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Sample records for miocene phractocephalus catfish

  1. A southern species of the tropical catfish genus Phractocephalus (Teleostei: Siluriformes) in the Miocene of South America

    NASA Astrophysics Data System (ADS)

    Azpelicueta, María de las Mercedes; Cione, Alberto Luis

    2016-04-01

    Catfish bones from Tortonian (Miocene) freshwater beds of central Argentina are here identified as pertaining to a new species of the tropical pimelodid genus Phractocephalus. The new species differs from the other recent and fossil species of the genus in skull, pectoral girdle and spine characters. The material was found in different localities near the city of Paraná, Entre Ríos Province. The bearing horizon is the so-called "Conglomerado osífero" which constitutes the lowermost beds of the fluvial Ituzaingó Formation. The aquatic vertebrate fauna occurring in the bearing bed shows a similar generic composition to several northern South American Miocene units where Phractocephalus remains were found. This report extends the range of Phractocephalus more than 2000 km to the South. The record is in agreement with higher global temperatures and putative ample hydrographic connections of the river basins in the Paraná area with the Amazon basin until at least the early late Miocene.

  2. Catfishes

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Catfishes are esteemed and popular foodfish throughout much of the world. Important commercial and subsistence fisheries exist in Europe, Asia, Africa, and North and South America. The popularity of catfishes as food stimulated rapid development of catfish aquaculture in the past quarter century. Ap...

  3. Production and Processing Traits of Blue Catfish, Blue Catfish X Channel Catfish Hybrids, and Two Strains of Channel Catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel catfish is the primary species used in commercial catfish farming. However, increased incidence of disease and associated economic losses have led to speculation that other catfish species or hybrids also have potential. In this study production and processing traits of blue catfish, blue x ...

  4. 76 FR 10433 - Mandatory Inspection of Catfish and Catfish Products

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-02-24

    ...The Food Safety and Inspection Service (FSIS) is proposing regulations requiring continuous inspection of catfish and catfish products. FSIS is proposing these regulations to implement provisions of the Food, Conservation, and Energy Act (Farm Bill) of 2008. The proposed regulations are intended to ensure that catfish products distributed in commerce are wholesome, not adulterated, and......

  5. Evaluation of immune responses against the parasite Ichthyophthirius multifiliis between channel catfish and hybrid catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel catfish is a dominant aquaculture species in the USA and has been cultured for several decades. Recently, an increasing number of producers are showing an interest in the culture of hybrid catfish (channel catfish × blue catfish) instead of channel catfish due to its performance traits. The ...

  6. Catfish production using intensive aeration

    Technology Transfer Automated Retrieval System (TEKTRAN)

    For the last 3 years, researchers at UAPB and NWAC have been monitoring and verifying production yields in intensively aerated catfish ponds with aeration rates greater than 6 hp/acre. We now have three years of data on commercial catfish production in intensively aerated ponds. With stocking densi...

  7. Flavobacterium columnare chemotaxis to channel catfish mucus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Flavobacterium columnare is a Gram-negative pathogen of many species of wild and cultured fish, especially channel catfish (Ictalurus punctatus). This motile microbe is responsible for severe economic losses to the catfish industry. Flavobacterium columnare isolates from diseased channel catfish b...

  8. Vaccination against enteric septicaemia of catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Edwardsiella ictaluri, the causative agent of enteric septicemia (ESC) of catfish, is one of the most economically important diseases of cultured channel catfish. In 2002, Wagner and coworkers reported that enteric septicemia of catfish (ESC) and columnaris (Flavobacterium columnaris) were the two m...

  9. Spine anatomy reveals the diversity of catfish through time: a case study of Synodontis (Siluriformes).

    PubMed

    Pinton, Aurélie; Fara, Emmanuel; Otero, Olga

    2006-01-01

    Synodontis (Mochokidae, Siluriformes) is a freshwater catfish endemic to Africa. The 118 extant species are present in almost all hydrographic basins. Some species are restricted to a single stream, whereas others have a vast distribution. Synodontis is known in the fossil record since the Miocene, and its history depends on the connections among African basins through time. The identification of species in the fossil record is essential to reconstruct this historical pattern. Catfish pectoral and dorsal spines are robust, they preserve well and they form most of the fossil remains for the genus Synodontis. Unfortunately, the criteria for the identification of extant Synodontis species are not applicable to fossil specimens. Here, we define 11 original morphological characters that permit to discriminate four extant species from the Chad-Chari hydrographic system. Six of these characters are defined on pectoral spines and five on dorsal spines. We then show that these characters can be used successfully for identifying fossil specimens. In particular, we present a case study in which we identify Synodontis cf. schall and Brachysynodontis cf. batensoda in the hominid-bearing sector Toros-Menalla (Late Miocene, northern Chad). We show that spine anatomy can be a powerful tool to recognise catfish species through time and thus to identify historical diversity pattern. PMID:16261332

  10. Miocene Coralline algae

    SciTech Connect

    Bosence, D.W.J.

    1988-01-01

    The coralline algae (Order Corallinales) were sedimentologically and ecologically important during the Miocene, a period when they were particularly abundant. The many poorly described and illustrated species and the lack of quantitative data in coralline thalli make specific determinations particularly difficult, but some species are well known and widespread in the Tethyan area. The sedimentologic importance of the Miocene coralline algae is reflected in the abundance of in-situ coralline buildups, rhodoliths, and coralline debris facies at Malta and Spain; similar sequences are known throughout the Tethyan Miocene. In-situ buildups vary from leafy crustose biostromes to walled reefs with dense coralline crusts and branches. Growth forms are apparently related to hydraulic energy. Rhodoliths vary from leafy, crustose, and open-branched forms in muddy sediments to dense, crustose, and radial-branching forms in coarse grainstones. Rhodolith form and internal structure correlate closely with hydraulic energy. Coralline genera are conservative and, as such, are useful in paleoenvironmental analysis. Of particular interest are the restricted depth ranges of recent coralline genera. More research is needed on the sedimentology, paleoecology, and systematics of the Cenozoic corallines, as they have particular value in paleoenvironmental analysis.

  11. Antarctic Miocene Climate

    NASA Astrophysics Data System (ADS)

    Ashworth, A. C.; Lewis, A. R.

    2013-12-01

    Fossils from Antarctic Miocene terrestrial deposits, coupled with stratigraphic, geochemical and paleontological data from marine boreholes, provide new insights into the climatic history of the continent. During the Miocene, ice caps coalesced to form ice sheets and vegetated surfaces gave way to barren expanses. The cryospheric changes especially have global climatic implications. The fossil data consists of diatoms, pollen and spores, and macroscopic remains of plants, ostracods, insects, molluscs and a fish. Plant fossils include wood and leaves of Nothofagus (southern beech), seeds of several vascular plants, including Ranunculus (buttercup), Hippuris (mare's-tail) and Myriophyllum (watermilfoil), megaspores of Isoetes (quillwort), and moss species. The insect chitin consists of larval head capsules of Chironomidae (midges) and exoskeletal parts of Coleoptera (beetles). The molluscs include freshwater gastropods and bivalves. The majority of these taxa are likely descendants of taxa that had survived on the continent from the Paleogene or earlier. Even though early Miocene glaciations may have been large, the climate was never cold enough to cause the extinction of the biota, which probably survived in coastal refugia. Early Miocene (c. 20 Ma) macrofossils from the McMurdo Dry Valleys (77°S) support palynological interpretations from the Cape Roberts and ANDRILL marine records that the upland vegetation was a shrub tundra. Mean summer temperature (MST) in the uplands was c. 6°C and possibly higher at the coast. The climate was wet, supporting mires and lakes. By the mid-Miocene, even though the climate continued to be wet. MST was c. 4°C which was too cold to support Nothofagus and most vascular plant species. Stratigraphic evidence indicates that the time between the Early and Mid-Miocene was a time of repeated ice advances and retreats of small glaciers originating from ice caps. At c. 14 Ma there appears to have been a modal shift in climate to

  12. Intensive production of hybrid catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Economic analysis by others shows clearly that under certain fish price-feed price combinations, intensively aerated ponds are not only an alternative, but are the profit-maximizing technology. We have raised hybrid catfish at stocking rates of 20,000/acre with aeration rates up to 10 hp/acre, produ...

  13. Potency of blue catfish, Ictalurus furcatus (individual vs pooled) sperm to fertilize stripped channel catfish, I. punctatus eggs on the production and performance of progeny

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel x blue hybrid catfish is the desired genotype for US farm-raised catfish industry. Induced spawning of gravid channel catfish, followed by fertilization of stripped eggs with blue catfish sperm is the only reliable means to produce hybrid catfish embryos in hatcheries. Hybrid catfish fry p...

  14. Miocene Antarctic Terrestrial Realm

    NASA Astrophysics Data System (ADS)

    Ashworth, A. C.; Lewis, A.; Marchant, D. R.

    2009-12-01

    The discovery of several locations in the Transantarctic Mountains that contain macrofossils and pollen is transforming our understanding of late Cenozoic Antarctica. The most southerly location is on the Beardmore Glacier (85.1°S) about 500 km from the South Pole. The environment was an active glacial margin in which plants, insects and freshwater mollusks inhabited the sand and gravel bars and small lakes on an outwash plain. In addition to leaves and wood of dwarf Nothofagus (Southern Beech) shrubs, achenes of Ranunculus (Buttercup), in situ cushion growth forms of mosses and a vascular plant, the assemblages contains various exoskeletal parts of carabid and curculionid beetles and a cyclorrhaphan fly, the shells of freshwater bivalve and gastropod species and a fish tooth. Initially the deposits were assigned a Pliocene age (3.5 Ma) but a mid- to early Miocene age is more probable (c. 14 - 25 Ma) based on correlation of fossil pollen from the deposits with 39Ar/40Ar dated pollen assemblages from the McMurdo Dry Valleys locations. The oldest location within the Dry Valleys also involved an active ice margin but was part of a valley system that was completely deglaciated for intervals long enough for thick paleosols to develop. The Friis Hills fossil deposits of the Taylor Valley region (77.8°S) are at least 19.76 Ma based on the 39Ar/40Ar age of a volcanic ash bed. The valley floor during the non-glacial phases had poorly-drained soils and the extensive development of mossy mires. Wood and leaves of Nothofagus are abundant in lacustrine deposits. The silts of shallow fluvial channels contain abundant megaspores and spiky leaves of the aquatic lycopod Isoetes (Quillwort). Fossils of beetles are also present in these deposits. During the glacial phases, proglacial lakes were surrounded by dwarfed, deciduous Nothofagus shrubs. The youngest fossils recovered from the Dry Valleys are from the Olympus Range (77.5°S) with an age of 14.07 Ma. The environment was an

  15. Water quality in hybrid catfish ponds after partial fish harvest

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Intensification of United States catfish aquaculture involves hybrid catfish ('channel catfish Ictalurus punctatus x ' blue catfish I. furcatus) grown in ponds with abundant aeration and high feeding rates. High feeding rates cause water quality deterioration because most of the nitrogen, phosphorus...

  16. Pyridoxine requirements of channel catfish.

    PubMed

    Andrews, J W; Murai, T

    1979-04-01

    In 20 and 12 week feeding trials, channel catfish fingerlings were fed purified diets containing five levels (0, 5, 10, 20, and 30 mg/kg) and six levels (0, 1, 2, 5, 10, and 20 mg/kg) of supplemental pyridoxine hydrochloride. Fish fed unsupplemented diets (pyridoxine content of 1.2 mg/kg) were characterized by anoxeria, nervous disorders, tetany, greenish-blue body coloration, and eventual mortality. Anemia, which has been reported in pyridoxine deficient salmonids, was not observed in pyridoxine deficient catfish. However, a microcytic, normochromic anemia was observed in groups fed high dietary levels of pyridoxine (20 mg/kg or greater). The dietary pyridoxine level required for maximal growth was approximately 3 mg/kg of diet. All other deficiency signs were prevented by 2.2 mg/kg of diet. PMID:430257

  17. Miocene reef corals: A review

    SciTech Connect

    Frost, S.H.

    1988-01-01

    Tectonic blockage in the Middle East of westward-flowing Tethys surface circulation during the latest Oligocene led to creation in the earliest Miocene of endemic Mediterranean, Western Atlantic-Caribbean, and Indo-Pacific realms. A great reduction in reef coral diversity from 60-80 Oligocene species to 25-35 early Miocene species occurred in the Western Atlantic-Caribbean and Mediterranean areas accompanied by a decrease in reef growth. A slower and less drastic change apparently occurred in the Indo-Pacific area. Early Miocene reef corals of the Western Atlantic-Caribbean comprise a transition between the cosmopolitan Oligocene fauna and its endemic mid-Miocene to modern counterpart. Although early Miocene reefs were dominated by a Porites-Montastrea assemblage, eastward flow of Pacific circulation brought with it ''exotic'' corals such as Coscinaraea and Pseudocolumnastrea. Also, many cosmopolitan genera persisted from the Oligocene. During the middle to late Miocene, most of the species still living on Holocene reefs evolved. As the Mediterranean basin became more restricted, there was a slow decline in reef corals from 20 - 25 species in the Aquitainian to less than five species in the Messinian. Eustatic lowstand led to the extinction of reef-building corals in the late Messinian. In the Indo-Pacific, Neogene evolution of reef corals was conservative. Excluding the Acroporidae and Seriatoporidae, most Holocene framework species had evolved by the middle Miocene. Interplay between regional tectonics and eustatic sea level changes led to extensive development of middle to late Miocene pinnacle reefs over the southwestern Pacific.

  18. Reducing size variation in hybrid catfish culture through graded partial harvest

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Hybrid Catfish (' Channel Catfish Ictalurus punctatus x ' Blue Catfish I. furcatus) have quickly become a major contributor to ictalurid catfish aquaculture in the United States. Hybrid Catfish have unique production characteristics compared with Channel Catfish, and rapid farmer adoption of the hyb...

  19. Evaluation of stomach tubes and gastric lavage for sampling diets from blue catfish and flathead catfish

    USGS Publications Warehouse

    Waters, D.S.; Kwak, T.J.; Arnott, J.B.; Pine, William E.

    2004-01-01

    We compared the ability to extract all stomach contents by using stomach tubes or gastric lavage to sample diets from blue catfish Ictalurus furcatus and flathead catfish Pylodictus olivarus. Pulsed gastric lavage (PGL) removed a significantly greater proportion of stomach content mass (95.6%) from blue catfish than did stomach tubes (14.6%). Percent mass of flathead catfish contents removed with PGL (96.0%) was not significantly different from that removed with stomach tubes (86.9%). Based on the greater effectiveness of PGL for blue catfish, combined with a shorter mean time required per sample (69 versus 118 s) and the better preservation of extracted diet material, we recommend using PGL as a nonlethal technique to collect diet samples from large catfishes.

  20. An overview of Miocene reefs

    SciTech Connect

    Jordan, C.F. Jr. ); Colgan, M.W. ); Frost, S.H. ); Glenn, E.C. ); Bosence, D. ); Esteban, M. )

    1990-05-01

    Miocene reefs lived approximately within the latitudes of 27{degree}S to 48{degree}N compared with 25{degree}S and 32{degree}N for Holocene reefs. This expansion of reef-growing environments was the result of warm Miocene climates, aided by a eustatic sea level rise and tectonic styles that provided numerous foundations for reef development. The majority of Miocene reefs are found in three main areas: (1) Southeast Asia and the western Pacific, (2) the Mediterranean-Middle East, and (3) Middle America and the Caribbean. These regions, with their distinctive suites of coral and foramineral species, formed three biological provinces; respectively, they are the Indo-Pacific, Tethyan, and Western Atlantic provinces. Miocene reefs in Southeast Asia occur in several foreland basins as patch reef complexes on paleohighs and as barrier reefs in back-arc basins. Those reefs in the Mediterranean occur as fringing reefs, middle-shelf patch reefs, or as barrier reefs on the edges of tectonic blocks associated with Alpine thrust belts. Most reefs in the Caribbean grew on isolated open-ocean highs of volcanic origin. Miocene reefs display a diversity of framework types: (1) coral-encrusting, red algal boundstones with diverse coral faunas, (2) branching coral-encrusting, red algal boundstones with a limited Poritid fauna, (3) encrusting red algal boundstones. Barrier reef systems are especially rich in encrusting red algae and robust corals; grainstones are common as interbedded sediment. Patch reef complexes, however, display muddy carbonate textures, may have less diverse coral faunas, and commonly have larger foraminifera. The global distribution of Miocene reefs is important because (1) it provides insight into a paleoclimatic view of the earth during a major greenhouse stage and (2) Miocene buildups, such as the Arun (EUR of 14 tcf) and Bima fields (EUR of about 100 MMBO), are exploration targets.

  1. Middle Miocene dispersals of apes.

    PubMed

    Andrews, Peter; Kelley, Jay

    2007-01-01

    The earliest record of fossil apes outside Africa is in the latest early Miocene of Turkey and eastern Europe. There were at least 2, and perhaps 4, species of ape, which were found associated with subtropical mixed environments of forest and more open woodland. Postcranial morphology is similar to that of early Miocene primates and indicates mainly generalized arboreal quadrupedal behaviours similar to those of less specialized New World monkeys such as Cebus. Robust jaws and thick enamelled teeth indicate a hard fruit diet. The 2 best known species of fossil ape are known from the site of Paşalar in Turkey. They have almost identical molar and jaw morphology. Molar morphology is also similar to that of specimens from Germany and Slovakia, but there are significant differences in the anterior teeth of the 2 Paşalar species. The more common species, Griphopithecus alpani, shares mainly primitive characters with early and middle Miocene apes in Africa, and it is most similar phenetically to Equatorius africanus from Maboko Island and Kipsaramon. The second species is assigned to a new species of Kenyapithecus, an African genus from Fort Ternan in Kenya, on the basis of a number of shared derived characters of the anterior dentition, and it is considered likely that there is a phylogenetic link between them. The African sites all date from the middle Miocene, similar in age to the Turkish and European ones, and the earliest emigration of apes from Africa coincides with the closure of the Tethys Sea preceding the Langhian transgression. Environments indicated for the African sites are mixtures of seasonal woodlands with some forest vegetation. The postcrania of both African taxa again indicate generalized arboreal adaptation but lacking specialized arboreal function. This middle Miocene radiation of both African and non-African apes was preceded by a radiation of arboreal catarrhine primates in the early Miocene, among which were the earliest apes. The earliest

  2. Catfish stings: A report of two cases

    PubMed Central

    Dorooshi, Gholamali

    2012-01-01

    Venomous catfish stings are a common environment hazard worldwide. Although these stings are often innocuous, significant morbidity may result from stings, including severe pain, retained foreign bodies, infection, respiratory compromise, arterial hypotension, and cardiac dysrhythmias. Treatment included hot water immersion, analgesia, wound exploration, and prophylactic antibiotics. In this article, two cases of stings by catfish referred to the poison center of Noor Hospital, Isfahan University of Medical Sciences and their treatments have been reported. PMID:23626639

  3. Practical use of copper sulfate in catfish production

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Copper sulfate has been used in aquaculture for many years to control weeds, algae, snails (which carry catfish trematode), and ecto-parasitic organisms in catfish production. Our research has also shown it to be safe and effective to treat fungus on various fish eggs (catfish, hybrid striped bass,...

  4. Impact of minimum daily dissolved oxygen concentration on production performance of hybrid female channel catfish x male blue catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Hybrid Catfish (female Channel Catfish Ictalurus punctatus X male Blue Catfish I. furcatus) were reared during two years as single-batch crops under two different dissolved oxygen (DO) regimes each year; a high-DO (control) treatment in which the minimum daily DO was maintained above 3.8 ppm during ...

  5. Spermatogonial stem cells specific marker identification in channel catfish, Ictalurus punctatus and blue catfish, I. furcatus.

    PubMed

    Shang, Mei; Su, Baofeng; Lipke, Elizabeth A; Perera, Dayan A; Li, Chao; Qin, Zhenkui; Li, Yun; Dunn, David A; Cek, Sehriban; Peatman, Eric; Dunham, Rex A

    2015-12-01

    Testicular germ cells of channel catfish, Ictalurus punctatus, and blue catfish, I. furcatus were separated into four layers with Percoll density gradient centrifugation, containing different cell types (40% in the first layer were spermatogonial stem cells, SSCs). Expression of seventeen genes was analyzed for cells from different layers by real-time quantitative PCR. Pfkfb4, Urod, Plzf, Integrin6, IntegrinV, Thy1 and Cdh1 genes showed the same expression change pattern in both channel and blue catfish as these genes were down-regulated in the spermatocytes and even more so in spermatids. Plzf and Integrin6 had especially high expression in SSCs and can be used as SSCs specific markers. Sox2 gene was up-regulated in spermatocytes and even more highly up-regulated in spermatids, which indicated it could be a spermatid marker. In contrast to channel catfish, Id4, Smad5 and Prdm14 gene expressions were strongly down-regulated in spermatocyte cells, but up-regulated in spermatid cells in blue catfish. Smad5 gene was down-regulated in spermatocytes, but up-regulated in both spermatogonia and spermatids, allowing identification as a marker for spermatocytes in blue catfish. Oct4, Id4, Gfrα2, Pum2 and Prdm14 genes showed different expression patterns in the testicular germ cells of channel and blue catfish. This may be a partial explanation to the differing responses of channel catfish and blue catfish to induced spawning technologies. The SSCs specific markers can be used for further SSCs labeling, which can increase the SSCs sorting efficiency and be applied in various studies involving SSCs and other germ cells. PMID:26251285

  6. Cart Regulates Food Intake in Channel Catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cocaine-and Amphetamine-Regulated Transcript (CART) is a potent hypothalamic anorectic peptide in mammals and fish. We hypothesized that increased food intake is associated with changes in expression of CART mRNA within the brain of channel catfish. Objectives were to clone the CART gene, examine ...

  7. Managing summertime off-flavors in catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Summertime phytoplankton blooms in channel catfish ponds often contain blue-green algae that produce musty or earthy odors. The odorous compounds are absorbed by fish across their gills and deposited in fatty tissues, giving fish undesirable “off-flavors.” When fish are declared off-flavored by proc...

  8. DEET toxicity to channel catfish sac fry

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The combination of open facilities, moisture, and warm weather during channel catfish Ictalurus punctatus spawning season causes mosquito-infestation problems. A common solution to mosquito problems in hatcheries is to use mosquito repellents applied to exposed skin and clothing. DEET (N,N-diethyl-...

  9. Virulent Aeromonas hydrophila in channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In this study, we investigated factors that predisposed catfish to motile aeromonas septicemia (MAS) caused by virulent Aeromonas hydrophila (vAh). Our results revealed that wounding on fish body surface was a prerequisite for vAh infection and disease development. A reproducible waterborne challeng...

  10. Miocene reefs in western Mediterranean

    SciTech Connect

    Esteban, M.

    1988-01-01

    Coral reefs were particularly abundant and well developed during the late Tortonian and Messinian in southeastern Spain, the Balearic Islands, Italy, Sicily, Algeria, and Morocco. These reefs occurred just before and during the deposition of the thick Messinian evaporite units in the basinal areas and disappeared completely from Mediteranean during the early Pliocene. Most of the coral reefs are fringing terrigenous coastal fan complexes with very small lagoons and show progradation of less than 2 km. Some of the reefs occur on, or are intercalated with, Neogene volcanics or Messinian evaporites. Barrier-reef complexes are less common, have extensive lagoons behind them, and show complex progradational geometries more than 10 km wide. Excellent outcrops allow detailed reconstruction of paleogeography and sea level changes. Progradation predominated during phases of relative sea level drops and stillsands, while significant retrogradation occurred during sea level rises. The coral reef wall framework is commonly less than 20 m thick and is dominated by Porites and, locally, Tarbellastrae. Older Miocene reefs are less well developed, but show greater diversity of corals and reef organisms. Younger Miocene reef complexes occurring in open ocean settings are formed by only one branching coral genus (Porites or, locally, Tarbellastraea) with branching colonies up to 7 m high. Halimeda sands are particularly abundant in the upper reef slopes with occasional intercalations of red algae pavements that most likely coincide with episodes of terrigenous influx.

  11. Miocene benthic foraminiferal isotope records: A synthesis

    USGS Publications Warehouse

    Savin, S.M.; Douglas, R.G.; Keller, G.; Killingley, J.S.; Shaughnessy, L.; Sommer, M.A.; Vincent, E.; Woodruff, F.

    1981-01-01

    18O 16O and 13C 12C ratios of Miocene benthic foraminifera from a number of Atlantic, Pacific and Indian Ocean DSDP sites (71, 77B, 206, 208, 238, 279, 289, 296, 329, 357 and 366A) have been compiled. These provide a rather detailed history of Miocene deep water especially in the Pacific Ocean. Bottom-water temperatures rose during the early Miocene and then declined rapidly during the middle Miocene. This decline was accompanied by an increase in Antarctic glaciation. Late Miocene bottom temperatures and Antarctic ice volumes are inferred to be similar to today's, but exhibited some fluctuation. The early Miocene ocean was less thermally stratified at intermediate and abyssal depths while the late Miocene deep ocean had a thermal structure generally similar to the modern ocean. Foraminiferal carbon isotope ratios at most of the sites varied quasi-sympathetically throughout the Miocene. These variations must reflect comparable variations in the mean 13C 12C of marine HCO3-. However, the causes of such variations are not yet clear. ?? 1981.

  12. Marine mammals from the Miocene of Panama

    NASA Astrophysics Data System (ADS)

    Uhen, Mark D.; Coates, Anthony G.; Jaramillo, Carlos A.; Montes, Camilo; Pimiento, Catalina; Rincon, Aldo; Strong, Nikki; Velez-Juarbe, Jorge

    2010-12-01

    Panama has produced an abundance of Neogene marine fossils both invertebrate (mollusks, corals, microfossils etc.) and vertebrate (fish, land mammals etc.), but marine mammals have not been previously reported. Here we describe a cetacean thoracic vertebra from the late Miocene Tobabe Formation, a partial cetacean rib from the late Miocene Gatun Formation, and a sirenian caudal vertebra and rib fragments from the early Miocene Culebra Formation. These finds suggest that Central America may yet provide additional fossil marine mammal specimens that will help us to understand the evolution, and particularly the biogeography of these groups.

  13. Habitat Suitability Index Models: Flathead Catfish

    USGS Publications Warehouse

    Lee, Lawrence A.; Terrell, James W.

    1987-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the flathead catfish (Pylodictis olivaris). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  14. Cannibalism in single-batch hybrid catfish production ponds

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Hybrid catfish are more efficiently harvested by seining than are Channel Catfish. Due to that, and their faster growth, hybrids are typically produced in “single-batch” production systems, either in intensively-aerated commercial ponds or in split-pond systems. In either production system, hybrids...

  15. Essential oils enhance fillet composition of channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We investigated the effects of a phytogenic feed additive (Digestarom® P.E.P. MGE) on growth performance, processing yield, fillet composition, and survival of pond raised channel catfish. Fifteen 0.4 ha ponds were stocked with 14,820 catfish (126 g/fish) per ha. Fish in control ponds were fed a 3...

  16. Production Practices of Commercial Catfish Producers in Northeast Louisiana.

    ERIC Educational Resources Information Center

    Letlow, Richard M.; Verma, Satish

    A study determined the yields obtained and the production practices followed by Louisiana commercial catfish farmers in Catahoula, Concordia, and Franklin Parishes. This information was used by the Louisiana Cooperative Extension Service (LCES) faculty to develop a catfish education program. The study: (1) determined use of selected recommended…

  17. Effects of DO cencentration on growth of juvenile channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Dissolved oxygen (DO) concentration has a major impact on feed consumption of channel catfish when raised in ponds; as DO concentration falls below 3.0 mg/L at night, feed consumption is negatively impacted. Channel catfish fry may experience a wide range of oxygen conditions in the hatchery depend...

  18. Low-Intensity channel catfish culture re-visited

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel catfish (Ictalurus punctatus) farmers can use a variety of management strategies to produce the larger-sized fish that processing plants increasingly seek. A low-intensity production strategy based on low stocking and aeration rates can be used to produce larger channel catfish. Stocker catf...

  19. Treating catfish diseases: walking the line between excess and moderation

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cost savings by using a cheaper disease treatment will increase profitability of any catfish farm. This invited producer presentation will discuss costs savings using copper sulfate in catfish production and a summation of our research, specifically in the hatchery. Copper sulfate is not approved ...

  20. Low-intensity, stocker-based channel catfish culture

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Low-intensity Channel Catfish production is characterized by low stocking rates, low installed aeration capacity, and no automated dissolved oxygen monitoring. Two studies conducted in nine 0.25-acre ponds quantified production characteristics of stocker Channel Catfish stocked for low-intensity foo...

  1. The longevity of Bolbophorus damnificus in channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Mortality, lower feed consumption, and slower or reduced growth occur in commercially grown channel catfish infected with the prodiplostomula of Bolbophorus damnificus. In this study, we determined the length of time that B. damnificus prodiplostomula remain in muscle tissue of the channel catfish....

  2. Panafrican distribution of Lower Miocene Hominoidea

    NASA Astrophysics Data System (ADS)

    Senut, Brigitte; Pickford, Martin; Wessels, Dudley

    1997-11-01

    Palaeontological survey of the Neogene littoral deposits of the Namaqualand coastal strip, Northern Cape Province, South Africa, has resulted in the collection of the first Lower Miocene faunas from South Africa. Among the mammals from Ryskop and Hondeklip Bay is a gorilla-sized hominoid. This discovery greatly increases the geographic range of early Miocene hominoids and suggests that even at this remote epoch, the superfamily had a Panafrican distribution.

  3. Miocene reefs of Dominican Republic

    SciTech Connect

    Evans, C.C.

    1988-01-01

    The reefs are overlain by conglomeratic strata. The stratigraphic setting of these reefs suggests that they have developed along the stalled portions of rapidly prograding fan deltas. Thickets and layers of coral debris are found seaward and stratigraphically above the well-developed reef. The matrix sediments are exclusively fine-grained sand to mud, and the fauna are suggestive of more open shelf conditions. In thickets, branched (porites spp., Pocillopora spp.), small massive (Montastrea spp., Siderastrea spp.), and foliose or plate like (Agaricia spp.) corals are found upright in the muddy sediment. Similarities in coral species and areal proximity suggest that thickets are the source of most layers of coralline debris. The association of coral debris with graded bedding and cross-bedding suggests that coral debris has been reworked by storms. The growth of corals and development of coral reefs in the Miocene-Pliocene Yaque Group is limited only by opportunities created by the slowing of siliciclastic sedimentation. Soft, muddy, terrigenous substrates and a continuing supply of terrigenous mud exert only a limited, indirect effect on reef growth.

  4. Species profiles: life histories and environmental requirements of coastal fishes and invertebrates (Gulf of Mexico). Sea catfish and Gafftopsail catfish

    SciTech Connect

    Muncy, R.J.; Wingo, W.M.

    1983-10-01

    Species profiles are literature summaries of the taxonomy, morphology, range, life history, and environmental requirements of coastal aquatic species. They are designed to assist in environmental impact assessment. Sea catfish and gafftopsail catfish are not preferred sport nor commercial fish; however, their high abundance inshore along the northern Gulf of Mexico causes them to rank 2nd or 3rd and no lower than 13th of all saltwater finfish in angler surveys. Sea catfish comprised less than 2% in industrial bottom trawl fisheries although surveys in depths to 20 m revealed they comprised 2 to 36%, by weight, of the bottom fishes. Sea catfish attain sexual maturity before 2 years of age, and spawn from May to August in shallow bays. Adult males do not feed for 60 to 80 days while carrying fertilized eggs and sac-fry in their mouths. Juveniles remain in low-salinity estuaries until decreasing water temperatures above 25/sup 0/C but remain inshore at temperatures above 10/sup 0/C. Sea catfish and gafftopsail catfish have been collected from waters with salinities ranging from 0 to 30 ppt, but prefer water salinities above 10 ppt. Water depth preferences of sea catfish and gafftopsail catfish appear related to water temperature, salinity, and bottom substrate. As juveniles, both species are opportunistic feeders utilizing microcrustaceans, and as adults, they feed upon detritus, microcrustaceans, and larger invertebrates. Blue crabs and shrimp are considered major food items. 70 references, 2 figures.

  5. Oral vaccination of channel catfish against enteric septicemia of catfish (ESC) using a live attenuated Edwardsiella ictaluri isolate

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Enteric septicemia of catfish (ESC), caused by Edwardsiella ictaluri, is the most problematic bacterial disease affecting catfish aquaculture in the southeastern United States. Efforts to develop an effective ESC vaccine have had limited industrial success. In commercial settings, ESC vaccines are t...

  6. Oral vaccination of channel catfish against enteric septicemia of catfish using a live attenuated Edwardsiella ictaluri isolate

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Enteric septicemia of catfish (ESC), caused by Edwardsiella ictaluri, is the most problematic bacterial disease affecting catfish aquaculture in the southeastern United States. Efforts to develop an effective ESC vaccine have had limited industrial success. In commercial settings, ESC vaccines are...

  7. First Season Catfish Farming. A Workbook for Beginning Pond and Cage Culture of Channel Catfish. Teacher Edition and Student Edition.

    ERIC Educational Resources Information Center

    Oklahoma State Board of Vocational and Technical Education, Stillwater. Curriculum and Instructional Materials Center.

    This workbook, comprised of both the teacher and student editions, presents guidelines useful for first-year catfish farmers in Oklahoma using pond or cage cultures to raise channel catfish. The teacher edition is a set of unit guidelines only. Contents include a list of suggested readings, important addresses with types of information available…

  8. Diversity, phylogenetic distribution, and origins of venomous catfishes

    PubMed Central

    2009-01-01

    Background The study of venomous fishes is in a state of relative infancy when compared to that of other groups of venomous organisms. Catfishes (Order Siluriformes) are a diverse group of bony fishes that have long been known to include venomous taxa, but the extent and phylogenetic distribution of this venomous species diversity has never been documented, while the nature of the venoms themselves also remains poorly understood. In this study, I used histological preparations from over 100 catfish genera, basic biochemical and toxicological analyses of fin spine extracts from several species, and previous systematic studies of catfishes to examine the distribution of venom glands in this group. These results also offer preliminary insights into the evolutionary history of venom glands in the Siluriformes. Results Histological examinations of 158 catfish species indicate that approximately 1250-1625+ catfish species should be presumed to be venomous, when viewed in conjunction with several hypotheses of siluriform phylogeny. Maximum parsimony character optimization analyses indicate two to three independent derivations of venom glands within the Siluriformes. A number of putative toxic peptides were identified in the venoms of catfish species from many of the families determined to contain venomous representatives. These peptides elicit a wide array of physiological effects in other fishes, though any one species examined produced no more than three distinct putative toxins in its venom. The molecular weights and effects produced by these putative toxic peptides show strong similarities to previously characterized toxins found in catfish epidermal secretions. Conclusion Venom glands have evolved multiple times in catfishes (Order Siluriformes), and venomous catfishes may outnumber the combined diversity of all other venomous vertebrates. The toxic peptides found in catfish venoms may be derived from epidermal secretions that have been demonstrated to accelerate the

  9. "No evidence for intercohort cannibalism in mixed-size cultures of food-size and fingerling hybrid catfish (channel catfish x blue catfish) grown in ponds in winter or summer."

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Hybrid catfish (' Channel Catfish Ictalurus punctatus X ' Blue Catfish I. furcatus) are normally harvested by seining single-batch pond production systems in fall or winter. Ponds are typically restocked without draining. There is concern that without completely draining the pond after harvest, food...

  10. The late early Miocene Sabine River

    SciTech Connect

    Manning, E. )

    1990-09-01

    Work on a new late early Miocene vertebrate fossil site, in a paleochannel deposit of the upper Carnahan Bayou Member of the lower Fleming Formation, has revealed unexpected data on the course and nature of the Sabine River of that time. Screen washing for smaller vertebrate remains at the site, just west of the Sabine River in Newton County, central eastern Texas, has resulted in the recovery of early Permian, Early Cretaceous, Late Cretaceous (Maestrichtian), Paleocene/Eocene, late Eocene, and Oligocene/Miocene fossils, in addition to the main early Miocene fauna. The reworked fossils, as well as distinctive mineral grains, show that the late early Miocene Sabine River was connected to the Texas/Oklahoma/Arkansas boundary section of the Red River, as well as to rivers draining the southern Ouachita Mountains. These rivers must have joined the Texas/Louisiana boundary section of the Sabine River somewhere in northwest Louisiana at that time. This suggests that the Louisiana section of the present Red River pirated the Texas/Oklahoma/Arkansas boundary section of the river some time after the early Miocene. The preservation of recognizable fossils transported hundreds of miles in a large river itself requires explanation. It is speculated here that the late early Miocene Sabine River incorporated a large amount of the then recently deposited volcanic ash from the Trans-Pecos Volcanic Field. Montmorillonite clay from the altered volcanic ash would have made the river very turbid, which could have allowed coarse sand-sized particles to be carried in the suspended load of the river, rather than in its bed load (where they would have been destroyed by the rolling chert gravel). Additional evidence for such long-distance fossil transport in the late early Miocene rivers of the western Gulf Coastal Plain comes from the abundant Cretaceous fossils of the upper Oakville Formation of southeast Texas and the Siphonina davisi zone of the southeast Texas subsurface.

  11. Miocene reef carbonates of Mariana Islands

    SciTech Connect

    Siegrist, H.G. Jr.

    1988-02-01

    Miocene carbonates in the southern Mariana Islands are impressive for their lithologic diversity, thicknesses (over 250 m), and geographic extent (> 20% combined outcrop coverage over four major high islands: Guam, Rota, Tinian and Saipan). Sections are dominated either by lagoonal algal-foraminiferal wackestones and mudstones with locally abundant high-energy shelly-skeletal facies, or by rubbly to muddy, fore-reef-to-bank deposits of packstones and grainstones with highly diverse and variable biogenic clasts. Fresh to deeply weathered volcaniclastic material may comprise at least 80% of some high-energy fore-reef facies, whereas lagoonal and bank deposits usually contain less than 0.5% terrigenous material. Surprisingly, the Miocene in the Marianas lacks almost completely any reef-core facies. Several poorly developed coral-rich mounds on Saipan and localized laminated red algal buildups on Guam appear to constitute the extant reef-wall facies in the Miocene. The lack of buildups may be a matter of differential survival; it may result from headland erosion and benching associated with emergence of narrow reef tracts as has been postulated by others for south Guam. Alternatively, the authors are proposing that Miocene bathymetry and the volume of terrigenous influx militated against significant reef core formation. Radiometric age dating of these reef carbonates has proven unsuccessful because pervasive diagenesis has transformed the entire Miocene section into low-magnesium calcite with minor and occasional dolomite. Freshwater phreatic diagenesis accounts for the principal porosity variation and trace element distribution.

  12. Efficacy of Florfenicol for Control of Mortality Associated with Edwardsiella ictaluri in Three Species of Catfish.

    PubMed

    Gaunt, Patricia S; Chatakondi, Nagaraj; Gao, Dana; Endris, Richard

    2015-03-01

    The efficacy of florfenicol for control of mortality associated with Edwardsiella icatluri was studied in fingerlings of Channel Catfish Ictalurus puntatus (Delta strain), Blue Catfish I. furcatus (D&B strain), and a hybrid catfish (Delta strain Channel Catfish × D&B strain Blue Catfish). On day 0, fish were immersion challenged in 65-L aquaria. For each of the three species of catfish, 10 aquaria were randomly assigned to two treatment groups, either treated with florfenicol at 0 mg/kg of body weight (unmedicated feed) or at 10 mg/kg (medicated feed). Fish were treated for 10 consecutive days, monitored for mortality during this treatment period, and observed for 14 d afterwards. Post observation, all survivors were humanely euthanized in tricaine methanesulfonate, cultured for E. ictaluri, and examined for gross pathology. The mean cumulative percent mortality from enteric septicemia of catfish (ESC) challenge among the three genotypes of catfish did not differ between Blue Catfish, hybrid, and Channel Catfish in treated or control groups. However, the florfenicol-treated fish had a significantly lower mean cumulative mortality (6%) than the controls (78%). All genotypes of catfish tested were responsive to treatment with florfenicol-medicated feed for control of mortality associated with ESC. There were no significant differences in mortality associated with hybrid catfish, blue catfish, and Channel Catfish (Delta strain). PMID:26306332

  13. Evaluation of a modified Ph-shift process to reduce 2-methylisoborneol and geosmin in spiked catfish and produce a consumer acceptable fried catfish nugget-like product

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Farm-raised catfish weighing about 1 kg were selected and placed into 3 tanks each containing 1000 L of water. Treatment of tanks was blocked by week. In week 1, catfish in tanks were allowed to depurate 24 h, and then were held an additional 24 h. In weeks 2 and 3, catfish were treated as in wee...

  14. Diagnostic imaging of injuries caused by venomous and traumatogenic catfish.

    PubMed

    Negreiros, Marcos Mendes de Barros; Yamashita, Seizo; Sardenberg, Trajano; Fávero, Edson Luiz; Ribeiro, Felipe Augusto Horácio; Haddad, William Teixeira; Haddad, Vidal

    2016-01-01

    Injuries caused by fish are common in marine and freshwater environments. Catfish of the Ariidae and Pimelodidae families cause about 80% of those injuries. One of the complications of injuries caused by fish is the retention of fragments of the stinger in the wounds. Here we report five cases (of a total of 127 injuries caused by catfish in the Brazilian coast) in which the retained fragments were detected by radiological examination. Retained fragments should be considered in patients stung by catfish. A simple X-ray is sufficient to detect fragments of stingers in the wounds. PMID:27598647

  15. Diagnostic imaging of injuries caused by venomous and traumatogenic catfish.

    PubMed

    Negreiros, Marcos Mendes de Barros; Yamashita, Seizo; Sardenberg, Trajano; Fávero, Edson Luiz; Ribeiro, Felipe Augusto Horácio; Haddad, William Teixeira; Haddad, Vidal

    2016-01-01

    Injuries caused by fish are common in marine and freshwater environments. Catfish of the Ariidae and Pimelodidae families cause about 80% of those injuries. One of the complications of injuries caused by fish is the retention of fragments of the stinger in the wounds. Here we report five cases (of a total of 127 injuries caused by catfish in the Brazilian coast) in which the retained fragments were detected by radiological examination. Retained fragments should be considered in patients stung by catfish. A simple X-ray is sufficient to detect fragments of stingers in the wounds.

  16. The Miocene Ocean: Paleoceanography and Biogeography

    NASA Astrophysics Data System (ADS)

    Schlanger, Seymour O.

    This volume brings together research carried out within the Cenozoic Paleoceanography Project (CENOP), a goal of which was to generate paleoceanographic reconstructions of the Miocene Epoch, 24 to 5 Ma. On the basis of stable isotope and quantitative micropaleontological studies, the authors have related these data bases to parameters and processes of the Miocene Ocean, including paleogeography, stratigraphy, circulation, water mass distributions, temperature variability, vertical water mass structure, biogeography, and biotic evolution.That these authors attained their goal is attested to by the quality and scope of the 14 chapters presented in this valuable treatise. The Miocene Epoch was chosen because it was in this interval of time that major ice sheets became a permanent feature of Earth's surface. The presentation of this stunning amount of data and interpretation is very well organized for the researcher as well as for the students and professors who will surely use the book as a basis for seminars.

  17. Miocene precursors to Great Barrier Reef

    SciTech Connect

    Davies, P.J.; Symonds, P.A.; Feary, D.A.; Pigram, C.

    1988-01-01

    Huge reefs of Miocene age are present in the Gulf of Papua north of the present-day Great Barrier Reef and to the east on the Marion and Queensland Plateaus. In the Gulf of Papua, Miocene barrier reefs formed the northern forerunner of the Great Barrier Reef, extending for many hundreds of kilometers along the eastern and northern margin of the Australian craton within a developing foreland basin. Barrier reefs, slope pinnacle reefs, and platform reefs are seen in seismic sections and drill holes. Leeside talus deposits testify to the high energy impinging on the eastern margin of these Miocene reefs. The Queensland Plateau is a marginal plateau east of the central Great Barrier Reef and separated from it by a rift trough. Miocene reefs occupied an area of about 50,000 km/sup 2/ and grew on salt-controlled highs on the western margin of the plateau and on a regional basement high extending from the platform interior to its southern margin. Reef growth has continued to the present day, although two major contractions in the area covered by reefs occurred during the Miocene. The Marion Plateau is present directly east of the Great Barrier Reef and during the Micoene formed a 30,000-km/sup 2/ platform with barrier reefs along its northern margin and huge platform reefs and laggons on the platform interior. These reefs grew on a flat peneplained surface, the whole area forming a large shallow epicontinental sea. In all three areas, the middle Miocene formed the acme of reef expansion in the region.

  18. Method for inducing saprolegniasis in channel catfish

    USGS Publications Warehouse

    Howe, G.E.; Rach, J.J.; Olson, J.J.

    1998-01-01

    A method was developed to uniformly and systematically induce saprolegniasis in channel catfish Ictalurus punctatus. Three different methods for inducing saprolegniasis were evaluated in waters containing known zoospore concentrations of Saprolegnia parasitica (1) low-temperature shock to induce immunosuppression: (2) physical abrasion stress; and (3) a combination of both low temperature shock and abrasion stress. Low-temperature shock or abrasion stress alone were not effective for inducing saprolegniasis. Only 10% of fish stressed by low-temperature shock alone became infected. No fish receiving abrasion stress treatments alone became infected even though these fish were subject to significant abrasion and dewatering stress. A combination of low-temperature and abrasion stress, however, was sufficient to induce saprolegniasis in 100% of fish tested and resulted in 90% mortality. No fish became infected in the positive control group (exposed to zoospores of S. Parasitica without stress) or in the negative control group. The combined-stress method should enable researchers to induce saprolegniasis in channel catfish at will to study its pathogenesis or to test the efficacy of candidate antifungal treatments. In conducting efficacy studies, therapeutic treatments must begin immediately when the first signs of saprolegniasis are observed because the disease progresses quickly and is deadly.

  19. 52. FRONT VIEW OF INSIDE DOOR AT 'CATFISH' SILO Everett ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    52. FRONT VIEW OF INSIDE DOOR AT 'CATFISH' SILO Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  20. 38. VIEW SHOWING 'CATFISH' SILO ELEVATOR IN UP POSITION, LOOKING ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    38. VIEW SHOWING 'CATFISH' SILO ELEVATOR IN UP POSITION, LOOKING NORTHWEST Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  1. 50. VIEW OF HYDRAULIC PUMP INSIDE 'CATFISH' SILO Everett Weinreb, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    50. VIEW OF HYDRAULIC PUMP INSIDE 'CATFISH' SILO Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  2. 46. VIEW OF ELECTRIC OUTLET BOX AT 'CATFISH' SILO, LOOKING ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    46. VIEW OF ELECTRIC OUTLET BOX AT 'CATFISH' SILO, LOOKING NORTHWEST Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  3. 37. CLOSEUP VIEW OF DOOR AT 'CATFISH' SILO Everett Weinreb, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    37. CLOSE-UP VIEW OF DOOR AT 'CATFISH' SILO Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  4. 36. CLOSEUP OF ELEVATOR DOOR AT 'CATFISH' SILO, LOOKING NORTH ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    36. CLOSE-UP OF ELEVATOR DOOR AT 'CATFISH' SILO, LOOKING NORTH Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  5. 39. VIEW OF CONTROL BOX AT 'CATFISH' SILO, LOOKING NORTH ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    39. VIEW OF CONTROL BOX AT 'CATFISH' SILO, LOOKING NORTH Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  6. 43. DETAIL VIEW OF 'CATFISH' LAUNCH PAD (continues view of ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    43. DETAIL VIEW OF 'CATFISH' LAUNCH PAD (continues view of CA-57-7) Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  7. 57. VIEW SHOWING GRAFFITI IN STAIRWELL INSIDE 'CATFISH' SILO Everett ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    57. VIEW SHOWING GRAFFITI IN STAIRWELL INSIDE 'CATFISH' SILO Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  8. 45. VIEW OF 'CATFISH' LAUNCH AREA, LOOKING NORTHWEST Everett Weinreb, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    45. VIEW OF 'CATFISH' LAUNCH AREA, LOOKING NORTHWEST Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  9. 55. VIEW SHOWING GRAFFITI IN STAIRWELL INSIDE 'CATFISH' SILO Everett ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    55. VIEW SHOWING GRAFFITI IN STAIRWELL INSIDE 'CATFISH' SILO Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  10. 40. VIEW SHOWING TOP OF 'CATFISH' SILO, LOOKING SOUTH Everett ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    40. VIEW SHOWING TOP OF 'CATFISH' SILO, LOOKING SOUTH Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  11. 41. OVERALL VIEW SHOWING ENTRANCE TO 'CATFISH' SILO, LOOKING SOUTH ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    41. OVERALL VIEW SHOWING ENTRANCE TO 'CATFISH' SILO, LOOKING SOUTH Marilyn Ziemer, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  12. 48. DETAIL VIEW OF AIR VENT AT 'CATFISH' LAUNCH PAD ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    48. DETAIL VIEW OF AIR VENT AT 'CATFISH' LAUNCH PAD Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  13. 56. VIEW SHOWING GRAFFITI IN STAIRWELL INSIDE 'CATFISH' SILO Everett ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    56. VIEW SHOWING GRAFFITI IN STAIRWELL INSIDE 'CATFISH' SILO Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  14. 58. VIEW SHOWING GRAFFITI IN STAIRWELL INSIDE 'CATFISH' SILO Everett ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    58. VIEW SHOWING GRAFFITI IN STAIRWELL INSIDE 'CATFISH' SILO Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  15. 35. VIEW OF GATES INTO 'CATFISH' SILO, LOOKING SOUTH Marilyn ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    35. VIEW OF GATES INTO 'CATFISH' SILO, LOOKING SOUTH Marilyn Ziemer, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  16. 47. VIEW OF AIR VENT AT 'CATFISH' SILO, LOOKING SOUTHEAST. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    47. VIEW OF AIR VENT AT 'CATFISH' SILO, LOOKING SOUTHEAST. ENTRANCE TO 'BRAVO' IN BACK Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  17. 34. VIEW OF GATE INTO LAUNCH AREA, LOOKING SOUTHWEST; 'CATFISH' ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    34. VIEW OF GATE INTO LAUNCH AREA, LOOKING SOUTHWEST; 'CATFISH' DOORS OPEN Marilyn Ziemer, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  18. 51. FRONT VIEW OF ELEVATOR LIFT IN 'CATFISH' SILO Everett ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    51. FRONT VIEW OF ELEVATOR LIFT IN 'CATFISH' SILO Everett Weinreb, photographer, March 1988 - Mount Gleason Nike Missile Site, Angeles National Forest, South of Soledad Canyon, Sylmar, Los Angeles County, CA

  19. Physiology and immunology of mucosal barriers in catfish (Ictalurus spp.)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The mucosal barriers of catfish (Ictalurus spp.) constitute the first line of defense against pathogen invasion while simultaneously carrying out a diverse array of other critical physiological processes, including nutrient adsorption, osmoregulation, waste excretion, and environmental sensing. Catf...

  20. Water hardness influences Flavobacterium columnare pathogenesis in channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Studies were conducted to determine aspects of water chemistry responsible for large differences in pathogenesis and mortality rates in challenges of channel catfish Ictalurus punctatus with Flavobacterium columnare; challenges were conducted in water supplying the Stuttgart National Aquaculture Res...

  1. Trophic relations of introduced flathead catfish in an atlantic river

    USGS Publications Warehouse

    Baumann, Jessica R.; Kwak, Thomas J.

    2011-01-01

    The flathead catfish Pylodictis olivaris is a large piscivore that is native to the Mississippi and Rio Grande river drainages but that has been widely introduced across the United States. River ecologists and fisheries managers are concerned about introduced flathead catfish populations because of the negative impacts on native fish communities or imperiled species associated with direct predation and indirect competition from this apex predator. We studied the trophic relations of introduced flathead catfish in an Atlantic river to further understand the effects on native fish communities. Crayfish (Astacidea) occurred most frequently in the flathead catfish diet, while sunfish Lepomis spp. comprised the greatest percentage by weight. Neither of two sympatric imperiled fish species (the federally endangered Cape Fear shiner Notropis mekistocholas and the Carolina redhorse Moxostoma sp., a federal species of concern) was found in any diet sample. An ontogenetic shift in diet was evident when flathead catfish reached about 300 mm, and length significantly explained the variation in the percent composition by weight of sunfish and darters Etheostoma and Percina spp. Flathead catfish showed positive prey selectivity for taxa that occupied similar benthic microhabitat, highlighting the importance of opportunistic feeding and prey encounter rates. Flathead catfish displayed a highly variable diel feeding chronology during July, when they had a mean stomach fullness of 0.32%, but then showed a single midday feeding peak during August (mean fullness = 0.52%). The gastric evacuation rate increased between July (0.40/h) and August (0.59/h), as did daily ration, which more than doubled between the 2 months (3.06% versus 7.37%). Our findings increase the understanding of introduced flathead catfish trophic relations and the degree of vulnerability among prey taxa, which resource managers may consider in fisheries management and conservation of native fish populations and

  2. Miocene reef carbonates of Mariana Islands

    SciTech Connect

    Siegrist, H.G. Jr.

    1988-01-01

    Miocene carbonates in the southern Mariana Islands are impressive for their lithologic diversity, thicknesses (over 250 m), and geographic extend (>20% combined outcrop coverage over four major high islands: Guam, Rota, Tinian and Saipan). Sections are dominated either by lagoonal algal-foraminiferal wackestones and mudstones with locally abundant high-energy shelly-skeletal facies, or by rubbly to muddy, fore-reef-to-bank deposits of packstones and grainstones with highly diverse and variable biogenic clasts. Fresh to deeply weathered volcaniclastic material may comprise at least 80% of some high-energy fore-reef facies, whereas lagoonal and bank deposits usually contain less than 0.5% terrigenous material. Surprisingly, the Miocene in the Marianas lacks almost completely any reef-core facies. Several poorly developed coral-rich mounds on Saipan and localized laminated red algal buildups on Guam appear to constitute the extant reef-wall facies in the Miocene. The lack of buildups may be a matter of differential survival; it may result from headland erosion and benching associated with emergency of narrow reef tracts as has been postulated by others for south Guam. Radiometric age dating of these reef carbonates has proven unsuccessful because pervasive diagenesis has transformed the entire Miocene section into low-magnesium calcite with minor and occasional dolomite. Freshwater phreatic diagenesis accounts for the principal porosity variation and trace element distribution.

  3. Catfish stings and the venom apparatus of the African catfish Clarias gariepinus (Burchell, 1822), and stinging catfish Heteropneustes fossilis (Bloch, 1794).

    PubMed

    Satora, Leszek; Kuciel, Michal; Gawlikowski, Tomasz

    2008-01-01

    The ability of catfish to inflict extremely painful wounds with their pectoral and dorsal stings has been well known for many decades. The venom apparatus of the African catfish Clarias gariepinus (Burchell, 1822), and stinging catfish Heteropneustes fossilis (Bloch, 1794) is constituted by a single, sharp and stout sting immediately in front of the soft-rayed portion of the pectoral fins. The sting has well developed articulations, making it possible for it to become erect and locked. The toxicological centres in Poland have recorded 17 cases of envenomations caused by stinging catfish and African catfish; the injury was accompanied by intense pain, numbness of the site, dizziness, local oedema and erythema. In addition, systemic symptoms such as tachycardia, weakness and arterial hypotension were observed. The treatment of these injuries should include cleansing of the wound and surrounding area. Immersion of the wounded extremity in hot water (45 degrees C) was used for the pain control. An attempt to remove any spinal sheath or remnant must be undertaken. Antibiotic management depends on several factors: the age and immune status of the victim, the interval between injury and presentation, or the presence of a foreign body. The most serious long-term complications of sting envenomation involve infections.

  4. DNA barcoding of catfish: species authentication and phylogenetic assessment.

    PubMed

    Wong, Li Lian; Peatman, Eric; Lu, Jianguo; Kucuktas, Huseyin; He, Shunping; Zhou, Chuanjiang; Na-nakorn, Uthairat; Liu, Zhanjiang

    2011-03-15

    As the global market for fisheries and aquaculture products expands, mislabeling of these products has become a growing concern in the food safety arena. Molecular species identification techniques hold the potential for rapid, accurate assessment of proper labeling. Here we developed and evaluated DNA barcodes for use in differentiating United States domestic and imported catfish species. First, we sequenced 651 base-pair barcodes from the cytochrome oxidase I (COI) gene from individuals of 9 species (and an Ictalurid hybrid) of domestic and imported catfish in accordance with standard DNA barcoding protocols. These included domestic Ictalurid catfish, and representative imported species from the families of Clariidae and Pangasiidae. Alignment of individual sequences from within a given species revealed highly consistent barcodes (98% similarity on average). These alignments allowed the development and analyses of consensus barcode sequences for each species and comparison with limited sequences in public databases (GenBank and Barcode of Life Data Systems). Validation tests carried out in blinded studies and with commercially purchased catfish samples (both frozen and fresh) revealed the reliability of DNA barcoding for differentiating between these catfish species. The developed protocols and consensus barcodes are valuable resources as increasing market and governmental scrutiny is placed on catfish and other fisheries and aquaculture products labeling in the United States.

  5. Foodborne agents associated with the consumption of aquaculture catfish.

    PubMed

    McCoy, Erica; Morrison, Jamie; Cook, Victor; Johnston, John; Eblen, Denise; Guo, Chuanfa

    2011-03-01

    In the Food, Conservation, and Energy Act (Farm Bill) of 2008, Congress amended the Federal Meat Inspection Act to provide that catfish be inspected by the U.S. Department of Agriculture's Food Safety and Inspection Service (FSIS). As part of the development of its inspection program, the FSIS conducted an assessment of the food safety risk associated with consuming farm-raised catfish. To thoroughly identify hazards for consideration in the risk assessment, the scientific literature was surveyed for all potential agents that have been linked to illness associated with farm-raised catfish consumption. A review of microbial hazards suggested that Salmonella is the foodborne pathogen most likely to be associated with catfish, but the impact of other pathogens remains unclear. This review also summarizes the current data available on chemical residues in catfish, including pesticides and heavy metals, and any regulatory levels that have been established for these compounds. The current usage of veterinary drugs in aquaculture also is outlined, including information on unapproved usage of drugs in catfish.

  6. DNA Barcoding of Catfish: Species Authentication and Phylogenetic Assessment

    PubMed Central

    Wong, Li Lian; Peatman, Eric; Lu, Jianguo; Kucuktas, Huseyin; He, Shunping; Zhou, Chuanjiang; Na-nakorn, Uthairat; Liu, Zhanjiang

    2011-01-01

    As the global market for fisheries and aquaculture products expands, mislabeling of these products has become a growing concern in the food safety arena. Molecular species identification techniques hold the potential for rapid, accurate assessment of proper labeling. Here we developed and evaluated DNA barcodes for use in differentiating United States domestic and imported catfish species. First, we sequenced 651 base-pair barcodes from the cytochrome oxidase I (COI) gene from individuals of 9 species (and an Ictalurid hybrid) of domestic and imported catfish in accordance with standard DNA barcoding protocols. These included domestic Ictalurid catfish, and representative imported species from the families of Clariidae and Pangasiidae. Alignment of individual sequences from within a given species revealed highly consistent barcodes (98% similarity on average). These alignments allowed the development and analyses of consensus barcode sequences for each species and comparison with limited sequences in public databases (GenBank and Barcode of Life Data Systems). Validation tests carried out in blinded studies and with commercially purchased catfish samples (both frozen and fresh) revealed the reliability of DNA barcoding for differentiating between these catfish species. The developed protocols and consensus barcodes are valuable resources as increasing market and governmental scrutiny is placed on catfish and other fisheries and aquaculture products labeling in the United States. PMID:21423623

  7. Nitrite-induced anemia in channel catfish, Ictalurus punctatus Rafinesque

    SciTech Connect

    Tucker, C.S. ); Francis-Floyd, R.; Beleau, M.H. )

    1989-08-01

    Since 1983 numerous cases of anemia have been reported in populations of channel catfish Ictalurus punctatus Rafinesque cultured in the southeastern United States. Environmental nitrite-nitrogen concentrations of 4 mg/L or more occur sporadically in channel catfish culture ponds, and the frequency of occurrence is greatest in the fall and spring. The authors have observed that some cases of anemia in populations of pond-raised channel catfish follow prolonged exposure to high concentrations of environmental nitrite. However, there was no evidence that exposure of channel catfish to environmental nitrite was the cause of the observed anemia. Hemolytic anemia following nitrite exposure has been described for sea bass Dicentrarchus labrax (L.) and rainbow trout Salmo gairdneri, but not for channel catfish. In the present study the authors show that a variable, but generally mild, anemia develops in channel catfish exposed to nitrite. They also offer a management procedure for preventing the development of anemia during periods of elevated environmental nitrite concentrations.

  8. Verification of otolith identity used by fisheries scientists for aging channel catfish

    USGS Publications Warehouse

    Long, James M.; Stewart, David R.

    2010-01-01

    Previously published studies of the age estimation of channel catfish Ictalurus punctatus based on otoliths have reported using the sagittae, whereas it is likely they were actually using the lapilli. This confusion may have resulted because in catfishes (ostariophyseans) the lapilli are the largest of the three otoliths, whereas in nonostariophysean fish the sagittae are the largest. Based on (1) scanning electron microscope microphotographs of channel catfish otoliths, (2) X-ray computed tomography scans of a channel catfish head, (3) descriptions of techniques used to removed otoliths from channel catfish reported in the literature, and (4) a sample of channel catfish otoliths received from fisheries biologists from around the country, it is clear that lapilli are most often used for channel catfish aging studies, not sagittae, as has been previously reported. Fisheries scientists who obtain otoliths from channel catfish can use the information in this paper to correctly identify otolith age.

  9. Catfish production using intensive, pond-based culture systems in Mississippi

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The leading form of aquaculture in the U.S. is catfish farming. Many catfish farmers feel that intensifying production will reduce production costs by improving efficiency and profitability. Catfish farmers in Mississippi have been able to increase production by increasing aeration rates (~5 to 15 h...

  10. Detection and quantification of virulent Aeromonas hydrophila in channel catfish tissues following waterborne challenge

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The aim of this study was to understand the pathogenesis of motile aeromonas septicemia caused by virulent A. hydrophila (vAh) in channel catfish, Ictalurus punctatus. Adipose fin clipped catfish were challenged with vAh using waterborne challenge method and the distribution of vAh in catfish tissue...

  11. 40 CFR 408.10 - Applicability; description of the farm-raised catfish processing subcategory.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ...-raised catfish processing subcategory. 408.10 Section 408.10 Protection of Environment ENVIRONMENTAL... SOURCE CATEGORY Farm-Raised Catfish Processing Subcategory § 408.10 Applicability; description of the farm-raised catfish processing subcategory. The provisions of this subpart are applicable to...

  12. 40 CFR 408.10 - Applicability; description of the farm-raised catfish processing subcategory.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...-raised catfish processing subcategory. 408.10 Section 408.10 Protection of Environment ENVIRONMENTAL... SOURCE CATEGORY Farm-Raised Catfish Processing Subcategory § 408.10 Applicability; description of the farm-raised catfish processing subcategory. The provisions of this subpart are applicable to...

  13. 40 CFR 408.10 - Applicability; description of the farm-raised catfish processing subcategory.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...-raised catfish processing subcategory. 408.10 Section 408.10 Protection of Environment ENVIRONMENTAL... SOURCE CATEGORY Farm-Raised Catfish Processing Subcategory § 408.10 Applicability; description of the farm-raised catfish processing subcategory. The provisions of this subpart are applicable to...

  14. 40 CFR 408.10 - Applicability; description of the farm-raised catfish processing subcategory.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ...-raised catfish processing subcategory. 408.10 Section 408.10 Protection of Environment ENVIRONMENTAL... SOURCE CATEGORY Farm-Raised Catfish Processing Subcategory § 408.10 Applicability; description of the farm-raised catfish processing subcategory. The provisions of this subpart are applicable to...

  15. 40 CFR 408.10 - Applicability; description of the farm-raised catfish processing subcategory.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ...-raised catfish processing subcategory. 408.10 Section 408.10 Protection of Environment ENVIRONMENTAL... SOURCE CATEGORY Farm-Raised Catfish Processing Subcategory § 408.10 Applicability; description of the farm-raised catfish processing subcategory. The provisions of this subpart are applicable to...

  16. Optimizing soybean meal levels in alternative diets for pond-raised hybrid catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We evaluated decreasing soybean meal levels by the use of a combination of cottonseed meal and corn germ meal for pond-raised hybrid catfish (channel catfish Ictalurus punctatus × blue catfish I. furcatus). Five 28% protein diets containing 40, 30, 25, 20, 15% of soybean meal were formulated based o...

  17. Exploring the biology of disease resistance and susceptibility in catfish through proteomics and primary cell culture

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Each year more than 200 families of channel catfish are screened through experimental challenge with Edwardsiella ictaluri, the causative agent of Enteric Septicemia of Catfish, a disease that annually causes widespread economic losses in the catfish industry. These experiential challenges are desig...

  18. Development and evaluation of an acoustic device to estimate size distribution of channel catfish in commercial ponds

    Technology Transfer Automated Retrieval System (TEKTRAN)

    As one step in the continued effort to utilize acoustic methods and techniques to the betterment of catfish aquaculture, an acoustic “catfish sizer” was designed to determine the size distribution of Channel Catfish Ictalurus punctatus in commercial ponds. The catfish sizer employed a custom-built 4...

  19. Miocene Soil Database: Global paleosol and climate maps of the Middle Miocene Thermal Maximum

    NASA Astrophysics Data System (ADS)

    Metzger, C. A.

    2013-12-01

    Paleosols, which record past climatic, biologic, and atmospheric conditions, can be used as a proxy to understand ancient terrestrial landscapes, paleoclimate, and paleoenvironment. In addition, the middle Miocene thermal maximum (~16 Ma) provides an ancient analog for understanding the effects of current and future climate change on soil and ecosystem regimes, as it contains records of shifts similar in magnitude to expected global climate change. The Miocene Soil Database (MSDB) combines new paleosol data from Australia and Argentina with existing and previously uncollated paleosol data from the literature and the Paleobiology Database. These data (n = 507) were then used to derive a paleogeographic map of climatically significant soil types zones during the Middle Miocene. The location of each diagnostic paleosol type (Aridisol, Alfisol, Mollisol, Histosol, Oxisol, and Ultisol) was plotted and compared with the extent of these soil types in the modern environment. The middle Miocene soil map highlights the extension of tropical soils (Oxisols, Ultisols), accompanied by thermophilic flora and fauna, into northern and southern mid-latitudes. Peats, lignites, and Histosols of wetlands were also more abundant at higher latitudes, especially in the northern hemisphere, during the middle Miocene. The paleosol changes reflect that the Middle Miocene was a peak of global soil productivity and carbon sequestration, with replacement of unproductive Aridisols and Gelisols with more productive Oxisols, Alfisols, Mollisols and Histosols. With expansion to include additional data such as soil texture, moisture, or vegetation type, the MSDB has the potential to provide an important dataset for computer models of Miocene climate shifts as well as future land use considerations of soils in times of global change.

  20. Feeding ecology and energetic relationships with habitat of blue catfish, Ictalurus furcatus, and flathead catfish, Pylodictis olivaris, in the lower Mississippi River, U.S.A.

    USGS Publications Warehouse

    Eggleton, M.A.; Schramm, H.L.

    2004-01-01

    We examined feeding of blue catfish, Ictalurus furcatus, and flathead catfish, Pylodictis olivaris, collected from floodplain lake, secondary (side) river channel, and main river channel habitats in the lower Mississippi River (LMR), U.S.A. We described the feeding ecology of two large river catfish species within the context of whether off-channel habitats in the LMR (i.e., floodplain lakes and secondary channels) potentially provided energetic benefits to these fishes as purported in contemporary theory on the ecology of large rivers. We used diet composition and associated caloric densities of prey consumed as indicators of energetic benefit to catfishes. Differences in diet among habitats were strong for blue catfish, but weak for flathead catfish; consumed foods generally differed among habitats in caloric (energy) content. Caloric densities of consumed foods were generally greatest in floodplain lakes, least in the main river channel, and intermediate in secondary river channels. Strong between-year variation in diet was observed, but only for blue catfish. Blue catfish fed disproportionately on lower-energy zebra mussels in the main river channel during 1997, and higher-energy chironomids and oligochaetes in floodplain lakes during 1998. Results suggested that although off-channel habitats potentially provided greater energetic return to catfishes in terms of foods consumed, patterns of feeding and subsequent energy intake may vary annually. Energetic benefits associated with off-channel habitats as purported under contemporary theory (e.g., the 'flood-pulse concept') may not be accrued by catfishes every year in the LMR.

  1. Effect of type and concentration of water hardness on the fertilization and hatching success of channel X blue F1 hybrid catfish eggs

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Consistent and improved performance of channel x blue F1 hybrid catfish fingerlings in production ponds in the US farm raised catfish industry has prompted an increase in demand of hybrid catfish fingerlings even at higher prices compared to commonly raised channel catfish. Hybrid catfish fry are e...

  2. Suspending mammalian LHRHa-injected channel catfish, Ictalurus punctatus in individual nylon-mesh bag reduces stress and improves reproductive performance

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Hormone induced spawning of channel catfish held communally in tanks is a reliable method to produce channel catfish, Ictalurus punctatus ' x blue catfish, I. furcatus ' F1 hybrid catfish fry. However, mature catfish are crowded, and repeatedly handled during the process of induced ovulation. Repe...

  3. El Nino-like events during Miocene

    SciTech Connect

    Casey, R.E.; Nelson, C.O.; Weinheimer, A.L.; Oeth, P.A.; Swanson, R.J.

    1988-03-01

    El Nino-like events have been recorded from the Miocene laminated siliceous facies of the Monterey Formation. These El Nino-like Miocene events are compared to El Nino events recorded from Holocene varved sediments deposited within the anoxic Santa Barbara basin. Strong El Nino events can be recognized from Holocene Santa Barbara basin sediments by increases in radiolarian flux to the sea floor during those events. For the last 100-plus years, frequency of strong El Ninos has been on the order of one extremely strong event about every 100 years, and one easily recognizable event about every 18 years. Frequencies in the laminated (varved) Miocene range from about every 4-5 years to over 20 years. The higher frequencies occur within generally warm intervals and the lower frequencies within generally cold intervals. Perhaps the frequencies of these events may, in fact, be an important indicator in determining whether the intervals were cold or warm. Reconstructions of the paleo-California Current system during El Nino-like periods have been made for the west coast from the Gulf of California to northern California. Strong El Nino-like events occurred 5.5 and 8 Ma, and a strong anti-El Nino-like event occurred at about 6.5 Ma. Evidence from the 5.5 and 8 Ma events combined with other evidence suggests that modern El Ninos, similar to today's, were initiated at 5.5 Ma or earlier.

  4. High-density interspecific genetic linkage mapping provides insights into genomic incompatibility between channel catfish and blue catfish.

    PubMed

    Liu, S; Li, Y; Qin, Z; Geng, X; Bao, L; Kaltenboeck, L; Kucuktas, H; Dunham, R; Liu, Z

    2016-02-01

    Catfish is the leading aquaculture species in the United States. The interspecific hybrid catfish produced by mating female channel catfish with male blue catfish outperform both of their parent species in a number of traits. However, mass production of the hybrids has been difficult because of reproductive isolation. Investigations of genome structure and organization of the hybrids provide insights into the genetic basis for maintenance of species divergence in the face of gene flow, thereby helping develop strategies for introgression and efficient production of the hybrids for aquaculture. In this study, we constructed a high-density genetic linkage map using the hybrid catfish system with the catfish 250K SNP array. A total of 26,238 SNPs were mapped to 29 linkage groups, with 12,776 unique marker positions. The linkage map spans approximately 3240 cM with an average intermarker distance of 0.25 cM. A fraction of markers (986 of 12,776) exhibited significant deviation from the expected Mendelian ratio of segregation, and they were clustered in major genomic blocks across 15 LGs, most notably LG9 and LG15. The distorted markers exhibited significant bias for maternal alleles among the backcross progenies, suggesting strong selection against the blue catfish alleles. The clustering of distorted markers within genomic blocks should lend insights into speciation as marked by incompatibilities between the two species. Such findings should also have profound implications for understanding the genomic evolution of closely related species as well as the introgression of hybrid production programs in aquaculture. PMID:26537786

  5. High-density interspecific genetic linkage mapping provides insights into genomic incompatibility between channel catfish and blue catfish.

    PubMed

    Liu, S; Li, Y; Qin, Z; Geng, X; Bao, L; Kaltenboeck, L; Kucuktas, H; Dunham, R; Liu, Z

    2016-02-01

    Catfish is the leading aquaculture species in the United States. The interspecific hybrid catfish produced by mating female channel catfish with male blue catfish outperform both of their parent species in a number of traits. However, mass production of the hybrids has been difficult because of reproductive isolation. Investigations of genome structure and organization of the hybrids provide insights into the genetic basis for maintenance of species divergence in the face of gene flow, thereby helping develop strategies for introgression and efficient production of the hybrids for aquaculture. In this study, we constructed a high-density genetic linkage map using the hybrid catfish system with the catfish 250K SNP array. A total of 26,238 SNPs were mapped to 29 linkage groups, with 12,776 unique marker positions. The linkage map spans approximately 3240 cM with an average intermarker distance of 0.25 cM. A fraction of markers (986 of 12,776) exhibited significant deviation from the expected Mendelian ratio of segregation, and they were clustered in major genomic blocks across 15 LGs, most notably LG9 and LG15. The distorted markers exhibited significant bias for maternal alleles among the backcross progenies, suggesting strong selection against the blue catfish alleles. The clustering of distorted markers within genomic blocks should lend insights into speciation as marked by incompatibilities between the two species. Such findings should also have profound implications for understanding the genomic evolution of closely related species as well as the introgression of hybrid production programs in aquaculture.

  6. Physiology and immunology of mucosal barriers in catfish (Ictalurus spp.)

    PubMed Central

    Peatman, Eric; Lange, Miles; Zhao, Honggang; Beck, Benjamin H

    2015-01-01

    The mucosal barriers of catfish (Ictalurus spp) constitute the first line of defense against pathogen invasion while simultaneously carrying out a diverse array of other critical physiological processes, including nutrient adsorption, osmoregulation, waste excretion, and environmental sensing. Catfish depend more heavily on mucosal barriers than their terrestrial counterparts as they are continuously interacting with the aquatic microbiota. Our understanding of these barriers, while growing, is still limited relative to that of mammalian model systems. Nevertheless, a combination of molecular and cellular studies in catfish over the last few decades, and particularly within the last few years, has helped to elucidate many of the primary actors and pathways critical to their mucosal health. Here we describe aspects of innate and adaptive immune responses in the primary mucosal tissues (skin, gill, and intestine) of catfish, focusing on mucus-driven responses, pathogen recognition, soluble mediators, and immunoglobulin and T-cell derived immunity. Modulation of mucosal barriers will be critical moving forward for crafting better diets, improving vaccine delivery, enhancing water quality, and ensuring sustainable production practices in catfish. PMID:26716071

  7. Water quality and plankton communities in hybrid catfish (female channel catfish, Ictalurus punctatus x male blue catfish, I. furcatus) ponds after partial fish harvest

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Twelve, 0.4-ha ponds were stocked with 10,000 hybrid catfish fingerlings in March 2015. Six ponds were partially harvested in August to remove fish larger than ~ 0.57 kg. All remaining fish were removed in October and November. Partial harvest of faster-growing fish removed ~26% of fish initially st...

  8. Miocene mass-transport sediments, Troodos Massif, Cyprus

    USGS Publications Warehouse

    Lord, A.R.; Harrison, R.W.; BouDagher-Fadel, M.; Stone, B.D.; Varol, O.

    2009-01-01

    Sediment mass-transport layers of submarine origin on the northern and southern flanks of the Troodos ophiolitic massif are dated biostratigraphically as early Miocene and late Miocene, respectively and therefore represent different seismogenic events in the uplift and erosional history of the Troodos terrane. Analysis of such events has potential for documenting Miocene seismic and uplift events regionally in the context of changing stress field directions and plate vectors through time. ?? 2009 The Geologists' Association.

  9. Stress in African catfish (Clarias gariepinus) following overland transportation.

    PubMed

    Manuel, Remy; Boerrigter, Jeroen; Roques, Jonathan; van der Heul, Jan; van den Bos, Ruud; Flik, Gert; van de Vis, Hans

    2014-02-01

    Of the many stressors in aquaculture, transportation of fish has remained poorly studied. The objective of this study was therefore to assess the effects of a (simulated) commercial transportation on stress physiology of market-size African catfish (Clarias gariepinus). Catfish weighing approximately 1.25 kg were returned to the farm after 3 h of truck-transportation, and stress-related parameters were measured for up to 72 h following return. Recovery from transportation was assessed through blood samples measuring plasma cortisol, glucose and non-esterified fatty acids (NEFA) and gill histology. Also, the number of skin lesions was compared before and after transport. Pre-transport handling and sorting elevated plasma cortisol levels compared to unhandled animals (before fasting). Plasma cortisol levels were further increased due to transportation. In control fish, plasma cortisol levels returned to baseline values within 6 h, whereas it took 48 h to reach baseline values in transported catfish. Plasma glucose and NEFA levels remained stable and were similar across all groups. Transported catfish did not, on average, have more skin lesions than the handling group, but the number of skin lesions had increased compared to unhandled animals. The macroscopic condition of the gills was similar in control, transported and unhandled catfish; however, light microscopy and immunohistochemistry revealed atypical morphology and chloride cell migration normally associated with adverse water conditions. From our data, we conclude that transportation may be considered a strong stressor to catfish that may add to other stressors and thus inflict upon the welfare of the fish.

  10. Miocene mollusks from the Simojovel area in Chiapas, southwestern Mexico

    NASA Astrophysics Data System (ADS)

    del Carmen Perrilliat, María; Vega, Francisco J.; Coutiño, Marco A.

    2010-11-01

    The fauna of gastropods and bivalves from the amber-bearing lithostratigraphic units of the Simojovel area, Chiapas is reported, including the description of two new species and one subspecies: Turbinella maya new species, Melongena corona tzeltal new subspecies and Agladrillia ( Eumetadrillia) vermeiji new species. Stratigraphic affinities of the previously described species suggest an Early Miocene age for the Mazantic Shale, and a Middle Miocene age for the overlying Balumtum Sandstone. One specimen of gastropod, with a relatively large piece of amber attached to the adapertural part of the shell is representative for an Early Miocene age and estuarine paleoenvironmental interpretation for the Mazantic Shale. Mollusca, Miocene, Chiapas, Amber, Mexico.

  11. Effect of paternal blue catfish strain effects on hatchery fry production and performance of channel catfish X blue catfish F1 hybrid fry production and fingerling performance under commercial conditions

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Four hundred four-year old mature Gold Kist strain channel catfish, Ictalurus punctatus were induced to spawn with 10 mg common carp pituitary extract (CPE) /kg BW in 8 spawning trials. The stripped eggs were fertilized with sperm of either D&B or Rio Grande blue catfish, I.furcatus to produce D&B ...

  12. The dietary adaptations of European Miocene catarrhines.

    PubMed Central

    Ungar, P S; Kay, R F

    1995-01-01

    European Miocene "apes" have been known for nearly a century and a half but their phylogenetic significance is only now becoming apparent with the recent discovery of many relatively complete remains. Some appear to be close in time and morphology to the last common ancestor of modern great apes and humans. The current study is an attempt to reconstruct the diets of these fossils on the basis of quantitative data. Results suggest that these primates varied more greatly in their diets than modern apes, with adaptations ranging from hard-object feeding to soft-object frugivory to folivory. PMID:7777533

  13. Mammal extinctions in the Vallesian (Upper Miocene)

    NASA Astrophysics Data System (ADS)

    Agusti, J.; Moya-Sola, S.

    The term Vallesian was created by Crusafont (1950) to designate the first European Mammalian palaeofaunas containing the equid Hipparion, the remainder of the faunas being composed of typical elements coming from the Middle Miocene such as Micromeryx, Euprox, Sansanosmilus, Pseudaelurus, and Listriodon. Thus, the Aragonian-Vallesian boundary does not show a strong change among European Miocene mammalian faunas (Agusti et al., 1984). On the other hand, the Lower Vallesian/Upper Vallesian transition corresponds to a major biotic crisis. This boudnary is characterized by the disappearence of most of the Aragonian artiodactyl forms such as Protragocerus, Miotragocerus, Listriodon, Hyotherium, Parachleusastochoerus, etc. Among the rodents, this crisis affects the family Eomyidae and most of the cricetid and glirid species. On the other hand, a number of eastern elements appear in the area at the same time. This is the case of the suid Schizochoerus and the murid Progonomys. Other eastern forms are Tragoportax, Graecoryx, Adcrocuta, Paramachairodus, Microstonyx, etc. Most of these are typical elements of the next Mammal stage, the Turolian. Thus, whereas the Lower Vallesian fauna has a typical Aragonian composition except for Hipparion. After the Middle Vallesian event, the Upper Vallesian faunas are already largely Turolian in character. The possible factors involved in this extinction event are discussed.

  14. Controlling fungus on channel catfish eggs with peracetic acid

    Technology Transfer Automated Retrieval System (TEKTRAN)

    There is much interest in the use of peracetic acid (PAA) to treat pathogens in aquaculture. It is a relatively new compound and is approved for use in Europe, but not in the United States. This study determined the effectiveness of PAA for fungus control on channel catfish Ictalurus punctatus egg...

  15. Rearing channel catfish in a bioflac production system

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Production of channel catfish in an intensively managed mixed suspended-growth, or biofloc, production system was investigated in two studies. Management of unassimilated feed nitrogen is important as feeding rate is increased in intensified production systems. In a mixed suspended-growth production...

  16. Channel catfish polyculture with fathead minnows or threadfin shad effects on pond plankton communities and catfish fillet flavor, color, and fatty acid composition

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Threadfin shad, Dorosoma petenense, or fathead minnows, Pimephales promelas, were co-cultured with channel catfish, Ictalurus punctatus, in earthen ponds to determine the effects of planktivory on plankton community dynamics and catfish fillet quality. Fathead minnows had no effect on the plankton c...

  17. A molecular organic carbon isotope record of miocene climate changes.

    PubMed

    Schoell, M; Schouten, S; Damsté, J S; de Leeuw, J W; Summons, R E

    1994-02-25

    The difference in carbon-13 ((13)C) contents of hopane and sterane biomarkers in the Monterey formation (Naples Beach, California) parallels the Miocene inorganic record of the change in (18)O (delta(18)O), reflecting the Miocene evolution from a well-mixed to a highly stratified photic zone (upper 100 meters) in the Pacific. Steranes (delta(13)C = 25.4 +/- 0.7 per mil versus the Pee Dee belemnite standard) from shallow photic-zone organisms do not change isotopically throughout the Miocene. In contrast, sulfur-bound C(35) hopanes (likely derived from bacterial plankton living at the base of the photic zone) have systematically decreasing (13)C concentrations in Middle and Late Miocene samples (delta(13)C = -29.5 to -31.5 per mil), consistent with the Middle Miocene formation of a carbon dioxide-rich cold water mass at the base of the photic zone.

  18. Multilocus molecular phylogeny of the suckermouth armored catfishes (Siluriformes: Loricariidae) with a focus on subfamily Hypostominae.

    PubMed

    Lujan, Nathan K; Armbruster, Jonathan W; Lovejoy, Nathan R; López-Fernández, Hernán

    2015-01-01

    The Neotropical catfish family Loricariidae is the fifth most species-rich vertebrate family on Earth, with over 800 valid species. The Hypostominae is its most species-rich, geographically widespread, and ecomorphologically diverse subfamily. Here, we provide a comprehensive molecular phylogenetic reappraisal of genus-level relationships in the Hypostominae based on our sequencing and analysis of two mitochondrial and three nuclear loci (4293bp total). Our most striking large-scale systematic discovery was that the tribe Hypostomini, which has traditionally been recognized as sister to tribe Ancistrini based on morphological data, was nested within Ancistrini. This required recognition of seven additional tribe-level clades: the Chaetostoma Clade, the Pseudancistrus Clade, the Lithoxus Clade, the 'Pseudancistrus' Clade, the Acanthicus Clade, the Hemiancistrus Clade, and the Peckoltia Clade. Results of our analysis, which included type- and non-type species for every valid genus in Hypostominae, support the reevaluation and restriction of several historically problematic genera, including Baryancistrus, Cordylancistrus, Hemiancistrus, and Peckoltia. Much of the deep lineage diversity in Hypostominae is restricted to Guiana Shield and northern Andean drainages, with three tribe-level clades still largely restricted to the Guiana Shield. Of the six geographically widespread clades, a paraphyletic assemblage of three contain lineages restricted to drainages west of the Andes Mountains, suggesting that early diversification of the Hypostominae predated the late Miocene surge in Andean uplift. Our results also highlight examples of trophic ecological diversification and convergence in the Loricariidae, including support for three independent origins of highly similar and globally unique morphological specializations for eating wood.

  19. Comparative susceptibility of channel catfish, blue catfish, and their hybrid cross to experimental challenge with Bolbophorus damnificus (Digenea: Bolbophoridae) cercariae

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The digenetic trematode Bolbophorus damnificus has been implicated in significant losses in catfish aquaculture since the late 1990s. The complex life cycle sequentially involves the American white pelican Pelecanus erythrorhynchos, the marsh rams horn snail Planorbella trivolvis, and Channel Catfis...

  20. Comparative susceptibility of channel catfish, blue catfish and their hybrid cross to experimental challenge with Bolbophorus damnificus (Digenea: Bolbophoridae) cercariae

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The digenetic trematode Bolbophorus damnificus has been implicated in significant losses in catfish aquaculture since the late 1990s. The complex life cycle sequentially involves the American white pelican Pelecanus erythrorhynchos, the marsh rams horn snail Planorbella trivolvis, and Channel Catfis...

  1. Iron status of channel catfish Ictalurus punctatus affected by channel catfish anemia and response to parenteral iron

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Originally reported in 1983, channel catfish anemia (CCA), also ‘white lip’ or ‘no blood,’ is a major idiopathic disease affecting commercial production in the Mississippi Delta region of the USA. Affected individuals are characterized by lethargy, anorexia, extreme pallor, and packed cell volumes o...

  2. Miocene vertebrates and North Florida shorelines

    USGS Publications Warehouse

    Olsen, S.J.

    1968-01-01

    Vertebrate fossils from ten localities, spread across northern Florida, give evidence of shorelines and deltas that have previously been established on geologic evidence or invertebrates alone. Terrestrial mammal remains, in association with shallow-water forms, indicate a deltaic assemblage and in several instances specific animals suggest restricted water depths at the time of sediment deposition. Fortunately diagnostic fragments of Miocene horses, Merychippus and Parahippus, are present in these beds, allowing for a rather close age evaluation of these sediments. Adequate fossil material has been collected from these localities to suggest the past environment and ecological conditions for the forms represented. By utilizing a suggested course of experiments with stream table apparatus it is possible to use the orientation of the fossil vertebrate remains as aids in determining past conditions of sediment accumulation. ?? 1968.

  3. Effects of Feeding Diets With or Without Fish Meal on Production of Channel Catfish, Ictalurus Punctatus, Stocked at Varying Densities

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Animal protein, generally fish meal, has traditionally been used in the diet of channel catfish. However, our previous research indicates that animal protein is not needed for growing stocker size catfish to food fish when the fish are stocked at densities typical of those used in commercial catfish...

  4. Seasonal Differences in Steroids and Maturation-related Genes in Channel Catfish Under Normal and Accelerated Thermoperiods

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Selective breeding of channel catfish, Ictalurus punctatus, is hampered by a long generation time. Female channel catfish typically spawn when they are 3-years-old; however, a low percentage of spawning may be observed at two years of age. Mature female channel catfish can spawn once annually. Their...

  5. Effects of no feeding, maintenance feeding, and refeeding on production and processing characteristics of market-size hybrid catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A pond study was initiated to evaluate effects of no feeding, maintenance feeding, and refeeding on production and processing characteristics of market-size hybrid catfish (female Channel Catfish Ictalurus punctatus × male Blue Catfish I. furcatus). Fish with an average weight of 644 g were stocked ...

  6. Efficiency of baited hoop nets for sampling catfish in southeastern U.S. small impoundments

    USGS Publications Warehouse

    Wallace, Benjamin C.; Weaver, Daniel M.; Kwak, Thomas J.

    2011-01-01

    Many U.S. natural resource agencies stock catfish (Ictaluridae) into small impoundments to provide recreational fishing opportunities. However, effective standardized methods for sampling catfish in small impoundments have not been developed for wide application, particularly in the southeastern United States. We evaluated the efficiency of three bait treatments (i.e., soybean cake, sunflower cake, and no bait) of tandem hoop nets in two North Carolina small impoundments during the fall of 2008 and spring of 2009 in a factorial experimental design. The impoundments were stocked with catchable-size channel catfish Ictalurus punctatus at contrastingly low (5.5 fi sh/ha) and high (90.0 fi sh/ha) rates prior to our sampling. Nets baited with soybean cake consistently sampled more channel catfish than any other treatment. Channel catfish catch ranged as high as 3,251 fi sh per net series during the fall in nets baited with soybean cake in the intensively stocked impoundment and was up to 8.5 and 15.3 times higher during the fall than in the spring in each impoundment. Nets baited with soybean cake sampled significantly (12 and 24 times) more channel catfish than those with no bait in the two impoundments. These trends did not occur among other catfish species. Nonictalurid fish and turtle catch was higher during spring compared to that of fall, corresponding with low channel catfish catches. Our results indicate that tandem hoop nets baited with soybean cake during the fall is a more efficient method for sampling channel catfish compared to nets baited with sunflower cake or no bait in spring or fall. Our findings validate this technique for application in southeastern U.S. small impoundments to assess catfish abundance to guide management and evaluate the success of catfish stocking programs.

  7. In vivo and in vitro CYP1B mRNA expression in channel catfish.

    PubMed

    Willett, Kristine L; Ganesan, Shobana; Patel, Monali; Metzger, Christine; Quiniou, Sylvie; Waldbieser, Geoff; Scheffler, Brian

    2006-07-01

    Our goal was to study the induction of CYP1B mRNA expression in channel catfish (Ictalurus punctatus). CYP1B belongs to the cytochrome P450 superfamily of genes, is involved in the oxidation of endogenous and exogenous compounds, and could potentially be a useful biomarker in fish for exposure to AhR ligands. The full-length catfish CYP1B cDNA is 2417 nt to the polyA tail and encodes a putative protein of 536 amino acids. It has 67% amino acid similarity to carp and zebrafish CYP1B and 68% similarity to carp CYP1B2. Male channel catfish were collected from three Mississippi Delta sites: Lake Roebuck, Itta Bena; Bee Lake, Thornton; and Sunflower River, Indianola. Total RNA was isolated from wild-caught catfish gill, blood, gonad and liver tissues. Quantitative real-time reverse transcriptase PCR was used to determine relative induction of CYP1B in wild catfish compared to laboratory control and BaP-exposed catfish (20mg/kg i.p. after 4 days). BaP exposure significantly induced CYP1B message in blood, gonad, and liver of laboratory catfish. In these same tissues of wild catfish from sites with relatively low sediment contaminants, CYP1B message was not statistically increased relative to laboratory control catfish. CYP1B transcript abundance was higher in gills compared to other tissues in both laboratory and wild catfish. When primary cultured gill cells were treated with increasing concentrations of BaP, TCDD, and PCBs 77, 126 and 169, CYP1B mRNA was induced more than 10-fold while PCB153 and 4,4'DDT did not cause significant CYP1B induction. Our results suggest that catfish CYP1B is induced by the classic AhR ligands. PMID:16697458

  8. An evaluation of agreement between pectoral spines and otoliths for estimating ages of catfishes

    USGS Publications Warehouse

    Olive, J.A.; Schramm, Harold; Gerard, Patrick D.; Irwin, E.

    2011-01-01

    Otoliths have been shown to provide more accurate ages than pectoral spine sections for several catfish populations; but sampling otoliths requires euthanizing the specimen, whereas spines can be sampled non-lethally. To evaluate whether, and under what conditions, spines provide the same or similar age estimates as otoliths, we examined data sets of individual fish aged from pectoral spines and otoliths for six blue catfish Ictalurus furcatus populations (n=420), 14 channel catfish Ictalurus punctatus populations (n=997), and 10 flathead catfish Pylodictus olivaris populations (n=947) from lotic and lentic waters throughout the central and eastern U.S. Logistic regression determined that agreement between ages estimated from otoliths and spines was consistently related to age, but inconsistently related to growth rate. When modeled at mean growth rate, we found at least 80% probability of no difference in spine- and otolith-assigned ages up to ages 4 and 5 for blue and channel catfish, respectively. For flathead catfish, an 80% probability of agreement between spine- and otolith-assigned ages did not occur at any age due to high incidence of differences in assigned ages even for age-1 fish. Logistic regression models predicted at least 80% probability that spine and otolith ages differed by ≤1 year up to ages 13, 16, and 9 for blue, channel, and flathead catfish, respectively. Age-bias assessment found mean spine-assigned age differed by less than 1 year from otolith-assigned age up to ages 19, 9, and 17 for blue catfish, channel catfish, and flathead catfish, respectively. These results can be used to help guide decisions about which structure is most appropriate for estimating catfish ages for particular populations and management objectives.

  9. SNP discovery in wild and domesticated populations of blue catfish, Ictalurus furcatus, using genotyping-by-sequencing and subsequent SNP validation

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Blue catfish, Ictalurusfurcatus, are valued in the United States as a trophy fishery for their capacity to reach large sizes, sometimes exceeding 45 kg. Additionally blue catfish x channel catfish (I. punctatus) hybrid food fish production has recently increased the demand for blue catfish broodsto...

  10. Relative effectiveness of carp pituitary extract, luteinizing hormone releasing hormone analog LHRHa injections and LHRHa implants for producing hybrid catfish fry

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Adoption of the hybrid catfish (channel catfish, Ictalruus punctatus, female x blue catfish, I. furcatus, male) is increasing in the catfish industry. The most effective way to produce fry is hormone induced spawning of females coupled with hand stripping and in vitro fertilization. The success of...

  11. Energy Costs of Catfish Space Use as Determined by Biotelemetry

    PubMed Central

    Slavík, Ondřej; Horký, Pavel; Závorka, Libor

    2014-01-01

    Animals use dispersed resources within their home range (HR) during regular day-to-day activities. The high-quality area intensively used by an individual, where critical resources are concentrated, has been designated as the core area (CA). This study aimed to describe how animals utilize energy in the HR and CA assuming that changes would occur according to the size of the used areas. We observed energetic costs of space use in the largest European freshwater predator catfish, Silurus glanis, using physiological sensors. Catfish consumed significantly more energy within the CA compared to the rest of the HR area. In addition, energetic costs of space use within a large area were lower. These results generally indicate that utilization of larger areas is related to less demanding activities, such as patrolling and searching for new resources and mates. In contrast, fish occurrence in small areas appears to be related to energetically demanding use of spatially limited resources. PMID:24896256

  12. Production of enzymatic protein hydrolysates from freshwater catfish (Clarias batrachus)

    NASA Astrophysics Data System (ADS)

    Seniman, Maizatul Sarah Md; Yusop, Salma Mohamad; Babji, Abdul Salam

    2014-09-01

    Fish protein hydrolysate (FPH) was prepared from freshwater catfish (Clarias batrachus) by using Alcalase® 2.4L and Papain. The effect of hydrolysis time (30, 60, 120, 180 min) with enzyme concentration of 1% (v/w substrate); pH = 8.0, 7.0 was studied to determine the degree of hydrolysis (DH), peptide content, proximate composition and amino acid profile. Results showed that the highest DH of Alcalase and Papain FPH were 58.79% and 53.48% after 180 min at 55°C incubation respectively. The peptide content of both FPH increased as hydrolysis time increases. FPH showed higher crude protein content and lower fat, moisture and ash content compared to raw catfish. The major amino acids of both hydrolysates were Glu, Lys and Asp. Content of essential amino acids of Alcalase and Papain hydrolysates were 44.05% and 43.31% respectively.

  13. DNA damage and radiocesium in channel catfish from Chernobyl

    SciTech Connect

    Sugg, D.W.; Brooks, J.A.; Jagoe, C.H.; Smith, M.H.; Chesser, R.K.; Bickham, J.W.; Lomakin, M.D.; Dallas, C.E.; Baker, R.J.

    1996-07-01

    The explosion of the Chernobyl Nuclear Power Plant resulted in some of the most radioactively contaminated habitats on earth. Despite evacuation of all human inhabitants from the most contaminated areas, animals and plants continue to thrive in these areas. This study examines the levels of contamination and genetic damage associated with cesium-137 in catfish (Ictalurus punctatus) from the cooling pond and a control site. In general, catfish from the cooling pond exhibit greater genetic damage, and the amount of damage is related to the concentration of radiocesium in individual fish. Genetic damage is primarily in the form of DNA strand breaks, with few micronuclei being observed in contaminated fish. The possible roles that acclimation and adaption play in the response to high levels of radiation exposure are discussed.

  14. Geographic and stratigraphic distribution of Miocene palynomorphs in north Idaho

    NASA Astrophysics Data System (ADS)

    Jorstad, R. B.

    1983-02-01

    Acetolysis of Early and Middle Miocene sediments from the Clarkia, Idaho, area yielded 3,477 palynomorphs representing 37 taxa from eighteen samples for assemblage analysis. Relative pollen frequency data from various study sites suggest an older Coniferae-Mixed Dicotyledoneae-Pteridophyte Palynomorph Assemblage Zone, and a younger Fagaceae-TCT-Platanus Pollen Assemblage Zone. Two pollen based chronostratigraphic stages are proposed for at least part of the Miocene epoch: an older Clarkian Stage, and a younger Oviattian Stage. Palynomorph stratigraphic range charts document the youngest regional occurrence of Lygodium. Two palynomorph taxa are possible index fossils in the Pacific Northwest: (1) Sigmopollis (Incertae Sedis) for the Oligocene, and (2) Elaeagnus (Elaeagnaceae) for the Late Oligocene-Early Miocene. Palynostratigraphic and assemblage analyses of the fossil bearing sediments confirms prior models for the infilling of Miocene Clarkia Lake, and a regional change from a warm temperature to temperate climate.

  15. Disposition of 1-naphthol in the channel catfish (Ictalurus punctatus)

    USGS Publications Warehouse

    Stehly, G.R.; Plakas, S.M.

    1992-01-01

    The pharmacokinetics, tissue distribution, and metabolism of 1-naphthol were examined in the channel catfish (Ictalurus punctatus ). After oral dosing, peak plasma concentrations of 1-naphthol occurred at 1 hr; parent compound made up less than 15% of the total radioactivity, and the bioavailability was 32%. Plasma protein binding was 92% and was independent of concentration. 1-Naphthol and metabolites were rapidly eliminated from the tissues after oral dosing.

  16. Bioaccumulation of P-32 in bluegill and catfish

    SciTech Connect

    Kahn, B.; Turgeon, K.S.; Martini, D.K.; Dunkerly, S.J.; El-Shinawy, R.M.K.; Wilson, M.D.; Hammond, R.A.; Uribe, R.; Mizner, A.A.

    1985-02-01

    Bluegill and catfish were fed P-32 at a constant feeding rate per body weight to determine the bioaccummulation factor (BF/sub r/) for P-32 in muscle relative to water. The fish were maintained in flow-through tanks at two feeding levels. The bluegill accumulated P-32 for 51 days, followed by depuration for 28 days. The catfish study had to be teminated after 11 days. Fish were analyzed in triplicte for P-32 and phosphorus at intervals of 1 to 8 days. Additional aquaria experiments were performed to determine the effects of water temperature, feeding rate, and type of food (worms vs. pellets) on P-32 uptake, and to observe P-32 uptake from water by unfed fish (including fish with blocked esophagus). A simple calculational model was used to determine the phosphorus turnover constant from the specific activity in tissue relative to food. This ratio at steady state approaches the BF/sub r/BF ratio (where BF is the phosphorus bioaccumulation factor) if P-32 transfers rapidly from water to food. The bluegill showed a weight gain of 0.2 %/d, a phosphorous turnover constant in muscle of 0.43 %/d, and a BF/sub r//BF ratio of 0.081 at the higher feeding rate, and 0.05 %/d, 0.34 %/d, and 0.064 at the lower feeding rate. Hence, respective P-32 BF/sub r/ values are 6000 and 4000 at a phosphorus BF of 70,000. The BF/sub r/ values for catfish were approximately twice as high. The aquarium experiments suggest that the higher factors are due to a much higher phosphorus intake, higher water temperature, higher retention from pellets than from worms, and possible higher retention by catfish than bluegill under the same conditions. 36 references, 15 figures, 22 tables.

  17. Wet Winters in the Eastern Siberian Arctic during the Miocene

    NASA Astrophysics Data System (ADS)

    Schubert, B.; Jahren, H.; Davydov, S. P.

    2015-12-01

    Eastern Siberia (a 7.3 million km2 area, similar to Australia in size) features numerous plant fossil localities, many with spectacularly preserved Neogene fossils (e.g., Baekovo and Nekkeiveem; Khapchan-Timmerdekh; Mamontova Gora). Although these sites have been described in full using classical methods (e.g., Baranova and Grinenko, 1989; Baranova et al., 1970; Biske, 1970; Dorofeev, 1969; Grinenko et al., 1989; Nikitin, 2006, 2007), geochemical proxy techniques have not yet been applied. Here we report the first stable isotope analyses of fossil wood from northeastern Siberia: 512 high-resolution intra-ring analyses of carbon isotopes (IRA-δ13C) in 6 specimens of Miocene wood from the Finish Creek site, located near Cherskiy, Sakha Republic, Russia. Using our model for reconstructing the ratio of summer to winter precipitation (Ps/Pw) from IRA-δ13C (Schubert and Jahren, 2011, GCA), we quantified the seasonal precipitation in far northeastern Siberia (~69 oN) during the Miocene. Although the median value for Ps/Pw during the Miocene was similar to today (Ps/Pw = ~2), we observed much greater variability in Ps/Pw during the Miocene than today. Specifically, years with Ps/Pw < 1/2 occurred ~4 times more frequently during the Miocene than today. When taken with independent estimates of mean annual precipitation based on nearest living relatives (581 to 1206 mm; Popova et al., 2012), our Miocene values for Ps/Pw suggest at least 2.8 times greater winter precipitation during the Miocene relative to today, and at least 5.5 times greater winter precipitation than today in ~10% of years sampled (6-month winter precipitation averages ~70 mm/yr today). Our result differentiates the Siberian Arctic Miocene from the Canadian Arctic Eocene which featured wet summers in the Eocene Arctic of Canada using similar methods, highlighting spatial and temporal variability in the Arctic paleoclimate record of the middle Cenozoic.

  18. Pectoral sound generation in the blue catfish Ictalurus furcatus.

    PubMed

    Mohajer, Yasha; Ghahramani, Zachary; Fine, Michael L

    2015-03-01

    Catfishes produce pectoral stridulatory sounds by "jerk" movements that rub ridges on the dorsal process against the cleithrum. We recorded sound synchronized with high-speed video to investigate the hypothesis that blue catfish Ictalurus furcatus produce sounds by a slip-stick mechanism, previously described only in invertebrates. Blue catfish produce a variably paced series of sound pulses during abduction sweeps (pulsers) although some individuals (sliders) form longer duration sound units (slides) interspersed with pulses. Typical pulser sounds are evoked by short 1-2 ms movements with a rotation of 2°-3°. Jerks excite sounds that increase in amplitude after motion stops, suggesting constructive interference, which decays before the next jerk. Longer contact of the ridges produces a more steady-state sound in slides. Pulse pattern during stridulation is determined by pauses without movement: the spine moves during about 14 % of the abduction sweep in pulsers (~45 % in sliders) although movement appears continuous to the human eye. Spine rotation parameters do not predict pulse amplitude, but amplitude correlates with pause duration suggesting that force between the dorsal process and cleithrum increases with longer pauses. Sound production, stimulated by a series of rapid movements that set the pectoral girdle into resonance, is caused by a slip-stick mechanism.

  19. Otavipithecus namibiensis, first Miocene hominoid from southern Africa.

    PubMed

    Conroy, G C; Pickford, M; Senut, B; Van Couvering, J; Mein, P

    1992-03-12

    We report here the discovery of a Miocene hominoid from Berg Aukas, Namibia, the first known from the African continent south of equatorial East Africa. This represents a major range extension of Miocene Hominoidea in Africa to latitude 20 degrees S. The holotype, a right mandibular corpus preserving the crowns of the P4-M3, partial crown and root of the P3, partial root of the canine, alveoli for all four incisors, and partial alveolus for the left canine, was found during paleontological explorations of karst-fill breccias in the Otavi region of northern Namibia. The mandible has unique characteristics that differentiate it from other middle Miocene hominoids of Africa and Eurasia and represents the only fossil evidence documenting a pre-australopithecine stage of hominoid evolution in southern Africa. Faunal analyses indicate that the breccia block containing the specimen accumulated during the latter part of the middle Miocene, about 13 +/- 1 Myr. Fauna from other breccia blocks at Berg Aukas are of diverse ages, including the earlier part of the middle Miocene, the upper Miocene, Plio-Pleistocene and Holocene. PMID:1545864

  20. Draft genome sequences of four virulent aeromonas hydrophila strains from catfish aquaculture

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Since 2009, a clonal group of virulent Aeromonas hydrophila (VAh) strains has been causing severe disease in the catfish aquaculture industry in the Southeastern United States. Here, we report draft genomes of four A. hydrophila isolates from catfish aquaculture that represent this clonal group....

  1. Molecular Cloning, Expression and Genome Organization of Channel Catfish (Ictalurus punctatus) Matrix Metalloproteinase-9

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In the course of studying pathogenesis of enteric septicemia of catfish, we noted that channel catfish matrix metalloproteinase-9 (MMP-9) gene was up-regulated after Edwardsiella ictaluri infection. In this study, we cloned, sequenced using the RACE (rapid amplification of cDNA ends) method and cha...

  2. Genomic Organization of channel catfish, Ictalurus punctatus, matrix metalloproteinase-9-gene

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In the course of studying pathogenesis of enteric septicemia of catfish, we noted that channel catfish matrix metalloproteinase-9 (MMP-9) gene was up-regulated after Edwardsiella ictaluri infection. In this study, we cloned and sequenced MMP-9 genomic DNA by using a Unversal GenomeWalker kit. The co...

  3. Performance evaluation of intensive, pond-based culture systems for catfish production in Mississippi: year one

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Catfish farming is the leading form of aquaculture in the U.S. and has a significant economic impact in the southern states. Increased feed and energy costs, and competition from foreign imports have recently caused catfish farmers to intensify production as a means of improving efficiency and profi...

  4. Draft Genome Sequences of Four Virulent Aeromonas hydrophila Strains from Catfish Aquaculture.

    PubMed

    Tekedar, Hasan C; Kumru, Salih; Karsi, Attila; Waldbieser, Geoffrey C; Sonstegard, Tad; Schroeder, Steven G; Liles, Mark R; Griffin, Matt J; Lawrence, Mark L

    2016-01-01

    Since 2009, a clonal group of virulent Aeromonas hydrophila strains has been causing severe disease in the catfish aquaculture industry in the southeastern United States. Here, we report draft genomes of four A. hydrophila isolates from catfish aquaculture that represent this clonal group.

  5. Evaluation of Catfish Skin Hydrolysates as a Glazing Material for Air-Blast Frozen Shrimp

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Catfish is one of the most widely consumed seafood in the United States. A by-product of this consumption is a large quantity of catfish skin (CS), approximately 8,200 metric tons in 2014. Enzymatic hydrolysis is used to produce protein hydrolysates from the skin. These hydrolysates have considerabl...

  6. Biofloc production technology promising in temperate zones – Channel catfish perform during winter months

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A study was conducted to assess the feasibility to grow Channel catfish (Ictalurus punctatus) in an outdoor biofloc system during winter in a temperate zone. High biomasses of market-size channel catfish were successfully maintained through the winter with high survival and in good condition in both...

  7. Molecular Cloning and Sequencing of Hemoglobin-Beta Gene of Channel Catfish, Ictalurus Punctatus Rafinesque

    Technology Transfer Automated Retrieval System (TEKTRAN)

    : Hemoglobin-y gene of channel catfish , lctalurus punctatus, was cloned and sequenced . Total RNA from head kidneys was isolated, reverse transcribed and amplified . The sequence of the channel catfish hemoglobin-y gene consists of 600 nucleotides . Analysis of the nucleotide sequence reveals one o...

  8. Plasma polar lipid profiles of channel catfish with different growth rates

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Increased growth in channel catfish is an economically important trait and has been used as a criterion for the selection and development of brood fish. Selection of channel catfish toward increased growth usually results in the accumulation of large amounts of fats in their abdomen rather than incr...

  9. Zebrafish (Danio rerio) bioassay for visceral toxicosis of catfish and botulinum neurotoxin serotype E

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Visceral toxicosis of catfish (VTC), a sporadic disease of cultured channel catfish (Ictalurus punctatus) often with high mortality, is caused by botulinum neurotoxin serotype E (BoNT/E). Presumptive diagnosis of VTC is based on characteristic clinical signs and lesions, and the production of these ...

  10. Population characteristics of channel catfish near the northern edge of their distribution: implications for management

    USGS Publications Warehouse

    Carter-Lynn, K. P.; Quist, Michael

    2015-01-01

    Channel catfish, Ictalurus punctatus (Rafinesque), populations in six lakes in northern Idaho, USA, were sampled to describe their population characteristics. During the summers of 2011 and 2012, 4864 channel catfish were sampled. Channel catfish populations had low to moderate catch rates, and length structure was dominated by fish <400 mm. Channel catfish were in good body condition. All populations were maintained by stocking age-1 or age-2 fish. Growth of fish reared in thermally enriched environments prior to stocking was fast compared to other North American channel catfish populations. After stocking, growth of channel catfish declined rapidly. Once stocked, cold water temperatures, prey resources and (or) genetic capabilities limited growth. Total annual mortality of age 2 and older channel catfish was generally <40%. Tag returns indicated that angler exploitation was low, varying from 0 to 43% among lakes. This research provides insight on factors regulating channel catfish population dynamics and highlights important considerations associated with their ecology and management.

  11. Destiny-yield relationship for channel catfish reared in a biofloc technology production system

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The effect of stocking density on yield of stocker channel catfish and water quality in a biofloc technology production system was studied in this completely randomized design experiment. Fingerling channel catfish (Ictalurus punctatus; 48.0 g/fish, 17.8 cm/fish) were stocked into nine continuously ...

  12. Effects of Bio-Mos on growth and survival of channel catfish challenged with Edwardsiella ictaluri

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Research examined the effects of Bio-Mos on growth and disease resistance in channel catfish. Catfish were fed either a Con-Sink (36% crude protein (CP) diet) or Bio-Mos-Sink (36% CP diet with Bio-Mos supplemented at 2 g/kg) sinking pellet for 6 wks. followed by an E. ictaluri challenge. Growth pe...

  13. Improved survival in channel catfish fed mannanoligosaccharides in an extruded diet

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Research examined the effects of extrusion temperature on the efficacy of mannanoligosaccharide (Bio-Mos) in channel catfish grown for 9 wks and then challenged with virulent Edwardsiella ictaluri. Seven hundred and fifty catfish (10.3 ± 0.3 g) were randomly assigned to six treatments with five rep...

  14. Effects of Bio-Mos on Growth and Survival of Channel Catfish Challenged with Edwardsiella ictaluri

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A major problem in the catfish farming industry has been high disease loss to enteric septicemia of catfish (ESC), caused by the bacterium Edwardsiella ictaluri (E. ictaluri). Methods to control this disease include antibiotic therapy, vaccinations, and management strategies such as taking the fish...

  15. The use of copper sulfate in catfish hatcheries: safety and effectiveness

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Copper sulfate (CuSO4) is cheap, safe to the applicator and effective for controlling fungus on catfish eggs. Several studies were designed to determine the effectiveness and safety of CuSO4 to channel catfish eggs in pursuit of an FDA approval. In an effectiveness study for the FDA, we found that ...

  16. Effect of Increased Egg Stocking Density in Existing and Experimental Catfish Incubators

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel catfish egg masses are typically incubated in stationary wire mesh baskets suspended across metal troughs with flow-through water that is agitated and circulated between the baskets and around the eggs with rotating paddles. A limiting factor in the successful incubation of channel catfish e...

  17. The see-saw a vertical-lift incubator designed for channel catfish egg masses

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel catfish egg masses are typically incubated in baskets that are suspended in water that is agitated with rotating or oscillating paddles. We designed and tested a new vertical-lift incubator (the “See-Saw”) to incubate channel catfish egg masses. Preliminary research in commercial hatcheries...

  18. Variation in response of channel catfish to Henneguya sp. infections (Protozoa: Myxosporidea).

    PubMed

    McCraren, J P; Landolt, M L; Hoffman, G L; Meyer, F P

    1975-01-01

    Infections in channel catfish (Ictalurus punctatus, Rafinesque) induced by the sporozoan Henneguya (Protozoa: Myxosporidea) result in seven known and diverse disease manifestations. Most outstanding is an interlamellar branchial form responsible for significant losses among immature catfish, and a unique papillomatous form. The question of whether or not the species of Henneguya involved in these cases is H. exilis remains to be resolved. PMID:803577

  19. Performance of a temperate-zone channel catfish biofloc technology production system during winter

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel catfish (Ictalurus punctatus) have been grown successfully in an outdoor biofloc technology production system. Outdoor biofloc production systems in the tropics are operated year-round, whereas the channel catfish studies were conducted only during the growing season and biofloc production t...

  20. Infection and disease progress of motile Aeromonas septicemia caused by virulent Aeromonas hydrophila in channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Motile Aeromonas septicemia (MAS), caused by virulent clonal isolates of Aeromonas hydrophila (vAh), is emerging as a major disease in channel catfish (Ictalurus punctatus) aquaculture in the Southeastern United States. Predisposing conditions leading to vAh infection in catfish were however largely...

  1. Statistical approaches to optimize detection of MIB off-flavor in aquaculture raised channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The catfish industry prides itself on preventing inadvertent sale of off-flavor fish. Typically, several fish are taste tested over several weeks before pond harvest to confirm good fish flavor quality. We collected several data sets of analytically measured off-flavor concentrations in catfish to...

  2. Effects of metomindate hydrochloride and tricaine methanesulfonate on the short term cortisol response in channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The effects of metomidate hydrochloride and tricaine methanesulfonate (MS-222) on cortisol stress response of channel catfish, Ictalurus punctatus, were examined during 10 minutes of sedation. Channel catfish were assigned to three treatments: 1. Metomidate hydrochloride (12.5 mg/L), 2. MS-222 (100...

  3. Remediation of uranium-contaminated groundwater by sorption onto hydoxyapatite derived from catfish bones

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Hydroxyapatite was prepared from catfish bones, called catfish hydroxyapatite (CFHA), by mechanical and chemical treatment methods and was characterized by x-ray diffraction (X-RD) and scanning electron microscope (SEM) techniques to confirm the presence of hydroxyapatite. The ability of CFHA to rem...

  4. Draft Genome Sequences of Four Virulent Aeromonas hydrophila Strains from Catfish Aquaculture

    PubMed Central

    Tekedar, Hasan C.; Kumru, Salih; Karsi, Attila; Waldbieser, Geoffrey C.; Sonstegard, Tad; Schroeder, Steven G.; Liles, Mark R.; Griffin, Matt J.

    2016-01-01

    Since 2009, a clonal group of virulent Aeromonas hydrophila strains has been causing severe disease in the catfish aquaculture industry in the southeastern United States. Here, we report draft genomes of four A. hydrophila isolates from catfish aquaculture that represent this clonal group. PMID:27540076

  5. Characterization of anti-channel catfish MHC class II monoclonal antibodies

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This study characterizes four monoclonal antibodies (mAb) developed against the major histocompatibility complex (MHC) class II beta chain of the channel catfish, Ictalurus punctatus. Immunoprecipitations using catfish clonal B cells revealed that each of these mAbs immunoselected proteins of appro...

  6. The late Miocene Panama isthmian strait

    NASA Astrophysics Data System (ADS)

    Collins, Laurel S.; Coates, Anthony G.; Berggren, William A.; Aubry, Marie-Pierre; Zhang, Jijun

    1996-08-01

    Miocene sediments of the Caribbean Gatun and Chagres formations, Panama Canal basin, were deposited within an archipelagic strait that connected Caribbean and Pacific waters. Shallow-water (˜ 25 m) benthic foraminifera of the Gatun Formation have a strong Caribbean affinity, indicating that a significant interoceanic, biogeographic barrier had formed at ˜ 8 Ma. However, benthic foraminifera of the overlying Chagres Formation are bathyal and markedly Pacific in affinity, indicating that at ˜ 6 Ma, waters of the Panama isthmian strait deepened to ˜ 200 500 m and Pacific bathyal waters flowed into the Caribbean. The Chagres Formation crops out at the Caribbean entrance to the Panama Canal in a large wedge of cross-laminated sandstone and coquina. The cross-laminations and coarse grain size indicate high-energy currents atypical of bathyal settings. We infer that a jet of the Pacific North Equatorial Countercurrent Equatorial Undercurrent passed through the Panama isthmian strait to deposit these sediments on the Caribbean side. This later entry of Pacific taxa into the Caribbean had no apparent effect on the subsequent composition of Caribbean faunas.

  7. Allopolyploidy, diversification, and the Miocene grassland expansion

    PubMed Central

    Estep, Matt C.; McKain, Michael R.; Vela Diaz, Dilys; Zhong, Jinshun; Hodge, John G.; Hodkinson, Trevor R.; Layton, Daniel J.; Malcomber, Simon T.; Pasquet, Rémy; Kellogg, Elizabeth A.

    2014-01-01

    The role of polyploidy, particularly allopolyploidy, in plant diversification is a subject of debate. Whole-genome duplications precede the origins of many major clades (e.g., angiosperms, Brassicaceae, Poaceae), suggesting that polyploidy drives diversification. However, theoretical arguments and empirical studies suggest that polyploid lineages may actually have lower speciation rates and higher extinction rates than diploid lineages. We focus here on the grass tribe Andropogoneae, an economically and ecologically important group of C4 species with a high frequency of polyploids. A phylogeny was constructed for ca. 10% of the species of the clade, based on sequences of four concatenated low-copy nuclear loci. Genetic allopolyploidy was documented using the characteristic pattern of double-labeled gene trees. At least 32% of the species sampled are the result of genetic allopolyploidy and result from 28 distinct tetraploidy events plus an additional six hexaploidy events. This number is a minimum, and the actual frequency could be considerably higher. The parental genomes of most Andropogoneae polyploids diverged in the Late Miocene coincident with the expansion of the major C4 grasslands that dominate the earth today. The well-documented whole-genome duplication in Zea mays ssp. mays occurred after the divergence of Zea and Sorghum. We find no evidence that polyploidization is followed by an increase in net diversification rate; nonetheless, allopolyploidy itself is a major mode of speciation. PMID:25288748

  8. Calcareous Nannofossil Evolution Vs. Climatic Evolution In The Miocene

    NASA Astrophysics Data System (ADS)

    Raffi, I.; Backman, J.; Ciummelli, M.

    2013-12-01

    Miocene times were characterized by major changes in ocean circulation and global climate that were driven by a complex set of factors operating on tectonic, orbital and suborbital timescales (Zachos et al., 2001). This time dependent development of Miocene paleo-environmental conditions is reflected in the distribution and evolutionary patterns, often expressed in terms of biostratigraphic resolution, among the dominant sediment-forming oceanic plankton groups (Kennett & Srinivasan, 1983; Baldauf & Barron, 1990; Perch-Nielsen, 1985) including calcareous nannofossils. In the Miocene through Pleistocene interval, calcareous nannofossil evolutionary appearances or extinctions provide eight biostratigraphically useful biohorizons between 23 Ma and 14 Ma, giving an average rate of 1.5 biohorizon per million years. In the next following eight million years (14-5 Ma), the number of biohorizons are 29 (3.6 biohorizons/million years), representing well over a doubling of the rate of taxonomic evolution among open ocean calcareous nannofossils compared with that of the early half of the Miocene. This observation demonstrates that a distinct evolutionary response to climatic evolution throughout the Miocene, specifically to changing conditions in the photic zone of the middle and late Miocene oceans. This assumption is supported by the behavior of some nannofossil groups, in particular by the representatives of the genus Discoaster, a key group that gives nearly half (14 of 29) of biohorizons in the younger half of the Miocene. The Discoaster's environmental distribution and abundance may provide some information about the complex interaction between climatic evolution and biotic evolution in the plankton realm.

  9. Miocene sequence biostratigraphy of the northern Gulf of Mexico

    SciTech Connect

    Jiang, M.M. )

    1993-09-01

    The Miocene floral pulse model of Jiang and Watkins is revised. The new revision suggests that the Gulf of Mexico Miocene floral pulses, corresponding to the traditional foraminiferal tops, are transgression surfaces of the fourth-order sequences. These pulses show diverse magnitudes and when they are plotted on a depth (or time) tract, their relative magnitudes show an orderly wavy pattern comparable to the Haq et al.'s third-order cycles in the Miocene. After iterative comparison, the condensed intervals of these Miocene third-order sequences have been determined as, in descending order, Cyclammina 3, the second Cibicides carstensi, the second Textularia W, Cristellaria I, Robulus 43, Discorbis B, the third Marginulina A, and Textularia panamensis (= fauna unit II). The least prominent pulses suggesting the third-order cycle highstands (or shelf-margin wedges) are suggested as, in descending order, Textularia X, Bolivina thalmanni, Globorotalia fohsi robusta, Bigenerina humblei, Cibicides opima, Saracenaria schencki, Marginulina A (= second Robulus chambersi), and Siphonina davisi. Redeposited Cretaceous nanno species are an important component in the Gulf of Mexico middle and lower Miocene. Significant concentrations of these species are found primarily in the third-order cycle highstands, one exception being the Marginulina A third-order cycle highstand that in the High Island and West Cameron areas contained only rare redeposited Cretaceous nannos.

  10. A molecular organic carbon isotope record of miocene climate changes

    SciTech Connect

    Schoell, M. ); Schouten, S.; Sinninghe Damste', J.S.; Leeuw, J.W. de ); Summons, R.E. )

    1994-02-25

    The difference in carbon-13 ([sup 13]C) contents of hopane and sterane biomarkers in the Monterey formation (Naples Beach, California) parallels the Miocene inorganic record of the change in [sup 18]O ([delta][sup 18]O), reflecting the Miocene evolution from a well-mixed to a highly stratified photic zone (upper 100 meters) in the Pacific. Steranes ([delta][sup 13]C = 25.4 [+-] 0.7 per mil versus the Pee Dee belemnite standard) from shallow photic-zone organisms do not change isotopically throughout the Miocene. In contrast, sulfur-bound C[sub 35] hopanes (likely derived from bacterial plankton living at the base of the photic zone) have systematically decreasing [sup 13]C concentrations in Middle and Late Miocene samples ([delta][sup 13]C = 29.5 to [minus]31.5 per mil), consistent with the Middle Miocene formation of a carbon dioxide-rich cold water mass at the base of the photic zone.

  11. DNA barcoding of commercially important catfishes in the Philippines.

    PubMed

    Quilang, Jonas P; Yu, Shiny Cathlynne S

    2015-06-01

    Many species of catfish are important resources for human consumption, for sport fishing and for use in aquarium industry. In the Philippines, some species are cultivated and some are caught in the wild for food and a few introduced species have become invasive. In this study, DNA barcoding using the mitochondrial cytochrome c oxidase I (COI) gene was done on commercially and economically important Philippine catfishes. A total of 75 specimens belonging to 11 species and 5 families were DNA barcoded. The genetic distances were computed and Neighbor-Joining (NJ) trees were constructed based on the Kimura 2-Parameter (K2P) method. The average K2P distances within species, genus, family and order were 0.2, 8.2, 12.7 and 21.9%, respectively. COI sequences clustered according to their species designation for 7 of the 11 catfishes. DNA barcoding was not able to discriminate between Arius dispar and A. manillensis and between Pterygoplichthys disjunctivus and P. pardalis. The morphological characters that are used to distinguish between these species do not complement molecular identification through DNA barcoding. DNA barcoding also showed that Clarias batrachus from the Philippines is different from the species found in India and Thailand, which supports earlier suggestions based on morphology that those found in India should be designated as C. magur and those in mainland Southeast Asia as C. aff. batrachus "Indochina". This study has shown that DNA barcoding can be used for species delineation and for tagging some species for further taxonomic investigation, which has implications on proper management and conservation strategies.

  12. Miocene-Oligocene sequence stratigraphy of the Malay Basin

    SciTech Connect

    Lovell, R.; Elias, M.R. ); Hill, R.E.; Feeley, M.H. )

    1994-07-01

    The Malay Basin has experienced extension of the Eocene ( ) through Oligocene, sag in the early Miocene, and compression in the middle Miocene through Pliocene-Pleistocene. The interaction of structurally induced and glacial-eustatic accommodation changes has resulted in complex, interrelated play elements, including multiple reservoirs, diverse nonmarine sources, discontinuous migration pathways, and thin seals. Extensional subbasins were filled with braided streams, associated coastal plain, lacustrine deltas, and thick lake shales (groups M-K). This initial rift fill comprises an overall second order progradational cycle punctuated by 3rd-order cycles. These 3rd-order cycles are capped by thick, source-rich, lacustrine shale packages. The lower Miocene section (groups I and J) consists of progradational to aggradational fluvial to tidally-dominated estuarine sands. Hydrocarbons are generated from interbedded coals and other coal-related lithologies.

  13. Chad Basin: Paleoenvironments of the Sahara since the Late Miocene

    NASA Astrophysics Data System (ADS)

    Schuster, Mathieu; Duringer, Philippe; Ghienne, Jean-François; Roquin, Claude; Sepulchre, Pierre; Moussa, Abderamane; Lebatard, Anne-Elisabeth; Mackaye, Hassan Taisso; Likius, Andossa; Vignaud, Patrick; Brunet, Michel

    2009-08-01

    Since the mid 1990s, the Mission paléoanthropologique francotchadienne (MPFT) conducts yearly paleontological field investigations of the Miocene-Pliocene of the Chad Basin. This article synthesizes some of the results of the MPFT, with focus on the Chad Basin development during the Neogene. We propose an overview of the depositional paleoenvironments of this part of Africa at different scales of time and space, based on a multidisciplinary approach (sedimentary geology, geomorphology, geophysic, numerical simulations and geochronology). The Miocene-Pliocene paleoenvironments are examined through the sedimentary archives of the early hominids levels and the Holocene Lake Mega-Chad episode illustrates the last major paleoenvironmental change in this area. The sedimentary record of the Chad Basin since the Late Miocene can be schematized as the result of recurrent interactions from lake to desert environments.

  14. Sublethal effects of malathion on channel catfish, Ictalurus punctatus

    SciTech Connect

    Areechon, N.; Plumb, J.A. )

    1990-03-01

    Malathion (O,O-dimethyl-S-1, 2-di-(ethoxycarbamyl)ethyl phosphorodithioate) is an organophosphate which is a widely used pesticide in the United States. This pesticide seems to be more toxic to insects and fish than to mammals due to the lack of hydrolytic enzymes in insects and fish. Malathion clearly affects the hematology of fish. The study reported here was designed to determine the effects of a commercially available malathion solution on channel catfish Ictalurus punctatus. Objectives were to measure hematological changes and histopathological effects of a sublethal concentration of malathion on the fish.

  15. Early, middle, and late Miocene basin development, California

    SciTech Connect

    Bachman, S.B.

    1988-03-01

    Contrary to earlier models of progressive basin development related to northward migration of the Mendocino triple junction, it can now be documented that the major basins of coastal California developed at about the same time in the late Oligocene to early Miocene. This basin development is marked by rapid deepening of basin floors, subsequent changes in depositional facies from nonmarine and shallow marine to deep marine, and widespread volcanism dated at 23-20 Ma. The coastal basins likely formed by rifting and subsidence linked to the proximity of the Farallon-pacific spreading ridge and the subduction of hot young oceanic crust, but cannot be correlated to any existing models of triple junction migration. Indeed, strike-slip restored positions of the coastal basins at their inception indicate that the basins were spread out over about 800 km of the southern coast of California. The Miocene basins were likely larger than the present coastal basins, although their configurations are obscured by late Neogene faulting and erosion. It is likely, however, that paleohighs separated at least some of the margin into proximal and distal basins. With local exceptions, structuring in the Miocene basins was primarily extensional, with widespread strike-slip and thrust tectonics restricted mainly to latest Miocene and younger events. Plate reconstructions suggest several hundred kilometers of transform motion occurred along the California margin during the Miocene, but there is only limited evidence of this movement in the known history of either the basins or the major faults of California. Sedimentation during the Miocene was controlled by both oceanic conditions (biogenic component) and the relative abundance of clastic input. The clastic input was controlled by a combination of proximal vs distal basinal positions, eustatic sea level changes, and local tectonics.

  16. Interpretation of Samburupithecus, an upper Miocene hominoid from Kenya

    NASA Astrophysics Data System (ADS)

    Pickford, Martin; Ishida, Hidemi

    1998-02-01

    Samburupithecus, an extinct great ape from upper Miocene (9.5 Ma) deposits in Kenya, is compared with other fossil and extant hominoids. It possesses features which are derived in comparison with Proconsul and other Lower and Middle Miocene hominoids, but it has none of the derived features which characterize the Eurasian large apes. It possesses characters which indicate that its closest relationships lie with the AAH clade (extant African apes and man). Within this clade it is closest dentally to primitive hominids such as Praeanthropus.

  17. Plastic debris ingestion by marine catfish: an unexpected fisheries impact.

    PubMed

    Possatto, Fernanda E; Barletta, Mário; Costa, Monica F; do Sul, Juliana A Ivar; Dantas, David V

    2011-05-01

    Plastic marine debris is a pervasive type of pollution. River basins and estuaries are a source of plastics pollution for coastal waters and oceans. Estuarine fauna is therefore exposed to chronic plastic pollution. Three important catfish species [Cathorops spixii (N=60), Cathorops agassizii (N=60) and Sciades herzbergii (N=62)] from South Western Atlantic estuaries were investigated in a tropical estuary of the Brazilian Northeast in relation to their accidental ingestion of plastic marine debris. Individuals from all three species had ingested plastics. In C. spixii and C. agassizii, 18% and 33% of individuals had plastic debris in their stomachs, respectively. S. herzbergii showed 18% of individuals were contaminated. All ontogenetic phases (juveniles, sub-adults and adults) were contaminated. Nylon fragments from cables used in fishery activities (subsistence, artisanal and commercial) played a major role in this contamination. These catfish spend their entire life cycles within the estuary and are an important feeding resource for larger, economically important, species. It is not yet possible to quantify the scale and depth of the consequences of this type of pollution. However, plastics are well known threat to living resources in this and other estuaries. Conservation actions will need to from now onto take plastics pollution into consideration.

  18. Soft dentin results in unique flexible teeth in scraping catfishes.

    PubMed

    Geerinckx, Tom; Huysseune, Ann; Boone, Matthieu; Claeys, Myriam; Couvreur, Marjolein; De Kegel, Barbara; Mast, Peter; Van Hoorebeke, Luc; Verbeken, Kim; Adriaens, Dominique

    2012-01-01

    Teeth are generally used for actions in which they experience mainly compressive forces acting toward the base. The ordered tooth enamel(oid) and dentin structures contribute to the high compressive strength but also to the minor shear and tensile strengths. Some vertebrates, however, use their teeth for scraping, with teeth experiencing forces directed mostly normal to their long axis. Some scraping suckermouth catfishes (Loricariidae) even appear to have flexible teeth, which have not been found in any other vertebrate taxon. Considering the mineralized nature of tooth tissues, the notion of flexible teeth seems paradoxical. We studied teeth of five species, testing and measuring tooth flexibility, and investigating tooth (micro)structure using transmission electron microscopy, staining, computed tomography scanning, and scanning electron microscopy-energy-dispersive spectrometry. We quantified the extreme bending capacity of single teeth (up to 180°) and show that reorganizations of the tooth (micro)structure and extreme hypomineralization of the dentin are adaptations preventing breaking by allowing flexibility. Tooth shape and internal structure appear to be optimized for bending in one direction, which is expected to occur frequently when feeding (scraping) under natural conditions. Not all loricariid catfishes possess flexible teeth, with the trait potentially having evolved more than once. Flexible teeth surely rank among the most extreme evolutionary novelties in known mineralized biological materials and might yield a better understanding of the processes of dentin formation and (hypo)mineralization in vertebrates, including humans.

  19. Apparent phosphorus availabilities of selected traditional and alternative feedstuffs for channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A digestibility trial with channel catfish Ictalurus punctatus was conducted to determine apparent availability coefficients (AACs) of phosphorus for selected common feedstuffs: soybean meal, cottonseed meal, wheat middlings, corn gluten feed (CGF), and corn distillers dried grains with solubles (DD...

  20. Short-term feed deprivation alters immune status of surface mucosa in channel catfish (Ictalurus punctatus)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Short-term feed deprivation (or fasting) is a common occurrence in aquacultured fish species whether due to season, production strategies, or disease. In channel catfish (Ictalurus punctatus) fasting impacts susceptibility to several bacterial pathogens including Flavobacterium columnare, the causat...

  1. Comparative metabolism of benzo[a]pyrene by liver microsomes of channel catfish and brown bullhead

    SciTech Connect

    Yuan, Z.X.; Kumar, S.; Sikka, H.C.

    1997-04-01

    The authors investigated the metabolism of the carcinogen benzo[a]pyrene (BaP) by liver microsomes of channel catfish (Ictalurus punctatus) and brown bullhead (Ameiurus nebulosus) pretreated with 3-methylcholanthrene. The catfish liver microsomes metabolized BaP at a considerably lower rate than did the brown bullhead liver microsomes. Although the BaP metabolites produced by the liver microsomes of the two species were qualitatively similar, there were considerable differences in the relative proportions of individual metabolites formed. The catfish liver microsomes produced a considerably lower proportion of benzo-ring diols of BaP including BaP-7,8-diol (the proximate carcinogenic metabolite of BaP) than did the bullhead liver microsomes. Compared to the bullhead liver microsomes, the catfish microsomes converted a higher proportion of BaP to phenolic metabolites.

  2. Chronic pathology and longevity of Drepanocephalus spathans infections in juvenile channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Drepanocephalus spathans (Digenea: Echinostomatidae) is a common parasite of the double-crested cormorant (Phalacrocorax auritus). The cercariae of D. spathans have been shown infective to juvenile channel catfish (Ictalurus punctatus). The developing metacercariae concentrate in the cranial regio...

  3. Identification of potential genetic markers for improved growth rate in channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Identification of genetic polymorphism associated with muscle growth would improve selection efficiency of channel catfish broodstock. Because faster growth is typically associated with increased food intake, factors involved in food intake regulation may serve as potential gene markers for selecti...

  4. Two New Mylagaulid Rodents from the Early Miocene of China

    PubMed Central

    Lu, Xiaoyu; Ni, Xijun; Li, Lüzhou; Li, Qiang

    2016-01-01

    Mylagaulid fossorial rodents are a common component of North American Miocene fossil faunas. However outside of North America, only three species are known from Asia. Here we report two new mylagaulids, Irtyshogaulus minor gen. et sp. nov. and Irtyshogaulus major gen. et sp. nov., recovered from early Miocene sediments in the Junggar Basin in northwestern China. The two new taxa are small-sized, high-crowned promylagauline rodents. Their lower molars possess high metastylid crests, small mesostylids, broad and posterolingually expanded labial inflections, and transversely extending metalophid IIs. The mesoconid is absent in both species. The anterior and posterior fossettids are large and equally developed. Their upper M1-2s possess a square occlusal surface with five deep fossettes. The two new taxa are distinguished from each other mainly by their size, the morphology of fossettes and fossettids, development of mesial and distal lophs, posterior reduction of M3, and the orientation of m2 hypolophid. Our phylogenetic analysis indicates that Irtyshogaulus and Lamugaulus (another early Miocene Asian mylagaulid) are sister taxa. The two genera are nested among the North American promylagaulines, and share a common ancestor from North America, indicating early Miocene intercontinental dispersal within this clade of rodents. PMID:27486803

  5. A Transitional Gundi (Rodentia: Ctenodactylidae) from the Miocene of Israel.

    PubMed

    López-Antoñanzas, Raquel; Gutkin, Vitaly; Rabinovich, Rivka; Calvo, Ran; Grossman, Aryeh

    2016-01-01

    We describe a new species of gundi (Rodentia: Ctenodactylidae: Ctenodactylinae), Sayimys negevensis, on the basis of cheek teeth from the Early Miocene of the Rotem Basin, southern Israel. The Rotem ctenodactylid differs from all known ctenodactylid species, including Sayimys intermedius, which was first described from the Middle Miocene of Saudi Arabia. Instead, it most resembles Sayimys baskini from the Early Miocene of Pakistan in characters of the m1-2 (e.g., the mesoflexid shorter than the metaflexid, the obliquely orientated hypolophid, and the presence of a strong posterolabial ledge) and the upper molars (e.g., the paraflexus that is longer than the metaflexus). However, morphological (e.g., presence of a well-developed paraflexus on unworn upper molars) and dimensional (regarding, in particular, the DP4 and M1 or M2) differences between the Rotem gundi and Sayimys baskini distinguish them and testify to the novelty and endemicity of the former. In its dental morphology, Sayimys negevensis sp. nov. shows a combination of both the ultimate apparition of key-characters and incipient features that would be maintained and strengthened in latter ctenodactylines. Thus, it is a pivotal species that bridges the gap between an array of primitive ctenodactylines and the most derived, Early Miocene and later, gundis.

  6. The lithostratigraphy of Miocene series from Tunisia, revisited

    NASA Astrophysics Data System (ADS)

    Mannaï-Tayech, Beya

    2009-06-01

    In the Mediterranean region, the Miocene is a rather particular tectonic, eustatic and climatic epoch. In Tunisia, the complex distribution of the sedimentary sequences has been controlled by the interaction of these factors. These sequences are composed mostly of silici-clastic packages filling usually rim-syncline, graben and half-graben basins. In the absence of a solid biostratigraphic framework, the dating and correlation of certain formations are not yet clearly perceived. In spite of the availability of some elements of dating (planktonic foraminifera, vertebrates), the solution remains as a whole unclear. The question thus remains as to the significance of the frequency and occurrence of discontinuities, and consequently of those hiatuses between Miocene Formations. Thus, in the light of the recent palynologic, sedimentological and vertebrate biostratigraphical data, a new reading of the paleogeography and paleoenvironment of the Miocene from Tunisia is essential. In this work, the results of multi-field studies supported by the compilation of the literature, enable sensible discussion of the proposed ages, analyze the depositional environments, and concomitantly support correlations between the Miocene Formations recognized to the South-East of the Eastern Dorsale of Tunisia. It is demonstrated that the Beglia and Saouaf Formations are partially equivalent rather than being superposed, as it has been previously surmised. A new, marine formation, the "Kef Ettir Formation", is also proposed.

  7. A Transitional Gundi (Rodentia: Ctenodactylidae) from the Miocene of Israel

    PubMed Central

    López-Antoñanzas, Raquel; Gutkin, Vitaly; Rabinovich, Rivka; Calvo, Ran; Grossman, Aryeh

    2016-01-01

    We describe a new species of gundi (Rodentia: Ctenodactylidae: Ctenodactylinae), Sayimys negevensis, on the basis of cheek teeth from the Early Miocene of the Rotem Basin, southern Israel. The Rotem ctenodactylid differs from all known ctenodactylid species, including Sayimys intermedius, which was first described from the Middle Miocene of Saudi Arabia. Instead, it most resembles Sayimys baskini from the Early Miocene of Pakistan in characters of the m1-2 (e.g., the mesoflexid shorter than the metaflexid, the obliquely orientated hypolophid, and the presence of a strong posterolabial ledge) and the upper molars (e.g., the paraflexus that is longer than the metaflexus). However, morphological (e.g., presence of a well-developed paraflexus on unworn upper molars) and dimensional (regarding, in particular, the DP4 and M1 or M2) differences between the Rotem gundi and Sayimys baskini distinguish them and testify to the novelty and endemicity of the former. In its dental morphology, Sayimys negevensis sp. nov. shows a combination of both the ultimate apparition of key-characters and incipient features that would be maintained and strengthened in latter ctenodactylines. Thus, it is a pivotal species that bridges the gap between an array of primitive ctenodactylines and the most derived, Early Miocene and later, gundis. PMID:27049960

  8. A Transitional Gundi (Rodentia: Ctenodactylidae) from the Miocene of Israel.

    PubMed

    López-Antoñanzas, Raquel; Gutkin, Vitaly; Rabinovich, Rivka; Calvo, Ran; Grossman, Aryeh

    2016-01-01

    We describe a new species of gundi (Rodentia: Ctenodactylidae: Ctenodactylinae), Sayimys negevensis, on the basis of cheek teeth from the Early Miocene of the Rotem Basin, southern Israel. The Rotem ctenodactylid differs from all known ctenodactylid species, including Sayimys intermedius, which was first described from the Middle Miocene of Saudi Arabia. Instead, it most resembles Sayimys baskini from the Early Miocene of Pakistan in characters of the m1-2 (e.g., the mesoflexid shorter than the metaflexid, the obliquely orientated hypolophid, and the presence of a strong posterolabial ledge) and the upper molars (e.g., the paraflexus that is longer than the metaflexus). However, morphological (e.g., presence of a well-developed paraflexus on unworn upper molars) and dimensional (regarding, in particular, the DP4 and M1 or M2) differences between the Rotem gundi and Sayimys baskini distinguish them and testify to the novelty and endemicity of the former. In its dental morphology, Sayimys negevensis sp. nov. shows a combination of both the ultimate apparition of key-characters and incipient features that would be maintained and strengthened in latter ctenodactylines. Thus, it is a pivotal species that bridges the gap between an array of primitive ctenodactylines and the most derived, Early Miocene and later, gundis. PMID:27049960

  9. Age and growth of flathead catfish, Pylodictus olivaris rafinesque, in the Altamaha River system, Georgia

    USGS Publications Warehouse

    Grabowski, T.B.; Isely, J.J.; Weller, R.R.

    2004-01-01

    Flathead catfish were introduced to the Altamaha River system, Georgia in the 1970's. We determined the length-weight relationship, Von Bertalanffy growth parameters, and back calculated lengths by examining the sagittal otoliths of 331 individuals captured from this population. We found that there were no sex related differences in length weight relationship or Von Bertalanffy growth parameters. Flathead catfish in the Altamaha River system grow at about the same rate as individuals in other introduced populations.

  10. The early to mid-Miocene environment of Antarctica

    NASA Astrophysics Data System (ADS)

    Ashworth, A. C.; Lewis, A.

    2012-12-01

    Paleoecological studies in the Transantarctic Mountains of the McMurdo region provide evidence that the climate was both warmer and wetter in the early to mid-Miocene than it was during the late Miocene. The climate change was accompanied by a shift from wet- to cold-based glaciation in the TAM and the probable growth of the polar ice sheet. Terrestrial and freshwater aquatic fossil assemblages from the Friis Hills (77°S) and the Olympus Range (77°S), with endpoint 40Ar/39Ar ages on tephras of 19.76 Ma and 14.07 Ma, respectively, indicate climatic cooling during the interval. At c.14 Ma, the temperature dropped below the threshold required to support the plants and insects of a tundra biome, and they became extinct. This interpretation is supported by pollen studies from Ross Sea cores. The extinction of the tundra biota on the continent appears to have been time-transgressive, occurring at 12.8 Ma on the Antarctic Peninsula. Evidence of climatic cooling from early to mid-Miocene is based on a decrease in biodiversity. During interglacial phases of the early Miocene, the poorly drained valley of the Friis Hills supported a sexually-reproducing moss community dominated by Campylium cf. polygamum, which today grows on the margins of lakes and in soil between boulders. Wood and leaves of Nothofagus (Southern Beech), and the seeds of at least five other angiosperm species are preserved as fossils. In addition, there are abundant megaspores and spiny, curved leaves of the aquatic lycopod Isoetes (Quillwort), as well as chitinous remains of curculionid beetles and Chironomidae (midges). During glacial phases, the only fossils found are Nothofagus leaves of a species which appears to be different than that associated with the interglacial phases. Pollen supports the interpretation that there was more than one species of Nothofagus in the vegetation. The types and numbers of species indicate that the vegetation was a shrub tundra. The closest modern analog for the fossil

  11. A new pitheciin primate from the middle Miocene of Argentina.

    PubMed

    Kay, R F; Johnson, D; Meldrum, D J

    1998-01-01

    We report here a new fossil primate from the middle Miocene of Argentina. The material consists of isolated teeth, mandibular fragments, and a talus. The fossils were collected in the Collón Cura formation at Cañadón del Tordillo in Neuquén Province. An age of 15.71 +/- 0.07 Ma has been reported for the Pilcaniyeu Ignimbrite, which lies just below the paleosols in which the fossils were found. This material is thus the youngest occurrence of fossil primates in Argentina (hitherto documented in the Santacrucian and older land mammal ages) but still is older than the middle Miocene platyrrhine primates from La Venta, Colombia, in particular the pitheciins Nuciruptor and Cebupithecia. The material is recognized as a new genus and species of Pitheciinae, Propithecia neuquenensis. The mesiodistally compressed, high-crowned incisors are specialized and similar to species in the tribe Pithecini and to the nonpitheciin Soriacebus (early Miocene, Patagonia). We rule out a phylogenetic relationship to the latter because of differences in molar morphology. Propithecia does, however, fit well into the pattern of pitheciin evolution, being more derived than the middle Miocene pitheciin Nuciruptor but not as much as another middle Miocene taxon, Cebupithecia. As such, this makes Propithecia the oldest taxon that can be confidently placed within this modern New World monkey subfamily. By analogy with the molar structures and diets of extant platyrrhines, Propithecia has a molar structure consistent with a variety of low-fiber diets ranging from fruit and gum to seeds. Its incisors suggest seed-eating in much the same way as extant pitheciins, like Pithecia. The talus resembles that of Callicebus, suggesting arboreal quadrupedal locomotion. PMID:9702279

  12. Droughts in the Miocene of the Black Sea region

    NASA Astrophysics Data System (ADS)

    Vasiliev, Iuliana; Reichart, Gert-Jan; Grothe, Arjen; Krijgsman, Wout

    2016-04-01

    Since Miocene the Black Sea has been highly sensitive to fluctuations in the hydrological cycle. These fluctuations were principally determined by Black Sea's recurrently restricted connections to the Open Ocean and by its specific paleogeographic location between the dry Mediterranean domain and more humid higher northern latitudes. To determine the nature of changes in the hydrological budget of the Black Sea occurring during the late Miocene we use compound-specific hydrogen isotope ratios on terrestrial and aquatic biomarkers extracted from two different locations: 1) the sedimentary succession of Zhelezniy Rog land based section of Taman in Russia and 2) the deep sea sedimentary succession recovered in 1975 from the Black Sea (DSDP 42B, Hole 380A). The carbon and hydrogen isotopic composition of n-alkanes as well as alkenones and palynology indicate large environmental changes in the Black Sea and/or in the sources of the water entering the Black Sea during the late Miocene. The hydrogen isotopes of alkenones, showing an enrichment of more than 80 ‰ at the end of the Miocene, imply a major shift in basin hydrology, possibly resulting in severely increased salinity. These changes in hydrogen isotopic composition of the alkenones concur both with sharp shifts in reconstructed sea surface temperature and palynological assemblages. Two intervals with negative water budget were identified, most likely caused by enhanced evaporation. The older and longer dry/evaporative phase predates the Maeotian/Pontian boundary (regional stages) at ~6.1 Ma. The younger negative water budget phase is partly coeval to the Messinian salinity crisis of Mediterranean. Both shifts to highly evaporative conditions are recorded in both Taman Peninsula (Russia) and DSDP 42B 380A locations. These recurrent dryer phases were, most likely, the result of important hydrological changes over a significantly larger area around the Black Sea area during the upper Miocene.

  13. A new pitheciin primate from the middle Miocene of Argentina.

    PubMed

    Kay, R F; Johnson, D; Meldrum, D J

    1998-01-01

    We report here a new fossil primate from the middle Miocene of Argentina. The material consists of isolated teeth, mandibular fragments, and a talus. The fossils were collected in the Collón Cura formation at Cañadón del Tordillo in Neuquén Province. An age of 15.71 +/- 0.07 Ma has been reported for the Pilcaniyeu Ignimbrite, which lies just below the paleosols in which the fossils were found. This material is thus the youngest occurrence of fossil primates in Argentina (hitherto documented in the Santacrucian and older land mammal ages) but still is older than the middle Miocene platyrrhine primates from La Venta, Colombia, in particular the pitheciins Nuciruptor and Cebupithecia. The material is recognized as a new genus and species of Pitheciinae, Propithecia neuquenensis. The mesiodistally compressed, high-crowned incisors are specialized and similar to species in the tribe Pithecini and to the nonpitheciin Soriacebus (early Miocene, Patagonia). We rule out a phylogenetic relationship to the latter because of differences in molar morphology. Propithecia does, however, fit well into the pattern of pitheciin evolution, being more derived than the middle Miocene pitheciin Nuciruptor but not as much as another middle Miocene taxon, Cebupithecia. As such, this makes Propithecia the oldest taxon that can be confidently placed within this modern New World monkey subfamily. By analogy with the molar structures and diets of extant platyrrhines, Propithecia has a molar structure consistent with a variety of low-fiber diets ranging from fruit and gum to seeds. Its incisors suggest seed-eating in much the same way as extant pitheciins, like Pithecia. The talus resembles that of Callicebus, suggesting arboreal quadrupedal locomotion.

  14. Effects of Endosulfan on Predator-Prey Interactions Between Catfish and Schistosoma Host Snails.

    PubMed

    Monde, Concillia; Syampungani, Stephen; Van den Brink, Paul J

    2016-08-01

    The effect of the pesticide endosulfan on predator-prey interactions between catfish and Schistosoma host snails was assessed in static tank experiments. Hybrid catfish (Clarias gariepinus × C. ngamensis) and Bulinus globosus were subjected to various endosulfan concentrations including an untreated control. The 48- and 96-h LC50 values for catfish were 1.0 and <0.5 µg/L, respectively, whereas the 48- and 96-h LC50 values for snails were 1137 and 810 µg/L. To assess sublethal effects on the feeding of the catfish on B. globosus, endosulfan concentrations between 0.03 and 1.0 µg/L were used. Predation was significantly greater (p < 0.001) in control tanks than in all other treatments. There was progressively decreasing predation with increasing toxicant concentration. Biological control of Schistosoma host snails using fish may be affected in endosulfan-polluted aquatic systems of Southern Africa because it has been found present at concentrations that are indicated to cause lethal effects on the evaluated hybrid catfish and to inhibit the predation of snails by this hybrid catfish. PMID:27033099

  15. The channel catfish genome sequence provides insights into the evolution of scale formation in teleosts

    PubMed Central

    Liu, Zhanjiang; Liu, Shikai; Yao, Jun; Bao, Lisui; Zhang, Jiaren; Li, Yun; Jiang, Chen; Sun, Luyang; Wang, Ruijia; Zhang, Yu; Zhou, Tao; Zeng, Qifan; Fu, Qiang; Gao, Sen; Li, Ning; Koren, Sergey; Jiang, Yanliang; Zimin, Aleksey; Xu, Peng; Phillippy, Adam M.; Geng, Xin; Song, Lin; Sun, Fanyue; Li, Chao; Wang, Xiaozhu; Chen, Ailu; Jin, Yulin; Yuan, Zihao; Yang, Yujia; Tan, Suxu; Peatman, Eric; Lu, Jianguo; Qin, Zhenkui; Dunham, Rex; Li, Zhaoxia; Sonstegard, Tad; Feng, Jianbin; Danzmann, Roy G.; Schroeder, Steven; Scheffler, Brian; Duke, Mary V.; Ballard, Linda; Kucuktas, Huseyin; Kaltenboeck, Ludmilla; Liu, Haixia; Armbruster, Jonathan; Xie, Yangjie; Kirby, Mona L.; Tian, Yi; Flanagan, Mary Elizabeth; Mu, Weijie; Waldbieser, Geoffrey C.

    2016-01-01

    Catfish represent 12% of teleost or 6.3% of all vertebrate species, and are of enormous economic value. Here we report a high-quality reference genome sequence of channel catfish (Ictalurus punctatus), the major aquaculture species in the US. The reference genome sequence was validated by genetic mapping of 54,000 SNPs, and annotated with 26,661 predicted protein-coding genes. Through comparative analysis of genomes and transcriptomes of scaled and scaleless fish and scale regeneration experiments, we address the genomic basis for the most striking physical characteristic of catfish, the evolutionary loss of scales and provide evidence that lack of secretory calcium-binding phosphoproteins accounts for the evolutionary loss of scales in catfish. The channel catfish reference genome sequence, along with two additional genome sequences and transcriptomes of scaled catfishes, provide crucial resources for evolutionary and biological studies. This work also demonstrates the power of comparative subtraction of candidate genes for traits of structural significance. PMID:27249958

  16. The channel catfish genome sequence provides insights into the evolution of scale formation in teleosts.

    PubMed

    Liu, Zhanjiang; Liu, Shikai; Yao, Jun; Bao, Lisui; Zhang, Jiaren; Li, Yun; Jiang, Chen; Sun, Luyang; Wang, Ruijia; Zhang, Yu; Zhou, Tao; Zeng, Qifan; Fu, Qiang; Gao, Sen; Li, Ning; Koren, Sergey; Jiang, Yanliang; Zimin, Aleksey; Xu, Peng; Phillippy, Adam M; Geng, Xin; Song, Lin; Sun, Fanyue; Li, Chao; Wang, Xiaozhu; Chen, Ailu; Jin, Yulin; Yuan, Zihao; Yang, Yujia; Tan, Suxu; Peatman, Eric; Lu, Jianguo; Qin, Zhenkui; Dunham, Rex; Li, Zhaoxia; Sonstegard, Tad; Feng, Jianbin; Danzmann, Roy G; Schroeder, Steven; Scheffler, Brian; Duke, Mary V; Ballard, Linda; Kucuktas, Huseyin; Kaltenboeck, Ludmilla; Liu, Haixia; Armbruster, Jonathan; Xie, Yangjie; Kirby, Mona L; Tian, Yi; Flanagan, Mary Elizabeth; Mu, Weijie; Waldbieser, Geoffrey C

    2016-01-01

    Catfish represent 12% of teleost or 6.3% of all vertebrate species, and are of enormous economic value. Here we report a high-quality reference genome sequence of channel catfish (Ictalurus punctatus), the major aquaculture species in the US. The reference genome sequence was validated by genetic mapping of 54,000 SNPs, and annotated with 26,661 predicted protein-coding genes. Through comparative analysis of genomes and transcriptomes of scaled and scaleless fish and scale regeneration experiments, we address the genomic basis for the most striking physical characteristic of catfish, the evolutionary loss of scales and provide evidence that lack of secretory calcium-binding phosphoproteins accounts for the evolutionary loss of scales in catfish. The channel catfish reference genome sequence, along with two additional genome sequences and transcriptomes of scaled catfishes, provide crucial resources for evolutionary and biological studies. This work also demonstrates the power of comparative subtraction of candidate genes for traits of structural significance. PMID:27249958

  17. Effects of nutrient enrichment on channel catfish growth and consumption in Mount Storm Lake, West Virginia

    USGS Publications Warehouse

    Blanc, T.J.; Margraf, F.J.

    2002-01-01

    With the objective of augmenting fish production in Mount Storm Lake, Virginia Electric and Power Company initiated a programme of phosphorus addition to increase primary production, and ultimately, channel catfish (Ictaturus punctatus) growth in the 486 ha cooling reservoir. We simulated channel catfish growth dynamics using two bioenergetics modelling scenarios: (i) effects of average reservoir temperature on growth, conversion efficiency and consumption; and (ii) effects of reservoir enrichment on growth, which is simulated by increasing feeding rates. During 1991-1993, fish were sampled monthly, but sampling was increased to every 2 weeks during the peak growing season (June-September). Most of the channel catfish collected were aged 0 year and aged 1 year with rapid annual growth rates ranging from 9.0 to 13.7 J/g. We found many age 1 250-300 mm catfish, but few beyond this size. Conversion efficiency (joules gained/joules consumed) was low at approximately 18-19%. High algae consumption (40%) was evident, but consumption of zooplankton and Asiatic clam (Corbicula sp.) increased over the study. Simulated increased feeding rates showed that channel catfish were food limited in summer and fall (July-December). Weight gains with 5 and 10% feeding increases were 6-13% and 18-38%, respectively, from the baseline. Catfish of all sizes should benefit from phosphorus additions.

  18. A New Late Miocene Odobenid (Mammalia: Carnivora) from Hokkaido, Japan Suggests Rapid Diversification of Basal Miocene Odobenids.

    PubMed

    Tanaka, Yoshihiro; Kohno, Naoki

    2015-01-01

    The modern walrus, Odobenus rosmarus, is specialized and only extant member of the family Odobenidae. They were much more diversified in the past, and at least 16 genera and 20 species of fossil walruses have been known. Although their diversity increased in the late Miocene and Pliocene (around 8-2 Million years ago), older records are poorly known. A new genus and species of archaic odobenid, Archaeodobenus akamatsui, gen. et sp. nov. from the late Miocene (ca. 10.0-9.5 Ma) top of the Ichibangawa Formation, Hokkaido, northern Japan, suggests rapid diversification of basal Miocene walruses. Archaeodobenus akamatsui is the contemporaneous Pseudotaria muramotoi from the same formation, but they are distinguishable from each other in size and shape of the occipital condyle, foramen magnum and mastoid process of the cranium, and other postcranial features. Based on our phylogenetic analysis, A. akamatsui might have split from P. muramotoi at the late Miocene in the western North Pacific. This rapid diversification of the archaic odobenids occurred with a combination of marine regression and transgression, which provided geological isolation among the common ancestors of extinct odobenids. PMID:26244784

  19. A New Late Miocene Odobenid (Mammalia: Carnivora) from Hokkaido, Japan Suggests Rapid Diversification of Basal Miocene Odobenids

    PubMed Central

    Tanaka, Yoshihiro; Kohno, Naoki

    2015-01-01

    The modern walrus, Odobenus rosmarus, is specialized and only extant member of the family Odobenidae. They were much more diversified in the past, and at least 16 genera and 20 species of fossil walruses have been known. Although their diversity increased in the late Miocene and Pliocene (around 8–2 Million years ago), older records are poorly known. A new genus and species of archaic odobenid, Archaeodobenus akamatsui, gen. et sp. nov. from the late Miocene (ca. 10.0–9.5 Ma) top of the Ichibangawa Formation, Hokkaido, northern Japan, suggests rapid diversification of basal Miocene walruses. Archaeodobenus akamatsui is the contemporaneous Pseudotaria muramotoi from the same formation, but they are distinguishable from each other in size and shape of the occipital condyle, foramen magnum and mastoid process of the cranium, and other postcranial features. Based on our phylogenetic analysis, A. akamatsui might have split from P. muramotoi at the late Miocene in the western North Pacific. This rapid diversification of the archaic odobenids occurred with a combination of marine regression and transgression, which provided geological isolation among the common ancestors of extinct odobenids. PMID:26244784

  20. A New Late Miocene Odobenid (Mammalia: Carnivora) from Hokkaido, Japan Suggests Rapid Diversification of Basal Miocene Odobenids.

    PubMed

    Tanaka, Yoshihiro; Kohno, Naoki

    2015-01-01

    The modern walrus, Odobenus rosmarus, is specialized and only extant member of the family Odobenidae. They were much more diversified in the past, and at least 16 genera and 20 species of fossil walruses have been known. Although their diversity increased in the late Miocene and Pliocene (around 8-2 Million years ago), older records are poorly known. A new genus and species of archaic odobenid, Archaeodobenus akamatsui, gen. et sp. nov. from the late Miocene (ca. 10.0-9.5 Ma) top of the Ichibangawa Formation, Hokkaido, northern Japan, suggests rapid diversification of basal Miocene walruses. Archaeodobenus akamatsui is the contemporaneous Pseudotaria muramotoi from the same formation, but they are distinguishable from each other in size and shape of the occipital condyle, foramen magnum and mastoid process of the cranium, and other postcranial features. Based on our phylogenetic analysis, A. akamatsui might have split from P. muramotoi at the late Miocene in the western North Pacific. This rapid diversification of the archaic odobenids occurred with a combination of marine regression and transgression, which provided geological isolation among the common ancestors of extinct odobenids.

  1. Mid Miocene Terrestrial Ecosystems: Information from Mammalian Herbivore Communities.

    NASA Astrophysics Data System (ADS)

    Janis, C. M.; Damuth, J.; Theodor, J. M.

    2001-05-01

    In present day ecosystems the numbers and proportions of different kinds of ecologically distinct ungulates (hoofed mammals) provide an indicator of the nature of the vegetation in the habitat. Different vegetation types (such as forest, savanna, or grassland) are characteristically associated with different arrays of ungulates, with species exhibiting differences in diet, body size, and type of digestive fermentation system. These biological attributes can also be inferred for fossil ungulate species, the first two from quantitative assessment of skull and dental anatomy, and the last from phylogenetic affinity. Thus fossil ungulate communities may be used as indicators of the vegetation types of the habitats in which they lived. Vegetation types, in turn, are determined largely by a number of physical environmental factors. Typical ungulate communities of the late early to early middle Miocene (17 - 15 Ma) from the Great Plains of North America contained a diversity of browsing (leaf-eating) and grazing (grass-eating) species, with proportions of dietary types and a diversity of body sizes indicative of a woodland savanna habitat. Paleobotanical evidence also indicates a woodland savanna type of vegetation. However, these communities included a much larger number of ungulate species than can be found in any present-day community. The "excess" ungulate species were primarily browsers. Throughout the rest of the middle Miocene both species numbers and the proportion of browsers in ungulate communities appear to have declined steadily. During this decline in browser species the numbers of grazer species remained relatively constant. Within-community species numbers comparable to the present day were attained by the late Miocene. We suggest that the early Miocene browser-rich communities, and their subsequent decline, carry an important paleoenvironmental signal. In particular, communities "over rich" in browsers may reflect higher levels of primary productivity in

  2. Effect of stocking biomass on solids, phytoplankton communities, common off-flavors, and production parameters in a channel catfish biofloc technology production system

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The effect of initial channel catfish (Ictalurus punctatus, Rafinesque, 1818) fingerling biomass (1.4, 1.8, or 2.3 kg m-3) on phytoplankton communities, common off-flavors, and stocker catfish production parameters was evaluated in biofloc technology production tanks. Stocker catfish size (145.5 – 1...

  3. G-protein coupled receptor 18 (GPR18) in channel catfish: Expression analysis and efficacy as immunostimulant against Aeromonas hydrophila infection

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The objectives of this study were: 1) to determine the transcriptional profiles of G-protein coupled receptor 18 (GPR18) in channel catfish after infection with A. hydrophila compared to that in healthy catfish; 2) to determine whether over-expression of GPR18 in catfish gill cells will offer protec...

  4. Physiological responses of Chinese longsnout catfish to water temperature

    NASA Astrophysics Data System (ADS)

    Han, Dong; Xie, Shouqi; Zhu, Xiaoming; Yang, Yunxia

    2011-05-01

    We evaluated the effect of water temperature on the growth and physiology of the Chinese longsnout catfish ( Leiocassis longirostris Günther). The fish were reared at four temperatures (20, 25, 30, and 35°C) and sampled on days 7, 20, and 30. We measured plasma levels of insulin, free thyroxine (FT4), free 3,5,3'-triiodothyronine (FT3), lysozyme and leukocyte phagocytic activity. The optimum water temperature for growth was 27.7°C. The plasma levels of insulin and FT4 declined significantly ( P<0.05) on day 30 at temperatures above 20°C. Lysozyme activity was significantly ( P<0.05) lower at 25°C than at other temperatures. We conclude that final weight, insulin, FT4, and lysozyme were significantly affected by water temperature.

  5. Reproductive strategy of the Patagonian catfish Hatcheria macraei.

    PubMed

    Chiarello-Sosa, J M; Battini, M A; Barriga, J P

    2016-09-01

    This study describes the reproductive strategy of the stream-dwelling catfish Hatcheria macraei in the Pichileufu River, Argentina. Gonad maturity phases, classified on the basis of histological analysis, stages of gamete development and the frequency distribution of oocyte size, were correlated with macroscopic features of the gonads. Hatcheria macraei has a cystovarian ovary, asynchronous oocyte development and lobular testes. Five oocyte and four spermatogenic stages were identified and related to macroscopic gonad characteristics, making it possible to divide gonad development into five phases for females and males. Mature oocyte diameter ranged from 922 to 1935 µm. Absolute fecundity in mature females varied from 115 to 480 oocytes. Hatcheria macraei has multiple spawning during a protracted reproductive season that extends from December to April. This, together with its small size, is characteristic of an opportunistic reproductive strategy, commonly found in species that inhabit adverse and unpredictable environments, such as the low-order rivers of Patagonia.

  6. Spatiotemporal testing and modeling of catfish retinal neurons.

    PubMed Central

    Krausz, H I; Naka, K

    1980-01-01

    The responses of retinal neurons depend on the interaction of both temporal and spatial aspects of a light stimulus. We developed a linear spatiotemporal model of receptor and horizontal cell layers in the catfish retina based on reciprocal interactions between both layers and coupling within each. Horizontal cell transfer properties were measured experimentally using white-noise intensity modulated light spots of different diameters and were compared with analytical predictions based on the model. Good agreement was obtained with a reasonable choice of model space-constants and feedback parameters. Furthermore, the same set of parameter values determined from spot experiments enabled accurate prediction of experimental horizontal cell responses to traveling gratings. The proposed feedback connections from horizontal cells to receptors quicken the time-course of responses in both layers and sharpen receptive fields. PMID:7260243

  7. Efficacy of hydrogen peroxide for treating saprolegniasis in channel catfish

    USGS Publications Warehouse

    Howe, G.E.; Gingerich, W.H.; Dawson, V.K.; Olson, J.J.

    1999-01-01

    Hatchery-reared fish and their eggs are commonly afflicted with saprolegniasis, a fungal disease that can cause significant losses in production. Fish culturists need safe and effective fungicides to minimize losses and meet production demands. The efficacy of hydrogen peroxide was evaluated for preventing or controlling mortality associated with saprolegniasis in channel catfish Ictalurus punctatus. Saprolegniasis was systematically induced in channel catfish so various therapies could be evaluated in a controlled laboratory environment. Both prophylactic and therapeutic hydrogen peroxide bath treatments of 50, 100, and 150 ??L/L for 1 h were administered every other day for seven total treatments. All untreated positive control fish died of saprolegniasis during the prophylactic and therapeutic tests. Hydrogen peroxide treatments of 150 ??L/L were harmful (relative to lower concentrations) to test fish and resulted in 73-95% mortality. Mortality was attributed to a combination of abrasion, temperature, chemical treatment, and disease stressors. Treatments of 100 ??L/L were less harmful (relatively) but also appeared to contribute to mortality (60-79%). These treatments, however, significantly reduced the incidence of mortality and infection compared with those observed for fish of the positive control or 150-??L/L treatment groups. Overall, treatments of 50 ??L/L were found to be the most safe and effective of those tested. Mortality with this concentration ranged from 16% in therapeutic tests to 41% in prophylactic tests. The statistical model employed estimated that the optimum treatment concentration for preventing or controlling mortality, reducing the incidence of infections, and enhancing the recovery of infected fish was 75 ??L H2O2/L.

  8. Risk analysis of tractor overturns on catfish farms.

    PubMed

    Stephens, Walter B; Ibendahl, Gregory A; Myers, Melvin L; Cole, Henry P

    2010-10-01

    Fatal and nonfatal injuries occur on catfish farms as a result of tractor overturns, but these injuries can be greatly mitigated when a tractor is equipped with a rollover protective structure (ROPS) and seatbelt. This study analyzed the proportion of tractors on catfish farms in Mississippi not equipped with ROPS and the cost of retrofitting those tractors with a ROPS and seatbelt as compared to the expected benefits gained from adding the protection. To determine if farmers have the financial incentive to retrofit older tractors, a net present value framework was used because the expected benefits occur over a number of years. The ROPS retrofit is a one-time cost that occurs immediately, and thus the present value does not need to be calculated, i.e., time period 0. According to this study adding ROPS will provide a net benefit of $22,877 in the event of an overturn. When dealing with small farms (<125 acres) where an average tractor is used for approximately twice as many hours compared to an average tractor on large farms, the extra hours worked by a single tractor resulted in total benefits of retrofitting ROPS of $9.45 per year, whereas for large farms the net benefit is $4.70 (=125 acres). Given that the least expensive retrofit is $147, it would take 15.5 years of tractor use on the small farms for the expected benefits to outweigh the cost. Given the large range of costs that could occur due to an overturn, there could be a significant premium for not having ROPS protection. In other words, there likely is a smaller range of costs from an overturn with ROPS than without ROPS because ROPS reduces the more serious incidents. PMID:20954036

  9. Performance of alternative diets containing solvent-extracted distillers dried grains with solubles compared to traditional diets for pond-raised channel catfish Ictalurus punctatus and hybrid catfish I. punctatus x I. furcat

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A regional pond study was initiated in April 2011 to evaluate feeds containing solvent-extracted distillers dried grains with solubles (SE-DDGS) in both 28%- and 32% protein catfish feeds. Channel catfish, Ictalurus punctatus, were stocked in multiple-batch production ponds at the University of Ark...

  10. Methyl mercury toxicokinetics in channel catfish (Ictalurus punctatus) and largemouth bass (Micropterus salmoides) after intravascular administration

    SciTech Connect

    Schultz, I.R.; Newman, M.C.

    1997-05-01

    The authors compared the differences in the distribution and elimination of Ch{sub 3}Hg after intraarterial injection and serial blood removal in catfish and bass of similar body size under consistent water quality conditions. The blood and plasma concentration-time profiles of individual fish were analyzed using a three-compartment, clearance-volume model. The plasma protein binding of CH{sub 3}Hg was determined by ultrafiltration and the binding affinity ({rho}) of CH{sub 3}Hg for red blood cells (RBCs) was also calculated. Toxicokinetic analysis of the plasma concentration-time profiles provided the following values: apparent volume of distribution at steady state (V{sub ss}) = 30 {+-} 14 ml/g (catfish), 6.2 {+-} 2 ml/g (bass); total body clearance (Cl{sub b}) = 0.026 {+-} 0.011 ml/h/g (catfish), 0.0057 {+-} 0.001 ml/h/g (bass). The values of V{sub ss} and Cl{sub b} estimated from the blood concentration-time profiles in catfish and bass were fivefold lower. The elimination half-life from blood and plasma was between 814 and 1670 h and was not statistically different between species or reference fluid. The AUC{sub 0{yields}x} for blood was over three times higher than plasma, due to the binding of CH{sub 3}Hg to RBCs. The unbound fraction of CH{sub 3}Hg in bass plasma was 14-fold lower and the {rho} for RBCs was 20 times greater than catfish. The decreased binding to plasma and RBCs in catfish is consistent with the increased extravascular distribution and clearance capacity of CH{sub 3}Hg in catfish because a larger fraction of the CH{sub 3}Hg in blood is available to distribute outside the vascular system.

  11. Copper use and accumulation in catfish culture in the Mekong Delta, Vietnam.

    PubMed

    Marcussen, Helle; Løjmand, Helle; Dalsgaard, Anders; Hai, Dao M; Holm, Peter E

    2014-01-01

    Aquaculture of Pangasius hypophthalmus (striped catfish) in Vietnam reached 1.1 million tonnes in 2011 and catfish fillets are exported worldwide. The intensive cultures of catfish mainly in earth ponds have made it necessary to apply CuSO4 and other chemicals to control external parasites and other pathogens. However, accumulation of Cu in aquaculture ponds may pose a hazard to growth of fish or to the aquatic environment. The aim of this study was to determine accumulation of Cu in sediment, water and fish in a catfish pond with a history of repeated treatment with CuSO4 in the Mekong Delta, Vietnam. Copper concentrations in pond sediment were in the interval 21.3-45.7 mg kg(-1) dw and did not exceed the Vietnamese values for soil to be used for agricultural production (70 mg kg(-1) dw.). During three samplings the total mean concentration of Cu in pond water (4 μg L(-1)) did not exceed the LC50-value (70 μg L(-1)) for catfish and the mean dissolved concentration of Cu (0.986 μg L(-1)) did not seem to constitute a risk for the stability of the aquatic ecosystem. No significant variation in Cu concentrations between sampling sites in the pond and depth of sediment profile were determined. The accumulation of Cu in catfish was highest in the liver compared to the skin, gills and muscle tissue. With the current practice of removing pond sludge three to four times during a production cycle little if any Cu seems to accumulate in catfish ponds despite repeated anti-parasite treatments with CuSO4. Further studies are needed to assess the eco-toxicity and impact on agricultural production when pond sediment is discharged into aquatic recipients and used as soil fertilizer.

  12. New primate genus from the Miocene of Argentina.

    PubMed

    Tejedor, Marcelo F; Tauber, Adán A; Rosenberger, Alfred L; Swisher, Carl C; Palacios, María E

    2006-04-01

    Killikaike blakei is a new genus and species of anthropoid from the late Early Miocene of southeastern Argentina based on the most pristine fossil platyrrhine skull and dentition known so far. It is part of the New World platyrrhine clade (Family Cebidae; Subfamily Cebinae) including modern squirrel (Saimiri) and capuchin monkeys (Cebus) and their fossil relatives known from Early to Middle Miocene and subrecent periods. Living cebines are relatively large-brained, adroit predatory foragers and live within complex social groups, and wild capuchins exhibit a wide range of behaviors associated with enhanced intelligence. We show that K. blakei lacks diagnostic derived characteristics of the lower face and premolar dentition that are shared by modern cebines, but its strongly vaulted frontal bone and capacious anterior cranial fossa indicate the early evolution of an enlarged forebrain.

  13. Upper Miocene reef complex of Mallorca, Balearic Islands, Spain

    SciTech Connect

    Pomar, L.

    1988-02-01

    The late Tortonian-Messinian coral reef platform of south Mallorca onlaps a folded middle late Miocene carbonate platform on which progradation of up to 20 km occurs. Vertical sea cliffs (up to 100 m high) superbly show the last 5 km of this progradation and complement the numerous water-well cores from the island interior. The Mallorca reef presents the most complete facies zonation of the Miocene reefs of the western Mediterranean. The reef wall framework is up to 20 m thick and shows (1) erosional reef flat with reef breccia and small corals; (2) spur-and-grove zone with large, massive corals; (3) deep buttresses and pinnacles with terraces of branching corals; and (4) deep reef wall with flat, laminar coral colonies, branching red algae, and Halimeda sands.

  14. Late Miocene biogeography and paleoclimatology of the central North Atlantic

    USGS Publications Warehouse

    Poore, R.Z.

    1981-01-01

    Quantitative analyses of planktonic foraminiferal assemblages from Deep Sea Drilling Project (DSDP) Holes 334 and 410 demonstrate that subpolar and subtropical faunal provinces existed in the North Atlantic during the late Miocene. Climatic oscillations are clearly recorded in Hole 410 by variations in abundance of the Neogloboquadrina subpolar assemblage. These climatic oscillations have a period of about 1 m.y. Higher frequency oscillations with a periodicity of one to several hundred thousand years are evident from about 6.5 to 7.5 m.y. and are probably present throughout the entire late Miocene. A revised age of 7.0 m.y. is proposed for the first occurrence of the calcareous nannofossil Amaurolithus primus (the Amaurolithus datum). ?? 1981.

  15. Across the Pacific: Climate Evolution in the Middle Miocene

    NASA Astrophysics Data System (ADS)

    Fox, L. R.; Wade, B.; Holbourn, A. E.; Leng, M. J.

    2013-12-01

    We present the first high-resolution (3 kyr) astronomically-tuned record of δ18O and δ13C from planktonic foraminifera for the equatorial Pacific Ocean (16.5-13.5 Myr). Our data provides exciting new information on sea surface temperatures and primary productivity changes at the tropics during the middle Miocene at a resolution not achieved in any previous study, which sheds new light on the middle Miocene climatic transition (MMCT) and associated carbon-isotope excursion. Reliable sea surface temperature estimates are crucial to any reconstruction and modelling of past ocean salinity and density, water column stratification, thermohaline circulation, and ice volume. Despite extensive studies of benthic foraminifera, existing planktonic foraminiferal records of this interval are extremely scarce and of low resolution, with samples representing time intervals of 2x105 and 5x105 years. Previous studies have been hindered by the absence of biogenic carbonate (e.g., Leg 199). Consequently the impact of global warming and cooling on tropical surface waters and the propagation of orbital cycles in the Earth System are unknown. In 2009 Integrated Ocean Drilling Program Expedition 320/321 recovered lower-middle Miocene sediments with high sedimentation rates (30m/myr), continuous recovery, and orbital cyclicity from the east equatorial Pacific Ocean. At Site U1338 planktonic foraminifera are abundant and diverse in the lower and middle Miocene sediments and exceptionally well preserved. Scanning electron microscope studies revealed open pore spaces, little evidence of calcitic overgrowth on the wall surface and in many cases preserved spines (Fox and Wade, in press). We compare our data from Site U1338 to Site 1146 in the western equatorial Pacific Ocean, to reconstruct bottom and surface water conditions and changes in ocean dynamics across the equatorial Pacific during this highly complex interval of climate history.

  16. Across the Pacific: Climate Evolution in the Middle Miocene

    NASA Astrophysics Data System (ADS)

    Fox, Lyndsey; Wade, Bridget; Holbourn, Ann; Leng, Melanie

    2014-05-01

    We present the first high-resolution (3 kyr) astronomically-tuned record of δ18O and δ13C from planktonic foraminifera for the equatorial Pacific Ocean (16.5-13.5 Myr). Our data provides exciting new information on sea surface temperatures and primary productivity changes at the tropics during the middle Miocene at a resolution not achieved in any previous study, which sheds new light on the middle Miocene climatic transition (MMCT) and associated carbon-isotope excursion. Reliable sea surface temperature estimates are crucial to any reconstruction and modelling of past ocean salinity and density, water column stratification, thermohaline circulation, and ice volume. Despite extensive studies of benthic foraminifera, existing planktonic foraminiferal records of this interval are extremely scarce and of low resolution, with samples representing time intervals of 2x105and 5x105 years. Previous studies have been hindered by the absence of biogenic carbonate (e.g., Leg 199). Consequently the impact of global warming and cooling on tropical surface waters and the propagation of orbital cycles in the Earth System are unknown. In 2009 Integrated Ocean Drilling Program Expedition 320/321 recovered lower-middle Miocene sediments with high sedimentation rates (30m/myr), continuous recovery, and orbital cyclicity from the east equatorial Pacific Ocean. At Site U1338 planktonic foraminifera are abundant and diverse in the lower and middle Miocene sediments and exceptionally well preserved. Scanning electron microscope studies revealed open pore spaces, little evidence of calcitic overgrowth on the wall surface and in many cases preserved spines (Fox and Wade, 2013). We compare our data from Site U1338 to Site 1146 in the western equatorial Pacific Ocean, to reconstruct bottom and surface water conditions and changes in ocean dynamics across the equatorial Pacific during this highly complex interval of climate history.

  17. Miocene Oaks from Eastern Zhejiang, China and their Paleoenvironmental Significance

    NASA Astrophysics Data System (ADS)

    Jia, Hui; Ferguson, David

    2015-04-01

    The intertrappean fluvial-lacustrine beds belonging to the Upper Miocene Shengxian Formation in eastern China contain many exquisitely preserved plant fossils, e.g., leaves, fruits and seeds as well as plentiful pollen. The Fagaceae is the dominant taxon represented by 5 genera and 15 species, four of which belong to Quercus subgenus Cyclobalanopsis. Quercus species (oaks) are highly sensitive to environmental changes. The correlation between climate and trichome base density of Quercus glauca and Quercus delavayi of subg. Cyclobalanopsis, which are the NLRs of two fossil species, Quercus paraglauca and Quercus aff. delavayi, indicates that the trichome base density of Quercus glauca is comprehensively affected by various climate factors, but most influenced by solar radiation and latitude. The trichome base parametrics of Quercus paraglauca and the comparison of epidermal cell characteristics between Quercus paraglauca and Quercus aff. delavayi and their NLR species of subg. Cyclobalanopsis, show that the climate was warmer and more humid in the late Miocene than that of today in eastern Zhejiang, China. A study of the stomatal index of Quercus glauca and Quercus delavayi, collected in different years, demonstrates that they are very sensitive to the variation of atmospheric CO2 concentration. By comparing the stomatal ratio between the two fossil species and their NLRs, the paleoatmospheric CO2 concentration in the late Miocene is reconstructed as ca. 400 ppmv, i.e. higher than the present natural CO2 concentration eliminating the industrial influence.

  18. New Miocene Fossils and the History of Penguins in Australia

    PubMed Central

    Park, Travis; Fitzgerald, Erich M. G.; Gallagher, Stephen J.; Tomkins, Ellyn; Allan, Tony

    2016-01-01

    Australia has a fossil record of penguins reaching back to the Eocene, yet today is inhabited by just one breeding species, the little penguin Eudyptula minor. The description of recently collected penguin fossils from the re-dated upper Miocene Port Campbell Limestone of Portland (Victoria), in addition to reanalysis of previously described material, has allowed the Cenozoic history of penguins in Australia to be placed into a global context for the first time. Australian pre-Quaternary fossil penguins represent stem taxa phylogenetically disparate from each other and E. minor, implying multiple dispersals and extinctions. Late Eocene penguins from Australia are closest to contemporaneous taxa in Antarctica, New Zealand and South America. Given current material, the Miocene Australian fossil penguin fauna is apparently unique in harbouring ‘giant penguins’ after they went extinct elsewhere; and including stem taxa until at least 6 Ma, by which time crown penguins dominated elsewhere in the southern hemisphere. Separation of Australia from Antarctica during the Palaeogene, and its subsequent drift north, appears to have been a major event in Australian penguin biogeography. Increasing isolation through the Cenozoic may have limited penguin dispersal to Australia from outside the Australasian region, until intensification of the eastwards-flowing Antarctic Circumpolar Current in the mid-Miocene established a potential new dispersal vector to Australia. PMID:27115739

  19. Pre-transform early Miocene extension in western California

    SciTech Connect

    Tennyson, M.E. )

    1989-09-01

    Earliest Miocene (20-24 Ma) faulting and volcanism were widespread in western California, including the San Joaquin-La Honda basin, Coast Ranges, and Transverse Ranges. Evidence for strike slip on faults of this age is lacing. Their arrangement on a pre-San Andreas restoration suggest continuity with early Miocene extended terranes in eastern California and southwestern Arizona. Deformation was probably not an effect of transform or triple-junction-migration tectonics, because it was synchronous over 300 km of latitude and there is no direct evidence for a transform boundary until late in early Miocene time. Magnetic anomalies in the eastern Pacific permit an interpretation that a spreading ridge supplied a still-active subduction zone with young oceanic crust until sometime after 20 Ma. If so, extension evidently took place in an arc-related setting. A transform regime probably formed about 18 Ma, when most basins underwent episodes of deepening or uplift, strike-slip faults became active, and rotation of the western Transverse Ranges block began.

  20. Miocene reef platforms from northwestern Tuamotu Islands, central Pacific

    SciTech Connect

    Montaggioni, L.F.; Mnhn-Ephe, A.

    1988-02-01

    Reef deposits of Miocene age occur on several northwestern Tuamotu atolls as either pointed residual and scattered reliefs through the Holocene reef sequence (Mataiva, Rangiroa, Tikehau, Kaukura) or elevated atoll-shaped platforms (Makatea). Throughout the region considered, the depositional/diagenetic history of Miocene reefs can be reconstructed as follows. During early Miocene times (e-f range-biozones), reef platforms developed on top of older carbonate banks, capping a midplate volcanic ridge of early Tertiary age. More than 100 m thick, these platforms displayed concentrically zoned environments of deposition: a peripheral subemergent rim composed of coralgalforaminiferal boundstones, and a very shallow central area in which foraminiferal and molluscan fine sands and muds were subhorizontally deposited. Local evidence of internal unconformity surfaces and subaerially produced features indicates that periods of relative emergency occurred as the reef piles grew upward. The ultimate stage of platform development is believed to have been a complete upfilling of the back-reef areas and subsequent emergence. Correlatively, a freshwater lens would have been formed close to the surface level of each of the so-formed islands. Dolomitization may have been initiated in the marine water/freshwater phreatic mixing zone. During lowstands, severe meteoric alteration affected emergent carbonate deposits, forming incipient cavity systems; the usual atoll morphology is considered to have been initiated at this time (presumably middle Micoene).

  1. Ventilation of the Miocene Arctic Ocean: An idealized model study

    NASA Astrophysics Data System (ADS)

    Thompson, Bijoy; Nilsson, Johan; Nycander, Jonas; Jakobsson, Martin; Döös, Kristofer

    2010-11-01

    A model study of an idealized early Miocene Arctic Ocean has been undertaken. The work is motivated by the first drill core retrieved from the Lomonosov Ridge in the central Arctic Ocean, which suggests a transition from anoxic to oxic condition during the early Miocene, a feature presumably related to the opening of the Fram Strait. Here, the ventilation in a semienclosed basin, connected with the ocean through a strait with a sill, is examined using an ocean circulation model that includes a passive age tracer. In particular, we investigate how the ventilation depends on strait geometry, freshwater influx, and surface wind stress. We find that the turnover time, characterizing the bulk ventilation rate, is primarily controlled by the strait width and the wind stress. Generally, the oldest water in the basin is encountered near the sill depth, but wind forcing displaces the oldest water downward. For narrow straits, the turnover time gives an upper bound on the mean age of the basin water. The results have implications when translating local oxygen conditions, recorded in the sediment sequence from the Lomonosov Ridge, to basin-scale circulation patterns. Further, the results indicate that the early Miocene Arctic Ocean became well ventilated when the Fram Strait reached a width of about 100 km.

  2. Updated chronology for the Miocene hominoid radiation in Western Eurasia

    PubMed Central

    Casanovas-Vilar, Isaac; Alba, David M.; Garcés, Miguel; Robles, Josep M.; Moyà-Solà, Salvador

    2011-01-01

    Extant apes (Primates: Hominoidea) are the relics of a group that was much more diverse in the past. They originated in Africa around the Oligocene/Miocene boundary, but by the beginning of the Middle Miocene they expanded their range into Eurasia, where they experienced a far-reaching evolutionary radiation. A Eurasian origin of the great ape and human clade (Hominidae) has been favored by several authors, but the assessment of this hypothesis has been hampered by the lack of accurate datings for many Western Eurasian hominoids. Here we provide an updated chronology that incorporates recently discovered Iberian taxa and further reevaluates the age of many previously known sites on the basis of local biostratigraphic scales and magnetostratigraphic data. Our results show that identifiable Eurasian kenyapithecins (Griphopithecus and Kenyapithecus) are much younger than previously thought (ca. 14 Ma instead of 16 Ma), which casts serious doubts on the attribution of the hominoid tooth from Engelswies (16.3–16.5 Ma) to cf. Griphopithecus. This evidence is further consistent with an alternative scenario, according to which the Eurasian pongines and African hominines might have independently evolved in their respective continents from similar kenyapithecin ancestors, resulting from an early Middle Miocene intercontinental range extension followed by vicariance. This hypothesis, which would imply an independent origin of orthogrady in pongines and hominines, deserves further testing by accurately inferring the phylogenetic position of European dryopithecins, which might be stem pongines rather than stem hominines. PMID:21436034

  3. Estimates of CO2 since the mid-Miocene

    NASA Astrophysics Data System (ADS)

    Stoll, Heather

    2016-04-01

    For past warm climates, direct CO2 determinations are unavailable. Our inferences of Antarctic ice sheet thresholds and climate sensitivity to CO2 are therefore strongly conditioned by the reliability of CO2 proxy reconstructions. For the Miocene, these rely heavily on proxies using the carbon isotopic fractionation of marine phytoplankton during photosynthesis (ep). While recent records are beginning to reveal more clearly the long term CO2 trends since the middle Miocene , the absolute CO2 concentrations are subject to higher uncertainty. This in turn influences the ability of models to simulate dynamic Antarctic ice sheet behavior in the context of expected ice sheet hysteresis. In this contribution, I discuss a new approach for estimating CO2 from published and new measurements of phytoplankton carbon isotopic fractionation using the ACTI-CO cell model. This approach accounts for the physiological adaptations made by phytoplankton cells to avoid falling below optimal photosynthetic rates as CO2 declines, the carbon concentrating mechanism. The model yields CO2 estimates which can be significantly (up to 2-fold) higher than those estimated from classic equations. Given the large degree of cooling since the late Miocene in extratropical sea surface temperature records, such CO2 estimates are consistent with a more conservative estimate of climate sensitivity over the last 12 Ma.

  4. Connectivity controls on the late Miocene eastern Mediterranean fish fauna

    NASA Astrophysics Data System (ADS)

    Agiadi, Konstantina; Antonarakou, Assimina; Kontakiotis, George; Kafousia, Nefeli; Moissette, Pierre; Cornée, Jean-Jacques; Manoutsoglou, Emmanouil; Karakitsios, Vasileios

    2016-06-01

    Environmental change significantly affects the production of fish resources and their dependent societies. The paleontological record offers unique insight into the effects of long-term paleoenvironmental variability on the fish species' distributions and abundances. In the present study, we investigate the late Miocene (7.5-6.5 Ma) fish assemblages of the Potamida section in western Crete (eastern Mediterranean). The determined fish taxa are examined in a paleobiogeographic context, with regard to their geographic and stratigraphic distribution from the early Miocene (~13 Ma) through today. In addition, present-day ecological data are used to reconstruct the paleoenvironmental conditions in the study area. Planktonic foraminifer biostratigraphy significantly improves the earlier dating of the studied sequence. The late Miocene fish fauna of Potamida includes 35 taxa (seven in open nomenclature) from 13 teleost families. The eastern Mediterranean biostratigraphic and geographic distribution of 32 taxa is significantly expanded into the Tortonian, whereas 13 species are recorded for the first time from the Messinian. Four stages are distinguished in the area's paleoenvironmental evolution. (1) The Potamida area was an open marine environment with depths exceeding 150 m between ~7.5-7.45 Ma. (2) Between 7.45-7.36 Ma, the results suggest depths between 300-400 m. (3) The depositional depth increases between 7.36-7.28 Ma to 400-550 m. (4) Later on, approximately between 6.8-6.6 Ma, the depth is again estimated around 100-150 m.

  5. New Miocene Fossils and the History of Penguins in Australia.

    PubMed

    Park, Travis; Fitzgerald, Erich M G; Gallagher, Stephen J; Tomkins, Ellyn; Allan, Tony

    2016-01-01

    Australia has a fossil record of penguins reaching back to the Eocene, yet today is inhabited by just one breeding species, the little penguin Eudyptula minor. The description of recently collected penguin fossils from the re-dated upper Miocene Port Campbell Limestone of Portland (Victoria), in addition to reanalysis of previously described material, has allowed the Cenozoic history of penguins in Australia to be placed into a global context for the first time. Australian pre-Quaternary fossil penguins represent stem taxa phylogenetically disparate from each other and E. minor, implying multiple dispersals and extinctions. Late Eocene penguins from Australia are closest to contemporaneous taxa in Antarctica, New Zealand and South America. Given current material, the Miocene Australian fossil penguin fauna is apparently unique in harbouring 'giant penguins' after they went extinct elsewhere; and including stem taxa until at least 6 Ma, by which time crown penguins dominated elsewhere in the southern hemisphere. Separation of Australia from Antarctica during the Palaeogene, and its subsequent drift north, appears to have been a major event in Australian penguin biogeography. Increasing isolation through the Cenozoic may have limited penguin dispersal to Australia from outside the Australasian region, until intensification of the eastwards-flowing Antarctic Circumpolar Current in the mid-Miocene established a potential new dispersal vector to Australia.

  6. New Miocene Fossils and the History of Penguins in Australia.

    PubMed

    Park, Travis; Fitzgerald, Erich M G; Gallagher, Stephen J; Tomkins, Ellyn; Allan, Tony

    2016-01-01

    Australia has a fossil record of penguins reaching back to the Eocene, yet today is inhabited by just one breeding species, the little penguin Eudyptula minor. The description of recently collected penguin fossils from the re-dated upper Miocene Port Campbell Limestone of Portland (Victoria), in addition to reanalysis of previously described material, has allowed the Cenozoic history of penguins in Australia to be placed into a global context for the first time. Australian pre-Quaternary fossil penguins represent stem taxa phylogenetically disparate from each other and E. minor, implying multiple dispersals and extinctions. Late Eocene penguins from Australia are closest to contemporaneous taxa in Antarctica, New Zealand and South America. Given current material, the Miocene Australian fossil penguin fauna is apparently unique in harbouring 'giant penguins' after they went extinct elsewhere; and including stem taxa until at least 6 Ma, by which time crown penguins dominated elsewhere in the southern hemisphere. Separation of Australia from Antarctica during the Palaeogene, and its subsequent drift north, appears to have been a major event in Australian penguin biogeography. Increasing isolation through the Cenozoic may have limited penguin dispersal to Australia from outside the Australasian region, until intensification of the eastwards-flowing Antarctic Circumpolar Current in the mid-Miocene established a potential new dispersal vector to Australia. PMID:27115739

  7. Increasing Fish Oil Levels in Commercial Diets Influence Hematology and Immune Responses of Channel Catfish, Ictalurus punctatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cultured freshwater fish including channel catfish are commonly fed grain-soybean meal based feeds high in linoleic series (n-6) fatty acids. Published studies have shown that supplementation of catfish diets with marine fish oil rich in n-3 highly unsaturated fatty acids (n-3 HUFA) significantly in...

  8. Complete structure, genomic organization, and expression of channel catfish (Ictalurus punctatus, Rafinesque 1818) matrix metalloproteinase-9 gene

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In the course of studying pathogenesis of enteric septicemia of catfish, we noted that the channel catfish (CC) matrix metalloproteinase-9 (MMP-9) expressed sequence tag (EST) was up-regulated after early Edwardsiella ictaluri infection. In this study, the CC MMP-9 gene was cloned, sequenced and ch...

  9. Roles for mannose binding lectin and rhamnose binding lectin in channel catfish fed essential oils and challenged with Edwardsiella ictaluri

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A major problem in the catfish farming industry has been high disease loss to enteric septicemia of catfish (ESC), caused by the bacterium Edwardsiella ictaluri. Methods to control this disease include vaccination, antibiotic therapy, and restricted feeding. Another method that has been examined i...

  10. DNAk is a dominant epitope in the humoral immune response of channel catfish (Ictalurus punctatus) to Flavobacterium columnare

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Vaccination remains a viable alternative for bacterial disease protection in fish; however additional work is required to understand the mechanisms of adaptive immunity in the channel catfish. To assess the humoral immune response to Flavobacterium columnare; a group of channel catfish were first im...

  11. Dioxin congener patterns in commercial catfish from the United States and the indication of mineral clays as the potential source

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Since 1991 the U.S. Department of Agriculture (USDA) has conducted annual surveys of pesticide residues in foods under the Agricultural Marketing Service’s Pesticide Data Program (PDP). To assess chemical residues in domestically marketed catfish products, 1479 catfish samples were collected during ...

  12. Evaluation of potassium permanganate against an experimental subacute infection of Flavobacterium columnare in channel catfish, Icatlurus punctatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The efficacy of potassium permanganate (KMnO4) as a prophylactic and therapeutic treatment for subacute infection of Flavobacterium columnare was demonstrated in experimentally infected channel catfish, Ictalurus punctatus. Catfish experimentally infected with F. columnare to mimic a subacute infec...

  13. Apolipoprotein A1 in channel catfish: Transcriptional analysis, antimicrobial activity, and efficacy as plasmid DNA immunostimulant against Aeromonas hydrophila infection

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The objectives of this study were to: 1) determine transcriptional profiles of apolipoprotein A1 (ApoA1) in collected channel catfish tissues after infection with A. hydrophila by bath immersion; 2) investigate whether recombinant channel catfish apolipoprotein A1 produced in E. coli expression syst...

  14. Channel catfish hatchery production efficiency using a vertical-lift incubator the see-saw at various egg loading densities

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel catfish spawns are typically incubated in ¼-in mesh baskets suspended in water that is agitated with paddles positioned between baskets. We tested a new vertical-lift incubator (the “See-Saw”) to incubate channel catfish spawns. Previous research demonstrated that when loaded with spawns at...

  15. The “See-Saw”: A Vertical-Lift Incubator Designed for Channel Catfish Ictalurus punctatus Egg Masses

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel catfish (Ictalurus punctatus) egg masses are typically incubated in baskets that are suspended within metal troughs with water that is agitated and pushed around the eggs with paddles. A limiting factor in the successful incubation of channel catfish eggs is the absorption of oxygen to the ...

  16. The effects of a sublethal dose of botulinum serotype E on the swimming performance of channel catfish fingerlings

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Visceral toxicosis of catfish (VTC) is a disease of cultured Channel Catfish Ictalurus punctatus in the Mississippi Delta region and surrounding states. The etiology of VTC is associated with botulinum serotype E (BoNT/E), which causes blockage of acetylcholine release at the neuromuscular junction,...

  17. An Asian Origin of Virulent Aeromonas hydrophila Responsible for Disease Epidemics in United States-Farmed Catfish

    PubMed Central

    Hossain, Mohammad J.; Sun, Dawei; McGarey, Donald J.; Wrenn, Shannon; Alexander, Laura M.; Martino, Maria Elena; Xing, Ye; Terhune, Jeffery S.

    2014-01-01

    ABSTRACT Since 2009, catfish farming in the southeastern United States has been severely impacted by a highly virulent and clonal population of Aeromonas hydrophila causing motile Aeromonas septicemia (MAS) in catfish. The possible origin of this newly emerged highly virulent A. hydrophila strain is unknown. In this study, we show using whole-genome sequencing and comparative genomics that A. hydrophila isolates from diseased grass carp in China and catfish in the United States have highly similar genomes. Our phylogenomic analyses suggest that U.S. catfish isolates emerged from A. hydrophila populations of Asian origin. Furthermore, we identified an A. hydrophila strain isolated in 2004 from a diseased catfish in Mississippi, prior to the onset of the major epidemic outbreaks in Alabama starting in 2009, with genomic characteristics that are intermediate between those of the Asian and Alabama fish isolates. Investigation of A. hydrophila strain virulence demonstrated that the isolate from the U.S. catfish epidemic is significantly more virulent to both channel catfish and grass carp than is the Chinese carp isolate. This study implicates the importation of fish or fishery products into the United States as the source of highly virulent A. hydrophila that has caused severe epidemic outbreaks in United States-farmed catfish and further demonstrates the potential for invasive animal species to disseminate bacterial pathogens worldwide. PMID:24895303

  18. Efficacy of metomidate and tricaine methanesulfonate to modulate the short-term cortisol stress response in channel catfish Ictalurus punctatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The ability of the anesthetics metomidate and tricaine methanesulfonate to mitigate the cortisol stress response of channel catfish Ictalurus punctatus was evaluated during a 10 min confinement stress. Channel catfish (11.9 ± 0.5 g; mean ± SE) were transferred from holding tanks to confinement buck...

  19. A non-lethal means to identify spermiating D&B strain of blue catfish, Ictalurus furcatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    US farm-raised catfish production was 334 million pounds in 2013, the first annual increase documented in a decade. This positive development is due to the increased adoption of channel x blue hybrid catfish in the industry. Research and development efforts to improve the genetics of channel catfi...

  20. A leukocyte immune-type receptor (LITR) subset is a marker of antiviral cytotoxic cells in channel catfish, Ictalurus punctatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel catfish, Ictalurus punctatus, leukocyte immune type-receptors (LITRs) represent a multigene family that encodes immunoglobulin superfamily proteins that mediate activating or inhibitory signaling. Here we demonstrate the utility of mAb CC41 to monitor viral cytotoxic responses in catfish an...

  1. Recombinant goose-type lysozyme in channel catfish: Lysozyme activity and efficacy as plasmid DNA immunostimulant against Aeromonas hydrophila infection

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The objectives of this study were: 1) to investigate whether recombinant channel catfish lysozyme g (CC-Lys-g) produced in E. coli expression system possesses any lysozyme activity; and 2) to evaluate whether channel catfish lysozyme g plasmid DNA could be used as an immunostimulant to protect chann...

  2. Recombinant goose-type lysozyme in channel catfish: lysozyme activity and efficacy as plasmid DNA immunostimulant against Aeromonas hydrophila infection

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The objectives of this study were: 1) to investigate whether recombinant channel catfish lysozyme g (CC-Lys-g) produced in E. coli expression system possesses any lysozyme activity; and 2) to evaluate whether channel catfish lysozyme g plasmid DNA could be used as an immunostimulant to protect chann...

  3. Evaluation of corn distillers dried grains with solubles and brewers yeast in diets for channel catfish Ictalurus punctatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A study was conducted to examine the use of distillers grains with solubles (DDGS), ethanol extracted DDGS (EDDGS), and brewers yeast in channel catfish, Ictalurus punctatus, diets. Diets containing these ingredients were compared with all-plant and fish meal control diets. Juvenile channel catfish ...

  4. Hormone-injected gravid channel catfish held in individual mesh bag reduces handling stress and improves reproductive performance in hatcheries

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This study compared holding hormone-injected female channel catfish in soft-mesh bags to communally held hormone-injected female catfish in a tank as a stress reduction strategy to improve reproductive performance. Fish held in tanks were crowded, handled multiple times to record weight prior to ho...

  5. Summary of channel catfish and rainbow trout production at the Gallatin Waste Heat Aquaculture Facility, 1979-1980

    SciTech Connect

    Collins, C.M.; Schweinforth, R.L.; Burton, G.L.

    1984-02-01

    These studies have indicated that channel catfish and rainbow trout can be intensively cultured in concrete raceways using waste heat effluent water from the Gallatin Steam Plant. Optimum production was attained, especially with channel catfish, when desirable water temperatures and proper environmental conditions occurred. High density culture is possible during the winter and early spring months.

  6. Influence of fertilizing water pH on the hatching success of stripped channel catfish eggs on channel x blue hybrid catfish embryo production in hatcheries

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Variable egg quality is one of the most important constrains to the development of aquaculture. The quality of eggs that are manually stripped from channel catfish are affected by variation in parental genetics, maturity, type and dose of hormone, age and pre-spawning stress of female fish. Furthe...

  7. Oligocene to Miocene carbon isotope cycles and abyssal circulation changes

    NASA Astrophysics Data System (ADS)

    Miller, Kenneth G.; Fairbanks, Richard G.

    Three cycles of δ13C occurred in Oligocene to Miocene benthic and planktonic foraminifera at western North Atlantic Sites 558 and 563. Intervals of high δ13C occurred at about 35-33 Ma (early Oligocene), 25-22 Ma (across the Oligocene/Miocene boundary), and 18-14 Ma (across the early/middle Miocene boundary). Similar carbon isotopic fluctuations have been measured in benthic and planktonic foraminifera from the Atlantic, Pacific, and Indian oceans, suggesting that these cycles represent global changes in the δ13C of mean ocean water. The average duration of the carbon cycles is 50 times greater than the residence time of carbon in the oceans. Therefore, the mechanism controlling these cycles must be tied to changes in the input ratio of organic carbon to carbonate from weathering rocks or to changes in the output ratio of organic carbon to carbonate in marine sediments. Following a strategy used to study modern and Pleistocene oceans, benthic foraminiferal δ13C differences between the Atlantic and Pacific are used to infer Oligocene through Miocene abyssal circulation changes. The Atlantic was most enriched in l3C relative to the Pacific from about 36-33 Ma (early Oligocene) and 26-10 Ma (late Oligocene to late Miocene). We interpret this as indicating supply of nutrient-depleted bottom water in the North Atlantic, perhaps analogous to modern North Atlantic Deep Water. High benthic foraminiferal δ13O values at about 36-35 Ma, 31-28 Ma, 25-24 Ma, and younger than 15 Ma indicate the presence of ice sheets at these times. Covariance between benthic and planktonic foraminiferal δ18O records of 0.3-0.5°/ºº at 36 Ma, 31 Ma, and 25 Ma suggests that three periods of continental glaciation caused eustatic (global sea-level) lowerings of 30-50 m during the Oligocene epoch. The δ13C cycles do not correlate with sea-level changes deduced from oxygen isotopic data, nor do they correlate with other proxy indicators for sea level.

  8. The efficacy of mass-marking channel catfish fingerlings by immersion in oxytetracycline

    USGS Publications Warehouse

    Stewart, David R.

    2011-01-01

    Oxytetracycline (OTC) has been extensively used for marking a variety of fish species, but has never been successfully used to mark channel catfish Ictalurus punctatus. Channel catfish fingerlings (~ 25 mm TL) obtained from the Oklahoma Department of Wildlife Conservation at Byron Fish Hatchery were kept in Living Streams (791 to 1,018 L) equipped with recirculation units. Marking trials consisted of immersing channel catfish in one of three concentrations (250, 450, and 700 mg/L) OTC hydrochloride [HCl] for 6 hours. Samples of channel catfish were obtained from each group at 1-week and 4-week postimmersion. Lapilli otoliths and pectoral spines were removed to assess mark presence with an epi-fluorescent compound microscope. After one week, no marks were detected on pectoral spines for all treatments, mark detection on otoliths depended on concentration, but never exceeded 43% (700 mg/L). After four weeks, all otoliths and pectoral spines were determined marked for 700 mg/L OTC, 20% for fish immersed in 450 mg/L OTC, and 0% were marked after four weeks at the 250 mg/L OTC. Results show, channel catfish fingerlings can be successfully marked with immersion in OTC at 700 mg/L for at least 6 hours.

  9. Microarray chip development using infrared imaging for the identification of catfish species.

    PubMed

    Handy, Sara M; Chizhikov, Vladimir; Yakes, Betsy Jean; Paul, Stephen Z; Deeds, Jonathan R; Mossoba, Magdi M

    2014-01-01

    Several families of catfish species are extensively aquacultured around the world; however, only those from the family Ictaluridae can be labeled as catfish in the United States. Non-Ictalurid catfish species that are marketed as "catfish" in the USA are considered misbranded. Misbranding in general has led to an increased interest in developing deoxyribonucleic acid (DNA)-based methods such as DNA barcoding, polymerase chain reaction restriction fragment length polymorphism, and DNA microarrays with fluorescence detection for the identification of fish species. In this proof-of-concept study, DNA microarrays coupled with a newly developed mid-infrared imaging detection method were applied to the identification of seven species of catfish for the first time. Species-specific DNA probes targeting three regions per species of the cytochrome c oxidase 1 (barcoding) gene were developed and printed as microarrays on glass slides. Deoxyribonucleic acid targets labeled with biotin were hybridized to their complementary probes using a strategy that allowed the selective formation of a silver layer on hybridized spots needed for detection. Using this three-probe format, the seven species were all identified correctly, even when a limited number of false positive spots were observed. Raman spectroscopy was employed to further characterize the arrays.

  10. Identification of SHIP-1 and SHIP-2 homologs in channel catfish, Ictalurus punctatus.

    PubMed

    Taylor, Erin B; Nayak, Deepak K; Quiniou, Sylvie M A; Bengten, Eva; Wilson, Melanie

    2015-07-01

    Src homology domain 2 (SH2) domain-containing inositol 5'-phosphatases (SHIP) proteins have diverse roles in signal transduction. SHIP-1 and SHIP-2 homologs were identified in channel catfish, Ictalurus punctatus, based on sequence homology to murine and human SHIP sequences. Full-length cDNAs for catfish SHIP-1 and SHIP-2 (IpSHIP-1 and IpSHIP-2) were obtained using 5' and 3' RACE protocols. Catfish SHIP molecules share a high degree of sequence identity to their respective SHIP sequences from diverse taxa and both are encoded by single copy genes. IpSHIP-1 and IpSHIP-2 transcripts were expressed in all catfish tissues analyzed except for skin, and IpSHIP-1 message was more abundant than IpSHIP-2 message in lymphoid tissues. Catfish clonal B, cytotoxic T, and macrophage cell lines also expressed message for both molecules. IpSHIP-1 and IpSHIP-2 SH2 domains were expressed as recombinant proteins and were both found to be bound by cross-reacting rabbit anti-mouse SHIP-1 pAb. The anti-mouse SHIP-1 pAb also reacted with cell lysates from the cytotoxic T cell lines, macrophages and stimulated PBL. SHIP-1 is also phosphorylated at a conserved tyrosine residue, as shown by immunoprecipitation studies.

  11. Reduction of Listeria monocytogenes in raw catfish fillets by essential oils and phenolic constituent carvacrol.

    PubMed

    Desai, Monil A; Soni, Kamlesh A; Nannapaneni, Ramakrishna; Schilling, M Wes; Silva, Juan L

    2012-09-01

    The antimicrobial activity of various essential oils and carvacrol was determined on fresh raw catfish fillets against a 4-strain Listeria monocytogenes mixture representing serotypes 1/2b, 3b, 4b, and 4c that were predominantly isolated from catfish processing environments. Thyme oil, oregano oil and carvacrol exhibited concentration and time dependent responses in broth against L. monocytogenes; for example 0.5% concentrations resulted in 4 log CFU/mL reduction within 30 min whereas 0.1% concentrations required more than 24 h for the same level of reduction. Lemon, orange, and tangerine oils, at 0.5% showed listeriostatic effect in which 4 log CFU/mL of the initial L. monocytogenes load was unchanged at 4 °C in 10 d whereas 1% concentrations were listericidal in a time dependent manner. Apart from carvacrol, efficacy of tested essential oils in reducing L. monocytogenes and total microbial load from catfish fillet was very limited. Dipping treatment of catfish fillets in 2% carvacrol solution for 30 min at 4 °C reduced L. monocytogenes to an undetectable level from their initial load of 5 log CFU/g and reduced total microbial load from catfish fillets by approximately 5 log CFU/g. In sensory analysis trained panelist preferred control samples over 2% carvacrol treated samples implying potential limitation in applicability of carvacrol for fillet treatments. PMID:22901012

  12. Nutritional impacts on gene expression in the surface mucosa of blue catfish (Ictalurus furcatus).

    PubMed

    Li, Chao; Beck, Benjamin H; Peatman, Eric

    2014-05-01

    Short-term feed deprivation is a common occurrence in both wild and farmed fish species, due to reproductive processes, seasonal variations in temperature, or in response to a disease outbreak. Fasting can have dramatic physiological and biological consequences for fish, including impacts on mucosal immunity which can, in turn, change host susceptibility to pathogens. Culture and selection of blue catfish (Ictalurus furcatus) has gained importance as the production of a channel catfish×blue catfish (Ictalurus punctatus×I. furcatus) hybrid has increased in the Southeast US. Following a recent examination of fasting-induced impacts on mucosal immunity in channel catfish, here we utilized Illumina-based RNA-seq expression profiling to compare changes in blue catfish gill and skin after a brief (7 day) period of fasting. Transcriptome sequencing and de novo assembly of over 194 million 100 base-pair transcript reads was followed by differential expression analysis. Fasting altered a total of 530 genes in the surface mucosa, including genes regulating the immune response, energy metabolism, mucus production, cellular cytoskeletal structure, cell proliferation, and antioxidant responses. In particular, fasting perturbed arginine synthesis and metabolism pathways in a manner likely altering macrophage activation states and immune readiness. Our findings highlight key mediators of the critical interaction between nutrition and immunity at points of pathogen adherence and entry.

  13. Mucosal expression signatures of two Cathepsin L in channel catfish (Ictalurus punctatus) following bacterial challenge.

    PubMed

    Wang, Renjie; Song, Lin; Su, Baofeng; Zhao, Honggang; Zhang, Dongdong; Peatman, Eric; Li, Chao

    2015-11-01

    The mucosal surfaces of fish are the first line of host defense against various pathogens. The mucosal immune responses are the most critical events to prevent pathogen attachment and invasion. Cathepsins are a group of peptidases that involved in different levels of immune responses, but the knowledge of the roles of Cathepsin in mucosal immune responses against bacterial infection are still lacking. Therefore, in the present study we characterized the Cathepsin L gene family in channel catfish, and profiled their expression levels after challenging with two different Gram-negative bacterial pathogens. Here, two Cathepsin L genes were identified from channel catfish and were designated CTSL1a and CTSL.1. Comparing to other fish species, the catfish CTSL genes are highly conserved in their structural features. Phylogenetic analysis was conducted to confirm the identification of CTSL genes. Expression analysis revealed that the CTSL genes were ubiquitously expressed in all tested tissues. Following infection, the CTSL genes were significantly induced at most timepoints in mucosal tissues. But the expression patterns varied depending on both pathogen and tissue types, suggesting that CTSL genes may exert disparate functions or exhibit distinct tissue-selective roles in mucosal immune responses. Our findings here, clearly revealed the key roles of CTSL in catfish mucosal immunity; however, further studies are needed to expand functional characterization and examine whether CTSL may also play additional physiological roles in catfish mucosal tissues. PMID:26434716

  14. Diet and population metrics of the introduced blue catfish population in the Altamaha, River, GA

    USGS Publications Warehouse

    Bonvechio, Timothy F.; Jennings, Cecil A.

    2011-01-01

    Blue catfish (Ictalurus furcatus) were first detected in the Altamaha River, Georgia, during an access creel survey in 2005 and subsequently in 2006 during annual ictalurid sampling. Introduction of this species in the Altamaha River is believed to have occurred via escape from normal upstream reservoir releases from Lake Sinclair and Lake Oconee. Relative abundance, as indexed by electrofishing catch rate (fish per hour), has increased from 2.9±1.0 SE in 2006 to 38.8±8.2 SE in 2011. The size of blue catfish captured ranged from 56 to 820 mm total length and 0.001 to 7.7 kg. Using otoliths obtained in 2010 (n=214), age of fish ranged from 0 to 6 yrs, which indicated a relatively young population. The catch-curve analysis resulted in an instantaneous mortality rate (Z) of 0.75. Despite concerns of blue catfish predation on native fishes and mussels, a diet analysis of blue catfish (n=257) obtained in 2010 revealed that diets of fish in all size groups were dominated by the introduced Asiatic clam (Corbicula fluminea). This study describes a recently introduced blue catfish population in an Atlantic coastal plain river and provides insight on possible ecological effects during the early phases of establishment. These results offer an early status assessment of the invasion dynamics before the system has had time to reach a new equilibrium state.

  15. Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies

    SciTech Connect

    Catfish Genome Consortium; Wang, Shaolin; Peatman, Eric; Abernathy, Jason; Waldbieser, Geoff; Lindquist, Erika; Richardson, Paul; Lucas, Susan; Wang, Mei; Li, Ping; Thimmapuram, Jyothi; Liu, Lei; Vullaganti, Deepika; Kucuktas, Huseyin; Murdock, Christopher; Small, Brian C; Wilson, Melanie; Liu, Hong; Jiang, Yanliang; Lee, Yoona; Chen, Fei; Lu, Jianguo; Wang, Wenqi; Xu, Peng; Somridhivej, Benjaporn; Baoprasertkul, Puttharat; Quilang, Jonas; Sha, Zhenxia; Bao, Baolong; Wang, Yaping; Wang, Qun; Takano, Tomokazu; Nandi, Samiran; Liu, Shikai; Wong, Lilian; Kaltenboeck, Ludmilla; Quiniou, Sylvie; Bengten, Eva; Miller, Norman; Trant, John; Rokhsar, Daniel; Liu, Zhanjiang

    2010-03-23

    Background-Through the Community Sequencing Program, a catfish EST sequencing project was carried out through a collaboration between the catfish research community and the Department of Energy's Joint Genome Institute. Prior to this project, only a limited EST resource from catfish was available for the purpose of SNP identification. Results-A total of 438,321 quality ESTs were generated from 8 channel catfish (Ictalurus punctatus) and 4 blue catfish (Ictalurus furcatus) libraries, bringing the number of catfish ESTs to nearly 500,000. Assembly of all catfish ESTs resulted in 45,306 contigs and 66,272 singletons. Over 35percent of the unique sequences had significant similarities to known genes, allowing the identification of 14,776 unique genes in catfish. Over 300,000 putative SNPs have been identified, of which approximately 48,000 are high-quality SNPs identified from contigs with at least four sequences and the minor allele presence of at least two sequences in the contig. The EST resource should be valuable for identification of microsatellites, genome annotation, large-scale expression analysis, and comparative genome analysis. Conclusions-This project generated a large EST resource for catfish that captured the majority of the catfish transcriptome. The parallel analysis of ESTs from two closely related Ictalurid catfishes should also provide powerful means for the evaluation of ancient and recent gene duplications, and for the development of high-density microarrays in catfish. The inter- and intra-specific SNPs identified from all catfish EST dataset assembly will greatly benefit the catfish introgression breeding program and whole genome association studies.

  16. Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies

    PubMed Central

    2010-01-01

    Background Through the Community Sequencing Program, a catfish EST sequencing project was carried out through a collaboration between the catfish research community and the Department of Energy's Joint Genome Institute. Prior to this project, only a limited EST resource from catfish was available for the purpose of SNP identification. Results A total of 438,321 quality ESTs were generated from 8 channel catfish (Ictalurus punctatus) and 4 blue catfish (Ictalurus furcatus) libraries, bringing the number of catfish ESTs to nearly 500,000. Assembly of all catfish ESTs resulted in 45,306 contigs and 66,272 singletons. Over 35% of the unique sequences had significant similarities to known genes, allowing the identification of 14,776 unique genes in catfish. Over 300,000 putative SNPs have been identified, of which approximately 48,000 are high-quality SNPs identified from contigs with at least four sequences and the minor allele presence of at least two sequences in the contig. The EST resource should be valuable for identification of microsatellites, genome annotation, large-scale expression analysis, and comparative genome analysis. Conclusions This project generated a large EST resource for catfish that captured the majority of the catfish transcriptome. The parallel analysis of ESTs from two closely related Ictalurid catfishes should also provide powerful means for the evaluation of ancient and recent gene duplications, and for the development of high-density microarrays in catfish. The inter- and intra-specific SNPs identified from all catfish EST dataset assembly will greatly benefit the catfish introgression breeding program and whole genome association studies. PMID:20096101

  17. Biofacies zonation of middle Miocene benthic foraminifera, southeastern San Joaquin basin, California

    SciTech Connect

    Olson, H.C.

    1987-05-01

    The quantitative distribution of benthic foraminifera across the middle Miocene margin of the southeastern San Joaquin basin constitutes a useful tool in applying benthic biofacies zonation to the interpretation of marine paleoenvironments. A middle Miocene transect (near the Luisian/Relizian boundary) was completed across the margin of the southeastern San Joaquin basin near Bakersfild, California. Surface and subsurface fauna encompass strandline through bathyal environments. Quantitative analyses of these fauna result in a useful biofacies zonation for the middle Miocene which can be applied to the interpretation of middle Miocene paleobathymetric and paleogeographic reconstructions, basin analysis, and subsidence histories of the San Joaquin basin. In addition, these data suggest that vertical faunal migration of continental slope fauna has occurred between the middle Miocene and Recent. During the early and middle Miocene, marine temperatures were warmer than today and lower latitudinal gradients prevailed. Stepwise climatic cooling since the middle Miocene has been accompanied by the latitudinal adjustment of surface isotherms, strengthening of the permanent thermocline, and the associated migration of temperature-sensitive planktonic and benthic biofacies. Sedimentologic and seismic evidence in the southeastern San Joaquin basin suggests that present-day lower bathyal biofacies may have been at shallower depths during the middle Miocene. Such migrations would have a significant impact on paleoenvironmental interpretations. Middle Miocene faunal transects from the southeastern San Joaquin basin are compared with equivalent Holocene transects from the eastern Pacific, and differences are discussed in light of this proposal.

  18. Electric Organ Discharges of Mormyrid Fish as a Possible Cue for Predatory Catfish

    NASA Astrophysics Data System (ADS)

    Hanika, S.; Kramer, B.

    During reproductive migration the electroreceptive African sharptooth catfish, Clarias gariepinus (Siluriformes), preys mainly on a weakly electric fish, the bulldog Marcusenius macrolepidotus (Mormyridae; Merron 1993). This is puzzling because the electric organ discharges of known Marcusenius species are pulses of a duration (<1ms) too short for being detected by the catfishes' low-frequency electroreceptive system (optimum sensitivity, 10-30Hz Peters and Bretschneider 1981). On the recent discovery that M. macrolepidotus males emit discharges lasting approximately ten times longer than those of females (Kramer 1997a) we determined behavioral thresholds for discharges of both sexes, using synthetic playbacks of field-recorded discharges. C. gariepinus detected M. macrolepidotus male discharges down to a field gradient of 103μVpeak-peak/cm and up to a distance of 1.5m at natural field conditions. In contrast, thresholds for female discharges were not reached with our setup, and we presume the bulldogs eaten by catfish are predominantly male.

  19. Seasonal migration and homing of channel catfish in the lower Wisconsin River, Wisconsin

    USGS Publications Warehouse

    Pellett, Thomas D.; Van Dyck, Gene J.; Adams, Jean V.

    1998-01-01

    A multiyear tag and recapture study was conducted to determine whether channel catfishIctalurus punctatus were migratory and if they had strong homing tendencies. Over 10,000 channel catfish were tagged from the lower Wisconsin River and adjacent waters of the upper Mississippi River during the 3-year sampling period. Data on movements were obtained from study recaptures and through tag returns and harvest information provided by sport anglers and commercial fishers. Channel catfish occupied relatively small home ranges during summer, migrated downstream to the upper Mississippi River in autumn, then migrated back up the Wisconsin River in spring to spawn and to occupy the same summer home sites they had used in previous summers. Fish size was a factor in the degree of fidelity to summer home sites, with larger fish showing greater fidelity.

  20. Some enzymatic properties of brain Acetylcholinesterase from bluegill and channel catfish

    USGS Publications Warehouse

    Hogan, James W.; Knowles, Charles O.

    1968-01-01

    Using a manometric technique an acetylcholinesterase (EC 3.1.1.7, acetylcholine acetyl-hydrolase) was demonstrated in brain tissue from the bluegill, Lepomis macrochirus Rafinesque, and the channel catfish, Ictalurus punctatus (Walbaum). The activities were 19 and 37 μmoles acetylcholine hydrolyzed/milligram protein per hour for the bluegill and channel catfish enzymes, respectively. The optimum substrate concentration for the hydrolysis of acetylcholine was 10 mMfor the enzymes from both species. Generally, the catfish acetylcholinesterase was somewhat more susceptible than the bluegill to the inhibitors tested; however, the bluegill enzyme was more susceptible to inhibition by malathion and malaoxon.

  1. Two cases of lymphosarcoma in channel catfish exposed to N-methyl-N'-nitro-N-nitrosoguanidine.

    PubMed

    Chen, H H; Brittelli, M R; Muska, C F

    1985-04-01

    Of 158 channel catfish (Ictalurus punctatus) exposed to N-methyl-N'-nitro-N-nitrosoguanidine [(MNNG) CAS:70-25-7] in water for 28 days, 2 developed disseminated lymphosarcoma. One fish was necropsied at 12 months and another at 18 months following exposure. Both fish had a massive neoplastic infiltration of the bilateral pairs of head and trunk kidneys from which the neoplastic cells appeared to originate. The neoplastic infiltration was also observed in the following: thymus, gills, oral mucosa, liver, skin, skeletal muscle of head-neck region, and to a lesser extent spleen and bone marrow. This is probably the first report of lymphosarcoma in channel catfish. Although the occurrence of lymphosarcoma in these 2 catfish appeared to be related to exposure to MNNG, the exact role MNNG played in the tumor formation was not determined. PMID:3857387

  2. Behaviors of southwestern native fishes in response to introduced catfish predators

    USGS Publications Warehouse

    Ward, David L.; Figiel, Chester R.

    2013-01-01

    Native fishes reared in hatcheries typically suffer high predation mortality when stocked into natural environments. We evaluated the behavior of juvenile bonytail Gila elegans, roundtail chub Gila robusta, razorback sucker Xyrauchen texanus, and Sonora sucker Catostomus insignis in response to introduced channel catfish Ictalurus punctatus and flathead catfish Pylodictis olivaris. Our laboratory tests indicate these species did not inherently recognize catfish as a threat, but they can quickly (within 12 h) change their behavior in response to a novel predator paired with the sight and scent of a dead conspecific. Chubs appear to avoid predation by swimming away from the threat, whereas suckers reduced movement. Effects of antipredator conditioning on survival of fish reared in hatcheries is unknown; however, our results suggest some native fish can be conditioned to recognize introduced predators, which could increase poststocking survival.

  3. Transcriptomic Analyses Reveal Novel Genes with Sexually Dimorphic Expression in Yellow Catfish (Pelteobagrus fulvidraco) Brain.

    PubMed

    Lu, Jianguo; Zheng, Min; Zheng, Jiajia; Liu, Jian; Liu, Yongzhuang; Peng, Lina; Wang, Pingping; Zhang, Xiaofeng; Wang, Qiushi; Luan, Peixian; Mahbooband, Shahid; Sun, Xiaowen

    2015-10-01

    Yellow catfish (Pelteobagrus fulvidraco) is a pivotal freshwater aquaculture species in China. It shows sexual size dimorphism favoring male in growth. Whole transcriptome approach is required to get the overview of genetic toolkit for understanding the sex determination mechanism aiming at devising its monosex production. Beside gonads, the brain is also considered as a major organ for vertebrate reproduction. Transcriptomic analyses on the brain and of different developmental stages will provide the dynamic view necessary for better understanding its sex determination. In this regard, we have performed a de novo assembly of yellow catfish brain transcriptome by high throughput Illumina sequencing. A total number of 154,507 contigs were obtained with the lengths ranging from 201 to 27,822 bp and N50 of 2,101 bp, as well as 20,699 unigenes were identified. Of these unigenes, 13 and 54 unigenes were detected to be XY-specifically expressed genes (SEGs) for one and 2-year-old yellow catfish, while the corresponding numbers of XX-SEGs for those two stages were 19 and 13, respectively. Our work identifies a set of annotated genes that are candidate factors affecting sexual dimorphism as well as simple sequence repeat (SSR) and single nucleotide variation (SNV) in yellow catfish. To validate the expression patterns of the sex-related genes, we performed quantitative real-time PCR (qRT-PCR) indicating the reliability and accuracy of our analysis. The results in our study may enhance our understanding of yellow catfish sex determination and potentially help to improve the production of all-male yellow catfish for aquaculture. PMID:26242754

  4. Optimization and physical properties of gelatin extracted from pangasius catfish (Pangasius sutchi) bone.

    PubMed

    Mahmoodani, F; Ardekani, V Sanaei; See, S F; Yusop, S M; Babji, A S

    2014-11-01

    In the present study, to establish the optimum gelatin extraction conditions from pangasius catfish (Pangasius sutchi) bone, Response Surface Methodology (RSM) with a 4-factor, 5-level Central Composite Design (CCD) was conducted. The model equation was proposed with regard to the effects of HCl concentration (%, X1), treatment time (h, X2), extraction temperature (°C, X3) and extraction time (h, X4) as independent variables on the hydroxyproline recovery (%, Y) as dependent variable. X 1 = 2.74 %, X 2 = 21.15 h, X 3 = 74.73 °C and X 4 = 5.26 h were found to be the optimum conditions to obtain the highest hydroxyproline recovery (68.75 %). The properties of optimized catfish bone gelatin were characterized by amino acid analysis, SDS-PAGE, gel strength, TPA and viscosity in comparison to bovine skin gelatin. The result of SDS-PAGE revealed that pangasius catfish bone gelatin consisted of at least 2 different polypeptides (α1 and α2 chains) and their cross-linked chains. Moreover, the pangasius catfish bone gelatin was found to contain 17.37 (g/100 g) imino acids (proline and hydroxyproline). Pangasius catfish bone gelatin also indicated physical properties comparable with that of bovine and higher than those from cold water fish gelatin. Based on the results of the present study, there is a potential for exploitation of pangasius catfish bone for gelatin production. Furthermore, RSM provided the best method for optimizing the gelatin extraction parameters. PMID:26396302

  5. Efficacy of formalin and hydrogen peroxide to increase survival of channel catfish infected with saprolegniasis

    USGS Publications Warehouse

    Rach, J.J.; Schreier, T.; Gaikowski, M.P.; Schleis, S.M.

    2005-01-01

    The efficacy of formalin and hydrogen peroxide to increase survival associated with external saprolegniasis on fingerlings of channel catfish Ictalurus punctatus was evaluated in four laboratory trials. Fungal epizootics were initiated according to procedures developed in a fungal-disease model. Fish were abraded with a dremel tool and then placed in an aerated static infection tank containing fungal-infected hemp seeds held in teaballs that were suspended in 100 L of water for 24 h (trials 1-3) or 6 h (trial 4). In the formalin trials, treatment regimens of 0, 82, and 166 mg/L (trial 1) or 0 and 83 mg/L (trial 2) were administered to channel catfish for 60 min once every other day for a total of three treatments (trial 1) or once daily for a total of seven treatments (trial 2). In the hydrogen peroxide trials, treatment regimens of 0, 75, and 102 mg/L (trial 3) or 0 and 75 mg/L (trial 4) were administered to channel catfish for 60 min once every other day for a total of three treatments. Each treatment regimen was tested in triplicate, with 10 fish per replicate. Formalin exposures of 83 (seven treatments; 33% survival) and 166 mg/L (three treatments; 63% survival) for 60 min significantly (P <= 0.01) increased channel catfish survival in comparison with controls (of which 3% and 13%, respectively, survived). In trial 4, hydrogen peroxide exposure of 75 mg/L (63% survival) for 60 min significantly (P <= 0.01) increased channel catfish survival in comparison with the untreated controls (13% survival). Formalin and hydrogen peroxide treatments were effective in increasing survival in channel catfish infected with fungus.

  6. Catfish consumption as a contributor to elevated PCB levels in a non-Hispanic black subpopulation.

    PubMed

    Weintraub, Max; Birnbaum, Linda S

    2008-07-01

    The human body burden of polychlorinated biphenyls (PCBs) sharply declined after production was banned in the US in 1979. For the 10% of the US population that remains most exposed to PCBs, fish consumption is the primary source. National Health and Nutrition Examination Survey (NHANES) data indicates that the highest remaining PCB levels exist in a non-Hispanic black subpopulation. Our review suggests that catfish consumption may be a significant PCB source for the one million non-Hispanic black anglers who fish for catfish. In comparison to non-Hispanic white anglers, non-Hispanic black anglers consume more catfish, are more likely to eat the whole fish rather than just the fillets that contain less PCBs, and are more likely to fish in watersheds with high PCB contamination. Efforts to diminish potential racial disparities in PCB exposure are challenged by geographic, economic, cultural, and educational barriers. In response, we propose that a fish consumption survey be performed that identifies the extent of subsistence fishing by non-Hispanic black anglers for catfish in watersheds with PCB contamination, the type and quantity of catfish subsistence fishing provides, and what actions would help moderate PCB exposure due to subsistence fishing for catfish in such areas. Understanding the contamination and consumption factors that contribute to higher PCB body burdens will help identify and offer solutions to racial disparities in exposure to PCBs due to subsistence fishing while providing a model to prevent similar disparities in exposure to toxics ranging from mercury to polybrominated diphenyl ethers. PMID:18407261

  7. Middle Miocene Displacement Along the Rand Detachment Fault, Rand Mountains

    NASA Astrophysics Data System (ADS)

    Shulaker, D. Z.; Grove, M. J.

    2015-12-01

    Laramide flat-slab subduction extinguished Sierra Nevada pluton emplacement in southern California by ca. 85 Ma as trench-derived sediments were underthrust and accreted beneath arc basement. These relationships are well illustrated in the Rand Mountains, situated just south of the Garlock fault in the northwestern Mojave Desert. Here, accreted rocks within the Rand Mountains are referred to as Rand Schist. The Rand Detachment fault juxtaposes Rand Schist beneath 87 Ma Sierran granitoids. New zircon (U-Th)/He age results from schist and basement juxtaposed across the Rand Detachment fault are 15 ± 3 Ma and 30 ± 5 Ma, respectively. When considered within the context of previously reported thermochronology from the Rand Mountains, our data shows that the Rand Detachment fault in the Rand Mountains is a middle Miocene fault that facilitated extension of the northwest Mojave Desert. This timing is in temporal and spatial agreement with regional extension throughout the Mojave triggered by northern migration of the slab window after collision of the Mendocino Triple Junction with the southern California margin. Further evidence of slab-window-related magmatism in the easternmost Rand Mountains is provided by the 19 Ma Yellow Aster pluton and 19 Ma rhyolite porphyry. It is possible that Miocene extension re-activated an older structure within the Rand Mountains. For example, a similar low-angle fault juxtaposing schist and basement present in the San Emigdio Mountains is believed to have accommodated large scale Late Cretaceous displacement, exhuming Rand Schist and overlying deepest Sierran basement to shallow crustal levels by 77 Ma [1]. However, 68-72 Ma phengite cooling ages and other thermochronology from the Rand Mountains indicates that any pre-Miocene extension in this area must postdate that in the San Emigdio Mountains. [1] Chapman et al., 2012. Geosphere, 8, 314-341.

  8. Rotation history of Chios Island, Greece since the Middle Miocene

    NASA Astrophysics Data System (ADS)

    Kondopoulou, D.; Sen, S.; Aidona, E.; van Hinsbergen, D. J. J.; Koufos, G.

    2011-05-01

    Superimposed on a regional pattern of oroclinal bending in the Aegean and west Anatolian regions, the coastal region of western Anatolia, shows a complex and chaotic pattern of coexisting clockwise and counterclockwise rotations. Here, we report new palaeomagnetic data from the eastern Aegean island of Chios, to test whether this fits the regional palaeomagnetic pattern associated with the Aegean orocline, or should be included in the narrow zone of chaotic palaeomagnetic directions. Therefore, a combined palaeomagnetic study of Miocene sediments and volcanic rocks has been carried out. Thermal and AF demagnetization of a 130-m thick Middle Miocene succession from the Michalos claypit allowed a stable component of both polarities to be isolated while rock magnetic experiments showed that the main magnetic carrier is magnetite. When compared with the Eurasian reference, the mean declination of 348 ± 5.1° implies 15° of counterclockwise rotation since Middle Miocene times. The obtained shallow inclination of 38 ± 6.7° was corrected to 61.8 ± 3.9°, by applying the elongation/inclination correction method for inclination shallowing. This result is similar to the expected inclination of 58° for the latitude of Chios. The palaeomagnetic analysis (demagnetization treatment and corresponding rock magnetic measurements) of the volcanic rocks identify a stable, predominantly normal, ChRM with poorly constrained mean declination of about 290 ± 19.8° based on five successfully resolved components. The significantly different palaeomagnetic results obtained from an island as small as Chios (and a very short distance), and the relatively large rotation amounts do not fit the regional palaeomagnetic direction of Lesbos and basins in northwestern Turkey which show little or no significant rotation. We thus prefer to include Chios in the coastal zone of chaotic rotations, which may represent a previously inferred tectonic transfer zone that accommodates lateral

  9. Feasibility studies of using the Catfish Immune System to produce monoclonal antibodies

    SciTech Connect

    Poston, T.M.

    1987-03-01

    The objective of these studies was to determine the feasibility of using a teleost cell line to produce monoclonal antibodies. Studies were undertaken to demonstrate the production of a polyclonal response of channel catfish (Icatalurus punctatus) challenged with mycotoxins coupled to a protein carrier. Companion studies were also performed to induce a permanent cell line with catfish lymphocytes. Attempts to demonstrate a polyclonal response to haptenized mycotoxins were inconclusive. Tests to induce an immortal, permanent cell line with benzene and x-ray irradiated cells were also inconclusive. 3 refs., 13 tabs.

  10. Sublethal copper stress and susceptibility of channel catfish to experimental infections with Ichthyophthirius multifiliis

    SciTech Connect

    Ewing, M.S.; Ewing, S.A.; Zimmer, M.A.

    1982-06-01

    The study describes a technique for evaluating the change in susceptibility of channel catfish (Ictalurus punctatus) to infection by the protozoan parasite Ichthyophthirius multifiliis following exposure to sublethal concentrations of dissolved copper. This ubiquitous parasite infects a wide variety of freshwater fishes and causes severe disease problems in catfish. Exposure to sublethal concentrations of contaminants may amplify stress significantly for fish exposed to such disease agents. Therefore, techniques are needed to judge the effect of contaminant stress upon the course of disease, rather than simply death from disease, in fishes. Results show that pathologic changes attendent upon exposure to the parasite and those upon exposure to copper are complementary in effect. (JMT)

  11. Suspended spawning cans for channel catfish in a surface-mine lake. [Ictalurus punctatus

    SciTech Connect

    Moy, P.B.; Stickney, R.R.

    1987-01-01

    A technique was developed to enable channel catfish (Ictalurus punctatus) to spawn in lakes where sufficient spawning habitat is not available. Forty-five-liter spawning cans were suspended from styrofoam floats at a depth of 1.25 m below the water surface, in water that was 2-5 m deep. Brood fish successfully utilized the containers for spawning, and the presence of eggs in sunken containers suggests that channel catfish will spawn successfully at depths of up to 5 m if satisfactory nesting sites are available.

  12. Miocene phosphate-rich sediments in Salento (southern Italy)

    NASA Astrophysics Data System (ADS)

    Föllmi, Karl B.; Hofmann, Hélène; Chiaradia, Massimo; de Kaenel, Eric; Frijia, Gianluca; Parente, Mariano

    2015-08-01

    The upper Middle to lower Upper Miocene (Serravallian to Tortonian) sedimentary succession in Salento (southern Italy) includes glauconite- and phosphate-rich deposits, which are associated with pelagic micrite. In Baia del Ciolo and Marittima (southern Salento), the succession is composed of shallow-water platform carbonates of Late Oligocene age (Chattian; Porto Badisco Formation), which are overlain by a 20- to 30-cm-thick level of glauconite-rich micrite with abundant reworked particles and fossils of the underlying Porto Badisco Formation. This interval is in turn covered by an up to 15 cm thick phosphatic crust ("Livello ad Aturia"), which itself is overlain either by a hemipelagic chalk-like carbonate of Middle to Late Miocene age ("Pietra Leccese"; Marittima) or directly by a micrite of Late Miocene age (Messinian; Novaglie Formation; Baia del Ciolo), which shallows upwards into a shallow-water platform carbonate. A large hiatus is present in this succession, which likely includes the Lower and lower Middle Miocene. In the region of Lecce, two discrete levels enriched in glauconite and phosphate-each associated with a major discontinuity-occur within the Pietra Leccese. The strontium-isotope ages derived on phosphate nodules and phosphatized and non-phosphatized fossils and calcareous nannofossil ages indicate a time interval of phosphogenesis between 13.5 and 7.5 Ma, with two clusters at 12 and 10.5 Ma. The glauconite and phosphate-rich sediments resulted from a current-dominated regime, which was characterized by low overall sedimentation rates, erosion and sediment reworking, and authigenesis. This regime was likely related to a generally westward-directed bottom current, which was forced to upwell once it arrived at the western border of the eastern Mediterranean basin. The timing of the principal phosphogenic phases can only partly be correlated to those of other occurrences in this part of the Mediterranean (Malta, Gozo, southern Sicily, Matese

  13. Miocene reef facies of pelagian block, central Mediterranean

    SciTech Connect

    Pedley, H.M.

    1988-02-01

    Miocene reefs outcrop in the Maltese Islands, southeastern Sicily, and the pelagian island of Lampedusa. Several rapid eustatic sea level fluctuations affected these late Tortonian-early Messinian build-ups; normal salinities appear to have been maintained during these events. In addition to sea floor topography, reef development appears to have been controlled by turbulence. Encruster-dominated patch reefs are typical of platform and shallow ramp situations where turbulence is high. Branching and massive coral assemblages are typical of fore-reef curtains and steep slope substrates.

  14. Early Miocene mylonitization and detachment faulting, South Mountains, central Arizona

    SciTech Connect

    Reynolds, S.J.; Shafiqullah, M.; Damon, P.E.; DeWitt, E.

    1986-04-01

    The South Mountains of central Arizona are one of the geologically simplest metamorphic core complexes of the North American Cordillera. An early Miocene age of mylonitization is indicated by crosscutting relationships between mylonitic fabric and a composite pluton dated at 22-25 Ma by Rb-Sr, U-Th-Pb, and K-Ar techniques. The kinematic agreement and close temporal association of mylonitization and detachment faulting support models in which the two processes are related to an evolving crustal shear zone that accommodated mid-Tertiary continental extension. 19 references, 3 figures, 2 tables.

  15. The beaver Anchitheriomys from the Miocene of Central Europe

    SciTech Connect

    Stefen, C.; Mors, T.

    2008-09-15

    New finds of teeth and mandibles of Anchitheriomys from the Hambach opencast lignite mine in Northwest Germany and the first detailed descriptions of other mandibles from South Germany and Switzerland allow a review of the Central European specimens of this rare beaver genus. The metric variation of cheek teeth and especially the great differences in dimensions of incisors can be much better assessed. The observed range in size can be attributed to ontogenetic changes, and all material is assigned to Anchitheriomys suevicus. Stratigraphically, this species is restricted to the early middle Miocene, European Mammalian Neogene biozones MN 5-6.

  16. Elicitation of macrophages from the peritoneal cavity of channel catfish

    USGS Publications Warehouse

    Jenkins, J.A.; Klesius, P.H.

    1998-01-01

    Four chemicals were evaluated for elicitation of macrophages in peritoneal cavities of 250-300g healthy channel catfish Ictalurus punctatus. Cellular exudates were collected at 3, 5, 7, 10, 14, and 20 d following intraperitoneal injections with squalene, Freund's incomplete adjuvant (FIA), goat serum, thioglycollate, or as a control, phosphate-buffered saline. Injection with either squalene or FIA induced significantly greater (P ??? 0.0001) macrophage recruitment than the other chemicals. The effectiveness of squalene and FIA was compared further by macrophage collection daily for 7 d. Squalene and FIA elicited similarly high macrophage responses (P ??? 0.0450), the highest being 3.43 x 106 macrophages/mL (SE, 2.4 x l06) at 99% purity at day 2 and 2.1 X 106 macrophages/mL (SE, 0.7 x 106) at day 14 at 80% purity, respectively. In both experiments, the time after injection was not statistically significant, nor was there an interaction between time and chemicals. The occurrence of cells other than macrophages decreased with time to yield macrophage recoveries of 47-99% for squalene and 30-80% for FIA. Two subsets of macrophages were observed by means of flow cytometry. As demonstrated by chemiluminescence, the squalene-elicited cells produced high-energy oxygen compounds important to the phagocytic process.

  17. A standardized sampling protocol for channel catfish in prairie streams

    USGS Publications Warehouse

    Vokoun, Jason C.; Rabeni, Charles F.

    2001-01-01

    Three alternative gears—an AC electrofishing raft, bankpoles, and a 15-hoop-net set—were used in a standardized manner to sample channel catfish Ictalurus punctatus in three prairie streams of varying size in three seasons. We compared these gears as to time required per sample, size selectivity, mean catch per unit effort (CPUE) among months, mean CPUE within months, effect of fluctuating stream stage, and sensitivity to population size. According to these comparisons, the 15-hoop-net set used during stable water levels in October had the most desirable characteristics. Using our catch data, we estimated the precision of CPUE and size structure by varying sample sizes for the 15-hoop-net set. We recommend that 11–15 repetitions of the 15-hoop-net set be used for most management activities. This standardized basic unit of effort will increase the precision of estimates and allow better comparisons among samples as well as increased confidence in management decisions.

  18. Touch sensation by pectoral fins of the catfish Pimelodus pictus.

    PubMed

    Hardy, Adam R; Steinworth, Bailey M; Hale, Melina E

    2016-02-10

    Mechanosensation is fundamental to many tetrapod limb functions, yet it remains largely uninvestigated in the paired fins of fishes, limb homologues. Here we examine whether membranous fins may function as passive structures for touch sensation. We investigate the pectoral fins of the pictus catfish (Pimelodus pictus), a species that lives in close association with the benthic substrate and whose fins are positioned near its ventral margin. Kinematic analysis shows that the pectoral fins are held partially protracted during routine forward swimming and do not appear to generate propulsive force. Immunohistochemistry reveals that the fins are highly innervated, and we observe putative mechanoreceptors at nerve fibre endings. To test for the ability to sense mechanical perturbations, activity of fin ray nerve fibres was recorded in response to touch and bend stimulation. Both pressure and light surface brushing generated afferent nerve activity. Fin ray nerves also respond to bending of the rays. These data demonstrate for the first time that membranous fins can function as passive mechanosensors. We suggest that touch-sensitive fins may be widespread in fishes that maintain a close association with the bottom substrate. PMID:26865307

  19. Thidiazuron uptake, distribution and metabolism in bluegills and channel catfish.

    PubMed

    Knowles, C O; Benezet, H J; Mayer, F L

    1980-01-01

    Bluegills (Lepomis macrochirus) exposed to 0.1 ppm of thidiazuron-14C cotton defoliant for 28 days under continuous flow conditions accumulated relatively low levels of radiocarbon. The maximum detected was 5.4 ppm in fillet tissue after 1 day. During a 14 day depuration period, radioactivity declined to 1.0 ppm or less. Fractionation of offal and fillet tissues from bluegills collected at 28 days indicated that most of the radioactive material was water soluble, although appreciable amounts of organosoluble radioactive material also were present. When bluegills were injected intraperitoneally with thidiazuron-14C, metabolism and elimination were relatively rapid. Organosoluble radioactive material isolated from fish tissue included thidiazuron, its 2-hydroxyphenyl derivative, phenylurea, and several unknowns. Channel catfish (Ictalurus punctatus) exposed under static conditions to a system containing 0.15 ppm of thidiazuron-14C incorporated into soil also accumulated only low concentrations of radiocarbon. The maximum detected was 2.5 ppb in offal tissue at 7 days. In fillet tissue, radioactivity did not exceed 0.5 ppb. There was no evidence from these studies to indicate that thidiazuron would pose a hazard to the aquatic ecosystem. PMID:7400538

  20. Oxyropsis ephippia, a New Hypoptopomatine Catfish (Siluriformes: Loricariidae) from Guyana.

    PubMed

    Aquino, Adriana E; Pérez, Mark H Sabaj

    2016-01-01

    Oxyropsis ephippia, a new species of loricariid catfish in the subfamily Hypoptopomatinae, is described from the Essequibo and Branco basins, Guyana. Based on the presence of a keel-like row of relatively enlarged odontodes on trunk median plates immediately above the lateral line canal, the new species is assigned to the genus Oxyropsis Eigenmann & Eigenmann 1889. It can be distinguished from its congeners by having the keel-like row on each median plate dominated by a single odontode (one closest to the posterior margin of the plate) conspicuously larger than preceding ones, and by having the sides of the trunk below the median series (approximately between median plates 7 to 12) shielded only by plates of the midventral series, with the exclusion of plates from the ventral series. The report of O. ephippia from the Essequibo is the first record of the genus in a river system that drains the north-central portion of the Guiana Shield into the Atlantic Ocean. PMID:27395707

  1. Thidiazuron uptake, distribution and metabolism in bluegills and channel catfish.

    PubMed

    Knowles, C O; Benezet, H J; Mayer, F L

    1980-01-01

    Bluegills (Lepomis macrochirus) exposed to 0.1 ppm of thidiazuron-14C cotton defoliant for 28 days under continuous flow conditions accumulated relatively low levels of radiocarbon. The maximum detected was 5.4 ppm in fillet tissue after 1 day. During a 14 day depuration period, radioactivity declined to 1.0 ppm or less. Fractionation of offal and fillet tissues from bluegills collected at 28 days indicated that most of the radioactive material was water soluble, although appreciable amounts of organosoluble radioactive material also were present. When bluegills were injected intraperitoneally with thidiazuron-14C, metabolism and elimination were relatively rapid. Organosoluble radioactive material isolated from fish tissue included thidiazuron, its 2-hydroxyphenyl derivative, phenylurea, and several unknowns. Channel catfish (Ictalurus punctatus) exposed under static conditions to a system containing 0.15 ppm of thidiazuron-14C incorporated into soil also accumulated only low concentrations of radiocarbon. The maximum detected was 2.5 ppb in offal tissue at 7 days. In fillet tissue, radioactivity did not exceed 0.5 ppb. There was no evidence from these studies to indicate that thidiazuron would pose a hazard to the aquatic ecosystem.

  2. Morphology of the gas bladder in bumblebee catfishes (Siluriformes, Pseudopimelodidae).

    PubMed

    Birindelli, José L O; Shibatta, Oscar A

    2011-07-01

    The gross morphology of the gas bladder is described and compared for representatives of all valid genera of Pseudopimelodidae (Siluriformes). Cephalosilurus albomarginatus and species of Batrochoglanis, and Microglanis have the most basic form: a large, cordiform gas bladder with a simple internal T-shaped septum. Cephalosilurus apurensis, C. fowleri, and C. nigricauda also have a large, cordiform gas bladder, but they have well-developed trabeculae associated with the internal T-shaped septum, and a pair of well-developed constrictor muscles inserted on the external wall; the latter feature is present in most species of Pimelodidae, but absent in all other catfishes. The monotypic Lophiosilurus alexandri also has well-developed constrictor muscles, and its gas bladder is moderately sized. The species of Pseudopimelodus and Cruciglanis have a diminutive gas bladder partially divided into two lateral sacs without internal communication, and lack constrictor muscles. The parapophysis of the fourth vertebra is a wide and long shelf connected to the dorsal surface of the gas bladder in most pseudopimelodid genera. However, in the species of Pseudopimelodus and Cruciglanis the parapophysis of the fourth vertebra is shorter and has its anterior ramus folded back, partially covering the gas bladder anteroventrally; and the tympanic opening is smaller than in species of the other genera. Five phylogenetic characters are proposed based on the morphology of the gas bladder and associated structures in species of Pseudopimelodidae, and the evolution of those characters in the family is discussed. J. Morphol., 2011. © 2011 Wiley-Liss, Inc. PMID:21538478

  3. Chicken-type lysozyme in channel catfish: expression analysis, lysozyme activity, and efficacy as immunostimulant against Aeromonas hydrophila infection.

    PubMed

    Pridgeon, Julia W; Klesius, Phillip H; Dominowski, Paul J; Yancey, Robert J; Kievit, Michele S

    2013-09-01

    To understand whether chicken-type lysozyme (Lys-c) in channel catfish was induced by infection of Aeromonas hydrophila, the transcriptional levels of Lys-c in skin, gut, liver, spleen, posterior kidney, and blood cells in healthy channel catfish was compared to that in channel catfish infected with A. hydrophila by bath immersion. Quantitative PCR revealed that the transcription levels of Lys-c in infected catfish were significantly (P < 0.05) induced in all five tissues tested as well as in blood cells. Recombinant CC-Lys-c produced in Escherichia coli expression system (R-CC-Lys-c) exhibited significant (P < 0.05) lytic activity to Gram-positive Micrococcus lysodeikticus and Gram-negative A. hydrophila. When pcDNA3.2-vectored recombinant channel catfish lysozyme-c (pcDNA-Lys-c) was transfected in channel catfish gill cells G1B, the over-expression of pcDNA-Lys-c offered significant (P < 0.05) protection to G1B against A. hydrophila infection. When channel catfish were intraperitoneally injected with QCDCR adjuvant formulated pcDNA-Lys-c and challenged with a highly virulent A. hydrophila strain AL-09-71 at 1-, 2-, 14-, and 28-days post treatment, pcDNA-Lys-c offered 75%, 100%, 60%, and 77% protection to channel catfish, respectively. Macrophages of fish treated with pcDNA-Lys-c produced significantly (P < 0.05) higher amounts of reactive oxygen species and nitric oxide than that of fish treated with pcDNA vector alone. Taken together, our results suggest that pcDNA-Lys-c could be used as a novel immunostimulant to protect channel catfish against A. hydrophila infection.

  4. Upper Miocene reef complex of Mallorca, Balearic Islands, Spain

    SciTech Connect

    Pomar, L.

    1988-01-01

    The late Tortonian-Messinian coral reef platform of south Mallorca onlaps a folded middle late Miocene carbonate platform on which progradation of up to 20 km occurs. Vertical sea cliffs (up to 100 m high) superbly show the last 5 km of this progradation and complement the numerous water-well cores from the island interior. The coral reef platform consists of a series of progradational-accretional sequences and erosion surfaces of different orders of magnitude. The first-order sequence is bounded by significant erosion surfaces with breccias, major facies shifts, and vertical accretion. The second-order sequences show accretional events of up to 100 m thick with 1 to 2 km of progradation, and the third-order sequences occur in packages of tens of meters. Individual reef units are bounded by minor erosional surfaces and define the fourth-order sequences. This composite accretional-progradational architecture implies cyclic variations of relative sea level. Episodes of sea level rise were responsible for the vertical accretion. Sea level falls produced the erosional surfaces; most progradation occurred during lowering sea level episodes. This sedimentological framework of the Mallorca reef suggests late Miocene glacio-eustatic fluctuations of sea level similar to the Quaternary.

  5. Late Miocene hominids from the Middle Awash, Ethiopia.

    PubMed

    Haile-Selassie, Y

    2001-07-12

    Molecular studies suggest that the lineages leading to humans and chimpanzees diverged approximately 6.5-5.5 million years (Myr) ago, in the Late Miocene. Hominid fossils from this interval, however, are fragmentary and of uncertain phylogenetic status, age, or both. Here I report new hominid specimens from the Middle Awash area of Ethiopia that date to 5.2-5.8 Myr and are associated with a wooded palaeoenvironment. These Late Miocene fossils are assigned to the hominid genus Ardipithecus and represent the earliest definitive evidence of the hominid clade. Derived dental characters are shared exclusively with all younger hominids. This indicates that the fossils probably represent a hominid taxon that postdated the divergence of lineages leading to modern chimpanzees and humans. However, the persistence of primitive dental and postcranial characters in these new fossils indicates that Ardipithecus was phylogenetically close to the common ancestor of chimpanzees and humans. These new findings raise additional questions about the claimed hominid status of Orrorin tugenensis, recently described from Kenya and dated to approximately 6 Myr.

  6. Late Miocene magnetostratigraphy, biostratigraphy and cyclostratigraphy in the Mediterranean

    NASA Astrophysics Data System (ADS)

    Krijgsman, W.; Hilgen, F. J.; Langereis, C. G.; Santarelli, A.; Zachariasse, W. J.

    1995-12-01

    A new chronology for the late Miocene of the Mediterranean is presented by combining magnetostratigraphic, biostratigraphic (planktonic foraminifera and dinoflagellates) and cyclo-stratigraphic data. Long and continuous upper Miocene sections on Gavdos (Metochia section) and Sicily (Gibliscemi section) display cyclic alternations of homogeneous marls and sapropels and can be correlated on the basis of their distinct cyclic patterns. The Metochia section yields a good paleomagnetic signal and the position of 17 polarity reversals can be determined. The resulting polarity sequence allows an unambiguous correlation to the geomagnetic polarity time scale (GPTS). The paleomagnetic signal in the Gibliscemi section is too weak to determine a reliable polarity sequence, except for the lowermost part of the section. Detailed biostratigraphic analysis results in the identification of 13 planktonic foraminiferal and 9 dinoflagellate bioevents, which can all be accurately dated. The Tortonian/Messinian boundary, defined by the First Regular Occurrence (FRO) of the G. conomiozea group, is determined in chron C3Br.1r with an age of 7.12 Ma, according to the GPTS (CK95) of Cande and Kent [1].

  7. What controls early Miocene relief production of southeastern Tibet?

    NASA Astrophysics Data System (ADS)

    Cao, Kai

    2016-04-01

    When and how the high-elevation, low-relief relict surface originated in the SE Tibet remain debated. Tectono-geomorphologic analyses reveal that a NE-SW-strike topographic step is extended from the Longmen Shan to Jianchuan Basin, coincident with the trace of the Yalong-Yulong and Jinghe-Qinghe thrust system. This coincidence seems to tell the casual links between the relief generation of SE Tibet and thrusting. We conducted comprehensive work of geological mapping, structural analysis, sedimentology and apatite fission-track dating in the Tertiary Jianchuan Basin. Structural analysis examined a newly-defined thrust-Lijiang fault, viewed as the southeastward extending of the Yalong-Yulong thrust. Apatite fission-track data reveals rapid exhumation of the Jianchuan Basin at ~20-18 Ma in the hanging wall of the Lijiang thrust consistent with regional absence of Early Miocene sediments, indicating Early Miocene uplift of the Jianchuan Basin. We proposed that this event was likely related to the thrusting of the Yulong-Lijiang fault, broadly coeval with EW-oriented compression prevailed along the relief margins of the southeastern Tibet. Therefore, our new data supports that the relief production of the SE Tibet was controlled by thrusting, which predicts a revised block extrusion model.

  8. Plate-induced Miocene extension in southern California

    SciTech Connect

    Stuart, W.D. Univ. of California, Santa Barbara, CA )

    1992-01-01

    Miocene crustal extension in southern California can be explained by the interaction of tectonic plates in relative motion. The Pacific, Juan de Fuca, and Farallon (Guadalupe) plates are represented by flat elastic plates surrounded by an infinite elastic plate, the eastern part of which represents the North America plate. Forcing is by assigned subduction pull, and tractions at all plate boundaries satisfy a viscous constitutive law. Plate bottoms are stress-free. In the first part of the solution plate velocities and boundary tractions are found from static equilibrium. Then principal horizontal stresses and strains in plate interiors caused by tractions and subduction pull are found by a boundary element procedure. Using plate boundary geometry from Stock and Hodges for early- and mid-Miocene times, it is found that the portion of the North America plate margin between the Mendocino and Rivera triple junctions has maximum extensional strain directed westward. This result is generally consistent with directions associated with metamorphic core complex formation in southern California. The model is also consistent with extensional strain and rotation sense of crustal blocks in the vicinity of Los Angeles, as inferred by Luyendyk and others from paleomagnetic data. In the model the greatest extensional strain of the North America plate occurs near the Pacific-North America transform, in the area above the absent Farallon slab. Extension direction varies from northwest to southwest according to plate geometry, subduction pull (Juan de Fuca and Guadalupe), and plate boundary tractions.

  9. Early Miocene sequence development across the New Jersey margin

    USGS Publications Warehouse

    Monteverde, D.H.; Mountain, Gregory S.; Miller, K.G.

    2008-01-01

    Sequence stratigraphy provides an understanding of the interplay between eustasy, sediment supply and accommodation in the sedimentary construction of passive margins. We used this approach to follow the early to middle Miocene growth of the New Jersey margin and analyse the connection between relative changes of sea level and variable sediment supply. Eleven candidate sequence boundaries were traced in high-resolution multi-channel seismic profiles across the inner margin and matched to geophysical log signatures and lithologic changes in ODP Leg 150X onshore coreholes. Chronologies at these drill sites were then used to assign ages to the intervening seismic sequences. We conclude that the regional and global correlation of early Miocene sequences suggests a dominant role of global sea-level change but margin progradation was controlled by localized sediment contribution and that local conditions played a large role in sequence formation and preservation. Lowstand deposits were regionally restricted and their locations point to both single and multiple sediment sources. The distribution of highstand deposits, by contrast, documents redistribution by along shelf currents. We find no evidence that sea level fell below the elevation of the clinoform rollover, and the existence of extensive lowstand deposits seaward of this inflection point indicates efficient cross-shelf sediment transport mechanisms despite the apparent lack of well-developed fluvial drainage. ?? 2008 The Authors. Journal compilation ?? 2008 Blackwell Publishing.

  10. Miocene to Pliocene osmium isotopic records of Mediterranean sediments

    NASA Astrophysics Data System (ADS)

    Kuroda, Junichiro; Jiménez-Espejo, Francisco J.; Nozaki, Tatsuo; Gennari, Rocco; Lugli, Stefano; Manzi, Vinicio; Roveri, Marco; Flecker, Rachel; Suzuki, Katsuhiko; Yoshimura, Toshihiro; Sierro, Francisco; Ohkouchi, Naohiko

    2015-04-01

    In the late Miocene the Mediterranean Sea experienced a salinity crisis and thick sequences of evaporites precipitated across the basin. In this study we report Os isotopic records from drilled cores in the Mediterranean; the Balearic Sea, the Tyrrhenian Sea, the Ionian Basin and the Florence Rise. Pliocene sediments at all sites show 187Os/188Os values close to that of the coeval ocean water, indicating that the Mediterranean was connected to the North Atlantic. Evaporitic sediments deposited during the late Miocene however, have 187Os/188Os values lower than coeval ocean water values and samples from the eastern Mediterranean and Ionian basins are particularly low. Os isotopic ratios of the pre-evaporite sediments in the western Mediterranean are almost identical to that of the coeval ocean water. In contrast, equivalent sediments from the Florence Rise have significantly lower 187Os/188Os values. The offset of Mediterranean evaporite 187Os/188Os is attributed to limited exchange with the North Atlantic during the Messinian Salinity Crisis (MSC). The source of unradiogenic Os is likely to be weathering of ultramafic rocks (ophiolites) cropping out in the Mediterranean's drainage basins. The offset in the Os ratio on the Florence Rise is attributed either to limited water exchange between eastern and western Mediterranean, or to local effects associated with exhumation of ophiolites around the eastern Mediterranean Sea.

  11. The first record of Deinotherium (Proboscidea, Mammalia) in the Miocene of Adygea.

    PubMed

    Tarasenko, K K; Lopatin, A V; Maschenko, E N

    2015-01-01

    The data on an isolated upper tooth (P4) of Deinotherium sp. from the Late Miocene beds of the Maikop 1 locality (Maikop, Republic of Adygea) are reported. This is the first record of Deinotherium from the Upper Miocene of Russia. The tooth crown of P4 is similar in size to D. proavum Eichwald, 1831 (= D. gigantissimum Stefanescu, 1892).

  12. Tropical sea surface temperature variability near the Oligocene - Miocene boundary

    NASA Astrophysics Data System (ADS)

    Zhang, Y.; Pagani, M.

    2010-12-01

    The Oligocene/Miocene (O-M) boundary is characterized by a period of rapid and intense glaciation labeled Mi-1 at ~ 23.1 Ma. An abrupt 1.5‰ increase in the benthic foraminifera oxygen isotope composition that characterizes Mi-1 may indicate a (1) significant deep-water temperature decrease; (2) major ice-sheet expansion, or the combination of both. Current coarse Mg/Ca-based temperature estimations for the early Miocene suggests that deep-ocean temperatures were ~2°C warmer than Today [1, 2]. However, Mg/Ca based temperatures can also be influenced by changes in the carbonate ion concentration, vital effects, and diagenesis. In particular, recent evidence from mid-ocean ridge flank carbonate veins shows dramatic seawater Mg/Ca ratio changes during the Neogene (Mg/Ca from ~2.2 to 5.3, [3]), which further challenges the application of Mg/Ca thermometry. Owing to poor temperature constraints, current ice volume estimations for the late Oligocene/early Miocene range from 125% of the present-day East Antarctic Ice Sheet (EAIS) to a nearly complete collapse of the Antarctic glaciers [4]. Here we present tropical sea surface temperatures (SSTs) records based on TEX86 and alkenone UK37 near the O-M boundary. Sediment samples from Ocean Drilling Program (ODP) Site 926 in the Ceara Rise (tropical Atlantic) and Site 1148 in the South China Sea (tropical Pacific) were subject to lipid extraction, separation, gas chromatography, and liquid chromatography-mass spectrometry analysis. TEX86-based SST indicates that the tropics were ~3-4°C warmer than today and relatively stable during Mi-1. This suggests that ice-sheet dynamics, rather than temperature, might be responsible for the observed oxygen isotope changes during the O-M boundary. Further, O-M boundary averaged temperatures recorded at site 926 is ~ 0.5°C higher relative to the late Eocene from site 925 (a nearby site [5]). Given late Oligocene benthic δ18O that suggests at least 1‰ enrichment relative to the late

  13. A macroecological glance at the structure of late Miocene rodent assemblages from Southwest Europe.

    PubMed

    Gómez Cano, Ana Rosa; Cantalapiedra, Juan L; Álvarez-Sierra, M Ángeles; Hernández Fernández, Manuel

    2014-01-01

    Deep-time perspectives in macroecology are essential with regard to understanding the impact of climate forcing on faunal communities. Using late Miocene rodent faunas (12 to 5 Ma) from two different biogeographical provinces from southwestern Europe, we asked whether the waxing and waning of faunas with dissimilar ecological affinities tracked climate in different ways. The latest middle Miocene featured a fauna dominated by dormice with forest and mixed-habitat affinities. This group declined towards the Upper Miocene. Rodent taxa with the highest values of richness at the beginning of the Upper Miocene are generalists in the southern province and specialists of forested habitats in the northern province. Finally, we identified a third, increasingly significant group of rodents linked to open landscapes towards the end of the Miocene. These three broad ecological groups showed differential responses to a complex set of interconnected circumstances, including the biogeographic structure of the study area and climatic changes throughout time. PMID:25297009

  14. A macroecological glance at the structure of late Miocene rodent assemblages from Southwest Europe

    PubMed Central

    Cano, Ana Rosa Gómez; Cantalapiedra, Juan L.; Álvarez-Sierra, M. Ángeles; Fernández, Manuel Hernández

    2014-01-01

    Deep-time perspectives in macroecology are essential with regard to understanding the impact of climate forcing on faunal communities. Using late Miocene rodent faunas (12 to 5 Ma) from two different biogeographical provinces from southwestern Europe, we asked whether the waxing and waning of faunas with dissimilar ecological affinities tracked climate in different ways. The latest middle Miocene featured a fauna dominated by dormice with forest and mixed-habitat affinities. This group declined towards the Upper Miocene. Rodent taxa with the highest values of richness at the beginning of the Upper Miocene are generalists in the southern province and specialists of forested habitats in the northern province. Finally, we identified a third, increasingly significant group of rodents linked to open landscapes towards the end of the Miocene. These three broad ecological groups showed differential responses to a complex set of interconnected circumstances, including the biogeographic structure of the study area and climatic changes throughout time. PMID:25297009

  15. A macroecological glance at the structure of late Miocene rodent assemblages from Southwest Europe

    NASA Astrophysics Data System (ADS)

    Cano, Ana Rosa Gómez; Cantalapiedra, Juan L.; Álvarez-Sierra, M. Ángeles; Fernández, Manuel Hernández

    2014-10-01

    Deep-time perspectives in macroecology are essential with regard to understanding the impact of climate forcing on faunal communities. Using late Miocene rodent faunas (12 to 5 Ma) from two different biogeographical provinces from southwestern Europe, we asked whether the waxing and waning of faunas with dissimilar ecological affinities tracked climate in different ways. The latest middle Miocene featured a fauna dominated by dormice with forest and mixed-habitat affinities. This group declined towards the Upper Miocene. Rodent taxa with the highest values of richness at the beginning of the Upper Miocene are generalists in the southern province and specialists of forested habitats in the northern province. Finally, we identified a third, increasingly significant group of rodents linked to open landscapes towards the end of the Miocene. These three broad ecological groups showed differential responses to a complex set of interconnected circumstances, including the biogeographic structure of the study area and climatic changes throughout time.

  16. Early innate immune response of immune proteins in juvenile channel catfish Ictalurus punctatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel catfish (Ictalurus punctatus) are raised for aquaculture in the Southeast U.S. and are susceptible to bacterial and viral infections acquired from their pond environment. Innate immune proteins mannose-binding lectin (MBL) and lysozyme were studied during two consecutive years in channel cat...

  17. Effect of channel catfish stocking rate on yield and water quality in an intensive production system

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The effect of stocking rate on production of NWAC 103 strain channel catfish (Ictalurus punctatus) and water quality was investigated using a completely randomized design in an intensively managed biofloc raceway system. Each of the 9 HDPE-lined raceways (4.6 m x 9.2 m with a 0.9-m water depth; 42.2...

  18. Expression profiles of seven channel catfish antimicrobial peptides in response to Edwardsiella ictaluri infection

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Using quantitative PCR technique, the relative transcriptional levels of seven channel catfish antimicrobial peptide (AMP) genes [NK-lysin type 1, NK-lysin type 2, NK-lysin type 3, bactericidal permeability-increasing protein (BPI), cathepsin D, hepcidin, and liver-expressed antimicrobial peptide 2 ...

  19. Channel catfish (Ictalurus punctatus) CD156a mRNA sequence

    Technology Transfer Automated Retrieval System (TEKTRAN)

    CD156a, also known as A Disintegrin And Metalloproteinase domain 8 (ADAM8), is a member of ADAM family. We cloned, and sequenced the channel catfish CD156a transcript. The full-length of the CD156a cDNA consisted of 3035 nucleotides, including a 5’-untranslated region (UTR), an open reading frame ...

  20. Complete genome sequence of Edwardsiella tarda (isolate FL95-01)recovered from channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Edwardsiella tarda is a Gram-negative facultative anaerobe isolated from fish, reptiles, amphibians, and mammals, including humans. This is a report of the complete and annotated genome of E. tarda isolate FL95-01, recovered from channel catfish (Ictalurus punctatus)....

  1. Economic feasibility of an in-pond raceway system for commercial catfish production in west Alabama

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The endeavor of this project was to improve profitability of catfish farming by demonstrating methods to achieve high levels of survival, feed performance, and efficiency in a commercial farm setting. A commercial-scale, in-pond raceway system was constructed in 2007 in a 6.0 ac earthen pond on a ca...

  2. Design and fish culture considerations for catfish farming in split ponds

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Split ponds are simple, pond-based aquaculture systems constructed by dividing an existing catfish pond into two unequal basins with an earthen levee. Fish are confined in the smaller basin (usually about 15-20% of total water area) while the larger basin serves as a waste-treatment lagoon. A high-v...

  3. DEET (N,N-diethyl-m-toluamide) toxicity to channel catfish Ictalurus punctatus sac fry

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The combination of open facilities, moisture, and warm weather during channel catfish Ictalurus punctatus spawning season causes mosquito-infestation problems. A common solution to mosquito problems in hatcheries is to use mosquito repellents applied to exposed skin and clothing. DEET (N,N-diethyl-...

  4. Molecular Cloning and Sequencing of Channel Catfish, Ictalurus punctatus, Cathepsin H and L cDNA

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cathepsin H and L, a lysosomal cysteine endopeptidase of the papain family, are ubiquitously expressed and involve in antigen processing. In this communication, the channel catfish cathepsin H and L transcripts were sequenced and analyzed. Total RNA from tissues was extracted and cDNA libraries we...

  5. Oxygen and nitrogen dyamics in split ponds vs. intensive and conventional catfish production ponds

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The Split Pond aquaculture system (SP) has captured the attention of catfish producers across the southern U.S. The SP represents a lower cost adaptation of Clemson University’s Partitioned Aquaculture System (PAS). The original PAS design relied on slowly rotating paddlewheels to move water throu...

  6. Dioxins and other environmental contaminants in catfish from U.S. commerce

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The Food, Conservation, and Energy Act of 2008 (Farm Bill), amended the Federal Meat Inspection Act to provide that "catfish, as defined by the Secretary," is an amenable species and therefore subject to continuous inspection by the USDA Food Safety Inspection Service. Since few background data are ...

  7. Effect of chronic, nightly hypoxia on growth and yield of channel x blue hybrid catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Performance traits and metabolic responses of the channel x blue hybrid catfish (Ictalurus punctatus female, Jubilee strain x I. furcatus male, D&B strain) in response to chronic nightly hypoxia were evaluated in this 197-d study. Sixteen 0.25-acre earthen ponds were stocked with 6,141 hybrid catfis...

  8. Toxicity of organophosphorus pesticide sumithion on larval stages of stinging catfish Heteropneustes fossilis

    NASA Astrophysics Data System (ADS)

    Shahjahan, Md.; Kabir, Md. Farajul; Sumon, Kizar Ahmed; Bhowmik, Lipi Rani; Rashid, Harunur

    2016-04-01

    Sumithion is widely used to control brittle in paddy fields and tiger bug in fish larval rearing ponds. The objective of this study was to elucidate the toxic effects of sumithion on larval stages of stinging catfish Heteropneustes fossilis. Larvae were exposed to two concentrations (150 and 250 μg/L) of sumithion with one control in three replicates of each. Larvae samples were collected at 20- and 24-h intervals followed by observation under a digital microscope. Exposures of stinging catfish larvae to sumithion produced deformities including irregular head shape, lordosis, yolk sac edema, body arcuation, tissue ulceration, etc. The mortality rates of larvae were significantly increased in response to increase in sumithion concentrations. Furthermore, around 30% of the total adult stinging catfish reared in sumithiontreated aquaculture ponds were found to be deformed permanently. These findings highlight that exposure of stinging catfish to sumithion at the critical and sensitive stages in their life cycle may significantly reduce the number of returning adults. Therefore, the use of sumithion for crop protection needs to be considered carefully and alternatives to sumithion should to be developed for controlling aquatic insects in aqua-ponds during larval rearing.

  9. Efficacy of Sodium Carbonate Peroxyhydrate as A Catfish Egg Disinfectant and Comparison to Hydrogen Peroxide

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Two experiments were conducted to evaluate the efficacy of sodium carbonate peroxyhydrate (SCP) for improving channel catfish Ictalurus punctatus hatching success when used as a prophylactic chemotherapeutant during egg incubation. In the first experiment, efficacy of SCP was evaluated in 379-L, al...

  10. SEASONAL FORAGING BY CHANNEL CATFISH ON TERRESTRIALLY BURROWING CRAYFISH IN A FLOODPLAIN-RIVER ECOSYSTEM

    EPA Science Inventory

    The seasonal use of terrestrially burrowing crayfish as a food item by channel catfish Ictalurus punctatus was studied in channelized and non-channelized sections of the Yockanookany River (Mississippi, USA). During seasonal inundation of the floodplains, the crayfish occupied o...

  11. Antibiotic Resistance in Listeria Species Isolated from Catfish Fillets and Processing Environment

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The susceptibility of 221 Listeria spp. (86 Listeria monocytogenes, 41 Listeria innocua and 94 Listeria seeligeri-Listeria welshimeri-Listeria ivanovii) isolated from catfish fillets and processing environment to 15 antibiotics was determined. Listeria isolates were analysed by disc-diffusion assay...

  12. Characterization of additional novel immune type receptors in channel catfish, Ictalurus punctatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Mining of channel catfish (Ictalurus punctatus) expressed sequence tag databases identified seven new novel immune type receptors (IpNITRs). These differed in sequence, but not structure, from previously described IpNITR1-11. IpNITR12a, 12b, 13 and 14, encode proteins containing a single variable (V...

  13. Pre and postprandial changes in orexigenic and anorexigenic factors in channel catfish Ictalurus punctatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We examined pre- and postprandial changes in the expression of plasma ghrelin (GHRL) and mRNAs encoding GRLN, cocaine and amphetamine regulated transcript (CART), neuropeptide Y (NPY), and cholecystokinin (CCK) in channel catfish. Fish were either offered feed (Fed) or fasted (Unfed). Feeding incr...

  14. Effect of graded fingerlings on hybrid catfish food fish size distribution

    Technology Transfer Automated Retrieval System (TEKTRAN)

    It is not unusual to have both 0.5 lb and 5 lb fish harvested from a single-batch hybrid catfish production pond at the end of the growing season. When that happens, farmers may be docked for fish that are either larger or smaller than the processor’s preferred size range. This study was conducted t...

  15. Impact of Copper Sulfate on Plankton in Channel Catfish Nursery Ponds

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Many fish culturists are interested in applying copper sulfate pentahydrate (CSP) to channel catfish, Ictalurus punctatus, nursery ponds as a prophylactic treatment for trematode infection and proliferative gill disease by killing snails and Dero sp., respectively, before stocking fry. However, copp...

  16. Channel catfish, Ictalurus punctatus, chemokine receptor CXCR4 cDNA

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Chemokine receptor CXCR4, a member of the G protein-coupled receptor superfamily, binds selectively CXCL12. This protein plays many important roles in immunological as well as pathophysiological functions. In this communication, we identified and characterized the channel catfish CXCR4 transcript....

  17. Critical thermal maxima of two geographic strains of channel and hybrid catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Critical thermal maxima have been used extensively to provide physiologically and ecologically valuable reference points that identify early signs of thermal stress. In catfish pond culture, daily temperature maxima up to 36'C and daily fluctuations of as much as 6'Care observed. These extreme condi...

  18. Identification and mucosal expression analysis of cathepsin B in channel catfish (Ictalurus punctatus) following bacterial challenge.

    PubMed

    Li, Chao; Song, Lin; Tan, Fenghua; Su, Baofeng; Zhang, Dongdong; Zhao, Honggang; Peatman, Eric

    2015-12-01

    The mucosal surfaces of fish (skin, gill and intestine) constitute the primary line of defense against pathogen invasion. Although the importance of fish mucosal surfaces as the first barriers against pathogens cannot be overstated, the knowledge of teleost mucosal immunity are still limited. Cathepsin B, a lysosomal cysteine protease, is involved in multiple levels of physiological and biological processes, and playing crucial roles for host immune defense against pathogen infection. In this regard, we identified the cathepsin B (ctsba) of channel catfish and investigated the expression patterns of the ctsba in mucosal tissues following Edwardsiella ictaluri and Flavobacterium columnare challenge. Here, catfish ctsba gene was widely expressed in all examined tissues with the lowest expression level in muscle, and the highest expression level in trunk kidney, followed by spleen, gill, head kidney, intestine, liver and skin. In addition, the phylogenetic analysis showed the catfish ctsba had the strongest relationship to zebrafish. Moreover, the ctsba showed a general trend of up-regulated in mucosal tissues following both Gram-negative bacterial challenge. Taken together, the increased expression of ctsba in mucosal surfaces indicated the protective function of ctsba against bacterial infection, and the requirement for effective clearance of invading bacteria. Further studies are needed, indeed, to expand functional characterization and examine whether ctsba may play additional physiological and biological roles in catfish mucosal tissues. PMID:26497091

  19. A Vertical-Lift Incubator (The "Seesaw") Designed for Channel Catfish Egg Masses

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Catfish spawns have been incubated the same way for nearly a century. Spawns are placed in baskets and agitated with rotating paddles. While this system is widely used, it has been recently determined that dissolved oxygen in the center of a spawn may be as much as 5 ppm less than air-saturated wate...

  20. Comparison of phytoplankton communities in catfish split-pond aquaculture systems with conventional ponds.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    There has been a growing interest and use of variations of partitioned aquaculture systems (PAS) in recent years by the southeastern United States of America farmed catfish industry. Split-pond systems, one type of PAS, are designed to better manage fish waste byproducts (e.g., ammonia) and dissolv...

  1. The channel catfish genome sequenc provides insights into the evolution of scale formation in teleosts

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel catfish (Ictalurus punctatus), characteristic of its scaleless skin and prominent barbels, is an ideal species to study osteogenesis, development of appendages, olfactory sensing, and immunological adaptation. It is the leading aquaculture species in the United States. A high quality refere...

  2. Identification of SHIP-1 and SHIP-2 homologs in channel catfish, Ictalurus punctatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Src homology domain 2 (SH2) domain-containing inositol 5’-phosphatases (SHIP) proteins have diverse roles in signal transduction. SHIP-1 and SHIP-2 homologs were identified in channel catfish, Ictalurus punctatus, based on sequence homology to murine and human SHIP sequences. Full-length cDNAs for ...

  3. Impact of weather on off-flavor episodes at a Louisiana commercial catfish farm.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The catfish aquaculture industry is hampered by off-flavor events that affect timely sale and pond restocking. In this study, weather data was correlated with geosmin and 2-methylisoborneol levels in 21 commercial ponds. Samples were collected weekly for 44 weeks. The off-flavor compounds, geosmi...

  4. Effects of dietary copper supplements on the resistance of channel catfish to columnaris disease

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Copper is an essential dietary component in animal feeds. Copper sulfate has also been shown to be therapeutic and prophylactic as a water treatment for several indications including columnaris disease. Columnaris disease is one of the most important bacterial diseases of channel catfish commercial...

  5. Dietary copper effects survival of channel catfish challenged with Flavobacterium columnare

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Columnaris disease is one of the most important bacterial diseases of channel catfish, Ictalurus punctatus, commercially grown in the US. Copper sulfate (CuSO4) has also been shown to be both therapeutic and prophylactic as a water treatment for columnaris disease. As copper is an essential dietar...

  6. Effects of co-stocking smallmouth buffalo, Ictiobus bubalus, with channel catfish, Ictalurus punctatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Proliferative gill disease (PGD) in catfish is caused by the myxozoan Henneguya ictaluri. The complex life cycle requires Dero digitata as the oligochaete host. Efforts to control PGD by eradicating D. digitata have been unsuccessful. Smallmouth buffalo, Ictiobus bubalus, (SMB) are opportunistic bot...

  7. IncA/C Plasmid-Mediated Florfenicol Resistance in the Catfish Pathogen Edwardsiella ictaluri

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Florfenicol has recently been approved for the treatment of enteric septicemia of catfish caused by Edwardsiella ictaluri. Here we report the identification of florfenicol resistance in a clinical isolate of E. ictaluri. Resistance in this isolate is associated with a mobile IncA/C plasmid conferrin...

  8. A Genome-Wide Association Study Identifies Multiple Regions Associated with Head Size in Catfish

    PubMed Central

    Geng, Xin; Liu, Shikai; Yao, Jun; Bao, Lisui; Zhang, Jiaren; Li, Chao; Wang, Ruijia; Sha, Jin; Zeng, Peng; Zhi, Degui; Liu, Zhanjiang

    2016-01-01

    Skull morphology is fundamental to evolution and the biological adaptation of species to their environments. With aquaculture fish species, head size is also important for economic reasons because it has a direct impact on fillet yield. However, little is known about the underlying genetic basis of head size. Catfish is the primary aquaculture species in the United States. In this study, we performed a genome-wide association study using the catfish 250K SNP array with backcross hybrid catfish to map the QTL for head size (head length, head width, and head depth). One significantly associated region on linkage group (LG) 7 was identified for head length. In addition, LGs 7, 9, and 16 contain suggestively associated regions for head length. For head width, significantly associated regions were found on LG9, and additional suggestively associated regions were identified on LGs 5 and 7. No region was found associated with head depth. Head size genetic loci were mapped in catfish to genomic regions with candidate genes involved in bone development. Comparative analysis indicated that homologs of several candidate genes are also involved in skull morphology in various other species ranging from amphibian to mammalian species, suggesting possible evolutionary conservation of those genes in the control of skull morphologies. PMID:27558670

  9. Effects of condtioning channel catfish Ictalurus punctatus to acute low water stress

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Physiological stress and injury are the primary reasons for increased outbreak of diseases in catfish. Since stress cannot be eliminated from culture practices entirely, researchers are investigating ways to decrease the stress response in order to increase survival to diseases. Booth and Peterson (...

  10. Immunization with recombinant aerolysin and hemolysin protected channel catfish against virulent Aeromonas hydrophila

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Aeromonas hydrophila is emerging as one of the major concerns in catfish aquaculture in the Southeastern United States due to recent outbreaks of motile aeromonad septicemia (MAS) caused by virulent clonal isolates. There is no effective vaccine currently available for the prevention of MAS. In this...

  11. Complement regulatory protein genes in channel catfish and their involvement in disease defense response.

    PubMed

    Jiang, Chen; Zhang, Jiaren; Yao, Jun; Liu, Shikai; Li, Yun; Song, Lin; Li, Chao; Wang, Xiaozhu; Liu, Zhanjiang

    2015-11-01

    Complement system is one of the most important defense systems of innate immunity, which plays a crucial role in disease defense responses in channel catfish. However, inappropriate and excessive complement activation could lead to potential damage to the host cells. Therefore the complement system is controlled by a set of complement regulatory proteins to allow normal defensive functions, but prevent hazardous complement activation to host tissues. In this study, we identified nine complement regulatory protein genes from the channel catfish genome. Phylogenetic and syntenic analyses were conducted to determine their orthology relationships, supporting their correct annotation and potential functional inferences. The expression profiles of the complement regulatory protein genes were determined in channel catfish healthy tissues and after infection with the two main bacterial pathogens, Edwardsiella ictaluri and Flavobacterium columnare. The vast majority of complement regulatory protein genes were significantly regulated after bacterial infections, but interestingly were generally up-regulated after E. ictaluri infection while mostly down-regulated after F. columnare infection, suggesting a pathogen-specific pattern of regulation. Collectively, these findings suggested that complement regulatory protein genes may play complex roles in the host immune responses to bacterial pathogens in channel catfish.

  12. Developing a low cortisol responsive line of channel catfish, Ictalurus punctatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Nagaraj G. Chatakondi and Brian C. Peterson USDA ARS Warmwater Aquaculture Research Unit, 141 Experiment Station Road, Stoneville, MS 38776. nagaraj.chatakondi@ars.usda.gov Channel catfish, Ictalurus punctatus is the most important farm-raised aquacultured species in the USA. Stressors in aquacultu...

  13. Plasma cortisol stress response in channel catfish, Ictalurus punctatus influences susceptibility to Edwardeseilla ictaluri

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cortisol is a primary stress hormone in fish as its plasma variations correlate with the occurrence of various stressful situations. Past studies have demonstrated that fish subjected to handling stress or poor water quality had a reduced ability to resist pathogens. Channel catfish fingerlings th...

  14. Acute toxicity and histopathology of channel catfish fry exposed to peracetic acid

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel catfish Ictalurus punctatus yolk-sac fry and swim-up fry were exposed to peracetic acid (PAA) for 48h in static toxicity bioassays at 23C. The test water was 217 and 126 mg/L (as CaCO3) total alkalinity and total hardness, respectively. Probit LC50 values were estimated with the trimmed Sp...

  15. New Data on Henneguya Pellis (Myxozoa: Myxobolidae), A Parasite of Blue Catfish Ictalurus furcatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The original description of Henneguya pellis, a myxozoan parasitizing blue catfish Ictalurus furcatus, is supplemented with new data on histopathology, spore morphology, and 18S small subunit (SSU) ribosomal DNA (rDNA) sequence. Plasmodia presented as both internal and external, raised, cyst-like le...

  16. New Data on Henneguya pellis (Myxozoa: Myxobolidae), A Parasite of Blue Catfish Ictalurus furcatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The original description of Henneguya pellis, a myxozoan parasitizing blue catfish Ictalurus furcatus, is supplemented with new data on histopathology, spore morphology, and 18S small-subunit (SSU) ribosomal DNA (rDNA) sequence. Plasmodia presented as both internal and external, raised, cyst-like le...

  17. Single intravenous and oral dose pharmacokinetics of florfenicol in the channel catfish Ictalurus punctatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Plasma distribution and elimination of florfenicol in channel catfish were investigated after a single dose (10mg/kg) of intravenous i.v.) or oral administration in freshwater at a mean water temperature of 25.4°C. Florfenicol concentrations in plasma were analyzed by means of liquid chromatography...

  18. Streptococcal Arthritis, Osteolysis, Myositis, and Spinal Meningitis in Channel Catfish Ictalurus punctatus Broodstock

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This report details findings of an investigation into complaints by commercial fingerling producers of low-grade mortalities, poor reproductive success, emaciation, skin lesions, and severely arched backs among broodstock of channel catfish Ictalurus punctatus. Gross lesions involved the jaw, fin ba...

  19. Susceptibility of three strains of blue catfish to parasite Ichthyophthirius multifiliis

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This study compared the susceptibility of 3 blue catfish (Ictalurus furcatus) strains (D&B, USDA 101 and USDA 102) to the parasite Ichthyopthirius multifiliis (Ich). In Trial I, a cohabitation study (all strains stocked communally) was conducted and fish were exposed to theronts at 0, 200, 1000, 5,...

  20. Dissolved Oxygen management in catfish ponds using electric paddlewheel aerators: new approaches with old technology

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The electric paddlewheel aerator has been the main aerator used in the U.S. catfish industry for the post forty years. While it has its limitations, it is perhaps the most efficient shallow-water aerator yet to be developed. Its shortcomings result not so much from poor design, as from poor usage. U...

  1. Improving water-use efficiency for ictalurid catfish pond aquaculture in Northwest Mississippi, USA

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We used a 50-year (1961-2010) daily record of precipitation and evaporation in a hydrological model to simulate ground water withdrawal for the foodfish grow-out phase of ictalurid catfish culture in northwest Mississippi, USA. The model examined the effects of seepage, reusing water for multiple y...

  2. Determination of the median lethal dose of botulinum serotype E in channel catfish fingerlings

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The median lethal dose of botulinum serotype E in 5.3-g channel catfish Ictalurus punctatus fingerlings was determined. Five tanks (five fish/tank) were assigned to each of the following treatment groups: 70, 50, 35, 25, or 15 pg of purified botulinum serotype E. Fish were injected intracoelomically...

  3. Winter performance of an outdoor biofloc production system for channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In the tropics, outdoor biofloc technology production systems are operated year-round. While channel catfish (Ictalurus punctatus) have been grown successfully in an outdoor biofloc production system, these studies were conducted only during the growing season and production tanks were idled for the...

  4. Comments to Middle Miocene closure of the Central American Seaway

    USGS Publications Warehouse

    Coates, A.G.; Stallard, Robert F.

    2016-01-01

    In a recent paper proposing an early (mid-Miocene) closure of the Central American Seaway (CAS), Montes et al. 2015 (1) disregard existing paleogeographic data that invalidate Panama as a source for zircons, and inappropriately ignore the evidence for trans-isthmian marine connections until 4-3 Ma. They also fail to cite previous work (2, 3), that had reconstructed the Central American arc already docked with South America by 12 Ma. Montes et al. 2015 (1) (Fig. 1) disregard the Atrato-San Juan sedimentary basin (3), a shallowing Oligocene to Pliocene, Pacific to Caribbean seaway (3, 4, 5). This deep graben (6) is filled with thousands of meters of Pre-Pliocene marine sediments (3, 5, 6) that now occupy a lowland between the Baudo uplift to the west and the Western Cordillera to the east. The Mande Batholith and numerous Eocene and younger volcanic rocks (4), the most proximal source of the zircons, are situated to the east of this seaway and would have shed zircons eastward towards the Cordillera Central. There is no evidence for any rivers crossing the seaway (3, 5), and thus no Panamanian source of zircons. Instead this seaway is evidence of a significant marine connection between the Pacific and Atlantic oceans into the Pliocene. The authors assume that the middle Miocene closure of the CAS effectively creates a continuous land bridge connecting North and South America and separating the Atlantic from the Pacific. They acknowledge, but then discount, marine connections across the Isthmus until 4-3 Ma even though these satisfactorily explain (Coates and Stallard, 2014 (6)) the oceanographic, molecular and Great American Biological Interchange events ignore unexplained by Montes et al. 2015. Only by conspicuously ignoring these events can they imply that the Isthmus was formed at 15-13 Ma. References 1. C. Montes et al., Middle Miocene closure of the Central American Seaway. Science 348, 226-229 (2015). 2. A. G. Coates, R. F. Stallard, How old is the Isthmus of

  5. Porosity evolution of upper Miocene reefs, Almeria Province, southern Spain

    USGS Publications Warehouse

    Armstrong, A.K.; Snavely, P.D.; Addicott, W.O.

    1980-01-01

    Sea cliffs 40 km east of Almeria, southeastern Spain, expose upper Miocene reefs and patch reefs of the Plomo formation. These reefs are formed of scleractinian corals, calcareous algae, and mollusks. The reef cores are as much as 65 m thick and several hundred meters wide. Fore-reef talus beds extend 1,300 m across and are 40 m thick. The reefs and reef breccias are composed of calcific dolomite. They lie on volcanic rocks that have a K-Ar date of 11.5 m.y. and in turn are overlain by the upper Miocene Vicar Formation. In the reef cores and fore-reef breccia beds, porosity is both primary and postdepositional. Primary porosity is of three types: (a) boring clam holes in the scleractinian coral heads, cemented reef rocks, and breccias; (b) intraparticle porosity within the corals, Halimeda plates, and vermetid worm tubes; and (c) interparticle porosity between bioclastic fragments and in the reef breccia. Postdepositional moldic porosity was formed by the solution of aragonitic material such as molluscan and coral fragments. The Plomo reef carbonate rocks have high porosity and permeability, and retain a great amount of depositional porosity. Pores range in size from a few micrometers to 30 cm. The extensive intercrystalline porosity and high permeability resulted from dolomitization of micritic matrix. Dolomite rhombs are between 10 and 30 μ across. More moldic porosity was formed by the dissolution of the calclte bioclasts. Some porosity reduction has occurred by incomplete and partial sparry calcite infilling of interparticular, moldic, and intercrystalline voids. The high porosity and permeability of these reefs make them important targets for petroleum exploration in the western Mediterranean off southern Spain. In these offshore areas in the subsurface the volcanic ridge and the Plomo reef complex are locally onlapped or overlapped by 350 m or more of Miocene(?) and Pliocene fine-grained sedimentary rocks. The possibility exists that the buried Plomo reef

  6. Understanding the Miocene-Pliocene - The Mediterranean Point of View

    NASA Astrophysics Data System (ADS)

    Simon, D.; Marzocchi, A.; Lunt, D. J.; Flecker, R.; Hilgen, F. J.; Meijer, P. T.

    2015-12-01

    During the Miocene-Pliocene the Mediterranean region experienced major changes in paleogeography. Today, its only connection to the global ocean is the Strait of Gibraltar. This restricted nature causes the Mediterranean basin to react more sensitive to climatic and tectonic related phenomena than the global ocean: Not just eustatic sea-level and regional river run-off, but also gateway tectonics and connectivity between sub-basins are leaving an enhanced fingerprint in its geological record. To understand its evolution, it is crucial to understand how these different effects are coupled. The Miocene-Pliocene sedimentary record of the Mediterranean alternates in composition and colour. Around the Miocene-Pliocene Boundary the most extreme changes occur in the Mediterranean Sea: About 6% of the salt in the global ocean got deposited in the Mediterranean Region, forming an approximately 2km thick salt layer, which is still present today. This extreme event is named the Messinian Salinity Crisis (MSC, 5.97-5.33Ma). Before (and also after) the MSC, the sedimentary record demonstrates "marl dominated" alternations with variations in organic content (e.g. higher organic content = sapropel). During the MSC these change to mainly "evaporite (e.g. gypsum or halite) dominated" alternations, but also to brackish Black Sea-type of deposits towards the end of the crisis. Due to its relative short geological time span, the period before, during and after the MSC is ideal to study these extreme changes in sedimentation. We are investigating these couplings and evolutions in a box/budget model. With such a model we can study the responses to basin water exchange dynamics under the effect of different regional and global climatic and tectonic forcings, to predict the evolution of basin properties (e.g. salinity). By doing so we can isolate certain climatic and tectonic effects, to better understand their individual contribution, their interaction, but also the consequences due to

  7. Validation of daily ring deposition in the otoliths of age-0 channel catfish

    USGS Publications Warehouse

    Sakaris, P.C.; Irwin, E.R.

    2008-01-01

    We developed and validated methods for estimating the daily age of age-0 channel catfish Ictalurus punctatus. Two clutches of channel catfish eggs were hatched in the laboratory; subsequently, one was stocked in a 186-m2 earthen nursery pond and the other in a 757-L outdoor circular tank. Before stocking, subsamples of fish were collected at swim-up and 3 d after swim-up to evaluate early ring formation. Fish were sampled from the pond and tank on eight occasions ranging from 30 to 119 d posthatch. Distinct differences in early ring formation were found between yolk sac and free-swimming larval stages. Mean ring count and known age were closely related for tank- and pond-raised fish, indicating that daily ring deposition occurred in the otoliths of age-0 channel catfish up to 119 d posthatch. The accuracy of daily age estimation was similar between tank and pond samples, and daily ring counts were considerably accurate up to 60 d posthatch. Pond-raised fish were more difficult to age than tank-raised fish, which we attributed to ring compression resulting from slower growth among pond-raised fish after 30 d. The total length of tank- and pond-raised fish was positively related to otolith size; however, the slopes of the relationships between fish length and otolith radius were different between treatments. Therefore, we could not confirm that the relationship between fish length and otolith size was directly proportional for age-0 channel catfish. We encourage researchers to use this aging technique to determine how abiotic and biotic factors influence early life history characteristics and ultimately the population dynamics of catfishes (Ictaluridae). ?? Copyright by the American Fisheries Society 2008.

  8. Comparison of native and introduced flathead catfish populations in Alabama and Georgia: Growth, mortality, and management

    USGS Publications Warehouse

    Sakaris, P.C.; Irwin, E.R.; Jolley, J.C.; Harrison, D.

    2006-01-01

    We compared growth of flathead catfish Pylodictis olivaris from two native populations in Alabama (Coosa and Tallapoosa rivers) and two introduced populations in Georgia (Ocmulgee and Satilla rivers). We also compared mortality rates and potential outcomes of various management regimes (minimum length limits [MLLs]) among the populations. Total length-log10(age) regression slopes for introduced fish were higher than those for native fish, and von Bertalanffy growth coefficients (K) were greater for introduced fish (Ocmulgee: 0.195; Satilla: 0.201) than for native individuals (Coosa: 0.057; Tallapoosa: 0.059). Therefore, introduced flathead catfish grew more rapidly than those in their native range. Mortality (instantaneous mortality rate, Z) was higher in the Satilla River population (Z = -0.602) than in the Ocmulgee River (Z = -0.227) and Coosa River (Z = -0.156) populations. However, fish in the Satilla River population had been introduced for only 10 years and presumably did not reach their theoretical maximum age, potentially biasing the mortality estimate for that population. Simulation of management regimes in Fishery Analyses and Simulation Tools software predicted that maximum biomass of flathead catfish in the Ocmulgee (1,668 kg) and Satilla (1,137 kg) rivers was substantially larger than that in the Coosa (873 kg) and Tallapoosa (768 kg) populations. However, increased exploitation rates in the Ocmulgee and Satilla River populations resulted in dramatic declines in overall biomass, especially at lower MLLs (254 and 356 mm, respectively). Therefore, in systems where introduced flathead catfish represent an important recreational fishery but have dramatically reduced the abundance of native fishes through predation, minimal protection is recommended. We contend that rapid growth of introduced flathead catfish has major implications for their management and the conservation of native fishes. ?? Copyright by the American Fisheries Society 2006.

  9. Peripheral Hearing Structures in Fishes: Diversity and Sensitivity of Catfishes and Cichlids.

    PubMed

    Ladich, Friedrich

    2016-01-01

    Fishes have evolved an astonishing diversity of peripheral (accessory/ancillary) auditory structures to improve hearing based on their ability to transmit oscillations of gas bladder walls to the inner ears. So far it is unclear to what degree the size of the bladder and the linkage to the ear affect hearing in fishes. An interfamilial study in catfishes revealed that families which possess large, single swim bladders and one to four Weberian ossicles were more sensitive at higher frequencies (≥1 kHz) than families which have small, paired, and encapsulated bladders and one to two ossicles. An intrafamilial investigation in thorny catfishes (family Doradidae) revealed that small differences in bladder morphology did not affect hearing similarly. Members of the cichlid family possess an even larger variation in peripheral auditory structures than catfishes. The linkage between the swim bladder and ear can either be present via anterior extensions of the bladder or be completely absent (in contrast to catfishes). Representatives having large bladders with extensions had the best sensitivities. Cichlids lacking extensions had lower sensitivities above 0.3 kHz. Species with a vestigial swim bladder exhibited a smaller hearing bandwidth than those with larger swim bladder (maximum frequency: 0.7 kHz vs. 3 kHz). Catfishes and cichlids reveal that larger gas bladders and more pronounced connections between the swim bladder and the inner ear result in improved hearing at higher frequencies. The lack of a connection between a large bladder and the inner ear does not necessarily result in a smaller detectable frequency range. PMID:26515321

  10. Identification and Re-Evaluation of Freshwater Catfishes through DNA Barcoding

    PubMed Central

    Bhattacharjee, Maloyjo J.; Laskar, Boni A.; Dhar, Bishal; Ghosh, Sankar K.

    2012-01-01

    Background Catfishes are globally demanded as human food, angling sport and aquariums keeping thus are highly exploited all over the world. North-East India possess high abundance of catfishes and are equally exploited through decades. The strategies for conservation necessitate understanding the actual species composition, which is hampered due to sporadic descriptions of the species through traditional taxonomy. Therefore, actual catfish diversity in this region is important to be studied through the combined approach of morphological and molecular technique of DNA barcoding. Methodology/Principal Findings Altogether 75 native catfish specimens were collected from across the North-East India and their morphological features were compared with the taxonomic keys. The detailed taxonomic study identified 25 species belonging to 17 genera and 9 families. The cytochrome oxidase c subunit-I gene fragment were then sequenced from the samples in accordance with the standard DNA barcoding protocols. The sequences were compared with public databases, viz., GenBank and BOLD. Sequences developed in the current study and from databases of the same and related taxa were analyzed to calculate the congeneric and conspecific genetic divergences using Kimura 2-parameter distance model, and a Neighbor Joining tree was created using software MEGA5.1. The DNA barcoding approach delineated 21 distinct species showing 4.33 folds of difference between the nearest congeners. Four species, viz., Amblyceps apangi, Glyptothorax telchitta, G. trilineatus and Erethistes pusillus, showed high conspecific divergence; hence their identification through molecular approach remained inconclusive. On the other hand, the database sequences for three species, viz., Mystus horai, Bagarius yarrelli and Clarias batrachus, appeared mislabeled. Conclusion The efficiency of DNA barcoding was reaffirmed from its success by easily identifying the major share (84%) of the studied catfish into 21 distinct

  11. INDUCTION OF NITRIC OXIDE SYNTHASE AND ASSOCIATED TOXICITY IN LIVERS OF HARDHEAD CATFISH, ARIUS FELIS, FROM CONTROL AND EPIZOOTIC SITES

    EPA Science Inventory

    Earlier work with a live channel catfish (Ictalurus punctatus) pathogen, Edwardsiella ictaluri, demonstrated the induction of nitric oxide synthase (NOS) in the head kidney, paralleling enteric septicemia (Hawke et al. 1981; Schoor and Plumb 1994). However, another study exposing...

  12. A reconnaissance study of halogenated organic compounds in catfish from the lower Mississippi river and its major tributaries

    USGS Publications Warehouse

    Leiker, T.J.; Rostad, C.E.; Barnes, C.R.; Pereira, W.E.

    1991-01-01

    Blue catfish, (Ictarurus furcatus), black bullhead catfish, (Ictalurus melas), channel catfish (Ictalurus punctatus), and flathead catfish (Pylodictus olivaris), were collected along a 1200 mile river reach of the Mississippi River and its major tributaries. Tissue samples were extracted and analyzed by fused silica capillary gas chromatography/mass spectrometry (GC/MS) to determine the concentrations of hydrophobic organic halogenated contaminants that have bioconcentrated within the tissues. The compounds identified in the tissue include chlordane, polychlorinated biphenyls (PCBs), DDT and its metabolites along with several other chlorinated pesticides. The data indicates that the southern reach of the river system appears to be more contaminated than the middle and upper reaches of the study area.

  13. Raceway production of large channel catfish fingerlings and winter round tank culture of rainbow trout using heated water

    SciTech Connect

    Not Available

    1984-08-01

    This document contains two reports which summarize research done on using power plant effluent water to raise fish. Two species were studied, catfish and rainbow trout. Separate analytics were done for each report.

  14. Evaluation of a cohabitation challenge model in immunization trials for channel catfish, Ictalurus punctatus (Rafinesque), against Ichthyophthirius multifiliis

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Calcein marking and cohabitation challenge have not been investigated in fish parasite research. This study evaluated a cohabitation challenge method in immunization trials against Ichthyophthirius multifiliis (Ich) using calcein, a fluorescent dye, to mark channel catfish Ictalurus punctatus (Rafi...

  15. Dietary and seasonal effects on the dorsal meat lipid composition of Japanese (Silurus asotus) and Thai catfish (Clarias macrocephalus and hybrid Clarias macrocephalus and Clarias galipinus).

    PubMed

    Shirai, Nobuya; Suzuki, Hiramitsu; Tokairin, Shigeru; Ehara, Hiroshi; Wada, Shun

    2002-07-01

    The effects of dietary lipids and seasonal variation on the lipids of wild and cultured catfish (Japanese catfish, Silurus asotus; Thai catfish, Clarias macrocephalus and hybrid Clarias macrocephalus x Clarias galipinus) were determined by analysis of the lipid content and fatty acid composition of their dorsal meat. The predominant fatty acids of dorsal meat were 16:0, 18:1n-9, 18:2n-6, 20:4n-6 (arachidonic acid, AA), and 22:6n-3 (docosahexaenoic acid, DHA). The DHA content in the diet of Japanese catfish was higher than that in the diet of Thai catfish, and this was reflected in the dorsal meat of the Japanese catfish, which had a remarkably high percentage of DHA compared with the meat of the Thai catfish. Cultured Japanese catfish had a higher percentage of 18:2n-6 than Thai fish and a lower percentage of AA in winter than in summer season. There were also seasonal variations in the percentage of n-6 fatty acids in Japanese catfish. In summer, the fatty acid composition of the cultured Japanese catfish was similar to that of the wild catfish. These fatty acid changes in the lipid classes, triacylglycerol, phosphatidylcholine and phosphatidylethanolamine were similar to those observed for total lipids. These results indicate that the percentage of DHA in the dorsal meat of catfish is influenced by dietary fatty acid, and it may be that it can be increased in cultivated fish by administering a diet containing a large amount of DHA.

  16. Apolipoprotein A1 in channel catfish: transcriptional analysis, antimicrobial activity, and efficacy as plasmid DNA immunostimulant against Aeromonas hydrophila infection.

    PubMed

    Pridgeon, Julia W; Klesius, Phillip H

    2013-10-01

    The objectives of this study were to: 1) determine transcriptional profiles of apolipoprotein A1 (ApoA1) in collected channel catfish tissues after infection with Aeromonas hydrophila by bath immersion; 2) investigate whether recombinant channel catfish apolipoprotein A1 produced in Escherichia coli expression system possesses any antimicrobial activity against A. hydrophila; 3) evaulate whether recombinant channel catfish apolipoprotein A1 plasmid DNA could be used as immunostimulant to protect fish against A. hydrophila infection. Quantitative PCR revealed that the transcription levels of ApoA1 in infected catfish were significantly (P < 0.05) more induced in the anterior kidney. Recombinant apoA1 produced in E. coli expression system exhibited lytic activity against Gram-positive Micrococcus lysodeikticus and Gram-negative A. hydrophila. When pcDNA3.2-vectored recombinant apoA1 was transfected in channel catfish gill cells G1B, the over-expression of pcDNA-ApoA1 offered significant (P < 0.05) protection to G1B cells against A. hydrophila infection. When channel catfish were intraperitoneally injected with QCDCR adjuvant formulated pcDNA-ApoA1 and challenged with a highly virulent A. hydrophila strain AL-09-71 at two days post injection, pcDNA-ApoA1 injection offered 100% protection to channel catfish. Macrophages of fish injected with pcDNA-ApoA1 produced significantly (P < 0.05) higher amounts of reactive oxygen species and nitric oxide than that of fish injected with pcDNA vector alone. Our results suggest that pcDNA-ApoA1 could be used as a novel immunostimulant to offer immediate protection to catfish against A. hydrophila infection.

  17. Recombinant goose-type lysozyme in channel catfish: lysozyme activity and efficacy as plasmid DNA immunostimulant against Aeromonas hydrophila infection.

    PubMed

    Pridgeon, Julia W; Klesius, Phillip H; Dominowski, Paul J; Yancey, Robert J; Kievit, Michele S

    2013-10-01

    The objectives of this study were: 1) to investigate whether recombinant channel catfish lysozyme-g (CC-Lys-g) produced in Escherichia coli expression system possesses any lysozyme activity; and 2) to evaluate whether channel catfish lysozyme-g plasmid DNA could be used as an immunostimulant to protect channel catfish against Aeromonas hydrophila infection. Recombinant CC-Lys-g produced in E. coli expression system exhibited significant (P < 0.05) lytic activity against Gram-positive Micrococcus lysodeikticus and Gram-negative A. hydrophila. When pcDNA3.2-vectored recombinant channel catfish lysozyme-g (pcDNA-Lys-g) was transfected in channel catfish gill cells G1B, the over-expression of pcDNA-Lys-g offered significant (P < 0.05) protection to G1B cells against A. hydrophila infection. When channel catfish were intraperitoneally injected with pcDNA-Lys-g along with an adjuvant QCDCR, the transcriptional level of Lys-g was significantly (P < 0.05) increased. When pcDNA-Lys-g injected fish was challenged with a highly virulent A. hydrophila strain AL-09-71, pcDNA-Lys-g offered 100% protection to channel catfish at two days post DNA injection. Macrophages of fish injected with pcDNA-Lys-g produced significantly (P < 0.05) higher amounts of reactive oxygen species and nitric oxide than that of fish injected with pcDNA vector alone at two days post DNA injection. Taken together, our results suggest that pcDNA-Lys-g could be used as a novel immunostimulant to offer immediate protection to channel catfish against A. hydrophila infection.

  18. A Miocene submarine volcano at Low Layton, Jamaica

    NASA Technical Reports Server (NTRS)

    Wadge, G.

    1982-01-01

    A submarine fissure eruption of Upper Miocene age produced a modest volume of alkaline basalt at Low Layton, on the north coast of Jamaica. The eruption occurred in no more than a few hundred meters of water and produced a series of hyaloclastites, pillow breccias and pillow lavas, massive lavas, and dikes with an ENE en echelon structure. The volcano lies on the trend of one of the island's major E-W strike-slip fault zones; the Dunavale Fault Zone. The K-Ar age of the eruption of 9.5 plus or minus 0.5 Ma. B.P. corresponds to an extension of the Mid-Cayman Rise spreading center inferred from magnetic anomalies and bathymetry of the Cayman Trough to the north and west of Jamaica. The Low Layton eruption was part of the response of the strike-slip fault systems adjacent to this spreading center during this brief episode of tectonic readjustment.

  19. Silica diagenesis in Santa Cruz mudstone, Late Miocene, California

    SciTech Connect

    El-Sabbagh, D.

    1987-05-01

    The silica-rich upper Miocene Santa Cruz Mudstone is similar to the Miocene Monterey Formation. Previous studies have suggested the Santa Cruz Mudstone was not buried deeply nor had it undergone extensive diagenesis. Because opaline diagenesis is temperature dependent, the author examined the silica diagenesis of the Santa Cruz Mudstone using scanning electron microscopy and x-ray diffraction methods to study its burial history. In a series of samples from Santa Cruz to Davenport, California (over 16 km), opal-CT is the dominant silica phase present and clay minerals are notably absent. The d(101)-spacing values of opal-CT range from 4.11 A (Santa Cruz area) to 4.06 A (north of Santa Cruz), exhibiting the complete range of d(101)-spacing values found in opal-CT zones. Scanning electron micrographs of crystalline microtextures show rosettes of opal-CT (lepispheres) in cavities of samples with medium to high d(101)-spacing values. The morphology of lepisphere crystallites grades from bladed to spiny with decreasing d(101)-spacing values, reflecting an internal crystal ordering with increased diagenesis. Further diagenetic changes occurred in a sample with 4.06 A d(101)-spacing where incipient quartz crystals signal the initial conversion of opal-CT to microcrystalline quartz. Silica diagenesis demonstrates that burial temperatures surpassed the range of opal-A to opal-CT conversion and approached conversion temperatures (55/sup 0/C to 110/sup 0/C) of opal-CT to microcrystalline quartz. The conversion occurred when the Santa Cruz Mudstone was buried over 1900 m (depth calculated from a geohistory diagram). This burial temperature brings the Santa Cruz Mudstone within the oil generation window, and could account for the presence of hydrocarbons in the unit.

  20. Miocene reef and nonreef carbonate rocks in Japan

    SciTech Connect

    Konishi, K.

    1988-01-01

    Japan's main islands experienced temperature climates throughout the Neogene with a tropical invasion around 16 Ma (early middle Miocene). This climatic warming, accompanied by a eustatic sea level rise, caused the unusual occurrence of reef facies, mangrove deposits, and lateritic beds in Japan. In cooler climates both before and after reef growth, sediments rich in bryozoan and algal material were widespread. Reef rocks emplaced as penecontemporaneous olistoliths in deep-water clastics at the Pacific coast of central Honshu are characterized by a wide lithologic spectrum, ranging from grainstone to bindstone. These rocks include rudstone and floatstone, which are rich in coralline algae (encrusting forms such as Lithophyllum and Mesophyllum and articulate forms such as Amphiroa) and codiacean algae (Halimeda) with hermatypic corals and large benthic formainifera (e.g., Nephrolepidina and Miogypsina) being less common. Two types of dolomite occur: (1) limpid dolomite with O/sup 18/ = -5.77 and with bipyramidal quartz and (2) microcrystalline dolomite with O/sup 18/ = 2.00 and with length-slow chalcedony. While microcrystalline dolomite tends to predominate in muddy matrix material, limpid dolomite appears to fill pores, some of which are moldic. Younger nonreef carbonate rocks, as occur on the Noto Peninsula of central Honshu, are commonly cross-bedded, contain Bryozoa, mollusks, small foraminifera, and echinoids, and are locally dolomitized. These dolomites are ascribed to a mixed-water origin. A different type of nonreef, yet reservoir-forming, dolostone occurs in the late middle Miocene of northeast Honshu and is interpreted to have formed as a transformation from bathyal opal.

  1. Miocene to Pleistocene osmium isotopic records of the Mediterranean sediments

    NASA Astrophysics Data System (ADS)

    Kuroda, Junichiro; Jiménez-Espejo, Francisco J.; Nozaki, Tatsuo; Gennari, Rocco; Lugli, Stefano; Manzi, Vinicio; Roveri, Marco; Flecker, Rachel; Sierro, Francisco J.; Yoshimura, Toshihiro; Suzuki, Katsuhiko; Ohkouchi, Naohiko

    2016-01-01

    In the late Miocene the Mediterranean Sea experienced a salinity crisis and thick sequences of evaporites precipitated across the deep and marginal basins. In this study we report Os isotopic records from Deep Sea Drilling Project and Ocean Drilling Project cores in the Mediterranean: the Balearic Sea (Site 372), the Tyrrhenian Sea (Site 654), the Ionian Basin (Site 374), and the Florence Rise (Sites 375-376), as well as Integrated Ocean Drilling Project Site U1387 in Gulf of Cadiz, North Atlantic. Pliocene-Pleistocene sediments at all sites show 187Os/188Os values close to that of the coeval ocean water, indicating that the Mediterranean was connected to the North Atlantic. Evaporitic sediments deposited during the latest Miocene, however, have 187Os/188Os values significantly lower than coeval ocean water values. The offset of the Mediterranean evaporite 187Os/188Os is attributed to limited exchange with the North Atlantic during the Messinian salinity crisis. The source of unradiogenic Os is likely to be weathering of ultramafic rocks (ophiolites) cropping out in the Mediterranean's drainage basins. Based on a box model we estimated the amount of unradiogenic Os and the Atlantic-Mediterranean exchange rate to explain this offset. Os isotopic ratios of the pre-evaporite sediments in the western Mediterranean are almost identical to that of the coeval ocean water. In contrast, equivalent sediments from the Florence Rise have significantly lower 187Os/188Os values. The offset in the Os isotopic ratio on the Florence Rise is attributed either to limited water exchange between eastern and western Mediterranean or to local effects associated with exhumation of the Troodos ophiolites (Cyprus).

  2. Miocene to Pleistocene Exhumation of the Southern European Alps

    NASA Astrophysics Data System (ADS)

    Reverman, R.; Fellin, M.; Herman, F.; Willett, S.

    2011-12-01

    We apply apatite fission-track, (U-Th-Sm)/He dating, 4He/3He diffusion profiles, and OSL thermochronology to construct a complete thermal history and constrain the exhumation and topographic evolution of the Adamello complex in the Southern European Alps. The Adamello complex is an Eocene-Oligocene pluton emplaced at a depth of 7 km, now exposed and dissected by deep valleys with a local relief of more than 2 km, which drain into larger fluvial systems overdeepened during the Messinian salinity crisis. Our aim is to determine which major erosional event during the Miocene-to-Pleistocene evolution of the Alps most affected the topographic development of the Adamello complex. We quantify exhumation rates using multiple methods: age-elevation relationships, estimates based on exhumation of a fossil partial retention zone, and cooling histories. We then compare these estimates with those predicted from a 3-D heat conduction model including topographic relief and erosion (Pecube; Braun, 2002) paired with the Neighborhood Algorithm, which is a two stage mathematical procedure that finds models, or parameters, which minimize the misfit to the data (Sambridge, 1999a,b). The predicted tectono-geomorphic history is tested for feasibility through comparison with known timing of tectonic and erosional events. Our apatite fission-track and (U-Th-Sm)/He results indicate that relief development alone cannot account for the episodic history and suggest a possible coupling between tectonics and erosion in the late Miocene, where the establishment of major drainages coincides with a period of increased rock uplift. The initial results from even lower temperature methods, 4He/3He diffusion profiles and OSL thermochronology, suggest an increase in exhumation rates in the Plio-Pleistocene, most likely associated with glacial reshaping.

  3. Gulf of Mexico miocene CO₂ site characterization mega transect

    SciTech Connect

    Meckel, Timothy; Trevino, Ramon

    2014-12-01

    This project characterized the Miocene-age sub-seafloor stratigraphy in the near-offshore portion of the Gulf of Mexico adjacent to the Texas coast. The large number of industrial sources of carbon dioxide (CO₂) in coastal counties and the high density of onshore urbanization and environmentally sensitive areas make this offshore region extremely attractive for long-term storage of carbon dioxide emissions from industrial sources (CCS). The study leverages dense existing geologic data from decades of hydrocarbon exploration in and around the study area to characterize the regional geology for suitability and storage capacity. Primary products of the study include: regional static storage capacity estimates, sequestration “leads” and prospects with associated dynamic capacity estimates, experimental studies of CO₂-brine-rock interaction, best practices for site characterization, a large-format ‘Atlas’ of sequestration for the study area, and characterization of potential fluid migration pathways for reducing storage risks utilizing novel high-resolution 3D (HR3D) seismic surveys. In addition, three subcontracted studies address source-to-sink matching optimization, offshore well bore management and environmental aspects. The various geologic data and interpretations are integrated and summarized in a series of cross-sections and maps, which represent a primary resource for any near-term commercial deployment of CCS in the area. The regional study characterized and mapped important geologic features (e.g., Clemente-Tomas fault zone, the regionally extensive Marginulina A and Amphistegina B confining systems, etc.) that provided an important context for regional static capacity estimates and specific sequestration prospects of the study. A static capacity estimate of the majority of the Study area (14,467 mi2) was estimated at 86 metric Gigatonnes. While local capacity estimates are likely to be lower due to reservoir-scale characteristics, the

  4. Catch of channel catfish with tandem-set hoop nets and gill nets in lentic systems of Nebraska

    USGS Publications Warehouse

    Richters, Lindsey K.; Pope, Kevin L.

    2011-01-01

    Twenty-six Nebraska water bodies representing two ecosystem types (small standing waters and large standing waters) were surveyed during 2008 and 2009 with tandem-set hoop nets and experimental gill nets to determine if similar trends existed in catch rates and size structures of channel catfish Ictalurus punctatus captured with these gears. Gear efficiency was assessed as the number of sets (nets) that would be required to capture 100 channel catfish given observed catch per unit effort (CPUE). Efficiency of gill nets was not correlated with efficiency of hoop nets for capturing channel catfish. Small sample sizes prohibited estimation of proportional size distributions in most surveys; in the four surveys for which sample size was sufficient to quantify length-frequency distributions of captured channel catfish, distributions differed between gears. The CPUE of channel catfish did not differ between small and large water bodies for either gear. While catch rates of hoop nets were lower than rates recorded in previous studies, this gear was more efficient than gill nets at capturing channel catfish. However, comparisons of size structure between gears may be problematic.

  5. Efficacy of oxytetracycline hydrochloride bath immersion to control external columnaris disease on walleye and channel catfish fingerlings

    USGS Publications Warehouse

    Rach, J.J.; Johnson, Aaron H.; Rudacille, J.B.; Schleis, S.M.

    2008-01-01

    The efficacy of oxytetracycline hydrochloride (OTC-HCl) in controlling external columnaris disease caused by Flavobacterium columnare on fingerling walleyes Sander vitreus and channel catfish Ictalurus punctatus was evaluated in two on-site hatchery trials. Microscopic examination of skin scrapings before treatment confirmed the presence of bacteria with characteristics indicative of F. columnare.in separate trials, walleyes (4.4 g) and channel catfish (1.5 g) were exposed to 60-min static bath treatments of OTC-HCl at 0, 10, and 20 mg/L (walleyes) or 0, 10, 20, and 40 mg/L (channel catfish) on three consecutive days. Each treatment regimen was tested in triplicate, and each replicate contained either 30 walleyes or 55 channel catfish. Posttreatment presumptive disease diagnosis indicated that F. columnare was the disease agent causing the mortality in both species of fish. Walleye survival at 10 d posttreatment was greater in the 10- and 20-mg/L treatment groups than in the control group; however, only the 10-mg/L treatment significantly (P < 0.05) increased walleye survival in comparison with controls. In the channel catfish trial, survival at 10 d posttreatment was significantly (P < 0.05) greater for all OTC-HCl treatment groups relative to controls. Results from these trials indicated that OTC-HCl treatments effectively reduced mortality in walleyes (10 mg/L only) and channel catfish infected with F. columnare. ?? Copyright by the American Fisheries Society 2008.

  6. Miocene ocean circulation inferred from marine carbon cycle modeling combined with benthic isotope records

    NASA Astrophysics Data System (ADS)

    Butzin, Martin; Lohmann, Gerrit; Bickert, Torsten

    2011-02-01

    In a modeling sensitivity study we investigate the evolution of the ocean circulation and of marine carbon isotope (δ13C) records during the Miocene (about 23-5 million years ago). For this purpose we ran an ocean-circulation carbon cycle model of intermediate complexity (Large Scale Geostrophic- Hamburg Ocean Carbon Cycle Model, version 2s) exploring various seaway configurations. Our investigations confirm that the Central American Seaway played a decisive role in the history of the Miocene ocean circulation. In simulations with a deep Central American Seaway (depth range 1-3 km), typical for the early to middle Miocene, deep water production in the North Atlantic is absent or weak, while the meridional overturning circulation is dominated by water mass formation in the Southern Ocean. Deep water formation in the North Atlantic begins when the Central American Seaway shoals to a few hundreds of meters, which is typical for the late Miocene. Our results do not support ideas that the mid-Miocene closing of the Eastern Tethys contributed to Antarctic glaciation. On the other hand, we find some water exchange between the Indian Ocean and the Atlantic via the Eastern Tethys during the early Miocene. Our model results for the Atlantic meridional overturning circulation and for Atlantic δ13C during the late Miocene are largely independent from depth variations of the Greenland-Scotland Ridge. To a large extent, the evolution of Miocene deep-sea δ13C records can be explained with large-scale ocean circulation changes. Our model-data comparison for the middle and early Miocene suggests that during the early Neogene the seaway effect on benthic δ13C may have been superimposed by further factors such as climate regime shifts and/or terrestrial carbon cycle changes.

  7. Miocene climate seasonality in southern India - first direct evidence for a weak Indian monsoon during the Middle Miocene Climate Optimum

    NASA Astrophysics Data System (ADS)

    Piller, W. E.; Reuter, M.; Kern, A. K.; Harzhauser, M.

    2012-04-01

    The Asian monsoon is an integral component of the global climate system. This large-scale atmospheric circulation comprises the East Asian summer and winter monsoon and the Indian monsoon subsystems, all characterized by seasonal reversing winds and precipitation changes associated with asymmetric heating of land and sea. The Neogene monsoon history is mainly reconstructed from chemical and physical weathering rates recorded in widely continuous marine sequences of the Indus Fan, Bengal Fan and South China Sea, which, depending on the source, physiography and sediment, indicate drier or wetter climates. These indirect climate proxies display an unusually dry period during the Middle Miocene Climate Optimum (MMCO, 16.5-15 Ma). As part of the FWF-projects P18189, P21414 and P23492, we present an Early/Middle Miocene coastal palynoflora record from the siliciclastic Ambalapuzha Formation at the coastal cliff of Varkala (Kerala Basin, SW India). Pollen assemblages and facies document a coastal wetland with mangrove vegetation. The Coexistence Approach was applied for palaeoclimatic reconstructions. This method uses climatic tolerances of all nearest living relatives known for a fossil flora by assuming that the tolerances of a fossil taxon are not significantly different from its modern counterpart. The maximum overlap of the environmental tolerances of all nearest living relatives (coexistence interval) is then regarded as being indicative of the most likely palaeoenvironment. By enquiring the Palaeoflora Database (http://www.palaeoflora.de/), the palaeoclimatic parameters of the pollen flora were calculated. The reconstructed climatic parameters for the MMCO show a seasonal precipitation pattern with a dry and a wet period and moderate rainfalls during the warmest period, which is comparable to the present day annual precipitation cycle in coastal Kerala, and affirms the presence of a monsoon-like atmospheric circulation over South India during the MMCO. However, the

  8. Late Miocene teeth from Middle Awash, Ethiopia, and early hominid dental evolution.

    PubMed

    Haile-Selassie, Yohannes; Suwa, Gen; White, Tim D

    2004-03-01

    Late Miocene fossil hominid teeth recovered from Ethiopia's Middle Awash are assigned to Ardipithecus kadabba. Their primitive morphology and wear pattern demonstrate that A. kadabba is distinct from Ardipithecus ramidus. These fossils suggest that the last common ancestor of apes and humans had a functionally honing canine-third premolar complex. Comparison with teeth of Sahelanthropus and Orrorin, the two other named late Miocene hominid genera, implies that these putative taxa are very similar to A. kadabba. It is therefore premature to posit extensive late Miocene hominid diversity on the basis of currently available samples.

  9. Phylogenetic sequence analysis, recombinant expression, and tissue distribution of a channel catfish estrogen receptor beta

    USGS Publications Warehouse

    Xia, Zhenfang; Gale, William L.; Chang, Xiaotian; Langenau, David; Patino, Reynaldo; Maule, Alec G.; Densmore, Llewellyn D.

    2000-01-01

    An estrogen receptor β (ERβ) cDNA fragment was amplified by RT-PCR of total RNAextracted from liver and ovary of immature channel catfish. This cDNA fragment was used to screen an ovarian cDNA library made from an immature female fish. A clone was obtained that contained an open reading frame encoding a 575-amino-acid protein with a deduced molecular weight of 63.9 kDa. Maximum parsimony and Neighbor Joining analyses were used to generate a phylogenetic classification of channel catfish ERβ on the basis of 25 full-length teleost and tetrapod ER sequences. The consensus tree obtained indicated the existence of two major vertebrate ER subtypes, α and β. Within each subtype, and in accordance with established phylogenetic relationships, teleost and tetrapod ER were monophyletic confirming the results of a previous analysis (Z. Xiaet al., 1999, Gen. Comp. Endocrinol. 113, 360–368). Extracts of COS-7 cells transfectedwith channel catfish ERβ cDNA bound estrogen with high affinity (Kd = 0.21 nM) and specificity. The affinity of channel catfish ERβ for estrogen was higher than previously reported for channel catfish ERα. As determined by qualitative RT-PCR, the tissue distributions of ERα and ERβ were similar but not identical. Both ER subtypes were present in ovary and testis. ERα was found in all other tissues examined from juvenile and mature fish of both sexes. ERβ was also found in most tissues except, in most cases, whole blood and head kidney. Interestingly, the pattern of expression of ER subtypes in head kidney always corresponded to the pattern in whole blood. In conclusion, we isolated a channel catfish ERβ with ligand-binding affinity and tissue expression patterns different from ERα. Also, we confirmed the validity of our previously proposed general classification scheme for vertebrate ER into α and β subtypes and within each subtype, into teleost and tetrapod clades.

  10. Novel transcripts of the estrogen receptor α gene in channel catfish

    USGS Publications Warehouse

    Patino, Reynaldo; Xia, Zhenfang; Gale, William L.; Wu, Chunfa; Maule, Alec G.; Chang, Xiaotian

    2000-01-01

    Complementary DNA libraries from liver and ovary of an immature female channel catfish were screened with a homologous ERα cDNA probe. The hepatic library yielded two new channel catfish ER cDNAs that encode N-terminal ERα variants of different sizes. Relative to the catfish ERα (medium size; 581 residues) previously reported, these new cDNAs encode Long-ERα (36 residues longer) and Short-ERα (389 residues shorter). The 5′-end of Long-ERα cDNA is identical to that of Medium-ERα but has an additional 503-bp segment with an upstream, in-frame translation-start codon. Recombinant Long-ERα binds estrogen with high affinity (Kd = 3.4 nM), similar to that previously reported for Medium-ERα but lower than reported for catfish ERβ. Short-ERα cDNA encodes a protein that lacks most of the receptor protein and does not bind estrogen. Northern hybridization confirmed the existence of multiple hepatic ERα RNAs that include the size range of the ERα cDNAs obtained from the libraries as well as additional sizes. Using primers for RT-PCR that target locations internal to the protein-coding sequence, we also established the presence of several ERα cDNA variants with in-frame insertions in the ligand-binding and DNA-binding domains and in-frame or out-of-frame deletions in the ligand-binding domain. These internal variants showed patterns of expression that differed between the ovary and liver. Further, the ovarian library yielded a full-length, ERα antisense cDNA containing a poly(A) signal and tail. A limited survey of histological preparations from juvenile catfish by in situ hybridization using directionally synthesized cRNA probes also suggested the expression of ERα antisense RNA in a tissue-specific manner. In conclusion, channel catfish seemingly have three broad classes of ERα mRNA variants: those encoding N-terminal truncated variants, those encoding internal variants (including C-terminal truncated variants), and antisense mRNA. The sense variants may

  11. Late Miocene uplift and doming of Madagascar: topographic implications

    NASA Astrophysics Data System (ADS)

    Delaunay, Antoine; Robin, Cecile; Guillocheau, François; Dall'Asta, Massimo; Calves, Gérôme

    2016-04-01

    Madagascar is an Archean to Neoproterozoic continental crust surrounded by transform, oblique and divergent margins: the oblique Morondava Basin to the west, pounded by the Davie Fracture Zone, and to the north, the divergent Mahajanga (Majunga) Basin connected to the Somali Oceanic Basin. This 1600 km long island is a high axial plateau with elevations from 1200 to 1800m. The top of the plateau corresponds to weathered planation surfaces (etchplains), bounded by more or less high scarps. We here present geological arguments for the age and the timing of the Madagascar Plateau. This analysis is based on a double, coupled analysis of the onshore geomorphology (stepped planation surfaces) and the offshore margin stratigraphy (seismic stratigraphy and wells). The geomorphological analysis is based on a characterization, a mapping and dating of stepped planation surfaces (mantled to stripped etchplains, pediments to pediplains). The dating is based on their geometrical relationships with dated magmatic rocks. The difference of elevation between two planation surfaces (corresponding to local base level) provides a proxy of the uplift. The sequence stratigraphic analysis is based on a biostratigraphic reevaluation of 4 industrial wells (foraminifers and nannofossils on cuttings). Uplift periods are characterized by (1) seaward tiltings of the margins overlain by planar reflectors, (2) forced regression wedges and (3) upstream erosions of older sediments recorded by fauna/flora reworking. (1) During Paleocene to Middle Miocene times (66 to 13 Ma), Madagascar is a quite flat low elevation domain with remnants of an oldest pre-Madagascar Trap (90 Ma) surface. This low relief is highly weathered with growth of numerous lateritic profiles and surrounded by large carbonate platforms with no siliciclastic sands influx. (2) The Late Miocene is the paroxysm of uplift with (1) a tilting of the margin (Morondova), (2) an increase of the siliciclastic sand flux since middle Miocene

  12. Significant Role of the East Antarctic Ice Sheet in Miocene Global Climate Change

    NASA Astrophysics Data System (ADS)

    Cook, C. P.; Martin, E. E.

    2015-12-01

    The Miocene was a period of climatic extremes, with indirect records suggesting major retreat and advance of Antarctica's ice sheets. Climatic warmth of the Early Miocene and Miocene Climatic Optimum (MCO; ~17-15 Ma) was followed by cooler conditions and growth of the East Antarctic ice sheet (EAIS) during the middle Miocene Climate Transition (MMCT; ~14-15 Ma). This cooling occured with decreasing CO2 levels and deepening of the CCD. Weathering on Antarctica associated with ice sheet variability likely played a role in global climate, but the temporal and spatial evolution of the EAIS is not constrained well enough to characterize this relationship. We use Pb and Nd isotopes of authigenic Fe-Mn oxide coatings, which preserve bottom water compositions, and associated detrital bulk deep sea sediments, to provide new insights into continental weathering and ice sheet evolution during the Miocene. Comparison of Pb IC's of coupled detrital and authigenic phases are used to reconstruct chemical weathering patterns. In contrast, Nd IC's provide insights into bedrock erosion and ocean circulation patterns. Study sites are located on Maud Rise (ODP Sites 689 and 690) in the Atlantic sector, and on Kerguelen Plateau (ODP Site 744) off of Prydz Bay. Results reveal increased offsets between seawater and detrital Pb IC's during the Early Miocene and MCO, and decreased values and offsets during the MMCT and Late Miocene for all three sites, a pattern that is most pronounced at Maud Rise. There is a long-term trend to more unradiogenic Nd IC and more radiogenic Pb IC values of detrital sediments during the MMCT and Late Miocene. Comparison with modern day coretop data suggest this pattern indicates increased supply of local continental material. Our data suggest enhanced chemical weathering accompanied reduced ice volume and high atmospheric CO2 during the Early Miocene and MCO, likely contributing to the drawdown of CO2 that lead to the MMCT, as well as deepening of the CCD

  13. Early Miocene origin and cryptic diversification of South American salamanders

    PubMed Central

    2013-01-01

    Background The currently recognized species richness of South American salamanders is surprisingly low compared to North and Central America. In part, this low richness may be due to the salamanders being a recent arrival to South America. Additionally, the number of South American salamander species may be underestimated because of cryptic diversity. The aims of our present study were to infer evolutionary relationships, lineage diversity, and timing of divergence of the South American Bolitoglossa using mitochondrial and nuclear sequence data from specimens primarily from localities in the Andes and upper Amazon Basin. We also estimated time of colonization of South America to test whether it is consistent with arrival via the Panamanian Isthmus, or land bridge connection, at its traditionally assumed age of 3 million years. Results Divergence time estimates suggest that Bolitoglossa arrived in South America from Central America by at least the Early Miocene, ca. 23.6 MYA (95% HPD 15.9-30.3 MYA), and subsequently diversified. South American salamanders of the genus Bolitoglossa show strong phylogeographic structure at fine geographic scales and deep divergences at the mitochondrial gene cytochrome b (Cytb) and high diversity at the nuclear recombination activating gene-1 (Rag1). Species often contain multiple genetically divergent lineages that are occasionally geographically overlapping. Single specimens from two southeastern localities in Ecuador are sister to the equatoriana-peruviana clade and genetically distinct from all other species investigated to date. Another single exemplar from the Andes of northwestern Ecuador is highly divergent from all other specimens and is sister to all newly studied samples. Nevertheless, all sampled species of South American Bolitoglossa are members of a single clade that is one of several constituting the subgenus Eladinea, one of seven subgenera in this large genus. Conclusions The ancestors of South American salamanders

  14. Astrochronology of the Mediterranean Early and Middle Miocene

    NASA Astrophysics Data System (ADS)

    Hüsing, Silja Katherine; Hilgen, Frederik; Krijgsman, Wout; Turco, Elena

    2013-04-01

    An accurate high-resolution astronomical time scale is of crucial importance in Earth Sciences. It allows not only to reconstruct astronomical climate forcing but also to precisely date geological events, to determine rates of changes, and to discriminate between cause and effect related to fundamental processes controlling Earth's history. The accuracy, precision and resolution of the geological time scale for the Neogene have improved considerably over the last decades, thanks to the combination of an integrated stratigraphic approach and astronomical tuning, which resulted in the "Astronomically Tuned Neogene Time Scale" (ATNTS2004, ATNTS2012). The most recent ATNTS2012 (Gradstein et al. 2012) includes direct astronomical ages for chron boundaries back to ~15 Ma based on the tuning of marine successions from the Mediterranean. Reversal ages for the interval between 15 and 23 Ma were calculated from a seafloor-spreading-rate history model in combination with limited astronomical control. Completing the Neogene time scale should be exclusively based on deep marine sections. The most suitable section in the Mediterranean is the Monte dei Corvi-La Vedova-Spiaggia della Scalaccia composite section near Ancona in Italy as an integrated stratigraphy and astronomical tuning has been established for the Late to Middle Miocene interval (Hüsing et al. 2007, 2009, 2010, Mourik et al. 2010, Turco et al. 2011). The resultant astronomically tuned reversal ages have already been incorporated into the GTS (Gradstein et al. 2012). The section has now been further extended into the Early Miocene along the cliffs near Ancona (Spiaggia della Scalaccia composite section). We will present our high-resolution integrated stratigraphy including cyclostratigraphy, biostratigraphy, magnetostratigraphy, colour and elemental proxy records. The sedimentary cycle pattern is very complex in this interval, and we thus use the detailed colour and elemental proxy records to achieve a match with

  15. Deformation of the late Miocene to Pliocene Inyo Surface, eastern Sierra region, California

    USGS Publications Warehouse

    Jayko, A.S.

    2009-01-01

    A middle and late Miocene erosion surface, the Inyo Surface, underlies late Miocene mafic flows in the White Mountains and late Miocene and (or) early Pliocene flows elsewhere in the eastern Sierra region. The Inyo Surface is correlated with an erosion surface that underlies late Miocene mafic flows in the central and northern Sierra Nevada. The mafic flows had outpourings similar to flood basalts, although of smaller volume, providing paleohorizontal and paleolowland indicators. The flows filed and locally topped the existing landscape forming broad plateau-like flats. Topographic relief in the region was characterized by weathered and rounded slopesp rior to late Miocene mafic magmatism. Relicts of the older landscape lie adjacent to late Miocene and early Pliocene basalt-covered lowlands that now occur within the crests of ranges that have 2500-3000 m relief and dramatically steep escarpments. Late Miocene mafic flows that lie on the crest of the Sierra Nevada adjacent to the White Mountains predate significant activity on the Sierra Nevada frontal fault zone. These deposits and accompanying erosion surfaces provide excellent strain markers for reconstructing part of the Walker Lane north of the Garlock fault and west of the Amargosa drainage, here referred to as the eastern Sierra region. The Inyo Surface is a compound erosional surface that records at least four major erosion events during the Cenozoic. These four surfaces were first recognized on the Kern Plateau and named from oldest to youngest, the Summit Upland, the Subsummit Plateau, the Chagoopa Plateau, and the Canyon. The three older surfaces have also been subsequently modifi ed by Pleistocene glaciation. The compound erosion surface, which is locally overlain by late Miocene mafic flows in the northern and central Sierra Nevada, is here referred to as the Lindgren Surface. Correlatives in the eastern Sierra region are found in the White Mountains, Inyo Mountains, Darwin Plateau, Coso Range, and

  16. Prevalence and characteristics of Aeromonas species isolated from processed channel catfish.

    PubMed

    Wang, C; Silva, J L

    1999-01-01

    From August 1994 to May 1995, 238 channel catfish fillets collected from three processing plants in the Mississippi Delta at four time periods were tested for the presence of Aeromonas species. Identification of Aeromonas spp. was accomplished using an automated Vitek bioassay system with gram-negative and nonfermenter cards. Approximately 36.1% were positive for A. hydrophila, 35.7% for A. sobria, and 10.9% for A. caviae. All three Aeromonas spp. were found in all three processing plants, and the incidence of A. hydrophila contamination appeared to be higher in summer than other seasons. Eighty-six percent of the Aeromonas isolates were hemolytic on 5% sheep blood agar plates. Most isolates were susceptible to chloramphenicol, neomycin, streptomycin, and trimethoprim-sulfamethoxazole and resistant to ampicillin and bacitracin. Results suggest that Aeromonas spp. are prevalent in processed channel catfish, and most isolates are hemolytic and resistant to ampicillin and bacitracin. PMID:9921825

  17. Heteromorphic sex chromosome system with an exceptionally large Y chromosome in a catfish Steindachneridion sp. (Pimelodidae).

    PubMed

    Swarça, A C; Fenocchio, A S; Cestari, M M; Bertollo, L A C; Dias, A L

    2006-01-01

    The chromosomes and banding patterns of Steindachneridion sp., a large catfish (Pimelodidae), endemic to the Iguaçu River, Brazil, were analyzed using conventional (C-, G-banding) and restriction enzyme banding methods. The same diploid number (2n = 56) as in other members of the genus and the family was found but the karyotype displayed an XX/XY sex chromosome system. The X chromosome was the smallest submetacentric, while the Y was the largest chromosome in the karyotype. Meiotic analysis showed 27 autosomal bivalents plus one heteromorphic XY bivalent during spermatogenesis. Sex chromosomes had no particular pattern after C-banding but G- and restriction enzyme bandings showed specific banding characteristics. The present finding represents the first report of a well-differentiated and uncommon sex chromosome system in the catfish family Pimelodidae.

  18. Explosive development of pectoral muscle fibres in large juvenile blue catfish Ictalurus furcatus.

    PubMed

    Lahiri, S; Fine, M L

    2015-11-01

    As part of an effort on scaling of pectoral spines and muscles, the basis for growth was examined in six pectoral muscles in juvenile blue catfish Ictalurus furcatus, the largest catfish in North America. Fibre number increases slowly in fish from 13.0 to 26.4 cm in total length, doubles by 27.0 cm and remains stable in larger individuals. Simultaneously, mean fibre diameter decreases by half, caused by the addition of new small fibres, before increasing non-linearly in larger fish. The orders of magnitude disparity between the size at hatching and the size of large adults may have selected for rapid muscle fibre addition at a threshold size. PMID:26399583

  19. Occurrence of Vibrio vulnificus and toxigenic Vibrio parahaemolyticus on sea catfishes from Galveston Bay, Texas.

    PubMed

    Baumeister, Leslie; Hochman, Mona E; Schwarz, John R; Brinkmeyer, Robin

    2014-10-01

    Dorsal and pectoral fin spines from two species of sea catfishes (Bagre marinus and Ariopsis felis) landed at 54 sites in Galveston Bay, Texas, and its sub-bays from June to October 2005 were screened with traditional cultivation-based assays and quantitative PCR assays for Vibrio vulnificus and Vibrio parahaemolyticus. V. vulnificus was present on 51.2% of fish (n = 247), with an average of 403 ± 337 SD cells g(-1). V. parahaemolyticus was present on 94.2% (n = 247); 12.8% tested positive for the virulence-conferring tdh gene, having an average 2,039 ± 2,171 SD cells g(-1). The increasing trend in seafood consumption of "trash fishes" from lower trophic levels, such as sea catfishes, warrants evaluation of their life histories for association with pathogens of concern for human consumption.

  20. The complete mitochondrial genome of the armored catfish, Hypostomus plecostomus (Siluriformes: Loricariidae).

    PubMed

    Liu, Shikai; Zhang, Jiaren; Yao, Jun; Liu, Zhanjiang

    2016-05-01

    The complete mitochondrial genome of the armored catfish, Hypostomus plecostomus, was determined by next generation sequencing of genomic DNA without prior sample processing or primer design. Bioinformatics analysis resulted in the entire mitochondrial genome sequence with length of 16,523 bp. The H. plecostomus mitochondrial genome is consisted of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 control region, showing typical circular molecule structure of mitochondrial genome as in other vertebrates. The whole genome base composition was estimated to be 31.8% A, 27.0% T, 14.6% G, and 26.6% C, with A/T bias of 58.8%. This work provided the H. plecostomus mitochondrial genome sequence which should be valuable for species identification, phylogenetic analysis and conservation genetics studies in catfishes.

  1. Explosive development of pectoral muscle fibres in large juvenile blue catfish Ictalurus furcatus.

    PubMed

    Lahiri, S; Fine, M L

    2015-11-01

    As part of an effort on scaling of pectoral spines and muscles, the basis for growth was examined in six pectoral muscles in juvenile blue catfish Ictalurus furcatus, the largest catfish in North America. Fibre number increases slowly in fish from 13.0 to 26.4 cm in total length, doubles by 27.0 cm and remains stable in larger individuals. Simultaneously, mean fibre diameter decreases by half, caused by the addition of new small fibres, before increasing non-linearly in larger fish. The orders of magnitude disparity between the size at hatching and the size of large adults may have selected for rapid muscle fibre addition at a threshold size.

  2. Longitudinal patterns in flathead catfish relative abundance and length at age within a large river: Effects of an urban gradient

    USGS Publications Warehouse

    Paukert, C.P.; Makinster, A.S.

    2009-01-01

    We investigated the spatial variation of flathead catfish (Pylodictis olivaris) relative abundance and growth in the 274 km long Kansas River to determine if population dynamics of catfish are related to urbanization. Electrofishing was conducted at 462 random sites throughout the river in summer, 2005-2006 to collect fish. Relative abundance of age 1 fish (???200mm), subadult (>200-400mm) and adult fish (>400 mm) ranged from 0.34 to 14.67 fish h-1, mean length at age 1 was 165 (range: 128-195) mm total length (TL) and mean length at age 3 was 376 mm TL (range: 293-419mm TL). The proportion of land use within 200 m of the river edge was between 0 and 0.54 urban. River reaches with high relative abundance of age 1 flathead catfish had high relative abundance of subadult and adult catfish. River reaches with fast flathead catfish growth to age 1 had fast growth to age 3. High urban land use and riprap in the riparian area were evident in river reaches near the heavily populated Kansas City and Topeka, Kansas, USA. Reaches with increased number of log jams and islands had decreased riparian agriculture. Areas of low urbanization had faster flathead catfish growth (r = 0.67, p = 0.005). Relative abundance of flathead catfish was higher in more agricultural areas (r = -0.57, p = 0.02). Changes in land use in riverine environments may alter population dynamics of a fish species within a river. Spatial differences in population dynamics need to be considered when evaluating riverine fish populations. Published in 2008 by John Wiley & Sons Ltd.

  3. Miocene-Pliocene mantle depletion event in the northern Fossa Magna, western NE Japan

    NASA Astrophysics Data System (ADS)

    Okamura, Satoshi; Inaba, Mitsuru; Adachi, Yoshiko; Shinjo, Ryuichi

    2016-07-01

    New isotopic and trace element data presented here imply a temporal change in magma sources and thermal conditions beneath the northern Fossa Magna of NE Japan from the Miocene to the Pliocene. Less radiogenic 176Hf/177Hf and 143Nd/144Nd, high Zr/Hf, and little or no Hf anomaly characterize the Early Miocene volcanism in the northern Fossa Magna region. The mantle wedge consisted of chemically heterogeneous mantle source. Based on out isotope proxies, we propose that during the onset of subduction, influx of hot asthenospheric mantle provided sufficient heat to partially melt newly subducting sediment. Geochemical modeling demonstrates that slab-derived melt mixed with mantle wedge produces the observed isotopic and trace elemental characteristics. In the Middle Miocene, the injection of hot and depleted asthenospheric material replaced the mantle beneath the northern Fossa Magna region of NE Japan. This caused the isotopic signature of the rocks to change from enriched to depleted. Then, the mantle wedge was gradually cooled during the Middle Miocene to the Pliocene with back-arc opening ending in the Late Miocene. Slab surface temperatures were still high enough for sediments to melt but not too high (<∼780 °C) to lose zircon as a residual phase. The Late Miocene and Pliocene volcanism at the post stage of the back-arc opening is best explained by a partial melting of subducted metasediment saturated with trace quantities of zircon and rutile.

  4. Influence of throat configuration and fish density on escapement of channel catfish from hoop nets

    USGS Publications Warehouse

    Porath, Mark T.; Pape, Larry D.; Richters, Lindsey K.

    2011-01-01

    In recent years, several state agencies have adopted the use of baited, tandemset hoop nets to assess lentic channel catfish Ictalurus punctatus populations. Some level of escapement from the net is expected because an opening exists in each throat of the net, although factors influencing rates of escapement from hoop nets have not been quantified. We conducted experiments to quantify rates of escapement and to determine the influence of throat configuration and fish density within the net on escapement rates. An initial experiment to determine the rate of escapement from each net compartment utilized individually tagged channel catfish placed within the entrance (between the two throats) and cod (within the second throat) compartments of a single hoop net for overnight sets. From this experiment, the mean rate (±SE) of channel catfish escaping was 4.2% (±1.5) from the cod (cod throat was additionally restricted from the traditionally manufactured product), and 74% (±4.2) from the entrance compartments. In a subsequent experiment, channel catfish were placed only in the cod compartment with different throat configurations (restricted or unrestricted) and at two densities (low [6 fish per net] and high [60 fish per net]) for overnight sets to determine the influence of fish density and throat configuration on escapement rates. Escapement rates between throat configurations were doubled at low fish density (13.3 ± 5.4% restricted versus 26.7 ± 5.6% unrestricted) and tripled at high fish density (14.3 ± 4.9% restricted versus 51.9 ± 5.0% unrestricted). These results suggest that retention efficiency is high from cod compartments with restricted throat entrances. However, managers and researchers need to be aware that modification to the cod throats (restrictions) is needed for hoop nets ordered from manufacturers. Managers need to be consistent in their use and reporting of cod end throat configurations when using this gear.

  5. Responses of Antioxidant Enzymes in Catfish Exposed to Liquid Crystals from E-Waste

    PubMed Central

    An, Ran; Li, Yadong; Niu, Xiaojun; Yu, Hongtao

    2008-01-01

    Liquid crystals (LCs) are typically elongated organic molecules with a non-uniform distribution of electrical charges leading to a dipole. LCs are widely used in displays of computers and other electronic devices. The rapid obsolescence rate of electronics results in large amounts of liquid crystal displays (LCDs) entering the environment. Data on health effects of LCs on living creatures are currently limited to some acute toxicity tests by a few major LC manufacturers. These tests concluded that the vast majority of LCs are not acutely toxic. Since the amount of LCs in electronic devices is very small, the health effects of LCs at low concentrations or doses become important. Catfish were used as the test animals in this study. Four major enzymes of the fish’s antioxidant defense system catalase (CAT), superoxide dismutase (SOD), selenium-dependent glutathione peroxidase (Se-GPx), and glutathione-S-transferase (GST) were chosen as biomarkers to examine effects of LCs, which were taken from obsolete laptop personal computers made in the early 1990s. The catfish were fed with food containing different contents of LCs for 40 days. Activities of the four chosen enzymes in fish livers were assayed. The results showed that there were significant inductions of CAT, SOD, and Se-GPx activities in response to the LC doses. The plots of the enzyme activities versus LC doses suggested an occurrence of oxidative stress when the dose reached about 20 μg LC/g fish·d. It was concluded that LCs can cause pollutant-induced stress to catfish at low doses. CAT, SOD and Se-GPx are effective biomarkers to give early warning on potential health effects of LCs on some aquatic lives including catfish. PMID:18678923

  6. Efficacy of hydrogen peroxide to control saprolegniasis on channel catfish (Ictalurus punctatus) eggs

    USGS Publications Warehouse

    Rach, J.J.; Valentine, J.J.; Schreier, T.M.; Gaikowski, M.P.; Crawford, T.G.

    2004-01-01

    The efficacy of hydrogen peroxide to control mortality associated with saprolegniasis in channel catfish (Ictalurus punctatus) eggs was evaluated at the Lost Valley State Fish Hatchery (Warsaw, MO). Two efficacy trials were conducted. In Trial 1, channel catfish eggs in their natural gelatinous matrix were treated with hydrogen peroxide at 0, 500, and 750 mg l(-1). Channel catfish eggs in Trial 2 had the gelatinous matrix removed before treatment with hydrogen peroxide at 0 and 500 mg l(-1). Each treatment regimen was tested in triplicate and each egg jar contained similar to 17,400 eggs. Hydrogen peroxide was administered as a 15-min flow-through treatment applied once daily for a total of six applications. Control jars were similarly treated with culture water. Samples of exposure water were collected during each treatment and analyzed to verify actual treatment concentrations. Hydrogen peroxide treatment efficacy was assessed by comparing the percent egg hatch in the treatment group to the untreated control group in each trial. Mean percent hatch in Trial I was 44% (control), 54% (500 mg l(-1)), and 69% (750 mg l(-1)). Hydrogen peroxide treatment at either 500 or 750 mg l(-1) significantly (P<0.01) increased the percent hatch compared to the untreated control group. In Trial 2, hydrogen peroxide treatment at 500 mg l(-1) significantly (P<0.01) increased the percent egg hatch (67%) relative to the untreated controls (57%). Hydrogen peroxide treatment reduced egg mortality and increased the percent hatch of channel catfish eggs regardless of whether eggs were incubated in the gelatinous matrix or without the matrix in comparison to the untreated control. (C) 2004 Elsevier B.V. All rights reserved.

  7. Precision of channel catfish catch estimates using hoop nets in larger Oklahoma reservoirs

    USGS Publications Warehouse

    Stewart, David R.; Long, James M.

    2012-01-01

    Hoop nets are rapidly becoming the preferred gear type used to sample channel catfish Ictalurus punctatus, and many managers have reported that hoop nets effectively sample channel catfish in small impoundments (<200 ha). However, the utility and precision of this approach in larger impoundments have not been tested. We sought to determine how the number of tandem hoop net series affected the catch of channel catfish and the time involved in using 16 tandem hoop net series in larger impoundments (>200 ha). Hoop net series were fished once, set for 3 d; then we used Monte Carlo bootstrapping techniques that allowed us to estimate the number of net series required to achieve two levels of precision (relative standard errors [RSEs] of 15 and 25) at two levels of confidence (80% and 95%). Sixteen hoop net series were effective at obtaining an RSE of 25 with 80% and 95% confidence in all but one reservoir. Achieving an RSE of 15 was often less effective and required 18-96 hoop net series given the desired level of confidence. We estimated that an hour was needed, on average, to deploy and retrieve three hoop net series, which meant that 16 hoop net series per reservoir could be "set" and "retrieved" within a day, respectively. The estimated number of net series to achieve an RSE of 25 or 15 was positively associated with the coefficient of variation (CV) of the sample but not with reservoir surface area or relative abundance. Our results suggest that hoop nets are capable of providing reasonably precise estimates of channel catfish relative abundance and that the relationship with the CV of the sample reported herein can be used to determine the sampling effort for a desired level of precision.

  8. Characterization and development of EST-SSR markers derived from transcriptome of yellow catfish.

    PubMed

    Zhang, Jin; Ma, Wenge; Song, Xiaomin; Lin, Qiaohong; Gui, Jian-Fang; Mei, Jie

    2014-10-13

    Yellow catfish (Pelteobagrus fulvidraco) is one of the most important freshwater fish due to its delicious flesh and high nutritional value. However, lack of sufficient simple sequence repeat (SSR) markers has hampered the progress of genetic selection breeding and molecular research for yellow catfish. To this end, we aimed to develop and characterize polymorphic expressed sequence tag (EST)-SSRs from the 454 pyrosequencing transcriptome of yellow catfish. Totally, 82,794 potential EST-SSR markers were identified and distributed in the coding and non-coding regions. Di-nucleotide (53,933) is the most abundant motif type, and AC/GT, AAT/ATT, AAAT/ATTT are respective the most frequent di-, tri-, tetra-nucleotide repeats. We designed primer pairs for all of the identified EST-SSRs and randomly selected 300 of these pairs for further validation. Finally, 263 primer pairs were successfully amplified and 57 primer pairs were found to be consistently polymorphic when four populations of 48 individuals were tested. The number of alleles for the 57 loci ranged from 2 to 17, with an average of 8.23. The observed heterozygosity (HO), expected heterozygosity (HE), polymorphism information content (PIC) and fixation index (fis) values ranged from 0.04 to 1.00, 0.12 to 0.92, 0.12 to 0.91 and -0.83 to 0.93, respectively. These EST-SSR markers generated in this study could greatly facilitate future studies of genetic diversity and molecular breeding in yellow catfish.

  9. Effect of bait and gear type on channel catfish catch and turtle bycatch in a reservoir

    USGS Publications Warehouse

    Cartabiano, Evan C.; Stewart, David R.; Long, James M.

    2014-01-01

    Hoop nets have become the preferred gear choice to sample channel catfish Ictalurus punctatus but the degree of bycatch can be high, especially due to the incidental capture of aquatic turtles. While exclusion and escapement devices have been developed and evaluated, few have examined bait choice as a method to reduce turtle bycatch. The use of Zote™ soap has shown considerable promise to reduce bycatch of aquatic turtles when used with trotlines but its effectiveness in hoop nets has not been evaluated. We sought to determine the effectiveness of hoop nets baited with cheese bait or Zote™ soap and trotlines baited with shad or Zote™ soap as a way to sample channel catfish and prevent capture of aquatic turtles. We used a repeated-measures experimental design and treatment combinations were randomly assigned using a Latin-square arrangement. Eight sampling locations were systematically selected and then sampled with either hoop nets or trotlines using Zote™ soap (both gears), waste cheese (hoop nets), or cut shad (trotlines). Catch rates did not statistically differ among the gear–bait-type combinations. Size bias was evident with trotlines consistently capturing larger sized channel catfish compared to hoop nets. Results from a Monte Carlo bootstrapping procedure estimated the number of samples needed to reach predetermined levels of sampling precision to be lowest for trotlines baited with soap. Moreover, trotlines baited with soap caught no aquatic turtles, while hoop nets captured many turtles and had high mortality rates. We suggest that Zote™ soap used in combination with multiple hook sizes on trotlines may be a viable alternative to sample channel catfish and reduce bycatch of aquatic turtles.

  10. Chronic pathology and longevity of Drepanocephalus spathans infections in juvenile Channel Catfish.

    PubMed

    Griffin, Matt J; Khoo, Lester H; Steadman, James M; Ware, Cynthia; Quiniou, Sylvie M; Mischke, Charles C; Greenway, Terrence E; Wise, David J

    2014-12-01

    Drepanocephalus spathans (Digenea: Echinostomatidae) is a common parasite of the double-crested cormorant Phalacrocorax auritus. The cercariae of D. spathans have been shown infective to juvenile Channel Catfish Ictalurus punctatus. The developing metacercariae concentrate in the cranial regions, often occluding blood vessels at the base of the branchial arch, occasionally resulting in death. The purpose of this study was to determine how long metacercariae of D. spathans persist in experimentally challenged Channel Catfish. Two separate infectivity trials were conducted. In both trials, metacercariae persisted at least 49 d postinfection, although prevalence and intensity of infection decreased over time. In the first trial, juvenile catfish (1-3 g) were exposed over three consecutive days to 100, 100, and 80 cercariae/fish/d, respectively. Fish were sampled 7 d after the final exposure, and metacercariae were observed in 83.3% (five of six) of challenged fish. At 21 d postexposure, metacercariae were present in only 50% of exposed fish (three of six). No metacercaria were observed in fish sampled at 35 d, however, metacercariae were present in one of six (16.7%) fish sampled 49 and 70 d postexposure, respectively. A second challenge consisted of a 24-h pooled exposure of 500 cercariae per fish. Again, metacercariae were present in most (six of seven; 85.7%) fish at 7 d postexposure. At 21 d postexposure, metacercariae were only evident in one of seven (14.3%) sampled fish. No metacercariae were present in any fish at 35 d postchallenge, yet one of seven (14.3%) fish was positive at 49 d postchallenge. The second study was terminated at 63 d postchallenge, as all fish sampled (n = 14) were negative for metacercariae. These data suggest that cercariae of D. spathans are infective to juvenile Channel Catfish, although the infection appears short lived as metacercariae rarely persisted longer than 2 months. PMID:25250624

  11. Detection of Off-Flavor in Catfish Using a Conducting Polymer Electronic-Nose Technology

    PubMed Central

    Wilson, Alphus D.; Oberle, Charisse S.; Oberle, Daniel F.

    2013-01-01

    The Aromascan A32S conducting polymer electronic nose was evaluated for the capability of detecting the presence of off-flavor malodorous compounds in catfish meat fillets to assess meat quality for potential merchantability. Sensor array outputs indicated that the aroma profiles of good-flavor (on-flavor) and off-flavor fillets were strongly different as confirmed by a Principal Component Analysis (PCA) and a Quality Factor value (QF > 7.9) indicating a significant difference at (P < 0.05). The A32S e-nose effectively discriminated between good-flavor and off-flavor catfish at high levels of accuracy (>90%) and with relatively low rates (≤5%) of unknown or indecisive determinations in three trials. This A32S e-nose instrument also was capable of detecting the incidence of mild off-flavor in fillets at levels lower than the threshold of human olfactory detection. Potential applications of e-nose technologies for pre- and post-harvest management of production and meat-quality downgrade problems associated with catfish off-flavor are discussed. PMID:24287526

  12. Galectins in channel catfish, Ictalurus punctatus: Characterization and expression profiling in mucosal tissues.

    PubMed

    Zhou, Shun; Zhao, Honggang; Thongda, Wilawan; Zhang, Dongdong; Su, Baofeng; Yu, Dan; Peatman, Eric; Li, Chao

    2016-02-01

    Galectins, a family of β-galactoside-binding lectins with conserved CRDs, which can recognize the glycans on the surface of viruses, bacteria and protozoan parasites, are emerging as key players in many important pathological processes, including acute and chronic inflammatory diseases, autoimmunity and apoptosis. Although galectins have attracted great interest in mammals, they are still poorly-characterized in teleost. Previously, several studies have reported their high expression levels in mucosal tissues before and post infection. Given the important roles for galectins in mucosal immunity, therefore, we characterized the galectin gene family and profiled family member expression after challenge with two different Gram-negative bacterial pathogens. Here, twelve galectins genes were captured in channel catfish (Ictalurus punctatus), and phylogenetic analysis showed the strongest relationship to zebrafish and salmon, which is consistent with their phylogenetic relationships. Furthermore, the galectin genes were widely expressed in catfish tissues, while most of the galectin genes were strongly expressed in mucosal tissues (skin, gill and intestine). In addition, the expression profiles of galectins after bacterial infection varied depending on both pathogen and tissue type, suggesting that galectins may exert disparate functions or exhibit distinct tissue-selective roles in the host immune response to bacterial pathogens. Further studies are needed, however, to expand functional characterization and examine whether galectins may also play additional physiological roles in catfish immunity. PMID:26767746

  13. Establishment and characterization of a fin cell line from Indian walking catfish, Clarias batrachus (L.).

    PubMed

    Babu, V S; Nambi, K S N; Chandra, V; Ishaq Ahmed, V P; Bhonde, R; Sahul Hameed, A S

    2011-05-01

    A new cell line, Indian Catfish Fin, derived from the fin tissue of Indian walking catfish, Clarias batrachus, was established and characterized. The cell line grew well in Leibovitz's L-15 medium supplemented with 15% foetal bovine serum (FBS) and has been subcultured more than 110 times since its initiation in 2007. The cells were able to grow at a range of temperature from 28 to 37 °C with optimal growth at 28 °C. The cell line predominantly consists of fibroblast-like cells. The growth rate of fin cells increased as the FBS concentration increased from 2% to 20% at 28 °C with optimum growth at a concentration of 15% or 20% and poor growth at a concentration of 5%. The cells were found to be susceptible to fish nodavirus and IPNV-ab and infection was confirmed by cytopathic effect and reverse transcriptase-polymerase chain reaction. PCR amplification of mitochondrial 12S rRNA using primers specific to C. batrachus confirmed the catfish origin of the cell line. The cell line was characterized further by immunocytochemistry, transfection efficiency with pEGFP-N1 and cell cycle analysis by fluorescent-activated cell sorting. PMID:21401643

  14. Phylogeny of immune recognition: antigen processing/presentation in channel catfish immune responses to hemocyanins.

    PubMed

    Vallejo, A N; Miller, N W; Jørgensen, T; Clem, L W

    1990-10-15

    Studies were conducted to address the role(s) of antigen (Ag) processing/presentation in channel catfish immune responses. Vigorous and specific secondary in vitro proliferative and antibody (Ab) responses were obtained to keyhole limpet and Limulus polyphemus hemocyanins with peripheral blood leukocytes (PBL) from catfish previously primed in vivo with Ag. In addition, such antigen-specific in vitro proliferative and Ab responses were efficiently elicited by antigen-pulsed and subsequently paraformaldehyde-fixed autologous PBL used as putative antigen-presenting cells (APC) but not by APC fixed prior to Ag pulsing. Treatment of these putative APC with lysosomotropic agents, protease inhibitors, or the ionophore monensin prior to or during pulsing with Ag significantly inhibited both in vitro responses. Furthermore, the use of radiolabeled protein indicated that both untreated and inhibitor-treated PBL but not erythrocytes take up Ag; however, only untreated PBL were able to degrade Ag. Immune restriction was indicated by the use of allogeneic PBL as APC in that only strong MLRs were generated with no detectable antibodies produced in vitro. Finally, the employment of isolated leukocyte subpopulations demonstrated that both catfish B (sIg+) lymphocytes and monocytes were efficient Ag presentors. PMID:2208303

  15. Construction and characterization of a BAC library from a gynogenetic channel catfish Ictalurus punctatus

    PubMed Central

    Quiniou, Sylvie MA; Katagiri, Takayuki; Miller, Norman W; Wilson, Melanie; Wolters, William R; Waldbieser, Geoffrey C

    2003-01-01

    A bacterial artificial chromosome (BAC) library was constructed by cloning HindIII-digested high molecular weight DNA from a gynogenetic channel catfish, Ictalurus punctatus, into the vector pBeloBAC11. Approximately 53 500 clones were arrayed in 384-well plates and stored at -80°C (CCBL1), while clones from a smaller insert size fraction were stored at -80°C without arraying (CCBL2). Pulsed-field gel electrophoresis of 100 clones after NotI digestion revealed an average insert size of 165 kb for CCBL1 and 113 kb for CCBL2. Further characterization of CCBL1 demonstrated that 10% of the clones did not contain an insert. CCBL1 provides a 7.2-fold coverage of the channel catfish haploid genome. PCR-based screening demonstrated that 68 out of 74 unique loci were present in the library. This represents a 92% chance to find a unique sequence. These libraries will be useful for physical mapping of the channel catfish genome, and identification of genes controlling major traits in this economically important species. PMID:14604514

  16. Antibody response in silver catfish (Rhamdia quelen) immunized with a model antigen associated with different adjuvants.

    PubMed

    Pavan, T R; Di Domenico, J; Kirsten, K S; Nied, C O; Frandoloso, R; Kreutz, L C

    2016-07-25

    Adjuvants are essential to boost the immune response to inoculated antigen and play a central role in vaccine development. In this study, we investigated the efficacy of several adjuvants in the production of anti-bovine serum albumin (BSA) antibodies in silver catfish. Two hundred and seventy juvenile silver catfish (60-80 g) of both sexes were intraperitoneally vaccinated with BSA (200 µg/fish) alone or mixed to the following adjuvants: Freund's complete adjuvant (FCA), Freund's incomplete adjuvant (FIA), aluminum hydroxide (AlOH), Montanide, four types of cytosine-phosphate-guanine (CpG) oligodeoxynucleotides (ODNs) and three concentrations of β-glucan, and the immune enhancing property was evaluated by measuring anti-BSA antibodies in blood samples at biweekly intervals. Our results demonstrated that CpGs ODNs and β-glucan were as effective as classical adjuvants (FCA, FIA, AlOH and Montanide) in promoting anti-BSA antibodies and that the kinetics of antibody production induced by all adjuvants used in our study had a similar trend to that observed in other fish species, with a peak at 28 days post-vaccination. These results may be useful for the selection of adjuvants for vaccine formulation intended for silver catfish and for the development of vaccine and vaccination strategies to other fish species. PMID:27464022

  17. Two New Genera of Fish Blood Flukes (Digenea: Aporocotylidae) from Catfishes in the Peruvian Amazon.

    PubMed

    Orélis-Ribeiro, Raphael; Bullard, Stephen A

    2016-06-01

    Cladocaecum tomasscholzi n. gen., n. sp. infects the heart (lumen of ventricle) of driftwood catfish, Ageneiosus inermis Linnaeus, 1766 (Siluriformes: Auchenipteridae) from the Nanay River (Amazon River Basin, near Iquitos, Peru). It differs from all other aporocotylid genera by having a highly branched intestine comprising a central cecum that terminates immediately anterior to the ovary and that has numerous laterally directed diverticula. Kritsky platyrhynchi ( Guidelli, Isaac, and Pavanelli, 2002 ) n. gen., n. comb. (= Plehniella p.) is redescribed based on paratypes plus new specimens collected from the body cavity of the type host (porthole shovelnose catfish, Hemisorubim platyrhynchos Valenciennes, 1840) (Pimelodidae) from the nearby Itaya River. Kritsky differs from Sanguinicola Plehn, 1905 , Plehniella Szidat, 1951 , Nomasanguinicola Truong and Bullard, 2013 , and Cladocaecum by the combination of having a spinous anterior sucker, an intestine comprising 6 asymmetrical ceca, a lanceolate body, a straight vas deferens, an ovary with finger-like lateral projections, a small and spheroid oötype, numerous, minute, spheroid uterine eggs, and separate genital pores. An updated list of hosts, tissues infected, and geographic localities for the catfish blood flukes (9 spp.; 5 genera) is provided. This is the first report of a fish blood fluke infecting a member of Auchenipteridae and first proposal of a new genus of blood fluke (Schistosomatoidea) from South America in 64 yr. It brings the total number of Amazonian fish blood flukes to a mere 4 species.

  18. Age, growth, sexual maturity, and food of channel catfish in central Lake Oahe, 1968-69

    USGS Publications Warehouse

    Starostka, Victor J.; Nelson, William R.

    1974-01-01

    Channel catfish, Ictalurus punctatus, were collected with gill nets, trawl, and trap nets at three localities in Lake Oahe for the study of year-class strength, growth in length and weight, age composition, sexual maturity, and food. Fish were recruited to all the collection gears at age II. Relatively strong year classes were produced in 1962, 1965, and 1966. Youngest fish were captured in the upper end of the Moreau River embayment, which apparently serves as a nursery area. Growth of age 0 fish was poor probably because the growing season was short; optimum spawning temperature were not reached until mid-summer. Growth of age II and older fish reached a peak in 1963 and declined rather steadily in 1964-68. Males began to mature at age VIII, and all fish of both sexes were mature at age XI. The diet changed from zooplankton to fish as channel catfish increased in length; aquatic insects (primarily chironomid larvae and pupae) were important foods for fish of all sizes. Fish less than 300 mm long selected large zooplankters -- Leptodora kindtii and Daphnia spp -- over smaller copepods. Larger channel catfish ate principally yellow perch, Perca flavescens.

  19. Sex biased expression of ghrelin and GHSR associated with sexual size dimorphism in yellow catfish.

    PubMed

    Zhang, Jin; Ma, Wenge; He, Yan; Wu, Junjie; Dawar, Farman Ullah; Ren, Fan; Zhao, Xiaohan; Mei, Jie

    2016-03-10

    Sexual size dimorphism has been observed in many cultivable fish species including yellow catfish, in which male fish grow much faster than female fish. Ghrelin is a potent stimulator of pituitary growth hormone (GH) release and known to potentially promote food intake and body weight gain. In order to investigate the molecular mechanism of sexual size dimorphism in yellow catfish (Pelteobagrus fulvidraco), ghrelin and its functional receptor, growth hormone secretagogue receptor (GHSR) cDNAs were cloned. Real-time PCR indicated that both ghrelin and GHSR were more highly expressed in hypothalamus and gut of male fish than female. During normal larval development, expression of ghrelin and GHSR genes was significantly higher in males than in females. 17a-Methyltestosterone (MT) treatment enhanced the expression of ghrelin in female larval fish and GHSR in both sexes, whereas the expression of ghrelin in male larval fish increased in the beginning, then decreased as the treatment time prolonged. Furthermore, the expression of ghrelin and GHSR in male juvenile was significantly increased compared with female juvenile, in short and long term fasting periods, suggesting that male fish may have a better appetite than female during fasting. Our results demonstrate that sex difference in the expression of ghrelin and GHSR may be involved in sexual size dimorphism by regulating feeding and GH/IGF signaling in yellow catfish. PMID:26692148

  20. Mitochondrial genome of the shorthead catfish (Pelteobagrus eupogon): structure, phylogeny, and intraspecific variation.

    PubMed

    Wang, R-Q; Wang, D-Z; Li, C-T; Yang, X-R

    2016-01-01

    The complete 16,532-nucleotide sequence of the mitochondrial genome of the shorthead catfish (Pelteobagrus eupogon) was determined using the long and accurate polymerase chain reaction method, and compared with the mitochondrial genome sequences of 49 other catfish species belonging to the order Siluriformes. The locations of protein-coding genes and ribosomal ribonucleic acids (RNAs) were identified by comparison with known sequences of other catfishes, including P. fulvidraco and P. nitidus. The P. eupogon mitochondrial genome was composed of 13 protein-coding genes, two ribosomal RNAs, 22 transfer RNA genes, and a non-coding control region. The gene order was identical to that of other Siluriformes. Phylogenetic analyses based on mitochondrial 12S ribosomal RNA, 16S ribosomal RNA, and 13 protein-coding gene sequence data sets were carried out to further clarify the relative phylogenetic position of P. eupogon, and identify phylogenetic relationships among 24 families of Siluriformes. Phylogenetic analyses Randomized Axelerated Maximum Likelihood (RAxML) 8.0.X were congruent with a basal split of the order into Clupeiformes, Characiformes, Cypriniformes, and Siluriformes, and supported a closer relationship of P. eupogon with Amblycipitidae than Siluridae. We therefore concluded that this species appears to be closely related to the Amblycipitidae. In the phylogenetic tree, the Amblycipitidae appeared as the most basal extant lineage within the Siluriformes, while the Bagridae appeared as the sister group of Cranoglanididae and Pangasiidae. The mitochondrial genome sequence of P. eupogon has been deposited in GenBank (accession No. KJ001784). PMID:27323031

  1. Two New Genera of Fish Blood Flukes (Digenea: Aporocotylidae) from Catfishes in the Peruvian Amazon.

    PubMed

    Orélis-Ribeiro, Raphael; Bullard, Stephen A

    2016-06-01

    Cladocaecum tomasscholzi n. gen., n. sp. infects the heart (lumen of ventricle) of driftwood catfish, Ageneiosus inermis Linnaeus, 1766 (Siluriformes: Auchenipteridae) from the Nanay River (Amazon River Basin, near Iquitos, Peru). It differs from all other aporocotylid genera by having a highly branched intestine comprising a central cecum that terminates immediately anterior to the ovary and that has numerous laterally directed diverticula. Kritsky platyrhynchi ( Guidelli, Isaac, and Pavanelli, 2002 ) n. gen., n. comb. (= Plehniella p.) is redescribed based on paratypes plus new specimens collected from the body cavity of the type host (porthole shovelnose catfish, Hemisorubim platyrhynchos Valenciennes, 1840) (Pimelodidae) from the nearby Itaya River. Kritsky differs from Sanguinicola Plehn, 1905 , Plehniella Szidat, 1951 , Nomasanguinicola Truong and Bullard, 2013 , and Cladocaecum by the combination of having a spinous anterior sucker, an intestine comprising 6 asymmetrical ceca, a lanceolate body, a straight vas deferens, an ovary with finger-like lateral projections, a small and spheroid oötype, numerous, minute, spheroid uterine eggs, and separate genital pores. An updated list of hosts, tissues infected, and geographic localities for the catfish blood flukes (9 spp.; 5 genera) is provided. This is the first report of a fish blood fluke infecting a member of Auchenipteridae and first proposal of a new genus of blood fluke (Schistosomatoidea) from South America in 64 yr. It brings the total number of Amazonian fish blood flukes to a mere 4 species. PMID:26859799

  2. Modeling River Hydrologic Regime and Spawning of Migratory Catfishes in Southeastern Peruvian Amazon

    NASA Astrophysics Data System (ADS)

    Canas, C. M.; Waylen, P. R.

    2008-05-01

    Seasonal hydrologic conditions and catfish larvae production were evaluated in the Madre de Dios River in order to determine whether environmental conditions influence the reproductive activity of a group of large, commercially important catfishes, in the Southeastern Peruvian Amazon. A simple stochastic model of floods is presented to describe the influence of the natural high flow regime on observed patterns of catfish larvae release and drifting. Daily river stage records at Puerto Maldonado are related to weekly larval catches to determine the association between flood and spawning events. On the basis of hydroclimatologic characteristics of Andean- Amazon regions, available long-term historical rainfall records are employed to approximate the likely inter- annual variability of floods within this Amazon headwater basin. Major larval drift appeared associated with stages of over the 5 m, or "Biologic Hydrologic Significant Events" (BSE), which act as triggers, or a reasonable surrogates, for spawning responses of these species. The timing of BSEs, estimated from the historical rainfall records, appear to be uniformly distributed during the rain season and their inter-arrival times exponential. These observations provided the basis of the stochastic model describing the likelihood of volumes of larvae releases from the headwater region to lowland Amazon. The ecologically significant role of the hydroclimatology of this region in the complete life cycle of this important Amazon fish resource is illustrated.

  3. Quality of Antimicrobial Products Used in Striped Catfish (Pangasianodon hypophthalmus) Aquaculture in Vietnam

    PubMed Central

    Phu, Tran Minh; Phuong, Nguyen Thanh; Scippo, Marie-Louise; Dalsgaard, Anders

    2015-01-01

    Antimicrobial usage is common in Asian aquaculture. This study aimed to determine the quality of antimicrobial products used by Vietnamese striped catfish (Pangasianodon hypophthalmus) farmers. Twenty one antimicrobial products (11 products contained a single antimicrobial and 10 products contained a mixture of two different antimicrobials) commonly used by catfish farmers were obtained from so-called chemical shops located in the Mekong Delta, Vietnam. Ultra High Performance Liquid Chromatography Mass Spectrometry was used to analyze concentration of sulfonamides, trimethoprim, amoxicillin, cefalexin and ciprofloxacin whereas concentrations of florfenicol and doxycycline were analyzed by High Performance Liquid Chromatography with UV detection. Results revealed that only 4/11 products with a single antimicrobial and 2/10 products with a mixture of antimicrobials contained active substances within ±10% of the concentration declared on the product label. Two products with antimicrobial mixtures did not contain any of the declared antimicrobials. Comparing two batches, analysis of 11 products revealed that only one product contained a concentration of active compound that varied with less than 10% in both batches. Several product labels provided inadequate information on how to calculate therapeutic dosage and further stated withdrawal time despite lack of pharmacokinetic data on the antimicrobials in catfish. There is an urgent need to strengthen approval procedures and in particular regularly to monitor the quality of antimicrobials used in Vietnamese aquaculture. PMID:25897517

  4. Antibody response in silver catfish (Rhamdia quelen) immunized with a model antigen associated with different adjuvants

    PubMed Central

    Pavan, T.R.; Di Domenico, J.; Kirsten, K.S.; Nied, C.O.; Frandoloso, R.; Kreutz, L.C.

    2016-01-01

    Adjuvants are essential to boost the immune response to inoculated antigen and play a central role in vaccine development. In this study, we investigated the efficacy of several adjuvants in the production of anti-bovine serum albumin (BSA) antibodies in silver catfish. Two hundred and seventy juvenile silver catfish (60–80 g) of both sexes were intraperitoneally vaccinated with BSA (200 µg/fish) alone or mixed to the following adjuvants: Freund’s complete adjuvant (FCA), Freund’s incomplete adjuvant (FIA), aluminum hydroxide (AlOH), Montanide, four types of cytosine-phosphate-guanine (CpG) oligodeoxynucleotides (ODNs) and three concentrations of β-glucan, and the immune enhancing property was evaluated by measuring anti-BSA antibodies in blood samples at biweekly intervals. Our results demonstrated that CpGs ODNs and β-glucan were as effective as classical adjuvants (FCA, FIA, AlOH and Montanide) in promoting anti-BSA antibodies and that the kinetics of antibody production induced by all adjuvants used in our study had a similar trend to that observed in other fish species, with a peak at 28 days post-vaccination. These results may be useful for the selection of adjuvants for vaccine formulation intended for silver catfish and for the development of vaccine and vaccination strategies to other fish species. PMID:27464022

  5. Effect of anolyte on background microflora, Salmonella, and Listeria monocytogenes on catfish fillets.

    PubMed

    Rajkowski, Kathleen T; Sommers, Christopher H

    2012-04-01

    Near-neutral electrolyzed water (anolyte), having a pH of 6.0 to 6.5 ± 0.02, oxidation reduction potential of greater than 700 mV, and a residual chlorine level of 10 to 200 ppm, was reported to have a potential use to decontaminate food surfaces. An electrolyzing cell was developed that is capable of producing neutral electrolyzed water containing a chlorine level of greater than 700 ppm in the form of hypochlorous acid (anolyte). Anolyte with a chlorine level of 300 ppm was used to determine its effect on Salmonella and Listeria monocytogenes cells after a 3-min contact. Transmission electron micrograph results showed disruption of the outer cellular membrane for both bacteria. The anolyte (300 ppm) was used as a washing solution to decontaminate catfish fillets inoculated with either Salmonella or L. monocytogenes. After a 3-min contact time with the anolyte, there was a 1-log reduction for Salmonella, and after 8 days of refrigerated storage (4°C), this bacterial reduction was maintained. There was no reduction of L. monocytogenes on the catfish fillet surfaces. The anolyte was an effective wash solution for Salmonella reduction on the catfish fillet surfaces.

  6. Estimating the oral bioavailability of methylmercury to channel catfish (Ictalurus punctatus)

    SciTech Connect

    McCloskey, J.T.; Schultz, I.R.; Newman, M.C.

    1998-08-01

    In classical pharmacology, oral bioavailability of a toxicant is defined as that fraction of an orally administered dose reaching the systemic circulation of the animal. The present study estimates the bioavailability of methylmercury in channel catfish (Ictalurus punctatus) by comparing concentrations in the blood through time after oral and intra-arterial (IA) administration. Catfish were cannulated in the dorsal aorta and gavaged a pelleted feed that has been spiked with methylmercury. Each catfish was gavaged an increasing amount of spiked feed. Following oral dosing, serial blood samples were removed for more than 1,500 h. One month after removal of the last blood sample, the same fish were injected IA with methylmercury and serial blood samples were removed for more than 3,000 h. The area under the curve of the blood concentration-time curve extrapolated to infinity (AUC{sub 0{r_arrow}x}) was calculated from fish dosed orally and IA using both noncompartmental (trapezoidal) and compartmental methods. Bioavailability was estimated as the ratio of the dose-corrected oral AUC{sub 0{r_arrow}x} to the IA AUC{sub 0{r_arrow}x}. Average bioavailability estimates from this approach were 33% using noncompartmental methods and were correlated with the amount of food gavaged to the fish. Bioavailability estimates using the present methods were much lower than estimates using more conventional methods suggesting that conventional methods may overestimate the true bioavailability of toxicants in fish.

  7. Effects of dietary arginine on endocrine growth factors of channel catfish, Ictalurus punctatus.

    PubMed

    Pohlenz, Camilo; Buentello, Alejandro; Miller, Thomas; Small, Brian C; MacKenzie, Duncan S; Gatlin, Delbert M

    2013-10-01

    Thyroid (TH) and growth (GH) hormones, and insulin-like growth factor I (IGF-I) are anabolic regulators in fish and responsive to nutrient intake. A study was conducted to determine if previously reported growth effects of dietary arginine (ARG) in channel catfish were related to the activation of endocrine axes. In a first experiment, catfish were fed incremental levels of ARG (0.5 - 4% of diet) for 6 weeks and sampled at 2-week intervals. In a second experiment, fasted (48h) fish were fed a single ration of ARG (0.5 or 4% of diet) and sampled at various intervals (0 to 72h postprandial, PP). Experiment 1 did not reveal any influence of ARG on circulating TH, GH, or IGF-I despite the significantly increased growth of fish fed ARG-enriched diets. In experiment 2, feeding the 4% ARG diet significantly increased the amplitude of pulsatile plasma GH levels and also significantly increased IGF-I mRNA in liver and muscle, (at 2h PP) and plasma IGF-I levels (at 6h PP). Although relatively infrequent sampling failed to reveal alterations in TH or GH levels in response to ARG-induced growth activation, PP high frequency sampling unveiled high amplitude pulsatile GH secretions and may be important in activating IGF production in target tissues. Additionally, expressed and secreted IGF-I exhibited discernible patterns which closely correlate with ARG-induced growth effects in catfish.

  8. Expression profiles of seven channel catfish antimicrobial peptides in response to Edwardsiella ictaluri infection.

    PubMed

    Pridgeon, J W; Mu, X; Klesius, P H

    2012-03-01

    Using quantitative polymerase chain reaction (QPCR), the relative transcriptional levels of seven channel catfish antimicrobial peptide (AMP) genes (NK-lysin type 1, NK-lysin type 2, NK-lysin type 3, bactericidal permeability-increasing protein, cathepsin D, hepcidin and liver-expressed AMP 2) in response to Edwardsiella ictaluri infection were determined. None of the AMP genes tested was significantly upregulated at 2 h post-infection. Hepcidin was the only one that was significantly (P<0.05) upregulated at 4, 6 and 12 h post-infection. At 24 and 48 h post-infection, four AMPs (hepcidin, NK-lysin type 1, NK-lysin type 3 and cathepsin D) were significantly (P<0.05) upregulated. Among all the AMPs that were significantly upregulated at different time points, hepcidin at 4, 6 and 12 h post-infection was upregulated the most. When catfish were injected with different doses of E. ictaluri, all lethal doses were able to induce significant (P <0.05) upregulation of hepcidin in the posterior kidney, whereas sublethal doses failed to induce any significant upregulation of hepcidin. In vitro growth studies revealed that the presence of synthetic hepcidin peptide at a concentration of 16 μm or higher significantly inhibited the cell proliferation of E. ictaluri. Taken together, our results suggest that hepcidin might play an important role in the channel catfish defence against E. ictaluri infection.

  9. Acute toxicity of nitrofurazone to channel catfish Ictalurus punctatus, and goldfish, Carassius auratus

    SciTech Connect

    Wise, M.L.; Stiebel, C.L.; Grizzle, J.M.

    1987-01-01

    Nitrofurazone (5-nitro-2-furaldehyde semicarbazone) is a nitrofuran, a group of organic compounds which have inhibitory activity against many Gram-negative and Gram-positive bacteria and against some protozoan parasites. Although not approved by the United States Food and Drug Administration for use with food fish, nitrofurazone has been found effective in fish against external and internal infections by various species of Aeromonas, Pseudomonas and myxobacteria and can be administered either as a food additive or as a bath treatment. Attempts to control the microsporidian parasite Pleistophora ovariae in golden shiners, Notemigonus crysoleucas, with nitrofurazone met with equivocal results. The following experiment was performed to determine acute toxicity, including lesions, of nitrofurazone to channel catfish, Ictalurus punctatus, and goldfish, carassius auratus, fingerlings. Toxicity of nitrofurazone to channel catfish was determined with low dissolved oxygen concentrations (2 mg/L) to simulate conditions frequently encountered in channel catfish culture. Information abut toxic levels of drugs and the lesions occurring in exposed fish is important to determine the safety of treatment levels and the effects of toxic concentrations.

  10. Quality of Antimicrobial Products Used in Striped Catfish (Pangasianodon hypophthalmus) Aquaculture in Vietnam.

    PubMed

    Phu, Tran Minh; Phuong, Nguyen Thanh; Scippo, Marie-Louise; Dalsgaard, Anders

    2015-01-01

    Antimicrobial usage is common in Asian aquaculture. This study aimed to determine the quality of antimicrobial products used by Vietnamese striped catfish (Pangasianodon hypophthalmus) farmers. Twenty one antimicrobial products (11 products contained a single antimicrobial and 10 products contained a mixture of two different antimicrobials) commonly used by catfish farmers were obtained from so-called chemical shops located in the Mekong Delta, Vietnam. Ultra High Performance Liquid Chromatography Mass Spectrometry was used to analyze concentration of sulfonamides, trimethoprim, amoxicillin, cefalexin and ciprofloxacin whereas concentrations of florfenicol and doxycycline were analyzed by High Performance Liquid Chromatography with UV detection. Results revealed that only 4/11 products with a single antimicrobial and 2/10 products with a mixture of antimicrobials contained active substances within ±10% of the concentration declared on the product label. Two products with antimicrobial mixtures did not contain any of the declared antimicrobials. Comparing two batches, analysis of 11 products revealed that only one product contained a concentration of active compound that varied with less than 10% in both batches. Several product labels provided inadequate information on how to calculate therapeutic dosage and further stated withdrawal time despite lack of pharmacokinetic data on the antimicrobials in catfish. There is an urgent need to strengthen approval procedures and in particular regularly to monitor the quality of antimicrobials used in Vietnamese aquaculture. PMID:25897517

  11. Quality of Antimicrobial Products Used in Striped Catfish (Pangasianodon hypophthalmus) Aquaculture in Vietnam.

    PubMed

    Phu, Tran Minh; Phuong, Nguyen Thanh; Scippo, Marie-Louise; Dalsgaard, Anders

    2015-01-01

    Antimicrobial usage is common in Asian aquaculture. This study aimed to determine the quality of antimicrobial products used by Vietnamese striped catfish (Pangasianodon hypophthalmus) farmers. Twenty one antimicrobial products (11 products contained a single antimicrobial and 10 products contained a mixture of two different antimicrobials) commonly used by catfish farmers were obtained from so-called chemical shops located in the Mekong Delta, Vietnam. Ultra High Performance Liquid Chromatography Mass Spectrometry was used to analyze concentration of sulfonamides, trimethoprim, amoxicillin, cefalexin and ciprofloxacin whereas concentrations of florfenicol and doxycycline were analyzed by High Performance Liquid Chromatography with UV detection. Results revealed that only 4/11 products with a single antimicrobial and 2/10 products with a mixture of antimicrobials contained active substances within ±10% of the concentration declared on the product label. Two products with antimicrobial mixtures did not contain any of the declared antimicrobials. Comparing two batches, analysis of 11 products revealed that only one product contained a concentration of active compound that varied with less than 10% in both batches. Several product labels provided inadequate information on how to calculate therapeutic dosage and further stated withdrawal time despite lack of pharmacokinetic data on the antimicrobials in catfish. There is an urgent need to strengthen approval procedures and in particular regularly to monitor the quality of antimicrobials used in Vietnamese aquaculture.

  12. Antibiotic Application and Emergence of Multiple Antibiotic Resistance (MAR) in Global Catfish Aquaculture.

    PubMed

    Chuah, Li-Oon; Effarizah, M E; Goni, Abatcha Mustapha; Rusul, Gulam

    2016-06-01

    Catfish is one of the most cultivated species worldwide. Antibiotics are usually used in catfish farming as therapeutic and prophylactic agents. In the USA, only oxytetracycline, a combination of sulfadimethoxine and ormetoprim, and florfenicol are approved by the Food Drug Administration for specific fish species (e.g., catfish and salmonids) and their specific diseases. Misuse of antibiotics as prophylactic agents in disease prevention, however, is common and contributes in the development of antibiotic resistance. Various studies had reported on antibiotic residues and/or resistance in farmed species, feral fish, water column, sediments, and, in a lesser content, among farm workers. Ninety percent of the world aquaculture production is carried out in developing countries, which lack regulations and enforcement on the use of antibiotics. Hence, efforts are needed to promote the development and enforcement of such a regulatory structure. Alternatives to antibiotics such as antibacterial vaccines, bacteriophages and their lysins, and probiotics have been applied to curtail the increasing emergence of antibiotic-resistant bacteria due to the imprudent application of antibiotics in aquaculture.

  13. Rapid loss of lampricide from catfish and rainbow trout following routine treatment

    USGS Publications Warehouse

    Dawson, V.K.; Schreier, T.M.; Boogaard, M.A.; Spanjers, N.J.; Gingerich, W.H.

    2002-01-01

    Rainbow trout (Oncorhynchus mykiss) and channel catfish (Ictalurus punctatus) were exposed to 3-trifluoromethyl-4-nitrophenol (TFM) and Bayluscide (niclosamide) during a sea lamprey control treatment of the Ford River, located in the upper peninsula of Michigan. Caged fish were exposed to a nominal concentration of 0.02 mg/L of niclosamide for a period of approximately 12 h. Samples of fillet tissue were collected from each fish species before treatment and at 6, 12, 18, 24, 48, 96, and 192 h following the arrival of the block of chemical at the exposure site. The fish were dissected, homogenized, extracted, and analyzed by high-performance liquid chromatography. The major residues found in the fillet tissues were TFM and niclosamide. Niclosamide concentrations were highest 12 h after arrival of the chemical block for rainbow trout (0.0395 ?? 0.0251 ??g/g) and 18 h after arrival of the chemical block for channel catfish (0.0465 ?? 0.0212 ??g/g). Residues decreased rapidly after the block of lampricide had passed and were below the detection limits in fillets of rainbow trout within 24 h and channel catfish within 96 h after the arrival of the lampricide.

  14. Late Miocene calcareous nannofossil genus Catinaster: taxonomy, evolution and magnetobiochronology

    USGS Publications Warehouse

    Peleo-Alampay, A.; Bukry, D.; Liu, L.; Young, J.R.

    1998-01-01

    A systematic study on the evolution and stratigraphic distribution of the species of Catinaster from several DSDP/ODP sites with magnetostratigraphic records is presented. The evolution of Catinaster from Discoaster is established by documentation of a transitional nannofossil species, Dicoaster transitus. Two new subspecies, Catinaster coalitus extensus and Catinaster calyculus rectus are defined which appear to be intermediates in the evolution of Catinaster coalitus coalitus to Catinaster calyculus calyculus. The first occurrence of C. coalitus is shown to be in the lower part of C5n.2n at 10.7-10.9 Ma in the low to mid-latitude Atlantic and Pacific oceans. The last occurrence of C. coalitus coalitus varies from the upper part of C5n.2n to the lower portion of C4A. Magnetobiostratigraphic evidence suggests that the FO of C. calyculus rectus is diachronous. Catinaster mexicanus occurs in the late Miocene and has been found only in the eastern equatorial Pacific, the Indian Ocean and the Gulf of Mexico.

  15. Hydrologic cycling over Antarctica during the middle Miocene warming

    NASA Astrophysics Data System (ADS)

    Feakins, Sarah J.; Warny, Sophie; Lee, Jung-Eun

    2012-08-01

    From 20 to 15 million years (Myr) ago, a period of global warmth reversed the previous ice growth on Antarctica, leading to the retreat of the West Antarctic Ice Sheet and the contraction of the East Antarctic Ice Sheet. Pollen recovered from the Antarctic shelf indicates the presence of substantial vegetation on the margins of Antarctica 15.7Myr ago. However, the hydrologic regime that supported this vegetation is unclear. Here we combine leaf-wax hydrogen isotopes and pollen assemblages from Ross Sea sediments with model simulations to reconstruct vegetation, precipitation and temperature in Antarctica during the middle Miocene. Average leaf-wax stable hydrogen isotope (δD) values from 20 to 15.5Myr ago translate to average δD values of -50‰ for precipitation at the margins of Antarctica, higher than modern values. We find that vegetation persisted from 20 to 15.5Myr ago, with peak expansions 16.4 and 15.7Myr ago coinciding with peak global warmth and vegetation growth. Our model experiments are consistent with a local moisture source in the Southern Ocean. Combining proxy measurements with climate simulations, we conclude that summer temperatures were about 11°C warmer than today, and that there was a substantial increase in moisture delivery to the Antarctic coast.

  16. Late Miocene exhumation and uplift of the Washington Cascade Range

    NASA Astrophysics Data System (ADS)

    Reiners, Peter W.; Ehlers, Todd A.; Garver, John I.; Gran Mitchell, Sara; Montgomery, David R.; Vance, Joseph A.; Nicolescu, Stefan

    2002-09-01

    The Washington Cascade Range is a complex, polygenetic mountain range that dominates the topographic, climatic, and cultural configurations of Washington State. Although it has been the locus of ongoing arc magmatism since the Eocene, most of the range is distinct from the southern part of the arc in Oregon and California in that bedrock uplift has produced high surface elevations and topographic relief, rather than volcanic burial or edifice construction. (U-Th)/He and fission-track ages of bedrock samples on the east flank of the range record relatively rapid cooling in the early Tertiary, but slow exhumation rates (˜0.2 km/m.y.) through most of the Oligocene. Samples on the west flank suggest rapid cooling in the late Miocene (8 12 Ma), and age variations in vertical transects are consistent with a pulse of rapid exhumation (0.5 1.0 km/m.y.) at that time. Apatite He ages as young as 1 5 Ma in several areas suggest that high cooling and possibly exhumation rates persist locally. Accelerated exhumation rates ca. 10 Ma are also observed in the Coast Mountains of British Columbia and southeast Alaska, ˜1500 km to the north, suggesting a large-scale mechanism for the exhumation pulse at that time.

  17. Miocene detachment faulting predating EPR propagation: Southern Baja California

    NASA Astrophysics Data System (ADS)

    Bot, Anna; Geoffroy, Laurent; Authemayou, Christine; Bellon, Hervé; Graindorge, David; Pik, Raphaël.

    2016-05-01

    At the southern tip of the Baja California peninsula, we characterize the onshore structures and kinematics associated with crustal necking leading up to the Pliocene breakup and early East Pacific Rise seafloor spreading. From a combination of tectonic field investigations, K-Ar and cosmogenic isotope dating and geomorphology, we propose that the Los Cabos block represents the exhumed footwall of a major detachment fault. This north trending detachment fault is marked by a conspicuous low-dipping brittle-ductile shear zone showing a finite displacement with top to the SE ending to the ESE. This major feature is associated with fluid circulations which led to rejuvenation of the deformed Cretaceous magmatic rocks at a maximum of 17.5 Ma. The detachment footwall displays kilometer-scale corrugations controlling the present-day drainage pattern. This major detachment is synchronous with the development of the San José del Cabo Basin where syntectonic sedimentation took place from the middle Miocene to probably the early Pliocene. We propose that this seaward dipping detachment fault accommodates the proximal crustal necking of the Baja California passive margin, which predates the onset of formation of the East Pacific Rise spreading axis in the Cabo-Puerto Vallarta segment. Our data illustrate an apparent anticlockwise rotation of the stretching direction in Baja California Sur from ~17 Ma to the Pliocene.

  18. Miocene reef facies of Pelagian Block, central Mediterranean

    SciTech Connect

    Pedley, H.M.

    1988-01-01

    Miocene reefs outcrop in the Maltese Islands, southeastern Sicily, and the pelagian island of Lampedusa. Several rapid eustatic sea level fluctuations affected these late Tortonian-early Messinian build-ups; normal salinities appear to have been maintained during these events. Substrate, topography, sedimentation rate, and tectonic/eustatic events controlled reef development, which can be grouped into three settings: The most stable situation, the oldest Maltese and southeastern Sicilian reefs, has a ramp profile 15-30 km wide. The outermost zone consists of a broad belt of the large benthic foraminifer Heterostegina (compared with the underyling Oligocene beds rich in Lepidocyclina). Coralline algal carbonates, commonly rhodolitic, form a broad biostromal up-ramp association, kilometers in width, which commonly extends into the shallowest parts of the shelf. Scattered across the shallower ramp areas, in water depths generally less than 10 m, are coral-algal patch reefs, rarely larger than 20-50 m in diameter, commonly with truncated tops, and dominated by crustose coralline algae and the corals Porites and Tarbellastraea.

  19. Porosity evolution of upper Miocene reefs, Almeria Province, Southern Spain

    SciTech Connect

    Armstrong, A.K.; Snavely, P.D. Jr.; Addicott, W.O.

    1980-02-01

    In the reef cores and fore-reef breccia beds, porosity in both primary and postdepositional. Primary porosity is of three types: (a) boring clam holes in the scleractinian coral heads, cemented reef rocks, and breccias; (b) intraparticle porosity within the corals, Halimeda plates, and vermetid worm tubes; and (c) interparticle porosity between bioclastic fragments and in the reef breccia. Postdepositional moldic porosity was formed by the solution of aragonitic material such as molluscan and coral fragments. The Polomo reef carbonate rocks have high porosity and permeability, and retain a great amount of depositional porosity. Pores range in size from a few micrometers to 30 cm. The extensive intercrystalline porosity and high permeability resulted from dolomitization of micritic matrix. Some porosity reduction has occured by incomplete and partial sparry calcite infilling of interparticular, moldic, and intercrystalline voids. The high porosity and permeability of these reefs make them important targets for petroleum exploration in the western Mediterranean off southern Spain. In these offshore areas in the subsuface the volcanic ridge and the Plomo reef complex are locally onlapped or overlapped by 350 m or more of Miocene and Pliocene fine-grained sedimentary rocks. The possibility exists that the buried Plomo reef deposits may form traps for oil and gas in the offshore areas southwest of the type locality. Stratigraphic traps also may occur where the Neogene sequence above the Plomo reef complex onlaps the volcanic ridge. 17 figures.

  20. Resource partitioning among top predators in a Miocene food web.

    PubMed

    Domingo, M Soledad; Domingo, Laura; Badgley, Catherine; Sanisidro, Oscar; Morales, Jorge

    2013-01-01

    The exceptional fossil sites of Cerro de los Batallones (Madrid Basin, Spain) contain abundant remains of Late Miocene mammals. From these fossil assemblages, we have inferred diet, resource partitioning and habitat of three sympatric carnivorous mammals based on stable isotopes. The carnivorans include three apex predators: two sabre-toothed cats (Felidae) and a bear dog (Amphicyonidae). Herbivore and carnivore carbon isotope (δ(13)C) values from tooth enamel imply the presence of a woodland ecosystem dominated by C(3) plants. δ(13)C values and mixing-model analyses suggest that the two sabre-toothed cats, one the size of a leopard and the other the size of a tiger, consumed herbivores with similar δ(13)C values from a more wooded portion of the ecosystem. The two sabre-toothed cats probably hunted prey of different body sizes, and the smaller species could have used tree cover to avoid encounters with the larger felid. For the bear dog, δ(13)C values are higher and differ significantly from those of the sabre-toothed cats, suggesting a diet that includes prey from more open woodland. Coexistence of the sabre-toothed cats and the bear dog was likely facilitated by prey capture in different portions of the habitat. This study demonstrates the utility of stable isotope analysis for investigating the behaviour and ecology of members of past carnivoran guilds.

  1. Peatmoss (Sphagnum) diversification associated with Miocene Northern Hemisphere climatic cooling?

    PubMed

    Shaw, A Jonathan; Devos, Nicolas; Cox, Cymon J; Boles, Sandra B; Shaw, Blanka; Buchanan, Alex M; Cave, Lynette; Seppelt, Rodney

    2010-06-01

    Global climate changes sometimes spark biological radiations that can feed back to effect significant ecological impacts. Northern Hemisphere peatlands dominated by living and dead peatmosses (Sphagnum) harbor almost 30% of the global soil carbon pool and have functioned as a net carbon sink throughout the Holocene, and probably since the late Tertiary. Before that time, northern latitudes were dominated by tropical and temperate plant groups and ecosystems. Phylogenetic analyses of mosses (phylum Bryophyta) based on nucleotide sequences from the plastid, mitochondrial, and nuclear genomes indicate that most species of Sphagnum are of recent origin (ca. <20 Ma). Sphagnum species are not only well-adapted to boreal peatlands, they create the conditions that promote development of peatlands. The recent radiation that gave rise to extant diversity of peatmosses is temporally associated with Miocene climatic cooling in the Northern Hemisphere. The evolution of Sphagnum has had profound influences on global biogeochemistry because of the unique biochemical, physiological, and morphological features of these plants, both while alive and after death.

  2. Late Oligocene-early Miocene birth of the Taklimakan Desert.

    PubMed

    Zheng, Hongbo; Wei, Xiaochun; Tada, Ryuji; Clift, Peter D; Wang, Bin; Jourdan, Fred; Wang, Ping; He, Mengying

    2015-06-23

    As the world's second largest sand sea and one of the most important dust sources to the global aerosol system, the formation of the Taklimakan Desert marks a major environmental event in central Asia during the Cenozoic. Determining when and how the desert formed holds the key to better understanding the tectonic-climatic linkage in this critical region. However, the age of the Taklimakan remains controversial, with the dominant view being from ∼ 3.4 Ma to ∼ 7 Ma based on magnetostratigraphy of sedimentary sequences within and along the margins of the desert. In this study, we applied radioisotopic methods to precisely date a volcanic tuff preserved in the stratigraphy. We constrained the initial desertification to be late Oligocene to early Miocene, between ∼ 26.7 Ma and 22.6 Ma. We suggest that the Taklimakan Desert was formed as a response to a combination of widespread regional aridification and increased erosion in the surrounding mountain fronts, both of which are closely linked to the tectonic uplift of the Tibetan-Pamir Plateau and Tian Shan, which had reached a climatically sensitive threshold at this time.

  3. Resource partitioning among top predators in a Miocene food web

    PubMed Central

    Domingo, M. Soledad; Domingo, Laura; Badgley, Catherine; Sanisidro, Oscar; Morales, Jorge

    2013-01-01

    The exceptional fossil sites of Cerro de los Batallones (Madrid Basin, Spain) contain abundant remains of Late Miocene mammals. From these fossil assemblages, we have inferred diet, resource partitioning and habitat of three sympatric carnivorous mammals based on stable isotopes. The carnivorans include three apex predators: two sabre-toothed cats (Felidae) and a bear dog (Amphicyonidae). Herbivore and carnivore carbon isotope (δ13C) values from tooth enamel imply the presence of a woodland ecosystem dominated by C3 plants. δ13C values and mixing-model analyses suggest that the two sabre-toothed cats, one the size of a leopard and the other the size of a tiger, consumed herbivores with similar δ13C values from a more wooded portion of the ecosystem. The two sabre-toothed cats probably hunted prey of different body sizes, and the smaller species could have used tree cover to avoid encounters with the larger felid. For the bear dog, δ13C values are higher and differ significantly from those of the sabre-toothed cats, suggesting a diet that includes prey from more open woodland. Coexistence of the sabre-toothed cats and the bear dog was likely facilitated by prey capture in different portions of the habitat. This study demonstrates the utility of stable isotope analysis for investigating the behaviour and ecology of members of past carnivoran guilds. PMID:23135673

  4. Late Oligocene–early Miocene birth of the Taklimakan Desert

    PubMed Central

    Zheng, Hongbo; Wei, Xiaochun; Tada, Ryuji; Clift, Peter D.; Wang, Bin; Jourdan, Fred; Wang, Ping; He, Mengying

    2015-01-01

    As the world’s second largest sand sea and one of the most important dust sources to the global aerosol system, the formation of the Taklimakan Desert marks a major environmental event in central Asia during the Cenozoic. Determining when and how the desert formed holds the key to better understanding the tectonic–climatic linkage in this critical region. However, the age of the Taklimakan remains controversial, with the dominant view being from ∼3.4 Ma to ∼7 Ma based on magnetostratigraphy of sedimentary sequences within and along the margins of the desert. In this study, we applied radioisotopic methods to precisely date a volcanic tuff preserved in the stratigraphy. We constrained the initial desertification to be late Oligocene to early Miocene, between ∼26.7 Ma and 22.6 Ma. We suggest that the Taklimakan Desert was formed as a response to a combination of widespread regional aridification and increased erosion in the surrounding mountain fronts, both of which are closely linked to the tectonic uplift of the Tibetan–Pamir Plateau and Tian Shan, which had reached a climatically sensitive threshold at this time. PMID:26056281

  5. Paleointensity determinations from Middle Miocene volcanic rocks, Far East, Russia

    NASA Astrophysics Data System (ADS)

    Shcherbakov, Valeriy; Shcherbakova, Valentina; Zhidkov, Grigoriy; Bretstein, Yury

    2010-05-01

    Paleomagnetic and paleointensity studies of a representative collection of Middle Miocene volcanic rocks of (12.4-10.0) Ma age from Far East, Russia were carried out. A comprehensive rock magnetic investigation has been performed in order to determine the mineralogy of magnetic fraction and to identify the origin of NRM. Successful Thellier palaeointensity determinations with pTRM checks were obtained for 4 sites (33 samples). The Thellier experiments were complimented by the Wilson's express method. Values of the VDMs range from 3.1 to 7.5 (10^22 Am^2) with the mean VDM = 5.5×10^22 Am^2. A total 88 Thellier-type palaeointensity determinations were found in the World Paleointensity database for the 5-23 Ma period with the overall mean VDM = 5×10^22 Am^2. The VDM distribution is characterized by high variance from 1.5 to 12 (10^22 Am^2). No significant difference between the VDM distributions for the normal and reverse polarity intervals was revealed.

  6. Miocene drowning of temperate (Foramol) carbonate platform: upper Miami Terrace

    SciTech Connect

    Carannante, G.; Simone, L.; Neumann, C.

    1986-05-01

    Oligocene neritic rocks dredged from 350 m on the upper Miami Terrace exhibit repeated phosphatization as well as a filled void system containing post-Burdigalian foraminifera. During drowning, a neritic hardground was subjected to both pelagic deposition (infills) and repeated marine exposure (borings, P-coatings, etc). The neritic grainstone-packstone contains large benthic foraminifera, red algae, bryozoans, pelecypods, ahermatypic corals, echinoids, and some planktonic foraminifera. This composition association is the Foramol type characteristic of temperate to subtropical neritic environments such as the present Mediterranean, Brazilian, and New Zealand shelves. These temperate sediments derive from the local biocoenose, and accumulate slowly in deep sheets of loose skeletal debris. They become relict seaward where they are often bored, corroded, stained, glauconitized, and cemented into hardgrounds. Locally, hemipelagic cover might produce a palimpsest sequence. Recent Foramol-type platforms are undergoing drowning. The Miami Terrace is compared to very similar Miocene Foramol-type platforms now exposed in the southern Apennines. Both are characterized by neritic sequences passing upward into hemipelagics, via a palimpsest interval marked by glauconitic, phosphatic, iron-stained grains often mineralized into hardgrounds. The drowning of the Miami Terrace hence coincided with and, the authors suppose, was a result of the shift from a rapid, oligotrophic, tropical accumulation to a slow, temperate, eutrophic carbonate accumulation caused in turn by a temporary paleo-oceanographic shift to cooler, richer, neritic conditions within the history of this now subtropical setting.

  7. Miocene tephrochronology in the northern Basin and Range

    SciTech Connect

    Perkins, M.E.; Brown, F.H.; Nash, W.P. . Dept. of Geology and Geophysics)

    1993-04-01

    Silicic air-fall tephra layers with unaltered glass shards preserved in Miocene basins of the northern Basin and Range Province (NBR) were sampled from well-exposed sections in the Goose Creek (GCB) and Ibapah (IB) basins in the northeastern NBR, and the El Pasco basin (EPB) in the southwestern NBR. Each basin may contain up to 50 tephras. Glass shards from individual tephras in any one basin are compositionally distinct, as shown by XRF and electron microprobe analysis. Seventeen tephra correlate between two or more basins; 12 of these are regionally important, providing precise stratigraphic ties across the NbR. Four regionally correlative tephras are white biotitic ashes from southern Nevada sources, whereas eight are gray vitric ashes from Yellowstone hot spot sources. Dates on tephra layers and lava flows in the basins, and on ashflow units correlated with four other tephra provide a preliminary chronology for the tephra in the all basins. In each section [Delta]h/[Delta]t appears constant on time scales [>=]1 Ma, but variation in [Delta]h/[Delta]t is demonstrated from IB, and is likely typical of all basins. Sedimentation in all five basins begins in the time interval of 14.5--12.5 Ma, which may represent the beginning of a phase of regional extension in the NBR. Post-[approximately]9.5 Ma deformation has affected all basins and likely contributed to the termination of sedimentation in the exposed areas of these basins.

  8. In vitro evaluation of the antimicrobial agent AquaFrin(TM) as a bactericide and selective algicide for use in channel catfish (Ictalurus punctatus) aquaculture

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Producers of pond-raised channel catfish in the southeastern United States can experience huge economic losses due to the bacterial diseases enteric septicemia of catfish (ESC) and columnaris and to the presence of the certain odor-producing cyanobacteria in production ponds that result in “off-flav...

  9. Cocaine- and Amphetamine-Regulated Transcript (CART) Messenger RNA Expression is Regulated by Food Intake in the Brain of the Channel Catfish (Ictalurus punctatus)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Increased growth is included as a selection criterion at the USDA Catfish Genetics Research Unit, Stoneville, MS, USA. Faster growth of selected channel catfish is typically attributed to their ability to consume more feed. While endocrine and neural factors and mechanisms that regulate feed intak...

  10. Evaluation of a loop-mediated isothermal amplification method for rapid detection of channel catfish Ictalurus punctatus important bacterial pathogen Edwardsiella ictaluri.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Channel catfish Ictalurus punctatus infected with Edwardsiella ictaluri results in $40 - 50 million annual losses in profits to catfish producers. Early detection of this pathogen is necessary for disease control and reduction of economic loss. In this communication, the loop-mediated isothermal a...

  11. Missing the target: DNAk is a dominant epitope in the humoral immune response of channel catfish (Ictalurus punctatus) to Flavobacterium columnare

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Vaccination remains a viable alternative for bacterial disease protection in fish; however additional work is required to understand the mechanisms of adaptive immunity in the channel catfish. To assess the humoral immune response to Flavobacterium columnare; a group of channel catfish were first im...

  12. Comparing the efficacy of four immersion flush and static hydorgen peroxide and copper sulfate treatments on channel catfish eggs infected with water molds

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Water mold infestations on channel catfish eggs lower the hatch rate (egg survival) and ultimately the number of catfish fry available for stocking in production ponds. This study compared the potential of two hydrogen peroxide (HP) and two copper sulfate pentahydrate (CSP) treatments to increase c...

  13. Chemical compositions and muddy flavour/odour of protein hydrolysate from Nile tilapia and broadhead catfish mince and protein isolate.

    PubMed

    Yarnpakdee, Suthasinee; Benjakul, Soottawat; Penjamras, Pimpimol; Kristinsson, Hordur G

    2014-01-01

    Chemical compositions and muddy compounds in dorsal and ventral muscles of Nile tilapia and broadhead catfish were comparatively studied. On a dry weight basis, Nile tilapia was rich in protein (93.1-93.8%), whilst broadhead catfish contained protein (55.2-59.5%) and lipid (36.6-42.4%) as the major constituents. Ventral portion had higher lipid or phospholipid contents with coincidentally higher geosmin and/or 2-methylisoborneol (2-MIB) contents. Geosmin was found in mince of Nile tilapia and broadhead catfish at levels of 1.5 and 3.2μg/kg, respectively. Broadhead catfish mince had 2-MIB at level of 0.8μg/kg, but no 2-MIB was detected in Nile tilapia counterpart. When pre-washing and alkaline solubilisation were applied for preparing protein isolate (PI), lipid and phospholipid contents were lowered with concomitant decrease in geosmin and 2-MIB contents. Protein hydrolysate produced from PI had a lighter colour and a lower amount of muddy compounds, compared with that prepared from mince. Therefore, PI from both Nile tilapia and broadhead catfish could serve as the promising proteinaceous material, yielding protein hydrolysate with the negligible muddy odour and flavour. PMID:24001833

  14. Evaluation of the flathead catfish population and fishery on Lake Carl Blackwell, Oklahoma, with emphasis on the effects of noodling

    USGS Publications Warehouse

    Winkelman, Dana L.; Michaletz, Paul H.; Travnichek, Vincent H.

    2011-01-01

    I conducted a 3-year study at Lake Carl Blackwell, Oklahoma to estimate effects of various fishing gears on the flathead catfish Pylodictis olivaris population. Managers were particularly interested in the effect of handfishing or noodling on this population. I used a phone survey to assess angler effort and electrofishing and gill nets to calculate standard population metrics to assess composition of the current population. Survey data indicated that fishing effort and harvest were highest for trotlines and juglines and lowest for noodling. Size distribution of fish harvested by noodlers was not different from sizes that were available in the fishery and was similar to those fish harvested with other gears. Flathead catfish Sampled in Lake Carl Blackwell ranged in size from 38 to 1,220 mm total length, and 77% of the population was less than 508 mm (minimum legal size). Estimated total annual mortality was about 11%. Proportional size distribution (PSD) of flathead catfish for Lake Carl Blackwell indicates that about 70% of legal-sized flathead catfish were over the preferred size of 710 mm. Overall, the Lake Carl Blackwell flathead catfish population appeared healthy. There were a wide range of sizes and ages in the population, and PSD indicated a well-balanced population with many preferred and memorable-sized fish. Due to its rarity, noodling is probably not adversely influencing the population. Additionally, noodling at Lake Carl Blackwell does not appear to be as size-selective as previously thought. 

  15. Efficacy of Hydrogen Peroxide in Controlling Mortality Associated with External Columnaris on Walleye and Channel Catfish Fingerlings

    USGS Publications Warehouse

    Rach, J.J.; Schleis, S.M.; Gaikowski, M.; Johnson, Aaron H.

    2003-01-01

    The efficacy of hydrogen peroxide in controlling mortality associated with external columnaris infections on walleye Sander vitreus (formerly Stizostedion vitreum) and channel catfish Ictalurus punctatus fingerlings was evaluated in two on-site trials. Microscopic examination of skin scrapes before treatment confirmed the presence of bacteria indicative of columnaris disease. In separate trials, walleyes (12 g) and channel catfish (2.3 g) were exposed to a total of three every-other-day hydrogen peroxide treatments of 0, 50, 75, or 100 mg/L for 60 min. Each treatment regimen was tested in triplicate, and each replicate contained 13 walleyes or 26 channel catfish. Hydrogen peroxide exposures of 50 mg/L for 60 min significantly increased walleye survival relative to that at other treatment concentrations, including the controls. Exposures of 50, 75, or 100 mg/L of hydrogen peroxide for 60 min significantly increased channel catfish survival in comparison with that of controls. These trials indicated that hydrogen peroxide treatments effectively reduce mortality in walleyes and channel catfish infected with external columnaris.

  16. Development of a novobiocin-resistant Edwardsiella ictaluri as a novel vaccine in channel catfish (Ictalurus punctatus).

    PubMed

    Pridgeon, Julia W; Klesius, Phillip H

    2011-08-01

    The efficacy of a novel attenuated Edwardsiella ictaluri vaccine (B-50348) was determined in channel catfish (Ictalurus punctatus) by bath immersion and intraperitoneal (IP) injection. The vaccine was developed from a virulent strain of E. ictaluri (AL93-58) through selection for novobiocin resistance. When channel catfish (average weight 10 g) were IP injected with 4.2 × 10⁶ colony-forming units (CFU) of the attenuated vaccine B-50348, no fish died. However, when the same age and size matched group of the catfish were IP injected with a lesser amount (2.4 × 10⁶ CFU/fish) of modified live RE-33 vaccine or the AL93-58 virulent strain (2.5 × 10⁶ CFU/fish) of E. ictaluri, 65% and 95% fish died, respectively. When channel catfish were challenged with AL93-58, relative percent survival values of vaccinated fish were all greater than 90% at 22, 32, and 63 days post B-50348 vaccination through intraperitoneal injection. By bath immersion, at 37 and 57 days post vaccination of B-50348, relative percent survival values were both 100% when fish were challenged by virulent E. ictaluri AL93-58. Our results suggest that B-50348 could be used as a novel safe and efficacious vaccine against ESC in channel catfish.

  17. G-protein coupled receptor 18 (GPR18) in channel catfish: expression analysis and efficacy as immunostimulant against Aeromonas hydrophila infection.

    PubMed

    Pridgeon, Julia W; Klesius, Phillip H

    2013-10-01

    The objectives of this study were: 1) to determine the transcriptional profiles of G-protein coupled receptor 18 (GPR18) in channel catfish after infection with Aeromonas hydrophila compared to that in healthy catfish; 2) to determine whether over-expression of GPR18 in catfish gill cells will offer protection against infection of A. hydrophila; 3) to determine whether recombinant pcDNA-GPR18 could be used as an immunostimulant to protect channel catfish against A. hydrophila infection. Quantitative PCR revealed that the transcription levels of GPR18 in all tissues of infected catfish were significantly (P < 0.05) induced except in the intestine. When pcDNA3.2-vectored recombinant GPR18 was transfected in catfish gill cells G1B, the over-expression of pcDNA-GPR18 offered significant (P < 0.05) protection to G1B cells against A. hydrophila infection. When channel catfish were intraperitoneally injected with QCDCR adjuvant formulated pcDNA-GPR18 and challenged with a highly virulent A. hydrophila strain at 1-, 2-, 14-, and 28-days post treatment, pcDNA-GPR18 offered 50%, 100%, 57%, and 55% protection to channel catfish, respectively. Macrophages of fish treated with pcDNA-GPR18 produced significantly (P < 0.05) higher amounts of reactive oxygen species and nitric oxide than that of fish treated with pcDNA vector alone. In addition, serum lysozyme activity of catfish injected with pcDNA-GPR18 was significantly (P < 0.08) increased. Taken together, our results suggest that pcDNA-GPR18 could be used as a novel immunostimulant to provide immediate protection to channel catfish against A. hydrophila infection.

  18. Middle Miocene Hominoids dispersion and radiation: impact of climate and vegetation changes in Europe

    NASA Astrophysics Data System (ADS)

    Hamon, N.; Sepulchre, P.; Contoux, C.; Jaeger, J.-J.; Ramstein, G.

    2012-04-01

    The middle Miocene is a time of important climatic changes, and a crucial period for ape's evolution. The Middle Miocene Climatic Optimum (MMCO), that occurred approximately 17 to 15 Ma, was one of the last global warming event of the Cenozoic. This period also corresponds to the first dispersion of apes from Africa to Europe, which was made possible by tectonic and environmental changes, in particular the expansion of hominoids habitat: (sub-)tropical forest. Following the MMCO, an abrupt global cooling occurred that coincides with an important radiation of European hominoids. The most common view is that the widening of hominoids habitat during the MMCO was the main factor of their dispersion from Africa to Europe. Moreover, the major climatic change that followed induced an opening of the environment because of cooler and dryer conditions, which should have lead to a fragmentation of hominoids' habitat. This imply that hominoids evolved separately in refuges during the end of the Miocene, so the radiation observed in the fossil record of European Miocene apes is interpreted as a divergent evolution in a fragmented habitat. However, no study has yet demonstrated this evolutionary scenario. Our aim is to study the environmental changes during the middle Miocene, in particular climate and vegetation changes, and to link them with these two major events of hominoids' evolution. Using climate and vegetation models, we investigate the role of environmental variation in hominoids' evolution during the middle Miocene, in particular between 17 and 14 Ma. We perform two climatic experiments (16Ma and 14Ma) with the atmospheric general circulation model LMDZ. The results of these experiments will then be used to force the dynamic vegetation model CARAIB. This should help us to simulate hominoids' habitat for the two time period chosen, and to discuss the role of important climate change for Miocene apes evolution.

  19. New insights to the middle Miocene pCO2 problem (Invited)

    NASA Astrophysics Data System (ADS)

    Badger, M. P.; Foster, G. L.; Lear, C. H.; Pancost, R. D.; Bailey, T. R.; Leng, M. J.; Abels, H. A.

    2013-12-01

    The climate of the middle Miocene was substantially different to today with a much warmer world with boundary conditions (plate configurations, ocean circulation etc) that were very different to the present. The sustained warmth of the 'Middle Miocene Climate Optimum' prevailed prior to the second step of the descent into the ice-house - with the major expansion of Antarctic ice sheet and global cooling at the middle Miocene Climate Transition. Coincident with these major changes in global temperatures and the cryosphere were substantial perturbations of the carbon cycle, as documented by the large fluctuations in oceanic carbonate δ13C values during the 'Monterey Excursion' as well as the various 'CM' events superimposed upon it. Critical to our understanding of Miocene climate and carbon cycle dynamics is a full understanding of atmospheric pCO2 during this fascinating time. A number of Miocene atmospheric pCO2 estimates are now available (Kürschner, Kvaček and Dilcher, 2008; Foster, Lear and Rae, 2012; Badger et al., 2013) that help to better understand this relationship but differences between these new records and older published records (ie Pagani et al., 1999; Pearson and Palmer, 2000) raise interesting questions as to the drivers of Miocene climate and carbon cycling. Here we will discuss the implications of our records for the Monterey Excursion and the CM events, as well as presenting a novel probabilistic re-assessment of new and existing atmospheric pCO2 records. The combination of a larger dataset and more quantitative approach allows us to answer some of the outstanding questions about the operation of the Miocene climate system, and help to explain the apparent disparity between atmospheric pCO2 records and proxy temperature estimates.

  20. Miocene ungulates and terrestrial primary productivity: Where have all the browsers gone?

    PubMed Central

    Janis, Christine M.; Damuth, John; Theodor, Jessica M.

    2000-01-01

    Progressive changes are observed in both the composition of mammal faunas and vegetation during the Miocene epoch [24–5 mega-annum (Ma)]. These changes are usually interpreted as a response to climatic changes. In the traditional view, forests or woodlands gradually gave way to more open habitats, with grazing (grass-eating) ungulate (hoofed) mammal species replacing the browsing (leafy-vegetation-eating) species as grasslands expanded. However, data from fossil assemblages in the Great Plains region of North America show that this faunal change was not a one-for-one replacement of browsers by grazers, as usually thought. Typical late early Miocene (17 Ma) fossil communities included extraordinarily high numbers of browsing ungulate species, comprising a fauna that cannot be directly analogized with any present-day community. Both maximum species richness of all ungulates and the proportion of browsers declined steadily in ungulate communities through the middle Miocene, to levels comparable to those of the present by the late Miocene. The resulting dramatic, cumulative loss of browsing species constitutes one of the strongest faunal signals of the late Tertiary (but was not a single “event”). We suggest that the early Miocene browser-rich communities may reflect higher levels of primary productivity in Miocene vegetation, compared with equivalent present-day vegetation types. The observed decline in species richness may represent a gradual decline in primary productivity, which would be consistent with one current hypothesis of a mid-Miocene decrease in atmospheric CO2 concentrations from higher mid-Cenozoic values. PMID:10884422

  1. Fish Productivity in Open-Ocean Gyre Systems in the Late Oligocene and Miocene

    NASA Astrophysics Data System (ADS)

    Cuevas, J. M.; Sibert, E. C.; Norris, R. D.

    2015-12-01

    Understanding how marine ecosystems respond to climate change is very important as we continue to warm the climate. Fish represent a critical protein source for a significant portion of the global population, and as such, an understanding of fish production and its interactions with climate change may help better prepare for the future. Ichthyoliths, fossil fish teeth and shark scales, are a novel fossil group which can be used as an indicator for fish productivity. Several important climate events occurred during the Miocene (7 to 23 Ma), including the Middle Miocene Climatic Optimum. Here we reconstruct fish production from across the Miocene from Pacific and Atlantic Ocean gyres. South Atlantic samples, from Deep Sea Drilling Program (DSDP) Site 522 spanning from 30 to 20 Ma, show fairly variable numbers in the Oligocene (ranging from 100 to 800 ich/cm2/yr), but stabilization in the Early Miocene (around 400 ich/cm2/yr), suggesting that the beginning of the Miocene brought consistent conditions for fish production. In the North Pacific, our record from Ocean Drilling Program (ODP) Site 886 shows a distinct crash in fish productivity at 11 Ma, from 3500 ich/cm2/yr to a steady decline around 100 ich/cm2/yr for the next million years. This crash is followed by a marked increase in the presence of diatoms and biogenous opal. This is somewhat surprising, since in modern oceanic systems, an increase in diatoms and other large-celled phytoplankton is associated with shorter, more efficient food chains and higher levels of fish. It is also interesting to note that denticles remain consistently low at both sites, indicating consistently low shark populations through this time period. Together, these results suggest that the Late Oligocene and Miocene was a time of variable fish production and provide a window into understanding of dynamic ecosystem changes through the Miocene in open-ocean gyre ecosystems.

  2. Late Miocene “washhouse” climate in Europe

    NASA Astrophysics Data System (ADS)

    Böhme, Madelaine; Ilg, August; Winklhofer, Michael

    2008-11-01

    We present two eight-million year long proxy records of precipitation for Southwest and Central Europe, covering the middle to late Miocene (5.3-13 Ma) at a temporal resolution of about 60 kyr and 150 kyr, respectively. The estimates of precipitation are based on the ecophysiological structure of herpetological assemblages (amphibians and reptiles). From 13.0 Ma until about 9 Ma, both records show a similar trend, evolving from a long dry period (13-11 Ma) into a "washhouse climate" (10.2-9.8 Ma), characterized by global warm conditions and several times more precipitation than present. The transition from washhouse to a dryer climate between 9.7 and 9.5 Ma and the concomitant cooling episode appear to have triggered a severe biotic event known as the Vallesian crisis, which included the extinction of hominoids in Western Europe. A second washhouse period (9.0-8.5 Ma), coeval with a global warm episode, was unprecedentedly intense in Southwest Europe, but less pronounced in Central Europe. From 8 Ma onward, a divergence in the two precipitation records is observed, with Southwest Europe staying wetter and Central Europe becoming dryer than present. Both precipitation records are combined into a common run-off curve as a measure of the relative intensity of the hydrological cycle for moderate latitudes of continental Europe. The run-off curve shows a remarkable positive correlation with Atlantic deep-water temperatures from Ceará Rise by Lear et al. (2003), which are significantly higher (up to + 3 °C) during the two washhouse periods and show no other positive excursion of comparable magnitude. We discuss potential links and the role of the coeval temporary restriction of the Central American Seaway on ocean and atmosphere circulation.

  3. Interactions between non-native armored suckermouth catfish (Loricariidae: Pterygoplichthys) and native Florida manatee (Trichechus manatus latirostris) in artesian springs

    USGS Publications Warehouse

    Nico, Leo G.; Loftus, William F.; Reid, James P.

    2009-01-01

    Non-native suckermouth armored catfishes (Loricariidae) of the genus Pterygoplichthys are now common throughout much of peninsular Florida. In this paper, we present preliminary observations on interactions between a Pterygoplichthys species, tentatively identified as P. disjunctivus (Weber, 1991), and endangered native Florida manatees, Trichechus manatus latirostris (Harlan, 1824), in artesian spring systems in Florida's St. Johns River drainage. The introduced catfish have become abundant in spring habitats, sites used by manatees as winter thermal refuges. In the spring runs, Pterygoplichthys regularly attaches to manatees and grazes the epibiota on their skin. On occasion, dozens of Pterygoplichthys congregate on individual manatees. Manatee responses varied widely; some did not react visibly to attached catfish whereas others appeared agitated and attempted to dislodge the fish. The costs and/or benefits of this interaction to manatees remain unclear.

  4. The use of eugenol against Aeromonas hydrophila and its effect on hematological and immunological parameters in silver catfish (Rhamdia quelen).

    PubMed

    Sutili, Fernando Jonas; Kreutz, Luiz Carlos; Noro, Mirela; Gressler, Leticia Trevisan; Heinzmann, Berta Maria; de Vargas, Agueda Castagna; Baldisserotto, Bernardo

    2014-02-15

    The aim of this study was to evaluate the activity of eugenol against the fish pathogen Aeromonas hydrophila and eugenol's effect on hematological and natural immune parameters in silver catfish (Rhamdia quelen). In vitro, eugenol showed weak activity against A. hydrophila, but in vivo, at a subinhibitory concentration (10 mg L(-1)), it promoted survival in infected silver catfish. Eugenol (50 μg mL(-1)) reduced the hemolytic activity of A. hydrophila supernatant in vitro in fish erythrocytes. Subjecting catfish to eugenol baths (5 and 10 mg L(-1)) for five days did not alter the hematological and immunological parameters studied in this work. Based on these results, eugenol can be used to treat or prevent bacterial diseases in fish.

  5. Chemotactic Activity of Cyclophilin A in the Skin Mucus of Yellow Catfish (Pelteobagrus fulvidraco) and Its Active Site for Chemotaxis.

    PubMed

    Dawar, Farman Ullah; Tu, Jiagang; Xiong, Yang; Lan, Jiangfeng; Dong, Xing Xing; Liu, Xiaoling; Khattak, Muhammad Nasir Khan; Mei, Jie; Lin, Li

    2016-01-01

    Fish skin mucus is a dynamic barrier for invading pathogens with a variety of anti-microbial enzymes, including cyclophilin A (CypA), a multi-functional protein with peptidyl-prolyl cis/trans isomerase (PPIase) activity. Beside various other immunological functions, CypA induces leucocytes migration in vitro in teleost. In the current study, we have discovered several novel immune-relevant proteins in yellow catfish skin mucus by mass spectrometry (MS). The CypA present among them was further detected by Western blot. Moreover, the CypA present in the skin mucus displayed strong chemotactic activity for yellow catfish leucocytes. Interestingly, asparagine (like arginine in mammals) at position 69 was the critical site in yellow catfish CypA involved in leucocyte attraction. These novel efforts do not only highlight the enzymatic texture of skin mucus, but signify CypA to be targeted for anti-inflammatory therapeutics. PMID:27589721

  6. Next generation sequencing yields the complete mitochondrial genome of the striped raphael catfish, Platydoras armatulus (Siluriformes: Doradidae).

    PubMed

    Liu, Shikai; Yao, Jun; Zhang, Jiaren; Liu, Zhanjiang

    2016-05-01

    Striped raphael catfish, Platydoras armatulus, belongs to catfish family Doradidae, which are endemic to South America and featured by a single row of thorny scutes along the lateral line. In this study, we determined the complete mitochondrial genome of P. armatulus by next generation sequencing of genomic DNA without prior sample processing or primer design. Bioinformatics analysis provided the full-length mitogenome sequence of 16,470 bp. The P. armatulus mitogenome is composed of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and 1 control region, showing typical circular molecule structure as in other vertebrates. The whole genome base composition was estimated to be 30.9% A, 25.2% T, 15.9% G and 28.0% C, with A/T bias of 56.1%. The generation of P. armatulus mitogenome sequence enriched catfish molecular resources that are valuable for phylogenetic analysis and species identification studies.

  7. Chemotactic Activity of Cyclophilin A in the Skin Mucus of Yellow Catfish (Pelteobagrus fulvidraco) and Its Active Site for Chemotaxis

    PubMed Central

    Dawar, Farman Ullah; Tu, Jiagang; Xiong, Yang; Lan, Jiangfeng; Dong, Xing Xing; Liu, Xiaoling; Khattak, Muhammad Nasir Khan; Mei, Jie; Lin, Li

    2016-01-01

    Fish skin mucus is a dynamic barrier for invading pathogens with a variety of anti-microbial enzymes, including cyclophilin A (CypA), a multi-functional protein with peptidyl-prolyl cis/trans isomerase (PPIase) activity. Beside various other immunological functions, CypA induces leucocytes migration in vitro in teleost. In the current study, we have discovered several novel immune-relevant proteins in yellow catfish skin mucus by mass spectrometry (MS). The CypA present among them was further detected by Western blot. Moreover, the CypA present in the skin mucus displayed strong chemotactic activity for yellow catfish leucocytes. Interestingly, asparagine (like arginine in mammals) at position 69 was the critical site in yellow catfish CypA involved in leucocyte attraction. These novel efforts do not only highlight the enzymatic texture of skin mucus, but signify CypA to be targeted for anti-inflammatory therapeutics. PMID:27589721

  8. Post-Miocene extension in Central Anatolia; It's linkage to Aegean extension

    NASA Astrophysics Data System (ADS)

    Rojay, Bora; Özsayın, Erman

    2013-04-01

    Post-Miocene extension in Central Anatolia; It's linkage to Aegean extension Anatolian Plate, -where Central Anatolia situated on-, escapes westward onto African plate along Eastern Mediterranean-Cyprus subduction zone, sliding by North and East Anatolian faults. Central Anatolia is bounded by dextral North Anatolian Fault from north, Taurides from south and it is fragmented by strike slip faults evolving under N-S compression in east and by Aegean horst and grabens evolving under N-S extension in west. To be able to delineate and understand the deformational order in Central Anatolia and its linkage to Aegean region, various sectors with the Anatolia are chosen, namely, Ankara region (Beypazarı to Kazan Miocene basins), Eskişehir region (Mihallıçık to İnönü Miocene basins) in Central Anatolia, Gediz-Alaşehir Graben and Efes areas in Western Anatolia are selected. To sum up, in a wide region from Central Anatolia to Western Anatolia, i. Unconformities btw uppermost Late Miocene and Plio-Quaternary, and btw Plio-Quaternary and Quaternary are clearly identified in both regions, ii) ENE-WSW to N-S compression (intense post-Late Miocene - pre-Pliocene folding) with almost E-W extension operates during post-Miocene (during Pliocene) is followed by a short lived strike slip deformation during Early Pliocene, and finally by NW-SE to WNW-ESE oriented multi directional extension during post-Plio-Quaternary. And in Gediz-Alaşehir Graben and Efes (western Anatolia); a continuous NNE-SSW to NE-SW multi directed extension since post-Late Miocene following almost N-S compression (post-Early Miocene) operated. Dextral strike slip faulting with normal components and normal faulting with right lateral strike slip components are recorded on same fault planes, iii) Quaternary normal faulting post dates folding, reverse and strike slip faulting in both regions. However, right lateral strike slip faulting is recorded to the NW tip of the normal faults like Efes, Manisa and

  9. Provenance of the lower Miocene of the Gulf of Mexico from detrital zircon double dating

    NASA Astrophysics Data System (ADS)

    xu, J.

    2013-12-01

    The lower Miocene interval of the Gulf of Mexico (GOM) has recently gained increasing attention from oil and gas industry due to its hydrocarbon potential below the salt canopy. However, it has been less well studied than both the underlying Oligocene and overlying middle Miocene strata. The lower Miocene worldwide is a transitional period of tectonic, climatic, and oceanographic change. In particular, it is a period of major tectonic reorganization in the western interior of North America (Rocky Mountains), involving a shift from the Oligocene thermal phase, with abundant volcanic activity recorded in the thick Frio/Vicksburg succession of the GOM, to the Miocene Basin-Range extensional phase. Climatic conditions also changed from a relatively arid Oligocene to wetter Miocene, resulting in increased sediment yields from exhumed tectonic structures. Previous provenance studies used proportions of quartz, feldspar and lithic fragments and consideration of likely river courses through known paleogeomorphological elements. Only limited detrital zircon (DZ) U-Pb studies on Paleocene strata have been undertaken and there has been no previous U-Pb and (U-Th)/He double dating in the GOM. In this study we apply the latest analytical approaches, such as DZ U-Pb dating to gain robust source terranes ages and more fully elucidate the complex sediment provenance and dispersal history of GOM. We also employ DZ (U-Th)/He (ZHe) dating, combined with DZ U-Pb, to not only define sedimentary provenance but also the exhumation histories of detrital source regions. Samples of lower Miocene outcrop exposures in Texas and Louisiana have been collected to discriminate the varied tectonic and drainage system changes across the basin in lateral. In addition, samples from the Eocene, Oligocene and middle Miocene have been obtained to reveal vertical shift of source terranes contributions. Our initial age data show detrital zircons of lower Miocene sediments come from a wide range of source

  10. Integrated assessment of biomarker response in carp (Cyprinus carpio) and silver catfish (Rhamdia quelen) exposed to clomazone.

    PubMed

    Murussi, Camila R; Costa, Maiara; Menezes, Charlene; Leitemperger, Jossiele; Guerra, Luciana; Lópes, Thais; Severo, Eduardo; Zanella, Renato; Loro, Vania Lucia

    2015-05-01

    Clomazone is considered a potential contaminant of groundwater and is persistent in the environment. To verify the effects of clomazone in Cyprinus carpio and Rhamdia quelen, a method that combines biomarker responses into an index of "integrated biomarker response" (IBR) was used for observed biological alterations in these species. Thiobarbituric acid-reactive substances in liver of carp and silver catfish decreased at both concentrations tested. However, in muscle it increased in carp at 3 mg/L and silver catfish at 6 mg/L. Protein carbonyl increased in liver (3 and 6 mg/L) and muscle (6 mg/L) of carp. In carp, superoxide dismutase (SOD) increased at 3 mg/L and catalase at 6 mg/L. In silver catfish, SOD in liver decreased at 3 mg/L. Glutathione-S-transferase increased at 3 mg/L in muscle of carp. Nonprotein thiol levels decreased at both concentrations in liver of silver catfish and muscle of carp. In silver catfish, acetylcholinesterase (AChE) decreased in brain at 6 mg/L. Nevertheless, AChE in muscle of both species increased at 3 and 6 mg/L. IBR was standardized scores of biomarker responses and was visualized using star plots. The IBR values shown that in carp there was predominantly an induction of parameters, whereas in silver catfish there was inhibition of these responses. In this way, IBR may be a practical tool for the identification of biological alterations in fish exposed to pesticides. In the present study, IBR was efficient for comparisons of fish species using clomazone. This study may serve as a base for evaluation of other pesticides in the rice field, environment, or laboratory experiment.

  11. Identification of multiple dmrt1s in catfish: localization, dimorphic expression pattern, changes during testicular cycle and after methyltestosterone treatment.

    PubMed

    Raghuveer, K; Senthilkumaran, B

    2009-05-01

    The double sex and mab-3 related (DM) transcription factor 1 (dmrt1) plays an important role in testicular differentiation. Here, we report cloning of multiple dmrt1s, a full-length and two alternative spliced forms from adult catfish (Clarias gariepinus) testis, which encode predicted proteins of 287 (dmrt1a), 253 (dmrt1b) and 233 (dmrt1c) amino acid residues respectively. Interestingly, dmrt1c lacks the majority of the DM domain. Multiple dmrt1s (dmrt1a and dmrt1c) were obtained from Clarias batrachus as well. Tissue distribution (transcript and protein) of catfish dmrt1 revealed exclusive expression in testis. Semi-quantitative RT-PCR revealed the presence of multiple dmrt1s with high levels of dmrt1a in adult testis but not in ovary. Real-time RT-PCR analysis during testicular cycle showed higher levels of dmrt1 transcripts in preparatory and pre-spawning when compared with spawning and post-spawning phases. Immunocytochemical and immunofluorescence localization revealed the presence of catfish Dmrt1 protein in spermatogonia and spermatocytes, which indicates plausible role in spermatogenesis. Histological analysis indicated initiation of gonadal sex differentiation in catfish around 40-50 days after hatching. The potential role for dmrt1 in testicular differentiation is evident from its stage-dependent elevated expression in developing testis. Furthermore, dimorphic expressions of dmrt1s were evident at different stages of gonadal development or recrudescence in catfish. Treatment of methyl testosterone (MT) during early stages of gonadal sex differentiation resulted in adult males. Interestingly, we also obtained MT-treated fishes having ova-testis gonads. Analysis of dmrt1, sox9a, foxl2 and cyp19a1 expression patterns in MT-treated gonads revealed tissue-specific pattern. These results together suggest that multiple dmrt1s are testis-specific markers in catfish.

  12. A Leukocyte Immune-Type Receptor Subset Is a Marker of Antiviral Cytotoxic Cells in Channel Catfish, Ictalurus punctatus.

    PubMed

    Taylor, Erin B; Moulana, Mohadetheh; Stuge, Tor B; Quiniou, Sylvie M A; Bengten, Eva; Wilson, Melanie

    2016-03-15

    Channel catfish, Ictalurus punctatus, leukocyte immune type receptors (LITRs) represent a multigene family that encodes Ig superfamily proteins that mediate activating or inhibitory signaling. In this study, we demonstrate the use of mAb CC41 to monitor viral cytotoxic responses in catfish and determine that CC41 binds to a subset of LITRs on the surface of catfish clonal CTLs. Homozygous gynogenetic catfish were immunized with channel catfish virus (CCV)-infected MHC-matched clonal T cells (G14D-CCV), and PBL were collected at various times after immunization for flow cytometric analyses. The percentage of CC41(+) cells was significantly increased 5 d after primary immunization with G14D-CCV and at 3 d after a booster immunization as compared with control fish only injected with G14D. Moreover, CC41(+) cells magnetically isolated from the PBL specifically killed CCV-infected targets as measured by (51)Cr release assays and expressed messages for CD3γδ, perforin, and at least one of the CD4-like receptors as analyzed by RNA flow cytometry. When MLC effector cells derived from a G14D-CCV-immunized fish were preincubated with CC41 mAb, killing of G14D-CCV targets was reduced by ∼40%, suggesting that at least some LITRs have a role in target cell recognition and/or cytotoxicity. The availability of a LITR-specific mAb has allowed, to our knowledge for the first time, functional characterization of LITRs in an autologous system. In addition, the identification of an LITR subset as a cytotoxic cell marker will allow for more effective monitoring of catfish immune responses to pathogens. PMID:26856701

  13. Effect of abyssal circulation changes on Oligocene to Miocene benthic foraminifera in the North Atlantic

    SciTech Connect

    Katz, M.E.; Miller, K.G.

    1985-01-01

    Benthic foraminiferal ranges at western North Atlantic Sites 563 and 558 show: 1) gradual Oligocene last occurrences in response to subsidence from the upper to lower abyssal zones; 2) a preponderance of extinctions in the early middle Miocene (about 15.5-13.5 Ma). Comparison of relative and absolute abundance changes at Site 563 sows that percentages of some taxa (e.g. Nuttallides umbonifera) reliably reflect their accumulations while percentages of others vary independently. Regional abundance changes include: 1) maxima N. umbonifera in the middle Oligocene of the deepest sites (10 and 119); 2) increased Planulina wuellerstorfi in the early middle Miocene; 3) increased N. umbonifera in the late middle Miocene. Seismic stratigraphic and delta/sup 13/C evidence indicates a northern bottom-water source for the North Atlantic throughout much of the Oligocene and Miocene. Benthic foraminifera apparently responded to bottom-water changes inferred from carbon isotopic comparisons. The extinction of relict Paleogene taxa and the ascendancy of P. wuellerstorfi in the middle Miocene apparently correlate with increased advection into the eastern Atlantic, subsidence of the Iceland-Faeroe Ridge and increased North Atlantic carbonate sedimentation. The authors speculate that this faunal reorganization was in response to global ocean chemistry changes resulting from increased ventilation of the North Atlantic.

  14. Oligocene-Miocene Sr-isotope stratigraphy: Examples from eastern North America

    SciTech Connect

    Sugarman, P.J. ); Owens, J.P.; Gibson, T.G.; McCartan, L. ); Feigenson, M.D. )

    1994-03-01

    Sr-isotopic age estimates from the coastal plain in New Jersey, Maryland Virginia, and Florida have allowed correlation of upper Oligocene-Miocene stratigraphic sequences with an accuracy of [+-] 0.5--2.0 m.y. The upper Oligocene sequence mapped in New Jersey has an age range of 28.7--24.2 Ma, and is tentatively correlated with the Old Church Formation in Virginia. Sr-isotope age estimates of 28.6--25.3 in the lower part of the Arcadia Formation in Florida provide a chronostratigraphic correlation with the upper Oligocene, N.J. sequence. Miocene Sr-isotopic correlations are better constrained by improved age resolution of [+-]1 m.y. and less in the Miocene. The uppermost lower Miocene sequence in N.J. with Sr-isotopic age estimates of 17.4--15.5 Ma, can be correlated with the Calvert Formation in Maryland and the upper part of the Arcadia Formation in Florida based on Sr-isotopic correlations. The uppermost calcareous marine sequence in New Jersey is lower middle Miocene, with a Sr-isotopic age range of 13.6--12.2 Ma. This sequence is correlative with the Choptank Formation in Maryland. The St. Mary's Formation in Maryland has a Sr-isotopic age range of 10--9.6 Ma, and may be equivalent to the Cohansey Formation in New Jersey.

  15. Lithostratigraphy and vertebrate biostratigraphy of the early Miocene Himalayan Foreland, Zinda Pir Dome, Pakistan

    NASA Astrophysics Data System (ADS)

    Downing, Kevin F.; Lindsay, Everett H.; Downs, William R.; Speyer, Stephen E.

    1993-09-01

    Deposits in the Sulaiman foothills and Zinda Pir Dome in west-central Pakistan provide new insight into the critical early Miocene record of Himalayan Foreland sedimentation and paleobiology. The Chitarwata Formation, which underlies the Vihowa Formation in the Sulaiman foothills predates the Siwalik deposits on the Potwar Plateau of north-central Pakistan and provides a record of mammals spanning the interval between the early Miocene Bugti fauna and middle Miocene to Pleistocene Siwalik faunas. Siwalik deposits on the Potwar Plateau are no older than middle Miocene; they represent fluvial environments. In contrast, the Chitarwata and Lower Vihowa Formations in the Zinda Pir Dome represent coastal-delta plain and fluvial environments, respectively. Biostratigraphic information from the Chitarwata Formation, coupled with paleomagnetic data (reported by Friedman et al., 1992) from coincident strata, suggest that coastal environments persisted in the area of the Sulaiman foothills until about 18.6 Ma when they were replaced by fluvial environments, probably representing the ancestral Indus River system. Apparently, during the early Miocene when sediments of the Chitarwata Formation were accumulating on the western portion of the Himalayan Foreland Basin much of the area of the Potwar Plateau to the north was being eroded. The overlying Vihowa Formation, along with the relatively contemporaneous Kamlial Formation on the Potwar Plateau, represent the appearance of widespread terrestrial sedimentation in the Himalayan Foreland Basin.

  16. Organic geochemical evaluations of bituminous rock and coals in Miocene Himmetoglu basin (Bolu, Turkey)

    SciTech Connect

    Sari, A.; Geze, Y.

    2008-07-01

    The studied area is a lake basin located in Bolu basin in Turkey. In the basin, from Upper Cretaceous to Upper Miocene 3,000-m thickness sediments were deposited. Upper Miocene Himmetoglu formation consisted of sandstone, claystone, and marl. To the middle level of the formation are located coal, bituminous limestone, and bituminous shales. In the basin, there are two coal beds whose thicknesses range from 1 to 13 m. The coals are easily breakable and black in color. In the coal beds exists some bituminous limestone and bituminous shales, and their thicknesses are between 5 and 45 cm. The amount of organic matter of the bituminous rocks from the Upper Miocene Himmetoglu formation are between 6.83 and 56.34 wt%, and the amount of organic matter of the bituminous limestone from the formation are between 13.58 and 57.16 wt%. These values indicate that these rocks have very good source potential. According to hydrogen index (HI), S2/S3, HI-T{sub max}, and HI-OI (oxygen index) parameters, kerogen types of the bituminous rocks and coals belonging to Upper Miocene Himmetoglu formation are Type I, Type II, and Type III. In accordance with HI, S2/S3, HI-T{sub max}, and HI-OI parameters, the bituminous rocks and coals from the Upper Miocene Himmetoglu formation are mostly immature.

  17. Paleomagnetism of the Ishikoshi Andesite: a Middle Miocene paleomagnetic pole for northeastern Japan and tectonic implications

    NASA Astrophysics Data System (ADS)

    Hoshi, Hiroyuki; Teranishi, Yuki

    2007-07-01

    To determine a Middle Miocene paleomagnetic pole for northeastern Japan and discuss its tectonic implications, we obtained new paleomagnetic results from Middle Miocene (about 14 Ma) dacite and andesite flows of the Ishikoshi Andesite. Characteristic remanent magnetizations were isolated from 12 lava sites by means of detailed alternating field and thermal demagnetizations. Analysis of demagnetization results and rock magnetic experiments indicated that magnetite or Ti-poor titanomagnetite is the main magnetic carrier. We obtained a formation mean direction ( D = 9.2°, I = 65.9°, α95 = 7.3°, k = 40.5, N = 11) and compared it with published paleomagnetic results from other areas of northeastern Japan to discuss tectonic rotation. This comparison provided a mean paleomagnetic pole (85.9°N, 236.6°E, A 95 = 6.2°, K = 115.9, N = 6) that we consider represents the Middle Miocene pole for northeastern Japan. It is statistically indistinguishable from coeval poles for southwestern Japan, South Korea, and northern China, and we therefore conclude that northeastern Japan as a whole has not been subjected to tectonic rotation since the Middle Miocene. A reassessment of geologic and paleomagnetic data suggests that a previous model of the Late Miocene or later counterclockwise rotation of northeastern Japan is based on tilt-uncorrected paleomagnetic directions from tilted rock units.

  18. Mineralogy and diagenesis of miocene and pleistocene sediments, Northeastern Gulf of Mexico

    SciTech Connect

    Conner, S.P.; Denham, M.E.; Tieh, T.T.

    1988-01-01

    Cored Miocene and Pleistocene sediments from the northeastern Gulf of Mexico (ranging in depth from 1,400 to 2,000 m) consist of interbedded sands, silts, and muds with varying degrees of consolidation. Samples selected from these sediments were studied for their mineralogy and diagenesis. The Miocene sediments represent various subenvironments of the ancestral Mississippi River delta complex; Pleistocene sediments are marine shelf deposits. Sands from both Miocene and Pleistocene cores are fine to very fine-grained feldspathic litharenites with abundant (approx. = 25%) matrix fines and minor (<7%) carbonate clasts and shell fragments. Carbonate diagenesis is a continuing process in these sediments. Clayey sands contain disseminated siderite crystallites formed during organic matter fermentation. In clean sands, scattered thin (<15 cm) bands of poikilotopic carbonate-cemented sand are present in the middle of thicker unconsolidated intervals. Cemented bands are thicker in the Miocene section, having grown during burial through dissolution of shell fragments and reprecipitation at the margin of cemented zones. Diagenetic events evident in the Miocene core illustrate processes that could occur in the Pleistocene sediments with continued burial. These are: (1) dolomitization of some calcite cements, (2) precipitation of Fe-carbonate as crystallites, rims on dolomite cements, and overgrowths on siderite crystallites, and (3) zeolite formation on amorphous silica substrates. Amorphous silica is associated with limited dissolution of feldspars or lithic fragments.

  19. A fish assemblage from an early Miocene horizon from Jabal Zaltan, Libya

    NASA Astrophysics Data System (ADS)

    Argyriou, Thodoris; Cook, Todd D.; Muftah, Ahmed M.; Pavlakis, Paris; Boaz, Noel T.; Murray, Alison M.

    2015-02-01

    Recent excavations and prospecting in the early to middle Miocene deposits of the Maradah Formation in Jabal Zaltan, Libya, yielded a diverse fish assemblage coming from an early Miocene locality. The material described here includes more than 18 marine and freshwater taxa most of which were previously unreported from the area. Jabal Zaltan is one of the very few early Miocene Afroarabian fossil sites that produced such a diverse fish sample. Therefore, the fossils described here provide a unique insight into the composition of the early Miocene fish faunas from the northern African coast; a critical time period for faunas of the continent, as contact with Eurasia ended 100 million years of African isolation. In addition, the Jabal Zaltan fossils help consolidate the validity of Galeocerdo mayumbensis and extend its geographic range to include the Tethys. The Maradah deposits also host the first occurrences of two genera (Pteromylaeus, Distichodus) in the fossil record. The fish finds support the presumed depositional environment that of tropical shallow estuarine to deltaic conditions, and the freshwater fishes document the presence of a modern-type Nilosudanian fauna containing elements with both African and Asian affinities. The Jabal Zaltan ichthyofauna, with its diversity of taxa, has the potential to become a key reference fauna for future studies of early Miocene African fishes.

  20. A sphenodontine (Rhynchocephalia) from the Miocene of New Zealand and palaeobiogeography of the tuatara (Sphenodon)

    PubMed Central

    Jones, Marc E.H.; Tennyson, Alan J.D.; Worthy, Jennifer P.; Evans, Susan E.; Worthy, Trevor H.

    2009-01-01

    Jaws and dentition closely resembling those of the extant tuatara (Sphenodon) are described from the Manuherikia Group (Early Miocene; 19–16 million years ago, Mya) of Central Otago, New Zealand. This material is significant in bridging a gap of nearly 70 million years in the rhynchocephalian fossil record between the Late Pleistocene of New Zealand and the Late Cretaceous of Argentina. It provides the first pre-Pleistocene record of Rhynchocephalia in New Zealand, a finding consistent with the view that the ancestors of Sphenodon have been on the landmass since it separated from the rest of Gondwana 82–60 Mya. However, if New Zealand was completely submerged near the Oligo-Miocene boundary (25–22 Mya), as recently suggested, an ancestral sphenodontine would need to have colonized the re-emergent landmass via ocean rafting from a currently unrecorded and now extinct Miocene population. Although an Early Miocene record does not preclude that possibility, it substantially reduces the temporal window of opportunity. Irrespective of pre-Miocene biogeographic history, this material also provides the first direct evidence that the ancestors of the tuatara, an animal often perceived as unsophisticated, survived in New Zealand despite substantial local climatic and environmental changes. PMID:19203920

  1. Miocene-Pliocene transition in the southern Cyprus basins: The sedimentary expression of regional tectonic events

    SciTech Connect

    Orzag-Sperber, F.; Rouchy, J.M. )

    1988-08-01

    In the southern part of Cyprus, a Maastrichtian-Pleistocene sedimentary area fringes Troodos Mountain, a fragment of an ancient crust. During the Neogene, three basins formed in this area: Polemi, Pissouri, and Psematismenos. A deep marine condition has prevailed since the Maastrichtian. During the Paleocene and early Miocene, the sea gradually become shallower until the Messinian, where the most spectacular sedimentary event concerns the deposition of evaporites contemporaneous with other Mediterranean evaporites. Some sedimentary phenomena express the tectonic instability during the upper Miocene. A well-known tectonic event affecting the east Mediterranean region generally referred to as the Miocene-Pliocene phase occurs at the Miocene-Pliocene limit. Recent sedimentological studies indicate this event is in fact complex. The Tortonian-lower Pliocene period is marked by a constraint involving an N20 distension in the Polemi and Pissouri basins and an N100 distension in the Psematismenos basin. Sedimentologic studies have demonstrated three tectonic pulsations during the Messinian prior to the Pliocene transgression. These are expressed by two episodes of seismic brecciation and a paleoemersion indicated by paleosols and detrital discharges. These phenomena suggest brief tectonic instability during the Messinian. Microtectonic studies reveal that the main change in tectonic constraint does not coincide with the Miocene-Pliocene contact but occurs at the top of the lower Pliocene.

  2. Molluscan evidence for early middle Miocene marine glaciation in southern Alaska

    USGS Publications Warehouse

    Marincovich, L., Jr.

    1990-01-01

    Profound cooling of Miocene marine climates in southern Alaska culminated in early middle Miocene coastal marine glaciation in the northeastern Gulf of Alaska. This climatic change resulted from interaction of the Yakutat terrane with southern Alaska beginning in late Oligocene time. The ensuing extreme uplift of the coastal Chugach and St. Elias Mountains resulted in progressive regional cooling that culminated in coastal marine glaciation beginning in the early middle Miocene (15-16 Ma) and continuing to the present. The counterclockwise flow of surface water from the frigid northeastern Gulf of Alaska resulted in a cold-temperate shallow-marine environment in the western Gulf of Alaska, as it does today. Ironically, dating of Gulf of Alaska marine glaciation as early middle Miocene is strongly reinforced by the presence of a few tropical and subtropical mollusks in western Gulf of Alaska faunas. Shallow-marine waters throughout the Gulf of Alaska were cold-temperate to cold in the early middle Miocene, when the world ocean was undergoing peak Neogene warming. -Author

  3. Prevalence of pansteatitis in African sharptooth catfish, Clarias gariepinus (Burchell), in the Kruger National Park, South Africa.

    PubMed

    Huchzermeyer, K David A

    2012-11-09

    Pansteatitis was confirmed in sharptooth catfish, Clarias gariepinus (Burchell), from three main locations within the Kruger National Park (KNP); the Olifants River Gorge, Engelhard Dam on the Letaba River and from the Sabie River in the Sabiepoort. An increasing prevalence of pansteatitis was observed in catfish during repeated samplings from the Olifants Gorge from 2009 to 2011 and co-existence of old and recent lesions indicated on-going incitement of pansteatitis. Only a low prevalence of pansteatitis was observed in catfish sampled from the Olifants River upstream of the Gorge in the KNP and no pansteatitis was observed in catfish sampled from a rain-filled dam not connected to the Olifants River. Common to both the Olifants Gorge and the Sabiepoort is the damming of the rivers in Mozambique to form lakes Massingir and Corumana respectively. Anthropogenic activities resulting in potential pollution of the rivers differ greatly between these two catchments, providing argument against a primary pollution-related aetiology of the pansteatitis found at these two sites. Compared with other sites, analysis of stomach contents of catfish from the Olifants Gorge and the Sabiepoort strongly suggested that consumption of a predominantly fish diet was associated with the development of pansteatitis in these fish. In a farmed population of catfish used as positive control, development of pansteatitis could be ascribed to consumption of rancid fish waste from a trout slaughterhouse. In the Olifants Gorge, alien invasive silver carp, Hypophthalmychthys molitrix (Valenciennes), seasonally migrate upstream out of Lake Massingir to spawn. This schooling species is an obligate phytoplankton feeder with consequent high levels of adipose tissue n-3 polyunsaturated fatty acids. In the Olifants Gorge, at least, this may explain seasonal exposure to levels of polyunsaturated fats in the diets of catfish and crocodiles to which these animals are not adapted. The possible roles of

  4. Prevalence of pansteatitis in African sharptooth catfish, Clarias gariepinus (Burchell), in the Kruger National Park, South Africa.

    PubMed

    Huchzermeyer, K David A

    2012-01-01

    Pansteatitis was confirmed in sharptooth catfish, Clarias gariepinus (Burchell), from three main locations within the Kruger National Park (KNP); the Olifants River Gorge, Engelhard Dam on the Letaba River and from the Sabie River in the Sabiepoort. An increasing prevalence of pansteatitis was observed in catfish during repeated samplings from the Olifants Gorge from 2009 to 2011 and co-existence of old and recent lesions indicated on-going incitement of pansteatitis. Only a low prevalence of pansteatitis was observed in catfish sampled from the Olifants River upstream of the Gorge in the KNP and no pansteatitis was observed in catfish sampled from a rain-filled dam not connected to the Olifants River. Common to both the Olifants Gorge and the Sabiepoort is the damming of the rivers in Mozambique to form lakes Massingir and Corumana respectively. Anthropogenic activities resulting in potential pollution of the rivers differ greatly between these two catchments, providing argument against a primary pollution-related aetiology of the pansteatitis found at these two sites. Compared with other sites, analysis of stomach contents of catfish from the Olifants Gorge and the Sabiepoort strongly suggested that consumption of a predominantly fish diet was associated with the development of pansteatitis in these fish. In a farmed population of catfish used as positive control, development of pansteatitis could be ascribed to consumption of rancid fish waste from a trout slaughterhouse. In the Olifants Gorge, alien invasive silver carp, Hypophthalmychthys molitrix (Valenciennes), seasonally migrate upstream out of Lake Massingir to spawn. This schooling species is an obligate phytoplankton feeder with consequent high levels of adipose tissue n-3 polyunsaturated fatty acids. In the Olifants Gorge, at least, this may explain seasonal exposure to levels of polyunsaturated fats in the diets of catfish and crocodiles to which these animals are not adapted. The possible roles of

  5. Major Mid-Miocene Climate Change In The Transantarctic Mountains

    NASA Astrophysics Data System (ADS)

    Ashworth, A. C.; Lewis, A. R.; Marchant, D. R.

    2007-12-01

    Independent lines of evidence from paleoecology, glacial geology and marine isotopes indicate major climate change in the Dry Valley sector of the Transantarctic Mountains (TAM) at c.14 Ma. A fossil assemblage of pollen and spores, freshwater diatoms, ostracods, mosses, and insect remains has been recovered from lacustrine sediments preserved in a small morainic lake basin in the western Olympus Range. The diatom assemblage indicates that the lake existed for >103yr and was ice-free during summers. Based on the moss and insect fossils the minimum mean summer temperature (MST- Dec-Feb) was 2°C but could have been as high as 5°C. Today at the site the MST is c. -15°C. The lake-marginal vegetation was a sparse tundra dominated by mosses and liverworts. Based on pollen, Nothofagus (southern beech) was part of the lowland regional vegetation and individual dwarfed shrubs may have grown on the slopes surrounding the lake basin. The age of the deposits is well-constrained by an 40Ar/39Ar age of 14.11 ± 0.11 Ma from an in situ volcanic ash within related lacustrine sediments. Based on an independent study of the glacial stratigraphy of the western Wright and McKelvey valleys, diamictites of a wet-based glacial regime had been replaced by those of cold-based regime by 13.85 ± 0.03 Ma. The drop in temperatures and the cessation of meltwater at c. 14 Ma would have caused the regional extinction of all plant and insect life with the exception of the hardiest of soil-dwelling organisms. Paleobotanical evidence indicates that Antarctica had likely been vegetated throughout the Cenozoic, with forests replaced by tundra during the early Oligocene. The mid-Miocene extinction marks the end of tundra in the interior of Antarctica and its replacement by the polar desert biota which exists today. Changes in δ18O and Mg/Ca ratios from different sectors of the Southern Ocean indicate sea surface temperature cooling and ice sheet growth between 13.8 - 14.2 Ma. The close correlation

  6. First Miocene rodent from Lebanon provides the 'missing link' between Asian and African gundis (Rodentia: Ctenodactylidae).

    PubMed

    López-Antoñanzas, Raquel; Knoll, Fabien; Maksoud, Sibelle; Azar, Dany

    2015-08-07

    Ctenodactylinae (gundis) is a clade of rodents that experienced, in Miocene time, their greatest diversification and widest distribution. They expanded from the Far East, their area of origin, to Africa, which they entered from what would become the Arabian Peninsula. Questions concerning the origin of African Ctenodactylinae persist essentially because of a poor fossil record from the Miocene of Afro-Arabia. However, recent excavations in the Late Miocene of Lebanon have yielded a key taxon for our understanding of these issues. Proafricanomys libanensis nov. gen. nov. sp. shares a variety of dental characters with both the most primitive and derived members of the subfamily. A cladistic analysis demonstrates that this species is the sister taxon to a clade encompassing all but one of the African ctenodactylines, plus a southern European species of obvious African extraction. As such, Proafricanomys provides the 'missing link' between the Asian and African gundis.

  7. Relation of peralkaline magmatism to heterogeneous extension during the Middle Miocene, southeastern Nevada

    USGS Publications Warehouse

    Scott, R.B.

    1995-01-01

    Volcanism migrated southward in the northern Basin and Range province in the Oligocene and early Miocene to produce voluminous calcalkaline silicic ash flow tuffs. Alkaline volcanism became dominant by middle Miocene (17-14 Ma) as smaller volumes of rhyolite-trachyte-basalt suites were erupted from the relatively small Kane Springs Wash caldera complex in southeastern Nevada. Only minor extension affected the Kane Wash area before the end of calcalkaline activity, but extension expressed by rate of progressive stratal tilt peaked (15-13.5 Ma) with peralkaline magmatism (14.7-14.4 Ma). Variations in distribution, degree, style, and timing of deformation demonstrate heterogeneous extension in the Kane Wash area. Only minor extension and tilting persisted post-middle Miocene (<12 Ma). All major eruptive sources overlap domains of rapid extension. -from Authors

  8. First Miocene rodent from Lebanon provides the 'missing link' between Asian and African gundis (Rodentia: Ctenodactylidae)

    PubMed Central

    López-Antoñanzas, Raquel; Knoll, Fabien; Maksoud, Sibelle; Azar, Dany

    2015-01-01

    Ctenodactylinae (gundis) is a clade of rodents that experienced, in Miocene time, their greatest diversification and widest distribution. They expanded from the Far East, their area of origin, to Africa, which they entered from what would become the Arabian Peninsula. Questions concerning the origin of African Ctenodactylinae persist essentially because of a poor fossil record from the Miocene of Afro-Arabia. However, recent excavations in the Late Miocene of Lebanon have yielded a key taxon for our understanding of these issues. Proafricanomys libanensis nov. gen. nov. sp. shares a variety of dental characters with both the most primitive and derived members of the subfamily. A cladistic analysis demonstrates that this species is the sister taxon to a clade encompassing all but one of the African ctenodactylines, plus a southern European species of obvious African extraction. As such, Proafricanomys provides the 'missing link' between the Asian and African gundis. PMID:26250050

  9. Oligocene-Miocene biostratigraphy, magnetostratigraphy, and isotopic stratigraphy of the western North Atlantic

    NASA Astrophysics Data System (ADS)

    Miller, Kenneth G.; Aubry, Marie-Pierre; Khan, M. J.; Melillo, A. J.; Kent, D. V.; Berggren, W. A.

    1985-04-01

    Magnetostratigraphic records from western North Atlantic Deep Sea Drilling Project (DSDP) Sites 563 and 558 are correlated with the geomagnetic polarity time scale (GPTS; Berggren et al., 1984a, 1984b) using marine magnetic anomalies and selected biostratigraphic datum levels. The magnetochronology established is used to make direct magnetobiostratigraphic correlations that agree with previous Oligocene early Miocene studies. However, we show that Zones NN8 partim and NN9 and associated Epoch 11 correlate with Magnetic Anomaly 5 (= Chron C5n). This contrasts with previous indirect correlations of Epoch 11 with Anomaly 5A and requires an upward adjustment of 1.5 2.0 m.y. for middle late Miocene calcareous nannofossil zones. We correlate the middle/late Miocene boundary with Zone NN8 and earliest Chron C5n (10.4 Ma). *Present address: Peshawar University, Peshawar, Pakistan

  10. Miocene non-marine diatoms from the western Cordillera basins of northern Peru

    USGS Publications Warehouse

    Fourtanier, E.; Gasse, F.; Bellier, O.; Bonhomme, M.G.; Robles, I.

    1993-01-01

    Diatom assemblages are documented from diatomite layers of two Miocene fluvio-lacustrine units from the basins of the western Cordillera of northern Peru: the Namora Formation and the Cajabamba Formation. Emphasis is given to taxa of particular stratigraphic interest. The diatom assemblages indicate for the Namora Formation the occurrence of swampy conditions with very dilute, low alkalinity water. The diatom assemblages of the Cajabamba Formation reflect the occurrence of fresh, slightly alkaline, eutrophic lakes with deep water in some samples, and swampy conditions with relatively high salt content in other samples. The Namora formation is late Miocene in age based on the diatom assemblages and radiometric analyses. The diatom layers of the Cajabamba Formation are dated as late middle to early late Miocene. -from Authors

  11. The thumb of Miocene apes: new insights from Castell de Barberà (Catalonia, Spain).

    PubMed

    Almécija, Sergio; Alba, David M; Moyà-Solà, Salvador

    2012-07-01

    Primate hands display a major selective compromise between locomotion and manipulation. The thumb may or may not participate in locomotion, but it plays a central role in most manipulative activities. Understanding whether or not the last common ancestor of humans and Pan displayed extant-ape-like hand proportions (i.e., relatively long fingers and a short thumb) can be clarified by the analysis of Miocene ape hand remains. Here we describe new pollical remains-a complete proximal phalanx and a partial distal phalanx-from the middle/late Miocene site of Castell de Barberà (ca., 11.2-10.5 Ma, Vallès-Penedès Basin), and provide morphometric and qualitative comparisons with other available Miocene specimens as well as extant catarrhines (including humans). Our results show that all available Miocene taxa (Proconsul, Nacholapithecus, Afropithecus, Sivapithecus, Hispanopithecus, Oreopithecus, and the hominoid from Castell de Barberà) share a similar phalangeal thumb morphology: the phalanges are relatively long, and the proximal phalanges have a high degree of curvature, marked insertions for the flexor muscles, a palmarly bent trochlea and a low basal height. All these features suggest that these Miocene apes used their thumb with an emphasis on flexion, most of them to powerfully assist the fingers during above-branch, grasping arboreal locomotion. Moreover, in terms of relative proximal phalangeal length, the thumb of Miocene taxa is intermediate between the long-thumbed humans and the short-thumbed extant apes. Together with previous evidence, this suggests that a moderate-length hand with relatively long thumb-involved in locomotion-is the original hand morphotype for the Hominidae.

  12. Hormone responsiveness of isolated catfish hepatocytes in perifusion system is higher than in flasks incubation.

    PubMed

    Ottolenghi, C; Puviani, A C; Fabbri, E; Capuzzo, A; Brighenti, L; Plisetskaya, E M

    1994-07-01

    Hepatocytes were isolated from catfish (lctalurus melas) by conventional collagenase digestion. Sensitivities of liver cells isolated from the same fish to the glycogenolytic action of epinephrine, mammalian glucagon, catfish glucagon, catfish glucagon-like peptide, synthetic fragment 19-29 of anglerfish glucagon I, fragment 19-29 of anglerfish glucagon II, and anglerfish glucagon II were compared in two different systems: perifusion in a Bio-Gel P4 column and flask incubation. Both experimental procedures were continued for a total of 100-120 min, while hormones were applied simultaneously to both preparations for 10 min. Effluent fractions from the columns and incubation media from the flasks were collected for glucose determination. The hormonal effects were clearly enhanced in perifused cells compared to those in cells incubated in flasks, the effect being especially evident at physiological concentrations of hormones. The hormonal effects in both systems were dose-dependent. Epinephrine and mammalian glucagon (10 nM), applied separately to the same column, produced two different peaks, glucagon causing more glucose production than epinephrine. In the presence of 0.4 mM glucose in the perifusion system, hormonal effects were diminished, implying that glucose accumulation during incubation of liver cells in flasks might affect hormonal effects. The results obtained in this study indicate that piscine hepatocytes suspended and perifused in a Bio-Gel column are more sensitive to physiological concentrations of glycogenolytic hormones and may represent a new tool for experimental studies of fish liver metabolism and its hormonal regulation. PMID:7926655

  13. Does the Hearing Sensitivity in Thorny Catfishes Depend on Swim Bladder Morphology?

    PubMed Central

    Zebedin, Angelika; Ladich, Friedrich

    2013-01-01

    Background Thorny catfishes exhibit large variations in swim bladder morphology. These organs are of different sizes, forms and may have simple or branched diverticula. The swim bladder plays an important role in otophysans because it enhances their hearing sensitivity by transmitting sound pressure fluctuations via ossicles to the inner ear. Methodology/Principal Findings To investigate if a form-function relationship exists, the swim bladder morphology and hearing ability were analyzed in six species. The morphology was quantified by measuring the length, width and height and calculating a standardized swim bladder length (sSBL), which was then used to calculate the relative swim bladder length (rSBL). Hearing was measured using the auditory evoked potential (AEP) recording technique. Two species had simple apple-shaped and four species heart-shaped (cordiform) bladders. One of the latter species had short unbranched diverticula on the terminal margin, two had a secondary bladder and two had many long, branched diverticula. The rSBL differed significantly between most of the species. All species were able to detect frequencies between 70 Hz and 6 kHz, with lowest thresholds found between 0.5 and 1 kHz (60 dB re 1 µPa). Hearing curves were U-shaped except in Hemidoras morrisi in which it was ramp-like. Mean hearing thresholds of species possessing smaller rSBLs were slightly lower (maximum 8.5 dB) than those of species having larger rSBLs. Conclusions/Significance The current findings reveal a relationship between swim bladder form and its function among thorny catfishes. Relatively smaller swim bladders resulted in relatively better hearing. This is in contrast to a prior inter-familial study on catfishes in which species with large unpaired bladders possessed higher sensitivity at higher frequencies than species having tiny paired and encapsulated bladders. PMID:23825615

  14. Environmental hypertonicity causes induction of gluconeogenesis in the air-breathing singhi catfish, Heteropneustes fossilis.

    PubMed

    Das, Manas; Banerjee, Bodhisattwa; Choudhury, Mahua G; Saha, Nirmalendu

    2013-01-01

    The air-breathing singhi catfish (Heteropneustes fossilis) is frequently being challenged by different environmental insults such as hyper-ammonia, dehydration and osmotic stresses in their natural habitats throughout the year. The present study investigated the effect of hyperosmotic stress, due to exposure to hypertonic environment (300 mM mannitol) for 14 days, on gluconeogenesis in this catfish. In situ exposure to hypertonic environment led to significant stimulation of gluconeogenic fluxes from the perfused liver after 7 days of exposure, followed by further increase after 14 days in presence of three different potential gluconeogenic substrates (lactate, pyruvate and glutamate). Environmental hypertonicity also caused a significant increase of activities of key gluconeogenic enzymes, namely phosphoenolpyruvate carboxykinase, fructose 1, 6-bisphosphatase and glucose 6-phosphatase by about 2-6 fold in liver, and 3-6 fold in kidney tissues. This was accompanied by more abundance of enzyme proteins by about 1.8-3.7 fold and mRNAs by about 2.2-5.2 fold in both the tissues with a maximum increase after 14 days of exposure. Hence, the increase in activities of key gluconeogenic enzymes under hypertonic stress appeared to be as a result of transcriptional regulation of genes. Immunocytochemical analysis further confirmed the tissue specific localized expression of these enzymes in both the tissues with the possibility of expressing more in the same localized places. The induction of gluconeogenesis during exposure to environmental hypertonicity possibly occurs as a consequence of changes in hydration status/cell volume of different cell types. Thus, these adaptational strategies related to gluconeogenesis that are observed in this catfish under hypertonic stress probably help in maintaining glucose homeostasis and also for a proper energy supply to support metabolic demands mainly for ion transport and other altered metabolic processes under various environmental

  15. Optimizing de novo transcriptome assembly and extending genomic resources for striped catfish (Pangasianodon hypophthalmus).

    PubMed

    Thanh, Nguyen Minh; Jung, Hyungtaek; Lyons, Russell E; Njaci, Isaac; Yoon, Byoung-Ha; Chand, Vincent; Tuan, Nguyen Viet; Thu, Vo Thi Minh; Mather, Peter

    2015-10-01

    Striped catfish (Pangasianodon hypophthalmus) is a commercially important freshwater fish used in inland aquaculture in the Mekong Delta, Vietnam. The culture industry is facing a significant challenge however from saltwater intrusion into many low topographical coastal provinces across the Mekong Delta as a result of predicted climate change impacts. Developing genomic resources for this species can facilitate the production of improved culture lines that can withstand raised salinity conditions, and so we have applied high-throughput Ion Torrent sequencing of transcriptome libraries from six target osmoregulatory organs from striped catfish as a genomic resource for use in future selection strategies. We obtained 12,177,770 reads after trimming and processing with an average length of 97bp. De novo assemblies were generated using CLC Genomic Workbench, Trinity and Velvet/Oases with the best overall contig performance resulting from the CLC assembly. De novo assembly using CLC yielded 66,451 contigs with an average length of 478bp and N50 length of 506bp. A total of 37,969 contigs (57%) possessed significant similarity with proteins in the non-redundant database. Comparative analyses revealed that a significant number of contigs matched sequences reported in other teleost fishes, ranging in similarity from 45.2% with Atlantic cod to 52% with zebrafish. In addition, 28,879 simple sequence repeats (SSRs) and 55,721 single nucleotide polymorphisms (SNPs) were detected in the striped catfish transcriptome. The sequence collection generated in the current study represents the most comprehensive genomic resource for P. hypophthalmus available to date. Our results illustrate the utility of next-generation sequencing as an efficient tool for constructing a large genomic database for marker development in non-model species. PMID:25979246

  16. Genetic variation at mtDNA and microsatellite loci in Chinese longsnout catfish (Leiocassis longirostris).

    PubMed

    Yang, Guang; Xiao, Mingsong; Yu, Yanyan; Xu, Shixia

    2012-04-01

    Genetic variability and population structure of the Chinese longsnout catfish Leiocassis longirostris Günther in the Yangtze River was examined with mitochondrial control region sequences and nuclear microsatellite markers. A 705-bp segment of the mitochondrial DNA control region was sequenced from 132 samples, which identified a total of 61 haplotypes. The Chinese longsnout catfish in the Yangtze River was characterized with high haplotype diversity (h = 0.9770 ± 0.0041) but low nucleotide diversity (π = 0.0081 ± 0.0043). Median-joining network analysis revealed a star-shaped pattern and mismatch distribution analysis found a smooth unimodal distribution, which suggested that this species in the Yangtze River underwent a population expansion following bottlenecks and/or they originated from a small size of founding population. It was estimated that the possible time of population expansion was 139,000-435,000 years before present, a time period in the middle Pleistocene. The analysis of molecular variance and phylogenetic reconstructions did not detect significant geographic structure between different river sections. This pattern of genetic variation was further evidenced with nuclear microsatellite markers. The genetic differentiation between above and below the Gezhouba Dam and Three Gorges Dam is very small at mitochondrial and nuclear levels, which suggested that these recently developed dams might have not significantly resulted in population genetic fragmentation in the Chinese longsnout catfish. However, the potential exacerbation of genetic structuring by the dams should not be overlooked in the future. PMID:21947845

  17. An age for Kajong, a Miocene fossil site east of Lake Turkana, Kenya

    NASA Astrophysics Data System (ADS)

    Brown, Francis H.; Jicha, Brian R.; Leakey, R. E.

    2016-02-01

    The Kajong Formation in Marsabit District, northern Kenya has yielded a Miocene mammalian fauna consisting of nine taxa. It is capped by a basalt 40Ar/39Ar dated at 19.1 ± 0.1 Ma, and a volcanic clast from a conglomerate within the formation yielded an age of 20.3 Ma, only slightly older. The entire fauna from this site thus lies close to the base of the Miocene Epoch and is older than 19.2 Ma. The site has yielded some of the oldest examples of Archaeobelodon filholi, Prodeinotherium hobleyi, and Gomphotherium sp. in east Africa.

  18. A giant termite from the Late Miocene of Styria, Austria (Isoptera)

    NASA Astrophysics Data System (ADS)

    Engel, Michael S.; Gross, Martin

    2009-02-01

    A giant termite is described and figured from the Late Miocene of the Styrian Basin in southeastern Austria. Gyatermes styriensis gen. n. et sp. n. is represented by a relatively complete forewing, with basal scale. The fossil approximates in size the largest of all termites today and is the largest fossil termite on record. The presence of this species in the Late Miocene fauna of Europe indicates that climatic conditions were appropriate for the persistence of species and colonies requiring relatively stable, warm conditions. The genus is primitive in overall features but shares some similarity with the dampwood termites.

  19. Upper Miocene-Eopleistocene terrestrial sediments of the northwestern Ciscaucasia region

    NASA Astrophysics Data System (ADS)

    Beluzhenko, E. V.; Pis'mennaya, N. S.

    2016-07-01

    On the basis of their stratigraphic, lithological, and genetic features, the Upper Miocene-Eopleistocene terrestrial sediments of the northwestern Ciscaucasia region are subdivided into the following local stratigraphic units (formations): Azov-Kuban, Srednyaya Kuban, Novoaleksandrovsk, Temizhbekskaya. The paleontological and paleomagnetic data are used for determining or specifying their age and correlating the formations between each other and with the regional stratigraphic scale. The obtained data make it possible to improve the Upper Miocene-Eopleistocene stratigraphic scale of the northwestern Ciscaucasia region.

  20. Stratigraphical investigations on a new Miocene fossil-bearing sequence in Central Inner Mongolia, China

    NASA Astrophysics Data System (ADS)

    Kaakinen, Anu; Aziz, Hayfaa Abdul; Passey, Benjamin H.; Zhang, Zhaoqun; Liu, Liping; Krijgsman, Wout; Fortelius, Mikael

    2014-05-01

    Central Inner Mongolia has been an area of great paleontological interest since the beginning of the 20th century. Although the area has produced numerous diverse collections of Miocene faunas, fossil records from the early Miocene of Inner Mongolia are relatively rare. The localities occur mainly as scattered faunal horizons and their stratigraphy is challenging owing to lack of continuous vertical exposures. Consequently, most age estimations of these Miocene sites are based on paleontological evidence alone, with very few sites having been dated independently based on paleomagnetics. The Damiao site in Siziwang Qi, Inner Mongolia, was discovered in 2006, and during the following four years extensive field activities were undertaken. The focus was on paleontological studies and on the stratigraphy of the Neogene sediments. The field survey led to the recovery of approximately 30 new fossiliferous localities, which have produced a rich mammalian fauna, including pliopithecid remains. The bulk of the vertebrate fossils and localities have been recovered from three main fossil horizons. We have interpreted the Damiao sequence as the remains of a fluvio-lacustrine system comprising channels, subaerially exposed floodplains and ephemeral/marginal lacustrine environments. This study presents the litho- and magnetostratigraphy of the Damiao area and provides age estimations for the important fossil-bearing localities. The two local stratigraphic sections measured and sampled for paleomagnetic analysis coincide with important vertebrate fossil localities. The western section is about 30 m thick and includes fossil locality DM16 while the eastern section spans up 40 m and comprises localities DM01 and DM02. The paleomagnetic results and faunal evidence suggest a correlation in the magnetozones C6Ar through C5r with an age range of ca 21 to 11 Ma. The interval of reversed polarity at the base of the section (C6Ar) coincides with fossil locality DM16. The pliopithecid

  1. Renal excretion in channel catfish following injection of quinaldine sulphate or 3-trifluoromethyl-4-nitrophenol

    USGS Publications Warehouse

    Allen, J.L.; Hunn, J.B.

    1977-01-01

    Channel catfish, Ictalurus punctatus Rafinesque, injected intraperitoneally with 2-methyl-quinoline sulphate (QdSO4) or 3-trifluoromethyl-4-nitrophenol (TFM) eliminate most of the dose of these compounds by extra-renal routes. Patterns of renal excretion of Na+, K+, Ca2+, Mg2+, and Cl- (pEq kg-1 h-1) appeared to be associated with the 'stress' of the urine collection technique rather than with the elimination of either compound. Concentrations of Na+, K+, Ca2+, Mg2+, and Cl- (mEq/1) were determined in urine, plasma and gall bladder bile.

  2. A new species of torrent catfish, Liobagrus hyeongsanensis (Teleostei: Siluriformes: Amblycipitidae), from Korea.

    PubMed

    Kim, Su-Hwan; Kim, Hyeong-Su; Park, Jong-Young

    2015-01-01

    A new species of torrent catfish, Liobargus hyeongsanensis, is described from rivers and tributaries of the southeastern coast of Korea. The new species can be differentiated from its congeners by the following characteristics: a small size with a maximum standard length (SL) of 90 mm; body and fins entirely brownish-yellow without distinct markings; a relatively short pectoral spine (3.7-6.5 % SL); a reduced body-width at pectoral-fin base (15.5-17.9 % SL); 50-54 caudal-fin rays; 6-8 gill rakers; 2-3 (mostly 3) serrations on pectoral fin; 60-110 eggs per gravid female. PMID:26623807

  3. Effects of diphenyl diselenide on growth, oxidative damage, and antioxidant response in silver catfish.

    PubMed

    Menezes, Charlene; Marins, Aline; Murussi, Camila; Pretto, Alexandra; Leitemperger, Jossiele; Loro, Vania Lucia

    2016-01-15

    The aim of this study was to evaluate the effects of dietary diphenyl diselenide [(PhSe)2] at different concentrations (1.5, 3.0, and 5.0 mg/kg) on growth, oxidative damage and antioxidant parameters in silver catfish after 30 and 60 days. Fish fed with 5.0 mg/kg of (PhSe)2 experienced a significant decrease in weight, length, and condition factor after 30 days and these parameters increased after 60 days. Thiobarbituric acid reactive substances (TBARS) and protein carbonyl (PC) decreased in the liver of silver catfish supplemented with (PhSe)2 after 30 days at all concentrations, while after 60 days these parameters decreased in liver, gills, brain, and muscle. Supplementation with (PhSe)2 induced a decrease in catalase (CAT) activity from liver only after 60 days of feeding. Superoxide dismutase (SOD) decreased at 5.0 mg/kg after 30 and 60 days and glutathione peroxidase (GPx) was enhanced at 1.5 and 3.0 mg/kg after 30 and 60 days. Silver catfish supplemented for 30 days showed a significant increase in liver glutathione S-transferase (GST) at 3.0 mg/kg, while after 60 days GST activity increased in liver at 1.5, 3.0, and 5.0 mg/kg and in gills at 3.0 and 5.0 mg/kg of (PhSe)2. After 30 days, non-protein thiols (NPSH) did not change, while after 60 days NPSH increased in liver, gills, brain, and muscle. In addition, ascorbic acid (AA) levels after 30 days increased in liver at three concentrations and in gills and muscle at 1.5 mg/kg, while after 60 days, AA increased at all concentrations in all and tissues tested. Thus, diet supplemented with (PhSe)2 for 60 days could be more effective for silver catfish. Although the concentration of 5.0 mg/kg showed decreased growth parameters, concentrations of 1.5 and 3.0 mg/kg, in general, decreased oxidative damage and increased antioxidant defenses. PMID:26520260

  4. Evaluation of red seaweed Gracilaria arcuata as dietary ingredient in African catfish, Clarias gariepinus.

    PubMed

    Al-Asgah, Nasser A; Younis, El-Sayed M; Abdel-Warith, Abdel-Wahab A; Shamlol, Faozi S

    2016-03-01

    The aim of this study was to evaluate the use of dried marine seaweed, Gracilaria arcuata for the first time as dietary ingredient in partial substitution of fishmeal on the growth performance, feed utilization and body composition of African catfish, Clarias gariepinus. Four experimental diets were formulated: D1 as a control group; D2; D3 and D4 which included 10%, 20% and 30% G. arcuata meal respectively. One hundred and eighty African catfish weighing 9.62 ± 0.42 g, (mean ± SE) was divided into four groups corresponding to the different feeding regimes. The final body weight of the fishes showed significant differences (P < 0.05) between the control (D1); D2 and other treated groups D3 and D4, with weights of 66.98, 59.60, 47.34 and 30.73 g recorded for D1, D2, D3 and D4, respectively. Significant differences (P < 0.05) were also evident in weight gain, specific growth rate, and feed utilization between treatment and control groups. However, no significant differences (P > 0.05) were observed between the control group and fishes fed D2 for all previous parameters. Protein productive value, protein efficiency ratio, daily dry feed intake and total feed intake were also significantly lower in fish fed with a diet containing G. arcuata than in the control group and D2 which contains 10% of G. arcuata. Overall, the results of the experiment revealed that African catfish fed a diet with G. arcuata included in 20% and 30% levels showed poorer growth and feed utilization than the control group and D2. However, the study recommended that C. gariepinus can accept this ingredient up to 10% in their diets. More defined experiments therefore seem to be necessary in order to determine the maximum level of this marine seaweed in diets with amino acid supplementation for African catfish.

  5. Evaluation of red seaweed Gracilaria arcuata as dietary ingredient in African catfish, Clarias gariepinus

    PubMed Central

    Al-Asgah, Nasser A.; Younis, El-Sayed M.; Abdel-Warith, Abdel-Wahab A.; Shamlol, Faozi S.

    2015-01-01

    The aim of this study was to evaluate the use of dried marine seaweed, Gracilaria arcuata for the first time as dietary ingredient in partial substitution of fishmeal on the growth performance, feed utilization and body composition of African catfish, Clarias gariepinus. Four experimental diets were formulated: D1 as a control group; D2; D3 and D4 which included 10%, 20% and 30% G. arcuata meal respectively. One hundred and eighty African catfish weighing 9.62 ± 0.42 g, (mean ± SE) was divided into four groups corresponding to the different feeding regimes. The final body weight of the fishes showed significant differences (P < 0.05) between the control (D1); D2 and other treated groups D3 and D4, with weights of 66.98, 59.60, 47.34 and 30.73 g recorded for D1, D2, D3 and D4, respectively. Significant differences (P < 0.05) were also evident in weight gain, specific growth rate, and feed utilization between treatment and control groups. However, no significant differences (P > 0.05) were observed between the control group and fishes fed D2 for all previous parameters. Protein productive value, protein efficiency ratio, daily dry feed intake and total feed intake were also significantly lower in fish fed with a diet containing G. arcuata than in the control group and D2 which contains 10% of G. arcuata. Overall, the results of the experiment revealed that African catfish fed a diet with G. arcuata included in 20% and 30% levels showed poorer growth and feed utilization than the control group and D2. However, the study recommended that C. gariepinus can accept this ingredient up to 10% in their diets. More defined experiments therefore seem to be necessary in order to determine the maximum level of this marine seaweed in diets with amino acid supplementation for African catfish. PMID:26981001

  6. Identification of Skeletal Deformities in Far Eastern Catfish, Silurus asotus under Indoor Aquaculture Condition.

    PubMed

    Yang, Won Seok; Gil, Hyun Woo; Yoo, Gwang Yeol; Park, In-Seok

    2015-09-01

    For the 2 years of farming, at the indoor circulating aquaculture system, four kinds of skeletal deformities were found among 60 Far Eastern catfish, Silurus asotus. Deformities saw jawbone's luxation, abnormality of upper lip and malocclusion. Spinal deformity was most fatal deformities with low weight and small length. Jawbone's luxation had 1 maxilla and 2 mandibles. Abnormality of upper lip had just lip was back over. Malocclusion's left maxilla and right maxilla were not balanced. This experiment was any deformities in this species through the deformity can grasp how it affects.

  7. Interaction between dietary levels of victamin C and E on growth and immune responses in channel catfish, Ictalurus punctatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This study was conducted to evaluate the effect of dietary levels of vitamins C and E on growth performance, liver contents of vitamins C and E, hematology and immune response of channel catfish, Ictalurus punctatus. A basal practical diet containing 32% protein and 2,900 kcal DE kg-1 was supplemen...

  8. Effects of Ichthyophthirius multifiliis parasitism on the survival, hematology and bacterial load in channel catfish previously exposed to Edwardsiella ictaluri

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The effect of Ichthyophthirius multifiliis (Ich) parasitism on survival, hematology and bacterial load in channel catfish, Ictalurus punctatus, previously exposed to Edwardsiella ictaluri was studied. Fish were exposed to E. ictaluri one day prior to Ich in the following treatments: 1)- infected by...

  9. Comparative catfish macrophage function in families expressing high and low survivor phenotype following experimental challenge with Edwardsiella ictaluri

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Two channel catfish families were identified as displaying a high (>90%) or low (<10%) survival phenotype in repeated experimental challenge with Edwardsiella ictaluri. In order to gain understanding of the biological basis of these phenotypes, primary macrophages were prepared from head kidney tiss...

  10. Reduction of the pectoral spine and girdle in domesticated Channel catfish is likely caused by changes in selection pressure.

    PubMed

    Fine, Michael L; Lahiri, Shweta; Sullivan, Amanda D H; Mayo, Mark; Newton, Scott H; Sismour, Edward N

    2014-07-01

    Locked pectoral spines of the Channel Catfish Ictalurus punctatus more than double the fish's width and complicate ingestion by gape-limited predators. The spine mates with the pectoral girdle, a robust structure that anchors the spine. This study demonstrates that both spine and girdle exhibit negative allometric growth and that pectoral spines and girdles are lighter in domesticated than in wild Channel Catfish. This finding could be explained by changes in selection pressure for spine growth during domestication or by an epigenetic effect in which exposure to predators in wild fish stimulates pectoral growth. We tested the epigenetic hypothesis by exposing domesticated Channel Catfish fingerlings to Largemouth Bass Micropterus salmoides predators for 13 weeks. Spines and girdles grow isometrically in the fingerlings, and regression analysis indicates no difference in proportional pectoral growth between control and predator-exposed fish. Therefore a change in selection pressure likely accounts for smaller pectoral growth in domesticated Channel Catfish. Decreasing spine growth in older fish suggests anti-predator functions are most important in smaller fish. Additionally, growth of the appendicular and axial skeleton is controlled differentially, and mechanical properties of the spine and not just its length are an important component of this defensive adaptation.

  11. Effects of a phytogenic feed additive on susceptibility of channel catfish to Edwardsiella ictaluri and levels of mannose binding lectin

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A study was conducted to investigate the effect of a phytogenic feed additive (Digestarom® P.E.P. MGE) on growth performance and disease susceptibility to Edwardsiella ictaluri. Two hundred and fifty juvenile channel catfish (7.2 ± 0.1 g) were allotted into the following treatments: Control (float...

  12. Identification and characterization of matrix metalloproteinase-13 sequence structure and expression during embryogenesis and infection in channel catfish (Ictalurus punctatus)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Matrix metalloproteinase-13 (MMP-13), referred to as collagenase-3, is a proteolytic enzyme that plays a key role in degradation and remodelling of host extracellularmatrix proteins. The objective of this study was to characterize the MMP-13 gene in channel catfish, and to determine its pattern of e...

  13. Reduction of the pectoral spine and girdle in domesticated Channel catfish is likely caused by changes in selection pressure.

    PubMed

    Fine, Michael L; Lahiri, Shweta; Sullivan, Amanda D H; Mayo, Mark; Newton, Scott H; Sismour, Edward N

    2014-07-01

    Locked pectoral spines of the Channel Catfish Ictalurus punctatus more than double the fish's width and complicate ingestion by gape-limited predators. The spine mates with the pectoral girdle, a robust structure that anchors the spine. This study demonstrates that both spine and girdle exhibit negative allometric growth and that pectoral spines and girdles are lighter in domesticated than in wild Channel Catfish. This finding could be explained by changes in selection pressure for spine growth during domestication or by an epigenetic effect in which exposure to predators in wild fish stimulates pectoral growth. We tested the epigenetic hypothesis by exposing domesticated Channel Catfish fingerlings to Largemouth Bass Micropterus salmoides predators for 13 weeks. Spines and girdles grow isometrically in the fingerlings, and regression analysis indicates no difference in proportional pectoral growth between control and predator-exposed fish. Therefore a change in selection pressure likely accounts for smaller pectoral growth in domesticated Channel Catfish. Decreasing spine growth in older fish suggests anti-predator functions are most important in smaller fish. Additionally, growth of the appendicular and axial skeleton is controlled differentially, and mechanical properties of the spine and not just its length are an important component of this defensive adaptation. PMID:24673385

  14. HISTOPATHOLOGICAL EVIDENCE OF REGENERATION FOLLOWING HEPATOTOXIC EFFECTS OF THE CYANOTOXIN MICROCYSTIN-LR IN THE HARDHEAD CATFISH AND GULF KILLIFISH.

    EPA Science Inventory

    The cyanobacterial toxin, microcystin-LR (MC-LR), causes liver damage in several freshwater fish species. The damage appears to be acute and irreversible. In the present study, two estuarine species, hardhead catfish, Arius felis, and gulf killifish, Fundulus grandis, were inject...

  15. Rapid screening of oxytetracycline residue in catfish muscle by dispersive liquid-liquid microextraction and europium-sensitized luminescence

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Oxytetracycline (OTC) residue in catfish muscle was screened by dispersive liquid-liquid microextraction (DLLME) and europium-sensitized luminescence (ESL). After extraction in EDTA, HCl, and acetonitrile, cleanup was carried out by DLLME, and ESL was measured at microgram = 385 nm and wavelength = ...

  16. Efficacy of crystalline lysine in alternative diets for pond-raised hybrid catfish, female Ictalurus punctatus X male Ictalurus furcatus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    study was conducted to examine the efficacy of crystalline lysine in alternative diets for pond-raised hybrid catfish, ' Ictalurus punctatus × ' Ictalurus furcatus. Two 28% protein alternative diets supplemented with l-lysine HCl at the required level based on 62% (previously published value) or 10...

  17. Effect of preservatives on microbial safety and quality of smoked blue catfish (Ictalurus furcatus) steaks during room-temperature storage.

    PubMed

    da Silva, Ligia V Antonia; Prinyawiwatkul, Witoon; King, Joan M; No, Hong Kyoon; Bankston, Joseph D; Ge, Beilei

    2008-12-01

    The microbial safety and quality of smoked blue catfish (Ictalurus furcatus) steaks treated with antimicrobials and antioxidants were examined during 6-week ambient storage. Five pre-smoking soaking treatments were applied: 25% NaCl and 1% ascorbic acid for 30 min or 1h, 3% sodium lactate with or without 5% rosemary extract for 30 min, and 5% sorbic acid alone for 30 min. After smoking, cooled catfish steaks were packed and analyzed at 0, 2, 4, and 6 weeks of ambient storage. Neither Listeria nor Salmonella was recovered from the smoked catfish steaks. Significant reductions (P<0.05) in total plate counts were observed in all treated samples, with those treated with 3% sodium lactate carrying the lowest microbial load. The rosemary extract-treated samples were the most stable against oxidation. All treated smoked catfish steaks had water activities less than 0.85; however, neither pH nor water activity changed significantly within each treatment group during storage (P> or 0.05). In conclusion, smoking/cooking effectively reduced microbial populations, and the use of antimicrobial agents and antioxidants, particularly 3% sodium lactate, could aid the control of microbial safety during storage, resulting in safe products for up to 6 weeks without refrigeration.

  18. Association of Cocaine- and Amphetamine-Regulated Transcript (CART) Messenger RNA Level, Food Intake, and Growth in Channel Catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cocaine-and Amphetamine-Regulated Transcript (CART) is a potent hypothalamic anorectic peptide in mammals and fish. We hypothesized that increased food intake is associated with changes in expression of CART mRNA within the brain of channel catfish. Objectives were to clone the CART gene, examine ...

  19. JAK and STAT members of yellow catfish Pelteobagrus fulvidraco and their roles in leptin affecting lipid metabolism.

    PubMed

    Wu, Kun; Tan, Xiao-Ying; Xu, Yi-Huan; Chen, Qi-Liang; Pan, Ya-Xiong

    2016-01-15

    The present study clones and characterizes the full-length cDNA sequences of members in JAK-STAT pathway, explores their mRNA tissue expression and the biological role in leptin influencing lipid metabolism in yellow catfish Pelteobagrus fulvidraco. Full-length cDNA sequences of five JAKs and seven STAT members, including some splicing variants, were obtained from yellow catfish. Compared to mammals, more members of the JAKs and STATs family were found in yellow catfish, which provided evidence that the JAK and STAT family members had arisen by the whole genome duplications during vertebrate evolution. All of these members were widely expressed across the eleven tissues (liver, white muscle, spleen, brain, gill, mesenteric fat, anterior intestine, heart, mid-kidney, testis and ovary) but at the variable levels. Intraperitoneal injection in vivo and incubation in vitro of recombinant human leptin changed triglyceride content and mRNA expression of several JAKs and STATs members, and genes involved in lipid metabolism. AG490, a specific inhibitor of JAK2-STAT pathway, partially reversed leptin-induced effects, indicating that the JAK2a/b-STAT3 pathway exerts main regulating actions of leptin on lipid metabolism at transcriptional level. Meanwhile, the different splicing variants were differentially regulated by leptin incubation. Thus, our data suggest that leptin activated the JAK/STAT pathway and increases the expression of target genes, which partially accounts for the leptin-induced changes in lipid metabolism in yellow catfish.

  20. An in vitro screening method to evaluate chemicals as potential chemotherapeutants to control Aeromonas hydrophila infection in channel catfish

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Using catfish gill cells G1B and four chemicals (hydrogen peroxide, sodium chloride, potassium permanganate, and D-mannose), the feasibility of using an in vitro screening method to identify potential effective chemotherapeutants was evaluated in this study. In vitro screening results revealed that,...