial and freshwater intermediate snail hosts (Achatina fulica, Sarasinula marginata, Subulina octona, Bradybaena similaris and Pomacea lineate). In this study, we examined the occurrence of helminthes in the synantropic rodents Rattus rattus and Rattus norvegicus in northern Brazil, focusing on the role of these species as vertebrate hosts of A. cantonensis and A. fulica as intermediate host have found natural. Thirty specimens of R. rattus and twelve of R. norvegicus were collected in the Guamá and Jurunas neighborhoods of the city of Belém, in the Brazilian state of Pará, of which almost 10% harbored adult worms in their pulmonary arteries. Sympatric A. fulica were found to be infected by L(3) larvae, which experimental infection confirmed to be A. cantonensis. Natural infection of snails and rodents with A. cantonensis was confirmed through morphological and morphometrical analyses of adults and larvae using light microscopy, scanning electron microscopy and molecular sequences of partial Cytochrome Oxidase subunit I. Phylogenetic analyses showed that A. cantonensis isolated from Pará, Brazil is similar to Japan isolate; once these specimens produced a single haplotype with high bootstrap support with Rio de Janeiro isolate. This study confirms that A. cantonensis is now endemic in northern Brazil, and that R. rattus and R. norvegicus act as natural definitive hosts, and A. fulica as the intermediate host of the parasite in this region. Copyright © 2012 Elsevier B.V. All rights reserved.

Ethnobotanical survey of traditionally used medicinal plants for infections of skin, gastrointestinal tract, urinary tract and the oral cavity in Borabu sub-county, Nyamira county, Kenya.

PubMed

Omwenga, E O; Hensel, A; Shitandi, A; Goycoolea, F M

2015-12-24

Different communities throughout the world have specialized and profound knowledge on the use medicinal plants for various diseases. However, the detailed information on the respective use may extinct in near future as this knowledge is passed only orally among generations in most of the communities. The present survey aimed to document the use of medicinal plants by traditional healers from the Kisii community, Borabu sub-county in Nyamira county, Kenya, to treat infections of the urinary tract, oral cavity, gastrointestinal system and the skin and to evaluate the social context in which the healers work and practice. Validated questionnaires were applied to 50 traditional healers in the study region, followed by interviews and structured conversations. Information on the relevant traditionally used medicinal plants and their use were documented, including sampling and identification of voucher specimens. The ethnopharmacological survey revealed 25 medicinal plant species belonging to 19 families. It got evident that most of these species will be extinct in the near future unless appropriate measures are taken, as it turned out difficult to collect some of the wild growing species. Elaeodendron buchananii Loes, Erlangea marginata S. Moore, Acacia gerrardii Benth., Balanites orbicularis Sprague, Solanum renschii Vatke and Orthosiphon hildebrandtii Vatke have not been described before for its medicinal use. Among the 25 species collected from the various regions of Borabu sub-county Urtica dioica L. was the only medicinal plant that was collected from all regions. In contrast Erythrina abyssinica and Rhus natalensis were found in only two regions of the study area. The traditional medicinal use of the reported plants for infections should be documented and a great need of awareness from scientists and local government for improved preservation or field cultivation of some species is obvious. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

rbcL and matK Earn Two Thumbs Up as the Core DNA Barcode for Ferns

PubMed Central

Li, Fay-Wei; Kuo, Li-Yaung; Rothfels, Carl J.; Ebihara, Atsushi; Chiou, Wen-Liang; Windham, Michael D.; Pryer, Kathleen M.

2011-01-01

Background DNA barcoding will revolutionize our understanding of fern ecology, most especially because the accurate identification of the independent but cryptic gametophyte phase of the fern's life history—an endeavor previously impossible—will finally be feasible. In this study, we assess the discriminatory power of the core plant DNA barcode (rbcL and matK), as well as alternatively proposed fern barcodes (trnH-psbA and trnL-F), across all major fern lineages. We also present plastid barcode data for two genera in the hyperdiverse polypod clade—Deparia (Woodsiaceae) and the Cheilanthes marginata group (currently being segregated as a new genus of Pteridaceae)—to further evaluate the resolving power of these loci. Principal Findings Our results clearly demonstrate the value of matK data, previously unavailable in ferns because of difficulties in amplification due to a major rearrangement of the plastid genome. With its high sequence variation, matK complements rbcL to provide a two-locus barcode with strong resolving power. With sequence variation comparable to matK, trnL-F appears to be a suitable alternative barcode region in ferns, and perhaps should be added to the core barcode region if universal primer development for matK fails. In contrast, trnH-psbA shows dramatically reduced sequence variation for the majority of ferns. This is likely due to the translocation of this segment of the plastid genome into the inverted repeat regions, which are known to have a highly constrained substitution rate. Conclusions Our study provides the first endorsement of the two-locus barcode (rbcL+matK) in ferns, and favors trnL-F over trnH-psbA as a potential back-up locus. Future work should focus on gathering more fern matK sequence data to facilitate universal primer development. PMID:22028918

Review of the millipede family Opisotretidae (Diplopoda, Polydesmida), with descriptions of new species

PubMed Central

Golovatch, Sergei I.; Geoffroy, Jean-Jacques; Stoev, Pavel; Spiegel, Didier Vanden

2013-01-01

Abstract The small, basically Oriental family Opisotretidae is rediagnosed, reclassified, and shown to comprise the following seven genera, all keyed: Carlotretus Hoffman, 1980, with two species, including Carlotretus triramus sp. n. from southern China; Corypholophus Attems, 1938, with two species, one in Vietnam, the other in the Ryukyus, Japan; Martensodesmus Golovatch, 1987, with eight species, all keyed, including Martensodesmus cattienensis sp. n. from southern Vietnam, as well as Martensodesmus bedosae sp. n. and Martensodesmus spiniger sp. n. from southern China; Opisotretus Attems, 1907, with seven species, all keyed, including Opisotretus beroni sp. n. and Opisotretus hagen sp. n., both from Papua New Guinea, Opisotretus deharvengi sp. n. from Sulawesi, Indonesia, and Opisotretus spinosus sp. n. from Nusakambangan Island, off Java, Indonesia; Opisthoporodesmus Silvestri, 1899, with six nominate species; Retrodesmus Chamberlin, 1945, with two species, i.e. the type-species Retrodesmus dammermani Chamberlin, 1945, from Java, Indonesia, revised from the holotype, and Retrodesmus cavernicola sp. n., from Papua New Guinea; and Solaenaulus Attems, 1940, with two species. Comments are presented on the family’s possible relationships and palaeogeographic history. Instead of being considered as the sole component of the superfamily Opisotretoidea, the Opisotretidae is believed here to form one of the families of the diverse superfamily Trichopolydesmoidea, perhaps the sister-group to, if not immediately derived from, the pantropical family Fuhrmannodesmidae. The origin of Opisotretidae, previously dated as far back as the Triassic (220 Ma) in relation to the fragmentation of eastern Gondwanaland, mainly in the region of present-day Indonesia, could have had nothing to do with Gondwanaland. Opisotretids might have originated in mainland Southeast Asia well within the Cenozoic, with subsequent dispersals along the Himalayas in the West and across Indonesia (including New Guinea) in the East, also reaching as far north as the Ryukyus, Japan and Guangxi, southern China. PMID:23794898

Ground-Dwelling Arthropod Communities of a Sky Island Mountain Range in Southeastern Arizona, USA: Obtaining a Baseline for Assessing the Effects of Climate Change

PubMed Central

Meyer, Wallace M.; Eble, Jeffrey A.; Franklin, Kimberly; McManus, Reilly B.; Brantley, Sandra L.; Henkel, Jeff; Marek, Paul E.; Hall, W. Eugene; Olson, Carl A.; McInroy, Ryan; Bernal Loaiza, Emmanuel M.; Brusca, Richard C.; Moore, Wendy

2015-01-01

The few studies that have addressed past effects of climate change on species distributions have mostly focused on plants due to the rarity of historical faunal baselines. However, hyperdiverse groups like Arthropoda are vital to monitor in order to understand climate change impacts on biodiversity. This is the first investigation of ground-dwelling arthropod (GDA) assemblages along the full elevation gradient of a mountain range in the Madrean Sky Island Region, establishing a baseline for monitoring future changes in GDA biodiversity. To determine how GDA assemblages relate to elevation, season, abiotic variables, and corresponding biomes, GDA were collected for two weeks in both spring (May) and summer (September) 2011 in the Santa Catalina Mountains, Arizona, using pitfall traps at 66 sites in six distinct upland (non-riparian/non-wet canyon) biomes. Four arthropod taxa: (1) beetles (Coleoptera), (2) spiders (Araneae), (3) grasshoppers and crickets (Orthoptera), and (4) millipedes and centipedes (Myriapoda) were assessed together and separately to determine if there are similar patterns across taxonomic groups. We collected 335 species of GDA: 192/3793 (species/specimens) Coleoptera, 102/1329 Araneae, 25/523 Orthoptera, and 16/697 Myriapoda. GDA assemblages differed among all biomes and between seasons. Fifty-three percent (178 species) and 76% (254 species) of all GDA species were found in only one biome and during only one season, respectively. While composition of arthropod assemblages is tied to biome and season, individual groups do not show fully concordant patterns. Seventeen percent of the GDA species occurred only in the two highest-elevation biomes (Pine and Mixed Conifer Forests). Because these high elevation biomes are most threatened by climate change and they harbor a large percentage of unique arthropod species (11–25% depending on taxon), significant loss in arthropod diversity is likely in the Santa Catalina Mountains and other isolated mountain ranges in the Southwestern US. PMID:26332685

Ground-Dwelling Arthropod Communities of a Sky Island Mountain Range in Southeastern Arizona, USA: Obtaining a Baseline for Assessing the Effects of Climate Change.

PubMed

Meyer, Wallace M; Eble, Jeffrey A; Franklin, Kimberly; McManus, Reilly B; Brantley, Sandra L; Henkel, Jeff; Marek, Paul E; Hall, W Eugene; Olson, Carl A; McInroy, Ryan; Bernal Loaiza, Emmanuel M; Brusca, Richard C; Moore, Wendy

2015-01-01

The few studies that have addressed past effects of climate change on species distributions have mostly focused on plants due to the rarity of historical faunal baselines. However, hyperdiverse groups like Arthropoda are vital to monitor in order to understand climate change impacts on biodiversity. This is the first investigation of ground-dwelling arthropod (GDA) assemblages along the full elevation gradient of a mountain range in the Madrean Sky Island Region, establishing a baseline for monitoring future changes in GDA biodiversity. To determine how GDA assemblages relate to elevation, season, abiotic variables, and corresponding biomes, GDA were collected for two weeks in both spring (May) and summer (September) 2011 in the Santa Catalina Mountains, Arizona, using pitfall traps at 66 sites in six distinct upland (non-riparian/non-wet canyon) biomes. Four arthropod taxa: (1) beetles (Coleoptera), (2) spiders (Araneae), (3) grasshoppers and crickets (Orthoptera), and (4) millipedes and centipedes (Myriapoda) were assessed together and separately to determine if there are similar patterns across taxonomic groups. We collected 335 species of GDA: 192/3793 (species/specimens) Coleoptera, 102/1329 Araneae, 25/523 Orthoptera, and 16/697 Myriapoda. GDA assemblages differed among all biomes and between seasons. Fifty-three percent (178 species) and 76% (254 species) of all GDA species were found in only one biome and during only one season, respectively. While composition of arthropod assemblages is tied to biome and season, individual groups do not show fully concordant patterns. Seventeen percent of the GDA species occurred only in the two highest-elevation biomes (Pine and Mixed Conifer Forests). Because these high elevation biomes are most threatened by climate change and they harbor a large percentage of unique arthropod species (11-25% depending on taxon), significant loss in arthropod diversity is likely in the Santa Catalina Mountains and other isolated mountain ranges in the Southwestern US.

Predicting the Occurrence of Cave-Inhabiting Fauna Based on Features of the Earth Surface Environment.

PubMed

Christman, Mary C; Doctor, Daniel H; Niemiller, Matthew L; Weary, David J; Young, John A; Zigler, Kirk S; Culver, David C

2016-01-01

One of the most challenging fauna to study in situ is the obligate cave fauna because of the difficulty of sampling. Cave-limited species display patchy and restricted distributions, but it is often unclear whether the observed distribution is a sampling artifact or a true restriction in range. Further, the drivers of the distribution could be local environmental conditions, such as cave humidity, or they could be associated with surface features that are surrogates for cave conditions. If surface features can be used to predict the distribution of important cave taxa, then conservation management is more easily obtained. We examined the hypothesis that the presence of major faunal groups of cave obligate species could be predicted based on features of the earth surface. Georeferenced records of cave obligate amphipods, crayfish, fish, isopods, beetles, millipedes, pseudoscorpions, spiders, and springtails within the area of Appalachian Landscape Conservation Cooperative in the eastern United States (Illinois to Virginia and New York to Alabama) were assigned to 20 x 20 km grid cells. Habitat suitability for these faunal groups was modeled using logistic regression with twenty predictor variables within each grid cell, such as percent karst, soil features, temperature, precipitation, and elevation. Models successfully predicted the presence of a group greater than 65% of the time (mean = 88%) for the presence of single grid cell endemics, and for all faunal groups except pseudoscorpions. The most common predictor variables were latitude, percent karst, and the standard deviation of the Topographic Position Index (TPI), a measure of landscape rugosity within each grid cell. The overall success of these models points to a number of important connections between the surface and cave environments, and some of these, especially soil features and topographic variability, suggest new research directions. These models should prove to be useful tools in predicting the presence of species in understudied areas.

The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima.

PubMed

Chipman, Ariel D; Ferrier, David E K; Brena, Carlo; Qu, Jiaxin; Hughes, Daniel S T; Schröder, Reinhard; Torres-Oliva, Montserrat; Znassi, Nadia; Jiang, Huaiyang; Almeida, Francisca C; Alonso, Claudio R; Apostolou, Zivkos; Aqrawi, Peshtewani; Arthur, Wallace; Barna, Jennifer C J; Blankenburg, Kerstin P; Brites, Daniela; Capella-Gutiérrez, Salvador; Coyle, Marcus; Dearden, Peter K; Du Pasquier, Louis; Duncan, Elizabeth J; Ebert, Dieter; Eibner, Cornelius; Erikson, Galina; Evans, Peter D; Extavour, Cassandra G; Francisco, Liezl; Gabaldón, Toni; Gillis, William J; Goodwin-Horn, Elizabeth A; Green, Jack E; Griffiths-Jones, Sam; Grimmelikhuijzen, Cornelis J P; Gubbala, Sai; Guigó, Roderic; Han, Yi; Hauser, Frank; Havlak, Paul; Hayden, Luke; Helbing, Sophie; Holder, Michael; Hui, Jerome H L; Hunn, Julia P; Hunnekuhl, Vera S; Jackson, LaRonda; Javaid, Mehwish; Jhangiani, Shalini N; Jiggins, Francis M; Jones, Tamsin E; Kaiser, Tobias S; Kalra, Divya; Kenny, Nathan J; Korchina, Viktoriya; Kovar, Christie L; Kraus, F Bernhard; Lapraz, François; Lee, Sandra L; Lv, Jie; Mandapat, Christigale; Manning, Gerard; Mariotti, Marco; Mata, Robert; Mathew, Tittu; Neumann, Tobias; Newsham, Irene; Ngo, Dinh N; Ninova, Maria; Okwuonu, Geoffrey; Ongeri, Fiona; Palmer, William J; Patil, Shobha; Patraquim, Pedro; Pham, Christopher; Pu, Ling-Ling; Putman, Nicholas H; Rabouille, Catherine; Ramos, Olivia Mendivil; Rhodes, Adelaide C; Robertson, Helen E; Robertson, Hugh M; Ronshaugen, Matthew; Rozas, Julio; Saada, Nehad; Sánchez-Gracia, Alejandro; Scherer, Steven E; Schurko, Andrew M; Siggens, Kenneth W; Simmons, DeNard; Stief, Anna; Stolle, Eckart; Telford, Maximilian J; Tessmar-Raible, Kristin; Thornton, Rebecca; van der Zee, Maurijn; von Haeseler, Arndt; Williams, James M; Willis, Judith H; Wu, Yuanqing; Zou, Xiaoyan; Lawson, Daniel; Muzny, Donna M; Worley, Kim C; Gibbs, Richard A; Akam, Michael; Richards, Stephen

2014-11-01

Myriapods (e.g., centipedes and millipedes) display a simple homonomous body plan relative to other arthropods. All members of the class are terrestrial, but they attained terrestriality independently of insects. Myriapoda is the only arthropod class not represented by a sequenced genome. We present an analysis of the genome of the centipede Strigamia maritima. It retains a compact genome that has undergone less gene loss and shuffling than previously sequenced arthropods, and many orthologues of genes conserved from the bilaterian ancestor that have been lost in insects. Our analysis locates many genes in conserved macro-synteny contexts, and many small-scale examples of gene clustering. We describe several examples where S. maritima shows different solutions from insects to similar problems. The insect olfactory receptor gene family is absent from S. maritima, and olfaction in air is likely effected by expansion of other receptor gene families. For some genes S. maritima has evolved paralogues to generate coding sequence diversity, where insects use alternate splicing. This is most striking for the Dscam gene, which in Drosophila generates more than 100,000 alternate splice forms, but in S. maritima is encoded by over 100 paralogues. We see an intriguing linkage between the absence of any known photosensory proteins in a blind organism and the additional absence of canonical circadian clock genes. The phylogenetic position of myriapods allows us to identify where in arthropod phylogeny several particular molecular mechanisms and traits emerged. For example, we conclude that juvenile hormone signalling evolved with the emergence of the exoskeleton in the arthropods and that RR-1 containing cuticle proteins evolved in the lineage leading to Mandibulata. We also identify when various gene expansions and losses occurred. The genome of S. maritima offers us a unique glimpse into the ancestral arthropod genome, while also displaying many adaptations to its specific life history.

Predicting the Occurrence of Cave-Inhabiting Fauna Based on Features of the Earth Surface Environment

PubMed Central

Doctor, Daniel H.; Niemiller, Matthew L.; Weary, David J.; Young, John A.; Zigler, Kirk S.

2016-01-01

One of the most challenging fauna to study in situ is the obligate cave fauna because of the difficulty of sampling. Cave-limited species display patchy and restricted distributions, but it is often unclear whether the observed distribution is a sampling artifact or a true restriction in range. Further, the drivers of the distribution could be local environmental conditions, such as cave humidity, or they could be associated with surface features that are surrogates for cave conditions. If surface features can be used to predict the distribution of important cave taxa, then conservation management is more easily obtained. We examined the hypothesis that the presence of major faunal groups of cave obligate species could be predicted based on features of the earth surface. Georeferenced records of cave obligate amphipods, crayfish, fish, isopods, beetles, millipedes, pseudoscorpions, spiders, and springtails within the area of Appalachian Landscape Conservation Cooperative in the eastern United States (Illinois to Virginia and New York to Alabama) were assigned to 20 x 20 km grid cells. Habitat suitability for these faunal groups was modeled using logistic regression with twenty predictor variables within each grid cell, such as percent karst, soil features, temperature, precipitation, and elevation. Models successfully predicted the presence of a group greater than 65% of the time (mean = 88%) for the presence of single grid cell endemics, and for all faunal groups except pseudoscorpions. The most common predictor variables were latitude, percent karst, and the standard deviation of the Topographic Position Index (TPI), a measure of landscape rugosity within each grid cell. The overall success of these models points to a number of important connections between the surface and cave environments, and some of these, especially soil features and topographic variability, suggest new research directions. These models should prove to be useful tools in predicting the presence of species in understudied areas. PMID:27532611

The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima

PubMed Central

Chipman, Ariel D.; Ferrier, David E. K.; Brena, Carlo; Qu, Jiaxin; Hughes, Daniel S. T.; Schröder, Reinhard; Torres-Oliva, Montserrat; Znassi, Nadia; Jiang, Huaiyang; Almeida, Francisca C.; Alonso, Claudio R.; Apostolou, Zivkos; Aqrawi, Peshtewani; Arthur, Wallace; Barna, Jennifer C. J.; Blankenburg, Kerstin P.; Brites, Daniela; Capella-Gutiérrez, Salvador; Coyle, Marcus; Dearden, Peter K.; Du Pasquier, Louis; Duncan, Elizabeth J.; Ebert, Dieter; Eibner, Cornelius; Erikson, Galina; Evans, Peter D.; Extavour, Cassandra G.; Francisco, Liezl; Gabaldón, Toni; Gillis, William J.; Goodwin-Horn, Elizabeth A.; Green, Jack E.; Griffiths-Jones, Sam; Grimmelikhuijzen, Cornelis J. P.; Gubbala, Sai; Guigó, Roderic; Han, Yi; Hauser, Frank; Havlak, Paul; Hayden, Luke; Helbing, Sophie; Holder, Michael; Hui, Jerome H. L.; Hunn, Julia P.; Hunnekuhl, Vera S.; Jackson, LaRonda; Javaid, Mehwish; Jhangiani, Shalini N.; Jiggins, Francis M.; Jones, Tamsin E.; Kaiser, Tobias S.; Kalra, Divya; Kenny, Nathan J.; Korchina, Viktoriya; Kovar, Christie L.; Kraus, F. Bernhard; Lapraz, François; Lee, Sandra L.; Lv, Jie; Mandapat, Christigale; Manning, Gerard; Mariotti, Marco; Mata, Robert; Mathew, Tittu; Neumann, Tobias; Newsham, Irene; Ngo, Dinh N.; Ninova, Maria; Okwuonu, Geoffrey; Ongeri, Fiona; Palmer, William J.; Patil, Shobha; Patraquim, Pedro; Pham, Christopher; Pu, Ling-Ling; Putman, Nicholas H.; Rabouille, Catherine; Ramos, Olivia Mendivil; Rhodes, Adelaide C.; Robertson, Helen E.; Robertson, Hugh M.; Ronshaugen, Matthew; Rozas, Julio; Saada, Nehad; Sánchez-Gracia, Alejandro; Scherer, Steven E.; Schurko, Andrew M.; Siggens, Kenneth W.; Simmons, DeNard; Stief, Anna; Stolle, Eckart; Telford, Maximilian J.; Tessmar-Raible, Kristin; Thornton, Rebecca; van der Zee, Maurijn; von Haeseler, Arndt; Williams, James M.; Willis, Judith H.; Wu, Yuanqing; Zou, Xiaoyan; Lawson, Daniel; Muzny, Donna M.; Worley, Kim C.; Gibbs, Richard A.; Akam, Michael; Richards, Stephen

2014-01-01

Myriapods (e.g., centipedes and millipedes) display a simple homonomous body plan relative to other arthropods. All members of the class are terrestrial, but they attained terrestriality independently of insects. Myriapoda is the only arthropod class not represented by a sequenced genome. We present an analysis of the genome of the centipede Strigamia maritima. It retains a compact genome that has undergone less gene loss and shuffling than previously sequenced arthropods, and many orthologues of genes conserved from the bilaterian ancestor that have been lost in insects. Our analysis locates many genes in conserved macro-synteny contexts, and many small-scale examples of gene clustering. We describe several examples where S. maritima shows different solutions from insects to similar problems. The insect olfactory receptor gene family is absent from S. maritima, and olfaction in air is likely effected by expansion of other receptor gene families. For some genes S. maritima has evolved paralogues to generate coding sequence diversity, where insects use alternate splicing. This is most striking for the Dscam gene, which in Drosophila generates more than 100,000 alternate splice forms, but in S. maritima is encoded by over 100 paralogues. We see an intriguing linkage between the absence of any known photosensory proteins in a blind organism and the additional absence of canonical circadian clock genes. The phylogenetic position of myriapods allows us to identify where in arthropod phylogeny several particular molecular mechanisms and traits emerged. For example, we conclude that juvenile hormone signalling evolved with the emergence of the exoskeleton in the arthropods and that RR-1 containing cuticle proteins evolved in the lineage leading to Mandibulata. We also identify when various gene expansions and losses occurred. The genome of S. maritima offers us a unique glimpse into the ancestral arthropod genome, while also displaying many adaptations to its specific life history. PMID:25423365

Predicting the occurrence of cave-inhabiting fauna based on features of the earth surface environment

USGS Publications Warehouse

Christman, Mary C.; Doctor, Daniel H.; Niemiller, Matthew L.; Weary, David J.; Young, John A.; Zigler, Kirk S.; Culver, David C.

2016-01-01

One of the most challenging fauna to study in situ is the obligate cave fauna because of the difficulty of sampling. Cave-limited species display patchy and restricted distributions, but it is often unclear whether the observed distribution is a sampling artifact or a true restriction in range. Further, the drivers of the distribution could be local environmental conditions, such as cave humidity, or they could be associated with surface features that are surrogates for cave conditions. If surface features can be used to predict the distribution of important cave taxa, then conservation management is more easily obtained. We examined the hypothesis that the presence of major faunal groups of cave obligate species could be predicted based on features of the earth surface. Georeferenced records of cave obligate amphipods, crayfish, fish, isopods, beetles, millipedes, pseudoscorpions, spiders, and springtails within the area of Appalachian Landscape Conservation Cooperative in the eastern United States (Illinois to Virginia and New York to Alabama) were assigned to 20 x 20 km grid cells. Habitat suitability for these faunal groups was modeled using logistic regression with twenty predictor variables within each grid cell, such as percent karst, soil features, temperature, precipitation, and elevation. Models successfully predicted the presence of a group greater than 65% of the time (mean = 88%) for the presence of single grid cell endemics, and for all faunal groups except pseudoscorpions. The most common predictor variables were latitude, percent karst, and the standard deviation of the Topographic Position Index (TPI), a measure of landscape rugosity within each grid cell. The overall success of these models points to a number of important connections between the surface and cave environments, and some of these, especially soil features and topographic variability, suggest new research directions. These models should prove to be useful tools in predicting the presence of species in understudied areas.

Cholinesterase-inhibitory effect and in silico analysis of alkaloids from bulbs of Hieronymiella species.

PubMed

Ortiz, Javier E; Garro, Adriana; Pigni, Natalia B; Agüero, María Belén; Roitman, German; Slanis, Alberto; Enriz, Ricardo D; Feresin, Gabriela E; Bastida, Jaume; Tapia, Alejandro

2018-01-15

In Argentina, the Amaryllidaceae family (59 species) comprises a wide variety of genera, only a few species have been investigated as a potential source of cholinesterases inhibitors to treat Alzheimer disease (AD). To study the acetylcholinesterase (AChE) and butyrylcholinesterase (BChE) inhibitory activities of the basic dichloromethane extracts (E) from Hieronymiella aurea, H. caletensis, H. clidanthoides, H. marginata, and H. speciosa species, as well as the isolated compounds from these plant extracts. AChE and BChE inhibitory activities were evaluated with the Ellman's spectrophotometric method. The alkaloids composition from the E was obtained by gas chromatography-mass spectrometry (GC-MS). The E were successively chromatographed on a silica gel column and permeated on Sephadex LH-20 column to afford the main alkaloids identified by means of spectroscopic data. Additionally, an in silico study was carried out. Nine known alkaloids were isolated from the E of five Hieronymiella species. Galanthamine was identified in all the species by GC-MS standing out H. caletensis with a relative abundance of 9.79% of the total ion current. Strong AChE (IC 50  = 1.84 - 15.40 µg/ml) and moderate BChE (IC50 = 23.74 - 136.40 µg/ml) inhibitory activities were displayed by the extracts. Among the isolated alkaloids, only sanguinine and chlidanthine (galanthamine-type alkaloids) demonstrated inhibitory activity toward both enzymes. The QTAIM study suggests that sanguinine has the strongest affinity towards AChE, attributed to an additional interaction with Ser200 as well as stronger molecular interactions Glu199 and His440.These results allowed us to differentiate the molecular behavior in the active site among alkaloids possessing different in vitro inhibitory activities. Hieronymiella species growing in Argentina represent a rich and widespread source of galanthamine and others AChE and BChE inhibitors alkaloids. Additionally, the new trend towards the use of natural extracts as pharmaceuticals rather than pure drugs opens a pathway for the development of a phytomedicine derived from extracts of Hieronymiella spp. Copyright © 2017 Elsevier GmbH. All rights reserved.

Subdivision of arthropod cap-n-collar expression domains is restricted to Mandibulata

PubMed Central

2014-01-01

Background The monophyly of Mandibulata - the division of arthropods uniting pancrustaceans and myriapods - is consistent with several morphological characters, such as the presence of sensory appendages called antennae and the eponymous biting appendage, the mandible. Functional studies have demonstrated that the patterning of the mandible requires the activity of the Hox gene Deformed and the transcription factor cap-n-collar (cnc) in at least two holometabolous insects: the fruit fly Drosophila melanogaster and the beetle Tribolium castaneum. Expression patterns of cnc from two non-holometabolous insects and a millipede have suggested conservation of the labral and mandibular domains within Mandibulata. However, the activity of cnc is unknown in crustaceans and chelicerates, precluding understanding of a complete scenario for the evolution of patterning of this appendage within arthropods. To redress these lacunae, here we investigate the gene expression of the ortholog of cnc in Parhyale hawaiensis, a malacostracan crustacean, and two chelicerates: the harvestman Phalangium opilio, and the scorpion Centruroides sculpturatus. Results In the crustacean P. hawaiensis, the segmental expression of Ph-cnc is the same as that reported previously in hexapods and myriapods, with two distinct head domains in the labrum and the mandibular segment. In contrast, Po-cnc and Cs-cnc expression is not enriched in the labrum of either chelicerate, but instead is expressed at comparable levels in all appendages. In further contrast to mandibulate orthologs, the expression domain of Po-cnc posterior to the labrum is not confined within the expression domain of Po-Dfd. Conclusions Expression data from two chelicerate outgroup taxa suggest that the signature two-domain head expression pattern of cnc evolved at the base of Mandibulata. The observation of the archetypal labral and mandibular segment domains in a crustacean exemplar supports the synapomorphic nature of mandibulate cnc expression. The broader expression of Po-cnc with respect to Po-Dfd in chelicerates further suggests that the regulation of cnc by Dfd was also acquired at the base of Mandibulata. To test this hypothesis, future studies examining panarthropod cnc evolution should investigate expression of the cnc ortholog in arthropod outgroups, such as Onychophora and Tardigrada. PMID:24405788

Four new endemic genera of Rubiaceae (Pavetteae) from Madagascar represent multiple radiations into drylands.

PubMed

Block, Petra De; Rakotonasolo, Franck; Ntore, Salvator; Sylvain G Razafimandimbison; Janssens, Steven

2018-01-01

The taxonomic positions and phylogenetic relationships of six Pavetteae species endemic to Madagascar were tested with a phylogenetic study of the Afro-Madagascan representatives of the tribe Pavetteae based on sequence data from six markers rps16 , trnT-F , petD , accD - psa1 , PI and ITS. The six species were resolved into four well-supported and morphologically distinct clades which we here formally recognise at generic level. The new genera are the monospecific Exallosperma and Pseudocoptosperma , each with a single species, and Helictosperma and Tulearia , each with two species. Each genus is characterised by one or more autapomorphies or by a unique combination of plesiomorphic characters. Mostly, the distinguishing characters are found in fruit and seed; Exallosperma differs from all other Pavetteae genera by the fruit consisting of two stony pyrenes, each with a single laterally flattened seed with irregularly distributed ridges on the surface; Helictosperma is unique by its single spherical seed rolled-in on itself in the shape of a giant pill-millipede. Pseudocoptosperma is characterised by the combination of three ovules pendulous from a small placenta and triangular stipules with a strongly developed awn, whereas Tulearia is characterised by robust sericeous flowers, small leaves, uni- or pauciflorous inflorescences and fruits with two pyrenes, each with a single ruminate seed. The four new genera show marked adaptations to the dry habitats in which they grow. They represent multiple radiations into drylands and highlight the importance of the dry forest and scrub vegetation in western, southern and northern Madagascar for plant biodiversity. The description of the four new genera shows that the tribe Pavetteae exhibits the same pattern as many plant groups in Madagascar, which are characterised by a high proportion of endemic genera comprising a single or a few species. In the four new genera, five new species are described and one new combination is made: Exallosperma longiflora De Block; Helictosperma malacophylla (Drake) De Block, Helictosperma poissoniana De Block, Pseudocoptosperma menabense Capuron ex De Block; Tulearia capsaintemariensis De Block and Tulearia splendida De Block.

Seasonal activity of Leptoiulus trilineatus (C.L. Koch, 1847) and Megaphyllum trassylvanicum (Verhoeff, 1897) (Diplopoda: Julida: Julidae)

NASA Astrophysics Data System (ADS)

Bachvarova, Darina; Doichinov, Aleksandar; Abdulova, Rayme

2018-03-01

The article presents the results of a study of the soil surface seasonal activity of two species of julidae, widely spread in the Balkan Peninsula: Leptoiulus trilineatus (C.L. Koch, 1847) and Megaphyllum trassylvanicum (Verhoeff, 1897). The material was collected by means of pitfall traps between May 2007 and May 2009 in natural and urban habitats exposed to varying degrees of anthropogenic pressure. In the study period 1474 specimens of L. trilineatus and 618 specimens of M. transsylvanicum were collected. The impact of the soil and air temperature and humidity on the seasonal activity of both species was measured through statistical analysis. The statistical data processing was conducted using SPSS 9.0 and StatPlus 3.5.3 software packages. L. trilineatus and M. trassylvanicum are polytopic, mesophilic and mesotermic species with year-round activity in the studied area. There is no statistically significant correlation between the degree of anthropogenic impact and the activity of the two species. Leptoiulus trilineatus shows equal preference for both urban and natural habitats in the studied area. The species demonstrates the typical of all millipedes bimodal activity, which is the highest in spring and the beginning of winter - in the periods from March to May and from November to December. The coefficients of correlation dependence of L. trilineatus activity on the tested abiotic environmental factors are not statistically significant. The Pearson-Brave coefficient which measures the effect of soil humidity on species activity is 0.417, which shows a positive correlation. M. trassylvanicum has the highest frequency in urban biotops such as parks in the urban and suburban areas of Shumen and in the coniferous habitats on the Shumen Plateau. In this area the species demonstrates its highest activity in spring and summer (from February to July). The abiotic factors with statistically significant effect on the soil surface activity of M. trassylvanicum are the soil and air temperature - the values of the Pearson-Brave correlation coefficients are 0.708 and 0.586 respectively.

Four new endemic genera of Rubiaceae (Pavetteae) from Madagascar represent multiple radiations into drylands

PubMed Central

Block, Petra De; Rakotonasolo, Franck; Ntore, Salvator; Sylvain G. Razafimandimbison; Janssens, Steven

2018-01-01

Abstract The taxonomic positions and phylogenetic relationships of six Pavetteae species endemic to Madagascar were tested with a phylogenetic study of the Afro-Madagascan representatives of the tribe Pavetteae based on sequence data from six markers rps16, trnT-F, petD, accD-psa1, PI and ITS. The six species were resolved into four well-supported and morphologically distinct clades which we here formally recognise at generic level. The new genera are the monospecific Exallosperma and Pseudocoptosperma, each with a single species, and Helictosperma and Tulearia, each with two species. Each genus is characterised by one or more autapomorphies or by a unique combination of plesiomorphic characters. Mostly, the distinguishing characters are found in fruit and seed; Exallosperma differs from all other Pavetteae genera by the fruit consisting of two stony pyrenes, each with a single laterally flattened seed with irregularly distributed ridges on the surface; Helictosperma is unique by its single spherical seed rolled-in on itself in the shape of a giant pill-millipede. Pseudocoptosperma is characterised by the combination of three ovules pendulous from a small placenta and triangular stipules with a strongly developed awn, whereas Tulearia is characterised by robust sericeous flowers, small leaves, uni- or pauciflorous inflorescences and fruits with two pyrenes, each with a single ruminate seed. The four new genera show marked adaptations to the dry habitats in which they grow. They represent multiple radiations into drylands and highlight the importance of the dry forest and scrub vegetation in western, southern and northern Madagascar for plant biodiversity. The description of the four new genera shows that the tribe Pavetteae exhibits the same pattern as many plant groups in Madagascar, which are characterised by a high proportion of endemic genera comprising a single or a few species. In the four new genera, five new species are described and one new combination is made: Exallosperma longiflora De Block; Helictosperma malacophylla (Drake) De Block, Helictosperma poissoniana De Block, Pseudocoptosperma menabense Capuron ex De Block; Tulearia capsaintemariensis De Block and Tulearia splendida De Block. PMID:29861651

A modular network for legged locomotion

NASA Astrophysics Data System (ADS)

Golubitsky, Martin; Stewart, Ian; Buono, Pietro-Luciano; Collins, J. J.

1998-04-01

In this paper we use symmetry methods to study networks of coupled cells, which are models for central pattern generators (CPGs). In these models the cells obey identical systems of differential equations and the network specifies how cells are coupled. Previously, Collins and Stewart showed that the phase relations of many of the standard gaits of quadrupeds and hexapods can be obtained naturally via Hopf bifurcation in small networks. For example, the networks they used to study quadrupeds all had four cells, with the understanding that each cell determined the phase of the motion of one leg. However, in their work it seemed necessary to employ several different four-oscillator networks to obtain all of the standard quadrupedal gaits. We show that this difficulty with four-oscillator networks is unavoidable, but that the problems can be overcome by using a larger network. Specifically, we show that the standard gaits of a quadruped, including walk, trot and pace, cannot all be realized by a single four-cell network without introducing unwanted conjugacies between trot and pace - conjugacies that imply a dynamic equivalence between these gaits that seems inconsistent with observations. In this sense a single network with four cells cannot model the CPG of a quadruped. We also introduce a single eight-cell network that can model all of the primary gaits of quadrupeds without these unwanted conjugacies. Moreover, this network is modular in that it naturally generalizes to provide models of gaits in hexapods, centipedes, and millipedes. The analysis of models for many-legged animals shows that wave-like motions, similar to those obtained by Kopell and Ermentrout, can be expected. However, our network leads to a prediction that the wavelength of the wave motion will divide twice the length of the animal. Indeed, we reproduce illustrations of wave-like motions in centipedes where the animal is approximately one-and-a-half wavelength long - motions that are consistent with this prediction. We discuss the implications of these results for the development of modular control networks for adaptive legged robots.

Expansion and diversification of the MSDIN family of cyclic peptide genes in the poisonous agarics Amanita phalloides and A. bisporigera

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pulman, Jane A.; Childs, Kevin L.; Sgambelluri, R. Michael

Here, the cyclic peptide toxins of Amanita mushrooms, such as α-amanitin and phalloidin, are encoded by the “MSDIN” gene family and ribosomally biosynthesized. Based on partial genome sequence and PCR analysis, some members of the MSDIN family were previously identified in Amanita bisporigera, and several other members are known from other species of Amanita. However, the complete complement in any one species, and hence the genetic capacity for these fungi to make cyclic peptides, remains unknown. As a result, draft genome sequences of two cyclic peptide-producing mushrooms, the “Death Cap” A. phalloides and the “Destroying Angel” A. bisporigera, were obtained.more » Each species has ~30 MSDIN genes, most of which are predicted to encode unknown cyclic peptides. Some MSDIN genes were duplicated in one or the other species, but only three were common to both species. A gene encoding cycloamanide B, a previously described nontoxic cyclic heptapeptide, was also present in A. phalloides, but genes for antamanide and cycloamanides A, C, and D were not. In A. bisporigera, RNA expression was observed for 20 of the MSDIN family members. Based on their predicted sequences, novel cyclic peptides were searched for by LC/MS/MS in extracts of A. phalloides. The presence of two cyclic peptides, named cycloamanides E and F with structures cyclo(SFFFPVP) and cyclo(IVGILGLP), was thereby demonstrated. Of the MSDIN genes reported earlier from another specimen of A. bisporigera, 9 of 14 were not found in the current genome assembly. Differences between previous and current results for the complement of MSDIN genes and cyclic peptides in the two fungi probably represents natural variation among geographically dispersed isolates of A. phalloides and among the members of the poorly defined A. bisporigera species complex. Both A. phalloides and A. bisporigera contain two prolyl oligopeptidase genes, one of which (POPB) is probably dedicated to cyclic peptide biosynthesis as it is in Galerina marginata. Finally, the MSDIN gene family has expanded and diverged rapidly in Amanita section Phalloideae. Together, A. bisporigera and A. phalloides are predicted to have the capacity to make more than 50 cyclic hexa-, hepta-,octa-, nona- and decapeptides.« less

Living and dead foraminiferal assemblages from an active submarine canyon and surrounding sectors: the Gioia Canyon system (Tyrrhenian Sea, Southern Italy)

NASA Astrophysics Data System (ADS)

Letizia, Di Bella; Martina, Pierdomenico; Roberta, Porretta; Chiocci, Francesco Latino; Eleonora, Martorelli

2017-05-01

Living (rose Bengal stained) and dead benthic foraminiferal assemblages were studied from 23 stations located between 60 and 670 m depth along the Gioia Canyon and the adjacent continental shelf and slope (Southern Tyrrhenian Sea). The aim of this study is to investigate the relationships among sedimentary processes, hydrological patterns and benthic foraminiferal distribution, in a highly dynamic environment. High sedimentation rates on the shelf and occasional turbidity flows along the canyon, lead to unstable environmental conditions at the seafloor that reflect on the microbenthic community influencing faunal density, diversity, species composition and distribution inside the sediment. The foraminiferal distribution seems to be controlled by sedimentary processes, nutrient supply and organic matter recycling, which in turn are strongly controlled by the seasonal variability of riverine inputs and current dynamics in the Gulf of Gioia. From the inner shelf to the upper continental slope (550 m depth), the living foraminiferal assemblage is dominated by agglutinated taxa, likely favored by the high terrigenous supply. Frequent eutrophic taxa (Valvulineria bradyana and Nonionella turgida) tolerant high turbidity (Leptohalysis scottii,) and low oxygen (Bolivina spp. and Bulimina spp.) are recorded on the edge of the inner shelf, where channeling, deposition of coastal deposits and occasional sediment gravity flows occur. In the outer sector of the shelf a turnover of species is observed; L. scottii replaced by the opportunistic species Reophax scorpiurus, and taxa indicative of high energy conditions (Cassidulina spp.) become dominant in association with mesotrophic species like Globocassidulina subglobosa. Along the continental slope, lower sedimentation rates and more stable environmental conditions support richer and more diversified foraminiferal assemblage. The abundance of Bulimina marginata indicates eutrophic conditions at the shallower station (300 m depth) whereas at greater depth (550 m) typical open slope species dominate (Gyroidina spp., Uvigerina mediterranea). Within the Gioia Canyon, benthic assemblage indicates environmental conditions similar to those observed in other Mediterranean and extra-Mediterranean canyons. The assemblage is characterized by eutrophic and low oxygen taxa (Bolivina spp., Bulimina spp.) in relation to periodical fluxes of sediment and organic matter. Similar relationships arise from the analysis of dead foraminiferal assemblages. However, the comparison between living and dead faunas highlight compositional and structural changes related to taphonomic processes.

Physiological ecology of overwintering in the hatchling painted turtle: multiple-scale variation in response to environmental stress.

PubMed

Costanzo, Jon P; Dinkelacker, Stephen A; Iverson, John B; Lee, Richard E

2004-01-01

We integrated field and laboratory studies in an investigation of water balance, energy use, and mechanisms of cold-hardiness in hatchling painted turtles (Chrysemys picta) indigenous to west-central Nebraska (Chrysemys picta bellii) and northern Indiana (Chrysemys picta marginata) during the winters of 1999-2000 and 2000-2001. We examined 184 nests, 80 of which provided the hatchlings (n=580) and/or samples of soil used in laboratory analyses. Whereas winter 1999-2000 was relatively dry and mild, the following winter was wet and cold; serendipitously, the contrast illuminated a marked plasticity in physiological response to environmental stress. Physiological and cold-hardiness responses of turtles also varied between study locales, largely owing to differences in precipitation and edaphics and the lower prevailing and minimum nest temperatures (to -13.2 degrees C) encountered by Nebraska turtles. In Nebraska, winter mortality occurred within 12.5% (1999-2000) and 42.3% (2000-2001) of the sampled nests; no turtles died in the Indiana nests. Laboratory studies of the mechanisms of cold-hardiness used by hatchling C. picta showed that resistance to inoculative freezing and capacity for freeze tolerance increased as winter approached. However, the level of inoculation resistance strongly depended on the physical characteristics of nest soil, as well as its moisture content, which varied seasonally. Risk of inoculative freezing (and mortality) was greatest in midwinter when nest temperatures were lowest and soil moisture and activity of constituent organic ice nuclei were highest. Water balance in overwintering hatchlings was closely linked to dynamics of precipitation and soil moisture, whereas energy use and the size of the energy reserve available to hatchlings in spring depended on the winter thermal regime. Acute chilling resulted in hyperglycemia and hyperlactemia, which persisted throughout winter; this response may be cryoprotective. Some physiological characteristics and cold-hardiness attributes varied between years, between study sites, among nests at the same site, and among siblings sharing nests. Such variation may reflect adaptive phenotypic plasticity, maternal or paternal influence on an individual's response to environmental challenge, or a combination of these factors. Some evidence suggests that life-history traits, such as clutch size and body size, have been shaped by constraints imposed by the harsh winter environment.

Ants farm subterranean aphids mostly in single clone groups - an example of prudent husbandry for carbohydrates and proteins?

PubMed Central

2012-01-01

Background Mutualistic interactions are wide-spread but the mechanisms underlying their evolutionary stability and ecological dynamics remain poorly understood. Cultivation mutualisms in which hosts consume symbionts occur in phylogenetically diverse groups, but often have symbiont monocultures for each host. This is consistent with the prediction that symbionts should avoid coexistence with other strains so that host services continue to benefit relatives, but it is less clear whether hosts should always favor monocultures and what mechanisms they might have to manipulate symbiont diversity. Few mutualisms have been studied in sufficient genetic detail to address these issues, so we decided to characterize symbiont diversity in the complex mutualism between multiple root aphid species and Lasius flavus ants. After showing elsewhere that three of these aphid species have low dispersal and mostly if not exclusively asexual reproduction, we here investigate aphid diversity within and between ant nest mounds. Results The three focal species (Geoica utricularia, Forda marginata and Tetraneura ulmi) had considerable clonal diversity at the population level. Yet more than half of the ant mounds contained just a single aphid species, a significantly higher percentage than expected from a random distribution. Over 60% of these single-species mounds had a single aphid clone, and clones tended to persist across subsequent years. Whenever multiple species/clones co-occurred in the same mound, they were spatially separated with more than 95% of the aphid chambers containing individuals of a single clone. Conclusions L. flavus “husbandry” is characterized by low aphid “livestock” diversity per colony, especially at the nest-chamber level, but it lacks the exclusive monocultures known from other cultivation mutualisms. The ants appear to eat most of the early instar aphids, so that adult aphids are unlikely to face limited phloem resources and scramble competition with other aphids. We suggest that such culling of carbohydrate-providing symbionts for protein ingestion may maintain maximal host yield per aphid while also benefitting the domesticated aphids as long as their clone-mates reproduce successfully. The cost-benefit logic of this type of polyculture husbandry has striking analogies with human farming practices based on slaughtering young animals for meat to maximize milk-production by a carefully regulated adult livestock population. PMID:22747564

Expansion and diversification of the MSDIN family of cyclic peptide genes in the poisonous agarics Amanita phalloides and A. bisporigera

DOE PAGES

Pulman, Jane A.; Childs, Kevin L.; Sgambelluri, R. Michael; ...

2016-12-15

Here, the cyclic peptide toxins of Amanita mushrooms, such as α-amanitin and phalloidin, are encoded by the “MSDIN” gene family and ribosomally biosynthesized. Based on partial genome sequence and PCR analysis, some members of the MSDIN family were previously identified in Amanita bisporigera, and several other members are known from other species of Amanita. However, the complete complement in any one species, and hence the genetic capacity for these fungi to make cyclic peptides, remains unknown. As a result, draft genome sequences of two cyclic peptide-producing mushrooms, the “Death Cap” A. phalloides and the “Destroying Angel” A. bisporigera, were obtained.more » Each species has ~30 MSDIN genes, most of which are predicted to encode unknown cyclic peptides. Some MSDIN genes were duplicated in one or the other species, but only three were common to both species. A gene encoding cycloamanide B, a previously described nontoxic cyclic heptapeptide, was also present in A. phalloides, but genes for antamanide and cycloamanides A, C, and D were not. In A. bisporigera, RNA expression was observed for 20 of the MSDIN family members. Based on their predicted sequences, novel cyclic peptides were searched for by LC/MS/MS in extracts of A. phalloides. The presence of two cyclic peptides, named cycloamanides E and F with structures cyclo(SFFFPVP) and cyclo(IVGILGLP), was thereby demonstrated. Of the MSDIN genes reported earlier from another specimen of A. bisporigera, 9 of 14 were not found in the current genome assembly. Differences between previous and current results for the complement of MSDIN genes and cyclic peptides in the two fungi probably represents natural variation among geographically dispersed isolates of A. phalloides and among the members of the poorly defined A. bisporigera species complex. Both A. phalloides and A. bisporigera contain two prolyl oligopeptidase genes, one of which (POPB) is probably dedicated to cyclic peptide biosynthesis as it is in Galerina marginata. Finally, the MSDIN gene family has expanded and diverged rapidly in Amanita section Phalloideae. Together, A. bisporigera and A. phalloides are predicted to have the capacity to make more than 50 cyclic hexa-, hepta-,octa-, nona- and decapeptides.« less

Foraminifera eco-biostratigraphy of the southern Evoikos outer shelf, central Aegean Sea, during MIS 5 to present

NASA Astrophysics Data System (ADS)

Drinia, Hara; Antonarakou, Assimina; Tsourou, Theodora; Kontakiotis, George; Psychogiou, Maria; Anastasakis, George

2016-09-01

The South Evoikos Basin is a marginal basin in the Aegean Sea which receives little terrigenous supply and its sedimentation is dominated by hemipelagic processes. Late Quaternary benthic and planktonic foraminifera from core PAG-155 are investigated in order to understand their response to the glacial-interglacial cycles in this region. The quantitative analysis of planktonic foraminifera, coupled with accelerator mass spectrometry (14C-AMS) radiocarbon date measurements, provide an integrated chrono-stratigraphic time framework over the last 90 ka (time interval between late Marine Isotopic Stages 5 and 1; MIS5-MIS1). The temporary appearance and disappearance as well as several abundance peaks in the quantitative distribution of selected climate-sensitive planktonic species allowed the identification of several eco-bioevents, useful to accurately mark the boundaries of the eco-biozones widely recognized in the Mediterranean records and used for large-scale correlations. The established bio-ecozonation scheme allows a detailed palaecological reconstruction for the late Pleistocene archive in the central Aegean, and furthermore provides a notable contribution for palaeoclimatic studies, facilitating intercorrelations between various oceanographic basins. The quantitative analyses of benthic foraminifera identify four distinct assemblages, namely Biofacies: Elphidium spp., Haynesina spp. Biofacies, characterized by neritic species, dominated during the transition from MIS 5 to MIS 4; Cassidulina laevigata/carinata Biofacies dominated till 42 ka (transgressive trend from MIS 4 to MIS 3); Bulimina gibba Biofacies dominated from 42 ka to 9.5 ka (extensive regression MIS 3,2 through lowstand and early transgression; beginning of MIS 1); Bulimina marginata, Uvigerina spp. Biofacies dominated from 9.5 ka to the present (late transgression through early highstand; MIS 1)., This study showed that the South Evoikos Basin which is characterized by its critical depths and connections to the open sea, and its small volume water masses that nourished foraminiferal assemblages, accurately records 5th-4th order sea level and climatic fluctuations. Especially, the basin's limited communication with the open ocean implies that any climatic signals will be recorded in an amplified fashion, and therefore this heightened sensitivity to the effects of climate variability further underlies the prominent role of such marginal basins in the understanding of the global climatic evolution.

Why be red listed? Threatened Myriapoda species in Brazil with implications for their conservation.

PubMed

Karam-Gemael, Manoela; Izzo, Thiago Junqueira; Chagas, Amazonas

2018-01-01

The biodiversity crisis we live in, marked by high extinction rates, requires well-planned conservation efforts. To overcome this issue, red lists of threatened species are recognized as the main objective approach for evaluating the conservation status of species and therefore guiding conservation priorities. This work focuses on the Myriapoda (Chilopoda and Diplopoda) species listed in the Brazilian red list of fauna to enable discussion of the practical implications of red lists for conservation. Almost all myriapods assessed are endemic to Brazil (99 %) and 73 % are known from subterranean habitats only. Despite of 33 % being recorded from protected areas (PAs), downgrading, degazettement or downsizing of PAs and intense and unregulated ecotourism represent great threats. The PAs network in Brazil tends to fail in conserving myriapod species. The number of data deficient species (42 %) states the need of investing in ecological and taxonomic studies about the group, in order to fill in important knowledge gaps in species assessments nationally and globally. In this work we show that there is a lack of communication between national and global agencies concerning red lists, which results in a significant loss for science and for conservation. Despite investing in national and state red lists, individual countries must take the final step of submitting its data to IUCN global database, as significant international funding is available for IUCN red listed species conservation. Being one of the most diverse countries in the world, and facing the biggest cuts ever on national science funding, losing these important funding opportunities is a huge loss for Brazilian biodiversity conservation and for science. This study raises awareness on subterranean habitats conservation, due to its high endemism and fragility. Since the first edition of the Brazilian Red List in 1968, centipedes are now included for the first time, and millipedes for the second time. The presence of these myriapods in the list brings attention to the group, which usually receives little or no attention in conservation programs and environmental impact assessments. Rather than a specific case for Myriapoda and for Brazil, the points discussed here can be related to arthropods and the tropics, as the most biodiverse countries are emerging economies facing similar challenges in PAs network management, species extinction risks and science funding.

Why be red listed? Threatened Myriapoda species in Brazil with implications for their conservation

PubMed Central

Karam-Gemael, Manoela; Izzo, Thiago Junqueira; Chagas-Jr, Amazonas

2018-01-01

Abstract The biodiversity crisis we live in, marked by high extinction rates, requires well-planned conservation efforts. To overcome this issue, red lists of threatened species are recognized as the main objective approach for evaluating the conservation status of species and therefore guiding conservation priorities. This work focuses on the Myriapoda (Chilopoda and Diplopoda) species listed in the Brazilian red list of fauna to enable discussion of the practical implications of red lists for conservation. Almost all myriapods assessed are endemic to Brazil (99 %) and 73 % are known from subterranean habitats only. Despite of 33 % being recorded from protected areas (PAs), downgrading, degazettement or downsizing of PAs and intense and unregulated ecotourism represent great threats. The PAs network in Brazil tends to fail in conserving myriapod species. The number of data deficient species (42 %) states the need of investing in ecological and taxonomic studies about the group, in order to fill in important knowledge gaps in species assessments nationally and globally. In this work we show that there is a lack of communication between national and global agencies concerning red lists, which results in a significant loss for science and for conservation. Despite investing in national and state red lists, individual countries must take the final step of submitting its data to IUCN global database, as significant international funding is available for IUCN red listed species conservation. Being one of the most diverse countries in the world, and facing the biggest cuts ever on national science funding, losing these important funding opportunities is a huge loss for Brazilian biodiversity conservation and for science. This study raises awareness on subterranean habitats conservation, due to its high endemism and fragility. Since the first edition of the Brazilian Red List in 1968, centipedes are now included for the first time, and millipedes for the second time. The presence of these myriapods in the list brings attention to the group, which usually receives little or no attention in conservation programs and environmental impact assessments. Rather than a specific case for Myriapoda and for Brazil, the points discussed here can be related to arthropods and the tropics, as the most biodiverse countries are emerging economies facing similar challenges in PAs network management, species extinction risks and science funding. PMID:29706779

The fine structure of the eyes of some bristly millipedes (Penicillata, Diplopoda): additional support for the homology of mandibulate ommatidia.

PubMed

Müller, Carsten H G; Sombke, Andy; Rosenberg, Jörg

2007-12-01

The eyes of adult Phryssonotus platycephalus (Synxenidae) and Polyxenus lagurus (Polyxenidae) were investigated by light and electron microscopy. At each side of the head, various numbers of eye cups are situated on projections, the eye hills. The eye cups of P. platycephalus and P. lagurus are similarly structured and considered homologous sense organs. Each corneal lens is biconvex and formed by four to six pigmented corneagenous cells with their nuclei displaced towards the mid-periphery of the eye cup. The corneal surface displays a conspicuous nanostructure of fingerprint-like ridges in P. platycephalus. However, the corneal surface appears smooth in P. lagurus. In P. platycephalus. A rudimentary crystalline cone is observed in each eye cup, always produced by a constant number of three eucone cells. The crystalline cone is wedged between the corneal lens and the distal rhabdom and consists of three distinct compartments. Each cone compartment is connected to the voluminous proximal nuclear region by one elongated cytoplasmic process, which runs through the infraretinular space. A dual type retinula is always arranged in two distinct horizontal cell layers. The distal retinula contains an unfixed number of four to five cells in P. lagurus, whereas it contains five to eight cells in P. platycephalus. The distal retinula cells form a large and fused axial rhabdom. A constant number of three proximal retinula cells give rise to a small axial rhabdom, which looks more or less triangular in cross sections. The basal matrix is rather thin, inconspicuous and lines the bases of the eye cups. The ultrastructure of the eye cups of P. platycephalus resembles that observed in the ommatidia of the centipede Scutigera coleoptrata. The present study lends additional support to the homology of mandibulate ommatidia, because of the common possession of crystalline cone cells and a bilayered dual type retinula in the eye cups of P. platycephalus. Ommatidia or unicorneal eyes that include eucone cells with nuclei displaced outside the cone compartments, as found in Scutigeromorpha and Penicillata, might also be interpreted as an additional autapomorphy of the Myriapoda. The suggested homology of scutigeromorph and penicillate eyes implies that penicillate eye cups have to be considered modified, probably miniaturized ommatidia.

Metal contamination in wildlife living near two zinc smelters

USGS Publications Warehouse

Beyer, W.N.; Pattee, O.H.; Sileo, L.; Hoffman, D.J.; Mulhern, B.M.

1985-01-01

Wildlife in an oak forest on Blue Mountain was studied 10 km upwind (Bake Oven Knob site) and 2 km downwind (Palmerton site) of two zinc smelters in eastern Pennsylvania, USA. Previous studies at sites near these smelters had shown changes in populations of soil microflora, lichens, green plants and litter-inhabiting arthropods. The 02 soil litter horizon at Palmerton was heavily contaminated with Pb (2700 mg kg-1), Zn (24000 mg kg-1), and Cd (710 mg kg-1), and to a lesser extent with Cu (440 mg kg-1). Various kinds of invertebrates (earthworms, slugs and millipedes) that feed on soil litter or soil organic matter were rare at, or absent from, the Palmerton site. Those collected at Bake Oven Knob tended to have much higher concentrations of metals than did other invertebrates. Frogs, toads and salamanders were very rare at, or absent from, the Palmerton site, but were present at Bake Oven Knob and at other sites on Blue Mountain farther from the smelters. Metal concentrations (dry wt) in different organisms from Palmerton were compared. Concentrations of Pb were highest in shrews (110 mg kg-1), followed by songbirds (56 mg kg-1), leaves (21 mg kg-1), mice (17 mg kg-1), carrion insects (14 mg kg-1), berries (4.0 mg kg-1), moths (4,3 mg kg-1) and fungi (3.7 mg kg-1). Concentrations of Cd, in contrast, were highest in carrion insects (25 mg kg-1 ),followed by fungi (9.8 mg kg-1), leaves (8.1 mg kg-1), shrews (7.3 mg kg-I), moths (4.9 mg kg-1), mice (2.6 mg kg -1), songbirds (2.5 mg kg -1) and berries (1.2 mg kg-1). Concentrations of Zn and Cu tended to be highest in the same organisms that had the highest concentrations of Cd. Only a small proportion of the metals in the soil became incorporated into plant foliage, and much of the metal contamination detected in the biota probably came from aerial deposition. The mice from both sites seemed to be healthy. Shrews had higher concentrations of metals than did mice, and one shrew showed evidence of Pb poisoning; its red blood cell ALAD activity was greatly reduced, one kidney contained acid-fast intranuclear inclusion bodies, and the other kidney had 280 mg kg-1 Pb (wet wt). The livers from two cuckoos from Palmerton had elevated Pb concentrations (18 and 25 mg kg-1, wet wt). Most of the songbirds seemed to be healthy.

Benthic foraminifera as tools in interpretation of subsurface hydrocarbon fluid flow at Veslemøy High and Hola-Vesterålen areas of the Barents Sea.

NASA Astrophysics Data System (ADS)

Baranwal, Soma; Sauer, Simone; Knies, Jochen; Chand, Shyam; Jensen, Henning; Klug, Martin

2014-05-01

Relatively few studies have focused on high-latitude benthic foraminifera related to hydrocarbon seeps. In this study, we present micropaleontological data from 8 gravity cores from the Veslemøy High and 4 surface sediments (0-1cm) from Hola-Vesterålen, Norway. The study of hydrocarbon impregnation and its effect on benthic foraminfera was conducted on selected sediment samples from the calcium-rich Holocene sediments of the Veslemøy High. The assemblage of foraminifera have been identified from three regional clusters. Cluster I and II are dominated by benthic foraminifera Buccella, Cassidulina, Cibicides, Discopulvinulina, Epistominella, Pullenia and Trifarina. Cluster III is distinct with an elevated abundance of Cassidulina, Cibicides and Trifarina with significant (>5 %) occurrence of Nonionella and Uvigerina. There is no apparent dissolution on the preserved foraminifera. However, there can be differential dissolution or destruction of the more fragile (thinner-walled test) species like Epistominella, Nonionella or Pullenia while leaving behind over-represented species like Cibicides or Trifarina (both preferring coarse grained, high energy areas that can withstand permanent winnowing and redeposition) with higher preservation potential. Also, Cluster III is placed right over the underlying fault line with shallow seep-indications and thus the fluids released may have induced the dissolution of the fragile species. Moreover, the significant occurrence of benthic foraminifera Nonionella auris, and Uvigerina peregrina, in Holocene deposits of Cluster III may be indicative of environments influenced by hydrocarbon migration to the seafloor. Previous studies have reported active natural hydrocarbon seepage in the Hola area and the stable carbon and hydrogen isotopic composition of methane in the sediments suggests a predominantly thermogenic methane source. The seep-assemblage is composed of Cibicides (~60%), Cassidulina, Discanomalina, Textularia and Trifarina. Discanomalina coronata is an indicator species to identify active cold-water coral mounds. A negative carbon isotopic signal is recorded by D. coronata in all samples. Seep samples with low diversities also contain deformed individuals of Cibicides lobatulus (3.4-6.5 %), similar to those reported for a gigantic oil spill from a tanker or for environments polluted with heavy metals. However, it is an attached form and thus its test shape is affected by the nature of the substratum. Carbon isotopic signature of the deformed specimens reveal slightly lower values than their undeformed counterparts. One sample from Ullsfjorden was also studied where the assemblage is represented by Bulimina, Cassidulina, Globobulimina, Melonis, Nonionella and Reophax. Infaunal fauna B. marginata, M. barleeanum, and N. labradorica prefer muddy/silty to sandy substrata and high organic matter input, and thrive under suboxic-dysoxic conditions. All species in this assemblage have recorded negative carbon isotopic signal.

Contribution of soil fauna to soil functioning in degraded environments: a multidisciplinary approach

NASA Astrophysics Data System (ADS)

Gargiulo, Laura; Mele, Giacomo; Moradi, Jabbar; Kukla, Jaroslav; Jandová, Kateřina; Frouz, Jan

2016-04-01

The restoration of the soil functions is essential for the recovery of highly degraded sites and, consequently, the study of the soil fauna role in the soil development in such environments has great potential from a practical point of view. The soils of the post-mining sites represent unique models for the study of the natural ecological succession because mining creates similar environments characterized by the same substrate, but by different ages according to the year of closure of mines. The aim of this work was to assess the contribution of different species of macrofauna on the evolution of soil structure and on the composition and activity of the microbial community in soil samples subjected to ecological restoration or characterized by spontaneous ecological succession. For this purpose, an experimental test was carried out in two sites characterized by different post-mining conditions: 1) natural succession, 2) reclamation with planting trees. These sites are located in the post-mining area of Sokolov (Czech Republic). For the experimental test repacked soil cores were prepared in laboratory with sieved soil sampled from the two sites. The soil cores were prepared maintaining the sequence of soil horizons present in the field. These samples were inoculated separately with two genera of earthworms (Lumbricus and Aporrectodea) and two of centipedes (Julida and Polydesmus). In particular, based on their body size, were inoculated for each cylinder 2 individuals of millipedes, 1 individual of Lumbricus and 4 individuals of Aporrectodea. For each treatment and for control samples 5 replicates were prepared and all samples were incubated in field for 1 month in the two original sampling sites. After the incubation the samples were removed from the field and transported in laboratory in order to perform the analysis of microbial respiration, of PLFA (phospholipid-derived fatty acids) and ergosterol contents and finally for the characterization of soil structure. All replicates were subjected to soil respiration measurement by means of chemical titration method. Then some replicates were destructively analyzed for PLFA and ergosterol and others were used for the 3D soil image analysis of the soil pore system. The soil cores were imaged using X-ray microtomography and three-dimensional image processing was performed in order to obtain 3D reconstructions and preliminary analysis of the identified biopores. The experimental approach used in this multidisciplinary study showed a promising potential to provide new useful information about the widely differentiated contribution of many types of macrofauna to the formation of the soil pore system and to the development of the soil microbial functions in different types of environments.

Neurogenesis in the water flea Daphnia magna (Crustacea, Branchiopoda) suggests different mechanisms of neuroblast formation in insects and crustaceans.

PubMed

Ungerer, Petra; Eriksson, Bo Joakim; Stollewerk, Angelika

2011-09-01

Within euarthropods, the morphological and molecular mechanisms of early nervous system development have been analysed in insects and several representatives of chelicerates and myriapods, while data on crustaceans are fragmentary. Neural stem cells (neuroblasts) generate the nervous system in insects and in higher crustaceans (malacostracans); in the remaining euarthropod groups, the chelicerates (e.g. spiders) and myriapods (e.g. millipedes), neuroblasts are missing. In the latter taxa, groups of neural precursors segregate from the neuroectoderm and directly differentiate into neurons and glial cells. In all euarthropod groups, achaete-scute homologues are required for neuroblast/neural precursor group formation. In the insects Drosophila melanogaster and Tribolium castaneum achaete-scute homologues are initially expressed in clusters of cells (proneural clusters) in the neuroepithelium but expression becomes restricted to the future neuroblast. Subsequently genes such as snail and prospero are expressed in the neuroblasts which are required for asymmetric division and differentiation. In contrast to insects, malacostracan neuroblasts do not segregate into the embryo but remain in the outer neuroepithelium, similar to vertebrate neural stem cells. It has been suggested that neuroblasts are present in another crustacean group, the branchiopods, and that they also remain in the neuroepithelium. This raises the questions how the molecular mechanisms of neuroblast selection have been modified during crustacean and insect evolution and if the segregation or the maintenance of neuroblasts in the neuroepithelium represents the ancestral state. Here we take advantage of the recently published Daphnia pulex (branchiopod) genome and identify genes in Daphnia magna that are known to be required for the selection and asymmetric division of neuroblasts in the fruit fly D. melanogaster. We unambiguously identify neuroblasts in D. magna by molecular marker gene expression and division pattern. We show for the first time that branchiopod neuroblasts divide in the same pattern as insect and malacostracan neuroblasts. Furthermore, in contrast to D. melanogaster, neuroblasts are not selected from proneural clusters in the branchiopod. Snail rather than ASH is the first gene to be expressed in the nascent neuroblasts suggesting that ASH is not required for the selection of neuroblasts as in D. melanogaster. The prolonged expression of ASH in D. magna furthermore suggests that it is involved in the maintenance of the neuroblasts in the neuroepithelium. Based on these and additional data from various representatives of arthropods we conclude that the selection of neural precursors from proneural clusters as well as the segregation of neural precursors represents the ancestral state of neurogenesis in arthropods. We discuss that the derived characters of malacostracans and branchiopods - the absence of neuroblast segregation and proneural clusters - might be used to support or reject the possible groupings of paraphyletic crustaceans. Copyright © 2011 Elsevier Inc. All rights reserved.

Impact of ecosystem management on microbial community level physiological profiles of postmining forest rehabilitation.

PubMed

Cookson, W R; O'Donnell, A J; Grant, C D; Grierson, P F; Murphy, D V

2008-02-01

We investigated the impacts of forest thinning, prescribed fire, and contour ripping on community level physiological profiles (CLPP) of the soil microbial population in postmining forest rehabilitation. We hypothesized that these management practices would affect CLPP via an influence on the quality and quantity of soil organic matter. The study site was an area of Jarrah (Eucalyptus marginata Donn ex Sm.) forest rehabilitation that had been mined for bauxite 12 years previously. Three replicate plots (20 x 20 m) were established in nontreated forest and in forest thinned from 3,000-8,000 stems ha(-1) to 600-800 stems ha(-1) in April (autumn) of 2003, followed either by a prescribed fire in September (spring) of 2003 or left nonburned. Soil samples were collected in August 2004 from two soil depths (0-5 cm and 5-10 cm) and from within mounds and furrows caused by postmining contour ripping. CLPP were not affected by prescribed fire, although the soil pH and organic carbon (C), total C and total nitrogen (N) contents were greater in burned compared with nonburned plots, and the coarse and fine litter mass lower. However, CLPP were affected by forest thinning, as were fine litter mass, soil C/N ratio, and soil pH, which were all higher in thinned than nonthinned plots. Furrow soil had greater coarse and fine litter mass, and inorganic phosphorous (P), organic P, organic C, total C, total N, ammonium, microbial biomass C contents, but lower soil pH and soil C/N ratio than mound soil. Soil pH, inorganic P, organic P, organic C, total C and N, ammonium, and microbial biomass C contents also decreased with depth, whereas soil C/N ratio increased. Differences in CLPP were largely (94%) associated with the relative utilization of gluconic, malic (greater in nonthinned than thinned soil and mound than furrow soil), L-tartaric, succinic, and uric acids (greater in thinned than nonthinned, mound than furrow, and 5-10 cm than 0-5 cm soil). The relative utilization of amino acids also tended to increase with increasing soil total C and organic C contents but decreased with increasing nitrate content, whereas the opposite was true for carboxylic acids. Only 45% of the variance in CLPP was explained using a multivariate multiple regression model, but soil C and N pools and litter mass were significant predictors of CLPP. Differences in soil textural components between treatments were also correlated with CLPP; likely causes of these differences are discussed. Our results suggest that 1 year after treatment, CLPP from this mined forest ecosystem are resilient to a spring prescribed fire but not forest thinning. We conclude that differences in CLPP are likely to result from complex interactions among soil properties that mediate substrate availability, microbial nutrient demand, and microbial community composition.

Impact of paleoceanographic changes at glacial/interglacial transitions on benthic foraminiferal faunas of the eastern North Atlantic (IODP Expedition 339, Site U1385)

NASA Astrophysics Data System (ADS)

Grunert, Patrick; Hodell, David; Alvarez Zarikian, Carlos; Hernández-Molina, F. Javier; Stow, Dorrik A. V.

2014-05-01

Communities of deep-sea foraminifera are sensitive recorders of environmental conditions. Consequently, the actualistic interpretation of fossil foraminiferal assemblages has become a valuable tool for the reconstruction of paleoceanographic conditions at the sea-floor. For the present study, a quantitative data-set of benthic foraminifera >125μm from the eastern North Atlantic has been analysed to understand paleoceanographic changes (AMOC, ventilation, productivity) associated with glacial/interglacial transitions in more detail. The data-set consists of a series of samples from IODP Site U1385 spanning Terminations I, II and IV and several short-term (millennial-scale) climatic events including the Younger Dryas (YD), Heinrich (H) 1, and H 11. On the family and generic levels, a characteristic succession of foraminiferal assemblages can be recognized at all studied glacial/interglacial transitions: a glacial fauna with abundant occurrences of cassidulinids (Cassidulina, Globocassidulina); a fauna characterized by high abundances of buliminds (Bulimina, Globobulimina) and/or bolivinellids (Bolivinita) that is associated with H-events and the beginning of each termination; a fauna with high abundances of miliolids (mainly Pyrgo) and cibicidids at the end of the termination; an interglacial fauna composed of buliminds (Bulimina), gavellinellids (Gyroidinoides), and pseudoparrellids (Epistominella). For the glacial and interglacial endmembers, this succession indicates a moderately oxygenated environment at the seafloor with mesotrophic conditions due to moderate export productivity. For the early phase of the terminations as well as the short-term events, the dominance of infaunal taxa and high abundances of deep infaunal taxa indicate an environment with high export productivity that is mainly controlled by oxygen. Conversely, the absence of these taxa and the presence of miliolids suggests well-ventilated environments and decreasing export productivity during the later phase of the terminations. While the evaluation on the generic level indicates repetitive paleoenvironmental changes for the studied transitions, the taxonomic analysis on the species level reveals significant differences between the terminations. These differences primarily concern the H-events and the early phase of the terminations. H 1 differs from other such events by showing the highest abundances of deep infaunal like Globobulimina affinis. In contrast, H 11 is characterized by high abundances of Bulimina marginata and Cassidulina laevigata/teretis which are rare to absent during H 1. A similar pattern is observed for a H-event associated with the onset of Termination IV. In contrast, the H-event preceding Termination IV shows high abundances of Bolivinita quadrilatera, a species absent all other samples. The explanation of the faunal differences between the terminations despite a rather comparable environmental framework (poor ventilation and/or high export productivity) indicates that the nature of short-term events is fairly diverse and an individual perspective has to be put on each these events. E.g., in the case of H 1, increased primary productivity and/or severely reduced AMOC compared to other such events might provide explanations. For the other, less well known events new isotopic results are expected to help with the explanation.

Current understanding on Villosiclava virens, a unique flower-infecting fungus causing rice false smut disease.

PubMed

Fan, Jing; Yang, Juan; Wang, Yu-Qiu; Li, Guo-Bang; Li, Yan; Huang, Fu; Wang, Wen-Ming

2016-12-01

Villosiclava virens (Vv) is an ascomycete fungal pathogen that causes false smut disease in rice. Recent reports have revealed some interesting aspects of the enigmatic pathogen to address the question of why it specifically infects rice flowers and converts a grain into a false smut ball. Comparative and functional genomics have suggested specific adaptation of Vv in the colonization of rice flowers. Anatomical studies have disclosed that Vv specifically infects rice stamen filaments before heading and intercepts seed formation. In addition, Vv can occupy the whole inner space of a spikelet embracing all floral organs and activate the rice grain-filling network, presumably for nutrient acquisition to support the development of the false smut ball. This profile provides a general overview of the rice false smut pathogen, and summarizes advances in the Vv life cycle, genomics and genetics, and the molecular Vv-rice interaction. Current understandings of the Vv-rice pathosystem indicate that it is a unique and interesting system which can enrich the study of plant-pathogen interactions. Taxonomy: Ustilaginoidea virens is the anamorph form of the pathogen (Kingdom Fungi; Phylum Ascomycota; Class Ascomycetes; Subclass Incertae sedis; Order Incertae sedis; Family Incertae sedis; Genus Ustilaginoidea). The teleomorph form is Villosiclava virens (Kingdom Fungi; Phylum Ascomycota; Class Ascomycetes; Subclass Sordariomycetes; Order Hypocreales; Family Clavicipitaceae; Genus Villosiclava). Disease symptoms: The only visible symptom is the replacement of rice grains by ball-shaped fungal mycelia, namely false smut balls. When maturing, the false smut ball is covered with powdery chlamydospores, and the colour changes to yellowish, yellowish orange, green, olive green and, finally, to greenish black. Sclerotia are often formed on the false smut balls in autumn. Identification and detection: Vv conidia are round to elliptical, measuring 3-5 μm in diameter. Chlamydospores are ornamented with prominent irregularly curved spines, which are 200-500 nm in length. The sclerotia are black, horseshoe-shaped and irregular oblong or flat, ranging from 2 to 20 mm. Nested polymerase chain reaction (PCR) and quantitative PCR have been developed to specifically detect Vv presence in rice tissues and other biotic and abiotic samples in fields. Host range: Rice is the primary host for Vv. Natural infection by Vv has been found on several paddy field weeds, including Digitaria marginata, Panicum trypheron, Echinochloa crusgalli and Imperata cylindrica. However, the occurrence of infection in these potential alternative hosts is very rare. Life cycle: Vv infects rice spikelets at the late rice booting stage, and produces false smut balls covered with dark-green chlamydospores. Occasionally, sclerotia form on the surface of false smut balls in late autumn when the temperature fluctuates greatly between day and night. Both chlamydospores and sclerotia may serve as primary infection sources. Rainfall at the rice booting stage is a major environmental factor resulting in epidemics of rice false smut disease. Disease control: The use of fungicides is the major approach for the control of Vv. Several fungicides, such as cuproxat SC, copper oxychloride, tebuconazole, propiconazole, difenoconazole and validamycin, are often applied. However, the employment of resistant rice cultivars and genes has been limited, because of the poor understanding of rice resistance to Vv. Useful websites: Villosiclava virens genome sequence: http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=JHTR01#contigs. © 2015 BSPP and John Wiley & Sons Ltd.

Measuring ecosystem functioning of soil mega-aggregates produced by soil/litter mix-feeding animals

NASA Astrophysics Data System (ADS)

Kaneko, N.

2009-04-01

Some soil animals are soil/litter mix-feeders. They are known to produce long-lasting soil structures (e.g. casts and molting chamber), and these structures will modify resource availability and environmental conditions for plants and soil organisms. Good examples are epigeic Megascolecid earthworms (Uchida et al., 2004) and Xystodesmid millipeds (Toyota et al., 2006), both found in Japan. In this study we examined chemical, physical and biological properties of soil focusing on multi-functioning of aggregates made by these animals. Since 2003, we manipulated densities of epigeic earthworms in a field encloser (35 m2) (three replications) at a cool temperate forest in Japan. At a no-worm (NW) treatment, all the worms have been collected every year by hand. At the same place, we prepared a control treatment in an encloser (Closed control; CC) and outside the encloser (Open control; OC). We examined surface soil and plant growth after 5-years field manipulation of oak dominated forest. Growth of two Liliaceae forest floor herbs; Smilacina japonica and Polygonatum odoratum, and oak (Quercus crispula) seedlings and canopy oak trees were recorded. Reduction of aggregates after elimination of earthworms was observed in a field condition. The manipulation site showed decreased soil pH, Ca, Mg, and P concentration and total carbon storage was also reduced. There was a negative significant correlation between casts abundance and soil NH4-N, and a positive significance was observed between casts abundance and growth of S. japonica, and oak seedlings. Radial growth of canopy oak trees was decreased at NW treatment compared to CC and OC. Leaf N contents of oak seedling at NW were significantly lower in NW, but canopy oak trees did not show any difference in leaf-N. Although S. japonica and P. odoratum were both found in a same forest floor, S. japonica is known as nutrient limited plants in spring, whereas P. odoratum is light limited. Oak seedlings are depending early growth on their seed nutrient, and the canopy oak trees seem to be nutrient limited. Thus in this forest, the nutrient condition mediated by earthworm activity was a strong factor influencing plant species-specific growth and this correlation was clear when we used the cast abundance as an independent factor but it was not clear when we used the worm abundance or biomass for explanation variables. In laboratory incubations, fresh casts of earthworm Metaphire hilgendorfi contained higher NH4-N which was mostly nitrified within 4-weeks. The 4-weeks aged casts of the earthworm and millipede Parafontaria laminata emitted significantly more N2O whereas the modified soil had strong CH4 acidification capacity. Therefore the animal effects on greenhouse effect gas should be evaluated for CO2, N2O and CH4 at the same time. We then confirmed that megaaggregates, probably cast origin, tended to contain more carbon than fine soil. Combining our data from various study sites in Japan, the amount of carbon contained in megaaggregates (> 2 mm) in 0-5 cm layer ranged from 200 to 1000 g C per m2. Animal feeding activities maintained substantial amount of surface soil aggregates. Therefore, the activity of soil/litter mix feeders can be linked to the carbon dynamics by evaluating worm's soil engineering effect.

Fungal Planet description sheets: 469-557.

PubMed

Crous, P W; Wingfield, M J; Burgess, T I; Hardy, G E St J; Crane, C; Barrett, S; Cano-Lira, J F; Le Roux, J J; Thangavel, R; Guarro, J; Stchigel, A M; Martín, M P; Alfredo, D S; Barber, P A; Barreto, R W; Baseia, I G; Cano-Canals, J; Cheewangkoon, R; Ferreira, R J; Gené, J; Lechat, C; Moreno, G; Roets, F; Shivas, R G; Sousa, J O; Tan, Y P; Wiederhold, N P; Abell, S E; Accioly, T; Albizu, J L; Alves, J L; Antoniolli, Z I; Aplin, N; Araújo, J; Arzanlou, M; Bezerra, J D P; Bouchara, J-P; Carlavilla, J R; Castillo, A; Castroagudín, V L; Ceresini, P C; Claridge, G F; Coelho, G; Coimbra, V R M; Costa, L A; da Cunha, K C; da Silva, S S; Daniel, R; de Beer, Z W; Dueñas, M; Edwards, J; Enwistle, P; Fiuza, P O; Fournier, J; García, D; Gibertoni, T B; Giraud, S; Guevara-Suarez, M; Gusmão, L F P; Haituk, S; Heykoop, M; Hirooka, Y; Hofmann, T A; Houbraken, J; Hughes, D P; Kautmanová, I; Koppel, O; Koukol, O; Larsson, E; Latha, K P D; Lee, D H; Lisboa, D O; Lisboa, W S; López-Villalba, Á; Maciel, J L N; Manimohan, P; Manjón, J L; Marincowitz, S; Marney, T S; Meijer, M; Miller, A N; Olariaga, I; Paiva, L M; Piepenbring, M; Poveda-Molero, J C; Raj, K N A; Raja, H A; Rougeron, A; Salcedo, I; Samadi, R; Santos, T A B; Scarlett, K; Seifert, K A; Shuttleworth, L A; Silva, G A; Silva, M; Siqueira, J P Z; Souza-Motta, C M; Stephenson, S L; Sutton, D A; Tamakeaw, N; Telleria, M T; Valenzuela-Lopez, N; Viljoen, A; Visagie, C M; Vizzini, A; Wartchow, F; Wingfield, B D; Yurchenko, E; Zamora, J C; Groenewald, J Z

2016-12-01

Novel species of fungi described in this study include those from various countries as follows: Australia : Apiognomonia lasiopetali on Lasiopetalum sp., Blastacervulus eucalyptorum on Eucalyptus adesmophloia , Bullanockia australis (incl. Bullanockia gen. nov.) on Kingia australis , Caliciopsis eucalypti on Eucalyptus marginata , Celerioriella petrophiles on Petrophile teretifolia , Coleophoma xanthosiae on Xanthosia rotundifolia , Coniothyrium hakeae on Hakea sp., Diatrypella banksiae on Banksia formosa , Disculoides corymbiae on Corymbia calophylla , Elsinoë eelemani on Melaleuca alternifolia , Elsinoë eucalyptigena on Eucalyptus kingsmillii , Elsinoë preissianae on Eucalyptus preissiana , Eucasphaeria rustici on Eucalyptus creta , Hyweljonesia queenslandica (incl. Hyweljonesia gen. nov.) on the cocoon of an unidentified microlepidoptera, Mycodiella eucalypti (incl. Mycodiella gen. nov.) on Eucalyptus diversicolor , Myrtapenidiella sporadicae on Eucalyptus sporadica , Neocrinula xanthorrhoeae (incl. Neocrinula gen. nov.) on Xanthorrhoea sp., Ophiocordyceps nooreniae on dead ant, Phaeosphaeriopsis agavacearum on Agave sp., Phlogicylindrium mokarei on Eucalyptus sp., Phyllosticta acaciigena on Acacia suaveolens , Pleurophoma acaciae on Acacia glaucoptera , Pyrenochaeta hakeae on Hakea sp., Readeriella lehmannii on Eucalyptus lehmannii , Saccharata banksiae on Banksia grandis , Saccharata daviesiae on Daviesia pachyphylla , Saccharata eucalyptorum on Eucalyptus bigalerita , Saccharata hakeae on Hakea baxteri , Saccharata hakeicola on Hakea victoria , Saccharata lambertiae on Lambertia ericifolia , Saccharata petrophiles on Petrophile sp., Saccharata petrophilicola on Petrophile fastigiata , Sphaerellopsis hakeae on Hakea sp., and Teichospora kingiae on Kingia australis. Brazil : Adautomilanezia caesalpiniae (incl . Adautomilanezia gen. nov.) on Caesalpina echinata , Arthrophiala arthrospora (incl. Arthrophiala gen. nov.) on Sagittaria montevidensis , Diaporthe caatingaensis (endophyte from Tacinga inamoena ), Geastrum ishikawae on sandy soil, Geastrum pusillipilosum on soil, Gymnopus pygmaeus on dead leaves and sticks, Inonotus hymenonitens on decayed angiosperm trunk, Pyricularia urashimae on Urochloa brizantha , and Synnemellisia aurantia on Passiflora edulis . Chile : Tubulicrinis australis on Lophosoria quadripinnata. France : Cercophora squamulosa from submerged wood, and Scedosporium cereisporum from fluids of a wastewater treatment plant. Hawaii : Beltraniella acaciae , Dactylaria acaciae , Rhexodenticula acaciae , Rubikia evansii and Torula acaciae (all on Acacia koa ) . India : Lepidoderma echinosporum on dead semi-woody stems, and Rhodocybe rubrobrunnea from soil. Iran : Talaromyces kabodanensis from hypersaline soil. La Réunion : Neocordana musarum from leaves of Musa sp. Malaysia : Anungitea eucalyptigena on Eucalyptus grandis × pellita , Camptomeriphila leucaenae (incl. Camptomeriphila gen. nov.) on Leucaena leucocephala , Castanediella communis on Eucalyptus pellita , Eucalyptostroma eucalypti (incl. Eucalyptostroma gen. nov.) on Eucalyptus pellita , Melanconiella syzygii on Syzygium sp., Mycophilomyces periconiae (incl. Mycophilomyces gen. nov.) as hyperparasite on Periconia on leaves of Albizia falcataria , Synnemadiella eucalypti (incl. Synnemadiella gen. nov.) on Eucalyptus pellita , and Teichospora nephelii on Nephelium lappaceum. Mexico : Aspergillus bicephalus from soil. New Zealand : Aplosporella sophorae on Sophora microphylla , Libertasomyces platani on Platanus sp., Neothyronectria sophorae (incl. Neothyronectria gen. nov.) on Sophora microphylla , Parastagonospora phoenicicola on Phoenix canariensis , Phaeoacremonium pseudopanacis on Pseudopanax crassifolius , Phlyctema phoenicis on Phoenix canariensis , and Pseudoascochyta novae-zelandiae on Cordyline australis. Panama : Chalara panamensis from needle litter of Pinus cf. caribaea . South Africa : Exophiala eucalypti on leaves of Eucalyptus sp., Fantasmomyces hyalinus (incl. Fantasmomyces gen. nov.) on Acacia exuvialis , Paracladophialophora carceris (incl. Paracladophialophora gen. nov.) on Aloe sp., and Umthunziomyces hagahagensis (incl. Umthunziomyces gen. nov.) on Mimusops caffra. Spain : Clavaria griseobrunnea on bare ground in Pteridium aquilinum field, Cyathus ibericus on small fallen branches of Pinus halepensis , Gyroporus pseudolacteus in humus of Pinus pinaster , and Pseudoascochyta pratensis (incl. Pseudoascochyta gen. nov.) from soil. Thailand : Neoascochyta adenii on Adenium obesum , and Ochroconis capsici on Capsicum annuum . UK : Fusicolla melogrammae from dead stromata of Melogramma campylosporum on bark of Carpinus betulus . Uruguay : Myrmecridium pulvericola from house dust. USA : Neoscolecobasidium agapanthi (incl. Neoscolecobasidium gen. nov.) on Agapanthus sp . , Polyscytalum purgamentum on leaf litter, Pseudopithomyces diversisporus from human toenail, Saksenaea trapezispora from knee wound of a soldier, and Sirococcus quercus from Quercus sp . Morphological and culture characteristics along with DNA barcodes are provided.

An assessment of arthropod prey resources at Nakula Natural Area Reserve, a potential site of reintroduction for Kiwikiu (Pseudonestor xanthophrys) and Maui `Alauahio (Parareomyza montana).

USGS Publications Warehouse

Banko, Paul C.; Peck, Robert W.; Cappadonna, Justin; Steele, Claire; Leonard, David L.; Mounce, Hanna L.; Becker, Dusti; Swinnerton, Kirsty

2015-01-01

Hawaiian forest birds have declined dramatically since humans arrived in the archipelago. Birds from all foraging guilds have been affected but insectivorous species are currently at greatest risk of extinction. On the island of Maui, populations and ranges of the insectivorous kiwikiu (Maui parrotbill; Pseudonestor xanthophrys) and Maui ‘alauahio (Maui creeper; Paroreomyza montana) have declined significantly from historic levels primarily due to habitat loss, predation,disease, and food web disruption, leading to federal listings of endangered species and species of concern, respectively. Recovery plans for these birds include reestablishment of populations in parts of their former range. Nakula Natural Area Reserve on the leeward side of HaleakalāVolcano has been targeted for release of wild-caught or captive-bred individuals. The mesic, montane koa-‘ōhi‘a (Acacia koa-Metrosideros polymorpha) forest at Nakula has been heavily impacted through grazing by feral ungulates, but recent management actions to exclude these animals are promoting forest recovery. The objective of this study was to assess the arthropod prey base at Nakula in preparation for reintroductions of kiwikiu and Maui ‘alauahio. To accomplish that goal, we compared arthropod abundances at Nakula to those at Hanawi Natural Area Reserve and Waikamoi Preserve, areas where kiwikiu and Maui ‘alauahio are currently found. We also identified diets of kiwikiu and Maui ‘alauahio from fecal samples to better understand and evaluate the prey base at Nakula. Assessment methods included clipping branch tips to sample arthropods within the foliage of koa and ‘ōhi‘a, using traps to quantify arthropods on koa and ‘ōhi‘a bark surfaces, counting exit holes to quantify abundances of beetles (Coleoptera) within dead branches of koa, and measuring the density of arthropods within the stems of ‘ākala (Rubus hawaiiensis). The diet of kiwikiu was dominated by caterpillars (Lepidoptera larvae), which comprised 90% of all prey items for 50 adult birds and 98% of all prey for two nestlings. Caterpillars were also the most important prey for Maui ‘alauahio (43% for 104 adult birds) although spiders (Araneae, 16%), beetles (12%) and true bugs, planthoppers and psyllids (Hemiptera; 12%) were also important. Caterpillars were generally the most abundant type of arthropod in the foliage of koa and ‘ōhi‘a, although spiders, beetles and hemipterans were also common. Total arthropod biomass and caterpillar biomass at Nakula was as great, or greater, than that observed at Hanawi and Waikamoi per unit of foliage of both koa and ‘ōhi‘a. Spiders generally dominated the bark fauna on both koa and ‘ōhi‘a at all sites although isopods (Isopoda), millipedes (Myriapoda: Millipeda) and lacewings (Neuroptera) were also abundant at Waikamoi and Hanawi. Total arthropod biomass on bark, as well as the biomass of several individual taxa, was significantly lower at Nakula than the other sites. Our measurement of the density of beetle exit holes in dead koa branches found no difference between Nakula and Waikamoi. Finally, no difference existed in the abundance of arthropods (primarily caterpillars and moth pupae) within ‘ākala stems among sites. With the exception of bark surfaces, our results suggest that the arthropod prey base for birds on primary foraging substrates at Nakula is similar to that found at two sites within the current range of kiwikiu and Maui ‘alauahio. However, our results should be viewed with caution because they are limited to the scale of individual branch, tree, or ‘ākala stem. To complete the assessment, our results should be scaled up to the landscape level by determining the density of each substrate within each site. Key arthropod prey of kiwikiu and Maui ‘alauahio are available at Nakula and, as habitat restoration continues, food abundance should increase to the point at which populations of these birds can be supported.

GENPLAT: an Automated Platform for Biomass Enzyme Discovery and Cocktail Optimization

PubMed Central

Walton, Jonathan; Banerjee, Goutami; Car, Suzana

2011-01-01

The high cost of enzymes for biomass deconstruction is a major impediment to the economic conversion of lignocellulosic feedstocks to liquid transportation fuels such as ethanol. We have developed an integrated high throughput platform, called GENPLAT, for the discovery and development of novel enzymes and enzyme cocktails for the release of sugars from diverse pretreatment/biomass combinations. GENPLAT comprises four elements: individual pure enzymes, statistical design of experiments, robotic pipeting of biomass slurries and enzymes, and automated colorimeteric determination of released Glc and Xyl. Individual enzymes are produced by expression in Pichia pastoris or Trichoderma reesei, or by chromatographic purification from commercial cocktails or from extracts of novel microorganisms. Simplex lattice (fractional factorial) mixture models are designed using commercial Design of Experiment statistical software. Enzyme mixtures of high complexity are constructed using robotic pipeting into a 96-well format. The measurement of released Glc and Xyl is automated using enzyme-linked colorimetric assays. Optimized enzyme mixtures containing as many as 16 components have been tested on a variety of feedstock and pretreatment combinations. GENPLAT is adaptable to mixtures of pure enzymes, mixtures of commercial products (e.g., Accellerase 1000 and Novozyme 188), extracts of novel microbes, or combinations thereof. To make and test mixtures of ˜10 pure enzymes requires less than 100 μg of each protein and fewer than 100 total reactions, when operated at a final total loading of 15 mg protein/g glucan. We use enzymes from several sources. Enzymes can be purified from natural sources such as fungal cultures (e.g., Aspergillus niger, Cochliobolus carbonum, and Galerina marginata), or they can be made by expression of the encoding genes (obtained from the increasing number of microbial genome sequences) in hosts such as E. coli, Pichia pastoris, or a filamentous fungus such as T. reesei. Proteins can also be purified from commercial enzyme cocktails (e.g., Multifect Xylanase, Novozyme 188). An increasing number of pure enzymes, including glycosyl hydrolases, cell wall-active esterases, proteases, and lyases, are available from commercial sources, e.g., Megazyme, Inc. (www.megazyme.com), NZYTech (www.nzytech.com), and PROZOMIX (www.prozomix.com). Design-Expert software (Stat-Ease, Inc.) is used to create simplex-lattice designs and to analyze responses (in this case, Glc and Xyl release). Mixtures contain 4-20 components, which can vary in proportion between 0 and 100%. Assay points typically include the extreme vertices with a sufficient number of intervening points to generate a valid model. In the terminology of experimental design, most of our studies are "mixture" experiments, meaning that the sum of all components adds to a total fixed protein loading (expressed as mg/g glucan). The number of mixtures in the simplex-lattice depends on both the number of components in the mixture and the degree of polynomial (quadratic or cubic). For example, a 6-component experiment will entail 63 separate reactions with an augmented special cubic model, which can detect three-way interactions, whereas only 23 individual reactions are necessary with an augmented quadratic model. For mixtures containing more than eight components, a quadratic experimental design is more practical, and in our experience such models are usually statistically valid. All enzyme loadings are expressed as a percentage of the final total loading (which for our experiments is typically 15 mg protein/g glucan). For "core" enzymes, the lower percentage limit is set to 5%. This limit was derived from our experience in which yields of Glc and/or Xyl were very low if any core enzyme was present at 0%. Poor models result from too many samples showing very low Glc or Xyl yields. Setting a lower limit in turn determines an upper limit. That is, for a six-component experiment, if the lower limit for each single component is set to 5%, then the upper limit of each single component will be 75%. The lower limits of all other enzymes considered as "accessory" are set to 0%. "Core" and "accessory" are somewhat arbitrary designations and will differ depending on the substrate, but in our studies the core enzymes for release of Glc from corn stover comprise the following enzymes from T. reesei: CBH1 (also known as Cel7A), CBH2 (Cel6A), EG1(Cel7B), BG (β-glucosidase), EX3 (endo-β1,4-xylanase, GH10), and BX (β-xylosidase). PMID:22042431

GENPLAT: an automated platform for biomass enzyme discovery and cocktail optimization.

PubMed

Walton, Jonathan; Banerjee, Goutami; Car, Suzana

2011-10-24

The high cost of enzymes for biomass deconstruction is a major impediment to the economic conversion of lignocellulosic feedstocks to liquid transportation fuels such as ethanol. We have developed an integrated high throughput platform, called GENPLAT, for the discovery and development of novel enzymes and enzyme cocktails for the release of sugars from diverse pretreatment/biomass combinations. GENPLAT comprises four elements: individual pure enzymes, statistical design of experiments, robotic pipeting of biomass slurries and enzymes, and automated colorimeteric determination of released Glc and Xyl. Individual enzymes are produced by expression in Pichia pastoris or Trichoderma reesei, or by chromatographic purification from commercial cocktails or from extracts of novel microorganisms. Simplex lattice (fractional factorial) mixture models are designed using commercial Design of Experiment statistical software. Enzyme mixtures of high complexity are constructed using robotic pipeting into a 96-well format. The measurement of released Glc and Xyl is automated using enzyme-linked colorimetric assays. Optimized enzyme mixtures containing as many as 16 components have been tested on a variety of feedstock and pretreatment combinations. GENPLAT is adaptable to mixtures of pure enzymes, mixtures of commercial products (e.g., Accellerase 1000 and Novozyme 188), extracts of novel microbes, or combinations thereof. To make and test mixtures of ˜10 pure enzymes requires less than 100 μg of each protein and fewer than 100 total reactions, when operated at a final total loading of 15 mg protein/g glucan. We use enzymes from several sources. Enzymes can be purified from natural sources such as fungal cultures (e.g., Aspergillus niger, Cochliobolus carbonum, and Galerina marginata), or they can be made by expression of the encoding genes (obtained from the increasing number of microbial genome sequences) in hosts such as E. coli, Pichia pastoris, or a filamentous fungus such as T. reesei. Proteins can also be purified from commercial enzyme cocktails (e.g., Multifect Xylanase, Novozyme 188). An increasing number of pure enzymes, including glycosyl hydrolases, cell wall-active esterases, proteases, and lyases, are available from commercial sources, e.g., Megazyme, Inc. (www.megazyme.com), NZYTech (www.nzytech.com), and PROZOMIX (www.prozomix.com). Design-Expert software (Stat-Ease, Inc.) is used to create simplex-lattice designs and to analyze responses (in this case, Glc and Xyl release). Mixtures contain 4-20 components, which can vary in proportion between 0 and 100%. Assay points typically include the extreme vertices with a sufficient number of intervening points to generate a valid model. In the terminology of experimental design, most of our studies are "mixture" experiments, meaning that the sum of all components adds to a total fixed protein loading (expressed as mg/g glucan). The number of mixtures in the simplex-lattice depends on both the number of components in the mixture and the degree of polynomial (quadratic or cubic). For example, a 6-component experiment will entail 63 separate reactions with an augmented special cubic model, which can detect three-way interactions, whereas only 23 individual reactions are necessary with an augmented quadratic model. For mixtures containing more than eight components, a quadratic experimental design is more practical, and in our experience such models are usually statistically valid. All enzyme loadings are expressed as a percentage of the final total loading (which for our experiments is typically 15 mg protein/g glucan). For "core" enzymes, the lower percentage limit is set to 5%. This limit was derived from our experience in which yields of Glc and/or Xyl were very low if any core enzyme was present at 0%. Poor models result from too many samples showing very low Glc or Xyl yields. Setting a lower limit in turn determines an upper limit. That is, for a six-component experiment, if the lower limit for each single component is set to 5%, then the upper limit of each single component will be 75%. The lower limits of all other enzymes considered as "accessory" are set to 0%. "Core" and "accessory" are somewhat arbitrary designations and will differ depending on the substrate, but in our studies the core enzymes for release of Glc from corn stover comprise the following enzymes from T. reesei: CBH1 (also known as Cel7A), CBH2 (Cel6A), EG1(Cel7B), BG (β-glucosidase), EX3 (endo-β1,4-xylanase, GH10), and BX (β-xylosidase).