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2012-02-10

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Safety assessment of genetically modified plants with deliberately altered composition

PubMed Central

Halford, Nigel G; Hudson, Elizabeth; Gimson, Amy; Weightman, Richard; Shewry, Peter R; Tompkins, Steven

2014-01-01

The development and marketing of ‘novel’ genetically modified (GM) crops in which composition has been deliberately altered poses a challenge to the European Union (EU)'s risk assessment processes, which are based on the concept of substantial equivalence with a non-GM comparator. This article gives some examples of these novel GM crops and summarizes the conclusions of a report that was commissioned by the European Food Safety Authority on how the EU's risk assessment processes could be adapted to enable their safety to be assessed. PMID:24735114

Metabolomics of Genetically Modified Crops

PubMed Central

Simó, Carolina; Ibáñez, Clara; Valdés, Alberto; Cifuentes, Alejandro; García-Cañas, Virginia

2014-01-01

Metabolomic-based approaches are increasingly applied to analyse genetically modified organisms (GMOs) making it possible to obtain broader and deeper information on the composition of GMOs compared to that obtained from traditional analytical approaches. The combination in metabolomics of advanced analytical methods and bioinformatics tools provides wide chemical compositional data that contributes to corroborate (or not) the substantial equivalence and occurrence of unintended changes resulting from genetic transformation. This review provides insight into recent progress in metabolomics studies on transgenic crops focusing mainly in papers published in the last decade. PMID:25334064

The impacts of data constraints on the predictive performance of a general process-based crop model (PeakN-crop v1.0)

NASA Astrophysics Data System (ADS)

Caldararu, Silvia; Purves, Drew W.; Smith, Matthew J.

2017-04-01

Improving international food security under a changing climate and increasing human population will be greatly aided by improving our ability to modify, understand and predict crop growth. What we predominantly have at our disposal are either process-based models of crop physiology or statistical analyses of yield datasets, both of which suffer from various sources of error. In this paper, we present a generic process-based crop model (PeakN-crop v1.0) which we parametrise using a Bayesian model-fitting algorithm to three different sources: data-space-based vegetation indices, eddy covariance productivity measurements and regional crop yields. We show that the model parametrised without data, based on prior knowledge of the parameters, can largely capture the observed behaviour but the data-constrained model greatly improves both the model fit and reduces prediction uncertainty. We investigate the extent to which each dataset contributes to the model performance and show that while all data improve on the prior model fit, the satellite-based data and crop yield estimates are particularly important for reducing model error and uncertainty. Despite these improvements, we conclude that there are still significant knowledge gaps, in terms of available data for model parametrisation, but our study can help indicate the necessary data collection to improve our predictions of crop yields and crop responses to environmental changes.

Overview of the current status of genetically modified plants in Europe as compared to the USA.

PubMed

Brandt, Peter

2003-07-01

Genetically modified crops have been tested in 1,726 experimental releases in the EU member states and in 7,815 experimental releases in the USA. The global commercial cultivation area of genetically modified crops is likely to reach 50 million hectares in 2001, however, the commercial production of genetically modified crops in the EU amounts to only a few thousand hectares and accounts for only some 0.03% of the world production. A significant gap exists between the more than fifty genetically modified crop species already permitted to be cultivated and to be placed on the market in the USA, Canada and other countries and the five genetically modified crop species permitted for the same use in the EU member states, which are still pending inclusion in the Common Catalogue of agricultural plant species. The further development of the "green gene technology" in the EU will be a matter of public acceptance and administrative legislation.

Transgenic, transplastomic and other genetically modified plants: a Canadian perspective.

PubMed

Belzile, François J

2002-11-01

Since the mid 1990s, genetically modified (GM) crops have been grown commercially in Canada on a scale that has increased steadily over the years. An intense debate ensued, as elsewhere, and many fears were expressed regarding not only the technology itself but some of the main GM crops being grown. It would seem appropriate at this time to examine how these novel crops compare to crops bred by more traditional means and what impacts these GM crops have had based on experience and not merely on conjecture. To begin, we will put things in a historical perspective and recall how domestication and conventional plant breeding have shaped the crops of today. Then, we will describe briefly the distinctive features of GM plants (obtained so far mainly by nuclear transgenesis) and how these novel crops are regulated in Canada. We will then give two examples of widely grown GM crops in Canada (insect-resistant corn and herbicide-tolerant canola) and examine the main questions that were raised as well as the actual impacts these crops have had on the farm. These examples will help us outline some of the limitations of the current generation of GM plants and, finally, we will try to get a glimpse of the future by examining some recent technical developments in the field of recombinant DNA technologies applied to plant breeding.

Recombinase Polymerase Amplification (RPA) of CaMV-35S Promoter and nos Terminator for Rapid Detection of Genetically Modified Crops

PubMed Central

Xu, Chao; Li, Liang; Jin, Wujun; Wan, Yusong

2014-01-01

Recombinase polymerase amplification (RPA) is a novel isothermal DNA amplification and detection technology that enables the amplification of DNA within 30 min at a constant temperature of 37–42 °C by simulating in vivo DNA recombination. In this study, based on the regulatory sequence of the cauliflower mosaic virus 35S (CaMV-35S) promoter and the Agrobacterium tumefaciens nopaline synthase gene (nos) terminator, which are widely incorporated in genetically modified (GM) crops, we designed two sets of RPA primers and established a real-time RPA detection method for GM crop screening and detection. This method could reliably detect as few as 100 copies of the target molecule in a sample within 15–25 min. Furthermore, the real-time RPA detection method was successfully used to amplify and detect DNA from samples of four major GM crops (maize, rice, cotton, and soybean). With this novel amplification method, the test time was significantly shortened and the reaction process was simplified; thus, this method represents an effective approach to the rapid detection of GM crops. PMID:25310647

Recombinase polymerase amplification (RPA) of CaMV-35S promoter and nos terminator for rapid detection of genetically modified crops.

PubMed

Xu, Chao; Li, Liang; Jin, Wujun; Wan, Yusong

2014-10-10

Recombinase polymerase amplification (RPA) is a novel isothermal DNA amplification and detection technology that enables the amplification of DNA within 30 min at a constant temperature of 37-42 °C by simulating in vivo DNA recombination. In this study, based on the regulatory sequence of the cauliflower mosaic virus 35S (CaMV-35S) promoter and the Agrobacterium tumefaciens nopaline synthase gene (nos) terminator, which are widely incorporated in genetically modified (GM) crops, we designed two sets of RPA primers and established a real-time RPA detection method for GM crop screening and detection. This method could reliably detect as few as 100 copies of the target molecule in a sample within 15-25 min. Furthermore, the real-time RPA detection method was successfully used to amplify and detect DNA from samples of four major GM crops (maize, rice, cotton, and soybean). With this novel amplification method, the test time was significantly shortened and the reaction process was simplified; thus, this method represents an effective approach to the rapid detection of GM crops.

Detection and identification of genetically modified EE-1 brinjal (Solanum melongena) by single, multiplex and SYBR® real-time PCR.

PubMed

Ballari, Rajashekhar V; Martin, Asha; Gowda, Lalitha R

2013-01-01

Brinjal is an important vegetable crop. Major crop loss of brinjal is due to insect attack. Insect-resistant EE-1 brinjal has been developed and is awaiting approval for commercial release. Consumer health concerns and implementation of international labelling legislation demand reliable analytical detection methods for genetically modified (GM) varieties. End-point and real-time polymerase chain reaction (PCR) methods were used to detect EE-1 brinjal. In end-point PCR, primer pairs specific to 35S CaMV promoter, NOS terminator and nptII gene common to other GM crops were used. Based on the revealed 3' transgene integration sequence, primers specific for the event EE-1 brinjal were designed. These primers were used for end-point single, multiplex and SYBR-based real-time PCR. End-point single PCR showed that the designed primers were highly specific to event EE-1 with a sensitivity of 20 pg of genomic DNA, corresponding to 20 copies of haploid EE-1 brinjal genomic DNA. The limits of detection and quantification for SYBR-based real-time PCR assay were 10 and 100 copies respectively. The prior development of detection methods for this important vegetable crop will facilitate compliance with any forthcoming labelling regulations. Copyright © 2012 Society of Chemical Industry.

Genetically modified foods and allergy.

PubMed

Lee, T H; Ho, H K; Leung, T F

2017-06-01

2015 marked the 25th anniversary of the commercial use and availability of genetically modified crops. The area of planted biotech crops cultivated globally occupies a cumulative two billion hectares, equivalent to twice the land size of China or the United States. Foods derived from genetically modified plants are widely consumed in many countries and genetically modified soybean protein is extensively used in processed foods throughout the industrialised countries. Genetically modified food technology offers a possible solution to meet current and future challenges in food and medicine. Yet there is a strong undercurrent of anxiety that genetically modified foods are unsafe for human consumption, sometimes fuelled by criticisms based on little or no firm evidence. This has resulted in some countries turning away food destined for famine relief because of the perceived health risks of genetically modified foods. The major concerns include their possible allergenicity and toxicity despite the vigorous testing of genetically modified foods prior to marketing approval. It is imperative that scientists engage the public in a constructive evidence-based dialogue to address these concerns. At the same time, improved validated ways to test the safety of new foods should be developed. A post-launch strategy should be established routinely to allay concerns. Mandatory labelling of genetically modified ingredients should be adopted for the sake of transparency. Such ingredient listing and information facilitate tracing and recall if required.

Statistical framework for detection of genetically modified organisms based on Next Generation Sequencing.

PubMed

Willems, Sander; Fraiture, Marie-Alice; Deforce, Dieter; De Keersmaecker, Sigrid C J; De Loose, Marc; Ruttink, Tom; Herman, Philippe; Van Nieuwerburgh, Filip; Roosens, Nancy

2016-02-01

Because the number and diversity of genetically modified (GM) crops has significantly increased, their analysis based on real-time PCR (qPCR) methods is becoming increasingly complex and laborious. While several pioneers already investigated Next Generation Sequencing (NGS) as an alternative to qPCR, its practical use has not been assessed for routine analysis. In this study a statistical framework was developed to predict the number of NGS reads needed to detect transgene sequences, to prove their integration into the host genome and to identify the specific transgene event in a sample with known composition. This framework was validated by applying it to experimental data from food matrices composed of pure GM rice, processed GM rice (noodles) or a 10% GM/non-GM rice mixture, revealing some influential factors. Finally, feasibility of NGS for routine analysis of GM crops was investigated by applying the framework to samples commonly encountered in routine analysis of GM crops. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

Use of Satellite-based Remote Sensing to inform Evapotranspiration parameters in Cropping System Models

NASA Astrophysics Data System (ADS)

Dhungel, S.; Barber, M. E.

2016-12-01

The objectives of this paper are to use an automated satellite-based remote sensing evapotranspiration (ET) model to assist in parameterization of a cropping system model (CropSyst) and to examine the variability of consumptive water use of various crops across the watershed. The remote sensing model is a modified version of the Mapping Evapotranspiration at high Resolution with Internalized Calibration (METRIC™) energy balance model. We present the application of an automated python-based implementation of METRIC to estimate ET as consumptive water use for agricultural areas in three watersheds in Eastern Washington - Walla Walla, Lower Yakima and Okanogan. We used these ET maps with USDA crop data to identify the variability of crop growth and water use for the major crops in these three watersheds. Some crops, such as grapes and alfalfa, showed high variability in water use in the watershed while others, such as corn, had comparatively less variability. The results helped us to estimate the range and variability of various crop parameters that are used in CropSyst. The paper also presents a systematic approach to estimate parameters of CropSyst for a crop in a watershed using METRIC results. Our initial application of this approach was used to estimate irrigation application rate for CropSyst for a selected farm in Walla Walla and was validated by comparing crop growth (as Leaf Area Index - LAI) and consumptive water use (ET) from METRIC and CropSyst. This coupling of METRIC with CropSyst will allow for more robust parameters in CropSyst and will enable accurate predictions of changes in irrigation practices and crop rotation, which are a challenge in many cropping system models.

Policy-Led Comparative Environmental Risk Assessment of Genetically Modified Crops: Testing for Increased Risk Rather Than Profiling Phenotypes Leads to Predictable and Transparent Decision-Making

PubMed Central

Raybould, Alan; Macdonald, Phil

2018-01-01

We describe two contrasting methods of comparative environmental risk assessment for genetically modified (GM) crops. Both are science-based, in the sense that they use science to help make decisions, but they differ in the relationship between science and policy. Policy-led comparative risk assessment begins by defining what would be regarded as unacceptable changes when the use a particular GM crop replaces an accepted use of another crop. Hypotheses that these changes will not occur are tested using existing or new data, and corroboration or falsification of the hypotheses is used to inform decision-making. Science-led comparative risk assessment, on the other hand, tends to test null hypotheses of no difference between a GM crop and a comparator. The variables that are compared may have little or no relevance to any previously stated policy objective and hence decision-making tends to be ad hoc in response to possibly spurious statistical significance. We argue that policy-led comparative risk assessment is the far more effective method. With this in mind, we caution that phenotypic profiling of GM crops, particularly with omics methods, is potentially detrimental to risk assessment. PMID:29755975

HYBRIDIZATION STUDY BETWEEN GENETICALLY MODIFIED BRASSICA NAPUS AND NON-GENETICALLY MODIFIED B. NAPUS AND B. RAPA

EPA Science Inventory

Gene exchange between cultivated crops and wild species has gained significance in recent years because of concerns regarding the potential for gene flow between genetically modified (GM) crops and their domesticated and wild relatives. As part of our ecological effects of gene ...

MATERNAL EFFECTS IN ADVANCED HYBRIDS OF GENETICALLY MODIFIED AND NON-GENETICALLY MODIFIED BRASSICA SPECIES

EPA Science Inventory

Identification of fitness traits potentially impacted by gene flow from genetically modified (GM) crops to compatible relatives is of interest in risk assessments for GM crops. Reciprocal crosses were made between GM canola, Brassica napus cv. RaideRR that expresses CP4 EPSPS fo...

Advancing environmental risk assessment for transgenic biofeedstock crops

PubMed Central

Wolt, Jeffrey D

2009-01-01

Transgenic modification of plants is a key enabling technology for developing sustainable biofeedstocks for biofuels production. Regulatory decisions and the wider acceptance and development of transgenic biofeedstock crops are considered from the context of science-based risk assessment. The risk assessment paradigm for transgenic biofeedstock crops is fundamentally no different from that of current generation transgenic crops, except that the focus of the assessment must consider the unique attributes of a given biofeedstock crop and its environmental release. For currently envisioned biofeedstock crops, particular emphasis in risk assessment will be given to characterization of altered metabolic profiles and their implications relative to non-target environmental effects and food safety; weediness and invasiveness when plants are modified for abiotic stress tolerance or are domesticated; and aggregate risk when plants are platforms for multi-product production. Robust risk assessments for transgenic biofeedstock crops are case-specific, initiated through problem formulation, and use tiered approaches for risk characterization. PMID:19883509

Safety of Pseudomonas chlororaphis as a gene source for genetically modified crops.

PubMed

Anderson, Jennifer A; Staley, Jamie; Challender, Mary; Heuton, Jamie

2018-02-01

Genetically modified crops undergo extensive evaluation to characterize their food, feed and environmental safety prior to commercial introduction, using a well-established, science-based assessment framework. One component of the safety assessment includes an evaluation of each introduced trait, including its source organism, for potential adverse pathogenic, toxic and allergenic effects. Several Pseudomonas species have a history of safe use in agriculture and certain species represent a source of genes with insecticidal properties. The ipd072Aa gene from P. chlororaphis encodes the IPD072Aa protein, which confers protection against certain coleopteran pests when expressed in maize plants. P. chlororaphis is ubiquitous in the environment, lacks known toxic or allergenic properties, and has a history of safe use in agriculture and in food and feed crops. This information supports, in part, the safety assessment of potential traits, such as IPD072Aa, that are derived from this source organism.

Environmental release of living modified organisms: current approaches and case studies.

PubMed

Thomas, E; Nickson, Ph D

2005-01-01

Agricultural biotechnology is being rapidly adopted as evidenced by the acreage of genetically modified (GM) crops planted and tonnes of product (grain and fiber) harvested. Concurrent with this technological progress, is a growing concern that the worlds biological diversity is coming under increasing threat from human activities. As such, ecological risk assessment approaches are being developed for GM crop plants as international agreements regulating the transboundary movements of these products are being implemented. This paper reviews the ecological risk assessment approach that has been used to date to approve GM crops to date. The process has been case-by-case, using a comparative, science-based approach balancing the potential risks and benefits of the new technology versus those present with the currently accepted practices. The approach used to evaluate and approve these products is consistent with the conditions and requirements outlined in the Cartagena Protocol.

Spatiotemporal patterns of non-genetically modified crops in the era of expansion of genetically modified food

PubMed Central

Sun, Jing; Wu, Wenbin; Tang, Huajun; Liu, Jianguo

2015-01-01

Despite heated debates over the safety of genetically modified (GM) food, GM crops have been expanding rapidly. Much research has focused on the expansion of GM crops. However, the spatiotemporal dynamics of non-genetically modified (non-GM) crops are not clear, although they may have significant environmental and agronomic impacts and important policy implications. To understand the dynamics of non-GM crops and to inform the debates among relevant stakeholders, we conducted spatiotemporal analyses of China’s major non-GM soybean production region, the Heilongjiang Province. Even though the total soybean planting area decreased from 2005 to 2010, surprisingly, there were hotspots of increase. The results also showed hotspots of loss as well as a large decline in the number and continuity of soybean plots. Since China is the largest non-GM soybean producer in the world, the decline of its major production region may signal the continual decline of global non-GM soybeans. PMID:26380899

Spatiotemporal patterns of non-genetically modified crops in the era of expansion of genetically modified food.

PubMed

Sun, Jing; Wu, Wenbin; Tang, Huajun; Liu, Jianguo

2015-09-18

Despite heated debates over the safety of genetically modified (GM) food, GM crops have been expanding rapidly. Much research has focused on the expansion of GM crops. However, the spatiotemporal dynamics of non-genetically modified (non-GM) crops are not clear, although they may have significant environmental and agronomic impacts and important policy implications. To understand the dynamics of non-GM crops and to inform the debates among relevant stakeholders, we conducted spatiotemporal analyses of China's major non-GM soybean production region, the Heilongjiang Province. Even though the total soybean planting area decreased from 2005 to 2010, surprisingly, there were hotspots of increase. The results also showed hotspots of loss as well as a large decline in the number and continuity of soybean plots. Since China is the largest non-GM soybean producer in the world, the decline of its major production region may signal the continual decline of global non-GM soybeans.

METHODS FOR DETERMINING EXPOSURE TO AND POTENTIAL ECOLOGICAL EFFECTS OF GENE FLOW FROM GENETICALLY MODIFIED CROPS TO COMPATIBLE RELATIVES

EPA Science Inventory

SCIENCE QUESTIONS:

-Does gene flow occur from genetically modified (GM) crop plants to compatible plants?

-How can it be measured?

-Are there ecological consequences of GM crop gene flow to plant communities?



RESEARCH:

The objectives ...

The evolution of modern agriculture and its future with biotechnology.

PubMed

Harlander, Susan K

2002-06-01

Since the dawn of agriculture, humans have been manipulating crops to enhance their quality and yield. Via conventional breeding, seed producers have developed the modern corn hybrids and wheat commonly grown today. Newer techniques, such as radiation breeding, enhanced the seed producers' ability to develop new traits in crops. Then in the 1980's-1990's, scientists began applying genetic engineering techniques to improve crop quality and yield. In contrast to earlier breeding methods, these techniques raised questions about their safety to consumers and the environment. This paper provides an overview of the kinds of genetically modified crops developed and marketed to date and the value they provide farmers and consumers. The safety assessment process required for these crops is contrasted with the lack of a formal process required for traditionally bred crops. While European consumers have expressed concern about foods and animal feeds containing ingredients from genetically modified crops, Americans have largely been unconcerned or unaware of the presence of genetically modified foods on the market. This difference in attitude is reflected in Europe's decision to label foods containing genetically modified ingredients while no such labeling is required in the U.S. In the future, genetic modification will produce a variety of new products with enhanced nutritional or quality attributes.

Camelina sativa: An ideal platform for the metabolic engineering and field production of industrial lipids.

PubMed

Bansal, Sunil; Durrett, Timothy P

2016-01-01

Triacylglycerols (TAG) containing modified fatty acids with functionality beyond those found in commercially grown oil seed crops can be used as feedstocks for biofuels and bio-based materials. Over the years, advances have been made in transgenically engineering the production of various modified fatty acids in the model plant Arabidopsis thaliana. However, the inability to produce large quantities of transgenic seed has limited the functional testing of the modified oil. In contrast, the emerging oil seed crop Camelina sativa possesses important agronomic traits that recommend it as an ideal production platform for biofuels and industrial feedstocks. Camelina possesses low water and fertilizer requirements and is capable of yields comparable to other oil seed crops, particularly under stress conditions. Importantly, its relatively short growing season enables it to be grown as part of a double cropping system. In addition to these valuable agronomic features, Camelina is amenable to rapid metabolic engineering. The development of a simple and effective transformation method, combined with the availability of abundant transcriptomic and genomic data, has allowed the generation of transgenic Camelina lines capable of synthesizing high levels of unusual lipids. In some cases these levels have surpassed what was achieved in Arabidopsis. Further, the ability to use Camelina as a crop production system has allowed for the large scale growth of transgenic oil seed crops, enabling subsequent physical property testing. The application of new techniques such as genome editing will further increase the suitability of Camelina as an ideal platform for the production of biofuels and bio-materials. Copyright © 2015 Elsevier B.V. and Société Française de Biochimie et Biologie Moléculaire (SFBBM). All rights reserved.

The release of genetically modified crops into the environment. Part II. Overview of ecological risk assessment.

PubMed

Conner, Anthony J; Glare, Travis R; Nap, Jan-Peter

2003-01-01

Despite numerous future promises, there is a multitude of concerns about the impact of GM crops on the environment. Key issues in the environmental assessment of GM crops are putative invasiveness, vertical or horizontal gene flow, other ecological impacts, effects on biodiversity and the impact of presence of GM material in other products. These are all highly interdisciplinary and complex issues. A crucial component for a proper assessment is defining the appropriate baseline for comparison and decision. For GM crops, the best and most appropriately defined reference point is the impact of plants developed by traditional breeding. The latter is an integral and accepted part of agriculture. In many instances, the putative impacts identified for GM crops are very similar to the impacts of new cultivars derived from traditional breeding. When assessing GM crops relative to existing cultivars, the increased knowledge base underpinning the development of GM crops will provide greater confidence in the assurances plant science can give on the risks of releasing such crops.

Is genetically modified crop the answer for the next green revolution?

PubMed

Basu, Saikat Kumar; Dutta, Madhuleema; Goyal, Aakash; Bhowmik, Pankaj Kumar; Kumar, Jitendra; Nandy, Sanjib; Scagliusi, Sandra Mansun; Prasad, Rajib

2010-01-01

Post-green revolution advances made in biotechnology paved the way of cultivating the high-yielding, stress and disease resistant genetically modified (GM) varieties of wheat, rice, maize cotton and several other crops. The recent rapid commercialization of the genetically modified crops in Asia, Americas and Australia indicates the potentiality of this new technology. GM crops give higher yields and are rich in nutritional values containing vitamins and minerals and can thus can help to alleviate hunger and malnutrition of the growing population in the under developed and developing countries. It could also be possible to develop more biotic and abiotic stress resistant genotypes in these crops where it was difficult to develop due to the unavailability of genes of resistance in the crossing germplasms. However, further research and investigations are needed to popularize the cultivation of these crops in different parts of the world. This review provides an insight of the impact of GM crops on contemporary agriculture across the past few decades, traces its' history across time, highlights new achievements and breakthroughs and discusses the future implication of this powerful technology in the coming few decades.

Changes in the Relative Abundance and Movement of Insect Pollinators During the Flowering Cycle of Brassica rapa Crops: Implications for Gene Flow

PubMed Central

Mesa, Laura A.; Howlett, Bradley G.; Grant, Jan E.; Didham, Raphael K.

2013-01-01

The potential movement of transgenes from genetically modified crops to non-genetically modified crops via insect-mediated pollen dispersal has been highlighted as one of the areas of greatest concern in regards to genetically modified crops. Pollen movement depends sensitively on spatial and temporal variation in the movement of insect pollinators between crop fields. This study tested the degree of variation in the diversity and relative abundance of flower-visiting insects entering versus leaving pak choi, Brassica rapa var. chinensis L. (Brassicales: Brassicaceae), crops throughout different stages of the flowering cycle. The relative abundance of flower-visiting insects varied significantly with Brassica crop phenology. Greater numbers of flower-visiting insects were captured inside rather than outside the crop fields, with the highest capture rates of flower-visitors coinciding with the peak of flowering in both spring-flowering and summer-flowering crops. Moreover, the ratio of flower-visiting insects entering versus leaving crop fields also varied considerably with changing crop phenology. Despite high variation in relative capture rates, the data strongly indicate non-random patterns of variation in insect movement in relation to crop phenology, with early-season aggregation of flower-visiting insects entering and remaining in the crop, and then mass emigration of flower-visiting insects leaving the crop late in the flowering season. Although pollen movement late in the flowering cycle might contribute relatively little to total seed set (and hence crop production), the findings here suggest that extensive late-season pollinator redistribution in the landscape could contribute disproportionately to long-distance gene movement between crops. PMID:23937538

[Genetically modified organisms in food--production, detection and risks].

PubMed

Zeljezić, Davor

2004-11-01

The first genetically modified plant (GMP) was a tobacco resistant to antibiotics in 1983. In 1996, the first genetically altered crop, a delayed-ripening tomato was commercially released. In the year 2003, the estimated global area of GM crops for was 67.7 million hectares. To produce such a plant a gene of interest has to be isolated from the donor. Together with a promoter, terminator sequence and marker gene it has to be introduced into the plant cell which is then stimulated to generate a whole GMP expressing new characteristics (herbicide/insect resistance, delayed ripening). The last few months have seen a strong public debate over genetically modified organisms which has raised scientific, economic, political, and ethical issues. Some questions concerning the safety of GMPs are still to be answered, and decisions about their future should be based on scientifically validated information.

[The EU law on genetically modified organisms: the European Commission changes the strategy in order to allow, restrict, or prohibit its culture].

PubMed

González Vaqué, Luis

2010-01-01

On July 13 2010, the European Commission adopted a series of measures which outline a new approach on Genetically Modified Organisms (GMOs) cultivation in the Member States. This proposal, which still retains the basis of the existing science-based GMO authorisation system, will be implemented through: a Communication from the Commission, explaining the new approach on the freedom for Member States to decide on the cultivation of genetically modified crops; the "Proposal for a Regulation of the European Parliament and of the Council amending Directive 2001/18/EC as regards the possibility for the Member States to restrict or prohibit the cultivation of GMOs in their territory"; and a new "European Commission Recommendation (2010/C 200/01) of 13 July 2010 on guidelines for the development of national co-existence measures to avoid the unintended presence of GMOs in conventional and organic crops".

Genetically modified (GM) crops: milestones and new advances in crop improvement.

PubMed

Kamthan, Ayushi; Chaudhuri, Abira; Kamthan, Mohan; Datta, Asis

2016-09-01

New advances in crop genetic engineering can significantly pace up the development of genetically improved varieties with enhanced yield, nutrition and tolerance to biotic and abiotic stresses. Genetically modified (GM) crops can act as powerful complement to the crops produced by laborious and time consuming conventional breeding methods to meet the worldwide demand for quality foods. GM crops can help fight malnutrition due to enhanced yield, nutritional quality and increased resistance to various biotic and abiotic stresses. However, several biosafety issues and public concerns are associated with cultivation of GM crops developed by transgenesis, i.e., introduction of genes from distantly related organism. To meet these concerns, researchers have developed alternative concepts of cisgenesis and intragenesis which involve transformation of plants with genetic material derived from the species itself or from closely related species capable of sexual hybridization, respectively. Recombinase technology aimed at site-specific integration of transgene can help to overcome limitations of traditional genetic engineering methods based on random integration of multiple copy of transgene into plant genome leading to gene silencing and unpredictable expression pattern. Besides, recently developed technology of genome editing using engineered nucleases, permit the modification or mutation of genes of interest without involving foreign DNA, and as a result, plants developed with this technology might be considered as non-transgenic genetically altered plants. This would open the doors for the development and commercialization of transgenic plants with superior phenotypes even in countries where GM crops are poorly accepted. This review is an attempt to summarize various past achievements of GM technology in crop improvement, recent progress and new advances in the field to develop improved varieties aimed for better consumer acceptance.

Screening DNA chip and event-specific multiplex PCR detection methods for biotech crops.

PubMed

Lee, Seong-Hun

2014-11-01

There are about 80 biotech crop events that have been approved by safety assessment in Korea. They have been controlled by genetically modified organism (GMO) and living modified organism (LMO) labeling systems. The DNA-based detection method has been used as an efficient scientific management tool. Recently, the multiplex polymerase chain reaction (PCR) and DNA chip have been developed as simultaneous detection methods for several biotech crops' events. The event-specific multiplex PCR method was developed to detect five biotech maize events: MIR604, Event 3272, LY 038, MON 88017 and DAS-59122-7. The specificity was confirmed and the sensitivity was 0.5%. The screening DNA chip was developed from four endogenous genes of soybean, maize, cotton and canola respectively along with two regulatory elements and seven genes: P35S, tNOS, pat, bar, epsps1, epsps2, pmi, cry1Ac and cry3B. The specificity was confirmed and the sensitivity was 0.5% for four crops' 12 events: one soybean, six maize, three cotton and two canola events. The multiplex PCR and DNA chip can be available for screening, gene-specific and event-specific analysis of biotech crops as efficient detection methods by saving on workload and time. © 2014 Society of Chemical Industry. © 2014 Society of Chemical Industry.

The use of whole food animal studies in the safety assessment of genetically modified crops: limitations and recommendations.

PubMed

Bartholomaeus, Andrew; Parrott, Wayne; Bondy, Genevieve; Walker, Kate

2013-11-01

There is disagreement internationally across major regulatory jurisdictions on the relevance and utility of whole food (WF) toxicity studies on GM crops, with no harmonization of data or regulatory requirements. The scientific value, and therefore animal ethics, of WF studies on GM crops is a matter addressable from the wealth of data available on commercialized GM crops and WF studies on irradiated foods. We reviewed available GM crop WF studies and considered the extent to which they add to the information from agronomic and compositional analyses. No WF toxicity study was identified that convincingly demonstrated toxicological concern or that called into question the adequacy, sufficiency, and reliability of safety assessments based on crop molecular characterization, transgene source, agronomic characteristics, and/or compositional analysis of the GM crop and its near-isogenic line. Predictions of safety based on crop genetics and compositional analyses have provided complete concordance with the results of well-conducted animal testing. However, this concordance is primarily due to the improbability of de novo generation of toxic substances in crop plants using genetic engineering practices and due to the weakness of WF toxicity studies in general. Thus, based on the comparative robustness and reliability of compositional and agronomic considerations and on the absence of any scientific basis for a significant potential for de novo generation of toxicologically significant compositional alterations as a sole result of transgene insertion, the conclusion of this review is that WF animal toxicity studies are unnecessary and scientifically unjustifiable.

Risk, regulation and biotechnology: the case of GM crops.

PubMed

Smyth, Stuart J; Phillips, Peter W B

2014-07-03

The global regulation of products of biotechnology is increasingly divided. Regulatory decisions for genetically modified (GM) crops in North America are predictable and efficient, with numerous countries in Latin and South America, Australia and Asia following this lead. While it might have been possible to argue that Europe's regulations were at one time based on real concerns about minimizing risks and ensuring health and safety, it is increasingly apparent that the entire European Union (EU) regulatory system for GM crops and foods is now driven by political agendas. Countries within the EU are at odds with each other as some have commercial production of GM crops, while others refuse to even develop regulations that could provide for the commercial release of GM crops. This divide in regulatory decision-making is affecting international grain trade, creating challenges for feeding an increasing global population.

A high-throughput method for GMO multi-detection using a microfluidic dynamic array.

PubMed

Brod, Fábio Cristiano Angonesi; van Dijk, Jeroen P; Voorhuijzen, Marleen M; Dinon, Andréia Zilio; Guimarães, Luis Henrique S; Scholtens, Ingrid M J; Arisi, Ana Carolina Maisonnave; Kok, Esther J

2014-02-01

The ever-increasing production of genetically modified crops generates a demand for high-throughput DNA-based methods for the enforcement of genetically modified organisms (GMO) labelling requirements. The application of standard real-time PCR will become increasingly costly with the growth of the number of GMOs that is potentially present in an individual sample. The present work presents the results of an innovative approach in genetically modified crops analysis by DNA based methods, which is the use of a microfluidic dynamic array as a high throughput multi-detection system. In order to evaluate the system, six test samples with an increasing degree of complexity were prepared, preamplified and subsequently analysed in the Fluidigm system. Twenty-eight assays targeting different DNA elements, GM events and species-specific reference genes were used in the experiment. The large majority of the assays tested presented expected results. The power of low level detection was assessed and elements present at concentrations as low as 0.06 % were successfully detected. The approach proposed in this work presents the Fluidigm system as a suitable and promising platform for GMO multi-detection.

Variables Affecting Secondary School Students' Willingness to Eat Genetically Modified Food Crops

NASA Astrophysics Data System (ADS)

Maes, Jasmien; Bourgonjon, Jeroen; Gheysen, Godelieve; Valcke, Martin

2017-04-01

A large-scale cross-sectional study (N = 4002) was set up to determine Flemish secondary school students' willingness to eat genetically modified food (WTE) and to link students' WTE to previously identified key variables from research on the acceptance of genetic modification (GM). These variables include subjective and objective knowledge about genetics and biotechnology, perceived risks and benefits of GM food crops, trust in information from different sources about GM, and food neophobia. Differences between WTE-related variables based on students' grade level, educational track, and gender were analyzed. The students displayed a rather indecisive position toward GM food and scored weakly on a genetics and biotechnology knowledge test. WTE correlated most strongly with perceived benefits and subjective and objective knowledge. The results have clear implications for education, as they reiterate the need to strengthen students' scientific knowledge base and to introduce a GM-related debate at a much earlier stage in their school career.

Variables Affecting Secondary School Students' Willingness to Eat Genetically Modified Food Crops

NASA Astrophysics Data System (ADS)

Maes, Jasmien; Bourgonjon, Jeroen; Gheysen, Godelieve; Valcke, Martin

2018-06-01

A large-scale cross-sectional study ( N = 4002) was set up to determine Flemish secondary school students' willingness to eat genetically modified food (WTE) and to link students' WTE to previously identified key variables from research on the acceptance of genetic modification (GM). These variables include subjective and objective knowledge about genetics and biotechnology, perceived risks and benefits of GM food crops, trust in information from different sources about GM, and food neophobia. Differences between WTE-related variables based on students' grade level, educational track, and gender were analyzed. The students displayed a rather indecisive position toward GM food and scored weakly on a genetics and biotechnology knowledge test. WTE correlated most strongly with perceived benefits and subjective and objective knowledge. The results have clear implications for education, as they reiterate the need to strengthen students' scientific knowledge base and to introduce a GM-related debate at a much earlier stage in their school career.

A second-generation expression system for tyrosine-sulfated proteins and its application in crop protection.

PubMed

Schwessinger, Benjamin; Li, Xiang; Ellinghaus, Thomas L; Chan, Leanne Jade G; Wei, Tong; Joe, Anna; Thomas, Nicholas; Pruitt, Rory; Adams, Paul D; Chern, Maw Sheng; Petzold, Christopher J; Liu, Chang C; Ronald, Pamela C

2016-04-18

Posttranslational modification (PTM) of proteins and peptides is important for diverse biological processes in plants and animals. The paucity of heterologous expression systems for PTMs and the technical challenges associated with chemical synthesis of these modified proteins has limited detailed molecular characterization and therapeutic applications. Here we describe an optimized system for expression of tyrosine-sulfated proteins in Escherichia coli and its application in a bio-based crop protection strategy in rice.

A second-generation expression system for tyrosine-sulfated proteins and its application in crop protection

DOE PAGES

Schwessinger, Benjamin; Li, Xiang; Ellinghaus, Thomas L.; ...

2015-11-27

Posttranslational modification (PTM) of proteins and peptides is important for diverse biological processes in plants and animals. The paucity of heterologous expression systems for PTMs and the technical challenges associated with chemical synthesis of these modified proteins has limited detailed molecular characterization and therapeutic applications. Here we describe an optimized system for expression of tyrosine-sulfated proteins in Escherichia coli and its application in a bio-based crop protection strategy in rice.

Analytical criteria for performance characteristics of IgE binding methods for evaluating safety of biotech food products.

PubMed

Holzhauser, Thomas; Ree, Ronald van; Poulsen, Lars K; Bannon, Gary A

2008-10-01

There is detailed guidance on how to perform bioinformatic analyses and enzymatic degradation studies for genetically modified crops under consideration for approval by regulatory agencies; however, there is no consensus in the scientific community on the details of how to perform IgE serum studies. IgE serum studies are an important safety component to acceptance of genetically modified crops when the introduced protein is novel, the introduced protein is similar to known allergens, or the crop is allergenic. In this manuscript, we describe the characteristics of the reagents, validation of assay performance, and data analysis necessary to optimize the information obtained from serum testing of novel proteins and genetically modified (GM) crops and to make results more accurate and comparable between different investigations.

Linking a modified EPIC-based growth model (UPGM) with a component-based watershed model (AGES-W)

USDA-ARS?s Scientific Manuscript database

Agricultural models and decision support systems (DSS) for assessing water use and management are increasingly being applied to diverse geographic regions at different scales. This requires models that can simulate different crops, however, very few plant growth models are available that “easily” ...

Bee genera, diversity and abundance in genetically modified canola fields.

PubMed

O'Brien, Colton; Arathi, H S

2018-01-02

Intensive agricultural practices resulting in large scale habitat loss ranks as the top contributing factors in the global bee decline. Growing Genetically Modified Herbicide Tolerant (GMHT) crops as large monocultures has resulted extensive applications of herbicides leading to the degradation of natural habitats surrounding farmlands. Herbicide tolerance trait is beneficial for crops such as Canola (Brassica napus) that are extremely vulnerable to weed competition. While the trait in itself does not harm pollinators, growing genetically modified herbicide tolerant cultivars indirectly contributes towards pollinator declines through habitat loss. Canola, a mass-flowering crop is highly attractive to bee pollinators and the extensive adoption of the herbicide tolerant trait has led to depletion of non-crop floral resources. Extensive use of herbicide in and near fields with herbicide tolerant cultivars systematically eliminates semi-natural habitats around agricultural fields which consist of non-crop flowering plants. Planting pollinator strips provides floral resources for bees after crop flowering. We document the bee genera in canola and the adjoining pollinator strip. The overlap in bee genera reinforces the importance of pollinator habitats in agricultural landscape.

Real-time PCR array as a universal platform for the detection of genetically modified crops and its application in identifying unapproved genetically modified crops in Japan.

PubMed

Mano, Junichi; Shigemitsu, Natsuki; Futo, Satoshi; Akiyama, Hiroshi; Teshima, Reiko; Hino, Akihiro; Furui, Satoshi; Kitta, Kazumi

2009-01-14

We developed a novel type of real-time polymerase chain reaction (PCR) array with TaqMan chemistry as a platform for the comprehensive and semiquantitative detection of genetically modified (GM) crops. Thirty primer-probe sets for the specific detection of GM lines, recombinant DNA (r-DNA) segments, endogenous reference genes, and donor organisms were synthesized, and a 96-well PCR plate was prepared with a different primer-probe in each well as the real-time PCR array. The specificity and sensitivity of the array were evaluated. A comparative analysis with the data and publicly available information on GM crops approved in Japan allowed us to assume the possibility of unapproved GM crop contamination. Furthermore, we designed a Microsoft Excel spreadsheet application, Unapproved GMO Checker version 2.01, which helps process all the data of real-time PCR arrays for the easy assumption of unapproved GM crop contamination. The spreadsheet is available free of charge at http://cse.naro.affrc.go.jp/jmano/index.html .

Retrospective Analog Year Analyses Using NASA Satellite Data to Improve USDA's World Agricultural Supply and Demand Estimates

NASA Technical Reports Server (NTRS)

Teng, William; Shannon, Harlan

2011-01-01

The USDA World Agricultural Outlook Board (WAOB) is responsible for monitoring weather and climate impacts on domestic and foreign crop development. One of WAOB's primary goals is to determine the net cumulative effect of weather and climate anomalies on final crop yields. To this end, a broad array of information is consulted, including maps, charts, and time series of recent weather, climate, and crop observations; numerical output from weather and crop models; and reports from the press, USDA attach s, and foreign governments. The resulting agricultural weather assessments are published in the Weekly Weather and Crop Bulletin, to keep farmers, policy makers, and commercial agricultural interests informed of weather and climate impacts on agriculture. Because both the amount and timing of precipitation significantly affect crop yields, WAOB often uses precipitation time series to identify growing seasons with similar weather patterns and help estimate crop yields for the current growing season, based on observed yields in analog years. Historically, these analog years are visually identified; however, the qualitative nature of this method sometimes precludes the definitive identification of the best analog year. Thus, one goal of this study is to derive a more rigorous, statistical approach for identifying analog years, based on a modified coefficient of determination, termed the analog index (AI). A second goal is to compare the performance of AI for time series derived from surface-based observations vs. satellite-based measurements (NASA TRMM and other data).

Environmental biosafety and transgenic potato in a centre of diversity for this crop.

PubMed

Celis, Carolina; Scurrah, Maria; Cowgill, Sue; Chumbiauca, Susana; Green, Jayne; Franco, Javier; Main, Gladys; Kiezebrink, Daan; Visser, Richard G F; Atkinson, Howard J

2004-11-11

The Nuffield Council on Bioethics suggests that introgression of genetic material into related species in centres of crop biodiversity is an insufficient justification to bar the use of genetically modified crops in the developing world. They consider that a precautionary approach to forgo the possible benefits invokes the fallacy of thinking that doing nothing is itself without risk to the poor. Here we report findings relevant to this and other aspects of environmental biosafety for genetically modified potato in its main centre of biodiversity, the central Andes. We studied genetically modified potato clones that provide resistance to nematodes, principal pests of Andean potato crops. We show that there is no harm to many non-target organisms, but gene flow occurs to wild relatives growing near potato crops. If stable introgression were to result, the fitness of these wild species could be altered. We therefore transformed the male sterile cultivar Revolucion to provide a genetically modified nematode-resistant potato to evaluate the benefits that this provides until the possibility of stable introgression to wild relatives is determined. Thus, scientific progress is possible without compromise to the precautionary principle.

Monitoring the agricultural landscape for insect resistance

NASA Astrophysics Data System (ADS)

Casas, Joseph; Glaser, J. A.; Copenhaver, Ken

Farmers in 25 countries on six continents are using plant biotechnology to solve difficult crop production challenges and conserve the environment. In fact, 13.3 million farmers, which include 90 percent of the farming in developing countries, choose to plant biotech crops. Over the past decade, farmers increased area planted in genetically modified (GM) crops by more than 10 percent each year, thus increasing their farm income by more than 44 billion US dollars (1996-2007), and achieved economic, environmental and social benefits in crops such as soybeans, canola, corn and cotton. To date, total acres of biotech crops harvested exceed more than 2 billion with a proven 13-year history of safe use. Over the next decade, expanded adoption combined with current research on 57 crops in 63 countries will broaden the advantages of genetically modified foods for growers, consumers and the environment. Genetically modified (GM) crops with the ability to produce toxins lethal to specific insect pests are covering a larger percentage of the agricultural landscape every year. The United States department of Agriculture (USDA) estimated that 63 percent of corn and 65 percent of cotton contained these specific genetic traits in 2009. The toxins could protect billions of dollars of loss from insect damage for crops valued at greater than 165 billion US dollars in 2008. The stable and efficient production of these crops has taken on even more importance in recent years with their use, not only as a food source, but now also a source of fuel. It is in the best interest of the United States Environmental Protection Agency (USEPA) to ensure the continued efficacy of toxin producing GM crops as their use reduces pesticides harmful to humans and animals. However, population genetics models have indicated the risk of insect pests developing resistance to these toxins if a high percentage of acreage is grown in these crops. The USEPA is developing methods to monitor the agricultural landscape to ensure resistance is not developing. USEPA is teaming with NASA to perform this monitoring using models and NASA earth observation imagery from airborne and satellite platforms. Using multiple spatial, temporal and spectral resolutions, the project is monitoring the entire Midwestern "Corn Belt". By applying these methods, the project has successfully delineated insect infestations in genetically modified corn fields. Insect resistance development is expected to present itself as infestations thus indicating potential identification of resistance if it develops in genetically modified crops. The USEPA and NASA are currently considering the development of plans to potentially extend this aircraft research to other crops and develop a micro-satellite application.

Genetically modified crops and aquatic ecosystems: considerations for environmental risk assessment and non-target organism testing.

PubMed

Carstens, Keri; Anderson, Jennifer; Bachman, Pamela; De Schrijver, Adinda; Dively, Galen; Federici, Brian; Hamer, Mick; Gielkens, Marco; Jensen, Peter; Lamp, William; Rauschen, Stefan; Ridley, Geoff; Romeis, Jörg; Waggoner, Annabel

2012-08-01

Environmental risk assessments (ERA) support regulatory decisions for the commercial cultivation of genetically modified (GM) crops. The ERA for terrestrial agroecosystems is well-developed, whereas guidance for ERA of GM crops in aquatic ecosystems is not as well-defined. The purpose of this document is to demonstrate how comprehensive problem formulation can be used to develop a conceptual model and to identify potential exposure pathways, using Bacillus thuringiensis (Bt) maize as a case study. Within problem formulation, the insecticidal trait, the crop, the receiving environment, and protection goals were characterized, and a conceptual model was developed to identify routes through which aquatic organisms may be exposed to insecticidal proteins in maize tissue. Following a tiered approach for exposure assessment, worst-case exposures were estimated using standardized models, and factors mitigating exposure were described. Based on exposure estimates, shredders were identified as the functional group most likely to be exposed to insecticidal proteins. However, even using worst-case assumptions, the exposure of shredders to Bt maize was low and studies supporting the current risk assessments were deemed adequate. Determining if early tier toxicity studies are necessary to inform the risk assessment for a specific GM crop should be done on a case by case basis, and should be guided by thorough problem formulation and exposure assessment. The processes used to develop the Bt maize case study are intended to serve as a model for performing risk assessments on future traits and crops.

Safety assessment of foods from genetically modified crops in countries with developing economies.

PubMed

Delaney, Bryan

2015-12-01

Population growth particularly in countries with developing economies will result in a need to increase food production by 70% by the year 2050. Biotechnology has been utilized to produce genetically modified (GM) crops for insect and weed control with benefits including increased crop yield and will also be used in emerging countries. A multicomponent safety assessment paradigm has been applied to individual GM crops to determine whether they as safe as foods from non-GM crops. This paper reviews methods to assess the safety of foods from GM crops for safe consumption from the first generation of GM crops. The methods can readily be applied to new products developed within country and this paper will emphasize the concept of data portability; that safety data produced in one geographic location is suitable for safety assessment regardless of where it is utilized. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

Not all GMOs are crop plants: non-plant GMO applications in agriculture

USDA-ARS?s Scientific Manuscript database

In the time since the tools of modern biotechnology have become available, the most commonly applied and often discussed genetically modified organisms are genetically modified crop plants, although genetic engineering is also being used successfully in organisms other than plants, including bacteri...

The use of whole food animal studies in the safety assessment of genetically modified crops: Limitations and recommendations

PubMed Central

Bartholomaeus, Andrew; Parrott, Wayne; Bondy, Genevieve

2013-01-01

There is disagreement internationally across major regulatory jurisdictions on the relevance and utility of whole food (WF) toxicity studies on GM crops, with no harmonization of data or regulatory requirements. The scientific value, and therefore animal ethics, of WF studies on GM crops is a matter addressable from the wealth of data available on commercialized GM crops and WF studies on irradiated foods. We reviewed available GM crop WF studies and considered the extent to which they add to the information from agronomic and compositional analyses. No WF toxicity study was identified that convincingly demonstrated toxicological concern or that called into question the adequacy, sufficiency, and reliability of safety assessments based on crop molecular characterization, transgene source, agronomic characteristics, and/or compositional analysis of the GM crop and its near-isogenic line. Predictions of safety based on crop genetics and compositional analyses have provided complete concordance with the results of well-conducted animal testing. However, this concordance is primarily due to the improbability of de novo generation of toxic substances in crop plants using genetic engineering practices and due to the weakness of WF toxicity studies in general. Thus, based on the comparative robustness and reliability of compositional and agronomic considerations and on the absence of any scientific basis for a significant potential for de novo generation of toxicologically significant compositional alterations as a sole result of transgene insertion, the conclusion of this review is that WF animal toxicity studies are unnecessary and scientifically unjustifiable. PMID:24164514

Expert opinion vs. empirical evidence: the precautionary principle applied to GM crops.

PubMed

Herman, Rod A; Raybould, Alan

2014-01-01

Expert opinion is often sought by government regulatory agencies when there is insufficient empirical evidence to judge the safety implications of a course of action. However, it can be reckless to continue following expert opinion when a preponderance of evidence is amassed that conflicts with this opinion. Factual evidence should always trump opinion in prioritizing the information that is used to guide regulatory policy. Evidence-based medicine has seen a dramatic upturn in recent years spurred by examples where evidence indicated that certain treatments recommended by expert opinions increased death rates. We suggest that scientific evidence should also take priority over expert opinion in the regulation of genetically modified crops (GM). Examples of regulatory data requirements that are not justified based on the mass of evidence are described, and it is suggested that expertise in risk assessment should guide evidence-based regulation of GM crops.

Risk, regulation and biotechnology: The case of GM crops

PubMed Central

Smyth, Stuart J; Phillips, Peter WB

2014-01-01

The global regulation of products of biotechnology is increasingly divided. Regulatory decisions for genetically modified (GM) crops in North America are predictable and efficient, with numerous countries in Latin and South America, Australia and Asia following this lead. While it might have been possible to argue that Europe's regulations were at one time based on real concerns about minimizing risks and ensuring health and safety, it is increasingly apparent that the entire European Union (EU) regulatory system for GM crops and foods is now driven by political agendas. Countries within the EU are at odds with each other as some have commercial production of GM crops, while others refuse to even develop regulations that could provide for the commercial release of GM crops. This divide in regulatory decision-making is affecting international grain trade, creating challenges for feeding an increasing global population. PMID:25437235

Assuring the safety of genetically modified (GM) foods: the importance of an holistic, integrative approach.

PubMed

Cockburn, Andrew

2002-09-11

Genes change continuously by natural mutation and recombination enabling man to select and breed crops having the most desirable traits such as yield or flavour. Genetic modification (GM) is a recent development which allows specific genes to be identified, isolated, copied and inserted into other plants with a high level of specificity. The food safety considerations for GM crops are basically the same as those arising from conventionally bred crops, very few of which have been subject to any testing yet are generally regarded as being safe to eat. In contrast a rigorous safety testing paradigm has been developed for GM crops, which utilises a systematic, stepwise and holistic approach. The resultant science based process, focuses on a classical evaluation of the toxic potential of the introduced novel trait and the wholesomeness of the transformed crop. In addition, detailed consideration is given to the history and safe use of the parent crop as well as that of the gene donor. The overall safety evaluation is conducted under the concept known as substantial equivalence which is enshrined in all international crop biotechnology guidelines. This provides the framework for a comparative approach to identify the similarities and differences between the GM product and its comparator which has a known history of safe use. By building a detailed profile on each step in the transformation process, from parent to new crop, and by thoroughly evaluating the significance from a safety perspective, of any differences that may be detected, a very comprehensive matrix of information is constructed which enables the conclusion as to whether the GM crop, derived food or feed is as safe as its traditional counterpart. Using this approach in the evaluation of more than 50 GM crops which have been approved worldwide, the conclusion has been that foods and feeds derived from genetically modified crops are as safe and nutritious as those derived from traditional crops. The lack of any adverse effects resulting from the production and consumption of GM crops grown on more than 300 million cumulative acres over the last 5 years supports these safety conclusions.

78 FR 25297 - Programmatic Environmental Assessment

Federal Register 2010, 2011, 2012, 2013, 2014

2013-04-30

... environmental assessment (PEA) to evaluate the effects of the cultivation and use of genetically modified crops... genetically modified crops (GMCs) on our Refuge System lands. Our PEA will concentrate on the refuges in our... lands are those that have been evaluated and deregulated by the Animal and Plant Health Inspection...

Evidence for the establishment and persistence of genetically modified canola populations in the U.S.

EPA Science Inventory

Background/Questions/Methods Concerns surrounding the commercial release of genetically modified crops include the risks of escape from cultivation, naturalization, and the transfer of beneficial traits to native and weedy species. Among the crops commonly grown in the U.S., a l...

Could Crop Height Impact the Wind Resource at Agriculturally Productive Wind Farm Sites?

NASA Astrophysics Data System (ADS)

Vanderwende, B. J.; Lundquist, J. K.

2013-12-01

The agriculture-intensive United States Midwest and Great Plains regions feature some of the best wind resources in the nation. Collocation of cropland and wind turbines introduces complex meteorological interactions that could affect both agriculture and wind power production. Crop management practices may modify the wind resource through alterations of land-surface properties. In this study, we used the Weather Research and Forecasting (WRF) model to estimate the impact of crop height variations on the wind resource in the presence of a large turbine array. We parameterized a hypothetical array of 121 1.8 MW turbines at the site of the 2011 Crop/Wind-energy Experiment field campaign using the WRF wind farm parameterization. We estimated the impact of crop choices on power production by altering the aerodynamic roughness length in a region approximately 65 times larger than that occupied by the turbine array. Roughness lengths of 10 cm and 25 cm represent a mature soy crop and a mature corn crop respectively. Results suggest that the presence of the mature corn crop reduces hub-height wind speeds and increases rotor-layer wind shear, even in the presence of a large wind farm which itself modifies the flow. During the night, the influence of the surface was dependent on the boundary layer stability, with strong stability inhibiting the surface drag from modifying the wind resource aloft. Further investigation is required to determine the optimal size, shape, and crop height of the roughness modification to maximize the economic benefit and minimize the cost of such crop management practices.

Challenges in testing genetically modified crops for potential increases in endogenous allergen expression for safety.

PubMed

Panda, R; Ariyarathna, H; Amnuaycheewa, P; Tetteh, A; Pramod, S N; Taylor, S L; Ballmer-Weber, B K; Goodman, R E

2013-02-01

Premarket, genetically modified (GM) plants are assessed for potential risks of food allergy. The major risk would be transfer of a gene encoding an allergen or protein nearly identical to an allergen into a different food source, which can be assessed by specific serum testing. The potential that a newly expressed protein might become an allergen is evaluated based on resistance to digestion in pepsin and abundance in food fractions. If the modified plant is a common allergenic source (e.g. soybean), regulatory guidelines suggest testing for increases in the expression of endogenous allergens. Some regulators request evaluating endogenous allergens for rarely allergenic plants (e.g. maize and rice). Since allergic individuals must avoid foods containing their allergen (e.g. peanut, soybean, maize, or rice), the relevance of the tests is unclear. Furthermore, no acceptance criteria are established and little is known about the natural variation in allergen concentrations in these crops. Our results demonstrate a 15-fold difference in the major maize allergen, lipid transfer protein between nine varieties, and complex variation in IgE binding to various soybean varieties. We question the value of evaluating endogenous allergens in GM plants unless the intent of the modification was production of a hypoallergenic crop. © 2012 John Wiley & Sons A/S.

Winter cover crops on processing tomato yield, quality, pest pressure, nitrogen availability, and profit margins.

PubMed

Belfry, Kimberly D; Trueman, Cheryl; Vyn, Richard J; Loewen, Steven A; Van Eerd, Laura L

2017-01-01

Much of cover crop research to date focuses on key indicators of impact without considering the implications over multiple years, in the absence of a systems-based approach. To evaluate the effect of three years of autumn cover crops on subsequent processing tomato (Solanum lycopersicum L.) production in 2010 and 2011, a field split-split-plot factorial design trial with effects of cover crop type, urea ammonium nitrate fertilizer rate (0 or 140 kg N ha-1 preplant broadcast incorporated) and tomato cultivar (early vs. late) was conducted. The main plot factor, cover crop, included a no cover crop control, oat (Avena sativa L.), winter cereal rye (hereafter referred to as rye) (Secale cereale L.), oilseed radish (OSR) (Raphanus sativus L. var. oleiferus Metzg Stokes), and mix of OSR and rye (OSR + rye) treatments. Cover crop biomass of 0.5 to 2.8 and 1.7 to 3.1 Mg ha-1 was attained in early Oct. and the following early May, respectively. In general, OSR increased soil mineral N during cover crop growth and into the succeeding summer tomato growing season, while the remaining cover crops did not differ from the no cover crop control. The lack of a cover crop by N rate interaction in soil and plant N analyses at harvest suggests that growers may not need to modify N fertilizer rates to tomatoes based on cover crop type. Processing tomato fruit quality at harvest (rots, insect or disease damage, Agtron colour, pH, or natural tomato soluble solids (NTSS)) was not affected by cover crop type. In both years, marketable yield in the no cover crop treatment was lower or not statistically different than all planted cover crops. Partial profit margins over both years were 1320 $ ha-1 higher with OSR and $960 higher with oat compared to the no cover crop control. Thus, results from a systems-based approach suggest that the cover crops tested had no observed negative impact on processing tomato production and have the potential to increase marketable yield and profit margins.

Winter cover crops on processing tomato yield, quality, pest pressure, nitrogen availability, and profit margins

PubMed Central

Belfry, Kimberly D.; Trueman, Cheryl; Vyn, Richard J.; Loewen, Steven A.; Van Eerd, Laura L.

2017-01-01

Much of cover crop research to date focuses on key indicators of impact without considering the implications over multiple years, in the absence of a systems-based approach. To evaluate the effect of three years of autumn cover crops on subsequent processing tomato (Solanum lycopersicum L.) production in 2010 and 2011, a field split-split-plot factorial design trial with effects of cover crop type, urea ammonium nitrate fertilizer rate (0 or 140 kg N ha-1 preplant broadcast incorporated) and tomato cultivar (early vs. late) was conducted. The main plot factor, cover crop, included a no cover crop control, oat (Avena sativa L.), winter cereal rye (hereafter referred to as rye) (Secale cereale L.), oilseed radish (OSR) (Raphanus sativus L. var. oleiferus Metzg Stokes), and mix of OSR and rye (OSR + rye) treatments. Cover crop biomass of 0.5 to 2.8 and 1.7 to 3.1 Mg ha-1 was attained in early Oct. and the following early May, respectively. In general, OSR increased soil mineral N during cover crop growth and into the succeeding summer tomato growing season, while the remaining cover crops did not differ from the no cover crop control. The lack of a cover crop by N rate interaction in soil and plant N analyses at harvest suggests that growers may not need to modify N fertilizer rates to tomatoes based on cover crop type. Processing tomato fruit quality at harvest (rots, insect or disease damage, Agtron colour, pH, or natural tomato soluble solids (NTSS)) was not affected by cover crop type. In both years, marketable yield in the no cover crop treatment was lower or not statistically different than all planted cover crops. Partial profit margins over both years were 1320 $ ha-1 higher with OSR and $960 higher with oat compared to the no cover crop control. Thus, results from a systems-based approach suggest that the cover crops tested had no observed negative impact on processing tomato production and have the potential to increase marketable yield and profit margins. PMID:28683080

LONG DISTANCE POLLEN-MEDIATED GENE FLOW FROM CREEPING BENTGRASS

EPA Science Inventory

Researchers from USEPA WED have measured gene flow from experimental fields of Roundup? herbicide resistant genetically modified (GM) creeping bentgrass a grass used primarily on golf courses, to compatible non-crop relatives. Using a sampling design based on the estimated time ...

Multigeneration reproductive and developmental toxicity study of bar gene inserted into genetically modified potato on rats.

PubMed

Rhee, Gyu Seek; Cho, Dae Hyun; Won, Yong Hyuck; Seok, Ji Hyun; Kim, Soon Sun; Kwack, Seung Jun; Lee, Rhee Da; Chae, Soo Yeong; Kim, Jae Woo; Lee, Byung Mu; Park, Kui Lea; Choi, Kwang Sik

2005-12-10

Each specific protein has an individual gene encoding it, and a foreign gene introduced to a plant can be used to synthesize a new protein. The identification of potential reproductive and developmental toxicity from novel proteins produced by genetically modified (GM) crops is a difficult task. A science-based risk assessment is needed in order to use GM crops as a conventional foodstuff. In this study, the specific characteristics of GM food and low-level chronic exposure were examined using a five-generation animal study. In each generation, rats were fed a solid pellet containing 5% GM potato and non-GM potato for 10 wk prior to mating in order to assess the potential reproductive and developmental toxic effects. In the multigeneration animal study, there were no GM potato-related changes in body weight, food consumption, reproductive performance, and organ weight. Polymerase chain reaction (PCR) was carried out using extracted genomic DNA to examine the possibility of gene persistence in the organ tissues after a long-term exposure to low levels of GM feed. In each generation, the gene responsible for bar was not found in any of the reproductive organs of the GM potato-treated male and female rats, and the litter-related indexes did not show any genetically modified organism (GMO)-related changes. The results suggest that genetically modified crops have no adverse effects on the multigeneration reproductive-developmental ability.

ASSESSING POSSIBLE ECOLOGICAL RISKS OF GENETICALLY MODIFIED CROPS: GENE EXPRESSION ASSAYS AND GENETIC MONITORING OF NON-TARGET ORGANISMS

EPA Science Inventory

Widespread planting of genetically modified crops with the Bt transgene pesticide has led to concern over non-target effects of Bt compounds in agroecosystems. While some research suggests that non-target organisms exposed to Bt toxin exhibit reduced fecundity and increased morta...

Food Allergy - Basic Mechanisms and Applications to Identifying Risks Associated with Plant Incorporated Pesticides and Other Genetically Modified Crops

EPA Science Inventory

Food allergy is a relatively new concern for toxicologists as a result of the incorporation of novel proteins into food crops in order to promote resistance to pests and other stresses, improve nutrition, or otherwise modify the phenotype. Food allergy can manifest as inflammatio...

Optimization on Paddy Crops in Central Java (with Solver, SVD on Least Square and ACO (Ant Colony Algorithm))

NASA Astrophysics Data System (ADS)

Parhusip, H. A.; Trihandaru, S.; Susanto, B.; Prasetyo, S. Y. J.; Agus, Y. H.; Simanjuntak, B. H.

2017-03-01

Several algorithms and objective functions on paddy crops have been studied to get optimal paddy crops in Central Java based on the data given from Surakarta and Boyolali. The algorithms are linear solver, least square and Ant Colony Algorithms (ACO) to develop optimization procedures on paddy crops modelled with Modified GSTAR (Generalized Space-Time Autoregressive) and nonlinear models where the nonlinear models are quadratic and power functions. The studied data contain paddy crops from Surakarta and Boyolali determining the best period of planting in the year 1992-2012 for Surakarta where 3 periods for planting are known and the optimal amount of paddy crops in Boyolali in the year 2008-2013. Having these analyses may guide the local agriculture government to give a decision on rice sustainability in its region. The best period for planting in Surakarta is observed, i.e. the best period is in September-December based on the data 1992-2012 by considering the planting area, the cropping area, and the paddy crops are the most important factors to be taken into account. As a result, we can refer the paddy crops in this best period (about 60.4 thousand tons per year) as the optimal results in 1992-2012 where the used objective function is quadratic. According to the research, the optimal paddy crops in Boyolali about 280 thousand tons per year where the studied factors are the amount of rainfalls, the harvested area and the paddy crops in 2008-2013. In this case, linear and power functions are studied to be the objective functions. Compared to all studied algorithms, the linear solver is still recommended to be an optimization tool for a local agriculture government to predict paddy crops in future.

Genetically modified crops and small-scale farmers: main opportunities and challenges.

PubMed

Azadi, Hossein; Samiee, Atry; Mahmoudi, Hossein; Jouzi, Zeynab; Khachak, Parisa Rafiaani; De Maeyer, Philippe; Witlox, Frank

2016-01-01

Although some important features of genetically modified (GM) crops such as insect resistance, herbicide tolerance, and drought tolerance might seem to be beneficial for small-scale farmers, the adoption of GM technology by smallholders is still slight. Identifying pros and cons of using this technology is important to understand the impacts of GM crops on these farmers. This article reviews the main opportunities and challenges of GM crops for small-scale farmers in developing countries. The most significant advantages of GM crops include being independent to farm size, environment protection, improvement of occupational health issues, and the potential of bio-fortified crops to reduce malnutrition. Challenges faced by small-scale farmers for adoption of GM crops comprise availability and accessibility of GM crop seeds, seed dissemination and price, and the lack of adequate information. In addition, R&D and production costs in using GM crops make it difficult for these farmers to adopt the use of these crops. Moreover, intellectual property right regulations may deprive resource poor farmers from the advantages of GM technology. Finally, concerns on socio-economic and environment safety issues are also addressed in this paper.

Integrated weed management systems with herbicide-tolerant crops in the European Union: lessons learnt from home and abroad.

PubMed

Lamichhane, Jay Ram; Devos, Yann; Beckie, Hugh J; Owen, Micheal D K; Tillie, Pascal; Messéan, Antoine; Kudsk, Per

2017-06-01

Conventionally bred (CHT) and genetically modified herbicide-tolerant (GMHT) crops have changed weed management practices and made an important contribution to the global production of some commodity crops. However, a concern is that farm management practices associated with the cultivation of herbicide-tolerant (HT) crops further deplete farmland biodiversity and accelerate the evolution of herbicide-resistant (HR) weeds. Diversification in crop systems and weed management practices can enhance farmland biodiversity, and reduce the risk of weeds evolving herbicide resistance. Therefore, HT crops are most effective and sustainable as a component of an integrated weed management (IWM) system. IWM advocates the use of multiple effective strategies or tactics to manage weed populations in a manner that is economically and environmentally sound. In practice, however, the potential benefits of IWM with HT crops are seldom realized because a wide range of technical and socio-economic factors hamper the transition to IWM. Here, we discuss the major factors that limit the integration of HT crops and their associated farm management practices in IWM systems. Based on the experience gained in countries where CHT or GMHT crops are widely grown and the increased familiarity with their management, we propose five actions to facilitate the integration of HT crops in IWM systems within the European Union.

Proteomic evaluation of genetically modified crops: current status and challenges

PubMed Central

Gong, Chun Yan; Wang, Tai

2013-01-01

Hectares of genetically modified (GM) crops have increased exponentially since 1996, when such crops began to be commercialized. GM biotechnology, together with conventional breeding, has become the main approach to improving agronomic traits of crops. However, people are concerned about the safety of GM crops, especially GM-derived food and feed. Many efforts have been made to evaluate the unintended effects caused by the introduction of exogenous genes. “Omics” techniques have advantages over targeted analysis in evaluating such crops because of their use of high-throughput screening. Proteins are key players in gene function and are directly involved in metabolism and cellular development or have roles as toxins, antinutrients, or allergens, which are essential for human health. Thus, proteomics can be expected to become one of the most useful tools in safety assessment. This review assesses the potential of proteomics in evaluating various GM crops. We further describe the challenges in ensuring homogeneity and sensitivity in detection techniques. PMID:23471542

Proteomic evaluation of genetically modified crops: current status and challenges.

PubMed

Gong, Chun Yan; Wang, Tai

2013-01-01

Hectares of genetically modified (GM) crops have increased exponentially since 1996, when such crops began to be commercialized. GM biotechnology, together with conventional breeding, has become the main approach to improving agronomic traits of crops. However, people are concerned about the safety of GM crops, especially GM-derived food and feed. Many efforts have been made to evaluate the unintended effects caused by the introduction of exogenous genes. "Omics" techniques have advantages over targeted analysis in evaluating such crops because of their use of high-throughput screening. Proteins are key players in gene function and are directly involved in metabolism and cellular development or have roles as toxins, antinutrients, or allergens, which are essential for human health. Thus, proteomics can be expected to become one of the most useful tools in safety assessment. This review assesses the potential of proteomics in evaluating various GM crops. We further describe the challenges in ensuring homogeneity and sensitivity in detection techniques.

A bioinformatics approach for identifying transgene insertion sites using whole genome sequencing data.

PubMed

Park, Doori; Park, Su-Hyun; Ban, Yong Wook; Kim, Youn Shic; Park, Kyoung-Cheul; Kim, Nam-Soo; Kim, Ju-Kon; Choi, Ik-Young

2017-08-15

Genetically modified crops (GM crops) have been developed to improve the agricultural traits of modern crop cultivars. Safety assessments of GM crops are of paramount importance in research at developmental stages and before releasing transgenic plants into the marketplace. Sequencing technology is developing rapidly, with higher output and labor efficiencies, and will eventually replace existing methods for the molecular characterization of genetically modified organisms. To detect the transgenic insertion locations in the three GM rice gnomes, Illumina sequencing reads are mapped and classified to the rice genome and plasmid sequence. The both mapped reads are classified to characterize the junction site between plant and transgene sequence by sequence alignment. Herein, we present a next generation sequencing (NGS)-based molecular characterization method, using transgenic rice plants SNU-Bt9-5, SNU-Bt9-30, and SNU-Bt9-109. Specifically, using bioinformatics tools, we detected the precise insertion locations and copy numbers of transfer DNA, genetic rearrangements, and the absence of backbone sequences, which were equivalent to results obtained from Southern blot analyses. NGS methods have been suggested as an effective means of characterizing and detecting transgenic insertion locations in genomes. Our results demonstrate the use of a combination of NGS technology and bioinformatics approaches that offers cost- and time-effective methods for assessing the safety of transgenic plants.

Biosafety management and commercial use of genetically modified crops in China.

PubMed

Li, Yunhe; Peng, Yufa; Hallerman, Eric M; Wu, Kongming

2014-04-01

As a developing country with relatively limited arable land, China is making great efforts for development and use of genetically modified (GM) crops to boost agricultural productivity. Many GM crop varieties have been developed in China in recent years; in particular, China is playing a leading role in development of insect-resistant GM rice lines. To ensure the safe use of GM crops, biosafety risk assessments are required as an important part of the regulatory oversight of such products. With over 20 years of nationwide promotion of agricultural biotechnology, a relatively well-developed regulatory system for risk assessment and management of GM plants has been developed that establishes a firm basis for safe use of GM crops. So far, a total of seven GM crops involving ten events have been approved for commercial planting, and 5 GM crops with a total of 37 events have been approved for import as processing material in China. However, currently only insect-resistant Bt cotton and disease-resistant papaya have been commercially planted on a large scale. The planting of Bt cotton and disease-resistant papaya have provided efficient protection against cotton bollworms and Papaya ringspot virus (PRSV), respectively. As a consequence, chemical application to these crops has been significantly reduced, enhancing farm income while reducing human and non-target organism exposure to toxic chemicals. This article provides useful information for the colleagues, in particular for them whose mother tongue is not Chinese, to clearly understand the biosafety regulation and commercial use of genetically modified crops in China.

The myth of natural barriers. Is transgene introgression by genetically modified crops an environmental risk?

PubMed

Guarnieri, Vincenzo; Benessia, Alice; Camino, Elena; Barbiero, Giuseppe

2008-01-01

Genetically modified (GM) crops under open field conditions are a complex and controversial issue. Ecologists are discussing about the possibility that a transgene belonging to GM plants could spread to native populations through a process known as introgression the stable incorporation of a gene in the host genome able to generate a differentiated population. The ecological consequences of a transgene introgression in plants or bacteria are not yet well understood, but could be significant. In this critical review we consider vertical and horizontal introgression. We analyse the biochemical and genetic constraints, and environmental factors that limit the possibility of transgene spread; meanwhile we show cases in which the natural barriers are overcome. Then we discuss the overall management of GM crops, noting the shortcomings and approximations of risk assessment based on linear thinking typical of the biomolecular approach. Finally we suggest to explicitly weight facts together with values and we encourage the undertaking of an ecological perspective, encompassing the complexity of (non-linear) relations between organisms and the environment.

Not all GMOs are crop plants: non-plant GMO applications in agriculture.

PubMed

Hokanson, K E; Dawson, W O; Handler, A M; Schetelig, M F; St Leger, R J

2014-12-01

Since tools of modern biotechnology have become available, the most commonly applied and often discussed genetically modified organisms are genetically modified crop plants, although genetic engineering is also being used successfully in organisms other than plants, including bacteria, fungi, insects, and viruses. Many of these organisms, as with crop plants, are being engineered for applications in agriculture, to control plant insect pests or diseases. This paper reviews the genetically modified non-plant organisms that have been the subject of permit approvals for environmental release by the United States Department of Agriculture/Animal and Plant Health Inspection Service since the US began regulating genetically modified organisms. This is an indication of the breadth and progress of research in the area of non-plant genetically modified organisms. This review includes three examples of promising research on non-plant genetically modified organisms for application in agriculture: (1) insects for insect pest control using improved vector systems; (2) fungal pathogens of insects to control insect pests; and (3) virus for use as transient-expression vectors for disease control in plants.

Genetically Modified Crops and Nuisance: Exploring the Role of Precaution in Private Law

ERIC Educational Resources Information Center

Craik, Neil; Culver, Keith; Siebrasse, Norman

2007-01-01

This article critically considers calls for the precautionary principle to inform judicial decision making in a private law context in light of the Hoffman litigation, where it is alleged that the potential for genetic contamination from genetically modified (GM) crops causes an unreasonable interference with the rights of organic farmers to use…

Development of a qualitative real-time PCR method to detect 19 targets for identification of genetically modified organisms.

PubMed

Peng, Cheng; Wang, Pengfei; Xu, Xiaoli; Wang, Xiaofu; Wei, Wei; Chen, Xiaoyun; Xu, Junfeng

2016-01-01

As the amount of commercially available genetically modified organisms (GMOs) grows recent years, the diversity of target sequences for molecular detection techniques are eagerly needed. Considered as the gold standard for GMO analysis, the real-time PCR technology was optimized to produce a high-throughput GMO screening method. With this method we can detect 19 transgenic targets. The specificity of the assays was demonstrated to be 100 % by the specific amplification of DNA derived from reference material from 20 genetically modified crops and 4 non modified crops. Furthermore, most assays showed a very sensitive detection, reaching the limit of ten copies. The 19 assays are the most frequently used genetic elements present in GM crops and theoretically enable the screening of the known GMO described in Chinese markets. Easy to use, fast and cost efficient, this method approach fits the purpose of GMO testing laboratories.

Occurrence and field densities of Coleoptera in the maize herb layer: implications for Environmental Risk Assessment of genetically modified Bt-maize.

PubMed

Rauschen, Stefan; Schaarschmidt, Frank; Gathmann, Achim

2010-10-01

Beetles (Coleoptera) are a diverse and ecologically important group of insects in agricultural systems. The Environmental Risk Assessment (ERA) of genetically modified Bt-crop varieties with insect resistances thus needs to consider and assess the potential negative impacts on non-target organisms belonging to this group. We analysed data gathered during 6 years of field-release experiments on the impact of two genetically modified Bt-maize varieties (Ostrinia-resistant MON810 and Diabrotica-resistant MON88017) on the occurrence and field densities of Coleoptera, especially the two families Coccinellidae and Chrysomelidae. Based on a statistical analysis aimed at establishing whether Bt-maize varieties are equivalent to their near-isogenic counterparts, we discuss the limitations of using field experiments to assess the effects of Bt-maize on these two beetle families. The densities of most of the beetle families recorded in the herb layer were very low in all growing seasons. Coccinellidae and Chrysomelidae were comparatively abundant and diverse, but still low in numbers. Based on their role as biological control agents, Coccinellidae should be a focus in the ERA of Bt-plants, but given the large natural variability in ladybird densities in the field, most questions need to be addressed in low-tier laboratory tests. Chrysomelidae should play a negligible role in the ERA of Bt-plants, since they occur on-crop as secondary pests only. Species occurring off-crop, however, can be addressed in a similar fashion as non-target Lepidoptera in Cry1Ab expressing Bt-maize.

Application of modified VICAR/IBIS GIS to analysis of July 1991 Flevoland AIRSAR data

NASA Technical Reports Server (NTRS)

Norikane, L.; Broek, B.; Freeman, A.

1992-01-01

Three overflights of the Flevoland calibration/agricultural site were made by the JPL Airborne Synthetic Aperture Radar (AIRSAR) on 3, 12, and 28 July 1991 as part of MAC-Europe '92. A polygon map was generated at TNO-FEL which overlayed the slant range projected July 3 data set. Each polygon was identified by a sequence of points and a crop label. The polygon map was composed of 452 uniquely identified polygons and 15 different crop types. Analysis of the data was done using our modified Video Image Communication and Retrieval/Image Based Information System Geographic Information System (VICAR/IBIS GIS). This GIS is an extension of the VICAR/IBIS GIS first developed by Bryant in the 1970's which is itself an extension of the VICAR image processing system also developed at JPL.

An overview of genetically modified crop governance, issues and challenges in Malaysia.

PubMed

Andrew, Johnny; Ismail, Normaz Wana; Djama, Marcel

2018-01-01

The application of agricultural biotechnology attracts the interest of many stakeholders. Genetically modified (GM) crops, for example, have been rapidly increasing in production for the last 20 years. Despite their known benefits, GM crops also pose many concerns not only to human and animal health but also to the environment. Malaysia, in general, allows the use of GM technology applications but it has to come with precautionary and safety measures consistent with the international obligations and domestic legal frameworks. This paper provides an overview of GM crop technology from international and national context and explores the governance and issues surrounding this technology application in Malaysia. Basically, GM research activities in Malaysia are still at an early stage of research and development and most of the GM crops approved for release are limited for food, feed and processing purposes. Even though Malaysia has not planted any GM crops commercially, actions toward such a direction seem promising. Several issues concerning GM crops as discussed in this paper will become more complex as the number of GM crops and varieties commercialised globally increase and Malaysia starts to plant GM crops. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

Biotech/GM crops in horticulture: plum cv. HoneySweet resistant to plum pox virus

USDA-ARS?s Scientific Manuscript database

Commercialization of Biotech crops started in 1995. By 2011, genetically modified (GM) crops were grown world-wide on 160 million ha. Only 114.507 ha of GM crops were grown in Europe, of that, 114.490 ha were Bt maize and 17 ha were potato for industrial starch production. Currently, developing c...

Multiple transgene traits may create un-intended fitness effects in Brassica napus

EPA Science Inventory

Increasingly, genetically modified crops are being developed to express multiple “stacked” traits for different types of transgenes, for example, herbicide resistance, insect resistance, crop quality and resistance to environmental factors. The release of crops that express mult...

Field testing and exploitation of genetically modified cassava with low-amylose or amylose-free starch in Indonesia.

PubMed

Koehorst-van Putten, H J J; Sudarmonowati, E; Herman, M; Pereira-Bertram, I J; Wolters, A M A; Meima, H; de Vetten, N; Raemakers, C J J M; Visser, R G F

2012-02-01

The development and testing in the field of genetically modified -so called- orphan crops like cassava in tropical countries is still in its infancy, despite the fact that cassava is not only used for food and feed but is also an important industrial crop. As traditional breeding of cassava is difficult (allodiploid, vegetatively propagated, outbreeding species) it is an ideal crop for improvement through genetic modification. We here report on the results of production and field testing of genetically modified low-amylose transformants of commercial cassava variety Adira4 in Indonesia. Twenty four transformants were produced and selected in the Netherlands based on phenotypic and molecular analyses. Nodal cuttings of these plants were sent to Indonesia where they were grown under biosafety conditions. After two screenhouse tests 15 transformants remained for a field trial. The tuberous root yield of 10 transformants was not significantly different from the control. Starch from transformants in which amylose was very low or absent showed all physical and rheological properties as expected from amylose-free cassava starch. The improved functionality of the starch was shown for an adipate acetate starch which was made into a tomato sauce. This is the first account of a field trial with transgenic cassava which shows that by using genetic modification it is possible to obtain low-amylose cassava plants with commercial potential with good root yield and starch quality.

[Estimating Winter Wheat Nitrogen Vertical Distribution Based on Bidirectional Canopy Reflected Spectrum].

PubMed

Yang, Shao-yuan; Huang, Wen-jiang; Liang, Dong; Uang, Lin-sheng; Yang, Gui-jun; Zhang, Gui-jan; Cai, Shu-Hong

2015-07-01

The vertical distribution of crop nitrogen is increased with plant height, timely and non-damaging measurement of crop nitrogen vertical distribution is critical for the crop production and quality, improving fertilizer utilization and reducing environmental impact. The objective of this study was to discuss the method of estimating winter wheat nitrogen vertical distribution by exploring bidirectional reflectance distribution function (BRDF) data using partial least square (PLS) algorithm. The canopy reflectance at nadir, +/-50 degrees and +/- 60 degrees; at nadir, +/- 30 degrees and +/- 40 degrees; and at nadir, +/- 20 degrees and +/- 30 degrees were selected to estimate foliage nitrogen density (FND) at upper layer, middle layer and bottom layer, respectively. Three PLS analysis models with FND as the dependent variable and vegetation indices at corresponding angles as the explicative variables were. established. The impact of soil reflectance and the canopy non-photosynthetic materials, was minimized by seven kinds of modifying vegetation indices with the ratio R700/R670. The estimated accuracy is significant raised at upper layer, middle layer and bottom layer in modeling experiment. Independent model verification selected the best three vegetation indices for further research. The research result showed that the modified Green normalized difference vegetation index (GNDVI) shows better performance than other vegetation indices at each layer, which means modified GNDVI could be used in estimating winter wheat nitrogen vertical distribution

A Meta-Analysis of Effects of Bt Crops on Honey Bees (Hymenoptera: Apidae)

PubMed Central

Duan, Jian J.; Marvier, Michelle; Huesing, Joseph; Dively, Galen; Huang, Zachary Y.

2008-01-01

Background Honey bees (Apis mellifera L.) are the most important pollinators of many agricultural crops worldwide and are a key test species used in the tiered safety assessment of genetically engineered insect-resistant crops. There is concern that widespread planting of these transgenic crops could harm honey bee populations. Methodology/Principal Findings We conducted a meta-analysis of 25 studies that independently assessed potential effects of Bt Cry proteins on honey bee survival (or mortality). Our results show that Bt Cry proteins used in genetically modified crops commercialized for control of lepidopteran and coleopteran pests do not negatively affect the survival of either honey bee larvae or adults in laboratory settings. Conclusions/Significance Although the additional stresses that honey bees face in the field could, in principle, modify their susceptibility to Cry proteins or lead to indirect effects, our findings support safety assessments that have not detected any direct negative effects of Bt crops for this vital insect pollinator. PMID:18183296

Do genetically modified crops affect animal reproduction? A review of the ongoing debate.

PubMed

Zhang, W; Shi, F

2011-05-01

In the past few years, genetically modified (GM) crops aimed at producing food/feed that became part of the regular agriculture in many areas of the world. However, we are uncertain whether GM food and feed can exert potential adverse effects on humans or animals. Of importance, the reproductive toxicology of GM crops has been studied using a number of methods, and by feeding GM crops to a number species of animals to ensure the safety assessment of GM food and feed. It appears that there are no adverse effects of GM crops on many species of animals in acute and short-term feeding studies, but serious debates of effects of long-term and multigenerational feeding studies remain. The aims of this review are to focus on the latest (last 3 to 4 years) findings and debates on reproduction of male and female animals after feeding daily diets containing the GM crops, and to present the possible mechanism(s) to explain their influences.

Assessment of Genetically Modified Soybean in Relation to Natural Variation in the Soybean Seed Metabolome

PubMed Central

Clarke, Joseph D.; Alexander, Danny C.; Ward, Dennis P.; Ryals, John A.; Mitchell, Matthew W.; Wulff, Jacob E.; Guo, Lining

2013-01-01

Genetically modified (GM) crops currently constitute a significant and growing part of agriculture. An important aspect of GM crop adoption is to demonstrate safety and equivalence with respect to conventional crops. Untargeted metabolomics has the ability to profile diverse classes of metabolites and thus could be an adjunct for GM crop substantial equivalence assessment. To account for environmental effects and introgression of GM traits into diverse genetic backgrounds, we propose that the assessment for GM crop metabolic composition should be understood within the context of the natural variation for the crop. Using a non-targeted metabolomics platform, we profiled 169 metabolites and established their dynamic ranges from the seeds of 49 conventional soybean lines representing the current commercial genetic diversity. We further demonstrated that the metabolome of a GM line had no significant deviation from natural variation within the soybean metabolome, with the exception of changes in the targeted engineered pathway. PMID:24170158

Genetically Modified Crops and Food Security

PubMed Central

Qaim, Matin; Kouser, Shahzad

2013-01-01

The role of genetically modified (GM) crops for food security is the subject of public controversy. GM crops could contribute to food production increases and higher food availability. There may also be impacts on food quality and nutrient composition. Finally, growing GM crops may influence farmers’ income and thus their economic access to food. Smallholder farmers make up a large proportion of the undernourished people worldwide. Our study focuses on this latter aspect and provides the first ex post analysis of food security impacts of GM crops at the micro level. We use comprehensive panel data collected over several years from farm households in India, where insect-resistant GM cotton has been widely adopted. Controlling for other factors, the adoption of GM cotton has significantly improved calorie consumption and dietary quality, resulting from increased family incomes. This technology has reduced food insecurity by 15–20% among cotton-producing households. GM crops alone will not solve the hunger problem, but they can be an important component in a broader food security strategy. PMID:23755155

Genetically modified crops and food security.

PubMed

Qaim, Matin; Kouser, Shahzad

2013-01-01

The role of genetically modified (GM) crops for food security is the subject of public controversy. GM crops could contribute to food production increases and higher food availability. There may also be impacts on food quality and nutrient composition. Finally, growing GM crops may influence farmers' income and thus their economic access to food. Smallholder farmers make up a large proportion of the undernourished people worldwide. Our study focuses on this latter aspect and provides the first ex post analysis of food security impacts of GM crops at the micro level. We use comprehensive panel data collected over several years from farm households in India, where insect-resistant GM cotton has been widely adopted. Controlling for other factors, the adoption of GM cotton has significantly improved calorie consumption and dietary quality, resulting from increased family incomes. This technology has reduced food insecurity by 15-20% among cotton-producing households. GM crops alone will not solve the hunger problem, but they can be an important component in a broader food security strategy.

[Agricultural biotechnology safety assessment].

PubMed

McClain, Scott; Jones, Wendelyn; He, Xiaoyun; Ladics, Gregory; Bartholomaeus, Andrew; Raybould, Alan; Lutter, Petra; Xu, Haibin; Wang, Xue

2015-01-01

Genetically modified (GM) crops were first introduced to farmers in 1995 with the intent to provide better crop yield and meet the increasing demand for food and feed. GM crops have evolved to include a thorough safety evaluation for their use in human food and animal feed. Safety considerations begin at the level of DNA whereby the inserted GM DNA is evaluated for its content, position and stability once placed into the crop genome. The safety of the proteins coded by the inserted DNA and potential effects on the crop are considered, and the purpose is to ensure that the transgenic novel proteins are safe from a toxicity, allergy, and environmental perspective. In addition, the grain that provides the processed food or animal feed is also tested to evaluate its nutritional content and identify unintended effects to the plant composition when warranted. To provide a platform for the safety assessment, the GM crop is compared to non-GM comparators in what is typically referred to as composition equivalence testing. New technologies, such as mass spectrometry and well-designed antibody-based methods, allow better analytical measurements of crop composition, including endogenous allergens. Many of the analytical methods and their intended uses are based on regulatory guidance documents, some of which are outlined in globally recognized documents such as Codex Alimentarius. In certain cases, animal models are recommended by some regulatory agencies in specific countries, but there is typically no hypothesis or justification of their use in testing the safety of GM crops. The quality and standardization of testing methods can be supported, in some cases, by employing good laboratory practices (GLP) and is recognized in China as important to ensure quality data. Although the number of recommended, in some cases, required methods for safety testing are increasing in some regulatory agencies, it should be noted that GM crops registered to date have been shown to be comparable to their nontransgenic counterparts and safe . The crops upon which GM development are based are generally considered safe.

The influence of crop production and socioeconomic factors on seasonal household dietary diversity in Burkina Faso.

PubMed

Somé, Jérôme W; Jones, Andrew D

2018-01-01

Households in low-income settings are vulnerable to seasonal changes in dietary diversity because of fluctuations in food availability and access. We assessed seasonal differences in household dietary diversity in Burkina Faso, and determined the extent to which household socioeconomic status and crop production diversity modify changes in dietary diversity across seasons, using data from the nationally representative 2014 Burkina Faso Continuous Multisectoral Survey (EMC). A household dietary diversity score based on nine food groups was created from household food consumption data collected during four rounds of the 2014 EMC. Plot-level crop production data, and data on household assets and education were used to create variables on crop diversity and household socioeconomic status, respectively. Analyses included data for 10,790 households for which food consumption data were available for at least one round. Accounting for repeated measurements and controlling for the complex survey design and confounding covariates using a weighted multi-level model, household dietary diversity was significantly higher during both lean seasons periods, and higher still during the harvest season as compared to the post-harvest season (mean: post-harvest: 4.76 (SE 0.04); beginning of lean: 5.13 (SE 0.05); end of lean: 5.21 (SE 0.05); harvest: 5.72 (SE 0.04)), but was not different between the beginning and the end of lean season. Seasonal differences in household dietary diversity were greater among households with higher food expenditures, greater crop production, and greater monetary value of crops sale (P<0.05). Seasonal changes in household dietary diversity in Burkina Faso may reflect nutritional differences among agricultural households, and may be modified both by households' socioeconomic status and agricultural characteristics.

Transgenic Crops: Implications for Biodiversity and Sustainable Agriculture

ERIC Educational Resources Information Center

Garcia, Maria Alice; Altieri, Miguel A.

2005-01-01

The potential for genetically modified (GM) crops to threaten biodiversity conservation and sustainable agriculture is substantial. Megadiverse countries and centers of origin and/or diversity of crop species are particularly vulnerable regions. The future of sustainable agriculture may be irreversibly jeopardized by contamination of in situ…

Retrospective Analog Year Analyses Using NASA Satellite Data to Improve USDA's World Agricultural Supply and Demand Estimates

NASA Astrophysics Data System (ADS)

Teng, W. L.; Shannon, H. D.

2011-12-01

The USDA World Agricultural Outlook Board (WAOB) is responsible for monitoring weather and climate impacts on domestic and foreign crop development. One of WAOB's primary goals is to determine the net cumulative effect of weather and climate anomalies on final crop yields. To this end, a broad array of information is consulted, including maps, charts, and time series of recent weather, climate, and crop observations; numerical output from weather and crop models; and reports from the press, USDA attachés, and foreign governments. The resulting agricultural weather assessments are published in the Weekly Weather and Crop Bulletin, to keep farmers, policy makers, and commercial agricultural interests informed of weather and climate impacts on agriculture. Because both the amount and timing of precipitation significantly impact crop yields, WAOB often uses precipitation time series to identify growing seasons with similar weather patterns and help estimate crop yields for the current growing season, based on observed yields in analog years. Although, historically, these analog years are identified through visual inspection, the qualitative nature of this methodology sometimes precludes the definitive identification of the best analog year. One goal of this study is to introduce a more rigorous, statistical approach for identifying analog years. This approach is based on a modified coefficient of determination, termed the analog index (AI). The derivation of AI will be described. Another goal of this study is to compare the performance of AI for time series derived from surface-based observations vs. satellite-based measurements (NASA TRMM and other data). Five study areas and six growing seasons of data were analyzed (2003-2007 as potential analog years and 2008 as the target year). Results thus far show that, for all five areas, crop yield estimates derived from satellite-based precipitation data are closer to measured yields than are estimates derived from surface-based precipitation measurements. Work is continuing to include satellite-based surface soil moisture data and model-assimilated root zone soil moisture. This study is part of a larger effort to improve WAOB estimates by integrating NASA remote sensing observations and research results into WAOB's decision-making environment.

Use of Carabids for the Post-Market Environmental Monitoring of Genetically Modified Crops

PubMed Central

Skoková Habuštová, Oxana; Svobodová, Zdeňka; Cagáň, Ľudovít; Sehnal, František

2017-01-01

Post-market environmental monitoring (PMEM) of genetically modified (GM) crops is required by EU legislation and has been a subject of debate for many years; however, no consensus on the methodology to be used has been reached. We explored the suitability of carabid beetles as surrogates for the detection of unintended effects of GM crops in general PMEM surveillance. Our study combines data on carabid communities from five maize field trials in Central Europe. Altogether, 86 species and 58,304 individuals were collected. Modeling based on the gradual elimination of the least abundant species, or of the fewest categories of functional traits, showed that a trait-based analysis of the most common species may be suitable for PMEM. Species represented by fewer than 230 individuals (all localities combined) should be excluded and species with an abundance higher than 600 should be preserved for statistical analyses. Sixteen species, representing 15 categories of functional traits fulfill these criteria, are typical dominant inhabitants of agroecocoenoses in Central Europe, are easy to determine, and their functional classification is well known. The effect of sampling year is negligible when at least four samples are collected during maize development beginning from 1 April. The recommended methodology fulfills PMEM requirements, including applicability to large-scale use. However, suggested thresholds of carabid comparability should be verified before definitive conclusions are drawn. PMID:28353663

The effect of cropping systems and irrigation management on development of potato early blight

USDA-ARS?s Scientific Manuscript database

Crop and soil management may modify canopy and belowground microclimate. However, their effects on potential development and control of early blight are not well documented. Crop management systems [Status Quo (SQ), Soil Conserving (SC), Soil Improving (SI), Disease Suppressive (DS), and Continuou...

NON-TARGET AND ECOSYSTEM IMPACTS FROM GENETICALLY MODIFIED CROPS CONTAINING PLANT INCORPORATED PROTECTANTS (PIPS)

EPA Science Inventory

The risk of unintended and unexpected adverse impacts on non-target organisms and ecosystems is a key issue in environmental risk assessment of PIP crop plants. While there has been considerable examination of the effects of insect resistant crops on certain non-target organisms...

Looking forward to genetically edited fruit crops.

PubMed

Nagamangala Kanchiswamy, Chidananda; Sargent, Daniel James; Velasco, Riccardo; Maffei, Massimo E; Malnoy, Mickael

2015-02-01

The availability of genome sequences for many fruit crops has redefined the boundaries of genetic engineering and genetically modified (GM) crop plants. However commercialization of GM crops is hindered by numerous regulatory and social hurdles. Here, we focus on recently developed genome-editing tools for fruit crop improvement and their importance from the consumer perspective. Challenges and opportunities for the deployment of new genome-editing tools for fruit plants are also discussed. Copyright © 2014 Elsevier Ltd. All rights reserved.

The food and environmental safety of Bt crops.

PubMed

Koch, Michael S; Ward, Jason M; Levine, Steven L; Baum, James A; Vicini, John L; Hammond, Bruce G

2015-01-01

Bacillus thuringiensis (Bt) microbial pesticides have a 50-year history of safety in agriculture. Cry proteins are among the active insecticidal ingredients in these pesticides, and genes coding for Cry proteins have been introduced into agricultural crops using modern biotechnology. The Cry gene sequences are often modified to enable effective expression in planta and several Cry proteins have been modified to increase biological activity against the target pest(s). Additionally, the domains of different but structurally conserved Cry proteins can be combined to produce chimeric proteins with enhanced insecticidal properties. Environmental studies are performed and include invertebrates, mammals, and avian species. Mammalian studies used to support the food and feed safety assessment are also used to support the wild mammal assessment. In addition to the NTO assessment, the environmental assessment includes a comparative assessment between the Bt crop and the appropriate conventional control that is genetically similar but lacks the introduced trait to address unintended effects. Specific phenotypic, agronomic, and ecological characteristics are measured in the Bt crop and the conventional control to evaluate whether the introduction of the insect resistance has resulted in any changes that might cause ecological harm in terms of altered weed characteristics, susceptibility to pests, or adverse environmental impact. Additionally, environmental interaction data are collected in field experiments for Bt crop to evaluate potential adverse effects. Further to the agronomic and phenotypic evaluation, potential movement of transgenes from a genetically modified crop plants into wild relatives is assessed for a new pest resistance gene in a new crop. This review summarizes the evidence for safety of crops containing Cry proteins for humans, livestock, and other non-target organisms.

The food and environmental safety of Bt crops

PubMed Central

Koch, Michael S.; Ward, Jason M.; Levine, Steven L.; Baum, James A.; Vicini, John L.; Hammond, Bruce G.

2015-01-01

Bacillus thuringiensis (Bt) microbial pesticides have a 50-year history of safety in agriculture. Cry proteins are among the active insecticidal ingredients in these pesticides, and genes coding for Cry proteins have been introduced into agricultural crops using modern biotechnology. The Cry gene sequences are often modified to enable effective expression in planta and several Cry proteins have been modified to increase biological activity against the target pest(s). Additionally, the domains of different but structurally conserved Cry proteins can be combined to produce chimeric proteins with enhanced insecticidal properties. Environmental studies are performed and include invertebrates, mammals, and avian species. Mammalian studies used to support the food and feed safety assessment are also used to support the wild mammal assessment. In addition to the NTO assessment, the environmental assessment includes a comparative assessment between the Bt crop and the appropriate conventional control that is genetically similar but lacks the introduced trait to address unintended effects. Specific phenotypic, agronomic, and ecological characteristics are measured in the Bt crop and the conventional control to evaluate whether the introduction of the insect resistance has resulted in any changes that might cause ecological harm in terms of altered weed characteristics, susceptibility to pests, or adverse environmental impact. Additionally, environmental interaction data are collected in field experiments for Bt crop to evaluate potential adverse effects. Further to the agronomic and phenotypic evaluation, potential movement of transgenes from a genetically modified crop plants into wild relatives is assessed for a new pest resistance gene in a new crop. This review summarizes the evidence for safety of crops containing Cry proteins for humans, livestock, and other non-target organisms. PMID:25972882

Case Study: Transgenic Crop Controversy in Costa Rica

ERIC Educational Resources Information Center

Hague, Steve S.

2009-01-01

Costa Rica has rich ecological resources and has been a steady political force in turbulent Central America. Most recently, it has become a battleground between pro- and anti-genetically modified organism (GMO) political forces. This case study examines the roles of U.S.-based cotton ("Gossypium hirsutum" L.) seed companies, anti-GMO…

Assessment of potential adjuvanticity of Cry proteins.

PubMed

Joshi, Saurabh S; Barnett, Brian; Doerrer, Nancy G; Glenn, Kevin; Herman, Rod A; Herouet-Guicheney, Corinne; Hunst, Penny; Kough, John; Ladics, Gregory S; McClain, Scott; Papineni, Sabitha; Poulsen, Lars K; Rascle, Jean-Baptiste; Tao, Ai-Lin; van Ree, Ronald; Ward, Jason; Bowman, Christal C

2016-08-01

Genetically modified (GM) crops have achieved success in the marketplace and their benefits extend beyond the overall increase in harvest yields to include lowered use of insecticides and decreased carbon dioxide emissions. The most widely grown GM crops contain gene/s for targeted insect protection, herbicide tolerance, or both. Plant expression of Bacillus thuringiensis (Bt) crystal (Cry) insecticidal proteins have been the primary way to impart insect resistance in GM crops. Although deemed safe by regulatory agencies globally, previous studies have been the basis for discussions around the potential immuno-adjuvant effects of Cry proteins. These studies had limitations in study design. The studies used animal models with extremely high doses of Cry proteins, which when given using the ig route were co-administered with an adjuvant. Although the presumption exists that Cry proteins may have immunostimulatory activity and therefore an adjuvanticity risk, the evidence shows that Cry proteins are expressed at very low levels in GM crops and are unlikely to function as adjuvants. This conclusion is based on critical review of the published literature on the effects of immunomodulation by Cry proteins, the history of safe use of Cry proteins in foods, safety of the Bt donor organisms, and pre-market weight-of-evidence-based safety assessments for GM crops. Copyright © 2016 Elsevier Inc. All rights reserved.

7 CFR 1410.64 - Transition Incentives Program.

Code of Federal Regulations, 2012 CFR

2012-01-01

... the land to production using sustainable grazing or crop production methods; (3) Modify the CRP... plan; and (3) Implement sustainable grazing or crop production in compliance with the conservation plan...

7 CFR 1410.64 - Transition Incentives Program.

Code of Federal Regulations, 2011 CFR

2011-01-01

... the land to production using sustainable grazing or crop production methods; (3) Modify the CRP... plan; and (3) Implement sustainable grazing or crop production in compliance with the conservation plan...

7 CFR 1410.64 - Transition Incentives Program.

Code of Federal Regulations, 2014 CFR

2014-01-01

... the land to production using sustainable grazing or crop production methods; (3) Modify the CRP... plan; and (3) Implement sustainable grazing or crop production in compliance with the conservation plan...

7 CFR 1410.64 - Transition Incentives Program.

Code of Federal Regulations, 2013 CFR

2013-01-01

... the land to production using sustainable grazing or crop production methods; (3) Modify the CRP... plan; and (3) Implement sustainable grazing or crop production in compliance with the conservation plan...

Ozone phytotoxicity evaluation and prediction of crops production in tropical regions

NASA Astrophysics Data System (ADS)

Mohammed, Nurul Izma; Ramli, Nor Azam; Yahya, Ahmad Shukri

2013-04-01

Increasing ozone concentration in the atmosphere can threaten food security due to its effects on crop production. Since the 1980s, ozone has been believed to be the most damaging air pollutant to crops. In Malaysia, there is no index to indicate the reduction of crops due to the exposure of ozone. Therefore, this study aimed to identify the accumulated exposure over a threshold of X ppb (AOTX) indexes in assessing crop reduction in Malaysia. In European countries, crop response to ozone exposure is mostly expressed as AOT40. This study was designed to evaluate and predict crop reduction in tropical regions and in particular, the Malaysian climate, by adopting the AOT40 index method and modifying it based on Malaysian air quality and crop data. Nine AOTX indexes (AOT0, AOT5, AOT10, AOT15, AOT20, AOT25, AOT30, AOT40, and AOT50) were analyzed, crop responses tested and reduction in crops predicted. The results showed that the AOT50 resulted in the highest reduction in crops and the highest R2 value between the AOT50 and the crops reduction from the linear regression analysis. Hence, this study suggests that the AOT50 index is the most suitable index to estimate the potential ozone impact on crops in tropical regions. The result showed that the critical level for AOT50 index if the estimated crop reduction is 5% was 1336 ppb h. Additionally, the results indicated that the AOT40 index in Malaysia gave a minimum percentage of 6% crop reduction; as contrasted with the European guideline of 5% (due to differences in the climate e.g., average amount of sunshine).

[The public perception of information about the potential risks of genetically modified crops in the food chain].

PubMed

Furnival, Ariadne Chloë; Pinheiro, Sônia Maria

2008-01-01

At a time when genetically modified (GM) crops are entering the Brazilian food chain, we present the findings of a study that makes use of a qualitative technique involving focal groups to look into the public's interpretation of the information available about this biotechnological innovation. This methodology produced results that revealed the interconnections drawn by the research subjects between this form of biotechnology, changes to the environment, and food production in general. The mistrust expressed about GM crops was particularly attributed by the participants to the non-availability of comprehensible information in the mass media or on product labels.

GM foods and the misperception of risk perception.

PubMed

Gaskell, George; Allum, Nick; Wagner, Wolfgang; Kronberger, Nicole; Torgersen, Helge; Hampel, Juergen; Bardes, Julie

2004-02-01

Public opposition to genetically modified (GM) food and crops is widely interpreted as the result of the public's misperception of the risks. With scientific assessment pointing to no unique risks from GM crops and foods, a strategy of accurate risk communication from trusted sources has been advocated. This is based on the assumption that the benefits of GM crops and foods are self-evident. Informed by the interpretation of some qualitative interviews with lay people, we use data from the Eurobarometer survey on biotechnology to explore the hypothesis that it is not so much the perception of risks as the absence of benefits that is the basis of the widespread rejection of GM foods and crops by the European public. Some respondents perceive both risks and benefits, and may be trading off these attributes along the lines of a rational choice model. However, for others, one attribute-benefit-appears to dominate their judgments: the lexicographic heuristic. For these respondents, their perception of risk is of limited importance in the formation of attitudes toward GM food and crops. The implication is that the absence of perceived benefits from GM foods and crops calls into question the relevance of risk communication strategies for bringing about change in public opinion.

Assessing genetically modified crops to minimize the risk of increased food allergy: a review.

PubMed

Goodman, Richard E; Hefle, Susan L; Taylor, Steven L; van Ree, Ronald

2005-06-01

The first genetically modified (GM) crops approved for food use (tomato and soybean) were evaluated for safety by the United States Food and Drug Administration prior to commercial production. Among other factors, those products and all additional GM crops that have been grown commercially have been evaluated for potential increases in allergenic properties using methods that are consistent with the current understanding of food allergens and knowledge regarding the prediction of allergenic activity. Although there have been refinements, the key aspects of the evaluation have not changed. The allergenic properties of the gene donor and the host (recipient) organisms are considered in determining the appropriate testing strategy. The amino acid sequence of the encoded protein is compared to all known allergens to determine whether the protein is a known allergen or is sufficiently similar to any known allergen to indicate an increased probability of allergic cross-reactivity. Stability of the protein in the presence of acid with the stomach protease pepsin is tested as a risk factor for food allergenicity. In vitro or in vivo human IgE binding are tested when appropriate, if the gene donor is an allergen or the sequence of the protein is similar to an allergen. Serum donors and skin test subjects are selected based on their proven allergic responses to the gene donor or to material containing the allergen that was matched in sequence. While some scientists and regulators have suggested using animal models, performing broadly targeted serum IgE testing or extensive pre- or post-market clinical tests, current evidence does not support these tests as being predictive or practical. Based on the evidence to date, the current assessment process has worked well to prevent the unintended introduction of allergens in commercial GM crops.

Adaptation of the ToxRTool to Assess the Reliability of Toxicology Studies Conducted with Genetically Modified Crops and Implications for Future Safety Testing.

PubMed

Koch, Michael S; DeSesso, John M; Williams, Amy Lavin; Michalek, Suzanne; Hammond, Bruce

2016-01-01

To determine the reliability of food safety studies carried out in rodents with genetically modified (GM) crops, a Food Safety Study Reliability Tool (FSSRTool) was adapted from the European Centre for the Validation of Alternative Methods' (ECVAM) ToxRTool. Reliability was defined as the inherent quality of the study with regard to use of standardized testing methodology, full documentation of experimental procedures and results, and the plausibility of the findings. Codex guidelines for GM crop safety evaluations indicate toxicology studies are not needed when comparability of the GM crop to its conventional counterpart has been demonstrated. This guidance notwithstanding, animal feeding studies have routinely been conducted with GM crops, but their conclusions on safety are not always consistent. To accurately evaluate potential risks from GM crops, risk assessors need clearly interpretable results from reliable studies. The development of the FSSRTool, which provides the user with a means of assessing the reliability of a toxicology study to inform risk assessment, is discussed. Its application to the body of literature on GM crop food safety studies demonstrates that reliable studies report no toxicologically relevant differences between rodents fed GM crops or their non-GM comparators.

Spatialized Application of Remotely Sensed Data Assimilation Methods for Farmland Drought Monitoring Using Two Different Crop Models

NASA Astrophysics Data System (ADS)

Silvestro, Paolo Cosmo; Casa, Raffaele; Pignatti, Stefano; Castaldi, Fabio; Yang, Hao; Guijun, Yang

2016-08-01

The aim of this work was to develop a tool to evaluate the effect of water stress on yield losses at the farmland and regional scale, by assimilating remotely sensed biophysical variables into crop growth models. Biophysical variables were retrieved from HJ1A, HJ1B and Landsat 8 images, using an algorithm based on the training of artificial neural networks on PROSAIL.For the assimilation, two crop models of differing degree of complexity were used: Aquacrop and SAFY. For Aquacrop, an optimization procedure to reduce the difference between the remotely sensed and simulated CC was developed. For the modified version of SAFY, the assimilation procedure was based on the Ensemble Kalman Filter.These procedures were tested in a spatialized application, by using data collected in the rural area of Yangling (Shaanxi Province) between 2013 and 2015Results were validated by utilizing yield data both from ground measurements and statistical survey.

Genetically Modified Herbicide-Tolerant Crops, Weeds, and Herbicides: Overview and Impact.

PubMed

Bonny, Sylvie

2016-01-01

Genetically modified (GM) crops have been and continue to be a subject of controversy despite their rapid adoption by farmers where approved. For the last two decades, an important matter of debate has been their impact on pesticide use, particularly for herbicide-tolerant (HT) crops. Some claim that these crops bring about a decrease in herbicide use, while others claim the opposite. In fact, since 1996, most cultivated GMOs have been GMHT crops, which involve the use of an associated herbicide, generally glyphosate. In their very first years of adoption, HT crops often led to some decrease in herbicide use. However, the repetition of glyphosate-tolerant crops and of glyphosate only applications in the same fields without sufficient alternation and herbicide diversity has contributed to the appearance of glyphosate-resistant weeds. These weeds have resulted in a rise in the use of glyphosate and other herbicides. This article explores this situation and the impacts of herbicide-resistant weeds, using an interdisciplinary approach and drawing on recent data. The paper analyzes the spread of GMHT crops worldwide and their consequences on herbicide use in the USA in particular. It then addresses the global development of glyphosate-resistant weeds and their impact, particularly focusing on the USA. Finally, the last section explores how industry, farmers, and weed scientists are coping with the spread of resistant weeds. The concluding comments deal more widely with trends in GM crops.

Attitudes of Agricultural Experts Toward Genetically Modified Crops: A Case Study in Southwest Iran.

PubMed

Ghanian, Mansour; Ghoochani, Omid M; Kitterlin, Miranda; Jahangiry, Sheida; Zarafshani, Kiumars; Van Passel, Steven; Azadi, Hossein

2016-04-01

The production of genetically modified (GM) crops is growing around the world, and with it possible opportunities to combat food insecurity and hunger, as well as solutions to current problems facing conventional agriculture. In this regard the use of GMOs in food and agricultural applications has increased greatly over the past decade. However, the development of GM crops has been a matter of considerable interest and worldwide public controversy. This, in addition to skepticism, has stifled the use of this practice on a large scale in many areas, including Iran. It stands to reason that a greater understanding of this practice could be formed after a review of the existing expert opinions surrounding GM crops. Therefore, the purpose of this study was to analyze the predictors that influence agricultural experts' attitudes toward the development of and policies related to GM crops. Using a descriptive correlational research method, questionnaire data was collected from 65 experts from the Agricultural Organization in the Gotvand district in Southwest Iran. Results indicated that agricultural experts were aware of the environmental benefits and possible risks associated with GM crops. The majority of participants agreed that GM crops could improve food security and accelerate rural development, and were proponents of labeling practices for GM crops. Finally, there was a positive correlation between the perception of benefits and attitudes towards GM crops.

Genetically Modified Herbicide-Tolerant Crops, Weeds, and Herbicides: Overview and Impact

NASA Astrophysics Data System (ADS)

Bonny, Sylvie

2016-01-01

Genetically modified (GM) crops have been and continue to be a subject of controversy despite their rapid adoption by farmers where approved. For the last two decades, an important matter of debate has been their impact on pesticide use, particularly for herbicide-tolerant (HT) crops. Some claim that these crops bring about a decrease in herbicide use, while others claim the opposite. In fact, since 1996, most cultivated GMOs have been GMHT crops, which involve the use of an associated herbicide, generally glyphosate. In their very first years of adoption, HT crops often led to some decrease in herbicide use. However, the repetition of glyphosate-tolerant crops and of glyphosate only applications in the same fields without sufficient alternation and herbicide diversity has contributed to the appearance of glyphosate-resistant weeds. These weeds have resulted in a rise in the use of glyphosate and other herbicides. This article explores this situation and the impacts of herbicide-resistant weeds, using an interdisciplinary approach and drawing on recent data. The paper analyzes the spread of GMHT crops worldwide and their consequences on herbicide use in the USA in particular. It then addresses the global development of glyphosate-resistant weeds and their impact, particularly focusing on the USA. Finally, the last section explores how industry, farmers, and weed scientists are coping with the spread of resistant weeds. The concluding comments deal more widely with trends in GM crops.

Farmers prevailing perception profiles regarding GM crops: A classification proposal.

PubMed

Almeida, Carla; Massarani, Luisa

2018-04-01

Genetically modified organisms have been at the centre of a major public controversy, involving different interests and actors. While much attention has been devoted to consumer views on genetically modified food, there have been few attempts to understand the perceptions of genetically modified technology among farmers. By investigating perceptions of genetically modified organisms among Brazilian farmers, we intend to contribute towards filling this gap and thereby add the views of this stakeholder group to the genetically modified debate. A comparative analysis of our data and data from other studies indicate there is a complex variety of views on genetically modified organisms among farmers. Despite this diversity, we found variations in such views occur within limited parameters, concerned principally with expectations or concrete experiences regarding the advantages of genetically modified crops, perceptions of risks associated with them, and ethical questions they raise. We then propose a classification of prevailing profiles to represent the spectrum of perceptions of genetically modified organisms among farmers.

Use of genetically modified crops and pesticides in Brazil: growing hazards.

PubMed

Almeida, Vicente Eduardo Soares de; Friedrich, Karen; Tygel, Alan Freihof; Melgarejo, Leonardo; Carneiro, Fernando Ferreira

2017-10-01

Genetically modified (GM) crops were officially authorized in Brazil in 2003. In this documentary study, we aimed to identify possible changes in the patterns of pesticide use after the adoption of this technology over a span of 13 years (2000 to 2012). The following variables were analyzed: Pesticide use (kg), Pesticide use per capita (kg/inhab), Pesticide and herbicide use per area (kg/ha) and productivity (kg/ha). Contrary to the initial expectations of decreasing pesticide use following the adoption of GM crops, overall pesticide use in Brazil increased 1.6-fold between the years 2000 and 2012. During the same period, pesticide use for soybean increased 3-fold. This study shows that the adoption of GM crops in Brazil has led to an increase in pesticide use with possible increases in environmental and human exposure and associated negative impacts.

Quantifying the effect of crop spatial arrangement on weed suppression using functional-structural plant modelling.

PubMed

Evers, Jochem B; Bastiaans, Lammert

2016-05-01

Suppression of weed growth in a crop canopy can be enhanced by improving crop competitiveness. One way to achieve this is by modifying the crop planting pattern. In this study, we addressed the question to what extent a uniform planting pattern increases the ability of a crop to compete with weed plants for light compared to a random and a row planting pattern, and how this ability relates to crop and weed plant density as well as the relative time of emergence of the weed. To this end, we adopted the functional-structural plant modelling approach which allowed us to explicitly include the 3D spatial configuration of the crop-weed canopy and to simulate intra- and interspecific competition between individual plants for light. Based on results of simulated leaf area development, canopy photosynthesis and biomass growth of the crop, we conclude that differences between planting pattern were small, particularly if compared to the effects of relative time of emergence of the weed, weed density and crop density. Nevertheless, analysis of simulated weed biomass demonstrated that a uniform planting of the crop improved the weed-suppression ability of the crop canopy. Differences in weed suppressiveness between planting patterns were largest with weed emergence before crop emergence, when the suppressive effect of the crop was only marginal. With simultaneous emergence a uniform planting pattern was 8 and 15 % more competitive than a row and a random planting pattern, respectively. When weed emergence occurred after crop emergence, differences between crop planting patterns further decreased as crop canopy closure was reached early on regardless of planting pattern. We furthermore conclude that our modelling approach provides promising avenues to further explore crop-weed interactions and aid in the design of crop management strategies that aim at improving crop competitiveness with weeds.

Ingestion of genetically modified yeast symbiont reduces fitness of an insect pest via RNA interference

PubMed Central

Murphy, Katherine A.; Tabuloc, Christine A.; Cervantes, Kevin R.; Chiu, Joanna C.

2016-01-01

RNA interference has had major advances as a developing tool for pest management. In laboratory experiments, double-stranded RNA (dsRNA) is often administered to the insect by genetic modification of the crop, or synthesized in vitro and topically applied to the crop. Here, we engineered genetically modified yeast that express dsRNA targeting y-Tubulin in Drosophila suzukii. Our design takes advantage of the symbiotic interactions between Drosophila, yeast, and fruit crops. Yeast is naturally found growing on the surface of fruit crops, constitutes a major component of the Drosophila microbiome, and is highly attractive to Drosophila. Thus, this naturally attractive yeast biopesticide can deliver dsRNA to an insect pest without the need for genetic crop modification. We demonstrate that this biopesticide decreases larval survivorship, and reduces locomotor activity and reproductive fitness in adults, which are indicative of general health decline. To our knowledge, this is the first study to show that yeast can be used to deliver dsRNA to an insect pest. PMID:26931800

The impact of genetically modified crops on soil microbial communities.

PubMed

Giovannetti, Manuela; Sbrana, Cristiana; Turrini, Alessandra

2005-01-01

Genetically modified (GM) plants represent a potential benefit for environmentally friendly agriculture and human health. Though, poor knowledge is available on potential hazards posed by unintended modifications occurring during genetic manipulation. The increasing amount of reports on ecological risks and benefits of GM plants stresses the need for experimental works aimed at evaluating the impact of GM crops on natural and agro-ecosystems. Major environmental risks associated with GM crops include their potential impact on non-target soil microorganisms playing a fundamental role in crop residues degradation and in biogeochemical cycles. Recent works assessed the effects of GM crops on soil microbial communities on the basis of case-by-case studies, using multimodal experimental approaches involving different target and non-target organisms. Experimental evidences discussed in this review confirm that a precautionary approach should be adopted, by taking into account the risks associated with the unpredictability of transformation events, of their pleiotropic effects and of the fate of transgenes in natural and agro-ecosystems, weighing benefits against costs.

Insect-resistant biotech crops and their impacts on beneficial arthropods

PubMed Central

Gatehouse, A. M. R.; Ferry, N.; Edwards, M. G.; Bell, H. A.

2011-01-01

With a projected population of 10 billion by 2050, an immediate priority for agriculture is to achieve increased crop yields in a sustainable and cost-effective way. The concept of using a transgenic approach was realized in the mid-1990s with the commercial introduction of genetically modified (GM) crops. By 2010, the global value of the seed alone was US $11.2 billion, with commercial biotech maize, soya bean grain and cotton valued at approximately US $150 billion. In recent years, it has become evident that insect-resistant crops expressing δ-endotoxin genes from Bacillus thuringiensis have made a significant beneficial impact on global agriculture, not least in terms of pest reduction and improved quality. However, because of the potential for pest populations to evolve resistance, and owing to lack of effective control of homopteran pests, alternative strategies are being developed. Some of these are based on Bacillus spp. or other insect pathogens, while others are based on the use of plant- and animal-derived genes. However, if such approaches are to play a useful role in crop protection, it is desirable that they do not have a negative impact on beneficial organisms at higher trophic levels thus affecting the functioning of the agro-ecosystem. This widely held concern over the ecological impacts of GM crops has led to the extensive examination of the potential effects of a range of transgene proteins on non-target and beneficial insects. The findings to date with respect to both commercial and experimental GM crops expressing anti-insect genes are discussed here, with particular emphasis on insect predators and parasitoids. PMID:21444317

Insect-resistant biotech crops and their impacts on beneficial arthropods.

PubMed

Gatehouse, A M R; Ferry, N; Edwards, M G; Bell, H A

2011-05-12

With a projected population of 10 billion by 2050, an immediate priority for agriculture is to achieve increased crop yields in a sustainable and cost-effective way. The concept of using a transgenic approach was realized in the mid-1990s with the commercial introduction of genetically modified (GM) crops. By 2010, the global value of the seed alone was US $11.2 billion, with commercial biotech maize, soya bean grain and cotton valued at approximately US $150 billion. In recent years, it has become evident that insect-resistant crops expressing δ-endotoxin genes from Bacillus thuringiensis have made a significant beneficial impact on global agriculture, not least in terms of pest reduction and improved quality. However, because of the potential for pest populations to evolve resistance, and owing to lack of effective control of homopteran pests, alternative strategies are being developed. Some of these are based on Bacillus spp. or other insect pathogens, while others are based on the use of plant- and animal-derived genes. However, if such approaches are to play a useful role in crop protection, it is desirable that they do not have a negative impact on beneficial organisms at higher trophic levels thus affecting the functioning of the agro-ecosystem. This widely held concern over the ecological impacts of GM crops has led to the extensive examination of the potential effects of a range of transgene proteins on non-target and beneficial insects. The findings to date with respect to both commercial and experimental GM crops expressing anti-insect genes are discussed here, with particular emphasis on insect predators and parasitoids.

GM crops and the rat digestive tract: a critical review.

PubMed

Zdziarski, I M; Edwards, J W; Carman, J A; Haynes, J I

2014-12-01

The aim of this review is to examine the relationship between genetically modified (GM) crops and health, based on histopathological investigations of the digestive tract in rats. We reviewed published long-term feeding studies of crops containing one or more of three specific traits: herbicide tolerance via the EPSPS gene and insect resistance via cry1Ab or cry3Bb1 genes. These genes are commonly found in commercialised GM crops. Our search found 21 studies for nine (19%) out of the 47 crops approved for human and/or animal consumption. We could find no studies on the other 38 (81%) approved crops. Fourteen out of the 21 studies (67%) were general health assessments of the GM crop on rat health. Most of these studies (76%) were performed after the crop had been approved for human and/or animal consumption, with half of these being published at least nine years after approval. Our review also discovered an inconsistency in methodology and a lack of defined criteria for outcomes that would be considered toxicologically or pathologically significant. In addition, there was a lack of transparency in the methods and results, which made comparisons between the studies difficult. The evidence reviewed here demonstrates an incomplete picture regarding the toxicity (and safety) of GM products consumed by humans and animals. Therefore, each GM product should be assessed on merit, with appropriate studies performed to indicate the level of safety associated with them. Detailed guidelines should be developed which will allow for the generation of comparable and reproducible studies. This will establish a foundation for evidence-based guidelines, to better determine if GM food is safe for human and animal consumption. Copyright © 2014. Published by Elsevier Ltd.

The Value of SMAP Soil Moisture Observations For Agricultural Applications

NASA Astrophysics Data System (ADS)

Mladenova, I. E.; Bolten, J. D.; Crow, W.; Reynolds, C. A.

2017-12-01

Knowledge of the amount of soil moisture (SM) in the root zone (RZ) is critical source of information for crop analysts and agricultural agencies as it controls crop development and crop condition changes and can largely impact end-of-season yield. Foreign Agricultural Services (FAS), a subdivision of U.S. Department of Agriculture (USDA) that is in charge with providing information on current and expected global crop supply and demand estimates, has been relying on RZSM estimates generated by the modified two-layer Palmer model, which has been enhanced to allow the assimilation of satellite-based soil moisture data. Generally the accuracy of model-based soil moisture estimates is dependent on the precision of the forcing data that drives the model and more specifically, the accuracy of the precipitation data. Data assimilation gives the opportunity to correct for such precipitation-related inaccuracies and enhance the quality of the model estimates. Here we demonstrate the value of ingesting passive-based soil moisture observations derived from the Soil Moisture Active Passive (SMAP) mission. In terms of agriculture, general understanding is that the change in soil moisture conditions precede the change in vegetation status, suggesting that soil moisture can be used as an early indicator of expected crop conditions. Therefore, we assess the accuracy of the SMAP enhanced Palmer model by examining the lag rank cross-correlation coefficient between the model generated soil moisture observations and the Normalized Difference Vegetation Index (NDVI).

Herbicide resistance and biodiversity: agronomic and environmental aspects of genetically modified herbicide-resistant plants.

PubMed

Schütte, Gesine; Eckerstorfer, Michael; Rastelli, Valentina; Reichenbecher, Wolfram; Restrepo-Vassalli, Sara; Ruohonen-Lehto, Marja; Saucy, Anne-Gabrielle Wuest; Mertens, Martha

2017-01-01

Farmland biodiversity is an important characteristic when assessing sustainability of agricultural practices and is of major international concern. Scientific data indicate that agricultural intensification and pesticide use are among the main drivers of biodiversity loss. The analysed data and experiences do not support statements that herbicide-resistant crops provide consistently better yields than conventional crops or reduce herbicide amounts. They rather show that the adoption of herbicide-resistant crops impacts agronomy, agricultural practice, and weed management and contributes to biodiversity loss in several ways: (i) many studies show that glyphosate-based herbicides, which were commonly regarded as less harmful, are toxic to a range of aquatic organisms and adversely affect the soil and intestinal microflora and plant disease resistance; the increased use of 2,4-D or dicamba, linked to new herbicide-resistant crops, causes special concerns. (ii) The adoption of herbicide-resistant crops has reduced crop rotation and favoured weed management that is solely based on the use of herbicides. (iii) Continuous herbicide resistance cropping and the intensive use of glyphosate over the last 20 years have led to the appearance of at least 34 glyphosate-resistant weed species worldwide. Although recommended for many years, farmers did not counter resistance development in weeds by integrated weed management, but continued to rely on herbicides as sole measure. Despite occurrence of widespread resistance in weeds to other herbicides, industry rather develops transgenic crops with additional herbicide resistance genes. (iv) Agricultural management based on broad-spectrum herbicides as in herbicide-resistant crops further decreases diversity and abundance of wild plants and impacts arthropod fauna and other farmland animals. Taken together, adverse impacts of herbicide-resistant crops on biodiversity, when widely adopted, should be expected and are indeed very hard to avoid. For that reason, and in order to comply with international agreements to protect and enhance biodiversity, agriculture needs to focus on practices that are more environmentally friendly, including an overall reduction in pesticide use. (Pesticides are used for agricultural as well non-agricultural purposes. Most commonly they are used as plant protection products and regarded as a synonym for it and so also in this text.).

Critique and sensitivity analysis of the compensation function used in the LMS Hudson River striped bass models. Environmental Sciences Division publication No. 944

DOE Office of Scientific and Technical Information (OSTI.GOV)

Van Winkle, W.; Christensen, S.W.; Kauffman, G.

1976-12-01

The description and justification for the compensation function developed and used by Lawler, Matusky and Skelly Engineers (LMS) (under contract to Consolidated Edison Company of New York) in their Hudson River striped bass models are presented. A sensitivity analysis of this compensation function is reported, based on computer runs with a modified version of the LMS completely mixed (spatially homogeneous) model. Two types of sensitivity analysis were performed: a parametric study involving at least five levels for each of the three parameters in the compensation function, and a study of the form of the compensation function itself, involving comparison ofmore » the LMS function with functions having no compensation at standing crops either less than or greater than the equilibrium standing crops. For the range of parameter values used in this study, estimates of percent reduction are least sensitive to changes in YS, the equilibrium standing crop, and most sensitive to changes in KXO, the minimum mortality rate coefficient. Eliminating compensation at standing crops either less than or greater than the equilibrium standing crops results in higher estimates of percent reduction. For all values of KXO and for values of YS and KX at and above the baseline values, eliminating compensation at standing crops less than the equilibrium standing crops results in a greater increase in percent reduction than eliminating compensation at standing crops greater than the equilibrium standing crops.« less

Status of market, regulation and research of genetically modified crops in Chile.

PubMed

Sánchez, Miguel A; León, Gabriel

2016-12-25

Agricultural biotechnology and genetically modified (GM) crops are effective tools to substantially increase productivity, quality, and environmental sustainability in agricultural farming. Furthermore, they may contribute to improving the nutritional content of crops, addressing needs related to public health. Chile has become one of the most important global players for GM seed production for counter-season markets and research purposes. It has a comprehensive regulatory framework to carry out this activity, while at the same time there are numerous regulations from different agencies addressing several aspects related to GM crops. Despite imports of GM food/feed or ingredients for the food industry being allowed without restrictions, Chilean farmers are not using GM seeds for farming purposes because of a lack of clear guidelines. Chile is in a rather contradictory situation about GM crops. The country has invested considerable resources to fund research and development on GM crops, but the lack of clarity in the current regulatory situation precludes the use of such research to develop new products for Chilean farmers. Meanwhile, a larger scientific capacity regarding GM crop research continues to build up in the country. The present study maps and analyses the current regulatory environment for research and production of GM crops in Chile, providing an updated overview of the current status of GM seeds production, research and regulatory issues. Copyright © 2016 Elsevier B.V. All rights reserved.

13C NMR and XPS characterization of anion adsorbent with quaternary ammonium groups prepared from rice straw, corn stalk and sugarcane bagasse

NASA Astrophysics Data System (ADS)

Cao, Wei; Wang, Zhenqian; Zeng, Qingling; Shen, Chunhua

2016-12-01

Despite amino groups modified crop straw has been intensively studied as new and low-cost adsorbent for removal of anionic species from water, there is still a lack of clear characterization for amino groups, especially quaternary ammonium groups in the surface of crop straw. In this study, we used 13C NMR and XPS technologies to characterize adsorbents with quaternary ammonium groups prepared from rice straw, corn stalk and sugarcane bagasse. 13C NMR spectra clearly showed the presence of quaternary ammonium groups in lignocelluloses structure of modified crop straw. The increase of nitrogen observed in XPS survey spectra also indicated the existence of quaternary ammonium group in the surface of the adsorbents. The curve fitting of high-resolution XPS N1s and C1s spectra were conducted to probe the composition of nitrogen and carbon contained groups, respectively. The results showed the proportion of quaternary ammonium group significantly increased in the prepared adsorbent's surface that was dominated by methyl/methylene, hydroxyl, quaternary ammonium, ether and carbonyl groups. This study proved that 13C NMR and XPS could be successfully utilized for characterization of quaternary ammonium modified crop straw adsorbents.

Global emissions of PM10 and PM2.5 from agricultural tillage and harvesting operations

NASA Astrophysics Data System (ADS)

Chen, W.; Tong, D.; Lee, P.

2014-12-01

Soil particles emitted during agricultural activities is a major recurring source contributing to atmospheric aerosol loading. Emission inventories of agricultural dust emissions have been compiled in several regions. These inventories, compiled based on historic survey and activity data, may reflect the current emission strengths that introduce large uncertainties when they are used to drive chemical transport models. In addition, there is no global emission inventory of agricultural dust emissions required to support global air quality and climate modeling. In this study, we present our recent efforts to develop a global emission inventory of PM10 and PM2.5 released from field tillage and harvesting operations using an emission factors-based approach. Both major crops (e.g., wheat and corn) and forage production were considered. For each crop or forage, information of crop area, crop calendar, farming activities and emission factors of specified operations were assembled. The key issue of inventory compilation is the choice of suitable emission factors for specified operations over different parts of the world. Through careful review of published emission factors, we modified the traditional emission factor-based model by multiplying correction coefficient factors to reflect the relationship between emission factors, soil texture, and climate conditions. Then, the temporal (i.e., monthly) and spatial (i.e., 0.5º resolution) distribution of agricultural PM10 and PM2.5 emissions from each and all operations were estimated for each crop or forage. Finally, the emissions from individual crops were aggregated to assemble a global inventory from agricultural operations. The inventory was verified by comparing the new data with the existing agricultural fugitive dust inventory in North America and Europe, as well as satellite observations of anthropogenic agricultural dust emissions.

Spatio-temporal monitoring of cotton cultivation using ground-based and airborne multispectral sensors in GIS environment.

PubMed

Papadopoulos, Antonis; Kalivas, Dionissios; Theocharopoulos, Sid

2017-07-01

Multispectral sensor capability of capturing reflectance data at several spectral channels, together with the inherent reflectance responses of various soils and especially plant surfaces, has gained major interest in crop production. In present study, two multispectral sensing systems, a ground-based and an aerial-based, were applied for the multispatial and temporal monitoring of two cotton fields in central Greece. The ground-based system was Crop Circle ACS-430, while the aerial consisted of a consumer-level quadcopter (Phantom 2) and a modified Hero3+ Black digital camera. The purpose of the research was to monitor crop growth with the two systems and investigate possible interrelations between the derived well-known normalized difference vegetation index (NDVI). Five data collection campaigns were conducted during the cultivation period and concerned scanning soil and plants with the ground-based sensor and taking aerial photographs of the fields with the unmanned aerial system. According to the results, both systems successfully monitored cotton growth stages in terms of space and time. The mean values of NDVI changes through time as retrieved by the ground-based system were satisfactorily modelled by a second-order polynomial equation (R 2 0.96 in Field 1 and 0.99 in Field 2). Further, they were highly correlated (r 0.90 in Field 1 and 0.74 in Field 2) with the according values calculated via the aerial-based system. The unmanned aerial system (UAS) can potentially substitute crop scouting as it concerns a time-effective, non-destructive and reliable way of soil and plant monitoring.

Relation between Ocean SST Dipoles and Downwind Continental Croplands Assessed for Early Management Using Satellite-based Photosynthesis Models

NASA Astrophysics Data System (ADS)

Kaneko, Daijiro

2015-04-01

Crop-monitoring systems with the unit of carbon-dioxide sequestration for environmental issues related to climate adaptation to global warming have been improved using satellite-based photosynthesis and meteorological conditions. Early management of crop status is desirable for grain production, stockbreeding, and bio-energy providing that the seasonal climate forecasting is sufficiently accurate. Incorrect seasonal forecasting of crop production can damage global social activities if the recognized conditions are unsatisfied. One cause of poor forecasting related to the atmospheric dynamics at the Earth surface, which reflect the energy budget through land surface, especially the oceans and atmosphere. Recognition of the relation between SST anomalies (e.g. ENSO, Atlantic Niño, Indian dipoles, and Ningaloo Niño) and crop production, as expressed precisely by photosynthesis or the sequestrated-carbon rate, is necessary to elucidate the mechanisms related to poor production. Solar radiation, surface air temperature, and water stress all directly affect grain vegetation photosynthesis. All affect stomata opening, which is related to the water balance or definition by the ratio of the Penman potential evaporation and actual transpiration. Regarding stomata, present data and reanalysis data give overestimated values of stomata opening because they are extended from wet models in forests rather than semi-arid regions commonly associated with wheat, maize, and soybean. This study applies a complementary model based on energy conservation for semi-arid zones instead of the conventional Penman-Monteith method. Partitioning of the integrated Net PSN enables precise estimation of crop yields by modifying the semi-closed stomata opening. Partitioning predicts production more accurately using the cropland distribution already classified using satellite data. Seasonal crop forecasting should include near-real-time monitoring using satellite-based process crop models to avoid social difficulties that can derive from uncertain seasonal predictions produced from long-term forecasting. Acknowledgement The author appreciates scientific discussions held with the application team of seasonal prediction at the Japan Agency for Marine-Earth Science and Technology. Key words: crop production, monitoring, forecasting, SST anomaly, remote sensing

Locus-dependent selection in crop-wild hybrids of lettuce under field conditions and its implication for GM crop development

PubMed Central

Hooftman, Danny A P; Flavell, Andrew J; Jansen, Hans; den Nijs, Hans C M; Syed, Naeem H; Sørensen, Anker P; Orozco-ter Wengel, Pablo; van de Wiel, Clemens C M

2011-01-01

Gene escape from crops has gained much attention in the last two decades, as transgenes introgressing into wild populations could affect the latter's ecological characteristics. However, different genes have different likelihoods of introgression. The mixture of selective forces provided by natural conditions creates an adaptive mosaic of alleles from both parental species. We investigated segregation patterns after hybridization between lettuce (Lactuca sativa) and its wild relative, L. serriola. Three generations of hybrids (S1, BC1, and BC1S1) were grown in habitats mimicking the wild parent's habitat. As control, we harvested S1 seedlings grown under controlled conditions, providing very limited possibility for selection. We used 89 AFLP loci, as well as more recently developed dominant markers, 115 retrotransposon markers (SSAP), and 28 NBS loci linked to resistance genes. For many loci, allele frequencies were biased in plants exposed to natural field conditions, including over-representation of crop alleles for various loci. Furthermore, Linkage disequilibrium was locally changed, allegedly by selection caused by the natural field conditions, providing ample opportunity for genetic hitchhiking. Our study indicates that when developing genetically modified crops, a judicious selection of insertion sites, based on knowledge of selective (dis)advantages of the surrounding crop genome under field conditions, could diminish transgene persistence. PMID:25568012

Locus-dependent selection in crop-wild hybrids of lettuce under field conditions and its implication for GM crop development.

PubMed

Hooftman, Danny A P; Flavell, Andrew J; Jansen, Hans; den Nijs, Hans C M; Syed, Naeem H; Sørensen, Anker P; Orozco-Ter Wengel, Pablo; van de Wiel, Clemens C M

2011-09-01

Gene escape from crops has gained much attention in the last two decades, as transgenes introgressing into wild populations could affect the latter's ecological characteristics. However, different genes have different likelihoods of introgression. The mixture of selective forces provided by natural conditions creates an adaptive mosaic of alleles from both parental species. We investigated segregation patterns after hybridization between lettuce (Lactuca sativa) and its wild relative, L. serriola. Three generations of hybrids (S1, BC1, and BC1S1) were grown in habitats mimicking the wild parent's habitat. As control, we harvested S1 seedlings grown under controlled conditions, providing very limited possibility for selection. We used 89 AFLP loci, as well as more recently developed dominant markers, 115 retrotransposon markers (SSAP), and 28 NBS loci linked to resistance genes. For many loci, allele frequencies were biased in plants exposed to natural field conditions, including over-representation of crop alleles for various loci. Furthermore, Linkage disequilibrium was locally changed, allegedly by selection caused by the natural field conditions, providing ample opportunity for genetic hitchhiking. Our study indicates that when developing genetically modified crops, a judicious selection of insertion sites, based on knowledge of selective (dis)advantages of the surrounding crop genome under field conditions, could diminish transgene persistence.

European Union's Moratorium Impact on Food Biotechnology: A Discussion-Based Scenario

ERIC Educational Resources Information Center

Snyder, Lori Unruh; Gallo, Maria; Fulford, Stephen G.; Irani, Tracy; Rudd, Rick; DiFino, Sharon M.; Durham, Timothy C.

2008-01-01

Genetically modified (GM) crops such as maize (Zea mays L.), cotton (Gossypium hirsutum L.), soybean [Glycine max (L.) Moench], and canola (Brassica rapa L.) have been widely adopted by American farmers. In spite of their use in the United States, the European Union (EU) imposed a 6-year de facto moratorium (1998-2004) on the cultivation/import of…

Designing forest vegetation management strategies based on the mechanisms and dynamics of crop tree competition by neighbouring vegetation

Treesearch

P. Balandier; C. Collet; James H. Miller; P.E. Reynolds; S.M. Zedaker

2006-01-01

Plant interactions can be defined as the ways plants act upon the growth, fitness, survival and reproduction of other plants, largely by modifying their environment. These interactions can be positive (facilitation) or negative (competition or exploitation). During plantation establishment or natural forest regeneration after a disturbance, high light levels and,...

A modified mass selection scheme for creating winter-hardy faba bean (Vicia faba L.) lines with a broad genetic base

USDA-ARS?s Scientific Manuscript database

Winter-hardy faba bean (Vicia faba L.) from northern Europe is represented by a rather narrow gene pool. Limited selection gains for overwintering beyond a maximum of -25°C have restricted the adoption of this crop. Therefore, the faba bean collection maintained by the USDA-ARS National Plant Germpl...

[Genetically modified crops: promises and good intentions are not enough (refutation to Espinoza et aL 2004, Rev. Biol. Trop. 52 (3): 727-732)].

PubMed

García, Jaime E G

2007-06-01

The arguments presented by Espinoza et al. in their paper "Relationship of genetically modified crops with the environment and health of the Costa Rican human population" published in this journal (Rev. Biol. Trop. 52: 727-732, 2004) are questioned and refuted. The arguments are confronted with evidence offered by scientists and national and international independent organizations around the world (e.g. World Health Organization, Consumers International, Physicians and Scientists for Responsible Application of Science and Technology, International Union for Conservation of Nature and Natural Resources, the Council of the University of Costa Rica, and the Independent Science Panel) showing the current uncertainty and limitations of science in this area, as well as those of proposed and applied biosafety approaches. Environment, biodiversity and food security are so important and basic matters, that there is need of serious testing, particularly when promises seem to be based on environmentally dangerous ideas promoted half a century ago by the so called "green revolution". Debate should continue, based on a holistic analysis of facts and with ethical reasoning, avoiding emotional positions that can confuse virtual reality with reality.

Tendency for interlaboratory precision in the GMO analysis method based on real-time PCR.

PubMed

Kodama, Takashi; Kurosawa, Yasunori; Kitta, Kazumi; Naito, Shigehiro

2010-01-01

The Horwitz curve estimates interlaboratory precision as a function only of concentration, and is frequently used as a method performance criterion in food analysis with chemical methods. The quantitative biochemical methods based on real-time PCR require an analogous criterion to progressively promote method validation. We analyzed the tendency of precision using a simplex real-time PCR technique in 53 collaborative studies of seven genetically modified (GM) crops. Reproducibility standard deviation (SR) and repeatability standard deviation (Sr) of the genetically modified organism (GMO) amount (%) was more or less independent of GM crops (i.e., maize, soybean, cotton, oilseed rape, potato, sugar beet, and rice) and evaluation procedure steps. Some studies evaluated whole steps consisting of DNA extraction and PCR quantitation, whereas others focused only on the PCR quantitation step by using DNA extraction solutions. Therefore, SR and Sr for GMO amount (%) are functions only of concentration similar to the Horwitz curve. We proposed S(R) = 0.1971C 0.8685 and S(r) = 0.1478C 0.8424, where C is the GMO amount (%). We also proposed a method performance index in GMO quantitative methods that is analogous to the Horwitz Ratio.

Expert opinion vs. empirical evidence

PubMed Central

Herman, Rod A; Raybould, Alan

2014-01-01

Expert opinion is often sought by government regulatory agencies when there is insufficient empirical evidence to judge the safety implications of a course of action. However, it can be reckless to continue following expert opinion when a preponderance of evidence is amassed that conflicts with this opinion. Factual evidence should always trump opinion in prioritizing the information that is used to guide regulatory policy. Evidence-based medicine has seen a dramatic upturn in recent years spurred by examples where evidence indicated that certain treatments recommended by expert opinions increased death rates. We suggest that scientific evidence should also take priority over expert opinion in the regulation of genetically modified crops (GM). Examples of regulatory data requirements that are not justified based on the mass of evidence are described, and it is suggested that expertise in risk assessment should guide evidence-based regulation of GM crops. PMID:24637724

The present state of research and exploitation of biotech (GM) crops in horticulture: results of research on plum cv. 'HoneySweet' resistant to plum pox virus (Sharka) and the deregulation of this cultivar in the CR & Europe

USDA-ARS?s Scientific Manuscript database

Gentically modified (GM) crops were grown world-wide on 160 million ha in 2011. Only 114.57 ha of GM crops were grown in Europe, of that, 114.90 ha were Bt maize and 17 ha were potato for industrial starch production. Commercialization of Biotech crops started in 1995. Currently, developing count...

Derivation and interpretation of hazard quotients to assess ecological risks from the cultivation of insect-resistant transgenic crops.

PubMed

Raybould, Alan; Caron-Lormier, Geoffrey; Bohan, David A

2011-06-08

Cost-effective and rigorous risk assessments for chemicals may be based on hazard quotients (HQs): the ratio of a measure of exposure to a substance and a measure of the effect of that substance. HQs have been used for many years in ecological risk assessments for the use of synthetic pesticides in agriculture, and methods for calculating pesticide HQs have been adapted for use with transgenic crops. This paper describes how laboratory methods for assessing the ecotoxicological effects of synthetic pesticides have been modified for the measurement of effects of insecticidal proteins, and how these effect measures are combined with exposure estimates to derive HQs for assessing the ecological risks from the cultivation of insect-resistant transgenic crops. The potential for ecological modeling to inform the design of laboratory effects tests for insecticidal proteins is also discussed.

Economic impact of GM crops

PubMed Central

Brookes, Graham; Barfoot, Peter

2014-01-01

A key part of any assessment of the global value of crop biotechnology in agriculture is an examination of its economic impact at the farm level. This paper follows earlier annual studies which examined economic impacts on yields, key costs of production, direct farm income and effects, and impacts on the production base of the four main crops of soybeans, corn, cotton and canola. The commercialization of genetically modified (GM) crops has continued to occur at a rapid rate, with important changes in both the overall level of adoption and impact occurring in 2012. This annual updated analysis shows that there have been very significant net economic benefits at the farm level amounting to $18.8 billion in 2012 and $116.6 billion for the 17-year period (in nominal terms). These economic gains have been divided roughly 50% each to farmers in developed and developing countries. GM technology have also made important contributions to increasing global production levels of the four main crops, having added 122 million tonnes and 230 million tonnes respectively, to the global production of soybeans and maize since the introduction of the technology in the mid-1990s. PMID:24637520

Economic impact of GM crops: the global income and production effects 1996-2012.

PubMed

Brookes, Graham; Barfoot, Peter

2014-01-01

A key part of any assessment of the global value of crop biotechnology in agriculture is an examination of its economic impact at the farm level. This paper follows earlier annual studies which examined economic impacts on yields, key costs of production, direct farm income and effects, and impacts on the production base of the four main crops of soybeans, corn, cotton and canola. The commercialization of genetically modified (GM) crops has continued to occur at a rapid rate, with important changes in both the overall level of adoption and impact occurring in 2012. This annual updated analysis shows that there have been very significant net economic benefits at the farm level amounting to $18.8 billion in 2012 and $116.6 billion for the 17-year period (in nominal terms). These economic gains have been divided roughly 50% each to farmers in developed and developing countries. GM technology have also made important contributions to increasing global production levels of the four main crops, having added 122 million tonnes and 230 million tonnes respectively, to the global production of soybeans and maize since the introduction of the technology in the mid-1990s.

Integrated pest management and weed management in the United States and Canada.

PubMed

Owen, Micheal D K; Beckie, Hugh J; Leeson, Julia Y; Norsworthy, Jason K; Steckel, Larry E

2015-03-01

There is interest in more diverse weed management tactics because of evolved herbicide resistance in important weeds in many US and Canadian crop systems. While herbicide resistance in weeds is not new, the issue has become critical because of the adoption of simple, convenient and inexpensive crop systems based on genetically engineered glyphosate-tolerant crop cultivars. Importantly, genetic engineering has not been a factor in rice and wheat, two globally important food crops. There are many tactics that help to mitigate herbicide resistance in weeds and should be widely adopted. Evolved herbicide resistance in key weeds has influenced a limited number of growers to include a more diverse suite of tactics to supplement existing herbicidal tactics. Most growers still emphasize herbicides, often to the exclusion of alternative tactics. Application of integrated pest management for weeds is better characterized as integrated weed management, and more typically integrated herbicide management. However, adoption of diverse weed management tactics is limited. Modifying herbicide use will not solve herbicide resistance in weeds, and the relief provided by different herbicide use practices is generally short-lived at best. More diversity of tactics for weed management must be incorporated in crop systems. © 2014 Society of Chemical Industry.

Relevance of Crop Biology for Environmental Risk Assessment of Genetically Modified Crops in Africa.

PubMed

Akinbo, Olalekan; Hancock, James F; Makinde, Diran

2015-01-01

Knowledge about the crop biology of economic crops in Africa is needed for regulators to accurately review dossiers and conduct comprehensive environmental risk assessments (ERAs). This information allows regulators to decide whether biotech crops present a risk to biodiversity, since crossing between domesticated crops and their wild relatives could affect the adaptations of the wild species. The criteria that should be used in the evaluation of African crops for ERA include growth habit, center of origin, center of genetic diversity, proximity of wild relatives, inter-fertility, mode of pollen dispersal, length of pollen viability, mating system, invasiveness, weediness, mode of propagation, mode of seed dispersal, and length of seed dormancy. In this paper, we discuss the crops being genetic engineered in Africa and describe the crop biology of those with native relatives.

Enhancing the USDA Global Crop Assessment Decision Support System Using SMAP Soil Moisture Data

NASA Astrophysics Data System (ADS)

Bolten, J. D.; Mladenova, I. E.; Crow, W. T.; Reynolds, C. A.

2016-12-01

The Foreign Agricultural Services (FAS) is a subdivision of U.S. Department of Agriculture (USDA) that is in charge with providing information on current and expected crop supply and demand estimates. Knowledge of the amount of water in the root zone is an essential source of information for the crop analysts as it governs the crop development and crop growth, which in turn determine the end-of-season yields. USDA FAS currently relies on root zone soil moisture (RZSM) estimates generated using the modified two-layer Palmer Model (PM). PM is a simple water-balance hydrologic model that is driven by daily precipitation observations and minimum and maximum temperature data. These forcing data are based on ground meteorological station measurements from the World Meteorological Organization (WMO), and gridded weather data from the former U.S. Air Force Weather Agency (AFWA), currently called U.S. Air Force 557th Weather Wing. The PM was extended by adding a data assimilation (DA) unit that provides the opportunity to routinely ingest satellite-based soil moisture observations. This allows us to adjust for precipitation-related inaccuracies and enhance the quality of the PM soil moisture estimates. The current operational DA system is based on a 1-D Ensample Kalman Filter approach and relies on observations obtained from the Soil Moisture Ocean Salinity Mission (SMOS). Our talk will demonstrate the value of assimilating two satellite products (i.e. a passive and active) and discuss work that is done in preparation for ingesting soil moisture observations from the Soil Moisture Active Passive (SMAP) mission.

Regional crop gross primary production and yield estimation using fused Landsat-MODIS data

NASA Astrophysics Data System (ADS)

He, M.; Kimball, J. S.; Maneta, M. P.; Maxwell, B. D.; Moreno, A.

2017-12-01

Accurate crop yield assessments using satellite-based remote sensing are of interest for the design of regional policies that promote agricultural resiliency and food security. However, the application of current vegetation productivity algorithms derived from global satellite observations are generally too coarse to capture cropland heterogeneity. Merging information from sensors with reciprocal spatial and temporal resolution can improve the accuracy of these retrievals. In this study, we estimate annual crop yields for seven important crop types -alfalfa, barley, corn, durum wheat, peas, spring wheat and winter wheat over Montana, United States (U.S.) from 2008 to 2015. Yields are estimated as the product of gross primary production (GPP) and a crop-specific harvest index (HI) at 30 m spatial resolution. To calculate GPP we used a modified form of the MOD17 LUE algorithm driven by a 30 m 8-day fused NDVI dataset constructed by blending Landsat (5 or 7) and MODIS Terra reflectance data. The fused 30-m NDVI record shows good consistency with the original Landsat and MODIS data, but provides better spatiotemporal information on cropland vegetation growth. The resulting GPP estimates capture characteristic cropland patterns and seasonal variations, while the estimated annual 30 m crop yield results correspond favorably with county-level crop yield data (r=0.96, p<0.05). The estimated crop yield performance was generally lower, but still favorable in relation to field-scale crop yield surveys (r=0.42, p<0.01). Our methods and results are suitable for operational applications at regional scales.

A global overview of biotech (GM) crops: adoption, impact and future prospects.

PubMed

James, Clive

2010-01-01

In the early 1990s, some were skeptical that genetically modified (GM) crops, now referred to as biotech crops, could deliver improved products and make an impact at the farm level. There was even more skepticism that developing countries would adopt biotech crops. The adoption of and commercialization of biotech crops in 2008 is reviewed. The impact of biotech crops are summarized including their contribution to: global food, feed and fiber security; a safer environment; a more sustainable agriculture; and the alleviation of poverty, and hunger in the developing countries of the world. Future prospects are discussed. Notably, Egypt planted Bt maize for the first time in 2008 thereby becoming the first country in the Arab world to commercialize biotech crops.

THE EVOLUTION OF RESISTANCE TO PLANT INCORPORATED PROTECTANTS BY TARGETED INSECT PESTS

EPA Science Inventory

Genetically modified (GM) crops, also known as transgenic crops, offer potential economic, environmental, and human health benefits. Balanced against these potential benefits are several possible liabilities, one of which is environmental harm. The EPA must fulfill its mandate to...

Interactions of transgenic Bacillus thuringiensis insecticidal crops with spiders (Araneae)

USDA-ARS?s Scientific Manuscript database

Genetically modified crops expressing insecticidal proteins from Bacillus thuringiensis (Bt) have dramatically increased in acreage since their introduction in the mid-1990’s. Although the insecticidal mechanisms of Bt target specific pests, concerns persist regarding direct and indirect effects on...

Swedish farmers attitudes, expectations and fears in relation to growing genetically modified crops.

PubMed

Lehrman, Anna; Johnson, Katy

2008-01-01

This study evaluates a survey about Swedish farmers' attitude towards genetically modified (GM) crops, and their perception concerning potential benefits and drawbacks that cropping of an insect resistant (IR) GM variety would involve. The questions were "tick a box" choices, included in a yearly omnibus survey sent to 1000 Swedish farmers (68% response rate). The results showed that a majority of the farmers were negative, although almost one third claimed to be neutral to GM crops. The farmers recognized several benefits both in terms of agricultural production and for the environment, but they were also highly concerned about the consumers' unwillingness to buy GM products. Farmers perceived an increase in yield, but nearly as many farmers thought that there would be no benefits with growing an IR GM crop. Several differences in hopes and concerns of the farmers surveyed were revealed when they were divided in positive, neutral and negative groups. Farmers negative to GM were more concerned than positive farmers about IR GM crops being dangerous for humans, livestock or other organisms to consume. GM-positive farmers seemed to be most concerned about potential problems with growing a marketable crop and expensive seeds, but saw a reduced health risk to the grower, due to less use of pesticides, as a possible benefit. The results among the GM-neutral farmers were in most cases closely related to the positive farmers' choices, implying that they believe that there are advantages with growing an IR GM crop, but also fear potential drawbacks. This general uncertainty about GM IR crops may prevent them from accepting the new technology.

Towards social acceptance of plant breeding by genome editing.

PubMed

Araki, Motoko; Ishii, Tetsuya

2015-03-01

Although genome-editing technologies facilitate efficient plant breeding without introducing a transgene, it is creating indistinct boundaries in the regulation of genetically modified organisms (GMOs). Rapid advances in plant breeding by genome-editing require the establishment of a new global policy for the new biotechnology, while filling the gap between process-based and product-based GMO regulations. In this Opinion article we review recent developments in producing major crops using genome-editing, and we propose a regulatory model that takes into account the various methodologies to achieve genetic modifications as well as the resulting types of mutation. Moreover, we discuss the future integration of genome-editing crops into society, specifically a possible response to the 'Right to Know' movement which demands labeling of food that contains genetically engineered ingredients. Copyright © 2015 Elsevier Ltd. All rights reserved.

[Review of transgenic crop breeding in China].

PubMed

Huang, Dafang

2015-06-01

The development history and fundamental experience of transgenic crops (Genetically modified crops) breeding in China for near 30 years were reviewed. It was illustrated that a scientific research, development and industrialization system of transgenic crops including gene discovery, transformation, variety breeding, commercialization, application and biosafety assessment has been initially established which was few in number in the world. The research innovative capacity of transgenic cotton, rice and corn has been lifted. The research features as well as relative advantages have been initially formed. The problems and challenges of transgenic crop development were discussed. In addition, three suggestions of promoting commercialization, speeding up implementation of the Major National Project of GM Crops, and enhancing science communication were made.

Experience from use of GMOs in Argentinian agriculture, economy and environment.

PubMed

Burachik, Moisés

2010-11-30

Argentina is the second largest grower of genetically modified (GM) crops. This high level of adoption of this new agricultural technology is the result of a complex combination of circumstances. We can identify four main causes that led to this: political support (from agriculture officials), ability to solve prevalent farmers' needs, economic and environmental factors and an early implementation of effective regulations. The political willingness to study this new technology and crops as well as the recruitment of sound professionals and scientists to perform the task was crucial. These professionals, with very diverse backgrounds, created the necessary regulatory framework to work with these new crops. Farmers played a decisive role, as adopting this new technology solved some of their agronomic problems, helped them perform more sustainable agronomic practices and provided economic benefits. Nonetheless, all these advancements had not been possible without a rational, science-based and flexible regulatory framework that would make sure that the GM crops were safe for food, feed and processing. Copyright © 2010 Elsevier B.V. All rights reserved.

Biosensors for GMO Testing: Nearly 25 Years of Research.

PubMed

Sánchez-Paniagua López, Marta; Manzanares-Palenzuela, Carmen Lorena; López-Ruiz, Beatriz

2018-09-03

In the nearly two decades since genetically modified organisms (GMOs) were first commercialized, genetically engineered crops have gained ground on their conventional counterparts, reaching 185 million hectares worldwide in 2016. The technology has bestowed most of its benefits on enhancing crop productivity with two main traits currently dominating the market: insect-resistant and herbicide-tolerant crops. Despite their rapid and vast adoption by farmers worldwide, GMOs have generated heated debates, especially in European countries (EU), driven mostly by consumers concerned about safety of transgenic foods and about the potential impact on the environment. The need to monitor and to verify the presence and the amount of GMOs in agricultural crops and in food products has generated interest in analytical methods for sensitive, accurate, rapid, and cheap detection of these products. DNA biosensors have been envisioned as a novel DNA-detection technology that would one day substitute current amplification-based methods, providing hand-held, quick, and ultrasensitive gene-level detection. This review summarizes the contributions made in nearly 20 years of research regarding the application of genosensing technology for the qualitative and quantitative determination of transgenic traits.

Tail Docking and Ear Cropping Dogs: Public Awareness and Perceptions

PubMed Central

Mills, Katelyn E.; Robbins, Jesse; von Keyserlingk, Marina A. G.

2016-01-01

Tail docking and ear cropping are two surgical procedures commonly performed on many dog breeds. These procedures are classified as medically unnecessary surgeries whose purpose is primarily cosmetic. Available attitude research surrounding these controversial practices has been limited to surveys of veterinarians and dog breeders familiar with both practices. The aim of this project was to: 1) assess public awareness of tail docking and ear cropping, 2) determine whether physical alteration of a dog affects how the dog, and 3) owner are perceived. In Experiment 1 awareness was measured using a combination of both explicit and implicit measures. We found that 42% of participants (n = 810) were unable to correctly explain the reason why tail docked and ear cropped dogs had short ears and tails. Similarly, an implicit measure of awareness (‘nature vs nurture task’), found that the majority of participants believed short tails and erect ears were a consequence of genetics rather than something the owner or breeder had done. The results obtained in Experiment 2 (n = 392) provide evidence that ear cropped and tail docked dogs are perceived differently than an identical dog in its ‘natural’ state. Modified dogs were perceived as being more aggressive, more dominant, less playful and less attractive than natural dogs. Experiment 3 (n = 410) is the first evidence that owners of modified dogs are perceived as being more aggressive, more narcissistic, less playful, less talkative and less warm compared to owners of natural dogs. Taken together, these results suggest that although a significant proportion of subjects appear unaware of the practices of tail docking and ear cropping in dogs, these procedures have significant impacts on how modified dogs and their owners are perceived by others. PMID:27348817

Tail Docking and Ear Cropping Dogs: Public Awareness and Perceptions.

PubMed

Mills, Katelyn E; Robbins, Jesse; von Keyserlingk, Marina A G

2016-01-01

Tail docking and ear cropping are two surgical procedures commonly performed on many dog breeds. These procedures are classified as medically unnecessary surgeries whose purpose is primarily cosmetic. Available attitude research surrounding these controversial practices has been limited to surveys of veterinarians and dog breeders familiar with both practices. The aim of this project was to: 1) assess public awareness of tail docking and ear cropping, 2) determine whether physical alteration of a dog affects how the dog, and 3) owner are perceived. In Experiment 1 awareness was measured using a combination of both explicit and implicit measures. We found that 42% of participants (n = 810) were unable to correctly explain the reason why tail docked and ear cropped dogs had short ears and tails. Similarly, an implicit measure of awareness ('nature vs nurture task'), found that the majority of participants believed short tails and erect ears were a consequence of genetics rather than something the owner or breeder had done. The results obtained in Experiment 2 (n = 392) provide evidence that ear cropped and tail docked dogs are perceived differently than an identical dog in its 'natural' state. Modified dogs were perceived as being more aggressive, more dominant, less playful and less attractive than natural dogs. Experiment 3 (n = 410) is the first evidence that owners of modified dogs are perceived as being more aggressive, more narcissistic, less playful, less talkative and less warm compared to owners of natural dogs. Taken together, these results suggest that although a significant proportion of subjects appear unaware of the practices of tail docking and ear cropping in dogs, these procedures have significant impacts on how modified dogs and their owners are perceived by others.

Cornell Alliance for Science Evaluation of Consensus on Genetically Modified Food Safety: Weaknesses in Study Design

PubMed Central

Antoniou, Michael N.; Robinson, Claire J.

2017-01-01

Cornell Alliance for Science has launched an initiative in which “citizen scientists” are called upon to evaluate studies on health risks of genetically modified (GM) crops and foods. The purpose is to establish whether the consensus on GM food safety claimed by the American Association for the Advancement of Science (AAAS) is supported by a review of the scientific literature. The Alliance’s citizen scientists are examining more than 12,000 publication abstracts to quantify how far the scientific literature supports the AAAS’s statement. We identify a number of fundamental weaknesses in the Alliance’s study design, including evaluation is based only on information provided in the publication abstract; there is a lack of clarity as to what material is included in the 12,000 study abstracts to be reviewed, since the number of appropriately designed investigations addressing GM food safety are few; there is uncertainty as to whether studies of toxic effects arising from GM crop-associated pesticides will be included; there is a lack of clarity regarding whether divergent yet equally valid interpretations of the same study will be taken into account; and there is no definition of the cutoff point for consensus or non-consensus on GM food safety. In addition, vital industry proprietary biosafety data on GM crops and associated pesticides are not publicly available and is thus cannot inform this project. Based on these weaknesses in the study design, we believe it is questionable as to whether any objective or meaningful conclusion can be drawn from the Alliance’s initiative. PMID:28447029

Cornell Alliance for Science Evaluation of Consensus on Genetically Modified Food Safety: Weaknesses in Study Design.

PubMed

Antoniou, Michael N; Robinson, Claire J

2017-01-01

Cornell Alliance for Science has launched an initiative in which "citizen scientists" are called upon to evaluate studies on health risks of genetically modified (GM) crops and foods. The purpose is to establish whether the consensus on GM food safety claimed by the American Association for the Advancement of Science (AAAS) is supported by a review of the scientific literature. The Alliance's citizen scientists are examining more than 12,000 publication abstracts to quantify how far the scientific literature supports the AAAS's statement. We identify a number of fundamental weaknesses in the Alliance's study design, including evaluation is based only on information provided in the publication abstract; there is a lack of clarity as to what material is included in the 12,000 study abstracts to be reviewed, since the number of appropriately designed investigations addressing GM food safety are few; there is uncertainty as to whether studies of toxic effects arising from GM crop-associated pesticides will be included; there is a lack of clarity regarding whether divergent yet equally valid interpretations of the same study will be taken into account; and there is no definition of the cutoff point for consensus or non-consensus on GM food safety. In addition, vital industry proprietary biosafety data on GM crops and associated pesticides are not publicly available and is thus cannot inform this project. Based on these weaknesses in the study design, we believe it is questionable as to whether any objective or meaningful conclusion can be drawn from the Alliance's initiative.

Does the growing of Bt maize change populations or ecological functions of non-target animals compared to the growing of conventional non-GM maize? A systematic review protocol

USDA-ARS?s Scientific Manuscript database

Since 1996, genetically modified (GM) crops have been grown on an ever increasing area worldwide. Maize producing a Cry protein from the bacterium Bacillus thuringiensis (Bt) was among the first GM crops released for commercial production and it is the only GM crop currently cultivated in Europe. A ...

Trends in pesticide use on soybean, corn and cotton since the introduction of major genetically modified crops in the United States

USGS Publications Warehouse

Coupe, Richard H.; Capel, Paul D.

2016-01-01

BACKGROUNDGenetically modified (GM) varieties of soybean, corn and cotton have largely replaced conventional varieties in the United States. The most widely used applications of GM technology have been the development of crops that are resistant to a specific broad-spectrum herbicide (primarily glyphosate) or that produce insecticidal compounds within the plant itself. With the widespread adoption of GM crops, a decline in the use of conventional pesticides was expected.RESULTSThere has been a reduction in the annual herbicide application rate to corn since the advent of GM crops, but the herbicide application rate is mostly unchanged for cotton. Herbicide use on soybean has increased. There has been a substantial reduction in the amount of insecticides used on both corn and cotton since the introduction of GM crops.CONCLUSIONSThe observed changes in pesticide use are likely to be the result of many factors, including the introduction of GM crops, regulatory restrictions on some conventional pesticides, introduction of new pesticide technologies and changes in farming practices. In order to help protect human and environmental health and to help agriculture plan for the future, more detailed and complete documentation on pesticide use is needed on a frequent and ongoing basis.

Recent patents on biosafety strategies of selectable marker genes in genetically modified crops.

PubMed

Jiang, Yiming; Hu, Xiaoning; Huang, Haiying

2014-01-01

Genetically modified crops (GMCs) have been planted world wide since 1990s, but the potential insecurity of selectable marker genes raises the questions about GMC safety. Therefore, several researches have been conducted on marker gene safety issues and recently several patents have been issued on this subject. There are two main approaches to achieve this goal: seeking the biosafety selectable marker and eliminating these insecure marker genes after transformation. Results show that these two systems are quite effective. Recent patents on the two ways are discussed in this review.

Impact of Bt crops on non-target organisms – 3 systematic reviews

USDA-ARS?s Scientific Manuscript database

The cultivation of genetically modified (GM) crops producing Cry toxins, originating from the bacterium Bacillus thuringiensis (Bt), has raised environmental concerns over their sustainable use and consequences for biodiversity and ecosystem services in agricultural land. During the last two decades...

Expression of chloroperoxidase from Pseudomonas pyrrocinia in tobacco plastids for fungal resistance

USDA-ARS?s Scientific Manuscript database

While genetic improvement of susceptible crop species may enhance resistance to microbial pathogens and facilitate reduced pesticide load, the possibility for transmission of novel genes to wild relatives has hampered acceptance of genetically modified (GM) crops in some markets. Chloroplast transf...

Bt crop effects on functional guilds of non-target arthropods: A meta-analysis (journal)

EPA Science Inventory

Background: Uncertainty persists over the environmental effects of genetically-engineered crops that produce the insecticidal Cry proteins of Bacillus thuringiensis (Bt). We performed meta-analyses on a modified public database to synthesize current knowledge about the effects of...

Development of a PCR Diagnostic System for Iris yellow spot tospovirus in Quarantine

PubMed Central

Shin, Yong-Gil; Rho, Jae-Young

2014-01-01

Iris yellow spot virus (IYSV) is a plant pathogenic virus which has been reported to continuously occur in onion bulbs, allium field crops, seed crops, lisianthus, and irises. In South Korea, IYSV is a “controlled” virus that has not been reported, and inspection is performed when crops of the genus Iris are imported into South Korea. In this study, reverse-transcription polymerase chain reaction (RT-PCR) and nested PCR inspection methods, which can detect IYSV, from imported crops of the genus Iris at quarantine sites, were developed. In addition, a modified positive plasmid, which can be used as a positive control during inspection, was developed. This modified plasmid can facilitate a more accurate inspection by enabling the examination of a laboratory contamination in an inspection system. The inspection methods that were developed in this study are expected to contribute, through the prompt and accurate inspection of IYSV at quarantine sites to the plant quarantine in South Korea. PMID:25506310

Calibration of mass transfer-based models to predict reference crop evapotranspiration

NASA Astrophysics Data System (ADS)

Valipour, Mohammad

2017-05-01

The present study aims to compare mass transfer-based models to determine the best model under different weather conditions. The results showed that the Penman model estimates reference crop evapotranspiration better than other models in most provinces of Iran (15 provinces). However, the values of R 2 were less than 0.90 for 24 provinces of Iran. Therefore, the models were calibrated, and precision of estimation was increased (the values of R 2 were less than 0.90 for only ten provinces in the modified models). The mass transfer-based models estimated reference crop evapotranspiration in the northern (near the Caspian Sea) and southern (near the Persian Gulf) Iran (annual relative humidity more than 65 %) better than other provinces. The best values of R 2 were 0.96 and 0.98 for the Trabert and Rohwer models in Ardabil (AR) and Mazandaran (MZ) provinces before and after calibration, respectively. Finally, a list of the best performances of each model was presented to use other regions and next studies according to values of mean, maximum, and minimum temperature, relative humidity, and wind speed. The best weather conditions to use mass transfer-based equations are 8-18 °C (with the exception of Ivanov), <25.5 °C, <15 °C, >55 % for mean, maximum, and minimum temperature, and relative humidity, respectively.

A novel quadruplex real-time PCR method for simultaneous detection of Cry2Ae and two genetically modified cotton events (GHB119 and T304-40).

PubMed

Li, Xiang; Wang, Xiuxiu; Yang, Jielin; Liu, Yueming; He, Yuping; Pan, Liangwen

2014-05-16

To date, over 150 genetically modified (GM) crops are widely cultivated. To comply with regulations developed for genetically modified organisms (GMOs), including labeling policies, many detection methods for GMO identification and quantification have been developed. To detect the entrance and exit of unauthorized GM crop events in China, we developed a novel quadruplex real-time PCR method for simultaneous detection and quantification of GM cotton events GHB119 and T304-40 in cotton-derived products (based on the 5'-flanking sequence) and the insect-resistance gene Cry2Ae. The limit of detection was 10 copies for GHB119 and Cry2Ae and 25 copies for T304-40. The limit of quantification was 25 copies for GHB119 and Cry2Ae and 50 copies for T304-40. Moreover, low bias and acceptable standard deviation and relative standard deviation values were obtained in quantification analysis of six blind samples containing different GHB119 and T304-40 ingredients. The developed quadruplex quantitative method could be used for quantitative detection of two GM cotton events (GHB119 and T304-40) and Cry2Ae gene ingredient in cotton derived products.

A novel quadruplex real-time PCR method for simultaneous detection of Cry2Ae and two genetically modified cotton events (GHB119 and T304-40)

PubMed Central

2014-01-01

Background To date, over 150 genetically modified (GM) crops are widely cultivated. To comply with regulations developed for genetically modified organisms (GMOs), including labeling policies, many detection methods for GMO identification and quantification have been developed. Results To detect the entrance and exit of unauthorized GM crop events in China, we developed a novel quadruplex real-time PCR method for simultaneous detection and quantification of GM cotton events GHB119 and T304-40 in cotton-derived products (based on the 5′-flanking sequence) and the insect-resistance gene Cry2Ae. The limit of detection was 10 copies for GHB119 and Cry2Ae and 25 copies for T304-40. The limit of quantification was 25 copies for GHB119 and Cry2Ae and 50 copies for T304-40. Moreover, low bias and acceptable standard deviation and relative standard deviation values were obtained in quantification analysis of six blind samples containing different GHB119 and T304-40 ingredients. Conclusions The developed quadruplex quantitative method could be used for quantitative detection of two GM cotton events (GHB119 and T304-40) and Cry2Ae gene ingredient in cotton derived products. PMID:24884946

Innovative farmers and regulatory gatekeepers: Genetically modified crops regulation and adoption in developing countries

PubMed Central

Sinebo, Woldeyesus; Maredia, Karim

2016-01-01

ABSTRACT The regulation of genetically modified (GM) crops is a topical issue in agriculture and environment over the past 2 decades. The objective of this paper is to recount regulatory and adoption practices in some developing countries that have successfully adopted GM crops so that aspiring countries may draw useful lessons and best practices for their biosafatey regulatory regimes. The first 11 mega-GM crops growing countries each with an area of more than one million hectares in 2014 were examined. Only five out of the 11 countries had smooth and orderly adoption of these crops as per the regulatory requirement of each country. In the remaining 6 countries (all developing countries), GM crops were either introduced across borders without official authorization, released prior to regulatory approval or unapproved seeds were sold along with the approved ones in violation to the existing regulations. Rapid expansion of transgenic crops over the past 2 decades in the developing world was a result of an intense desire by farmers to adopt these crops irrespective of regulatory roadblocks. Lack of workable biosafety regulatory system and political will to support GM crops encouraged unauthorized access to GM crop varieties. In certain cases, unregulated access in turn appeared to result in the adoption of substandard or spurious technology which undermined performance and productivity. An optimal interaction among the national agricultural innovation systems, biosafety regulatory bodies, biotech companies and high level policy makers is vital in making a workable regulated progress in the adoption of GM crops. Factoring forgone opportunities to farmers to benefit from GM crops arising from overregulation into biosafety risk analysis and decision making is suggested. Building functional biosafety regulatory systems that balances the needs of farmers to access and utilize the GM technology with the regulatory imperatives to ensure adequate safety to the environment and human health is recommended. PMID:26954893

A Refined Crop Drought Monitoring Method Based on the Chinese GF-1 Wide Field View Data

PubMed Central

Chang, Sheng; Wu, Bingfang; Yan, Nana; Zhu, Jianjun; Wen, Qi; Xu, Feng

2018-01-01

In this study, modified perpendicular drought index (MPDI) models based on the red-near infrared spectral space are established for the first time through the analysis of the spectral characteristics of GF-1 wide field view (WFV) data, with a high spatial resolution of 16 m and the highest frequency as high as once every 4 days. GF-1 data was from the Chinese-made, new-generation high-resolution GF-1 remote sensing satellites. Soil-type spatial data are introduced for simulating soil lines in different soil types for reducing errors of using same soil line. Multiple vegetation indices are employed to analyze the response to the MPDI models. Relative soil moisture content (RSMC) and precipitation data acquired at selected stations are used to optimize the drought models, and the best one is the Two-band enhanced vegetation index (EVI2)-based MPDI model. The crop area that was statistically significantly affected by drought from a local governmental department, and used for validation. High correlations and small differences in drought-affected crop area was detected between the field observation data from the local governmental department and the EVI2-based MPDI results. The percentage of bias is between −21.8% and 14.7% in five sub-areas, with an accuracy above 95% when evaluating the performance via the data for the whole study region. Generally the proposed EVI2-based MPDI for GF-1 WFV data has great potential for reliably monitoring crop drought at a relatively high frequency and spatial scale. Currently there is almost no drought model based on GF-1 data, a full exploitation of the advantages of GF-1 satellite data and further improvement of the capacity to observe ground surface objects can provide high temporal and spatial resolution data source for refined monitoring of crop droughts. PMID:29690639

A Refined Crop Drought Monitoring Method Based on the Chinese GF-1 Wide Field View Data.

PubMed

Chang, Sheng; Wu, Bingfang; Yan, Nana; Zhu, Jianjun; Wen, Qi; Xu, Feng

2018-04-23

In this study, modified perpendicular drought index (MPDI) models based on the red-near infrared spectral space are established for the first time through the analysis of the spectral characteristics of GF-1 wide field view (WFV) data, with a high spatial resolution of 16 m and the highest frequency as high as once every 4 days. GF-1 data was from the Chinese-made, new-generation high-resolution GF-1 remote sensing satellites. Soil-type spatial data are introduced for simulating soil lines in different soil types for reducing errors of using same soil line. Multiple vegetation indices are employed to analyze the response to the MPDI models. Relative soil moisture content (RSMC) and precipitation data acquired at selected stations are used to optimize the drought models, and the best one is the Two-band enhanced vegetation index (EVI2)-based MPDI model. The crop area that was statistically significantly affected by drought from a local governmental department, and used for validation. High correlations and small differences in drought-affected crop area was detected between the field observation data from the local governmental department and the EVI2-based MPDI results. The percentage of bias is between −21.8% and 14.7% in five sub-areas, with an accuracy above 95% when evaluating the performance via the data for the whole study region. Generally the proposed EVI2-based MPDI for GF-1 WFV data has great potential for reliably monitoring crop drought at a relatively high frequency and spatial scale. Currently there is almost no drought model based on GF-1 data, a full exploitation of the advantages of GF-1 satellite data and further improvement of the capacity to observe ground surface objects can provide high temporal and spatial resolution data source for refined monitoring of crop droughts.

Selection of focal earthworm species as non-target soil organisms for environmental risk assessment of genetically modified plants.

PubMed

van Capelle, Christine; Schrader, Stefan; Arpaia, Salvatore

2016-04-01

By means of a literature survey, earthworm species of significant relevance for soil functions in different biogeographical regions of Europe (Atlantic, Boreal, Mediterranean) were identified. These focal earthworm species, defined here according to the EFSA Guidance Document on the environmental risk assessment (ERA) of genetically modified plants, are typical for arable soils under crop rotations with maize and/or potatoes within the three regions represented by Ireland, Sweden and Spain, respectively. Focal earthworm species were selected following a matrix of four steps: Identification of functional groups, categorization of non-target species, ranking species on ecological criteria, and final selection of focal species. They are recommended as appropriate non-target organisms to assess environmental risks of genetically modified (GM) crops; in this case maize and potatoes. In total, 44 literature sources on earthworms in arable cropping systems including maize or potato from Ireland, Sweden and Spain were collected, which present information on species diversity, individual density and specific relevance for soil functions. By means of condensed literature data, those species were identified which (i) play an important functional role in respective soil systems, (ii) are well adapted to the biogeographical regions, (iii) are expected to occur in high abundances under cultivation of maize or potato and (iv) fulfill the requirements for an ERA test system based on life-history traits. First, primary and secondary decomposers were identified as functional groups being exposed to the GM crops. In a second step, anecic and endogeic species were categorized as potential species. In step three, eight anecic and endogeic earthworm species belonging to the family Lumbricidae were ranked as relevant species: Aporrectodea caliginosa, Aporrectodea rosea, Aporrectodea longa, Allolobophora chlorotica, Lumbricus terrestris, Lumbricus friendi, Octodrilus complanatus and Octolasion cyaneum. Five out of these eight species are relevant for each biogeographical region with an overlap in the species. Finally, the earthworm species Ap. caliginosa (endogeic, secondary decomposer) and L. terrestris (anecic, primary decomposer) were selected as focal species. In the Mediterranean region L. terrestris may be substituted by the more relevant anecic species L. friendi. The selected focal species are recommended to be included in a standardized laboratory ERA test system based on life-history traits. Copyright © 2016 Elsevier B.V. All rights reserved.

Response of Pennsylvania native plant species to dicamba and/or glyphosate

EPA Science Inventory

Weeds may become resistant to intensive and extensive use of specific herbicides associated with the growth of herbicide tolerant crops, e.g., the use of glyphosate for weed control with glyphosate tolerant soybeans. To counter this resistance, crops modified to contain genes for...

Rainfall model investigation and scenario analyses of the effect of government reforestation policy on seasonal rainfalls: A case study from Northern Thailand

NASA Astrophysics Data System (ADS)

Duangdai, Eakkapong; Likasiri, Chulin

2017-03-01

In this work, 4 models for predicting rainfall amounts are investigated and compared using Northern Thailand's seasonal rainfall data for 1973-2008. Two models, global temperature, forest area and seasonal rainfall (TFR) and modified TFR based on a system of differential equations, give the relationships between global temperature, Northern Thailand's forest cover and seasonal rainfalls in the region. The other two models studied are time series and Autoregressive Moving Average (ARMA) models. All models are validated using the k-fold cross validation method with the resulting errors being 0.971233, 0.740891, 2.376415 and 2.430891 for time series, ARMA, TFR and modified TFR models, respectively. Under Business as Usual (BaU) scenario, seasonal rainfalls in Northern Thailand are projected through the year 2020 using all 4 models. TFR and modified TFR models are also used to further analyze how global temperature rise and government reforestation policy affect seasonal rainfalls in the region. Rainfall projections obtained via the two models are also compared with those from the International Panel on Climate Change (IPCC) under IS92a scenario. Results obtained through a mathematical model for global temperature, forest area and seasonal rainfall show that the higher the forest cover, the less fluctuation there is between rainy-season and summer rainfalls. Moreover, growth in forest cover also correlates with an increase in summer rainfalls. An investigation into the relationship between main crop productions and rainfalls in dry and rainy seasons indicates that if the rainy-season rainfall is high, that year's main-crop rice production will decrease but the second-crop rice, maize, sugarcane and soybean productions will increase in the following year.

Simulating large-scale crop yield by using perturbed-parameter ensemble method

NASA Astrophysics Data System (ADS)

Iizumi, T.; Yokozawa, M.; Sakurai, G.; Nishimori, M.

2010-12-01

Toshichika Iizumi, Masayuki Yokozawa, Gen Sakurai, Motoki Nishimori Agro-Meteorology Division, National Institute for Agro-Environmental Sciences, Japan Abstract One of concerning issues of food security under changing climate is to predict the inter-annual variation of crop production induced by climate extremes and modulated climate. To secure food supply for growing world population, methodology that can accurately predict crop yield on a large scale is needed. However, for developing a process-based large-scale crop model with a scale of general circulation models (GCMs), 100 km in latitude and longitude, researchers encounter the difficulties in spatial heterogeneity of available information on crop production such as cultivated cultivars and management. This study proposed an ensemble-based simulation method that uses a process-based crop model and systematic parameter perturbation procedure, taking maize in U.S., China, and Brazil as examples. The crop model was developed modifying the fundamental structure of the Soil and Water Assessment Tool (SWAT) to incorporate the effect of heat stress on yield. We called the new model PRYSBI: the Process-based Regional-scale Yield Simulator with Bayesian Inference. The posterior probability density function (PDF) of 17 parameters, which represents the crop- and grid-specific features of the crop and its uncertainty under given data, was estimated by the Bayesian inversion analysis. We then take 1500 ensemble members of simulated yield values based on the parameter sets sampled from the posterior PDF to describe yearly changes of the yield, i.e. perturbed-parameter ensemble method. The ensemble median for 27 years (1980-2006) was compared with the data aggregated from the county yield. On a country scale, the ensemble median of the simulated yield showed a good correspondence with the reported yield: the Pearson’s correlation coefficient is over 0.6 for all countries. In contrast, on a grid scale, the correspondence is still high in most grids regardless of the countries. However, the model showed comparatively low reproducibility in the slope areas, such as around the Rocky Mountains in South Dakota, around the Great Xing'anling Mountains in Heilongjiang, and around the Brazilian Plateau. As there is a wide-ranging local climate conditions in the complex terrain, such as the slope of mountain, the GCM grid-scale weather inputs is likely one of major sources of error. The results of this study highlight the benefits of the perturbed-parameter ensemble method in simulating crop yield on a GCM grid scale: (1) the posterior PDF of parameter could quantify the uncertainty of parameter value of the crop model associated with the local crop production aspects; (2) the method can explicitly account for the uncertainty of parameter value in the crop model simulations; (3) the method achieve a Monte Carlo approximation of probability of sub-grid scale yield, accounting for the nonlinear response of crop yield to weather and management; (4) the method is therefore appropriate to aggregate the simulated sub-grid scale yields to a grid-scale yield and it may be a reason for high performance of the model in capturing inter-annual variation of yield.

Trends in global approvals of biotech crops (1992–2014)

PubMed Central

Aldemita, Rhodora R; Reaño, Ian Mari E; Solis, Renando O; Hautea, Randy A

2015-01-01

ABSTRACT With the increasing number of genetically modified (GM) events, traits, and crops that are developed to benefit the global population, approval of these technologies for food, feed, cultivation and import in each country may vary depending on needs, demand and trade interest. ISAAA established a GMO Approval Database to document global approvals of biotech crops. GM event name, crops, traits, developer, year of approval for cultivation, food/feed, import, and relevant dossiers were sourced from credible government regulatory websites and biosafety clearinghouses. This paper investigates the trends in GM approvals for food, feed and cultivation based on the number of approving countries, GM crops, events, and traits in the last 23 y (1992–2014), rationale for approval, factors influencing approvals, and their implications in GM crop adoption. Results show that in 2014, there was an accumulative increase in the number of countries granting approvals at 29 (79% developing countries) for commercial cultivation and 31 (70% developing countries) for food and 19 (80% developing developing) for feed; 2012 had the highest number of approving countries and cultivation approvals; 2011 had the highest number of country approvals for feed, and 2014 for food approvals. Herbicide tolerance trait had the highest events approved, followed by insect tolerance traits. Approvals for food product quality increased in the second decade. Maize had the highest number of events approved (single and stacked traits), and stacked traits product gradually increased which is already 30% of the total trait approvals. These results may indicate understanding and acceptance of countries to enhance regulatory capability to be able to benefit from GM crop commercialization. Hence, the paper provided information on the trends on the growth of the GM crop industry in the last 23 y which may be vital in predicting future GM crops and traits. PMID:26039675

Trends in global approvals of biotech crops (1992-2014).

PubMed

Aldemita, Rhodora R; Reaño, Ian Mari E; Solis, Renando O; Hautea, Randy A

2015-01-01

With the increasing number of genetically modified (GM) events, traits, and crops that are developed to benefit the global population, approval of these technologies for food, feed, cultivation and import in each country may vary depending on needs, demand and trade interest. ISAAA established a GMO Approval Database to document global approvals of biotech crops. GM event name, crops, traits, developer, year of approval for cultivation, food/feed, import, and relevant dossiers were sourced from credible government regulatory websites and biosafety clearinghouses. This paper investigates the trends in GM approvals for food, feed and cultivation based on the number of approving countries, GM crops, events, and traits in the last 23 y (1992-2014), rationale for approval, factors influencing approvals, and their implications in GM crop adoption. Results show that in 2014, there was an accumulative increase in the number of countries granting approvals at 29 (79% developing countries) for commercial cultivation and 31 (70% developing countries) for food and 19 (80% developing developing) for feed; 2012 had the highest number of approving countries and cultivation approvals; 2011 had the highest number of country approvals for feed, and 2014 for food approvals. Herbicide tolerance trait had the highest events approved, followed by insect tolerance traits. Approvals for food product quality increased in the second decade. Maize had the highest number of events approved (single and stacked traits), and stacked traits product gradually increased which is already 30% of the total trait approvals. These results may indicate understanding and acceptance of countries to enhance regulatory capability to be able to benefit from GM crop commercialization. Hence, the paper provided information on the trends on the growth of the GM crop industry in the last 23 y which may be vital in predicting future GM crops and traits.

Effects of plants genetically modified for insect resistance on nontarget organisms.

PubMed

O'Callaghan, Maureen; Glare, Travis R; Burgess, Elisabeth P J; Malone, Louise A

2005-01-01

Insect resistance, based on Bacillus thuringiensis (Bt) endotoxins, is the second most widely used trait (after herbicide resistance) in commercial genetically modified (GM) crops. Other modifications for insect resistance, such as proteinase inhibitors and lectins, are also being used in many experimental crops. The extensive testing on nontarget plant-feeding insects and beneficial species that has accompanied the long-term and wide-scale use of Bt plants has not detected significant adverse effects. GM plants expressing other insect-resistant proteins that have a broader spectrum of activity have been tested on only a limited number of nontarget species. Little is known about the persistence of transgene-derived proteins in soil, with the exception of Bt endotoxins, which can persist in soil for several months. Bt plants appear to have little impact on soil biota such as earthworms, collembolans, and general soil microflora. Further research is required on the effects of GM plants on soil processes such as decomposition. Assessment of nontarget impacts is an essential part of the risk assessment process for insect-resistant GM plants.

Global income and production impacts of using GM crop technology 1996–2013

PubMed Central

Brookes, Graham; Barfoot, Peter

2015-01-01

abstract This paper provides an economic assessment of the value of using genetically modified (GM) crop technology in agriculture at the farm level. It follows and updates earlier annual studies which examined economic impacts on yields, key costs of production, direct farm income and effects, and impacts on the production base of the 4 main crops of soybeans, corn, cotton and canola. The commercialisation of GM crops has continued to occur at a rapid rate since the mid 1990s, with important changes in both the overall level of adoption and impact occurring in 2013. This annual updated analysis shows that there continues to be very significant net economic benefits at the farm level amounting to $20.5 billion in 2013 and $133.4 billion for the 18 years period (in nominal terms). These economic gains have been divided roughly 50% each to farmers in developed and developing countries. About 70% of the gains have derived from yield and production gains with the remaining 30% coming from cost savings. The technology have also made important contributions to increasing global production levels of the 4 main crops, having added 138 million tonnes and 273 million tonnes respectively, to the global production of soybeans and maize since the introduction of the technology in the mid 1990s. PMID:25738324

Global income and production impacts of using GM crop technology 1996-2013.

PubMed

Brookes, Graham; Barfoot, Peter

2015-01-01

This paper provides an economic assessment of the value of using genetically modified (GM) crop technology in agriculture at the farm level. It follows and updates earlier annual studies which examined economic impacts on yields, key costs of production, direct farm income and effects, and impacts on the production base of the 4 main crops of soybeans, corn, cotton and canola. The commercialisation of GM crops has continued to occur at a rapid rate since the mid 1990s, with important changes in both the overall level of adoption and impact occurring in 2013. This annual updated analysis shows that there continues to be very significant net economic benefits at the farm level amounting to $20.5 billion in 2013 and $133.4 billion for the 18 years period (in nominal terms). These economic gains have been divided roughly 50% each to farmers in developed and developing countries. About 70% of the gains have derived from yield and production gains with the remaining 30% coming from cost savings. The technology have also made important contributions to increasing global production levels of the 4 main crops, having added 138 million tonnes and 273 million tonnes respectively, to the global production of soybeans and maize since the introduction of the technology in the mid 1990s.

Microwave Soil Moisture Retrieval Under Trees Using a Modified Tau-Omega Model

USDA-ARS?s Scientific Manuscript database

IPAD is to provide timely and accurate estimates of global crop conditions for use in up-to-date commodity intelligence reports. A crucial requirement of these global crop yield forecasts is the regional characterization of surface and sub-surface soil moisture. However, due to the spatial heterogen...

An animal welfare perspective on animal testing of GMO crops.

PubMed

Kolar, Roman; Rusche, Brigitte

2008-01-01

The public discussion on the introduction of agro-genetic engineering focuses mainly on economical, ecological and human health aspects. The fact is neglected that laboratory animals must suffer before either humans or the environment are affected. However, numerous animal experiments are conducted for toxicity testing and authorisation of genetically modified plants in the European Union. These are ethically questionable, because death and suffering of the animals for purely commercial purposes are accepted. Therefore, recent political initiatives to further increase animal testing for GMO crops must be regarded highly critically. Based on concrete examples this article demonstrates that animal experiments, on principle, cannot provide the expected protection of users and consumers despite all efforts to standardise, optimise or extend them.

Safety assessments and public concern for genetically modified food products: the American view.

PubMed

Harlander, Susan K

2002-01-01

In the relatively short time since their commercial introduction in 1996, genetically modified (GM) crops have been rapidly adopted in the United States GM crops are regulated through a coordinated framework developed in 1992 and administered by three agencies-the US Department of Agriculture (USDA) that ensures the products are safe to grow, the Environmental Protection Agency (EPA) that ensures the products are safe for the environment, and the Food and Drug Administration (FDA) that ensures the products are safe to eat. Rigorous food and environmental safety assessments must be completed before GM crops can be commercialized. Fifty-one products have been reviewed by the FDA, including several varieties of corn, soybeans, canola, cotton, rice, sugar beets, potatoes, tomatoes, squash, papaya, and flax. Because FDA considers these crops "substantially equivalent" to their conventional counterparts, no special labeling is required for GM crops in the United States and they are managed as commodities with no segregation or identity preservation. GM crops have thus made their way through commodity distribution channels into thousands of ingredients used in processed foods. It has been estimated that 70% to 85% of processed foods on supermarket shelves in the United States today contain one or more ingredients potentially derived from GM crops. The food industry and retail industry have been monitoring the opinions of their consumers on the GM issue for the past several years. Numerous independent groups have also surveyed consumer concerns about GM foods. The results of these surveys are shared and discussed here.

Mixed cropping regimes promote the soil fungal community under zero tillage.

PubMed

Silvestro, L B; Biganzoli, F; Stenglein, S A; Forjan, H; Manso, L; Moreno, M V

2018-07-01

Fungi of yield soils represent a significant portion of the microbial biomass and reflect sensitivity to changes in the ecosystem. Our hypothesis was that crops included in cropping regimes under the zero tillage system modify the structure of the soil fungi community. Conventional and molecular techniques provide complementary information for the analysis of diversity of fungal species and successful information to accept our hypothesis. The composition of the fungal community varied according to different crops included in the cropping regimes. However, we detected other factors as sources of variation among them, season and sampling depth. The mixed cropping regimes including perennial pastures and one crop per year promote fungal diversity and species with potential benefit to soil and crop. The winter season and 0-5 cm depth gave the largest evenness and fungal diversity. Trichoderma aureoviride and Rhizopus stolonifer could be used for monitoring changes in soil under zero tillage.

TRAINING AND TECHNOLOGY TRANSFER OF ORD-DEVELOPED MOLECULAR BIOLOGY-BASED TOOLS: 1. ENDOCRINE DISRUPTING CHEMICAL FATHEAD MINNOW BIOASSAY; 2. MICROBIAL SOURCE TRACKING METHODS; 3. FIELD IDENTIFICATION OF GENETICALLY MODIFIED CROP PLANTS

EPA Science Inventory

Region 9 RSL and ORD/NERL scientists developed a course for the RSC (Regional Science Council)-sponsored training class on Molecular Biology Concepts. The training will take place as part of the technology transfer of a fish EDC (endocrine disrupting chemical) bioassay to the Reg...

Instant, Visual, and Instrument-Free Method for On-Site Screening of GTS 40-3-2 Soybean Based on Body-Heat Triggered Recombinase Polymerase Amplification.

PubMed

Wang, Rui; Zhang, Fang; Wang, Liu; Qian, Wenjuan; Qian, Cheng; Wu, Jian; Ying, Yibin

2017-04-18

On-site monitoring the plantation of genetically modified (GM) crops is of critical importance in agriculture industry throughout the world. In this paper, a simple, visual and instrument-free method for instant on-site detection of GTS 40-3-2 soybean has been developed. It is based on body-heat recombinase polymerase amplification (RPA) and followed with naked-eye detection via fluorescent DNA dye. Combining with extremely simplified sample preparation, the whole detection process can be accomplished within 10 min and the fluorescent results can be photographed by an accompanied smart phone. Results demonstrated a 100% detection rate for screening of practical GTS 40-3-2 soybean samples by 20 volunteers under different ambient temperatures. This method is not only suitable for on-site detection of GM crops but also demonstrates great potential to be applied in other fields.

Resistance Management Research for PIP Crops

EPA Science Inventory

A significant increase in genetically modified corn planting driven by biofuel demand is expected for future planted acreages approaching 80% of total corn plantings in 2009. As demand increases, incidence of farmer non-compliance with mandated non-genetically modified refuge is...

Penman-Monteith approaches for estimating crop evapotranspiration in screenhouses--a case study with table-grape.

PubMed

Pirkner, Moran; Dicken, Uri; Tanny, Josef

2014-07-01

In arid and semi-arid regions many crops are grown under screens or in screenhouses to protect them from excessive radiation, strong winds, hailstorms and insects, and to reduce crop water requirements. Screens modify the crop microclimate, which means that it is necessary to accurately estimate crop water use under screens in order to improve the irrigation management and thereby increase water-use efficiency. The goal of the present study was to develop a set of calibrated relationships between inside and outside climatic variables, which would enable growers to predict crop water use under screens, based on standard external meteorological measurements and evapotranspiration (ET) models. Experiments were carried out in the Jordan Valley region of eastern Israel in a table-grape vineyard that was covered with a transparent screen providing 10% shading. An eddy covariance system was deployed in the middle of the vineyard and meteorological variables were measured inside and outside the screenhouse. Two ET models were evaluated: a classical Penman-Monteith model (PM) and a Penman-Monteith model modified for screenhouse conditions by the inclusion of an additional boundary-layer resistance (PMsc). Energy-balance closure analysis, presented as a linear relation between half-hourly values of available and consumed energy (1,344 data points), yielded the regression Y=1.05X-9.93 (W m(-2)), in which Y=sum of latent and sensible heat fluxes, and X=net radiation minus soil heat flux, with R2=0.81. To compensate for overestimation of the eddy fluxes, ET was corrected by forcing the energy balance closure. Average daily ET under the screen was 5.4±0.54 mm day(-1), in general agreement with the model estimates and the applied irrigation. The results showed that measured ET under the screen was, on average, 34% lower than that estimated outside, indicating significant potential water saving through screening irrigated vineyards. The PM model was somewhat more accurate than the PMsc for estimating ET under the screen. A model sensitivity analysis illustrates how changes in certain climatic conditions or screen properties would affect evapotranspiration.

Spatial variability of chlorophyll and nitrogen content of rice from hyperspectral imagery

NASA Astrophysics Data System (ADS)

Moharana, Shreedevi; Dutta, Subashisa

2016-12-01

Chlorophyll and nitrogen are the most essential parameters for paddy crop growth. Spectroradiometric measurements were collected at canopy level during critical growth period of rice. Chemical analysis was performed to quantify the total leaf content. By exploiting the ground based measurements, regression models were established for chlorophyll and nitrogen aimed indices with their corresponding crop growth variables. Vegetation index models were developed for mapping these parameters from Hyperion imagery in an agriculture system. It was inferred that the present Simple Ratio (SR) and Leaf Nitrogen Concentration (LNC) indices, which followed a linear and nonlinear relationship respectively, were completely different from published Tian et al. (2011). The nitrogen content varied widely from 1 to 4% and only 2 to 3% for paddy crop using present modified index models and Tian et al. (2011) respectively. The modified LNC index model performed better than the established Tian et al. (2011) model as far as estimated nitrogen content from Hyperion imagery was concerned. Furthermore, within the observed chlorophyll range obtained from the studied rice varieties grown in the rice agriculture system, the index models (LNC, OASVI, Gitelson, mSR and MTCI) performed well in the spatial distribution of rice chlorophyll content from Hyperion imagery. Spatial distribution of total chlorophyll content varied widely from 1.77 to 5.81 mg/g (LNC), 3.0 to 13 mg/g (OASVI), 0.5 to 10.43 mg/g (Gitelson), 2.18 to 10.61 mg/g (mSR) and 2.90 to 5.40 mg/g (MTCI). The spatial information of these parameters will help in proper nutrient management, yield forecasting, and will serve as inputs for crop growth and forecasting models for a precision rice agriculture system.

Development of an agricultural biotechnology crop product: testing from discovery to commercialization.

PubMed

Privalle, Laura S; Chen, Jingwen; Clapper, Gina; Hunst, Penny; Spiegelhalter, Frank; Zhong, Cathy X

2012-10-17

"Genetically modified" (GM) or "biotech" crops have been the most rapidly adopted agricultural technology in recent years. The development of a GM crop encompasses trait identification, gene isolation, plant cell transformation, plant regeneration, efficacy evaluation, commercial event identification, safety evaluation, and finally commercial authorization. This is a lengthy, complex, and resource-intensive process. Crops produced through biotechnology are the most highly studied food or food component consumed. Before commercialization, these products are shown to be as safe as conventional crops with respect to feed, food, and the environment. This paper describes this global process and the various analytical tests that must accompany the product during the course of development, throughout its market life, and beyond.

Environmental impacts of genetically modified plants: A review.

PubMed

Tsatsakis, Aristidis M; Nawaz, Muhammad Amjad; Kouretas, Demetrios; Balias, Georgios; Savolainen, Kai; Tutelyan, Victor A; Golokhvast, Kirill S; Lee, Jeong Dong; Yang, Seung Hwan; Chung, Gyuhwa

2017-07-01

Powerful scientific techniques have caused dramatic expansion of genetically modified crops leading to altered agricultural practices posing direct and indirect environmental implications. Despite the enhanced yield potential, risks and biosafety concerns associated with such GM crops are the fundamental issues to be addressed. An increasing interest can be noted among the researchers and policy makers in exploring unintended effects of transgenes associated with gene flow, flow of naked DNA, weediness and chemical toxicity. The current state of knowledge reveals that GM crops impart damaging impacts on the environment such as modification in crop pervasiveness or invasiveness, the emergence of herbicide and insecticide tolerance, transgene stacking and disturbed biodiversity, but these impacts require a more in-depth view and critical research so as to unveil further facts. Most of the reviewed scientific resources provide similar conclusions and currently there is an insufficient amount of data available and up until today, the consumption of GM plant products are safe for consumption to a greater extent with few exceptions. This paper updates the undesirable impacts of GM crops and their products on target and non-target species and attempts to shed light on the emerging challenges and threats associated with it. Underpinning research also realizes the influence of GM crops on a disturbance in biodiversity, development of resistance and evolution slightly resembles with the effects of non-GM cultivation. Future prospects are also discussed. Copyright © 2017 Elsevier Inc. All rights reserved.

Suitability of non-lethal marker and marker-free systems for development of transgenic crop plants: present status and future prospects.

PubMed

Manimaran, P; Ramkumar, G; Sakthivel, K; Sundaram, R M; Madhav, M S; Balachandran, S M

2011-01-01

Genetically modified crops are one of the prudent options for enhancing the production and productivity of crop plants by safeguarding from the losses due to biotic and abiotic stresses. Agrobacterium-mediated and biolistic transformation methods are used to develop transgenic crop plants in which selectable marker genes (SMG) are generally deployed to identify 'true' transformants. The commonly used SMG obtained from prokaryotic sources when employed in transgenic plants pose risks due to their lethal nature during selection process. In the recent past, some non-lethal SMGs have been identified and used for selection of transformants with increased precision and high selection efficiency. Considering the concerns related to bio-safety of the environment, it is desirable to remove the SMG in order to maximize the commercial success through wide adoption and public acceptance of genetically modified (GM) food crops. In this review, we examine the availability, and the suitability of wide range of non-lethal selection markers and elimination of SMG methods to develop marker-free transgenics for achieving global food security. As the strategies for marker-free plants are still in proof-of-concept stage, adaptation of new genomics tools for identification of novel non-lethal marker systems and its application for developing marker-free transgenics would further strengthen the crop improvement program. Copyright © 2011 Elsevier Inc. All rights reserved.

[Labeling of food containing genetically modified organisms: international policies and Brazilian legislation].

PubMed

Costa, Thadeu Estevam Moreira Maramaldo; Marin, Victor Augustus

2011-08-01

The increase in surface area planted with genetically modified crops, with the subsequent transfer of such crops into the general environment for commercial trade, has raised questions about the safety of these products. The introduction of the Cartagena Protocol on Biosafety has led to the need to produce information and ensure training in this area for the implementation of policies on biosafety and for decision-making on the part of governments at the national, regional and international level. This article presents two main standpoints regarding the labeling of GM products (one adopted by the United States and the other by the European Union), as well as the position adopted by Brazil and its current legislation on labeling and commercial release of genetically modified (GM) products.

Resistance Management Monitoring For the US Corn Crop

EPA Science Inventory

Significant increases in genetically modified corn planting are expected for future planted acreages approaching 80% of total corn plantings anticipated by 2009. As demand increases, incidence of farmer non-compliance with mandated non-genetically modified refuge is likely to in...

Simulating unstressed crop development and growth using the Unified Plant Growth Model (UPGM)

USDA-ARS?s Scientific Manuscript database

Since development of the EPIC model in 1989, many versions of the plant growth component have been incorporated into other erosion and crop management models and subsequently modified to meet model objectives (e.g., WEPS, WEPP, SWAT, ALMANAC, GPFARM). This has resulted in different versions of the ...

Nitrogen supply and demand in short-rotation sweetgum plantations

Treesearch

D. Andrew Scott; James A. Burger; Donald J. Kaczmarek; Michael B. Kane

2004-01-01

Intensive management is crucial for optimizing hardwood plantation success, and nitrogen (N) nutrition management is one of the most important practices in intensive management. Because management of short-rotation woody crop plantations is a mixture of row-crop agriculture and plantation forestry, we tested the usefulness of an agronomic budget modified for deciduous...

[Research progress in chemical communication among insect-resistant genetically modified plants, insect pests and natural enemies].

PubMed

Liu, Qing-Song; Li, Yun-He; Chen, Xiu-Ping; Peng, Yu-Fa

2014-08-01

Semiochemicals released by plants or insects play an important role in the communication among plants, phytophagous insects and their natural enemies. They thus form a chemical information network which regulates intra- and inter-specific behaviors and sustains the composition and structure of plant and insect communities. The application of insect-resistant genetically modified (IRGM) crops may affect the chemical communication within and among the tritrophic levels, and thus cause disturbances to the biotic community structure and the stability of the farmland ecosystem. This has raised concerns about the environmental safety of IRGM crops and triggered research worldwide. In the current article we provided a brief summary of the chemical communication among plants, herbivores and natural enemies; analyzed the potential of IRGM crops to affect the chemical communication between plants and arthropods and the related mechanisms; and discussed the current research progress and the future prospects in this field. We hope that this will promote the research in this field by Chinese scientists and increase our understanding of the potential effects of growing of IRGM crops on the arthropod community structure.

Investigating Engineered Ribonucleoprotein Particles to Improve Oral RNAi Delivery in Crop Insect Pests

PubMed Central

Gillet, François-Xavier; Garcia, Rayssa A.; Macedo, Leonardo L. P.; Albuquerque, Erika V. S.; Silva, Maria C. M.; Grossi-de-Sa, Maria F.

2017-01-01

Genetically modified (GM) crops producing double-stranded RNAs (dsRNAs) are being investigated largely as an RNA interference (RNAi)-based resistance strategy against crop insect pests. However, limitations of this strategy include the sensitivity of dsRNA to insect gut nucleases and its poor insect cell membrane penetration. Working with the insect pest cotton boll weevil (Anthonomus grandis), we showed that the chimeric protein PTD-DRBD (peptide transduction domain—dsRNA binding domain) combined with dsRNA forms a ribonucleoprotein particle (RNP) that improves the effectiveness of the RNAi mechanism in the insect. The RNP slows down nuclease activity, probably by masking the dsRNA. Furthermore, PTD-mediated internalization in insect gut cells is achieved within minutes after plasma membrane contact, limiting the exposure time of the RNPs to gut nucleases. Therefore, the RNP provides an approximately 2-fold increase in the efficiency of insect gene silencing upon oral delivery when compared to naked dsRNA. Taken together, these data demonstrate the role of engineered RNPs in improving dsRNA stability and cellular entry, representing a path toward the design of enhanced RNAi strategies in GM plants against crop insect pests. PMID:28503153

Investigating Engineered Ribonucleoprotein Particles to Improve Oral RNAi Delivery in Crop Insect Pests.

PubMed

Gillet, François-Xavier; Garcia, Rayssa A; Macedo, Leonardo L P; Albuquerque, Erika V S; Silva, Maria C M; Grossi-de-Sa, Maria F

2017-01-01

Genetically modified (GM) crops producing double-stranded RNAs (dsRNAs) are being investigated largely as an RNA interference (RNAi)-based resistance strategy against crop insect pests. However, limitations of this strategy include the sensitivity of dsRNA to insect gut nucleases and its poor insect cell membrane penetration. Working with the insect pest cotton boll weevil ( Anthonomus grandis ), we showed that the chimeric protein PTD-DRBD (peptide transduction domain-dsRNA binding domain) combined with dsRNA forms a ribonucleoprotein particle (RNP) that improves the effectiveness of the RNAi mechanism in the insect. The RNP slows down nuclease activity, probably by masking the dsRNA. Furthermore, PTD-mediated internalization in insect gut cells is achieved within minutes after plasma membrane contact, limiting the exposure time of the RNPs to gut nucleases. Therefore, the RNP provides an approximately 2-fold increase in the efficiency of insect gene silencing upon oral delivery when compared to naked dsRNA. Taken together, these data demonstrate the role of engineered RNPs in improving dsRNA stability and cellular entry, representing a path toward the design of enhanced RNAi strategies in GM plants against crop insect pests.

Development and Application of Loop-Mediated Isothermal Amplification Assays for Rapid Visual Detection of cry2Ab and cry3A Genes in Genetically-Modified Crops

PubMed Central

Li, Feiwu; Yan, Wei; Long, Likun; Qi, Xing; Li, Congcong; Zhang, Shihong

2014-01-01

The cry2Ab and cry3A genes are two of the most important insect-resistant exogenous genes and had been widely used in genetically-modified crops. To develop more effective alternatives for the quick identification of genetically-modified organisms (GMOs) containing these genes, a rapid and visual loop-mediated isothermal amplification (LAMP) method to detect the cry2Ab and cry3A genes is described in this study. The LAMP assay can be finished within 60 min at an isothermal condition of 63 °C. The derived LAMP products can be obtained by a real-time turbidimeter via monitoring the white turbidity or directly observed by the naked eye through adding SYBR Green I dye. The specificity of the LAMP assay was determined by analyzing thirteen insect-resistant genetically-modified (GM) crop events with different Bt genes. Furthermore, the sensitivity of the LAMP assay was evaluated by diluting the template genomic DNA. Results showed that the limit of detection of the established LAMP assays was approximately five copies of haploid genomic DNA, about five-fold greater than that of conventional PCR assays. All of the results indicated that this established rapid and visual LAMP assay was quick, accurate and cost effective, with high specificity and sensitivity. In addition, this method does not need specific expensive instruments or facilities, which can provide a simpler and quicker approach to detecting the cry2Ab and cry3A genes in GM crops, especially for on-site, large-scale test purposes in the field. PMID:25167136

Development and application of loop-mediated isothermal amplification assays for rapid visual detection of cry2Ab and cry3A genes in genetically-modified crops.

PubMed

Li, Feiwu; Yan, Wei; Long, Likun; Qi, Xing; Li, Congcong; Zhang, Shihong

2014-08-27

The cry2Ab and cry3A genes are two of the most important insect-resistant exogenous genes and had been widely used in genetically-modified crops. To develop more effective alternatives for the quick identification of genetically-modified organisms (GMOs) containing these genes, a rapid and visual loop-mediated isothermal amplification (LAMP) method to detect the cry2Ab and cry3A genes is described in this study. The LAMP assay can be finished within 60 min at an isothermal condition of 63 °C. The derived LAMP products can be obtained by a real-time turbidimeter via monitoring the white turbidity or directly observed by the naked eye through adding SYBR Green I dye. The specificity of the LAMP assay was determined by analyzing thirteen insect-resistant genetically-modified (GM) crop events with different Bt genes. Furthermore, the sensitivity of the LAMP assay was evaluated by diluting the template genomic DNA. Results showed that the limit of detection of the established LAMP assays was approximately five copies of haploid genomic DNA, about five-fold greater than that of conventional PCR assays. All of the results indicated that this established rapid and visual LAMP assay was quick, accurate and cost effective, with high specificity and sensitivity. In addition, this method does not need specific expensive instruments or facilities, which can provide a simpler and quicker approach to detecting the cry2Ab and cry3A genes in GM crops, especially for on-site, large-scale test purposes in the field.

Simulating Crop Evapotranspiration Response under Different Planting Scenarios by Modified SWAT Model in an Irrigation District, Northwest China.

PubMed

Liu, Xin; Wang, Sufen; Xue, Han; Singh, Vijay P

2015-01-01

Modelling crop evapotranspiration (ET) response to different planting scenarios in an irrigation district plays a significant role in optimizing crop planting patterns, resolving agricultural water scarcity and facilitating the sustainable use of water resources. In this study, the SWAT model was improved by transforming the evapotranspiration module. Then, the improved model was applied in Qingyuan Irrigation District of northwest China as a case study. Land use, soil, meteorology, irrigation scheduling and crop coefficient were considered as input data, and the irrigation district was divided into subdivisions based on the DEM and local canal systems. On the basis of model calibration and verification, the improved model showed better simulation efficiency than did the original model. Therefore, the improved model was used to simulate the crop evapotranspiration response under different planting scenarios in the irrigation district. Results indicated that crop evapotranspiration decreased by 2.94% and 6.01% under the scenarios of reducing the planting proportion of spring wheat (scenario 1) and summer maize (scenario 2) by keeping the total cultivated area unchanged. However, the total net output values presented an opposite trend under different scenarios. The values decreased by 3.28% under scenario 1, while it increased by 7.79% under scenario 2, compared with the current situation. This study presents a novel method to estimate crop evapotranspiration response under different planting scenarios using the SWAT model, and makes recommendations for strategic agricultural water management planning for the rational utilization of water resources and development of local economy by studying the impact of planting scenario changes on crop evapotranspiration and output values in the irrigation district of northwest China.

Simulating Crop Evapotranspiration Response under Different Planting Scenarios by Modified SWAT Model in an Irrigation District, Northwest China

PubMed Central

Liu, Xin; Wang, Sufen; Xue, Han; Singh, Vijay P.

2015-01-01

Modelling crop evapotranspiration (ET) response to different planting scenarios in an irrigation district plays a significant role in optimizing crop planting patterns, resolving agricultural water scarcity and facilitating the sustainable use of water resources. In this study, the SWAT model was improved by transforming the evapotranspiration module. Then, the improved model was applied in Qingyuan Irrigation District of northwest China as a case study. Land use, soil, meteorology, irrigation scheduling and crop coefficient were considered as input data, and the irrigation district was divided into subdivisions based on the DEM and local canal systems. On the basis of model calibration and verification, the improved model showed better simulation efficiency than did the original model. Therefore, the improved model was used to simulate the crop evapotranspiration response under different planting scenarios in the irrigation district. Results indicated that crop evapotranspiration decreased by 2.94% and 6.01% under the scenarios of reducing the planting proportion of spring wheat (scenario 1) and summer maize (scenario 2) by keeping the total cultivated area unchanged. However, the total net output values presented an opposite trend under different scenarios. The values decreased by 3.28% under scenario 1, while it increased by 7.79% under scenario 2, compared with the current situation. This study presents a novel method to estimate crop evapotranspiration response under different planting scenarios using the SWAT model, and makes recommendations for strategic agricultural water management planning for the rational utilization of water resources and development of local economy by studying the impact of planting scenario changes on crop evapotranspiration and output values in the irrigation district of northwest China. PMID:26439928

Defining the Insect Pollinator Community Found in Iowa Corn and Soybean Fields: Implications for Pollinator Conservation.

PubMed

Wheelock, M J; Rey, K P; O'Neal, M E

2016-10-01

Although corn (Zea mays L.) and soybeans (Glycine max L.) do not require pollination, they offer floral resources used by insect pollinators. We asked if a similar community of insect pollinators visits these crops in central Iowa, a landscape dominated by corn and soybean production. We used modified pan traps (i.e., bee bowls) in both corn and soybean fields during anthesis and used nonmetric multidimensional scaling (NMS) to compare the communities found in the two crops. Summed across both crops, 6,704 individual insects were captured representing at least 60 species, morphospecies, or higher-level taxa. Thirty-four species were collected in both crops, 19 collected only in corn and seven were collected only in soybean. The most abundant taxa were Lasioglossum [Dialictus] spp., Agapostemon virescens Cresson, Melissodes bimaculata (Lepeletier), and Toxomerus marginatus (Say), which accounted for 65% of the insect pollinators collected from both crops. Although social bees (Apis mellifera L. and Bombus spp.) were found in both crops, they accounted for only 0.5% of all insects captured. The NMS analysis revealed a shared community of pollinators composed of mostly solitary, ground nesting bees. Many of these species have been found in other crop fields throughout North America. Although corn and soybean are grown in landscapes that are often highly disturbed, these data suggest that a community of pollinators can persist within them. We suggest approaches to conserving this community based on partnering with activities that aim to lessen the environmental impact of annual crop production. © The Authors 2016. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Safety assessment and public concerns for genetically modified food products: the Japanese experience.

PubMed

Hino, Akihiro

2002-01-01

The recombinant DNA (rDNA) technique is expected to bring about great progress in the improvement of breeding technology and the development of new plant varieties showing high quality and high yield, such as those with excellent pest and disease resistance, those with environmental stress tolerance, and so forth. In the United States and Canada, many genetically modified (GM) crop plants were commercialized as early as 1994. In Japan, 35 transgenic crop plants, such as herbicide tolerant soybean, cotton, and canola, and insect-resistant corn, cotton, and potatos, were authorized and considered marketable until April 2001. The general public, however, is not familiar with rDNA technology, and some people seem to feel uncomfortable with biotechnology, frequently because of the difficulty of the technology and lacking of sufficient information. New labeling systems were initiated in April 2001 in Japan to provide information regarding the use of GM crops as raw material.

An ultrasensitive label-free electrochemiluminescent immunosensor for measuring Cry1Ab level and genetically modified crops content.

PubMed

Gao, Hongfei; Wen, Luke; Wu, Yuhua; Fu, Zhifeng; Wu, Gang

2017-11-15

The development of genetically modified (GM) insect-resistant crops has aroused great public concern about the risks on the eco-environment resulting from a release of toxic Cry proteins (such as Cry1Ab) to the soil. Therefore, it is of crucial importance to measure the Cry proteins level and the GM crops content. Here, we have tested for the first time a method that uses novel carbon nanospheres (CNPs) label-free electrochemiluminescent (ECL) immunosensor for the ultrasensitive quantification of Cry1Ab and GM crops. In this work, novel CNPs were prepared from printer toner with a very facile approach, and linked with anti-Cry1Ab antibodies to modify a golden working electrode. The immunoreaction between Cry1Ab and its antibody formed an immunocomplex on the bioreceptor region of the sensor, which inhibited electron transfer between the electrode surface and the ECL substance, leading to a decrease of ECL response. Under the optimal conditions, the fabricated label-free ECL immunosensor determined Cry1Ab down to 3.0pgmL -1 within a linear range of 0.010-1.0ngmL -1 , showing significant improvement of sensitivity than that of most previous reports. Meanwhile, the proposed method was successfully applied for GM rice BT63 and GM maize MON810 detections down to 0.010% and 0.020%, respectively. Due to its outstanding advantages such as high sensitivity, ideal selectivity, simple fabrication, rapid detection, and low cost, the developed method can be considered as a powerful and pioneering tool for GM crops detection. Its use can also be extended to other toxin protein sensing in foods. Copyright © 2017. Published by Elsevier B.V.

Overview and highlights of Early Warning and Crop Condition Assessment project

NASA Technical Reports Server (NTRS)

Boatwright, G. O.; Whitehead, V. S.

1985-01-01

Work of the Early Warning and Crop Condition Assessment (EW/CCA) project, one of eight projects in the Agriculture and Resources Inventory Surveys Through Aerospace Remote Sensing (AgRISTARS), is reviewed. Its mission, to develop and test remote sensing techniques that enhance operational methodologies for crop condition assessment, was in response to initiatives issued by the Secretary of Agriculture. Meteorologically driven crop stress indicator models have been developed or modified for wheat, maize, grain sorghum, and soybeans. These models provide early warning alerts of potential or actual crop stresses due to water deficits, adverse temperatures, and water excess that could delay planting or harvesting operations. Recommendations are given for future research involving vegetative index numbers and the NOAA and Landsat satellites.

The use of life-cycle assessment to evaluate the environmental impacts of growing genetically modified, nitrogen use-efficient canola.

PubMed

Strange, Alison; Park, Julian; Bennett, Richard; Phipps, Richard

2008-05-01

Agriculture, particularly intensive crop production, makes a significant contribution to environmental pollution. A variety of canola (Brassica napus) has been genetically modified to enhance nitrogen use efficiency, effectively reducing the amount of fertilizer required for crop production. A partial life-cycle assessment adapted to crop production was used to assess the potential environmental impacts of growing genetically modified, nitrogen use-efficient (GMNUE) canola in North Dakota and Minnesota compared with a conventionally bred control variety. The analysis took into account the entire production system used to produce 1 tonne of canola. This comprised raw material extraction, processing and transportation, as well as all agricultural field operations. All emissions associated with the production of 1 tonne of canola were listed, aggregated and weighted in order to calculate the level of environmental impact. The findings show that there are a range of potential environmental benefits associated with growing GMNUE canola. These include reduced impacts on global warming, freshwater ecotoxicity, eutrophication and acidification. Given the large areas of canola grown in North America and, in particular, Canada, as well as the wide acceptance of genetically modified varieties in this area, there is the potential for GMNUE canola to reduce pollution from agriculture, with the largest reductions predicted to be in greenhouse gases and diffuse water pollution.

The Role of Public Opinion in Shaping Trajectories of Agricultural Biotechnology.

PubMed

Malyska, Aleksandra; Bolla, Robert; Twardowski, Tomasz

2016-07-01

Science and technology are not autonomous entities and research trajectories are largely influenced by public opinion. The role of political decisions becomes especially evident in light of rapidly developing new breeding techniques (NBTs) and other genome editing methods for crop improvement. Decisions on how those new techniques should be regulated may not be based entirely on scientific rationale, and even if it is decided that crops produced by NBTs do not fall under the umbrella of genetically modified organisms (GMOs), their commercialization is by no means certain at this time. If and when adopted regulations do not comply with the public's perception of risks, policy makers will find themselves under pressure to ban or restrict the use of the respective products. Copyright © 2016 Elsevier Ltd. All rights reserved.

Development of an Improved Irrigation Subroutine in SWAT to Simulate the Hydrology of Rice Paddy Grown under Submerged Conditions

NASA Astrophysics Data System (ADS)

Muraleedharan, B. V.; Kathirvel, K.; Narasimhan, B.; Nallasamy, N. D.

2014-12-01

Soil Water Assessment Tool (SWAT) is a basin scale, distributed hydrological model commonly used to predict the effect of management decisions on the hydrologic response of watersheds. Hydrologic response is decided by the various components of water balance. In the case of watersheds located in south India as well as in several other tropical countries around the world, paddy is one of the dominant crop controlling the hydrologic response of a watershed. Hence, the suitability of SWAT in replicating the hydrology of paddy fields needs to be verified. Rice paddy fields are subjected to flooding method of irrigation, while the irrigation subroutines in SWAT are developed to simulate crops grown under non flooding conditions. Moreover irrigation is represented well in field scale models, while it is poorly represented within watershed models like SWAT. Reliable simulation of flooding method of irrigation and hydrology of the fields will assist in effective water resources management of rice paddy fields which are one of the major consumers of surface and ground water resources. The current study attempts to modify the irrigation subroutine in SWAT so as to simulate flooded irrigation condition. A field water balance study was conducted on representative fields located within Gadana, a subbasin located in Tamil Nadu (southern part of India) and dominated by rice paddy based irrigation systems. The water balance of irrigated paddy fields simulated with SWAT was compared with the water balance derived by rice paddy based crop growth model named ORYZA. The variation in water levels along with the soil moisture variation predicted by SWAT was evaluated with respect to the estimates derived from ORYZA. The water levels were further validated with field based water balance measurements taken on a daily scale. It was observed that the modified irrigation subroutine was able to simulate irrigation of rice paddy within SWAT in a realistic way compared to the existing method.

[Genetically modified food (food derived from biotechnology): current and future trends in public acceptance and safety assessment].

PubMed

Nishiura, Hiroshi; Imai, Hirohisa; Nakao, Hiroyuki; Tsukino, Hiromasa; Kuroda, Yoshiki; Katoh, Takahiko

2002-11-01

Current and future trends regarding genetically modified (GM) crops and food stuffs were reviewed, with a particular focus on public acceptance and safety assessment. While GM foods, foods derived from biotechnology, are popular with growers and producers, they are still a matter of some concern among consumers. In fact, our recent surveys showed that Japanese consumers had become uneasy about the potential health risks of genetically modified foods. Many Japanese consumers have only vague ideas about the actual health risks, and they appear to be making decisions simply by rejecting GM food because of non-informed doubts. Although the debate about GM foods has increased in the mass media and scientific journals, few articles concerning direct studies on the potential toxicity or adverse health effects of GM foods have appeared. The roles of relevant international regulatory bodies in ensuring that GM crops and food are safe are therefore have summarized. Finally, the current debate on use of GM crops in agriculture and future trends for development of GM foods with enriched nutrients, better functionality, and medicinal ingredients, which will be of direct benefit to the consumer, are covered.

Coexistence or Conflict? A European Perspective on GMOs and the Problem of Liability

ERIC Educational Resources Information Center

Rodgers, Christopher P.

2007-01-01

In March 2004, the U.K. government announced its intention to grant limited authorization for the growing of commercial genetically modified (GM) crops. This article reviews the potential liabilities that may arise from GM cropping, for environmental damage and for economic losses claimed by non-GM producers. It considers the application of the…

ENVIRONMENTAL IMPLICATIONS OF PLANTS MODIFIED TO CONTAIN INSECTICIDAL GENES

EPA Science Inventory

Genetically modified (GM) crops are being grown on large acreages in the United States. Before being approved for sale, sufficient scientific evidence allowed the EPA to determine that they are safe. The results of this research project will strengthen the scientific basis EPA u...

Global Adoption of Genetically Modified (GM) Crops: Challenges for the Public Sector.

PubMed

Huesing, Joseph E; Andres, David; Braverman, Michael P; Burns, Andrea; Felsot, Allan S; Harrigan, George G; Hellmich, Richard L; Reynolds, Alan; Shelton, Anthony M; Jansen van Rijssen, Wilna; Morris, E Jane; Eloff, Jacobus N

2016-01-20

Advances in biotechnology continue to drive the development of a wide range of insect-protected, herbicide-tolerant, stress-tolerant, and nutritionally enhanced genetically modified (GM) crops, yet societal and public policy considerations may slow their commercialization. Such restrictions may disproportionately affect developing countries, as well as smaller entrepreneurial and public sector initiatives. The 2014 IUPAC International Congress of Pesticide Chemistry (San Francisco, CA, USA; August 2014) included a symposium on "Challenges Associated with Global Adoption of Agricultural Biotechnology" to review current obstacles in promoting GM crops. Challenges identified by symposium presenters included (i) poor public understanding of GM technology and the need for enhanced communication strategies, (ii) nonharmonized and prescriptive regulatory requirements, and (iii) limited experience with regulations and product development within some public sector programs. The need for holistic resistance management programs to enable the most effective use of insect-protected crops was also a point of emphasis. This paper provides details on the symposium discussion and provides background information that can be used in support of further adoption of beneficial GM crops. Overall, it emphasizes that global adoption of modern agricultural biotechnology has not only provided benefits to growers and consumers but has great potential to provide solutions to an increasing global population and diminishing agricultural land. This potential will be realized by continued scientific innovation, harmonized regulatory systems, and broader communication of the benefits of the high-yielding, disease-resistant, and nutritionally enhanced crops attainable through modern biotechnology.

Trends in pesticide use on soybean, corn and cotton since the introduction of major genetically modified crops in the United States.

PubMed

Coupe, Richard H; Capel, Paul D

2016-05-01

Genetically modified (GM) varieties of soybean, corn and cotton have largely replaced conventional varieties in the United States. The most widely used applications of GM technology have been the development of crops that are resistant to a specific broad-spectrum herbicide (primarily glyphosate) or that produce insecticidal compounds within the plant itself. With the widespread adoption of GM crops, a decline in the use of conventional pesticides was expected. There has been a reduction in the annual herbicide application rate to corn since the advent of GM crops, but the herbicide application rate is mostly unchanged for cotton. Herbicide use on soybean has increased. There has been a substantial reduction in the amount of insecticides used on both corn and cotton since the introduction of GM crops. The observed changes in pesticide use are likely to be the result of many factors, including the introduction of GM crops, regulatory restrictions on some conventional pesticides, introduction of new pesticide technologies and changes in farming practices. In order to help protect human and environmental health and to help agriculture plan for the future, more detailed and complete documentation on pesticide use is needed on a frequent and ongoing basis. Published 2015. This article is a U.S. Government work and is in the public domain in the USA. Published 2015. This article is a U.S. Government work and is in the public domain in the USA.

Global income and production impacts of using GM crop technology 1996–2014

PubMed Central

Brookes, Graham; Barfoot, Peter

2016-01-01

ABSTRACT This paper provides an economic assessment of the value of using genetically modified (GM) crop technology in agriculture at the farm level. It follows and updates earlier annual studies which examined economic impacts on yields, key costs of production, direct farm income and effects, and impacts on the production base of the 4 main crops of soybeans, corn, cotton and canola. The commercialisation of GM crops has continued to occur at a rapid rate since the mid 1990s, with important changes in both the overall level of adoption and impact occurring in 2014. This annual updated analysis shows that there continues to be very significant net economic benefits at the farm level amounting to $17.7 billion in 2014 and $150.3 billion for the 19-year period 1996–2014 (in nominal terms). These economic gains have been divided roughly 50% each to farmers in developed and developing countries. About 65% of the gains have derived from yield and production gains with the remaining 35% coming from cost savings. The technology has also made important contributions to increasing global production levels of the 4 main crops, having, for example, added 158 million tonnes and 322 million tonnes respectively, to the global production of soybeans and maize since the introduction of the technology in the mid 1990s. PMID:27116697

Farm income and production impacts of using GM crop technology 1996–2015

PubMed Central

Brookes, Graham

2017-01-01

ABSTRACT This paper provides an assessment of the value of using genetically modified (GM) crop technology in agriculture at the farm level. It follows and updates earlier annual studies which examined impacts on yields, key variable costs of production, direct farm (gross) income and impacts on the production base of the 4 main crops of soybeans, corn, cotton and canola. The commercialisation of GM crops has occurred at a rapid rate since the mid 1990s, with important changes in both the overall level of adoption and impact occurring in 2015. This annual updated analysis shows that there continues to be very significant net economic benefits at the farm level amounting to $15.4 billion in 2015 and $167.8 billion for the 20 year period 1996–2015 (in nominal terms). These gains have been divided 49% to farmers in developed countries and 51% to farmers in developing countries. About 72% of the gains have derived from yield and production gains with the remaining 28% coming from cost savings. The technology has also made important contributions to increasing global production levels of the 4 main crops, having, for example, added 180 million tonnes and 358 million tonnes respectively, to the global production of soybeans and maize since the introduction of the technology in the mid 1990s. PMID:28481684

Global income and production impacts of using GM crop technology 1996-2014.

PubMed

Brookes, Graham; Barfoot, Peter

2016-01-02

This paper provides an economic assessment of the value of using genetically modified (GM) crop technology in agriculture at the farm level. It follows and updates earlier annual studies which examined economic impacts on yields, key costs of production, direct farm income and effects, and impacts on the production base of the 4 main crops of soybeans, corn, cotton and canola. The commercialisation of GM crops has continued to occur at a rapid rate since the mid 1990s, with important changes in both the overall level of adoption and impact occurring in 2014. This annual updated analysis shows that there continues to be very significant net economic benefits at the farm level amounting to $17.7 billion in 2014 and $150.3 billion for the 19-year period 1996-2014 (in nominal terms). These economic gains have been divided roughly 50% each to farmers in developed and developing countries. About 65% of the gains have derived from yield and production gains with the remaining 35% coming from cost savings. The technology has also made important contributions to increasing global production levels of the 4 main crops, having, for example, added 158 million tonnes and 322 million tonnes respectively, to the global production of soybeans and maize since the introduction of the technology in the mid 1990s.

Characteristics and safety assessment of intractable proteins in genetically modified crops.

PubMed

Bushey, Dean F; Bannon, Gary A; Delaney, Bryan F; Graser, Gerson; Hefford, Mary; Jiang, Xiaoxu; Lee, Thomas C; Madduri, Krishna M; Pariza, Michael; Privalle, Laura S; Ranjan, Rakesh; Saab-Rincon, Gloria; Schafer, Barry W; Thelen, Jay J; Zhang, John X Q; Harper, Marc S

2014-07-01

Genetically modified (GM) crops may contain newly expressed proteins that are described as "intractable". Safety assessment of these proteins may require some adaptations to the current assessment procedures. Intractable proteins are defined here as those proteins with properties that make it extremely difficult or impossible with current methods to express in heterologous systems; isolate, purify, or concentrate; quantify (due to low levels); demonstrate biological activity; or prove equivalency with plant proteins. Five classes of intractable proteins are discussed here: (1) membrane proteins, (2) signaling proteins, (3) transcription factors, (4) N-glycosylated proteins, and (5) resistance proteins (R-proteins, plant pathogen recognition proteins that activate innate immune responses). While the basic tiered weight-of-evidence approach for assessing the safety of GM crops proposed by the International Life Sciences Institute (ILSI) in 2008 is applicable to intractable proteins, new or modified methods may be required. For example, the first two steps in Tier I (hazard identification) analysis, gathering of applicable history of safe use (HOSU) information and bioinformatics analysis, do not require protein isolation. The extremely low level of expression of most intractable proteins should be taken into account while assessing safety of the intractable protein in GM crops. If Tier II (hazard characterization) analyses requiring animal feeding are judged to be necessary, alternatives to feeding high doses of pure protein may be needed. These alternatives are discussed here. Copyright © 2014 The Authors. Published by Elsevier Inc. All rights reserved.

Altered pesticide use on transgenic crops and the associated general impact from an environmental perspective.

PubMed

Kleter, Gijs A; Bhula, Raj; Bodnaruk, Kevin; Carazo, Elizabeth; Felsot, Allan S; Harris, Caroline A; Katayama, Arata; Kuiper, Harry A; Racke, Kenneth D; Rubin, Baruch; Shevah, Yehuda; Stephenson, Gerald R; Tanaka, Keiji; Unsworth, John; Wauchope, R Donald; Wong, Sue-Sun

2007-11-01

The large-scale commercial cultivation of transgenic crops has undergone a steady increase since their introduction 10 years ago. Most of these crops bear introduced traits that are of agronomic importance, such as herbicide or insect resistance. These traits are likely to impact upon the use of pesticides on these crops, as well as the pesticide market as a whole. Organizations like USDA-ERS and NCFAP monitor the changes in crop pest management associated with the adoption of transgenic crops. As part of an IUPAC project on this topic, recent data are reviewed regarding the alterations in pesticide use that have been observed in practice. Most results indicate a decrease in the amounts of active ingredients applied to transgenic crops compared with conventional crops. In addition, a generic environmental indicator -- the environmental impact quotient (EIQ) -- has been applied by these authors and others to estimate the environmental consequences of the altered pesticide use on transgenic crops. The results show that the predicted environmental impact decreases in transgenic crops. With the advent of new types of agronomic trait and crops that have been genetically modified, it is useful to take also their potential environmental impacts into account.

Resistance Management Monitoring for the US Corn Crop to the Illinois Corn Growers Association

EPA Science Inventory

Significant increases in genetically modified corn planting are expected for future planted acreages approaching 80% of total corn plantings anticipated by 2009. As demand increases, incidence of farmer non-compliance with mandated non-genetically modified refuge is likely to in...

TRACKING GENE FLOW FROM A GENETICALLY MODIFIED CREEPING BENTGRASS -- METHODS, MEASURES AND LESSONS LEARNED

EPA Science Inventory

Creeping bentgrass (CBG) expressing an engineered gene for resistance to glyphosate herbicide is one of the first genetically modified (GM) perennial crops to undergo regulatory review for commercial release by the US Department of Agriculture Animal Plant Health and Inspection S...

Development and Interlaboratory Validation of a Simple Screening Method for Genetically Modified Maize Using a ΔΔC(q)-Based Multiplex Real-Time PCR Assay.

PubMed

Noguchi, Akio; Nakamura, Kosuke; Sakata, Kozue; Sato-Fukuda, Nozomi; Ishigaki, Takumi; Mano, Junichi; Takabatake, Reona; Kitta, Kazumi; Teshima, Reiko; Kondo, Kazunari; Nishimaki-Mogami, Tomoko

2016-04-19

A number of genetically modified (GM) maize events have been developed and approved worldwide for commercial cultivation. A screening method is needed to monitor GM maize approved for commercialization in countries that mandate the labeling of foods containing a specified threshold level of GM crops. In Japan, a screening method has been implemented to monitor approved GM maize since 2001. However, the screening method currently used in Japan is time-consuming and requires generation of a calibration curve and experimental conversion factor (C(f)) value. We developed a simple screening method that avoids the need for a calibration curve and C(f) value. In this method, ΔC(q) values between the target sequences and the endogenous gene are calculated using multiplex real-time PCR, and the ΔΔC(q) value between the analytical and control samples is used as the criterion for determining analytical samples in which the GM organism content is below the threshold level for labeling of GM crops. An interlaboratory study indicated that the method is applicable independently with at least two models of PCR instruments used in this study.

Considerations in miniaturizing simplified agro-ecosystems for advanced life support

NASA Technical Reports Server (NTRS)

Volk, T.

1996-01-01

Miniaturizing the Earth's biogeochemical cycles to support human life during future space missions is the goal of the NASA research and engineering program in advanced life support. Mission requirements to reduce mass, volume, and power have focused efforts on (1) a maximally simplified agro-ecosystem of humans, food crops, and microbes; and, (2) a design for optimized productivity of food crops with high light levels over long days, with hydroponics, with elevated carbon dioxide and other controlled environmental factors, as well as with genetic selection for desirable crop properties. Mathematical modeling contributes to the goals by establishing trade-offs, by analyzing the growth and development of experimental crops, and by pointing to the possibilities of directed phasic control using modified field crop models to increase the harvest index.

Considerations in miniaturizing simplified agro-ecosystems for advanced life support.

PubMed

Volk, T

1996-01-01

Miniaturizing the Earth's biogeochemical cycles to support human life during future space missions is the goal of the NASA research and engineering program in advanced life support. Mission requirements to reduce mass, volume, and power have focused efforts on (1) a maximally simplified agro-ecosystem of humans, food crops, and microbes; and, (2) a design for optimized productivity of food crops with high light levels over long days, with hydroponics, with elevated carbon dioxide and other controlled environmental factors, as well as with genetic selection for desirable crop properties. Mathematical modeling contributes to the goals by establishing trade-offs, by analyzing the growth and development of experimental crops, and by pointing to the possibilities of directed phasic control using modified field crop models to increase the harvest index.

Yield Model Development (YMD) implementation plan for fiscal years 1981 and 1982

NASA Technical Reports Server (NTRS)

Ambroziak, R. A. (Principal Investigator)

1981-01-01

A plan is described for supporting USDA crop production forecasting and estimation by (1) testing, evaluating, and selecting crop yield models for application testing; (2) identifying areas of feasible research for improvement of models; and (3) conducting research to modify existing models and to develop new crop yield assessment methods. Tasks to be performed for each of these efforts are described as well as for project management and support. The responsibilities of USDA, USDC, USDI, and NASA are delineated as well as problem areas to be addressed.

What determines the acceptability of genetically modified food that can improve human nutrition?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Purchase, Iain F.H.

It has been predicted that by 2025 there will be an annual shortfall of cereals for feeding the human population of 68.5 million tonnes. One possible solution is the use of genetically modified (GM) crops, which are already grown extensively (59 million ha of GM crops were planted in 2002) in the USA, South America, Africa and China. Nevertheless, there is considerable disagreement about the advisability of using such crops, particularly in Europe. Obviously, the safety of the food derived from the GM crops is a primary consideration. Safety assessment relies on establishing that the food is substantially equivalent tomore » its non-GM counterpart and specific testing for allergenicity of proteins and toxicity of metabolites and the whole food. There appears to be international agreement on the principles of safety assessment. Safety to the environment is equally important, but will not be covered in this presentation. The public's perception of the risk of new technology is critical to its acceptance. Perception of risk, in turn, depends on the credibility of the source of the information and trust in the regulatory process. In many countries, the public appears to have lost its trust in the scientists and government dealing with GM food, making the acceptability of GM crops uncertain. Of equal importance are the socio-economic factors that impinge on the viability of GM produce. These include intellectual property protection, trade liberalisation (through subsidy and tariff barriers in developed countries) and the intensity of bio safety regulations. The socio-economic interests of developed and developing countries may diverge and may even be contradictory in any one country. Acceptance of GM crops will thus depend on detailed issues surrounding particular crops and economies.« less

What determines the acceptability of genetically modified food that can improve human nutrition?

PubMed

Purchase, Iain F H

2005-09-01

It has been predicted that by 2025 there will be an annual shortfall of cereals for feeding the human population of 68.5 million tones. One possible solution is the use of genetically modified (GM) crops, which are already grown extensively (59 million ha of GM crops were planted in 2002) in the USA, South America, Africa and China. Nevertheless, there is considerable disagreement about the advisability of using such crops, particularly in Europe. Obviously, the safety of the food derived from the GM crops is a primary consideration. Safety assessment relies on establishing that the food is substantially equivalent to its non-GM counterpart and specific testing for allergenicity of proteins and toxicity of metabolites and the whole food. There appears to be international agreement on the principles of safety assessment. Safety to the environment is equally important, but will not be covered in this presentation. The public's perception of the risk of new technology is critical to its acceptance. Perception of risk, in turn, depends on the credibility of the source of the information and trust in the regulatory process. In many countries, the public appears to have lost its trust in the scientists and government dealing with GM food, making the acceptability of GM crops uncertain. Of equal importance are the socio-economic factors that impinge on the viability of GM produce. These include intellectual property protection, trade liberalization (through subsidy and tariff barriers in developed countries) and the intensity of bio safety regulations. The socio-economic interests of developed and developing countries may diverge and may even be contradictory in any one country. Acceptance of GM crops will thus depend on detailed issues surrounding particular crops and economies.

Impact of Cropping Systems, Soil Inoculum, and Plant Species Identity on Soil Bacterial Community Structure.

PubMed

Ishaq, Suzanne L; Johnson, Stephen P; Miller, Zach J; Lehnhoff, Erik A; Olivo, Sarah; Yeoman, Carl J; Menalled, Fabian D

2017-02-01

Farming practices affect the soil microbial community, which in turn impacts crop growth and crop-weed interactions. This study assessed the modification of soil bacterial community structure by organic or conventional cropping systems, weed species identity [Amaranthus retroflexus L. (redroot pigweed) or Avena fatua L. (wild oat)], and living or sterilized inoculum. Soil from eight paired USDA-certified organic and conventional farms in north-central Montana was used as living or autoclave-sterilized inoculant into steam-pasteurized potting soil, planted with Am. retroflexus or Av. fatua and grown for two consecutive 8-week periods to condition soil nutrients and biota. Subsequently, the V3-V4 regions of the microbial 16S rRNA gene were sequenced by Illumina MiSeq. Treatments clustered significantly, with living or sterilized inoculum being the strongest delineating factor, followed by organic or conventional cropping system, then individual farm. Living inoculum-treated soil had greater species richness and was more diverse than sterile inoculum-treated soil (observed OTUs, Chao, inverse Simpson, Shannon, P < 0.001) and had more discriminant taxa delineating groups (linear discriminant analysis). Living inoculum soil contained more Chloroflexi and Acidobacteria, while the sterile inoculum soil had more Bacteroidetes, Firmicutes, Gemmatimonadetes, and Verrucomicrobia. Organically farmed inoculum-treated soil had greater species richness, more diversity (observed OTUs, Chao, Shannon, P < 0.05), and more discriminant taxa than conventionally farmed inoculum-treated soil. Cyanobacteria were higher in pots growing Am. retroflexus, regardless of inoculum type, for three of the four organic farms. Results highlight the potential of cropping systems and species identity to modify soil bacterial communities, subsequently modifying plant growth and crop-weed competition.

Future Climate Impacts on Crop Water Demand and Groundwater Longevity in Agricultural Regions

NASA Astrophysics Data System (ADS)

Russo, T. A.; Sahoo, S.; Elliott, J. W.; Foster, I.

2016-12-01

Improving groundwater management practices under future drought conditions in agricultural regions requires three steps: 1) estimating the impacts of climate and drought on crop water demand, 2) projecting groundwater availability given climate and demand forcing, and 3) using this information to develop climate-smart policy and water use practices. We present an innovative combination of models to address the first two steps, and inform the third. Crop water demand was simulated using biophysical crop models forced by multiple climate models and climate scenarios, with one case simulating climate adaptation (e.g. modify planting or harvest time) and another without adaptation. These scenarios were intended to represent a range of drought projections and farm management responses. Nexty, we used projected climate conditions and simulated water demand across the United States as inputs to a novel machine learning-based groundwater model. The model was applied to major agricultural regions relying on the High Plains and Mississippi Alluvial aquifer systems in the US. The groundwater model integrates input data preprocessed using single spectrum analysis, mutual information, and a genetic algorithm, with an artificial neural network model. Model calibration and test results indicate low errors over the 33 year model run, and strong correlations to groundwater levels in hundreds of wells across each aquifer. Model results include a range of projected groundwater level changes from the present to 2050, and in some regions, identification and timeframe of aquifer depletion. These results quantify aquifer longevity under climate and crop scenarios, and provide decision makers with the data needed to compare scenarios of crop water demand, crop yield, and groundwater response, as they aim to balance water sustainability with food security.

The impact of modifying antenna size of photosystem II on canopy photosynthetic efficiency – development of a new canopy photosynthesis model scaling from metabolism to canopy level processes

USDA-ARS?s Scientific Manuscript database

Canopy photosynthesis describes photosynthesis of an entire crop field and positively correlates with biomass production. Much effort in crop breeding has focused on improving canopy architecture and hence light distribution inside the canopy. Here, we develop a new integrated canopy photosynthesis ...

Uninformed and disinformed society and the GMO market.

PubMed

Twardowski, Tomasz; Małyska, Aleksandra

2015-01-01

The EU has a complicated regulatory framework, and this is slowing down the approval process of new genetically modified (GM) crops. Currently, labeling of GM organisms (GMOs) is mandatory in all Member States. However, the USA, in which GMO labeling is not mandatory, continues to lead the production of biotech crops, biopharmaceuticals, biomaterials, and bioenergy. Copyright © 2014 Elsevier Ltd. All rights reserved.

A risk-based classification scheme for genetically modified foods. I: Conceptual development.

PubMed

Chao, Eunice; Krewski, Daniel

2008-12-01

The predominant paradigm for the premarket assessment of genetically modified (GM) foods reflects heightened public concern by focusing on foods modified by recombinant deoxyribonucleic acid (rDNA) techniques, while foods modified by other methods of genetic modification are generally not assessed for safety. To determine whether a GM product requires less or more regulatory oversight and testing, we developed and evaluated a risk-based classification scheme (RBCS) for crop-derived GM foods. The results of this research are presented in three papers. This paper describes the conceptual development of the proposed RBCS that focuses on two categories of adverse health effects: (1) toxic and antinutritional effects, and (2) allergenic effects. The factors that may affect the level of potential health risks of GM foods are identified. For each factor identified, criteria for differentiating health risk potential are developed. The extent to which a GM food satisfies applicable criteria for each factor is rated separately. A concern level for each category of health effects is then determined by aggregating the ratings for the factors using predetermined aggregation rules. An overview of the proposed scheme is presented, as well as the application of the scheme to a hypothetical GM food.

The socioeconomics of genetically modified biofortified crops: a systematic review and meta-analysis.

PubMed

De Steur, Hans; Wesana, Joshua; Blancquaert, Dieter; Van Der Straeten, Dominique; Gellynck, Xavier

2017-02-01

Building upon the growing interest and research on genetically modified (GM) biofortification, its socioeconomic potential has been increasingly examined. We conducted two systematic reviews and meta-analyses to provide comprehensive evidence of consumers' willingness to pay (11 economic valuation studies, 64 estimates) and cost-effectiveness/benefits (five economic evaluation studies, 30 estimates). Worldwide, consumers were willing to pay 23.9% more for GM biofortified food crops. Aside from crop and design-related differences, information provision was deemed crucial. Positive information (nutrition and GM benefits) is associated with the highest consumer willingness to pay, compared with negative, objective, and conflicting GM information, especially when negative information was mentioned last. This health intervention would reduce the aggregated micronutrient deficiency burden in Asia (15.6 million disability-adjusted life years (DALYs)) by 12.5-51.4%, at a low cost of USD 7.9-27.8 per DALY in a pessimistic and optimistic scenario, respectively. Given that GM biofortified crops could tackle hidden hunger in a cost-effective and well-accepted way, its implementation is worth pursuing. A case study on folate biofortification further elaborates on the importance of socioeconomic research and the determinants of their market potential. © 2016 New York Academy of Sciences.

Quick-Reaction Report on Modifying C-26 Aircraft for Counterdrug Missions

DTIC Science & Technology

1994-03-23

National Guard was modifying 76 OH-58 helicopters with thermal imagery system sensors to identify indoor marijuana crops, drug processing laboratories, or...interdiction of aircraft crossing the U.S./Mexican border and detection of marijuana growing areas. The Director, ANG, decided that the C-26, a medium-size

Genetic basis and detection of unintended effects in genetically modified crop plants

USDA-ARS?s Scientific Manuscript database

In January 2014, an international meeting sponsored by the International Life Sciences Institute/Health and Environmental Sciences Institute and the Canadian Food Inspection Agency titled “Genetic Basis of Unintended Effects in Modified Plants” was held in Ottawa, Canada, bringing together over 75 s...

Use of spectral imaging for insect resistance monitoring: EPA research on stewardship of Bt crops

EPA Science Inventory

A significant increase in genetically modified corn planting driven by biofuel demand is expected for future growing seasons. As demand increases, incidence of farmer non-compliance with mandated non-genetically modified refuge is likely to increase. As part of the FIFRA regist...

Mechanical Stimulation Controls Canopy Architecture and Improves Volume Utilization Efficiency in Bioregenerative Life-Support Candidate Crops

NASA Technical Reports Server (NTRS)

Graham, Thomas; Wheeler, Raymond

2017-01-01

Thigmomorphogenesis can be utilized to improve volume utilization efficiency in peppers (Capsicum annum cv. California Wonder), a candidate crop for fresh food production in space. The effect occurred primarily through a reduction in average plant height. Reductions in vegetative growth metrics during the juvenile growth phase (growth leading up to and including early anthesis) were not observed during the mature or fruiting phase, with the notable exception of reduced plant height. Early flower production and fruit set was reduced under MS; however, the total edible biomass was not reduced, with MS plants producing fewer but larger fruits. The overall reduction in plant height due to MS (Mechanical Stimulation) was sufficient to realize theoretical improvements in VUE (Volume Use Efficiency) for large vertical farming systems. The reduced heights observed could improve VUE in single tier spaceflight hardware (e.g., Veggie; Massa 2016 (this issue)) in that crops that would not normally fit in these spaceflight systems may be accommodated if MS can be applied. Although the potential for using MS to induce thigmomorphogenic phenotypes has long been appreciated, it is only recently that the growth systems themselves could take advantage of the modified crop architecture associated with MS. It is with this in mind that renewed attention should be given to developing procedures for environmentally modifying crops for spaceflight applications.

Genetically Modified Organisms and the Future Global Nutrient Supply: Part of the Solution or a New Problem?

PubMed

Phillips, Peter W B

2016-01-01

For almost a generation now, scientists and policy makers have enthusiastically advanced genetically modified (GM) crops as a solution to both global food security and, specifically, the micronutrient needs of the hidden hungry. While genetic modification offers the prospect of overcoming technological barriers to food security, the gap between the vision and reality remains large. This chapter examines the impact of GM crops at three levels. Undoubtedly, at the micro level, bio-fortification offers a real opportunity to enhance the availability of micronutrients. However, the inexorable 'research sieve' ruthlessly culls most technical candidates in the agri-food system. GM bio-fortified foods, such as Golden RiceTM, remain only a promise. At the meso level, GM crops have generated benefits for both producers and consumers who have adopted GM crops, but given that the technology has been differentially applied to maize, the average diet for the food insecure has become somewhat less balanced. Finally, while GM crops have increased yields and the global food supply, these have come at the cost of more complex and costly trade and market systems, which impair access and availability. In essence, while biotechnology offers some tantalizing technological prospects, the difficulties of getting the corresponding benefits to the most needy have dampened some of the enthusiasm. © 2016 S. Karger AG, Basel.

Regulatory science requirements of labeling of genetically modified food.

PubMed

Moghissi, A Alan; Jaeger, Lisa M; Shafei, Dania; Bloom, Lindsey L

2018-05-01

This paper provides an overview of the evolution of food labeling in the USA. It briefly describes the three phases of agricultural development consisting of naturally occurring, cross-bred, and genetically engineered, edited or modified crops, otherwise known as Genetically Modified Organisms (GMO). It uses the Best Available Regulatory Science (BARS) and Metrics for Evaluation of Regulatory Science Claims (MERSC) to evaluate the scientific validity of claims applicable to GMO and the Best Available Public Information (BAPI) to evaluate the pronouncements by public media and others. Subsequently claims on health risk, ecological risk, consumer choice, and corporate greed are evaluated based on BARS/MERSC and BAPI. The paper concludes by suggesting that labeling of food containing GMO should consider the consumer's choice, such as the food used by those who desire kosher and halal food. Furthermore, the consumer choice is already met by the exclusion of GMO in organic food.

[Supervision of foods containing components of genetically modified organisms and the problems of labeling this type of products].

PubMed

Onishchenko, G G

2010-01-01

Commercial production of genetically modified (GM) crops as food or feed is regarded as a promising social area in the development of modern biotechnology. The Russian Federation has set up a governmental system to regulate the use of biotechnology products, which is based on Russian and foreign experience and the most up-to-date scientific approaches. The system for evaluating the quality and safety of GM foodstuffs envisages the postregistration monitoring of their circulation as an obligatory stage. For these purposes, the world community applies two methods: enzyme immunoassay and polymerase chain reaction. It should be noted that there are various approaches to GM food labeling in the world; this raises the question of whether the labeling of foods that are prepared from genetically modified organisms, but contain no protein or DNA is to be introduced in Russia, as in the European Union.

Deforestation impacts on soil organic carbon stocks in the Semiarid Chaco Region, Argentina.

PubMed

Villarino, Sebastián Horacio; Studdert, Guillermo Alberto; Baldassini, Pablo; Cendoya, María Gabriela; Ciuffoli, Lucía; Mastrángelo, Matias; Piñeiro, Gervasio

2017-01-01

Land use change affects soil organic carbon (SOC) and generates CO 2 emissions. Moreover, SOC depletion entails degradation of soil functions that support ecosystem services. Large areas covered by dry forests have been cleared in the Semiarid Chaco Region of Argentina for cropping expansion. However, deforestation impacts on the SOC stock and its distribution in the soil profile have been scarcely reported. We assessed these impacts based on the analysis of field data along a time-since-deforestation-for-cropping chronosequence, and remote sensing indices. Soil organic C was determined up to 100cm depth and physically fractionated into mineral associated organic carbon (MAOC) and particulate organic C (POC). Models describing vertical distribution of SOC were fitted. Total SOC, POC and MAOC stocks decreased markedly with increasing cropping age. Particulate organic C was the most sensitive fraction to cultivation. After 10yr of cropping SOC loss was around 30%, with greater POC loss (near 60%) and smaller MAOC loss (near 15%), at 0-30cm depth. Similar relative SOC losses were observed in deeper soil layers (30-60 and 60-100cm). Deforestation and subsequent cropping also modified SOC vertical distribution. Soil organic C loss was negatively associated with the proportion of maize in the rotation and total crop biomass inputs, but positively associated with the proportion of soybean in the rotation. Without effective land use polices, deforestation and agricultural expansion can lead to rapid soil degradation and reductions in the provision of important ecosystem services. Copyright © 2016 Elsevier B.V. All rights reserved.

Integration of Plant Defense Traits with Biological Control of Arthropod Pests: Challenges and Opportunities

PubMed Central

Peterson, Julie A.; Ode, Paul J.; Oliveira-Hofman, Camila; Harwood, James D.

2016-01-01

Crop plants exhibit a wide diversity of defensive traits and strategies to protect themselves from damage by herbivorous pests and disease. These defensive traits may be naturally occurring or artificially selected through crop breeding, including introduction via genetic engineering. While these traits can have obvious and direct impacts on herbivorous pests, many have profound effects on higher trophic levels, including the natural enemies of herbivores. Multi-trophic effects of host plant resistance have the potential to influence, both positively and negatively, biological control. Plant defense traits can influence both the numerical and functional responses of natural enemies; these interactions can be semiochemically, plant toxin-, plant nutrient-, and/or physically mediated. Case studies involving predators, parasitoids, and pathogens of crop pests will be presented and discussed. These diverse groups of natural enemies may respond differently to crop plant traits based on their own unique biology and the ecological niches they fill. Genetically modified crop plants that have been engineered to express transgenic products affecting herbivorous pests are an additional consideration. For the most part, transgenic plant incorporated protectant (PIP) traits are compatible with biological control due to their selective toxicity to targeted pests and relatively low non-target impacts, although transgenic crops may have indirect effects on higher trophic levels and arthropod communities mediated by lower host or prey number and/or quality. Host plant resistance and biological control are two of the key pillars of integrated pest management; their potential interactions, whether they are synergistic, complementary, or disruptive, are key in understanding and achieving sustainable and effective pest management. PMID:27965695

Integration of Plant Defense Traits with Biological Control of Arthropod Pests: Challenges and Opportunities.

PubMed

Peterson, Julie A; Ode, Paul J; Oliveira-Hofman, Camila; Harwood, James D

2016-01-01

Crop plants exhibit a wide diversity of defensive traits and strategies to protect themselves from damage by herbivorous pests and disease. These defensive traits may be naturally occurring or artificially selected through crop breeding, including introduction via genetic engineering. While these traits can have obvious and direct impacts on herbivorous pests, many have profound effects on higher trophic levels, including the natural enemies of herbivores. Multi-trophic effects of host plant resistance have the potential to influence, both positively and negatively, biological control. Plant defense traits can influence both the numerical and functional responses of natural enemies; these interactions can be semiochemically, plant toxin-, plant nutrient-, and/or physically mediated. Case studies involving predators, parasitoids, and pathogens of crop pests will be presented and discussed. These diverse groups of natural enemies may respond differently to crop plant traits based on their own unique biology and the ecological niches they fill. Genetically modified crop plants that have been engineered to express transgenic products affecting herbivorous pests are an additional consideration. For the most part, transgenic plant incorporated protectant (PIP) traits are compatible with biological control due to their selective toxicity to targeted pests and relatively low non-target impacts, although transgenic crops may have indirect effects on higher trophic levels and arthropod communities mediated by lower host or prey number and/or quality. Host plant resistance and biological control are two of the key pillars of integrated pest management; their potential interactions, whether they are synergistic, complementary, or disruptive, are key in understanding and achieving sustainable and effective pest management.

Environmental factors that influence the location of crop agriculture in the conterminous United States

USGS Publications Warehouse

Baker, Nancy T.; Capel, Paul D.

2011-01-01

Most crops are grown on land with shallow slope where the temperature, precipitation, and soils are favorable. In areas that are too steep, wet, or dry, landscapes have been modified to allow cultivation. Some of the limitations of the environmental factors that determine the location of agriculture can be overcome through modifications, but others cannot. On a larger-than-field scale, agricultural modifications commonly influence water availability through irrigation and (or) drainage and soil fertility and (or) organic-matter content through amendments such as manure, commercial fertilizer and lime. In general, it is not feasible to modify the other environmental factors, soil texture, soil depth, soil mineralogy, temperature, and terrain at large scales.

[Simplification of crop shortage water index and its application in drought remote sensing monitoring].

PubMed

Liu, Anlin; Li, Xingmin; He, Yanbo; Deng, Fengdong

2004-02-01

Based on the principle of energy balance, the method for calculating latent evaporation was simplified, and hence, the construction of the drought remote sensing monitoring model of crop water shortage index was also simplified. Since the modified model involved fewer parameters and reduced computing times, it was more suitable for the operation running in the routine services. After collecting the concerned meteorological elements and the NOAA/AVHRR image data, the new model was applied to monitor the spring drought in Guanzhong, Shanxi Province. The results showed that the monitoring results from the new model, which also took more considerations of the effects of the ground coverage conditions and meteorological elements such as wind speed and the water pressure, were much better than the results from the model of vegetation water supply index. From the view of the computing times, service effects and monitoring results, the simplified crop water shortage index model was more suitable for practical use. In addition, the reasons of the abnormal results of CWSI > 1 in some regions in the case studies were also discussed in this paper.

Attributes for MRB_E2RF1 Catchments by Major River Basins in the Conterminous United States: Nutrient Application (Phosphorus and Nitrogen) for Fertilizer and Manure Applied to Crops (Cropsplit), 2002

USGS Publications Warehouse

Wieczorek, Michael; LaMotte, Andrew E.

2010-01-01

This tabular data set represents the estimated amount of phosphorus and nitrogen fertilizers applied to selected crops for the year 2002, compiled for every MRB_E2RF1 catchment of Major River Basins (MRBs, Crawford and others, 2006). The source data set is based on 2002 fertilizer data (Ruddy and others, 2006) and tabulated by crop type per county (Alexander and others, 2007). The MRB_E2RF1 catchments are based on a modified version of the U.S. Environmental Protection Agency's (USEPA) ERF1_2 and include enhancements to support national and regional-scale surface-water quality modeling (Nolan and others, 2002; Brakebill and others, 2011). Data were compiled for MRB_E2RF1 catchments for the conterminous United States covering New England and Mid-Atlantic (MRB1), South Atlantic-Gulf and Tennessee (MRB2), the Great Lakes, Ohio, Upper Mississippi, and Souris-Red-Rainy (MRB3), the Missouri (MRB4), the Lower Mississippi, Arkansas-White-Red, and Texas-Gulf (MRB5), the Rio Grande, Colorado, and the Great basin (MRB6), the Pacific Northwest (MRB7) river basins, and California (MRB8).

Exploring the resilience of Bt cotton's "pro-poor success story".

PubMed

Glover, Dominic

2010-01-01

Expectations play a powerful role in driving technological change. Expectations are often encapsulated in narratives of technological promise that emphasize potential benefits and downplay potential negative impacts. Genetically modified (GM, transgenic) crops have been framed by expectations that they would be an intrinsically "pro-poor" innovation that would contribute powerfully to international agricultural development. However, expectations typically have to be scaled back in the light of experience. Published reviews of the socio-economic impacts of GM crops among poor, small-scale farmers in the developing world indicate that these effects have been very mixed and contingent on the agronomic, socio-economic and institutional settings where the technology has been applied. These conclusions should modulate expectations about the pro-poor potential of GM crop technology and focus attention on the conditions under which it might deliver substantial and sustainable benefits for poor farmers. However, the idea of GM crop technology as an intrinsically pro-poor developmental success story has been sustained in academic, public and policy arenas. This narrative depends upon an analysis that disembeds the technology from the technical, social and institutional contexts in which it is applied. Agricultural development policy should be based on a more rigorous and dispassionate analysis, rather than optimistic expectations alone.

Eight years of Conservation Agriculture-based cropping systems research in Eastern Africa to conserve soil and water and mitigate effects of climate change

NASA Astrophysics Data System (ADS)

Araya, Tesfay; Nyssen, Jan; Govaerts, Bram; Lanckriet, Sil; Baudron, Frédéric; Deckers, Jozef; Cornelis, Wim

2014-05-01

In Ethiopia, repeated plowing, complete removal of crop residues at harvest, aftermath grazing of crop fields and occurrence of repeated droughts have reduced the biomass return to the soil and aggravated cropland degradation. Conservation Agriculture (CA)-based resource conserving cropping systems may reduce runoff and soil erosion, and improve soil quality, thereby increasing crop productivity. Thus, a long-term tillage experiment has been carried out (2005 to 2012) on a Vertisol to quantify - among others - changes in runoff and soil loss for two local tillage practices, modified to integrate CA principles in semi-arid northern Ethiopia. The experimental layout was a randomized complete block design with three replications on permanent plots of 5 m by 19 m. The tillage treatments were (i) derdero+ (DER+) with a furrow and permanent raised bed planting system, ploughed only once at planting by refreshing the furrow from 2005 to 2012 and 30% standing crop residue retention, (ii) terwah+ (TER+) with furrows made at 1.5 m interval, plowed once at planting, 30% standing crop residue retention and fresh broad beds, and (iii) conventional tillage (CT) with a minimum of three plain tillage operations and complete removal of crop residues. All the plowing and reshaping of the furrows was done using the local ard plough mahresha and wheat, teff, barley and grass pea were grown. Glyphosate was sprayed starting from the third year onwards (2007) at 2 l ha-1 before planting to control pre-emergent weeds in CA plots. Runoff and soil loss were measured daily. Soil water content was monitored every 6 days. Significantly different (p<0.05) runoff coefficients averaged over 8 years were 14, 20 and 27% for DER+, TER+ and CT, respectively. Mean soil losses were 4 t ha-1 y-1 in DER+, 13 in TER+ and 18 in CT. Soil water storage during the growing season was constantly higher in CA-based systems compared with CT. A period of at least three years of cropping was required before improvements in crop yield became significant. Further, modeling of the sediment budgets shows that total soil loss due to sheet and rill erosion in cropland, when CA would be practiced at large scale in a 180 ha catchment, would reduce to 581 t y-1, instead of 1109 t y-1 under the current farmer practice. Using NASA/GISS Model II precipitation projections of IPCC scenario A1FI, CA is estimated to reduce soil loss and runoff and mitigate the effect of increased rainfall due to climate change. For smallholder farmers in semi-arid agro-ecosystems, CA-based systems constitute a field rainwater and soil conservation improvement strategy that enhances crop and economic productivity and reduces siltation of reservoirs, especially under changing climate. The reduction in draught power requirement would enable a reduction in oxen density and crop residue demand for livestock feed, which would encourage smallholder farmers to increase biomass return to the soil. Adoption of CA-based systems in the study area requires further work to improve smallholder farmers' awareness on benefits, to guarantee high standards during implementation and to design appropriate weed management strategies.

Children and genetically engineered food: potentials and problems.

PubMed

Perr, Hilary A

2002-10-01

Changes in food production and dietary practices are occurring faster than our understanding of their potential impact on children's health. Traditionally, pediatric gastroenterologists have studied food with respect to its nutritive value and digestibility, its influence on metabolism, its growth-promoting characteristics, and its relationship to risk and severity of disease. Biotechnology is now expanding the science of food to include disease prevention and treatment, as well as the feeding of children on a global scale. Bioengineered ("genetically modified", or "transgenic") plants were initially developed to enhance the food supply by increasing crop yields. Such previously developed transgenic plants are now prevalent worldwide and appear in many processed food products. The implementation of the technology of genetic modulation of food plants has led to considerable fear, controversy, and confusion as the understanding of the technology is poor in the general population. This review presents an overview of genetically modified food crops and their potential unique benefits and risks to children's health. Political, economical, and ecological issues related to transgenic crops are not discussed.

Outcrossing potential between 11 important genetically modified crops and the Chilean vascular flora.

PubMed

Sánchez, Miguel A; Cid, Pablo; Navarrete, Humberto; Aguirre, Carlos; Chacón, Gustavo; Salazar, Erika; Prieto, Humberto

2016-02-01

The potential impact of genetically modified (GM) crops on biodiversity is one of the main concerns in an environmental risk assessment (ERA). The likelihood of outcrossing and pollen-mediated gene flow from GM crops and non-GM crops are explained by the same principles and depend primarily on the biology of the species. We conducted a national-scale study of the likelihood of outcrossing between 11 GM crops and vascular plants in Chile by use of a systematized database that included cultivated, introduced and native plant species in Chile. The database included geographical distributions and key biological and agronomical characteristics for 3505 introduced, 4993 native and 257 cultivated (of which 11 were native and 246 were introduced) plant species. Out of the considered GM crops (cotton, soya bean, maize, grape, wheat, rice, sugar beet, alfalfa, canola, tomato and potato), only potato and tomato presented native relatives (66 species total). Introduced relative species showed that three GM groups were formed having: a) up to one introduced relative (cotton and soya bean), b) up to two (rice, grape, maize and wheat) and c) from two to seven (sugar beet, alfalfa, canola, tomato and potato). In particular, GM crops presenting introduced noncultivated relative species were canola (1 relative species), alfalfa (up to 4), rice (1), tomato (up to 2) and potato (up to 2). The outcrossing potential between species [OP; scaled from 'very low' (1) to 'very high' (5)] was developed, showing medium OPs (3) for GM-native relative interactions when they occurred, low (2) for GMs and introduced noncultivated and high (4) for the grape-Vitis vinifera GM-introduced cultivated interaction. This analytical tool might be useful for future ERA for unconfined GM crop release in Chile. © 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

Tempest in a tea pot: How did the public conversation on genetically modified crops drift so far from the facts?

PubMed

Goldstein, Daniel A

2014-06-01

The debate over genetically modified (GM) crops has raged in Europe since 1996, but had barely risen above a whisper in the USA until recent labeling debates raised public attention. This article will explain GM crops and traits discuss safety assessment provide a view on safety from authoritative organizations discuss selected issues of current debate, and provide the author's perspective as to why the public debate has drifted so far from scientific reality. The economic and environmental benefits of GM crops are beyond scope, but references are provided. GM food and feed undergo comprehensive assessments using recognized approaches to assure they are as safe as the conventional congener. Issues of food safety and nutrition, unrelated to the GM process, may arise when GM foods display novel components or composition. Unanticipated genetic effects in GM crops appear to be limited in contrast to existing variations among conventional varieties resulting from breeding, mutation, and natural mobile genetic elements. Allergenic potential is assessed when selecting genes for introduction into GM crops and remains a theoretical risk to date. Emerging weed and insect resistance is not unique to GM technology and will require the use of integrated pest management/best practices for pest control. Gene flow from GM crops to wild relatives is limited by existing biological barriers but can at time be a relevant consideration in gene selection and planting practices. Insect-resistant GM crops have significantly reduced use of chemical insecticides and appear to have reduced the incidence of pesticide poisoning in areas where small scale farming and hand application are common. Changes in herbicide patterns are more complex and are evolving over time in response to weed resistance management needs. Recent public debate is driven by a combination of unfounded allegations about the technology and purveyors, pseudoscience, and attempts to apply a strict precautionary principle.

The use of seasonal forecasts in a crop failure early warning system for West Africa

NASA Astrophysics Data System (ADS)

Nicklin, K. J.; Challinor, A.; Tompkins, A.

2011-12-01

Seasonal rainfall in semi-arid West Africa is highly variable. Farming systems in the region are heavily dependent on the monsoon rains leading to large variability in crop yields and a population that is vulnerable to drought. The existing crop yield forecasting system uses observed weather to calculate a water satisfaction index, which is then related to expected crop yield (Traore et al, 2006). Seasonal climate forecasts may be able to increase the lead-time of yield forecasts and reduce the humanitarian impact of drought. This study assesses the potential for a crop failure early warning system, which uses dynamic seasonal forecasts and a process-based crop model. Two sets of simulations are presented. In the first, the crop model is driven with observed weather as a control run. Observed rainfall is provided by the GPCP 1DD data set, whilst observed temperature and solar radiation data are given by the ERA-Interim reanalysis. The crop model used is the groundnut version of the General Large Area Model for annual crops (GLAM), which has been designed to operate on the grids used by seasonal weather forecasts (Challinor et al, 2004). GLAM is modified for use in West Africa by allowing multiple planting dates each season, replanting failed crops and producing parameter sets for Spanish- and Virginia- type West African groundnut. Crop yields are simulated for three different assumptions concerning the distribution and relative abundance of Spanish- and Virginia- type groundnut. Model performance varies with location, but overall shows positive skill in reproducing observed crop failure. The results for the three assumptions are similar, suggesting that the performance of the system is limited by something other than information on the type of groundnut grown. In the second set of simulations the crop model is driven with observed weather up to the forecast date, followed by ECMWF system 3 seasonal forecasts until harvest. The variation of skill with forecast date is assessed along with the extent to which forecasts can be improved by bias correction of the rainfall data. Two forms of bias correction are applied: a novel method of spatially bias correcting daily data, and statistical bias correction of the frequency and intensity distribution. Results are presented using both observed yields and the control run as the reference for verification. The potential for current dynamic seasonal forecasts to form part of an operational system giving timely and accurate warnings of crop failure is discussed. Traore S.B. et al., 2006. A Review of Agrometeorological Monitoring Tools and Methods Used in the West African Sahel. In: Motha R.P. et al., Strengthening Operational Agrometeorological Services at the National Level. Technical Bulletin WAOB-2006-1 and AGM-9, WMO/TD No. 1277. Pages 209-220. www.wamis.org/agm/pubs/agm9/WMO-TD1277.pdf Challinor A.J. et al., 2004. Design and optimisation of a large-area process based model for annual crops. Agric. For. Meteorol. 124, 99-120.

Development of agribiotechnology and biosafety regulations used to assess safety of genetically modified crops in Bangladesh.

PubMed

Nasiruddin, Khondoker M; Nasim, Anwar

2007-01-01

Bangladesh is on the verge of adopting genetically modified (GM) crops for commercial cultivation and consumption as feed and food. Most of the laboratories are engaged in tissue culture and molecular characterization on plants, whereas some have started living modified organism research with shortages of trained manpower, infrastructure, and funding. Nutritionally improved Golden Rice, biotech brinjal, and late blight-resistant potato are in contained trials in a greenhouse, and potato ring spot virus-resistant papaya is in the process of approval for a field trial. The government has taken some initiative in support of GM organism research, which include the formation of a Biotechnology Department in all institutes and the formation of the apex body, the National Task Force Committee on Biotechnology of Bangladesh under the chairpersonship of the Prime Minister. Biosafety policy guidelines and related aspects of biotechnology issues have been approved, and the laws are in the process of being promulgated. Being a party to the Cartagena Protocol, proper biosafety measures are regulated by the appropriate authority as stated. Although there are no laws made yet directly for biosafety of GM crops/foods, the relevant laws on agriculture, medicine, food, import, trade, environment, etc. may suffice and explain the situation.

DTREEv2, a computer-based support system for the risk assessment of genetically modified plants.

PubMed

Pertry, Ine; Nothegger, Clemens; Sweet, Jeremy; Kuiper, Harry; Davies, Howard; Iserentant, Dirk; Hull, Roger; Mezzetti, Bruno; Messens, Kathy; De Loose, Marc; de Oliveira, Dulce; Burssens, Sylvia; Gheysen, Godelieve; Tzotzos, George

2014-03-25

Risk assessment of genetically modified organisms (GMOs) remains a contentious area and a major factor influencing the adoption of agricultural biotech. Methodologically, in many countries, risk assessment is conducted by expert committees with little or no recourse to databases and expert systems that can facilitate the risk assessment process. In this paper we describe DTREEv2, a computer-based decision support system for the identification of hazards related to the introduction of GM-crops into the environment. DTREEv2 structures hazard identification and evaluation by means of an Event-Tree type of analysis. The system produces an output flagging identified hazards and potential risks. It is intended to be used for the preparation and evaluation of biosafety dossiers and, as such, its usefulness extends to researchers, risk assessors and regulators in government and industry. Copyright © 2013 Elsevier B.V. All rights reserved.

Weed control changes and genetically modified herbicide tolerant crops in the USA 1996–2012

PubMed Central

Brookes, Graham

2014-01-01

Crops that have been genetically modified (GM) to be tolerant to herbicides have been widely grown in the USA since 1996. The rapid and widespread adoption of this technology reflects the important economic and environmental benefits that farmers have derived from its use (equal to $21.7 billion additional farm income and a 225 million kg reduction in herbicide active ingredient use 1996–2012). During this time, weed control practices in these crops relative to the ‘conventional alternative’ have evolved to reflect experience of using the technology, the challenges that have arisen and the increasing focus in recent years on developing sustainable production systems. This paper examines the evidence on the changing nature of herbicides used with these crops and in particular how farmers addressed the challenge of weed resistance. The evidence shows that use of the technology has resulted in a net reduction in both the amount of herbicide used and the associated environmental impact, as measured by the EIQ indicator when compared to what can reasonably be expected if the area planted to GM HT crops reverted to conventional production methods. It also facilitated many farmers being able to derive the economic and environmental benefits associated with switching from a plough-based to a no tillage or conservation tillage production system. In terms of herbicide use, the technology has also contributed to a change the profile of herbicides used. A broad range of, mostly selective herbicides has been replaced by one or 2 broad-spectrum herbicides (mostly glyphosate) used in conjunction with one or 2 other (complementary) herbicides. Since the mid-2000s, the average amount of herbicide applied and the associated environmental load, as measured by the EIQ indicator, have increased on both GM HT and conventional crops. A primary reason for these changes has been increasing incidence of weed species developing populations resistant to herbicides and increased awareness of the consequences of relying on a single or very limited number of herbicides for weed control. As a result, growers of GM HT crops have become much more proactive and diversified in their weed management programs in line with weed scientist recommendations and now include other herbicides (with different and complementary modes of action) in combination with glyphosate, even where instances of weed resistance to glyphosate have not been found. The willingness to proactively diversity weed management systems in the GM HT crops is also influenced by a desire to maintain effective weed control and hence continue to enjoy the benefits of no tillage and conservation tillage. Nevertheless, despite the increase in herbicide use in recent years, the use of GM HT technology continues to deliver significant economic and environmental gains to US farmers. PMID:25523177

Weed control changes and genetically modified herbicide tolerant crops in the USA 1996-2012.

PubMed

Brookes, Graham

2014-01-01

Crops that have been genetically modified (GM) to be tolerant to herbicides have been widely grown in the USA since 1996. The rapid and widespread adoption of this technology reflects the important economic and environmental benefits that farmers have derived from its use (equal to $21.7 billion additional farm income and a 225 million kg reduction in herbicide active ingredient use 1996-2012). During this time, weed control practices in these crops relative to the 'conventional alternative' have evolved to reflect experience of using the technology, the challenges that have arisen and the increasing focus in recent years on developing sustainable production systems. This paper examines the evidence on the changing nature of herbicides used with these crops and in particular how farmers addressed the challenge of weed resistance. The evidence shows that use of the technology has resulted in a net reduction in both the amount of herbicide used and the associated environmental impact, as measured by the EIQ indicator when compared to what can reasonably be expected if the area planted to GM HT crops reverted to conventional production methods. It also facilitated many farmers being able to derive the economic and environmental benefits associated with switching from a plough-based to a no tillage or conservation tillage production system. In terms of herbicide use, the technology has also contributed to a change the profile of herbicides used. A broad range of, mostly selective herbicides has been replaced by one or 2 broad-spectrum herbicides (mostly glyphosate) used in conjunction with one or 2 other (complementary) herbicides. Since the mid-2000s, the average amount of herbicide applied and the associated environmental load, as measured by the EIQ indicator, have increased on both GM HT and conventional crops. A primary reason for these changes has been increasing incidence of weed species developing populations resistant to herbicides and increased awareness of the consequences of relying on a single or very limited number of herbicides for weed control. As a result, growers of GM HT crops have become much more proactive and diversified in their weed management programs in line with weed scientist recommendations and now include other herbicides (with different and complementary modes of action) in combination with glyphosate, even where instances of weed resistance to glyphosate have not been found. The willingness to proactively diversity weed management systems in the GM HT crops is also influenced by a desire to maintain effective weed control and hence continue to enjoy the benefits of no tillage and conservation tillage. Nevertheless, despite the increase in herbicide use in recent years, the use of GM HT technology continues to deliver significant economic and environmental gains to US farmers.

Farming system context drives the value of deep wheat roots in semi-arid environments

PubMed Central

Lilley, Julianne M.; Kirkegaard, John A.

2016-01-01

The capture of subsoil water by wheat roots can make a valuable contribution to grain yield on deep soils. More extensive root systems can capture more water, but leave the soil in a drier state, potentially limiting water availability to subsequent crops. To evaluate the importance of these legacy effects, a long-term simulation analysis at eight sites in the semi-arid environment of Australia compared the yield of standard wheat cultivars with cultivars that were (i) modified to have root systems which extract more water at depth and/or (ii) sown earlier to increase the duration of the vegetative period and hence rooting depth. We compared simulations with and without annual resetting of soil water to investigate the legacy effects of drier subsoils related to modified root systems. Simulated mean yield benefits from modified root systems declined from 0.1–0.6 t ha−1 when annually reset, to 0–0.2 t ha−1 in the continuous simulation due to a legacy of drier soils (mean 0–32mm) at subsequent crop sowing. For continuous simulations, predicted yield benefits of >0.2 t ha−1 from more extensive root systems were rare (3–10% of years) at sites with shallow soils (<1.0 m), but occurred in 14–44% of years at sites with deeper soils (1.6–2.5 m). Earlier sowing had a larger impact than modified root systems on water uptake (14–31 vs 2–17mm) and mean yield increase (up to 0.7 vs 0–0.2 t ha−1) and the benefits occurred on deep and shallow soils and in more years (9–79 vs 3–44%). Increasing the proportion of crops in the sequence which dry the subsoil extensively has implications for the farming system productivity, and the crop sequence must be managed tactically to optimize overall system benefits. PMID:26976814

Farming system context drives the value of deep wheat roots in semi-arid environments.

PubMed

Lilley, Julianne M; Kirkegaard, John A

2016-06-01

The capture of subsoil water by wheat roots can make a valuable contribution to grain yield on deep soils. More extensive root systems can capture more water, but leave the soil in a drier state, potentially limiting water availability to subsequent crops. To evaluate the importance of these legacy effects, a long-term simulation analysis at eight sites in the semi-arid environment of Australia compared the yield of standard wheat cultivars with cultivars that were (i) modified to have root systems which extract more water at depth and/or (ii) sown earlier to increase the duration of the vegetative period and hence rooting depth. We compared simulations with and without annual resetting of soil water to investigate the legacy effects of drier subsoils related to modified root systems. Simulated mean yield benefits from modified root systems declined from 0.1-0.6 t ha(-1) when annually reset, to 0-0.2 t ha(-1) in the continuous simulation due to a legacy of drier soils (mean 0-32mm) at subsequent crop sowing. For continuous simulations, predicted yield benefits of >0.2 t ha(-1) from more extensive root systems were rare (3-10% of years) at sites with shallow soils (<1.0 m), but occurred in 14-44% of years at sites with deeper soils (1.6-2.5 m). Earlier sowing had a larger impact than modified root systems on water uptake (14-31 vs 2-17mm) and mean yield increase (up to 0.7 vs 0-0.2 t ha(-1)) and the benefits occurred on deep and shallow soils and in more years (9-79 vs 3-44%). Increasing the proportion of crops in the sequence which dry the subsoil extensively has implications for the farming system productivity, and the crop sequence must be managed tactically to optimize overall system benefits. © The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology.

GEOGLAM Crop Assessment Tool: Adapting from global agricultural monitoring to food security monitoring

NASA Astrophysics Data System (ADS)

Humber, M. L.; Becker-Reshef, I.; Nordling, J.; Barker, B.; McGaughey, K.

2014-12-01

The GEOGLAM Crop Monitor's Crop Assessment Tool was released in August 2013 in support of the GEOGLAM Crop Monitor's objective to develop transparent, timely crop condition assessments in primary agricultural production areas, highlighting potential hotspots of stress/bumper crops. The Crop Assessment Tool allows users to view satellite derived products, best available crop masks, and crop calendars (created in collaboration with GEOGLAM Crop Monitor partners), then in turn submit crop assessment entries detailing the crop's condition, drivers, impacts, trends, and other information. Although the Crop Assessment Tool was originally intended to collect data on major crop production at the global scale, the types of data collected are also relevant to the food security and rangelands monitoring communities. In line with the GEOGLAM Countries at Risk philosophy of "foster[ing] the coordination of product delivery and capacity building efforts for national and regional organizations, and the development of harmonized methods and tools", a modified version of the Crop Assessment Tool is being developed for the USAID Famine Early Warning Systems Network (FEWS NET). As a member of the Countries at Risk component of GEOGLAM, FEWS NET provides agricultural monitoring, timely food security assessments, and early warnings of potential significant food shortages focusing specifically on countries at risk of food security emergencies. While the FEWS NET adaptation of the Crop Assessment Tool focuses on crop production in the context of food security rather than large scale production, the data collected is nearly identical to the data collected by the Crop Monitor. If combined, the countries monitored by FEWS NET and GEOGLAM Crop Monitor would encompass over 90 countries representing the most important regions for crop production and food security.

Less waste corn, more land in soybeans, and the switch to genetically modified crops: trends with important implications to wildlife management

USGS Publications Warehouse

Krapu, G.L.; Brandt, D.A.; Cox, R.R.

2004-01-01

An abundance of waste corn, a key food of many wildlife species, has helped make possible the widespread success of wildlife management in the United States over the past half century. We found waste corn post harvest in Nebraska declined by 47% from 1978 to 1998 due primarily to improvements in combine headers resulting in a marked decline in ear loss. The reduction in waste coincided with major declines in fat storage by sandhill cranes and white-fronted geese during spring migration. Sandhill cranes, northern pintails, white-fronted geese, and lesser snow geese avoided soybeans while staging in spring in the Rainwater Basin Area and Central Platte River Valley. These findings and other literature suggest soybeans are a marginal food for wildlife particularly during periods of high energy requirements. Soybean acreage has increased by 600% in the United States since 1950 and now comprises nearly one-quarter of the nation>'s cropland. With over 80% of the soybean crop now in genetically modified varieties and treated with glyphosate, weed seed is becoming scarce in soybean fields leaving limited food for wildlife on 72 million acres of U.S. cropland. We suggest that the combined effect of increasing efficiency of crop harvesting techniques, expansion of soybeans and other crops poorly suited for wildlife nutrient needs, and more efficient weed control through the shift to genetically modified crops may severely limit seed-eating wildlife populations in the future unless ways are found to replace high energy food sources being lost. We encourage more research to gain greater insight into effects of declining food resources on wildlife populations and propose that the conservation title of the 2002 farm bill be used as a mechanism to replace part of the high-energy food being lost due to changes in production agriculture.

Tanzanian farmers' knowledge and attitudes to GM biotechnology and the potential use of GM crops to provide improved levels of food security. A Qualitative Study

PubMed Central

2010-01-01

Background Genetically Modified (GM) crops have been championed as one possible method to improve food security and individual nutritional status in sub Saharan Africa. Understanding and acceptability of GM crop technology to farmers and consumers have not been assessed. We developed a qualitative research study involving farmers as both producers and consumers to gauge the understanding of GM crop technology, its acceptability, and identifying issues of concern. Methods Nineteen individual interviews (10 male and 9 female) and five mixed gender focus group discussions with local farmers were conducted in 3 regions in Tanzania. Analysis took place concurrently with data collection. Following initial interviews, subsequent questions were adjusted based on emerging themes. Results Understanding, awareness and knowledge of GM crop technology and terminology and its potential risks and benefits was very poor in all regions. Receptivity to the potential use of GM crops was, however, high. Respondents focused on the potential benefits of GM crops rather than any potential longer term health risks. A number of factors, most significantly field trial data, would influence farmers' decisions regarding the introduction of GM crop varieties into their farming practice. Understanding of the potential improved health provision possible by changes in agricultural practice and food-related decision making, and the health benefits of a diet containing essential vitamins, minerals and micronutrients is also poor in these communities. Conclusion This study forms a basis from which further research work can be undertaken. It is important to continue to assess opinions and attitudes of farmers and consumers in sub Saharan Africa towards potential use of GM technologies whilst highlighting the importance of the relationship between agriculture, health and development. This will allow people in the region to make accurate, informed decisions about whether they believe use of GM biotechnology is an appropriate way in which to tackle issues of food security, provide improved health and drive development. PMID:20624286

Tanzanian farmers' knowledge and attitudes to GM biotechnology and the potential use of GM crops to provide improved levels of food security. A Qualitative Study.

PubMed

Lewis, Christopher P; Newell, James N; Herron, Caroline M; Nawabu, Haidari

2010-07-12

Genetically Modified (GM) crops have been championed as one possible method to improve food security and individual nutritional status in sub Saharan Africa. Understanding and acceptability of GM crop technology to farmers and consumers have not been assessed. We developed a qualitative research study involving farmers as both producers and consumers to gauge the understanding of GM crop technology, its acceptability, and identifying issues of concern. Nineteen individual interviews (10 male and 9 female) and five mixed gender focus group discussions with local farmers were conducted in 3 regions in Tanzania. Analysis took place concurrently with data collection. Following initial interviews, subsequent questions were adjusted based on emerging themes. Understanding, awareness and knowledge of GM crop technology and terminology and its potential risks and benefits was very poor in all regions. Receptivity to the potential use of GM crops was, however, high. Respondents focused on the potential benefits of GM crops rather than any potential longer term health risks. A number of factors, most significantly field trial data, would influence farmers' decisions regarding the introduction of GM crop varieties into their farming practice. Understanding of the potential improved health provision possible by changes in agricultural practice and food-related decision making, and the health benefits of a diet containing essential vitamins, minerals and micronutrients is also poor in these communities. This study forms a basis from which further research work can be undertaken. It is important to continue to assess opinions and attitudes of farmers and consumers in sub Saharan Africa towards potential use of GM technologies whilst highlighting the importance of the relationship between agriculture, health and development. This will allow people in the region to make accurate, informed decisions about whether they believe use of GM biotechnology is an appropriate way in which to tackle issues of food security, provide improved health and drive development.

Need and prospects for using tracer techniques in fruit breeding

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zagaja, S.W.

1975-01-01

Compared with staple food crops and fodder crops, the commercial value of fruits depends more on their quality than on their productivity. Modified screening techniques are therefore required for fruit crop improvement. The following are areas of fruit crop improvement in which tracer techniques could be used to speed up the progress: assessment of rootstocks and particularly their effect on vigour of growth and productivity of the trees; assessment of mutants productivity; assessment of adaptability to various habitats of fruit tree cultivars and rootstocks; and juvenility studies on fruit trees, aimed at shortening the juvenile stage. On each of thesemore » subjects background information is provided and suggestions are made concerning the scope of research. (auth)« less

[Real-time irrigation forecast of cotton mulched with plastic film under drip irrigation based on meteorological date].

PubMed

Shen, Xiao-jun; Sun, Jing-sheng; Li, Ming-si; Zhang, Ji-yang; Wang, Jing-lei; Li, Dong-wei

2015-02-01

It is important to improve the real-time irrigation forecasting precision by predicting real-time water consumption of cotton mulched with plastic film under drip irrigation based on meteorological data and cotton growth status. The model parameters for calculating ET0 based on Hargreaves formula were determined using historical meteorological data from 1953 to 2008 in Shihezi reclamation area. According to the field experimental data of growing season in 2009-2010, the model of computing crop coefficient Kc was established based on accumulated temperature. On the basis of crop water requirement (ET0) and Kc, a real-time irrigation forecast model was finally constructed, and it was verified by the field experimental data in 2011. The results showed that the forecast model had high forecasting precision, and the average absolute values of relative error between the predicted value and measured value were about 3.7%, 2.4% and 1.6% during seedling, squaring and blossom-boll forming stages, respectively. The forecast model could be used to modify the predicted values in time according to the real-time meteorological data and to guide the water management in local film-mulched cotton field under drip irrigation.

Development of agricultural biotechnology and biosafety regulations used to assess the safety of genetically modified crops in Iran.

PubMed

Mousavi, Amir; Malboobi, Mohammad A; Esmailzadeh, Nasrin S

2007-01-01

Rapid progress in the application of biotechnological methodologies and development of genetically modified crops in Iran necessitated intensive efforts to establish proper organizations and prepare required rules and regulations at the national level to ensure safe application of biotechnology in all pertinent aspects. Practically, preparation of a national biotechnology strategic plan in the country coincided with development of a national biosafety framework that was the basis for the drafted biosafety law. Although biosafety measures were observed by researchers voluntarily, the establishment of national biosafety organizations since the year 2000 built a great capacity to deal with biosafety issues in the present and future time, particularly with respect to food and agricultural biotechnology.

Genetically modified crops: Brazilian law and overview.

PubMed

Marinho, C D; Martins, F J O; Amaral Júnior, A T; Gonçalves, L S A; dos Santos, O J A P; Alves, D P; Brasileiro, B P; Peternelli, L A

2014-07-07

In Brazil, the first genetically modified (GM) crop was released in 1998, and it is estimated that 84, 78, and 50% of crop areas containing soybean, corn, and cotton, respectively, were transgenic in 2012. This intense and rapid adoption rate confirms that the choice to use technology has been the main factor in developing national agriculture. Thus, this review focuses on understanding these dynamics in the context of farmers, trade relations, and legislation. To accomplish this goal, a survey was conducted using the database of the National Cultivar Registry and the National Service for Plant Variety Protection of the Ministry of Agriculture, Livestock and Supply [Ministério da Agricultura, Pecuária e Abastecimento (MAPA)] between 1998 and October 13, 2013. To date, 36 events have been released: five for soybeans, 18 for corn, 12 for cotton, and one for beans. From these events, 1395 cultivars have been developed and registered: 582 for soybean, 783 for corn and 30 for cotton. Monsanto owns 73.05% of the technologies used to develop these cultivars, while the Dow AgroScience - DuPont partnership and Syngenta have 16.34 and 4.37% ownership, respectively. Thus, the provision of transgenic seeds by these companies is an oligopoly supported by legislation. Moreover, there has been a rapid replacement of conventional crops by GM crops, whose technologies belong almost exclusively to four multinational companies, with the major ownership by Monsanto. These results reflect a warning to the government of the increased dependence on multinational corporations for key agricultural commodities.

Development and application of modern agricultural biotechnology in Botswana: The potentials, opportunities and challenges

PubMed Central

Batlang, Utlwang; Tsurupe, Gorata; Segwagwe, Amogelang; Obopile, Motshwari

2014-01-01

In Botswana, approximately 40% of the population live in rural areas and derive most of their livelihood from agriculture by keeping livestock and practising arable farming. Due to the nature of their farming practises livestock and crops are exposed to diseases and environmental stresses. These challenges offer opportunities for application of biotechnology to develop adaptable materials to the country's environment. On the other hand, the perceived risk of genetically modified organisms (GMOs) has dimmed the promise of the technology for its application in agriculture. This calls for a holistic approach to the application of biotechnology to address issues of biosafety of GMOs. We have therefore assessed the potentials, challenges and opportunities to apply biotechnology with specific emphasis on agriculture, taking cognisance of requirement for its research, development and application in research and teaching institutions. In order to achieve this, resource availability, infrastructure, human and laboratory requirements were analyzed. The analysis revealed that the country has the capacity to carry out research in biotechnology in the development and production of genetically modified crops for food and fodder crops. These will include gene discovery, genetic transformation and development of systems to comply with the world regulatory framework on biosafety. In view of the challenges facing the country in agriculture, first generation biotech crops could be released for production. Novel GM products for development may include disease diagnosis kits, animal disease vaccines, and nutrient use efficiency, drought, and pest and disease resistant food and fodder crops. PMID:25437237

Development and application of modern agricultural biotechnology in Botswana: the potentials, opportunities and challenges.

PubMed

Batlang, Utlwang; Tsurupe, Gorata; Segwagwe, Amogelang; Obopile, Motshwari

2014-07-03

In Botswana, approximately 40% of the population live in rural areas and derive most of their livelihood from agriculture by keeping livestock and practising arable farming. Due to the nature of their farming practises livestock and crops are exposed to diseases and environmental stresses. These challenges offer opportunities for application of biotechnology to develop adaptable materials to the country's environment. On the other hand, the perceived risk of genetically modified organisms (GMOs) has dimmed the promise of the technology for its application in agriculture. This calls for a holistic approach to the application of biotechnology to address issues of biosafety of GMOs. We have therefore assessed the potentials, challenges and opportunities to apply biotechnology with specific emphasis on agriculture, taking cognisance of requirement for its research, development and application in research and teaching institutions. In order to achieve this, resource availability, infrastructure, human and laboratory requirements were analyzed. The analysis revealed that the country has the capacity to carry out research in biotechnology in the development and production of genetically modified crops for food and fodder crops. These will include gene discovery, genetic transformation and development of systems to comply with the world regulatory framework on biosafety. In view of the challenges facing the country in agriculture, first generation biotech crops could be released for production. Novel GM products for development may include disease diagnosis kits, animal disease vaccines, and nutrient use efficiency, drought, and pest and disease resistant food and fodder crops.

Recent Honey Bee Colony Declines

DTIC Science & Technology

2007-06-20

climate and temperature changes,38 the effects of feed supplements that are produced from transgenic or genetically modified crops, such as high - fructose ... corn syrup ,39 and also the effects of cell phone transmissions and radiation from power lines that may be interfering with a bee’s navigational...podcasts.psu.edu/taxonomy/term/62]. Staple crops such as wheat, corn , and rice do not rely on insect pollination and are mostly wind pollinated

Risk assessment of Bt crops on the non-target plant-associated insects and soil organisms.

PubMed

Yaqoob, Amina; Shahid, Ahmad Ali; Samiullah, Tahir Rehman; Rao, Abdul Qayyum; Khan, Muhammad Azmat Ullah; Tahir, Sana; Mirza, Safdar Ali; Husnain, Tayyab

2016-06-01

Transgenic plants containing Bacillus thuringiensis (Bt) genes are being cultivated worldwide to express toxic insecticidal proteins. However, the commercial utilisation of Bt crops greatly highlights biosafety issues worldwide. Therefore, assessing the risks caused by genetically modified crops prior to their commercial cultivation is a critical issue to be addressed. In agricultural biotechnology, the goal of safety assessment is not just to identify the safety of a genetically modified (GM) plant, rather to demonstrate its impact on the ecosystem. Various experimental studies have been made worldwide during the last 20 years to investigate the risks and fears associated with non-target organisms (NTOs). The NTOs include beneficial insects, natural pest controllers, rhizobacteria, growth promoting microbes, pollinators, soil dwellers, aquatic and terrestrial vertebrates, mammals and humans. To highlight all the possible risks associated with different GM events, information has been gathered from a total of 76 articles, regarding non-target plant and soil inhabiting organisms, and summarised in the form of the current review article. No significant harmful impact has been reported in any case study related to approved GM events, although critical risk assessments are still needed before commercialisation of these crops. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

RNAi-mediated resistance to viruses in genetically engineered plants.

PubMed

Ibrahim, Abdulrazak B; Aragão, Francisco J L

2015-01-01

RNA interference (RNAi) has emerged as a leading technology in designing genetically modified crops engineered to resist viral infection. The last decades have seen the development of a large number of crops whose inherent posttranscriptional gene silencing mechanism has been exploited to target essential viral genes through the production of dsRNA that triggers an endogenous RNA-induced silencing complex (RISC), leading to gene silencing in susceptible viruses conferring them with resistance even before the onset of infection. Selection and breeding events have allowed for establishing this highly important agronomic trait in diverse crops. With improved techniques and the availability of new data on genetic diversity among several viruses, significant progress is being made in engineering plants using RNAi with the release of a number of commercially available crops. Biosafety concerns with respect to consumption of RNAi crops, while relevant, have been addressed, given the fact that experimental evidence using miRNAs associated with the crops shows that they do not pose any health risk to humans and animals.

Environmental impacts of genetically modified (GM) crop use 1996-2014: Impacts on pesticide use and carbon emissions.

PubMed

Brookes, Graham; Barfoot, Peter

2016-04-02

This paper updates previous assessments of important environmental impacts associated with using crop biotechnology in global agriculture. It focuses on the environmental impacts associated with changes in pesticide use and greenhouse gas emissions arising from the use of GM crops since their first widespread commercial use in the mid 1990s. The adoption of GM insect resistant and herbicide tolerant technology has reduced pesticide spraying by 581.4 million kg (-8.2%) and, as a result, decreased the environmental impact associated with herbicide and insecticide use on these crops (as measured by the indicator, the Environmental Impact Quotient [EIQ]) by18.5%. The technology has also facilitated important cuts in fuel use and tillage changes, resulting in a significant reduction in the release of greenhouse gas emissions from the GM cropping area. In 2014, this was equivalent to removing nearly 10 million cars from the roads.

Environmental impacts of genetically modified (GM) crop use 1996-2015: Impacts on pesticide use and carbon emissions.

PubMed

Brookes, Graham; Barfoot, Peter

2017-04-03

This paper updates previous assessments of important environmental impacts associated with using crop biotechnology in global agriculture. It focuses on the environmental impacts associated with changes in pesticide use and greenhouse gas emissions arising from the use of GM crops since their first widespread commercial use in the mid-1990s. The adoption of GM insect resistant and herbicide tolerant technology has reduced pesticide spraying by 618.7 million kg (-8.1%) and, as a result, decreased the environmental impact associated with herbicide and insecticide use on these crops (as measured by the indicator, the Environmental Impact Quotient (EIQ)) by18.6%. The technology has also facilitated important cuts in fuel use and tillage changes, resulting in a significant reduction in the release of greenhouse gas emissions from the GM cropping area. In 2015, this was equivalent to removing 11.9 million cars from the roads.

Key global environmental impacts of genetically modified (GM) crop use 1996–2012

PubMed Central

Barfoot, Peter; Brookes, Graham

2014-01-01

Against the background of increasing awareness and appreciation of issues such as global warming and the impact of mankind’s activities such as agriculture on the global environment, this paper updates previous assessments of some key environmental impacts that crop biotechnology has had on global agriculture. It focuses on the environmental impacts associated with changes in pesticide use and greenhouse gas emissions arising from the use of GM crops. The adoption of the technology has reduced pesticide spraying by 503 million kg (-8.8%) and, as a result, decreased the environmental impact associated with herbicide and insecticide use on these crops (as measured by the indicator the Environmental Impact Quotient [EIQ]) by 18.7%. The technology has also facilitated a significant reduction in the release of greenhouse gas emissions from this cropping area, which, in 2012, was equivalent to removing 11.88 million cars from the roads. PMID:24637726

Environmental impacts of genetically modified (GM) crop use 1996–2013: Impacts on pesticide use and carbon emissions

PubMed Central

Brookes, Graham; Barfoot, Peter

2015-01-01

ABSTRACT This paper updates previous assessments of how crop biotechnology has changed the environmental impact of global agriculture. It focuses on the environmental impacts associated with changes in pesticide use and greenhouse gas emissions arising from the use of GM crops since their first widespread commercial use in the mid 1990s. The adoption of GM insect resistant and herbicide tolerant technology has reduced pesticide spraying by 553 million kg (−8.6%) and, as a result, decreased the environmental impact associated with herbicide and insecticide use on these crops (as measured by the indicator the Environmental Impact Quotient (EIQ)) by19.1%. The technology has also facilitated important cuts in fuel use and tillage changes, resulting in a significant reduction in the release of greenhouse gas emissions from the GM cropping area. In 2013, this was equivalent to removing 12.4 million cars from the roads. PMID:25760405

Environmental impacts of genetically modified (GM) crop use 1996-2013: Impacts on pesticide use and carbon emissions.

PubMed

Brookes, Graham; Barfoot, Peter

2015-01-01

This paper updates previous assessments of how crop biotechnology has changed the environmental impact of global agriculture. It focuses on the environmental impacts associated with changes in pesticide use and greenhouse gas emissions arising from the use of GM crops since their first widespread commercial use in the mid 1990s. The adoption of GM insect resistant and herbicide tolerant technology has reduced pesticide spraying by 553 million kg (-8.6%) and, as a result, decreased the environmental impact associated with herbicide and insecticide use on these crops (as measured by the indicator the Environmental Impact Quotient (EIQ)) by 19.1%. The technology has also facilitated important cuts in fuel use and tillage changes, resulting in a significant reduction in the release of greenhouse gas emissions from the GM cropping area. In 2013, this was equivalent to removing 12.4 million cars from the roads.

Genetically modified foods and social concerns.

PubMed

Maghari, Behrokh Mohajer; Ardekani, Ali M

2011-07-01

Biotechnology is providing us with a wide range of options for how we can use agricultural and commercial forestry lands. The cultivation of genetically modified (GM) crops on millions of hectares of lands and their injection into our food chain is a huge global genetic experiment involving all living beings. Considering the fast pace of new advances in production of genetically modified crops, consumers, farmers and policymakers worldwide are challenged to reach a consensus on a clear vision for the future of world food supply. The current food biotechnology debate illustrates the serious conflict between two groups: 1) Agri-biotech investors and their affiliated scientists who consider agricultural biotechnology as a solution to food shortage, the scarcity of environmental resources and weeds and pests infestations; and 2) independent scientists, environmentalists, farmers and consumers who warn that genetically modified food introduces new risks to food security, the environment and human health such as loss of biodiversity; the emergence of superweeds and superpests; the increase of antibiotic resistance, food allergies and other unintended effects. This article reviews major viewpoints which are currently debated in the food biotechnology sector in the world. It also lays the ground-work for deep debate on benefits and risks of Biotech-crops for human health, ecosystems and biodiversity. In this context, although some regulations exist, there is a need for continuous vigilance for all countries involved in producing genetically engineered food to follow the international scientific bio-safety testing guidelines containing reliable pre-release experiments and post-release track of transgenic plants to protect public health and avoid future environmental harm.

A mathematical model of reservoir sediment quality prediction based on land-use and erosion processes in watershed

NASA Astrophysics Data System (ADS)

Junakova, N.; Balintova, M.; Junak, J.

2017-10-01

The aim of this paper is to propose a mathematical model for determining of total nitrogen (N) and phosphorus (P) content in eroded soil particles with emphasis on prediction of bottom sediment quality in reservoirs. The adsorbed nutrient concentrations are calculated using the Universal Soil Loss Equation (USLE) extended by the determination of the average soil nutrient concentration in top soils. The average annual vegetation and management factor is divided into five periods of the cropping cycle. For selected plants, the average plant nutrient uptake divided into five cropping periods is also proposed. The average nutrient concentrations in eroded soil particles in adsorbed form are modified by sediment enrichment ratio to obtain the total nutrient content in transported soil particles. The model was designed for the conditions of north-eastern Slovakia. The study was carried out in the agricultural basin of the small water reservoir Klusov.

Variables Affecting Secondary School Students' Willingness to Eat Genetically Modified Food Crops

ERIC Educational Resources Information Center

Maes, Jasmien; Bourgonjon, Jeroen; Gheysen, Godelieve; Valcke, Martin

2018-01-01

A large-scale cross-sectional study (N = 4002) was set up to determine Flemish secondary school students' willingness to eat genetically modified food (WTE) and to link students' WTE to previously identified key variables from research on the acceptance of genetic modification (GM). These variables include subjective and objective knowledge about…

Molecular Approaches for High Throughput Detection and Quantification of Genetically Modified Crops: A Review

PubMed Central

Salisu, Ibrahim B.; Shahid, Ahmad A.; Yaqoob, Amina; Ali, Qurban; Bajwa, Kamran S.; Rao, Abdul Q.; Husnain, Tayyab

2017-01-01

As long as the genetically modified crops are gaining attention globally, their proper approval and commercialization need accurate and reliable diagnostic methods for the transgenic content. These diagnostic techniques are mainly divided into two major groups, i.e., identification of transgenic (1) DNA and (2) proteins from GMOs and their products. Conventional methods such as PCR (polymerase chain reaction) and enzyme-linked immunosorbent assay (ELISA) were routinely employed for DNA and protein based quantification respectively. Although, these Techniques (PCR and ELISA) are considered as significantly convenient and productive, but there is need for more advance technologies that allow for high throughput detection and the quantification of GM event as the production of more complex GMO is increasing day by day. Therefore, recent approaches like microarray, capillary gel electrophoresis, digital PCR and next generation sequencing are more promising due to their accuracy and precise detection of transgenic contents. The present article is a brief comparative study of all such detection techniques on the basis of their advent, feasibility, accuracy, and cost effectiveness. However, these emerging technologies have a lot to do with detection of a specific event, contamination of different events and determination of fusion as well as stacked gene protein are the critical issues to be addressed in future. PMID:29085378

A Multi-sensor Approach to Identify Crop Sensitivity Related to Climate Variability in Central India

NASA Astrophysics Data System (ADS)

Mondal, P.; DeFries, R. S.; Jain, M.; Robertson, A. W.; Galford, G. L.; Small, C.

2012-12-01

Agriculture is a primary source of livelihood for over 70% of India's population, with staple crops (e.g. winter wheat) playing a pivotal role in satisfying an ever-increasing food-demand of a growing population. Agricultural yield in India has been reported to be highly correlated with the timing and total amount of monsoon rainfall and/or temperature depending on crop type. With expected change in future climate (temperature and precipitation), significant fluctuations in crop yields are projected for near future. To date, little work has identified the sensitivity of cropping intensity, or the number of crops planted in a given year, to climate variability. The objective of this study is to shed light on relative importance of different climate parameters through a statistical analysis of inter-annual variations in cropping intensity at a regional scale, which may help identify adaptive strategies in response to future climate anomalies. Our study focuses on a highly human-modified landscape in central India, and uses a multi-sensor approach to determine the sensitivity of agriculture to climate variability. First, we assembled the 16-day time-series of 250m Moderate Resolution Imaging Spectroradiometer (MODIS) Enhanced Vegetation Index (EVI), and applied a spline function-based smoothing algorithm to develop maps of monsoon and winter crops in Central India for a decadal time-span. A hierarchical model involving moderate resolution Landsat (30m) data was used to estimate the heterogeneity of the spectral signature within the MODIS dataset (250m). We then compared the season-specific cropping patterns with spatio-temporal variability in climate parameters derived from the Tropical Rainfall Measuring Mission (TRMM) data. Initial data indicates that the existence of a monsoon crop has moderate to strong correlation with wet season end date (ρ = .522), wet season length (ρ = .522), and the number of rainy days during wet season (ρ = .829). Existence of a winter crop, however, has a moderately strong correlation with wet season start date (ρ = .577). In addition, winter crop yield (ton/ha) has a moderate correlation with wet season end date (ρ = .624), number of rainy days during the wet season (ρ = .492), and during the dry season (ρ = .410). Future work will assess which other factors influence cropping intensity (e.g. access to irrigation among many other), since a complex interplay of bio-physical and socio-economic factors governs the decision-making at the farm-level, ultimately leading to inter-annual variability in cropping intensity and/or yield.

Real-time x-ray fluorescence analysis of crop canopy to spatially assess phytoextraction efficiency and subsurface status of low-Z elements: a case study for phosphorus

NASA Astrophysics Data System (ADS)

Dao, Thanh

2017-04-01

Leaf analysis has been extensively used to interpret results of nutrient supplementation studies about crop growth and yield responses, and to define availability thresholds for a wide range of soils and climatic conditions. The compositional results reflect the nutritional status, uptake efficiency, and the geo-chemical environment of the element in the subsurface. An X-ray fluorescence (XRF)-based proximal sensing approach was evaluated and proposed for real-time determination of water content and element-specific composition of corn seedling leaves, which was comprised mostly of essential macronutrients of low-atomic number Z, such as phosphorus (P) or potassium. Intensities of scattered radiation associated with the X-ray tube Ag anode were significantly correlated with leaf water content (θw), which was used to normalize fluorescence intensities of P. Crop canopy water status was also obtained as ancillary data. The θw - P relative concentration relationship was best described by a sigmoidal function (r2 = 0.938 and RMSE=0.02). The Ag-Lα line was deemed to be effective for normalizing the intensities of Kα lines of P and other low-Z elements, in addition to the commonly used Kα and Kβ lines. Its intensity was significantly correlated to leaf water content and was used to develop calibrations and obtain P concentration on a dry weight basis and unbiased estimates of crop P status. Therefore, the in situ fluorescence sensing system presents a new paradigm in nutrient management to re-evaluate calibrations of observed crop responses against those predicted by current soil testing and fertility recommendations. Updates to the rates of supplemental P and crop growth response relationships are critically needed as crop cultivars, supplemental P sources, or alternative soil-crop management systems are continually changing. Changes in soil microenvironments that are site- or field-specific, and climate are expected to continue to be the norm and can modify those soil-plant relationships. The high-throughput of hand-held XRFS enhances our ability to make management adjustment, particularly at the short early stages of growth, when crop plants are most susceptible to P deficiency. The precision of macronutrient management can be applied at a field-specific scale. As the process can be repeated for each growing season, the knowledge base of soil fertility, crop extraction efficiency and uptake, and elemental availability can only grow in time to improve the predictability of site-specific plant responses to given yield goals and levels of nutrient and soil management inputs. Matching nutrient supply to actual levels needed by the crop minimizes loss of excess agricultural inputs and reduces the risks of adverse impact on the health of the surrounding soil and water resources.

Between myth and reality: genetically modified maize, an example of a sizeable scientific controversy.

PubMed

Wisniewski, Jean-Pierre; Frangne, Nathalie; Massonneau, Agnès; Dumas, Christian

2002-11-01

Maize is a major crop plant with essential agronomical interests and a model plant for genetic studies. With the development of plant genetic engineering technology, many transgenic strains of this monocotyledonous plant have been produced over the past decade. In particular, field-cultivated insect-resistant Bt-maize hybrids are at the centre of an intense debate between scientists and organizations recalcitrant to genetically modified organisms (GMOs). This debate, which addresses both safety and ethical aspects, has raised questions about the impact of genetically modified (GM) crops on the biodiversity of traditional landraces and on the environment. Here, we review some of the key points of maize genetic history as well as the methods used to stably transform this cereal. We describe the genetically engineered Bt-maizes available for field cultivation and we investigate the controversial reports on their impacts on non-target insects such as the monarch butterfly and on the flow of transgenes into Mexican maize landraces.

Impact of genetically modified organisms on aquatic environments: Review of available data for the risk assessment.

PubMed

Pott, Antonia; Otto, Mathias; Schulz, Ralf

2018-09-01

The aquatic environment is strongly connected to the surrounding agricultural landscapes, which regularly serve as sources of stressors such as agrochemicals. Genetically modified crops, which are cultivated on a large scale in many countries, may also act as stressors. Despite the commercial use of genetically modified organisms (GMOs) for over 20years, their impact on the aquatic environment came into focus only 10years ago. We present the status quo of the available scientific data in order to provide an input for informed aquatic risk assessment of GMOs. We could identify only 39 publications, including 84 studies, dealing with GMOs in the aquatic environment, and our analysis shows substantial knowledge gaps. The available information is restricted to a small number of crop plants, traits, events, and test organisms. The analysis of effect studies reveals that only a narrow range of organisms has been tested and that studies on combinatorial actions of stressors are virtually absent. The analysis of fate studies shows that many aspects, such as the fate of leached toxins, degradation of plant material, and distribution of crop residues in the aquatic habitat, are insufficiently investigated. Together with these research needs, we identify standardization of test methods as an issue of high priority, both for research and risk assessment needed for GMO regulation. Copyright © 2018 Elsevier B.V. All rights reserved.

Climate sensitivity of DSSAT under different agriculture practice scenarios in China

NASA Astrophysics Data System (ADS)

Xia, L.; Robock, A.

2014-12-01

Crop yields are sensitive to both agricultural practice and climate changes. Under different agricultural practice scenarios, crop yield may have different climate sensitivities. Since it is important to understand how future climate changes affect agriculture productivity and what the potential adaptation strategies would be to compensate for possible negative impacts on crop production, we performed experiments to study climate sensitivity under different agricultural practice scenarios for rice, maize and wheat in the top four production provinces in China using the Decision Support System for Agrotechnology Transfer (DSSAT) crop model. The agricultural practice scenarios include four categories: different amounts of nitrogen fertilizer or no nitrogen stress; irrigation turned on or off, or no water stress; all possible seeds in the DSSAT cultivar data base; and different planting dates. For the climate sensitivity test, the control climate is from 1998 to 2007, and we individually modify four climate variables: daily maximum and minimum temperature by +2 °C and -2 °C, daily precipitation by +20% and -20%, and daily solar radiation by + 20% and -20%. With more nitrogen fertilizer applied, crops are more sensitive to temperature changes as well as precipitation changes because of their release from nitrogen limitation. With irrigation turned on, crop yield sensitivity to temperature decreases in most of the regions depending on the amount of the local precipitation, since more water is available and soil temperature varies less with higher soil moisture. Those results indicate that there could be possible agriculture adaptation strategies under certain future climate scenarios. For example, increasing nitrogen fertilizer usage by a certain amount might compensate for the negative impact on crop yield from climate changes. However, since crops are more sensitive to climate changes when there is more nitrogen fertilizer applied, if the climate changes are unfavorable to crop yields, increasing nitrogen fertilizer usage at certain levels might enhance the negative climate change impact. Enhanced nitrogen fertilizer use might have additional negative impacts on climate because of nitrogen emissions to the atmosphere, but those effects were not studied here.

RNA interference-based silencing of the alpha-amylase (amy1) gene in Aspergillus flavus decreases fungal growth and aflatoxin production in maize kernels.

PubMed

Gilbert, Matthew K; Majumdar, Rajtilak; Rajasekaran, Kanniah; Chen, Zhi-Yuan; Wei, Qijian; Sickler, Christine M; Lebar, Matthew D; Cary, Jeffrey W; Frame, Bronwyn R; Wang, Kan

2018-06-01

Expressing an RNAi construct in maize kernels that targets the gene for alpha-amylase in Aspergillus flavus resulted in suppression of alpha-amylase (amy1) gene expression and decreased fungal growth during in situ infection resulting in decreased aflatoxin production. Aspergillus flavus is a saprophytic fungus and pathogen to several important food and feed crops, including maize. Once the fungus colonizes lipid-rich seed tissues, it has the potential to produce toxic secondary metabolites, the most dangerous of which is aflatoxin. The pre-harvest control of A. flavus contamination and aflatoxin production is an area of intense research, which includes breeding strategies, biological control, and the use of genetically-modified crops. Host-induced gene silencing, whereby the host crop produces siRNA molecules targeting crucial genes in the invading fungus and targeting the gene for degradation, has shown to be promising in its ability to inhibit fungal growth and decrease aflatoxin contamination. Here, we demonstrate that maize inbred B104 expressing an RNAi construct targeting the A. flavus alpha-amylase gene amy1 effectively reduces amy1 gene expression resulting in decreased fungal colonization and aflatoxin accumulation in kernels. This work contributes to the development of a promising technology for reducing the negative economic and health impacts of A. flavus growth and aflatoxin contamination in food and feed crops.

Worldwide Emerging Environmental Issues Affecting the U.S. Military. Summarizing Environmental Security Monthly Scanning May 2005 - May 2006

DTIC Science & Technology

2006-05-01

breed of ‘refugee’ within international frameworks,” while Dr. Bogardi, Director of UNU’s Institute for Environment and Human Security in Bonn...Modified Organisms (GMOs) Continues FAO calls for an international framework for GM trees GM Crops Created Superweed Europe to Redouble Efforts to...avoid eventual damages to their crops , to protection of endangered species that need special habitat conditions. Enviromatics could impact

Review: Balancing Limiting Factors and Economic Drivers to Achieve Sustainable Midwestern US Agricultural Residue Feedstock Supplies

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wally W. Wilhelm; J. Richard Hess; Douglas L. Karlen

2010-10-01

Advanced biofuels will be developed using cellulosic feedstock rather than grain or oilseed crops that can also be used for food and feed. To be sustainable, these new agronomic production systems must be economically viable without degrading soil resources. This review examines six agronomic factors that collectively define many of the limits and opportunities for harvesting crop residue for biofuel feedstock. These six “limiting factors” are discussed in relationship to economic drivers associated with harvesting corn (Zea mays L.) stover as a potential cellulosic feedstock. The limiting factors include soil organic carbon, wind and water erosion, plant nutrient balance, soilmore » water and temperature dynamics, soil compaction, and off-site environmental impacts. Initial evaluations using the Revised Universal Soil Loss Equation 2.0 (RUSLE2) show that a single factor analysis based on simply meeting tolerable soil loss might indicate stover could be harvested sustainably, but the same analysis based on maintaining soil organic carbon shows the practice to be non-sustainable. Modifying agricultural management to include either annual or perennial cover crops is shown to meet both soil erosion and soil carbon requirements. The importance of achieving high yields and planning in a holistic manner at the landscape scale are also shown to be crucial for balancing limitations and drivers associated with renewable bioenergy production.« less

Magnetic fields: how is plant growth and development impacted?

PubMed

da Silva, Jaime A Teixeira; Dobránszki, Judit

2016-03-01

This review provides detailed insight on the effects of magnetic fields on germination, growth, development, and yield of plants focusing on ex vitro growth and development and discussing the possible physiological and biochemical responses. The MFs considered in this review range from the nanoTesla (nT) to geomagnetic levels, up to very strong MFs greater than 15 Tesla (T) and also super-weak MFs (near 0 T). The theoretical bases of the action of MFs on plant growth, which are complex, are not discussed here and thus far, there is limited mathematical background about the action of MFs on plant growth. MFs can positively influence the morphogenesis of several plants which allows them to be used in practical situations. MFs have thus far been shown to modify seed germination and affect seedling growth and development in a wide range of plants, including field, fodder, and industrial crops; cereals and pseudo-cereals; grasses; herbs and medicinal plants; horticultural crops (vegetables, fruits, ornamentals); trees; and model crops. This is important since MFs may constitute a non-residual and non-toxic stimulus. In addition to presenting and summarizing the effects of MFs on plant growth and development, we also provide possible physiological and biochemical explanations for these responses including stress-related responses of plants, explanations based on dia-, para-, and ferromagnetism, oriented movements of substances, and cellular and molecular changes.

Genetically modified soybeans and food allergies.

PubMed

Herman, Eliot M

2003-05-01

Allergenic reactions to proteins expressed in GM crops has been one of the prominent concerns among biotechnology critics and a concern of regulatory agencies. Soybeans like many plants have intrinsic allergens that present problems for sensitive people. Current GM crops, including soybean, have not been shown to add any additional allergenic risk beyond the intrinsic risks already present. Biotechnology can be used to characterize and eliminate allergens naturally present in crops. Biotechnology has been used to remove a major allergen in soybean demonstrating that genetic modification can be used to reduce allergenicity of food and feed. This provides a model for further use of GM approaches to eliminate allergens.

Estimating Agricultural Water Use using the Operational Simplified Surface Energy Balance Evapotranspiration Estimation Method

NASA Astrophysics Data System (ADS)

Forbes, B. T.

2015-12-01

Due to the predominantly arid climate in Arizona, access to adequate water supply is vital to the economic development and livelihood of the State. Water supply has become increasingly important during periods of prolonged drought, which has strained reservoir water levels in the Desert Southwest over past years. Arizona's water use is dominated by agriculture, consuming about seventy-five percent of the total annual water demand. Tracking current agricultural water use is important for managers and policy makers so that current water demand can be assessed and current information can be used to forecast future demands. However, many croplands in Arizona are irrigated outside of areas where water use reporting is mandatory. To estimate irrigation withdrawals on these lands, we use a combination of field verification, evapotranspiration (ET) estimation, and irrigation system qualification. ET is typically estimated in Arizona using the Modified Blaney-Criddle method which uses meteorological data to estimate annual crop water requirements. The Modified Blaney-Criddle method assumes crops are irrigated to their full potential over the entire growing season, which may or may not be realistic. We now use the Operational Simplified Surface Energy Balance (SSEBop) ET data in a remote-sensing and energy-balance framework to estimate cropland ET. SSEBop data are of sufficient resolution (30m by 30m) for estimation of field-scale cropland water use. We evaluate our SSEBop-based estimates using ground-truth information and irrigation system qualification obtained in the field. Our approach gives the end user an estimate of crop consumptive use as well as inefficiencies in irrigation system performance—both of which are needed by water managers for tracking irrigated water use in Arizona.

Effects of long-term feeding of genetically modified corn (event MON810) on the performance of lactating dairy cows.

PubMed

Steinke, K; Guertler, P; Paul, V; Wiedemann, S; Ettle, T; Albrecht, C; Meyer, H H D; Spiekers, H; Schwarz, F J

2010-10-01

A long-term study over 25 months was conducted to evaluate the effects of genetically modified corn on performance of lactating dairy cows. Thirty-six dairy cows were assigned to two feeding groups and fed with diets based on whole-crop silage, kernels and whole-crop cobs from Bt-corn (Bt-MON810) or its isogenic not genetically modified counterpart (CON) as main components. The study included two consecutive lactations. There were no differences in the chemical composition and estimated net energy content of Bt-MON810 and CON corn components and diets. CON feed samples were negative for the presence of Cry1Ab protein, while in Bt-MON810 feed samples the Cry1Ab protein was detected. Cows fed Bt-MON810 corn had a daily Cry1Ab protein intake of 6.0 mg in the first lactation and 6.1 mg in the second lactation of the trial. Dry matter intake (DMI) was 18.8 and 20.7 kg/cow per day in the first and the second lactation of the trial, with no treatment differences. Similarly, milk yield (23.8 and 29.0 kg/cow per day in the first and the second lactation of the trial) was not affected by dietary treatment. There were no consistent effects of feeding MON810 or its isogenic CON on milk composition or body condition. Thus, the present long-term study demonstrated the compositional and nutritional equivalence of Bt-MON810 and its isogenic CON. © 2010 Blackwell Verlag GmbH.

Noah-MP-Crop: Enhancing cropland representation in the community land surface modeling system

NASA Astrophysics Data System (ADS)

Liu, X.; Chen, F.; Barlage, M. J.; Zhou, G.; Niyogi, D.

2015-12-01

Croplands are important in land-atmosphere interactions and in modifying local and regional weather and climate. Despite their importance, croplands are poorly represented in the current version of the coupled Weather Research and Forecasting (WRF)/ Noah land-surface modeling system, resulting in significant surface temperature and humidity biases across agriculture- dominated regions of the United States. This study aims to improve the WRF weather forecasting and regional climate simulations during the crop growing season by enhancing the representation of cropland in the Noah-MP land model. We introduced dynamic crop growth parameterization into Noah-MP and evaluated the enhanced model (Noah-MP-Crop) at both the field and regional scales with multiple crop biomass datasets, surface fluxes and soil moisture/temperature observations. We also integrated a detailed cropland cover map into WRF, enabling the model to simulate corn and soybean field across the U.S. Great Plains. Results show marked improvement in the Noah-MP-Crop performance in simulating leaf area index (LAI), crop biomass, soil temperature, and surface fluxes. Enhanced cropland representation is not only crucial for improving weather forecasting but can also help assess potential impacts of weather variability on regional hydrometeorology and crop yields. In addition to its applications to WRF, Noah-MP-Crop can be applied in high-spatial-resolution regional crop yield modeling and drought assessments

Ecological Intensification Through Pesticide Reduction: Weed Control, Weed Biodiversity and Sustainability in Arable Farming.

PubMed

Petit, Sandrine; Munier-Jolain, Nicolas; Bretagnolle, Vincent; Bockstaller, Christian; Gaba, Sabrina; Cordeau, Stéphane; Lechenet, Martin; Mézière, Delphine; Colbach, Nathalie

2015-11-01

Amongst the biodiversity components of agriculture, weeds are an interesting model for exploring management options relying on the principle of ecological intensification in arable farming. Weeds can cause severe crop yield losses, contribute to farmland functional biodiversity and are strongly associated with the generic issue of pesticide use. In this paper, we address the impacts of herbicide reduction following a causal framework starting with herbicide reduction and triggering changes in (i) the management options required to control weeds, (ii) the weed communities and functions they provide and (iii) the overall performance and sustainability of the implemented land management options. The three components of this framework were analysed in a multidisciplinary project that was conducted on 55 experimental and farmer's fields that included conventional, integrated and organic cropping systems. Our results indicate that the reduction of herbicide use is not antagonistic with crop production, provided that alternative practices are put into place. Herbicide reduction and associated land management modified the composition of in-field weed communities and thus the functions of weeds related to biodiversity and production. Through a long-term simulation of weed communities based on alternative (?) cropping systems, some specific management pathways were identified that delivered high biodiversity gains and limited the negative impacts of weeds on crop production. Finally, the multi-criteria assessment of the environmental, economic and societal sustainability of the 55 systems suggests that integrated weed management systems fared better than their conventional and organic counterparts. These outcomes suggest that sustainable management could possibly be achieved through changes in weed management, along a pathway starting with herbicide reduction.

Ecological Intensification Through Pesticide Reduction: Weed Control, Weed Biodiversity and Sustainability in Arable Farming

NASA Astrophysics Data System (ADS)

Petit, Sandrine; Munier-Jolain, Nicolas; Bretagnolle, Vincent; Bockstaller, Christian; Gaba, Sabrina; Cordeau, Stéphane; Lechenet, Martin; Mézière, Delphine; Colbach, Nathalie

2015-11-01

Amongst the biodiversity components of agriculture, weeds are an interesting model for exploring management options relying on the principle of ecological intensification in arable farming. Weeds can cause severe crop yield losses, contribute to farmland functional biodiversity and are strongly associated with the generic issue of pesticide use. In this paper, we address the impacts of herbicide reduction following a causal framework starting with herbicide reduction and triggering changes in (i) the management options required to control weeds, (ii) the weed communities and functions they provide and (iii) the overall performance and sustainability of the implemented land management options. The three components of this framework were analysed in a multidisciplinary project that was conducted on 55 experimental and farmer's fields that included conventional, integrated and organic cropping systems. Our results indicate that the reduction of herbicide use is not antagonistic with crop production, provided that alternative practices are put into place. Herbicide reduction and associated land management modified the composition of in-field weed communities and thus the functions of weeds related to biodiversity and production. Through a long-term simulation of weed communities based on alternative (?) cropping systems, some specific management pathways were identified that delivered high biodiversity gains and limited the negative impacts of weeds on crop production. Finally, the multi-criteria assessment of the environmental, economic and societal sustainability of the 55 systems suggests that integrated weed management systems fared better than their conventional and organic counterparts. These outcomes suggest that sustainable management could possibly be achieved through changes in weed management, along a pathway starting with herbicide reduction.

Efficacy of genetically modified Bt toxins alone and in combinations against pink bollworm resistant to Cry1Ac and Cry2Ab

USDA-ARS?s Scientific Manuscript database

Evolution of resistance in pests threatens the long-term success of transgenic crops that produce insecticidal proteins from Bacillus thuringiensis (Bt). Previous work showed that genetically modified Bt toxins Cry1AbMod and Cry1AcMod effectively countered resistance to native Bt toxins Cry1Ab and ...

Comparative impact of genetically modified and non modified maize (Zea mays L.) on succeeding crop and associated weed.

PubMed

Ibrahim, Muhammad; Ahmed, Naseer; Ullah, Faizan; Shinwari, Zabta Khan; Bano, Asghari

2016-04-01

This research work documents the comparative impact of genetically modified (GM) (insect resistance) and non modified maize (Zea mays L.) on growth and germination of succeeding crop wheat (Triticum aestivum L.) and associated weed (Avena fatua L.). The aqueous extracts of both the GM and non-GM maize exhibited higher phenolic content than that of methanolic extracts. Germination percentage and germination index of wheat was significantly decreased by GM methanolic extract (10%) as well as that of non-GM maize at 3% aqueous extract. Similarly germination percentage of weed (Avena fatua L.) was significantly reduced by application of 3% and 5% methanolic GM extracts. All extracts of GM maize showed non-significant effect on the number of roots, root length and shoot length per plant but 5% and 10% methanolic extracts of non-GM maize significantly increased the number of roots per plant of wheat seedling. Similarly, 10% methanolic extract of GM maize significantly increased the number of roots per plant of weed seedling. Methanolic extracts of GM and non-GM maize (3% and 5%) significantly decreased the protease activity in wheat as compared to untreated control. © The Author(s) 2013.

On the rationale and interpretation of the Farm Scale Evaluations of genetically modified herbicide-tolerant crops.

PubMed Central

Squire, G R; Brooks, D R; Bohan, D A; Champion, G T; Daniels, R E; Haughton, A J; Hawes, C; Heard, M S; Hill, M O; May, M J; Osborne, J L; Perry, J N; Roy, D B; Woiwod, I P; Firbank, L G

2003-01-01

Farmland biodiversity and food webs were compared in conventional and genetically modified herbicide-tolerant (GMHT) crops of beet (Beta vulgaris L.), maize (Zea mays L.) and both spring and winter oilseed rape (Brassica napus L.). GMHT and conventional varieties were sown in a split-field experimental design, at 60-70 sites for each crop, spread over three starting years beginning in 2000. This paper provides a background to the study and the rationale for its design and interpretation. It shows how data on environment, field management and the biota are used to assess the current state of the ecosystem, to define the typical arable field and to devise criteria for selecting, sampling and auditing experimental sites in the Farm Scale Evaluations. The main functional and taxonomic groups in the habitat are ranked according to their likely sensitivity to GMHT cropping, and the most responsive target organisms are defined. The value of the seedbank as a baseline and as an indicator of historical trends is proposed. Evidence from experiments during the twentieth century is analysed to show that large changes in field management have affected sensitive groups in the biota by ca. 50% during a year or short run of years--a figure against which to assess any positive or negative effects of GMHT cropping. The analysis leads to a summary of factors that were, and were not, examined in the first 3 years of the study and points to where modelling can be used to extrapolate the effects to the landscape and the agricultural region. PMID:14561314

A risk-based classification scheme for genetically modified foods. II: Graded testing.

PubMed

Chao, Eunice; Krewski, Daniel

2008-12-01

This paper presents a graded approach to the testing of crop-derived genetically modified (GM) foods based on concern levels in a proposed risk-based classification scheme (RBCS) and currently available testing methods. A graded approach offers the potential for more efficient use of testing resources by focusing less on lower concern GM foods, and more on higher concern foods. In this proposed approach to graded testing, products that are classified as Level I would have met baseline testing requirements that are comparable to what is widely applied to premarket assessment of GM foods at present. In most cases, Level I products would require no further testing, or very limited confirmatory analyses. For products classified as Level II or higher, additional testing would be required, depending on the type of the substance, prior dietary history, estimated exposure level, prior knowledge of toxicity of the substance, and the nature of the concern related to unintended changes in the modified food. Level III testing applies only to the assessment of toxic and antinutritional effects from intended changes and is tailored to the nature of the substance in question. Since appropriate test methods are not currently available for all effects of concern, future research to strengthen the testing of GM foods is discussed.

A screening method for the detection of the 35S promoter and the nopaline synthase terminator in genetically modified organisms in a real-time multiplex polymerase chain reaction using high-resolution melting-curve analysis.

PubMed

Akiyama, Hiroshi; Nakamura, Fumi; Yamada, Chihiro; Nakamura, Kosuke; Nakajima, Osamu; Kawakami, Hiroshi; Harikai, Naoki; Furui, Satoshi; Kitta, Kazumi; Teshima, Reiko

2009-11-01

To screen for unauthorized genetically modified organisms (GMO) in the various crops, we developed a multiplex real-time polymerase chain reaction high-resolution melting-curve analysis method for the simultaneous qualitative detection of 35S promoter sequence of cauliflower mosaic virus (35SP) and the nopaline synthase terminator (NOST) in several crops. We selected suitable primer sets for the simultaneous detection of 35SP and NOST and designed the primer set for the detection of spiked ColE1 plasmid to evaluate the validity of the polymerase chain reaction (PCR) analyses. In addition, we optimized the multiplex PCR conditions using the designed primer sets and EvaGreen as an intercalating dye. The contamination of unauthorized GMO with single copy similar to NK603 maize can be detected as low as 0.1% in a maize sample. Furthermore, we showed that the present method would be applicable in identifying GMO in various crops and foods like authorized GM soybean, authorized GM potato, the biscuit which is contaminated with GM soybeans and the rice which is contaminated with unauthorized GM rice. We consider this method to be a simple and reliable assay for screening for unauthorized GMO in crops and the processing food products.

Genetically modified myths and realities.

PubMed

Parrott, Wayne

2010-11-30

Myths abound when it comes to GE crops. At their worst, myths play an active role in discouraging the use of GE to solve problems that afflict humankind, such as malnutrition and birth defects. Of all the various myths, two have been particularly important in preventing the use of GE maize in its areas of origin. The first is that transgenic maize will contaminate and destroy land races, thus destroying biodiversity and its associated cultural traditions. This myth totally ignores the fact that the gene flow that has taken place between maize and its progenitor, between the land races, and between land races and modern hybrids, has not led to any dire consequences. The second myth is that crops are natural and have not been modified by humans, or if they have, that plant breeding does not alter DNA. This myth ignores the fact that for the most part, it is impossible to alter the appearance of crops without changing the DNA. In fact, DNA movement within the crop genome is normal and its movement leads to double-strand DNA repair, with results like those found around transgene insertion sites. In addition, plants have ways to create novel genes. These changes help plants adapt to evolution and to human selection. The net result is that changes similar to what happens during the production of engineered plants takes place anyway in plant genomes. Copyright © 2010 Elsevier B.V. All rights reserved.

Foliar Spray with Vermiwash Modifies the Arbuscular Mycorrhizal Dependency and Nutrient Stoichiometry of Bhut Jolokia (Capsicum assamicum)

PubMed Central

Gupta, Rajeev; Veer, Vijay; Singh, Lokendra; Kalita, Mohan C.

2014-01-01

Vermiwash (VW), a liquid extract obtained from vermicomposting beds, is used as an organic fertilizer for crop plants. The current study investigated the effect of a vermiwash foliar spray on the response of bhut jolokia (Capsicum assamicum) exposed to two different arbuscular mycorrhizal fungi (AMF: Rhizophagus irregularis, RI and G. mosseae, GM) in acidic soil under naturally ventilated greenhouse conditions. The VW spray significantly influenced the growth of plants receiving the dual treatment of AMF+VW. Plant growth was more prominent in the GM+VW treatment group than that in the RI+VW treatment group. The plant-AMF interactions in relation to growth and nutrient requirements were also significantly influenced by the application of VW. Interestingly, the VW treatment appeared to contribute more N to plants when compared to that under the AMF treatment, which led to changes in the C:N:P stoichiometry in plant shoots. Furthermore, the increased potassium dependency, as observed in the case of the dual treatments, suggests the significance of such treatments for improving crop conditions under salt stress. Overall, our study shows that the VW foliar spray modifies the response of a crop to inoculations of different AMF with regard to growth and nutrient utilization, which has implications for the selection of an efficient combination of nutrient source for improving crop growth. PMID:24651577

Metabolic engineering of plant-derived (E)-β-farnesene synthase genes for a novel type of aphid-resistant genetically modified crop plants.

PubMed

Yu, Xiu-Dao; Pickett, John; Ma, You-Zhi; Bruce, Toby; Napier, Johnathan; Jones, Huw D; Xia, Lan-Qin

2012-05-01

Aphids are major agricultural pests that cause significant yield losses of crop plants each year. Excessive dependence on insecticides for long-term aphid control is undesirable because of the development of insecticide resistance, the potential negative effects on non-target organisms and environmental pollution. Transgenic crops engineered for resistance to aphids via a non-toxic mode of action could be an efficient alternative strategy. (E)-β-Farnesene (EβF) synthases catalyze the formation of EβF, which for many pest aphids is the main component of the alarm pheromone involved in the chemical communication within these species. EβF can also be synthesized by certain plants but is then normally contaminated with inhibitory compounds. Engineering of crop plants capable of synthesizing and emitting EβF could cause repulsion of aphids and also the attraction of natural enemies that use EβF as a foraging cue, thus minimizing aphid infestation. In this review, the effects of aphids on host plants, plants' defenses against aphid herbivory and the recruitment of natural enemies for aphid control in an agricultural setting are briefly introduced. Furthermore, the plant-derived EβF synthase genes cloned to date along with their potential roles in generating novel aphid resistance via genetically modified approaches are discussed. © 2012 Institute of Botany, Chinese Academy of Sciences.

Ethical reflections on herbicide-resistant crops.

PubMed

Madsen, Kathrine Hauge; Sandøe, Peter

2005-03-01

The introduction of genetically modified (GM) crops has caused a fierce public debate in Europe. Much of the controversy centres on possible risks to the environment. A specific problem here is that risk perception of the scientific experts differs from that of the public. In this paper, risks associated with herbicide-resistant crops are presented from the point of view of experts and lay people. In the public perception, herbicide-resistant (HR) crops are troublesome because of their association with two technologies: genetic engineering of crops and the use of herbicides. These technologies are perceived as risky because they seem to share certain features: in particular, their long-term effects are unknown and they are dreaded. Other value questions also come into play. The public seems to be concerned that risks are not outweighed by usefulness, that using HR crops is the wrong path to sustainable agriculture, that the individual's right to choose GM-free products may be violated, and that these crops are unnatural. In contrast, on the issue of the uncertainty inherent in risk assessment, experts and the public seem to share a good deal of ground. Copyright 2005 Society of Chemical Industry

A geospatial suitability model for drought-tolerant switchgrass

NASA Astrophysics Data System (ADS)

Lewis, S. M.; Kelly, M.

2011-12-01

A perennial grass native to the North America, switchgrass (Panicum virgatum) has been targeted by the USDA as a model mass bioenergy crop to replace petroleum energy products and meet policy demands. Although highly water use efficient, as a warm-season crop, switchgrass requires a significant amount of water during the growing season (April -September). However, locations that have highly reliable water availability are also ideal for profitable food crops (e.g. corn and soy growing regions) and food competition is a significant concern in regards to biofuel crops being grown on productive agricultural lands. Drier, marginal lands (lands on which normal agricultural crops are difficult to cultivate) are therefore potentially ideal locations to grow biofuel crops to ensure that food competition is not an issue. Genetics scientists at UC Davis are in the process of developing a modified variety of switchgrass that can withstand extended periods of drought while not substantially affecting overall yield. As this product is being developed, it is important to identify the potential geographical niche for this new drought-tolerant variety of switchgrass. This project introduces a geospatial approach that utilizes both physical and economic variables to identify ideal geographic locations for this innovative crop.

Analysis of the community compositions of rhizosphere fungi in soybeans continuous cropping fields.

PubMed

Bai, Li; Cui, Jiaqi; Jie, Weiguang; Cai, Baiyan

2015-11-01

We used rhizosphere soil sampled from one field during zero year and two years of continuous cropping of high-protein soybean to analyze the taxonomic community compositions of fungi during periods of high-incidence of root rot. Our objectives were to identify the dominant pathogens in order to provide a theoretical basis for the study of pathogenesis as well as control tactics for soybean root rot induced by continuous cropping. A total of 17,801 modified internal transcribed spacer (ITS) sequences were obtained from three different soybean rhizosphere soil samples after zero year and 1 or 2 years of continuous cropping using 454 high-throughput sequencing. The dominant eumycote fungal were identified to be Ascomycota and Basidiomycota in the three soil samples. Continuous cropping of soybean affected the diversity of fungi in rhizosphere soils and increased the abundance of Thelebolus and Mortierellales significantly. Thanatephorus, Fusarium, and Alternaria were identified to be the dominant pathogenic fungal genera in rhizosphere soil from continuously cropped soybean fields. Copyright © 2015 Elsevier GmbH. All rights reserved.

The benefits of herbicide-resistant crops.

PubMed

Green, Jerry M

2012-10-01

Since 1996, genetically modified herbicide-resistant crops, primarily glyphosate-resistant soybean, corn, cotton and canola, have helped to revolutionize weed management and have become an important tool in crop production practices. Glyphosate-resistant crops have enabled the implementation of weed management practices that have improved yield and profitability while better protecting the environment. Growers have recognized their benefits and have made glyphosate-resistant crops the most rapidly adopted technology in the history of agriculture. Weed management systems with glyphosate-resistant crops have often relied on glyphosate alone, have been easy to use and have been effective, economical and more environmentally friendly than the systems they have replaced. Glyphosate has worked extremely well in controlling weeds in glyphosate-resistant crops for more than a decade, but some key weeds have evolved resistance, and using glyphosate alone has proved unsustainable. Now, growers need to renew their weed management practices and use glyphosate with other cultural, mechanical and herbicide options in integrated systems. New multiple-herbicide-resistant crops with resistance to glyphosate and other herbicides will expand the utility of existing herbicide technologies and will be an important component of future weed management systems that help to sustain the current benefits of high-efficiency and high-production agriculture. Copyright © 2012 Society of Chemical Industry.

An overview of crop growing condition monitoring in China agriculture remote sensing monitoring system

NASA Astrophysics Data System (ADS)

Huang, Qing; Zhou, Qing-bo; Zhang, Li

2009-07-01

China is a large agricultural country. To understand the agricultural production condition timely and accurately is related to government decision-making, agricultural production management and the general public concern. China Agriculture Remote Sensing Monitoring System (CHARMS) can monitor crop acreage changes, crop growing condition, agriculture disaster (drought, floods, frost damage, pest etc.) and predict crop yield etc. quickly and timely. The basic principles, methods and regular operation of crop growing condition monitoring in CHARMS are introduced in detail in the paper. CHARMS can monitor crop growing condition of wheat, corn, cotton, soybean and paddy rice with MODIS data. An improved NDVI difference model was used in crop growing condition monitoring in CHARMS. Firstly, MODIS data of every day were received and processed, and the max NDVI values of every fifteen days of main crop were generated, then, in order to assessment a certain crop growing condition in certain period (every fifteen days, mostly), the system compare the remote sensing index data (NDVI) of a certain period with the data of the period in the history (last five year, mostly), the difference between NDVI can indicate the spatial difference of crop growing condition at a certain period. Moreover, Meteorological data of temperature, precipitation and sunshine etc. as well as the field investigation data of 200 network counties were used to modify the models parameters. Last, crop growing condition was assessment at four different scales of counties, provinces, main producing areas and nation and spatial distribution maps of crop growing condition were also created.

Environmental impacts of genetically modified (GM) crop use 1996–2015: Impacts on pesticide use and carbon emissions

PubMed Central

Brookes, Graham

2017-01-01

ABSTRACT This paper updates previous assessments of important environmental impacts associated with using crop biotechnology in global agriculture. It focuses on the environmental impacts associated with changes in pesticide use and greenhouse gas emissions arising from the use of GM crops since their first widespread commercial use in the mid-1990s. The adoption of GM insect resistant and herbicide tolerant technology has reduced pesticide spraying by 618.7 million kg (−8.1%) and, as a result, decreased the environmental impact associated with herbicide and insecticide use on these crops (as measured by the indicator, the Environmental Impact Quotient (EIQ)) by18.6%. The technology has also facilitated important cuts in fuel use and tillage changes, resulting in a significant reduction in the release of greenhouse gas emissions from the GM cropping area. In 2015, this was equivalent to removing 11.9 million cars from the roads. PMID:28414252

Environmental impacts of genetically modified (GM) crop use 1996–2014: Impacts on pesticide use and carbon emissions

PubMed Central

Brookes, Graham; Barfoot, Peter

2016-01-01

ABSTRACT This paper updates previous assessments of important environmental impacts associated with using crop biotechnology in global agriculture. It focuses on the environmental impacts associated with changes in pesticide use and greenhouse gas emissions arising from the use of GM crops since their first widespread commercial use in the mid 1990s. The adoption of GM insect resistant and herbicide tolerant technology has reduced pesticide spraying by 581.4 million kg (−8.2%) and, as a result, decreased the environmental impact associated with herbicide and insecticide use on these crops (as measured by the indicator, the Environmental Impact Quotient [EIQ]) by18.5%. The technology has also facilitated important cuts in fuel use and tillage changes, resulting in a significant reduction in the release of greenhouse gas emissions from the GM cropping area. In 2014, this was equivalent to removing nearly 10 million cars from the roads. PMID:27253265

Green Planet Architecture - A Methodology for Self-Sustainable Distributed Renewable Energy Ecosystems

NASA Technical Reports Server (NTRS)

Saxena, Nikita T.; Thomas, Anna E.; Johnson, Shawana; Venners, John P.; Hendricks, Robert C.

2012-01-01

Our planet has been endowed with a host of natural mechanisms to keep the environment and climate in balance. Humans are now facing the need to restore this balance that has been upset in the past years because of a growing population and resource demands. To steer dependency away from freshwater crops and decrease environmental damage from humanity s fuel and energy demands, it is necessary to take advantage of the natural adaptive biomass resources that are already in place. Using methods of Green Planet Architecture, based on compilations of current research and procedures, could lead to new forms of energy and fueling as well as new sources for food and feed. Green Planet Architecture involves climatic adaptive biomass; geospatial intelligence; agri- and aqua-culture life cycles; and soil, wetland, and shoreline restoration. Plants such as Salicornia, seashore mallow, castor, mangroves, and perhaps Moringa can be modified (natural, model-assisted, or genetically modified) to thrive in salt-water and brackish water or otherwise not arable conditions, making them potentially new crops that will not displace traditional farming. These fueling sources also have potential to be used in other rapid-growth industries, such as the aviation industry, that have incentive to move towards more sustainable fuel supplies. This paper highlights an example of how synergistic development of biomass resources and geospatial intelligence high-performance computing capabilities can be focused to resolve potential drought-famine problems. These techniques, provide a basis for future e-science-based discovery (and access) through technology that can be expanded to support global societal applications.

A risk-based classification scheme for genetically modified foods. III: Evaluation using a panel of reference foods.

PubMed

Chao, Eunice; Krewski, Daniel

2008-12-01

This paper presents an exploratory evaluation of four functional components of a proposed risk-based classification scheme (RBCS) for crop-derived genetically modified (GM) foods in a concordance study. Two independent raters assigned concern levels to 20 reference GM foods using a rating form based on the proposed RBCS. The four components of evaluation were: (1) degree of concordance, (2) distribution across concern levels, (3) discriminating ability of the scheme, and (4) ease of use. At least one of the 20 reference foods was assigned to each of the possible concern levels, demonstrating the ability of the scheme to identify GM foods of different concern with respect to potential health risk. There was reasonably good concordance between the two raters for the three separate parts of the RBCS. The raters agreed that the criteria in the scheme were sufficiently clear in discriminating reference foods into different concern levels, and that with some experience, the scheme was reasonably easy to use. Specific issues and suggestions for improvements identified in the concordance study are discussed.

Assessment of real-time PCR based methods for quantification of pollen-mediated gene flow from GM to conventional maize in a field study.

PubMed

Pla, Maria; La Paz, José-Luis; Peñas, Gisela; García, Nora; Palaudelmàs, Montserrat; Esteve, Teresa; Messeguer, Joaquima; Melé, Enric

2006-04-01

Maize is one of the main crops worldwide and an increasing number of genetically modified (GM) maize varieties are cultivated and commercialized in many countries in parallel to conventional crops. Given the labeling rules established e.g. in the European Union and the necessary coexistence between GM and non-GM crops, it is important to determine the extent of pollen dissemination from transgenic maize to other cultivars under field conditions. The most widely used methods for quantitative detection of GMO are based on real-time PCR, which implies the results are expressed in genome percentages (in contrast to seed or grain percentages). Our objective was to assess the accuracy of real-time PCR based assays to accurately quantify the contents of transgenic grains in non-GM fields in comparison with the real cross-fertilization rate as determined by phenotypical analysis. We performed this study in a region where both GM and conventional maize are normally cultivated and used the predominant transgenic maize Mon810 in combination with a conventional maize variety which displays the characteristic of white grains (therefore allowing cross-pollination quantification as percentage of yellow grains). Our results indicated an excellent correlation between real-time PCR results and number of cross-fertilized grains at Mon810 levels of 0.1-10%. In contrast, Mon810 percentage estimated by weight of grains produced less accurate results. Finally, we present and discuss the pattern of pollen-mediated gene flow from GM to conventional maize in an example case under field conditions.

Current methods for assessing safety of genetically modified crops as exemplified by data on Roundup Ready soybeans.

PubMed

Nair, Rashmi S; Fuchs, Roy L; Schuette, Sheila A

2002-01-01

Several laboratories have used recombinant DNA technology in plant breeding to improve compositional, processing, and agronomic characteristics of plants. These transformed plants have been extensively tested in field trials, have gained full regulatory approvals and are currently being marketed in a number of countries around the world. This paper briefly summarizes the approach used to assure the safety of foods and feeds derived from these genetically modified crops, as exemplified by data on Roundup Ready soybeans that has been developed by Monsanto Company using biotechnology in order to confer tolerance to glyphosate, the active ingredient in Roundup herbicide, by the production of the CP4 enolpyruvylshikimate-3-phosphate synthase protein. The results of the studies demonstrate that Roundup Ready soybeans are as safe as traditional soybeans with respect to food and feed safety.

The economic and environmental cost of delayed GM crop adoption: The case of Australia's GM canola moratorium.

PubMed

Biden, Scott; Smyth, Stuart J; Hudson, David

2018-01-02

Incorporating socio-economic considerations (SECs) into national biosafety regulations regarding genetically modified (GM) crops have opportunity costs. Australia approved the cultivation of GM canola through a science-based risk assessment in 2003, but allowed state moratoria to be instituted based on potential trade impacts over the period 2004 to 2008 and 2010 in the main canola growing states. This analysis constructs a counterfactual assessment using Canadian GM canola adoption data to create an S-Curve of adoption in Australia to measure the environmental and economic opportunity costs of Australia's SEC-based moratoria between 2004 and 2014. The environmental impacts are measured through the amount of chemical active ingredients applied during pest management, the Environmental Impact Quotient indicator, and greenhouse gas emissions. The economic impacts are measured through the variable costs of the weed control programs, yield and the contribution margin. The environmental opportunity costs from delaying the adoption of GM canola in Australia include an additional 6.5 million kilograms of active ingredients applied to canola land; a 14.3% increase in environmental impact to farmers, consumers and the ecology; 8.7 million litres of diesel fuel burned; and an additional 24.2 million kilograms of greenhouse gas (GHG) and compound emissions released. The economic opportunity costs of the SEC-based moratoria resulted in foregone output of 1.1 million metric tonnes of canola and a net economic loss to canola farmers' of AU$485.6 million. The paper provides some of the first quantified, post-adoption evidence on the opportunity cost and environmental impacts of incorporating SECs into GM crop regulation.

Hydrology of a zero-order Southern Piedmont watershed through 45 years of changing agricultural land use. Part 1. Monthly and seasonal rainfall-runoff relationships

NASA Astrophysics Data System (ADS)

Endale, Dinku M.; Fisher, Dwight S.; Steiner, Jean L.

2006-01-01

Few studies have reported runoff from small agricultural watersheds over sufficiently long period so that the effect of different cover types on runoff can be examined. We analyzed 45-yrs of monthly and annual rainfall-runoff characteristics of a small (7.8 ha) zero-order typical Southern Piedmont watershed in southeastern United States. Agricultural land use varied as follows: 1. Row cropping (5-yrs); 2. Kudzu ( Pueraria lobata; 5-yrs); 3. Grazed kudzu and rescuegrass ( Bromus catharticus; 7-yrs); and 4. Grazed bermudagrass and winter annuals ( Cynodon dactylon; 28-yrs). Land use and rainfall variability influenced runoff characteristics. Row cropping produced the largest runoff amount, percentage of the rainfall partitioned into runoff, and peak flow rates. Kudzu reduced spring runoff and almost eliminated summer runoff, as did a mixture of kudzu and rescuegrass (KR) compared to row cropping. Peak flow rates were also reduced during the kudzu and KR. Peak flow rates increased under bermudagrass but were lower than during row cropping. A simple process-based 'tanh' model modified to take the previous month's rainfall into account produced monthly rainfall and runoff correlations with coefficient of determination ( R2) of 0.74. The model was tested on independent data collected during drought. Mean monthly runoff was 1.65 times the observed runoff. Sustained hydrologic monitoring is essential to understanding long-term rainfall-runoff relationships in agricultural watersheds.

Ex-Ante Economic Impact Assessment of Genetically Modified Banana Resistant to Xanthomonas Wilt in the Great Lakes Region of Africa.

PubMed

Ainembabazi, John Herbert; Tripathi, Leena; Rusike, Joseph; Abdoulaye, Tahirou; Manyong, Victor

2015-01-01

Credible empirical evidence is scanty on the social implications of genetically modified (GM) crops in Africa, especially on vegetatively propagated crops. Little is known about the future success of introducing GM technologies into staple crops such as bananas, which are widely produced and consumed in the Great Lakes Region of Africa (GLA). GM banana has a potential to control the destructive banana Xanthomonas wilt disease. To gain a better understanding of future adoption and consumption of GM banana in the GLA countries which are yet to permit the production of GM crops; specifically, to evaluate the potential economic impacts of GM cultivars resistant to banana Xanthomonas wilt disease. The paper uses data collected from farmers, traders, agricultural extension agents and key informants in the GLA. We analyze the perceptions of the respondents about the adoption and consumption of GM crop. Economic surplus model is used to determine future economic benefits and costs of producing GM banana. On the release of GM banana for commercialization, the expected initial adoption rate ranges from 21 to 70%, while the ceiling adoption rate is up to 100%. Investment in the development of GM banana is economically viable. However, aggregate benefits vary substantially across the target countries ranging from US$ 20 million to 953 million, highest in countries where disease incidence and production losses are high, ranging from 51 to 83% of production. The findings support investment in the development of GM banana resistant to Xanthomonas wilt disease. The main beneficiaries of this technology development are farmers and consumers, although the latter benefit more than the former from reduced prices. Designing a participatory breeding program involving farmers and consumers signifies the successful adoption and consumption of GM banana in the target countries.

Modifying agricultural crops for improved nutrition.

PubMed

McGloughlin, Martina Newell

2010-11-30

The first generation of biotechnology products commercialized were crops focusing largely on input agronomic traits whose value was often opaque to consumers. The coming generations of crop plants can be grouped into four broad areas each presenting what, on the surface, may appear as unique challenges and opportunities. The present and future focus is on continuing improvement of agronomic traits such as yield and abiotic stress resistance in addition to the biotic stress tolerance of the present generation; crop plants as biomass feedstocks for biofuels and "bio-synthetics"; value-added output traits such as improved nutrition and food functionality; and plants as production factories for therapeutics and industrial products. From a consumer perspective, the focus on value-added traits, especially improved nutrition, is undoubtedly one of the areas of greatest interest. From a basic nutrition perspective, there is a clear dichotomy in demonstrated need between different regions and socioeconomic groups, the starkest being inappropriate consumption in the developed world and under-nourishment in Less Developed Countries (LDCs). Dramatic increases in the occurrence of obesity and related ailments in affluent regions are in sharp contrast to chronic malnutrition in many LDCs. Both problems require a modified food supply, and the tools of biotechnology have a part to play. Developing plants with improved traits involves overcoming a variety of technical, regulatory and indeed perception hurdles inherent in perceived and real challenges of complex traits modifications. Continuing improvements in molecular and genomic technologies are contributing to the acceleration of product development to produce plants with the appropriate quality traits for the different regions and needs. Crops with improved traits in the pipeline, the evolving technologies and the opportunities and challenges that lie ahead are covered. Copyright © 2010. Published by Elsevier B.V.

Risks of allergic reactions to biotech proteins in foods: perception and reality.

PubMed

Lehrer, S B; Bannon, G A

2005-05-01

In recent years, significant attention has been paid to the use of biotechnology to improve the quality and quantity of the food supply due in part to the projected growth in the world population, plus limited options available for increasing the amount of land under cultivation. Alterations in the food supply induced by classical breeding and selection methods typically involve the movement of large portions of genomic DNA between different plant varieties to obtain the desired trait. This is in contrast to techniques of genetic engineering which allows the selection and transfers specific genes from one species to another. The primary allergy risk to consumers from genetically modified crops may be placed into one of three categories. The first represents the highest risk to the allergic consumer is the transfer of known allergen or cross-reacting allergen into a food crop. The second category, representing an intermediate risk to the consumer, is the potential for replacing the endogenous allergenicity of a genetically-modified crop. The last category involves expression of novel proteins that may become allergens in man and generally represents a relatively low risk to the consumer, although this possibility has received attention of late. In order to mitigate the three categories of potential allergy risk associated with biotech crops, all genes introduced into food crops undergo a series of tests designed to determine if the biotech protein exhibits properties of known food allergens. The result of this risk assessment process to date is that no biotech proteins in foods have been documented to cause allergic reactions. These results indicate that the current assessment process is robust, although as science of allergy and allergens evolves, new information and new technology should help further the assessment process for potential allergenicity.

The consequences of land-cover changes on soil erosion distribution in Slovakia

NASA Astrophysics Data System (ADS)

Cebecauer, Tomáš; Hofierka, Jaroslav

2008-06-01

Soil erosion is a complex process determined by mutual interaction of numerous factors. The aim of erosion research at regional scales is a general evaluation of the landscape susceptibility to soil erosion by water, taking into account the main factors influencing this process. One of the key factors influencing the susceptibility of a region to soil erosion is land cover. Natural as well as human-induced changes of landscape may result in both the diminishment and acceleration of soil erosion. Recent studies of land-cover changes indicate that during the last decade more than 4.11% of Slovak territory has changed. The objective of this study is to assess the influence of land-cover and crop rotation changes over the 1990-2000 period on the intensity and spatial pattern of soil erosion in Slovakia. The assessment is based on principles defined in the Universal Soil Loss Equation (USLE) modified for application at regional scale and the use of the CORINE land cover (CLC) databases for 1990 and 2000. The C factor for arable land has been refined using statistical data on the mean crop rotation and the acreage of particular agricultural crops in the districts of Slovakia. The L factor has been calculated using sample areas with parcels identified by LANDSAT TM data. The results indicate that the land-cover and crop rotation changes had a significant influence on soil erosion pattern predominately in the hilly and mountainous parts of Slovakia. The pattern of soil erosion changes exhibits high spatial variation with overall slightly decreased soil erosion risks. These changes are associated with ongoing land ownership changes, changing structure of crops, deforestation and afforestation.

Classifying unresolved objects from simulated space data.

NASA Technical Reports Server (NTRS)

Nalepka, R. F.; Hyde, P. D.

1973-01-01

A multispectral scanner data set gathered at a flight altitude of 10,000 ft. over an agricultural area was modified to simulate the spatial resolution of the spacecraft scanners. Signatures were obtained for several major crops and their proportions were estimated over a large area. For each crop, a map was generated to show its approximate proportion in each resolution element, and hence its distribution over the area of interest. A statistical criterion was developed to identify data points that may not represent a mixture of the specified crops. This allows for great reduction in the effect of unknown or alien objects on the estimated proportions. This criterion can be used to locate special features, such as roads or farm houses. Preliminary analysis indicates a high level of consistency between estimated proportions and available ground truth. Large concentrations of major crops show up especially well on the maps.

Regulating transgenic crops sensibly: lessons from plant breeding, biotechnology and genomics.

PubMed

Bradford, Kent J; Van Deynze, Allen; Gutterson, Neal; Parrott, Wayne; Strauss, Steven H

2005-04-01

The costs of meeting regulatory requirements and market restrictions guided by regulatory criteria are substantial impediments to the commercialization of transgenic crops. Although a cautious approach may have been prudent initially, we argue that some regulatory requirements can now be modified to reduce costs and uncertainty without compromising safety. Long-accepted plant breeding methods for incorporating new diversity into crop varieties, experience from two decades of research on and commercialization of transgenic crops, and expanding knowledge of plant genome structure and dynamics all indicate that if a gene or trait is safe, the genetic engineering process itself presents little potential for unexpected consequences that would not be identified or eliminated in the variety development process before commercialization. We propose that as in conventional breeding, regulatory emphasis should be on phenotypic rather than genomic characteristics once a gene or trait has been shown to be safe.

Electrochemical sensor for multiplex screening of genetically modified DNA: identification of biotech crops by logic-based biomolecular analysis.

PubMed

Liao, Wei-Ching; Chuang, Min-Chieh; Ho, Ja-An Annie

2013-12-15

Genetically modified (GM) technique, one of the modern biomolecular engineering technologies, has been deemed as profitable strategy to fight against global starvation. Yet rapid and reliable analytical method is deficient to evaluate the quality and potential risk of such resulting GM products. We herein present a biomolecular analytical system constructed with distinct biochemical activities to expedite the computational detection of genetically modified organisms (GMOs). The computational mechanism provides an alternative to the complex procedures commonly involved in the screening of GMOs. Given that the bioanalytical system is capable of processing promoter, coding and species genes, affirmative interpretations succeed to identify specified GM event in terms of both electrochemical and optical fashions. The biomolecular computational assay exhibits detection capability of genetically modified DNA below sub-nanomolar level and is found interference-free by abundant coexistence of non-GM DNA. This bioanalytical system, furthermore, sophisticates in array fashion operating multiplex screening against variable GM events. Such a biomolecular computational assay and biosensor holds great promise for rapid, cost-effective, and high-fidelity screening of GMO. Copyright © 2013 Elsevier B.V. All rights reserved.

The Future Can’t Wait

DTIC Science & Technology

2013-09-01

following the traditional model of development assistance. Although there can be no objective rubric ...suggests “corporations are people?” Is there a path to higher agricultural productivity, other than genetically modifying crops whose seeds do not

BIOTECHNOLOGY/ECORISK

EPA Science Inventory

This research effort is designed to provide the risk assessment community with modern genetic tools for evaluating long-term risks of genetically modified (GM) crops. Molecular population genetic data can potentially reveal information about long-term trends in both pest populat...

Integrating biological treatment of crop residue into a hydroponic sweetpotato culture

NASA Astrophysics Data System (ADS)

Trotman, A. A.; David, P. P.; Bonsi, C. K.; Hill, W. A.; Mortley, D. G.; Loretan, P. A.

1997-01-01

Residual biomass from hydroponic culture of sweetpotato [Ipomoea batatas (L.) Lam.] was degraded using natural bacterial soil isolates. Sweetpotato was grown for 120 days in hydroponic culture with a nutrient solution comprised of a ratio of 80% modified half Hoagland solution to 20% filtered effluent from an aerobic starch hydrolysis bioreactor. The phytotoxicity of the effluent was assayed with `Waldmann's Green' lettuce (Lactuca sativa L.) and the ratio selected after a 60-day bioassay using sweetpotato plants propagated vegetatively from cuttings. Controlled environment chamber experiments were conducted to investigate the impact of filtrate from biological treatment of crop residue on growth and storage root production with plants grown in a modified half Hoagland solution. Incorporation of bioreactor effluent, reduced storage root yield of `Georgia Jet' sweetpotato but the decrease was not statistically significant when compared with yield for plants cultured in a modified half Hoagland solution without filtrate. However, yield of `TU-82-155' sweetpotato was significantly reduced when grown in a modified half Hoagland solution into which filtered effluent had been incorporated. Total biomass was significantly reduced for both sweetpotato cultivars when grown in bioreactor effluent. The leaf area and dry matter accumulation were significantly (P < 0.05) reduced for both cultivars when grown in solution culture containing 20% filtered effluent.

Bt crops: predicting effects of escaped transgenes on the fitness of wild plants and their herbivores.

PubMed

Letourneau, Deborah K; Robinson, Gaden S; Hagen, Joy A

2003-01-01

One prominent concern about genetically modified crops is the possibility of environmental impacts from the movement of fitness-enhancing traits to wild plant populations. Decisions to deregulate Bt crops in the USA have relied strongly on arguments that these crops will not interbreed with wild relatives in the permitted growing regions. Limited attention therefore has been directed to analyses of the consequences of gene flow. To provide a transparent evaluation process for risks associated with insecticidal transgene escape, we crafted a series of questions designed to guide this aspect of the risk assessment. We then explored the current knowledge base available for answering such risk-related questions for three Bt crops (cotton, rapeseed, and rice). First, we generated a list of wild relatives of these crops. A definitive list of potential transgene recipients is not yet possible for some crops. Sufficient data are not available for some crops to eliminate certain related plant species from consideration of fertile hybrid formation, thus making lists for these crops subject to speculation. Second, we queried the HOSTS database (UK) to obtain a worldwide listing of lepidopteran species that feed on these crops and their wild relatives, and to determine the host range of the larvae. To our knowledge, this list of 502 lepidopteran species is the first such list published for these crops and wild crop relatives. Third, we used a data set maintained by the Canadian Forest Service to assess Bt toxin susceptibility for these lepidopterans. Only 3% of those species have been tested for susceptibility; and the literature suggests that generalizations about susceptibility among taxa are difficult due to the variability within families. Fourth, we consulted the literature to interpret what is known about the ability of lepidopterans to regulate plant fitness or invasiveness. We could not eliminate the possibility of ecological release due to plant resistance against lepidopterans. In fact, there is strong experimental evidence that lepidopteran herbivores do limit the distribution and/or abundances of at least some wild plant species. Neither could we eliminate the possibility that non-target lepidopterans might have important functions in the ecosystem as pollinators or alternate hosts to natural enemies of pest species. This study suggests that crucial data are lacking for the development of a credible scientific basis to confirm or deny environmental risks associated with the escape of Bt transgene constructs to wild relatives. Given the absence of information on the identity, level of susceptibility, and ecological roles of lepidopterans exploiting specific wild relatives of Bt crops, we suggest that new efforts be directed to assessing possible consequences of lepidopteran mortality on resistant wild relatives.

Building Better Environmental Risk Assessments

PubMed Central

Layton, Raymond; Smith, Joe; Macdonald, Phil; Letchumanan, Ramatha; Keese, Paul; Lema, Martin

2015-01-01

Risk assessment is a reasoned, structured approach to address uncertainty based on scientific and technical evidence. It forms the foundation for regulatory decision-making, which is bound by legislative and policy requirements, as well as the need for making timely decisions using available resources. In order to be most useful, environmental risk assessments (ERAs) for genetically modified (GM) crops should provide consistent, reliable, and transparent results across all types of GM crops, traits, and environments. The assessments must also separate essential information from scientific or agronomic data of marginal relevance or value for evaluating risk and complete the assessment in a timely fashion. Challenges in conducting ERAs differ across regulatory systems – examples are presented from Canada, Malaysia, and Argentina. One challenge faced across the globe is the conduct of risk assessments with limited resources. This challenge can be overcome by clarifying risk concepts, placing greater emphasis on data critical to assess environmental risk (for example, phenotypic and plant performance data rather than molecular data), and adapting advances in risk analysis from other relevant disciplines. PMID:26301217

Building Better Environmental Risk Assessments.

PubMed

Layton, Raymond; Smith, Joe; Macdonald, Phil; Letchumanan, Ramatha; Keese, Paul; Lema, Martin

2015-01-01

Risk assessment is a reasoned, structured approach to address uncertainty based on scientific and technical evidence. It forms the foundation for regulatory decision-making, which is bound by legislative and policy requirements, as well as the need for making timely decisions using available resources. In order to be most useful, environmental risk assessments (ERAs) for genetically modified (GM) crops should provide consistent, reliable, and transparent results across all types of GM crops, traits, and environments. The assessments must also separate essential information from scientific or agronomic data of marginal relevance or value for evaluating risk and complete the assessment in a timely fashion. Challenges in conducting ERAs differ across regulatory systems - examples are presented from Canada, Malaysia, and Argentina. One challenge faced across the globe is the conduct of risk assessments with limited resources. This challenge can be overcome by clarifying risk concepts, placing greater emphasis on data critical to assess environmental risk (for example, phenotypic and plant performance data rather than molecular data), and adapting advances in risk analysis from other relevant disciplines.

Interactions between Bt crops and aquatic ecosystems: A review.

PubMed

Venter, Hermoine J; Bøhn, Thomas

2016-12-01

The term Bt crops collectively refers to crops that have been genetically modified to include a gene (or genes) sourced from Bacillus thuringiensis (Bt) bacteria. These genes confer the ability to produce proteins toxic to certain insect pests. The interaction between Bt crops and adjacent aquatic ecosystems has received limited attention in research and risk assessment, despite the fact that some Bt crops have been in commercial use for 20 yr. Reports of effects on aquatic organisms such as Daphnia magna, Elliptio complanata, and Chironomus dilutus suggest that some aquatic species may be negatively affected, whereas other reports suggest that the decreased use of insecticides precipitated by Bt crops may benefit aquatic communities. The present study reviews the literature regarding entry routes and exposure pathways by which aquatic organisms may be exposed to Bt crop material, as well as feeding trials and field surveys that have investigated the effects of Bt-expressing plant material on such organisms. The present review also discusses how Bt crop development has moved past single-gene events, toward multigene stacked varieties that often contain herbicide resistance genes in addition to multiple Bt genes, and how their use (in conjunction with co-technology such as glyphosate/Roundup) may impact and interact with aquatic ecosystems. Lastly, suggestions for further research in this field are provided. Environ Toxicol Chem 2016;35:2891-2902. © 2016 SETAC. © 2016 SETAC.

Developmental Pathways Are Blueprints for Designing Successful Crops

PubMed Central

Trevaskis, Ben

2018-01-01

Genes controlling plant development have been studied in multiple plant systems. This has provided deep insights into conserved genetic pathways controlling core developmental processes including meristem identity, phase transitions, determinacy, stem elongation, and branching. These pathways control plant growth patterns and are fundamentally important to crop biology and agriculture. This review describes the conserved pathways that control plant development, using Arabidopsis as a model. Historical examples of how plant development has been altered through selection to improve crop performance are then presented. These examples, drawn from diverse crops, show how the genetic pathways controlling development have been modified to increase yield or tailor growth patterns to suit local growing environments or specialized crop management practices. Strategies to apply current progress in genomics and developmental biology to future crop improvement are then discussed within the broader context of emerging trends in plant breeding. The ways that knowledge of developmental processes and understanding of gene function can contribute to crop improvement, beyond what can be achieved by selection alone, are emphasized. These include using genome re-sequencing, mutagenesis, and gene editing to identify or generate novel variation in developmental genes. The expanding scope for comparative genomics, the possibility to engineer new developmental traits and new approaches to resolve gene–gene or gene–environment interactions are also discussed. Finally, opportunities to integrate fundamental research and crop breeding are highlighted. PMID:29922318

Developmental Pathways Are Blueprints for Designing Successful Crops.

PubMed

Trevaskis, Ben

2018-01-01

Genes controlling plant development have been studied in multiple plant systems. This has provided deep insights into conserved genetic pathways controlling core developmental processes including meristem identity, phase transitions, determinacy, stem elongation, and branching. These pathways control plant growth patterns and are fundamentally important to crop biology and agriculture. This review describes the conserved pathways that control plant development, using Arabidopsis as a model. Historical examples of how plant development has been altered through selection to improve crop performance are then presented. These examples, drawn from diverse crops, show how the genetic pathways controlling development have been modified to increase yield or tailor growth patterns to suit local growing environments or specialized crop management practices. Strategies to apply current progress in genomics and developmental biology to future crop improvement are then discussed within the broader context of emerging trends in plant breeding. The ways that knowledge of developmental processes and understanding of gene function can contribute to crop improvement, beyond what can be achieved by selection alone, are emphasized. These include using genome re-sequencing, mutagenesis, and gene editing to identify or generate novel variation in developmental genes. The expanding scope for comparative genomics, the possibility to engineer new developmental traits and new approaches to resolve gene-gene or gene-environment interactions are also discussed. Finally, opportunities to integrate fundamental research and crop breeding are highlighted.

Toxicological evaluation of proteins introduced into food crops

PubMed Central

Kough, John; Herouet-Guicheney, Corinne; Jez, Joseph M.

2013-01-01

This manuscript focuses on the toxicological evaluation of proteins introduced into GM crops to impart desired traits. In many cases, introduced proteins can be shown to have a history of safe use. Where modifications have been made to proteins, experience has shown that it is highly unlikely that modification of amino acid sequences can make a non-toxic protein toxic. Moreover, if the modified protein still retains its biological function, and this function is found in related proteins that have a history of safe use (HOSU) in food, and the exposure level is similar to functionally related proteins, then the modified protein could also be considered to be “as-safe-as” those that have a HOSU. Within nature, there can be considerable evolutionary changes in the amino acid sequence of proteins within the same family, yet these proteins share the same biological function. In general, food crops such as maize, soy, rice, canola etc. are subjected to a variety of processing conditions to generate different food products. Processing conditions such as cooking, modification of pH conditions, and mechanical shearing can often denature proteins in these crops resulting in a loss of functional activity. These same processing conditions can also markedly lower human dietary exposure to (functionally active) proteins. Safety testing of an introduced protein could be indicated if its biological function was not adequately characterized and/or it was shown to be structurally/functionally related to proteins that are known to be toxic to mammals. PMID:24164515

Genetically modified crops: success, safety assessment, and public concern.

PubMed

Singh, Om V; Ghai, Shivani; Paul, Debarati; Jain, Rakesh K

2006-08-01

With the emergence of transgenic technologies, new ways to improve the agronomic performance of crops for food, feed, and processing applications have been devised. In addition, ability to express foreign genes using transgenic technologies has opened up options for producing large quantities of commercially important industrial or pharmaceutical products in plants. Despite this high adoption rate and future promises, there is a multitude of concerns about the impact of genetically modified (GM) crops on the environment. Potential contamination of the environment and food chains has prompted detailed consideration of how such crops and the molecules that they produce can be effectively isolated and contained. One of the reasonable steps after creating a transgenic plant is to evaluate its potential benefits and risks to the environment and these should be compared to those generated by traditional agricultural practices. The precautionary approach in risk management of GM plants may make it necessary to monitor significant wild and weed populations that might be affected by transgene escape. Effective risk assessment and monitoring mechanisms are the basic prerequisites of any legal framework to adequately address the risks and watch out for new risks. Several agencies in different countries monitor the release of GM organisms or frame guidelines for the appropriate application of recombinant organisms in agro-industries so as to assure the safe use of recombinant organisms and to achieve sound overall development. We feel that it is important to establish an internationally harmonized framework for the safe handling of recombinant DNA organisms within a few years.

Procedure to select test organisms for environmental risk assessment of genetically modified crops in aquatic systems.

PubMed

Hilbeck, Angelika; Bundschuh, Rebecca; Bundschuh, Mirco; Hofmann, Frieder; Oehen, Bernadette; Otto, Mathias; Schulz, Ralf; Trtikova, Miluse

2017-11-01

For a long time, the environmental risk assessment (ERA) of genetically modified (GM) crops focused mainly on terrestrial ecosystems. This changed when it was scientifically established that aquatic ecosystems are exposed to GM crop residues that may negatively affect aquatic species. To assist the risk assessment process, we present a tool to identify ecologically relevant species usable in tiered testing prior to authorization or for biological monitoring in the field. The tool is derived from a selection procedure for terrestrial ecosystems with substantial but necessary changes to adequately consider the differences in the type of ecosystems. By using available information from the Water Framework Directive (2000/60/EC), the procedure can draw upon existing biological data on aquatic systems. The proposed procedure for aquatic ecosystems was tested for the first time during an expert workshop in 2013, using the cultivation of Bacillus thuringiensis (Bt) maize as the GM crop and 1 stream type as the receiving environment in the model system. During this workshop, species executing important ecological functions in aquatic environments were identified in a stepwise procedure according to predefined ecological criteria. By doing so, we demonstrated that the procedure is practicable with regard to its goal: From the initial long list of 141 potentially exposed aquatic species, 7 species and 1 genus were identified as the most suitable candidates for nontarget testing programs. Integr Environ Assess Manag 2017;13:974-979. © 2017 SETAC. © 2017 SETAC.

Nucleic Acid-Based Detection and Identification of Bacterial and Fungal Plant Pathogens - Final Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kingsley, Mark T.

2001-03-13

The threat to American interests from terrorists is not limited to attacks against humans. Terrorists might seek to inflict damage to the U.S. economy by attacking our agricultural sector. Infection of commodity crops by bacterial or fungal crop pathogens could adversely impact U.S. agriculture, either directly from damage to crops or indirectly from damage to our ability to export crops suspected of contamination. Recognizing a terrorist attack against U.S. agriculture, to be able to prosecute the terrorists, is among the responsibilities of the members of Hazardous Material Response Unit (HMRU) of the Federal Bureau of Investigation (FBI). Nucleic acid analysismore » of plant pathogen strains by the use of polymerase chain reaction (PCR) amplification techniques is a powerful method for determining the exact identity of pathogens, as well as their possible region of origin. This type of analysis, however, requires that PCR assays be developed specific to each particular pathogen strain, and analysis protocols developed that are specific to the particular instrument used for detection. The objectives of the work described here were threefold: 1) to assess the potential terrorist threat to U.S. agricultural crops, 2) to determine whether suitable assays exist to monitor that threat, and 3) where assays are needed for priority plant pathogen threats, to modify or develop those assays for use by specialists at the HMRU. The assessment of potential threat to U.S. commodity crops and the availability of assays for those threats were described in detail in the Technical Requirements Document (9) and will be summarized in this report. This report addresses development of specific assays identified in the Technical Requirements Document, and offers recommendations for future development to ensure that HMRU specialists will be prepared with the PCR assays they need to protect against the threat of economic terrorism.« less

Nucleic Acid-Based Detection and Identification of Bacterial and Fungal Plant Pathogens - Final Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kingsley, Mark T

2001-03-13

The threat to American interests from terrorists is not limited to attacks against humans. Terrorists might seek to inflict damage to the U.S. economy by attacking our agricultural sector. Infection of commodity crops by bacterial or fungal crop pathogens could adversely impact U.S. agriculture, either directly from damage to crops or indirectly from damage to our ability to export crops suspected of contamination. Recognizing a terrorist attack against U.S. agriculture, to be able to prosecute the terrorists, is among the responsibilities of the members of Hazardous Material Response Unit (HMRU) of the Federal Bureau of Investigation (FBI). Nucleic acid analysismore » of plant pathogen strains by the use of polymerase chain reaction (PCR) amplification techniques is a powerful method for determining the exact identity of pathogens, as well as their possible region of origin. This type of analysis, however, requires that PCR assays be developed specific to each particular pathogen strain, an d analysis protocols developed that are specific to the particular instrument used for detection. The objectives of the work described here were threefold: (1) to assess the potential terrorist threat to U.S. agricultural crops, (2) to determine whether suitable assays exist to monitor that threat, and (3) where assays are needed for priority plant pathogen threats, to modify or develop those assays for use by specialists at the HMRU. The assessment of potential threat to U.S. commodity crops and the availability of assays for those threats were described in detail in the Technical Requirements Document (9) and will be summarized in this report. This report addresses development of specific assays identified in the Technical Requirements Document, and offers recommendations for future development to ensure that HMRU specialists will be prepared with the PCR assays they need to protect against the threat of economic terrorism.« less

[Exposure degree of important non-target arthropods to Cry2Aa in Bt rice fields].

PubMed

Zhang, Qing-Ling; Li, Yun-He; Hua, Hong-Xia; Yang, Chang-Ju; Wu, Hong-Jin; Peng, Yu-Fa

2013-06-01

Based on the principle of "risk = hazard x exposure", the selected representative nontarget organisms in the assessment of the potential effects of insect-resistant genetically modified (GM) crops on non-target arthropods in laboratory are generally the arthropod species highly exposed to the insecticidal proteins expressed by the GM crops in farmland ecosystem. In order to understand the exposure degree of the important arthropod species to Cry proteins in Bt rice fields, and to select the appropriate non-target arthropods in the risk assessment of insect-resistant GM crops, the enzyme-linked immunosorbent assay (ELISA) was conducted to measure the Cry2Aa protein concentration in the arthropods collected from the cry2Aa rice fields at different rice growth stages. The results showed that there was a significant difference in the Cry2Aa content protein concentration in different arthropod species. Some species did not contain Cry2Aa protein, while some species contained larger amounts of Cry2Aa protein. Relative to the arthropods colleted after rice anthesis, the arthropods colleted in rice anthesis contained relative higher concentrations of Cry2Aa protein, especially for the predacious arthropods. No Cry proteins were detected in parasitic arthropods. This study provided references for the laboratory assessment of the effects of GM rice on nontarget arthropods.

Are all GMOs the same? Consumer acceptance of cisgenic rice in India.

PubMed

Shew, Aaron M; Nalley, Lawton L; Danforth, Diana M; Dixon, Bruce L; Nayga, Rodolfo M; Delwaide, Anne-Cecile; Valent, Barbara

2016-01-01

India has more than 215 million food-insecure people, many of whom are farmers. Genetically modified (GM) crops have the potential to alleviate this problem by increasing food supplies and strengthening farmer livelihoods. For this to occur, two factors are critical: (i) a change in the regulatory status of GM crops, and (ii) consumer acceptance of GM foods. There are generally two classifications of GM crops based on how they are bred: cisgenically bred, containing only DNA sequences from sexually compatible organisms; and transgenically bred, including DNA sequences from sexually incompatible organisms. Consumers may view cisgenic foods as more natural than those produced via transgenesis, thus influencing consumer acceptance. This premise was the catalyst for our study--would Indian consumers accept cisgenically bred rice and if so, how would they value cisgenics compared to conventionally bred rice, GM-labelled rice and 'no fungicide' rice? In this willingness-to-pay study, respondents did not view cisgenic and GM rice differently. However, participants were willing-to-pay a premium for any aforementioned rice with a 'no fungicide' attribute, which cisgenics and GM could provide. Although not significantly different (P = 0.16), 76% and 73% of respondents stated a willingness-to-consume GM and cisgenic foods, respectively. © 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

Protection goals in environmental risk assessment: a practical approach.

PubMed

Garcia-Alonso, Monica; Raybould, Alan

2014-12-01

Policy protection goals are set up in most countries to minimise harm to the environment, humans and animals caused by human activities. Decisions on whether to approve new agricultural products, like pesticides or genetically modified (GM) crops, take into account these policy protection goals. To support decision-making, applications for approval of commercial uses of GM crops usually comprise an environmental risk assessment (ERA). These risk assessments are analytical tools, based on science, that follow a conceptual model that includes a problem formulation step where policy protection goals are considered. However, in most countries, risk assessors face major problems in that policy protection goals set in the legislation are stated in very broad terms and are too ambiguous to be directly applicable in ERAs. This means that risk assessors often have to interpret policy protection goals without clear guidance on what effects would be considered harmful. In this paper we propose a practical approach that may help risk assessors to translate policy protection goals into unambiguous (i.e., operational) protection goals and to establish relevant assessment endpoints and risk hypotheses that can be used in ERAs. Examples are provided to show how this approach can be applied to two areas of environmental concern relevant to the ERAs of GM crops.

Comparing the refuge strategy for managing the evolution of insect resistance under different reproductive strategies.

PubMed

Crowder, David W; Carrière, Yves

2009-12-07

Genetically modified (GM) crops are used extensively worldwide to control diploid agricultural insect pests that reproduce sexually. However, future GM crops will likely soon target haplodiploid and parthenogenetic insects. As rapid pest adaptation could compromise these novel crops, strategies to manage resistance in haplodiploid and parthenogenetic pests are urgently needed. Here, we developed models to characterize factors that could delay or prevent the evolution of resistance to GM crops in diploid, haplodiploid, and parthenogenetic insect pests. The standard strategy for managing resistance in diploid pests relies on refuges of non-GM host plants and GM crops that produce high toxin concentrations. Although the tenets of the standard refuge strategy apply to all pests, this strategy does not greatly delay the evolution of resistance in haplodiploid or parthenogenetic pests. Two additional factors are needed to effectively delay or prevent the evolution of resistance in such pests, large recessive or smaller non-recessive fitness costs must reduce the fitness of resistance individuals in refuges (and ideally also on GM crops), and resistant individuals must have lower fitness on GM compared to non-GM crops (incomplete resistance). Recent research indicates that the magnitude and dominance of fitness costs could be increased by using specific host-plants, natural enemies, or pathogens. Furthermore, incomplete resistance could be enhanced by engineering desirable traits into novel GM crops. Thus, the sustainability of GM crops that target haplodiploid or parthenogenetic pests will require careful consideration of the effects of reproductive mode, fitness costs, and incomplete resistance.

Herbicide-Resistant Crops: Utilities and Limitations for Herbicide-Resistant Weed Management

PubMed Central

2010-01-01

Since 1996, genetically modified herbicide-resistant (HR) crops, particularly glyphosate-resistant (GR) crops, have transformed the tactics that corn, soybean, and cotton growers use to manage weeds. The use of GR crops continues to grow, but weeds are adapting to the common practice of using only glyphosate to control weeds. Growers using only a single mode of action to manage weeds need to change to a more diverse array of herbicidal, mechanical, and cultural practices to maintain the effectiveness of glyphosate. Unfortunately, the introduction of GR crops and the high initial efficacy of glyphosate often lead to a decline in the use of other herbicide options and less investment by industry to discover new herbicide active ingredients. With some exceptions, most growers can still manage their weed problems with currently available selective and HR crop-enabled herbicides. However, current crop management systems are in jeopardy given the pace at which weed populations are evolving glyphosate resistance. New HR crop technologies will expand the utility of currently available herbicides and enable new interim solutions for growers to manage HR weeds, but will not replace the long-term need to diversify weed management tactics and discover herbicides with new modes of action. This paper reviews the strengths and weaknesses of anticipated weed management options and the best management practices that growers need to implement in HR crops to maximize the long-term benefits of current technologies and reduce weed shifts to difficult-to-control and HR weeds. PMID:20586458

Conflicts of Interest in GM Bt Crop Efficacy and Durability Studies

PubMed Central

Lombaert, Eric

2016-01-01

Public confidence in genetically modified (GM) crop studies is tenuous at best in many countries, including those of the European Union in particular. A lack of information about the effects of ties between academic research and industry might stretch this confidence to the breaking point. We therefore performed an analysis on a large set of research articles (n = 672) focusing on the efficacy or durability of GM Bt crops and ties between the researchers carrying out these studies and the GM crop industry. We found that ties between researchers and the GM crop industry were common, with 40% of the articles considered displaying conflicts of interest (COI). In particular, we found that, compared to the absence of COI, the presence of a COI was associated with a 50% higher frequency of outcomes favorable to the interests of the GM crop company. Using our large dataset, we were able to propose possible direct and indirect mechanisms behind this statistical association. They might notably include changes of authorship or funding statements after the results of a study have been obtained and a choice in the topics studied driven by industrial priorities. PMID:27977705

Achieving sustainable cultivation of potatoes

USDA-ARS?s Scientific Manuscript database

Every phase of the production cycle impacts the sustainability of potato. Potato physiology determines how genetically encoded developmental attributes interact with local environmental conditions as modified through agricultural practice to produce a perishable crop. In this chapter we highlight ho...

76 FR 3886 - Proposed Administrative Settlement Agreement Under Section 122(h) of the Comprehensive...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-01-21

... Industries, Inc., Bayer CropScience Inc., Colonial Heights Packaging, Inc., Continental Holdings, Inc., Croda... received and may modify or withdraw its consent to the settlement if comments received disclose facts or...

Assessing the impact of climate change upon hydrology and agriculture in the Indrawati Basin, Nepal.

NASA Astrophysics Data System (ADS)

Palazzoli, Irene; Bocchiola, Daniele; Nana, Ester; Maskey, Shreedhar; Uhlenbrook, Stefan

2014-05-01

Agriculture is sensitive to climate change, especially to temperature and precipitation changes. The purpose of this study was to evaluate the climate change impacts upon rain-fed crops production in the Indrawati river basin, Nepal. The Soil and Water Assessment Tool SWAT model was used to model hydrology and cropping systems in the catchment, and to predict the influence of different climate change scenarios therein. Daily weather data collected from about 13 weather stations during 4 decades were used to constrain the SWAT model, and data from two hydrometric stations used to calibrate/validate it. Then management practices (crop calendar) were applied to specific Hydrological Response Units (HRUs) for the main crops of the region, rice, corn and wheat. Manual calibration of crop production was also carried, against values of crop yield in the area from literature. The calibrated and validated model was further applied to assess the impact of three future climate change scenarios (RCPs) upon the crop productivity in the region. Three climate models (GCMs) were adopted, each with three RCPs (2.5, 4.5, 8.5). Hence, impacts of climate change were assessed considering three time windows, namely a baseline period (1995-2004), the middle of century (2045-2054) and the end of century (2085-2094). For each GCM and RCP future hydrology and yield was compared to baseline scenario. The results displayed slightly modified hydrological cycle, and somewhat small variation in crop production, variable with models and RCPs, and for crop type, the largest being for wheat. Keywords: Climate Change, Nepal, hydrological cycle, crop yield.

Modeling Spatial and Temporal Variability in Ammonia Emissions from Agricultural Fertilization

NASA Astrophysics Data System (ADS)

Balasubramanian, S.; Koloutsou-Vakakis, S.; Rood, M. J.

2013-12-01

Ammonia (NH3), is an important component of the reactive nitrogen cycle and a precursor to formation of atmospheric particulate matter (PM). Predicting regional PM concentrations and deposition of nitrogen species to ecosystems requires representative emission inventories. Emission inventories have traditionally been developed using top down approaches and more recently from data assimilation based on satellite and ground based ambient concentrations and wet deposition data. The National Emission Inventory (NEI) indicates agricultural fertilization as the predominant contributor (56%) to NH3 emissions in Midwest USA, in 2002. However, due to limited understanding of the complex interactions between fertilizer usage, farm practices, soil and meteorological conditions and absence of detailed statistical data, such emission estimates are currently based on generic emission factors, time-averaged temporal factors and coarse spatial resolution. Given the significance of this source, our study focuses on developing an improved NH3 emission inventory for agricultural fertilization at finer spatial and temporal scales for air quality modeling studies. Firstly, a high-spatial resolution 4 km x 4 km NH3 emission inventory for agricultural fertilization has been developed for Illinois by modifying spatial allocation of emissions based on combining crop-specific fertilization rates with cropland distribution in the Sparse Matrix Operator Kernel Emissions model. Net emission estimates of our method are within 2% of NEI, since both methods are constrained by fertilizer sales data. However, we identified localized crop-specific NH3 emission hotspots at sub-county resolutions absent in NEI. Secondly, we have adopted the use of the DeNitrification-DeComposition (DNDC) Biogeochemistry model to simulate the physical and chemical processes that control volatilization of nitrogen as NH3 to the atmosphere after fertilizer application and resolve the variability at the hourly scale. Representative temporal factors are being developed to capture crop-specific NH3 emission variability by combining knowledge of local crop management practices with high resolution cropland and soil maps. This improved spatially and temporally dependent NH3 emission inventory for agricultural fertilization is being prepared as a direct input to a state of the art air quality model to evaluate the effects of agricultural fertilization on regional air quality and atmospheric deposition of reactive nitrogen species.

Airborne and ground-based remote sensing for the estimation of evapotranspiration and yield of bean, potato, and sugar beet crops

NASA Astrophysics Data System (ADS)

Jayanthi, Harikishan

The focus of this research was two-fold: (1) extend the reflectance-based crop coefficient approach to non-grain (potato and sugar beet), and vegetable crops (bean), and (2) develop vegetation index (VI)-yield statistical models for potato and sugar beet crops using high-resolution aerial multispectral imagery. Extensive crop biophysical sampling (leaf area index and aboveground dry biomass sampling) and canopy reflectance measurements formed the backbone of developing of canopy reflectance-based crop coefficients for bean, potato, and sugar beet crops in this study. Reflectance-based crop coefficient equations were developed for the study crops cultivated in Kimberly, Idaho, and subsequently used in water availability simulations in the plant root zone during 1998 and 1999 seasons. The simulated soil water profiles were compared with independent measurements of actual soil water profiles in the crop root zone in selected fields. It is concluded that the canopy reflectance-based crop coefficient technique can be successfully extended to non-grain crops as well. While the traditional basal crop coefficients generally expect uniform growth in a region the reflectance-based crop coefficients represent the actual crop growth pattern (in less than ideal water availability conditions) in individual fields. Literature on crop canopy interactions with sunlight states that there is a definite correspondence between leaf area index progression in the season and the final yield. In case of crops like potato and sugar beet, the yield is influenced not only on how early and how quickly the crop establishes its canopy but also on how long the plant stands on the ground in a healthy state. The integrated area under the crop growth curve has shown excellent correlations with hand-dug samples of potato and sugar beet crops in this research. Soil adjusted vegetation index-yield models were developed, and validated using multispectral aerial imagery. Estimated yield images were compared with the actual yields extracted from the ground. The remote sensing-derived yields compared well with the actual yields sampled on the ground. This research has highlighted the importance of the date of spectral emergence, the need to know the duration for which the crops stand on the ground, and the need to identify critical periods of time when multispectral coverages are essential for reliable tuber yield estimation.

Elevating crop disease resistance with cloned genes

PubMed Central

Jones, Jonathan D. G.; Witek, Kamil; Verweij, Walter; Jupe, Florian; Cooke, David; Dorling, Stephen; Tomlinson, Laurence; Smoker, Matthew; Perkins, Sara; Foster, Simon

2014-01-01

Essentially all plant species exhibit heritable genetic variation for resistance to a variety of plant diseases caused by fungi, bacteria, oomycetes or viruses. Disease losses in crop monocultures are already significant, and would be greater but for applications of disease-controlling agrichemicals. For sustainable intensification of crop production, we argue that disease control should as far as possible be achieved using genetics rather than using costly recurrent chemical sprays. The latter imply CO2 emissions from diesel fuel and potential soil compaction from tractor journeys. Great progress has been made in the past 25 years in our understanding of the molecular basis of plant disease resistance mechanisms, and of how pathogens circumvent them. These insights can inform more sophisticated approaches to elevating disease resistance in crops that help us tip the evolutionary balance in favour of the crop and away from the pathogen. We illustrate this theme with an account of a genetically modified (GM) blight-resistant potato trial in Norwich, using the Rpi-vnt1.1 gene isolated from a wild relative of potato, Solanum venturii, and introduced by GM methods into the potato variety Desiree. PMID:24535396

Developing a Composite Aquifer Vulnerability Assessment Model Combining DRASTIC with Agricultural Land Use in Choushui River Alluvial Fan, Central Taiwan

NASA Astrophysics Data System (ADS)

Chen, Shih-Kai; Hsieh, Chih-Heng; Tsai, Cheng-Bin

2017-04-01

Aquifer vulnerability assessment is considered to be an effective tool in controlling potential pollution which is critical for groundwater management. The Choushui River alluvial fan, located in central Taiwan, is an agricultural area with complex crop patterns and various irrigation schemes, which increased the difficulties in groundwater resource management. The aim of this study is to propose an integrated methodology to assess shallow groundwater vulnerability by including land-use impact on groundwater potential pollution. The original groundwater vulnerability methodology, DRASTIC, was modified by adding a land-use parameter in order to assess groundwater vulnerability under intense agricultural activities. To examine the prediction capacity of pollution for the modified DRASTIC model, various risk categories of contamination potentials were compared with observed nitrate-N obtained from groundwater monitoring network. It was found that for the original DRASTIC vulnerability map, some areas with low nitrate-N concentrations are covered within the high vulnerability areas, especially in the northern part of mid-fan areas, where rice paddy is the main crop and planted for two crop seasons per year. The low nitrate-N contamination potential of rice paddies may be resulted from the denitrification in the reduced root zone. By reducing the rating for rice paddies, the modified model was proved to be capable of increasing the precise of prediction in study area. The results can provide a basis for groundwater monitoring network design and effective preserve measures formulation in the mixed agricultural area. Keyword:Aquifer Vulnerability, Groundwater, DRASTIC, Nitrate-N

An experimental study of the atmospheric boundary layer modified by a change in surface roughness and surface temperature

NASA Technical Reports Server (NTRS)

Tieleman, H. W.; Derrington, D. B., Jr.

1977-01-01

Turbulent flow, resembling an on-shore flow from the ocean crossing the beach at an oblique angle, is investigated. Measurements of this flow have been taken at high sample rates and include measurements at various heights, high enough to describe the portion of the mean wind and temperature profiles and fluxes that are of interest for the solution of practical engineering problems. These problems could include air pollution (fumigation and plume trapping), operation of low flying aircraft, crop-spraying and crop-dusting operations.

Event DAS-444Ø6-6 soybean grown in Brazil is compositionally equivalent to non-transgenic soybean.

PubMed

Fast, Brandon J; Galan, Maria P; Schafer, Ariane C

2016-04-02

Soybean event DAS-444Ø6-6 is tolerant to the herbicides 2,4-D, glyphosate, and glufosinate. An investigation of potential unintended adverse compositional changes in a genetically modified crop is required to meet government regulatory requirements in various geographies. A study to meet these requirements in Brazil was completed demonstrating compositional equivalency between DAS-444Ø6-6 and non-transgenic soybean. This study supplements the extensive literature supporting transgenesis as less disruptive of crop composition compared with traditional breeding methods.

Development of melting temperature-based SYBR Green I polymerase chain reaction methods for multiplex genetically modified organism detection.

PubMed

Hernández, Marta; Rodríguez-Lázaro, David; Esteve, Teresa; Prat, Salomé; Pla, Maria

2003-12-15

Commercialization of several genetically modified crops has been approved worldwide to date. Uniplex polymerase chain reaction (PCR)-based methods to identify these different insertion events have been developed, but their use in the analysis of all commercially available genetically modified organisms (GMOs) is becoming progressively insufficient. These methods require a large number of assays to detect all possible GMOs present in the sample and thereby the development of multiplex PCR systems using combined probes and primers targeted to sequences specific to various GMOs is needed for detection of this increasing number of GMOs. Here we report on the development of a multiplex real-time PCR suitable for multiple GMO identification, based on the intercalating dye SYBR Green I and the analysis of the melting curves of the amplified products. Using this method, different amplification products specific for Maximizer 176, Bt11, MON810, and GA21 maize and for GTS 40-3-2 soybean were obtained and identified by their specific Tm. We have combined amplification of these products in a number of multiplex reactions and show the suitability of the methods for identification of GMOs with a sensitivity of 0.1% in duplex reactions. The described methods offer an economic and simple alternative to real-time PCR systems based on sequence-specific probes (i.e., TaqMan chemistry). These methods can be used as selection tests and further optimized for uniplex GMO quantification.

ESTABLISHMENT OF TRANSGENIC CREEPING BENTGRASS (AGROSTIS STOLONIFERA L.) IN NON-AGRONOMIC HABITATS

EPA Science Inventory

Concerns about genetically modified crops include transgene flow to compatible wild species and potential unintended ecological consequences associated with transgene introgression. To date, there has been little empirical documentation of the relative frequency of establishment...

EPA and States' Collective Efforts Lead to Regulatory Action on Dicamba

EPA Pesticide Factsheets

Agreement with Monsanto, BASF and DuPont on measures to further minimize the potential for drift to damage neighboring crops from the use of dicamba formulations used to control weeds in genetically modified cotton and soybeans.

Changing Pattern of Crop Fraction in Late Blight Induced Potato Crops in Potato Bowl of West Bengal by using Multi-temporal Time Series AWiFs Data

NASA Astrophysics Data System (ADS)

Chakrabarty, Abhisek

2016-07-01

Crop fraction is the ratio of crop occupying a unit area in ground pixel, is very important for monitoring crop growth. One of the most important variables in crop growth monitoring is the fraction of available solar radiation intercepted by foliage. Late blight of potato (Solanum tuberosum), caused by the oomycete pathogen Phytophthora infestans, is considered to be the most destructive crop diseases of potato worldwide. Under favourable climatic conditions, and without intervention (i.e. fungicide sprays), the disease can destroy potato crop within few weeks. Therefore it is important to evaluate the crop fraction for monitoring the healthy and late blight affected potato crops. This study was conducted in potato bowl of West Bengal, which consists of districts of Hooghly, Howrah, Burdwan, Bankuara, and Paschim Medinipur. In this study different crop fraction estimation method like linear spectral un-mixing, Normalized difference vegetation index (NDVI) based DPM model (Zhang et al. 2013), Ratio vegetation index based DPM model, improved Pixel Dichotomy Model (Li et al. 2014) ware evaluated using multi-temporal IRS AWiFs data in two successive potato growing season of 2012-13 and 2013-14 over the study area and compared with measured crop fraction. The comparative study based on measured healthy and late blight affected potato crop fraction showed that improved Pixel Dichotomy Model maintain the high coefficient of determination (R2= 0.835) with low root mean square error (RMSE=0.21) whereas the correlation values of NDVI based DPM model and RVI based DPM model is 0.763 and 0.694 respectively. The changing pattern of crop fraction profile of late blight affected potato crop was studied in respect of healthy potato crop fraction which was extracted from the 269 GPS points of potato field. It showed that the healthy potato crop fraction profile maintained the normal phenological trend whereas the late blight affected potato crop fraction profile suddenly fallen after late blight disease affected in potato crops. Therefore, it can be concluded that based on the result of this study the improved Pixel Dichotomy Model is the most convenient method for crop fraction estimation for this region with satisfactory accuracy.

Recent Advances and Future Challenges in Modified Mycotoxin Analysis: Why HRMS Has Become a Key Instrument in Food Contaminant Research

PubMed Central

Righetti, Laura; Paglia, Giuseppe; Galaverna, Gianni; Dall’Asta, Chiara

2016-01-01

Mycotoxins are secondary metabolites produced by pathogenic fungi in crops worldwide. These compounds can undergo modification in plants, leading to the formation of a large number of possible modified forms, whose toxicological relevance and occurrence in food and feed is still largely unexplored. The analysis of modified mycotoxins by liquid chromatography–mass spectrometry remains a challenge because of their chemical diversity, the large number of isomeric forms, and the lack of analytical standards. Here, the potential benefits of high-resolution and ion mobility mass spectrometry as a tool for separation and structure confirmation of modified mycotoxins have been investigated/reviewed. PMID:27918432

From classical mutagenesis to nuclease-based breeding - directing natural DNA repair for a natural end-product.

PubMed

Pacher, Michael; Puchta, Holger

2017-05-01

Production of mutants of crop plants by the use of chemical or physical genotoxins has a long tradition. These factors induce the natural DNA repair machinery to repair damage in an error-prone way. In the case of radiation, multiple double-strand breaks (DSBs) are induced randomly in the genome, leading in very rare cases to a desirable phenotype. In recent years the use of synthetic, site-directed nucleases (SDNs) - also referred to as sequence-specific nucleases - like the CRISPR/Cas system has enabled scientists to use exactly the same naturally occurring DNA repair mechanisms for the controlled induction of genomic changes at pre-defined sites in plant genomes. As these changes are not necessarily associated with the permanent integration of foreign DNA, the obtained organisms per se cannot be regarded as genetically modified as there is no way to distinguish them from natural variants. This applies to changes induced by DSBs as well as single-strand breaks, and involves repair by non-homologous end-joining and homologous recombination. The recent development of SDN-based 'DNA-free' approaches makes mutagenesis strategies in classical breeding indistinguishable from SDN-derived targeted genome modifications, even in regard to current regulatory rules. With the advent of new SDN technologies, much faster and more precise genome editing becomes available at reasonable cost, and potentially without requiring time-consuming deregulation of newly created phenotypes. This review will focus on classical mutagenesis breeding and the application of newly developed SDNs in order to emphasize similarities in the context of the regulatory situation for genetically modified crop plants. © 2016 The Authors The Plant Journal © 2016 John Wiley & Sons Ltd.

Mapping of Biophysical Parameters of Rice Agriculture System from Hyperspectral Imagery

NASA Astrophysics Data System (ADS)

Moharana, Shreedevi; Duta, Subashisa

2017-04-01

Chlorophyll, nitrogen and leaf water content are the most essential parameters for paddy crop growth. Ground hyperspectral observations were collected at canopy level during critical growth period of rice by using hand held Spectroradiometer. Chemical analysis was carried out to quantify the total chlorophyll, nitrogen and leaf water content. By exploiting the in-situ hyperspectral measurements, regression models were established between each of the crop growth parameters and the spectral indices specifically designed for chlorophyll, nitrogen and water stress. Narrow band vegetation index models were developed for mapping these parameters from Hyperion imagery in an agriculture system. It was inferred that the modified simple ratio (SR) and leaf nitrogen concentration (LNC) predictive index models, which followed a linear and nonlinear relationship respectively, produced satisfactory results in predicting rice nitrogen content from hyperspectral imagery. The presently developed model was compared with other models proposed by researchers. It was ascertained that, nitrogen content varied widely from 1-4 percentage and only 2-3 percentage for paddy crop using present modified index models and well-known predicted Tian et al. (2011) model respectively. The modified present LNC index model performed better than the established Tian et al. (2011) model as far as the estimated nitrogen content from Hyperion imagery was concerned. Moreover, within the observed chlorophyll range attained from the rice genotypes cultivated in the studied rice agriculture system, the index models (LNC, OASVI, Gitelson, mSR and MTCI) accomplished satisfactory results in the spatial distribution of rice chlorophyll content from Hyperion imagery. Spatial distribution of total chlorophyll content widely varied from 1.77-5.81 mg/g (LNC), 3.0-13 mg/g (OASVI) and 2.90-5.40 mg/g (MTCI). Following the similar guideline, it was found that normalized difference water index (NDWI) and normalized difference infrared index (NDII) predictive models demonstrated the spatial variability of leaf water content from 40 percentage to 90 percentage in the same rice agriculture system which has a good agreement with observed in-situ leaf water measurements. The spatial information of these parameters will be useful for crop nutrient management and yield forecasting, and will serve as inputs to various crop-forecasting models for developing a precision rice agriculture system. Key words: Rice agriculture system, nitrogen, chlorophyll, leaf water content, vegetation index

Site-directed nucleases: a paradigm shift in predictable, knowledge-based plant breeding.

PubMed

Podevin, Nancy; Davies, Howard V; Hartung, Frank; Nogué, Fabien; Casacuberta, Josep M

2013-06-01

Conventional plant breeding exploits existing genetic variability and introduces new variability by mutagenesis. This has proven highly successful in securing food supplies for an ever-growing human population. The use of genetically modified plants is a complementary approach but all plant breeding techniques have limitations. Here, we discuss how the recent evolution of targeted mutagenesis and DNA insertion techniques based on tailor-made site-directed nucleases (SDNs) provides opportunities to overcome such limitations. Plant breeding companies are exploiting SDNs to develop a new generation of crops with new and improved traits. Nevertheless, some technical limitations as well as significant uncertainties on the regulatory status of SDNs may challenge their use for commercial plant breeding. Copyright © 2013 Elsevier Ltd. All rights reserved.

Genomic misconception: a fresh look at the biosafety of transgenic and conventional crops. A plea for a process agnostic regulation.

PubMed

Ammann, Klaus

2014-01-25

The regulation of genetically engineered crops, in Europe and within the legislation of the Cartagena biosafety protocol is built on false premises: The claim was (and unfortunately still is) that there is a basic difference between conventional and transgenic crops, this despite the fact that this has been rejected on scientifically solid grounds since many years. This contribution collects some major arguments for a fresh look at regulation of transgenic crops, they are in their molecular processes of creation not basically different from conventional crops, which are based in their breeding methods on natural, sometimes enhanced mutation. But the fascination and euphoria of the discoveries in molecular biology and the new perspectives in plant breeding in the sixties and seventies led to the wrong focus on transgenic plants alone. In a collective framing process the initial biosafety debates focused on the novelty of the process of transgenesis. When early debates on the risk assessment merged into legislative decisions, this wrong focus on transgenesis alone seemed uncontested. The process-focused view was also fostered by a conglomerate of concerned scientists and biotechnology companies, both with a vested interest to at least tolerate the rise of the safety threshold to secure research money and to discourage competitors of all kinds. Policy minded people and opponent activists without deeper insight in the molecular science agreed to those efforts without much resistance. It is interesting to realize, that the focus on processes was uncontested by a majority of regulators, this despite of serious early warnings from important authorities in science, mainly of US origin. It is time to change the regulation of genetically modified (GM) crops toward a more science based process-agnostic legislation. Although this article concentrates on the critique of the process-oriented regulation, including some details about the history behind, there should be no misunderstanding that there are other important factors responsible for the failure of this kind of process-oriented regulation, most importantly: the predominance of politics in the decision making processes combined with the lack of serious scientific debates on regulatory matters within the European Union and also in the Cartagena system, the obscure and much too complex decision making structures within the EU, and the active, professional, negative and intimidating role of fundamental opposition against GM crops on all levels dealing with flawed science, often declared as better parallel science published by 'independent' scientists. Copyright © 2013 Elsevier B.V. All rights reserved.

Remote-sensing-based rapid assessment of flood crop loss to support USDA flooding decision-making

NASA Astrophysics Data System (ADS)

Di, L.; Yu, G.; Yang, Z.; Hipple, J.; Shrestha, R.

2016-12-01

Floods often cause significant crop loss in the United States. Timely and objective assessment of flood-related crop loss is very important for crop monitoring and risk management in agricultural and disaster-related decision-making in USDA. Among all flood-related information, crop yield loss is particularly important. Decision on proper mitigation, relief, and monetary compensation relies on it. Currently USDA mostly relies on field surveys to obtain crop loss information and compensate farmers' loss claim. Such methods are expensive, labor intensive, and time consumptive, especially for a large flood that affects a large geographic area. Recent studies have demonstrated that Earth observation (EO) data are useful in post-flood crop loss assessment for a large geographic area objectively, timely, accurately, and cost effectively. There are three stages of flood damage assessment, including rapid assessment, early recovery assessment, and in-depth assessment. EO-based flood assessment methods currently rely on the time-series of vegetation index to assess the yield loss. Such methods are suitable for in-depth assessment but are less suitable for rapid assessment since the after-flood vegetation index time series is not available. This presentation presents a new EO-based method for the rapid assessment of crop yield loss immediately after a flood event to support the USDA flood decision making. The method is based on the historic records of flood severity, flood duration, flood date, crop type, EO-based both before- and immediate-after-flood crop conditions, and corresponding crop yield loss. It hypotheses that a flood of same severity occurring at the same pheonological stage of a crop will cause the similar damage to the crop yield regardless the flood years. With this hypothesis, a regression-based rapid assessment algorithm can be developed by learning from historic records of flood events and corresponding crop yield loss. In this study, historic records of MODIS-based flood and vegetation products and USDA/NASS crop type and crop yield data are used to train the regression-based rapid assessment algorithm. Validation of the rapid assessment algorithm indicates it can predict the yield loss at 90% accuracy, which is accurate enough to support USDA on flood-related quick response and mitigation.

Limited irrigation of corn-based no-till crop rotations in West Central Great Plains

USDA-ARS?s Scientific Manuscript database

Due to numerous alternatives in crop sequence and changes in crop yield and price, finding the most profitable crop rotation for an area is a continuous research challenge. The objective of this study was to evaluate 1-, 2-, 3-, and 4-yr limited irrigation corn (Zea mays L.)-based crop rotations for...

A Novel Framework for Adaptation in Agriculture: Lessons Learned from California's Wine Industry (Invited)

NASA Astrophysics Data System (ADS)

Nicholas, K. A.

2010-12-01

While crop yields are threatened by climate change, the management decisions of growers, including their practices to modify the microclimate experienced by the crop, can partially or even completely offset these damages. However, there have been few evaluations of adaptation on the farm scale, where managers are on the front lines of responding to global change. I will present a framework for classifying potential adaptations based on their temporal and spatial scale, their ease of implementation, and their effectiveness in altering or maintaining crop production. Applying this framework to the winegrowing industry in California, it appears that many strategies suggested in the literature for adaptation will either be of limited effectiveness, likely to be cost-prohibitive, or are not compatible with the current values of growers. However, interviews with and observations of winegrowers reveal that novel adaptations, not widely discussed in the literature, are already being employed, often by individuals in an experimental capacity and without community coordination. For example, in addition to irrigation, water is used to modify the vine microclimate for both heating (frost protection) and evaporative cooling. An analysis of responses to past environmental stresses in the wine industry revealed that growers tended to respond to stresses individually rather than collectively, except for severe, novel pests and diseases. Responses may be reactive or proactive; most proactive strategies have been short-term, in response to imminent stress. Growers tend to rely on their own experience to guide their management decisions, which may offer poor guidance under novel climate regimes. These findings highlight some of the difficulties expected in adapting to global change, as well as areas for strategic investments to enhance agricultural resilience to climate change. In particular, strategies to enhance the potential for effective proactive, collective responses could improve adaptive capacity in the context of climate change.

Common vole (Microtus arvalis) ecology and management: implications for risk assessment of plant protection products.

PubMed

Jacob, Jens; Manson, Phil; Barfknecht, Ralf; Fredricks, Timothy

2014-06-01

Common voles (Microtus arvalis) are common small mammals in some European landscapes. They can be a major rodent pest in European agriculture and they are also a representative generic focal small herbivorous mammal species used in risk assessment for plant protection products. In this paper, common vole population dynamics, habitat and food preferences, pest potential and use of the common vole as a model small wild mammal species in the risk assessment process are reviewed. Common voles are a component of agroecosystems in many parts of Europe, inhabiting agricultural areas (secondary habitats) when the carrying capacity of primary grassland habitats is exceeded. Colonisation of secondary habitats occurs during multiannual outbreaks, when population sizes can exceed 1000 individuals ha(-1) . In such cases, in-crop common vole population control management has been practised to avoid significant crop damage. The species' status as a crop pest, high fecundity, resilience to disturbance and intermittent colonisation of crop habitats are important characteristics that should be reflected in risk assessment. Based on the information provided in the scientific literature, it seems justified to modify elements of the current risk assessment scheme for plant protection products, including the use of realistic food intake rates, reduced assessment factors or the use of alternativee focal rodent species in particular European regions. Some of these adjustments are already being applied in some EU member states. Therefore, it seems reasonable consistently to apply such pragmatic and realistic approaches in risk assessments for plant protection products across the EU. © 2013 Society of Chemical Industry.

Populational survey of arthropods on transgenic common bean expressing the rep gene from Bean golden mosaic virus

PubMed Central

Pinheiro, Patrícia V; Quintela, Eliane D; Junqueira, Ana Maria R; Aragão, Francisco JL; Faria, Josias C

2014-01-01

Genetically modified (GM) crops is considered the fastest adopted crop technology in the history of modern agriculture. However, possible undesirable and unintended effects must be considered during the research steps toward development of a commercial product. In this report we evaluated effects of a common bean virus resistant line on arthropod populations, considered as non-target organisms. This GM bean line (named M1/4) was modified for resistance against Bean golden mosaic virus (BGMV) by expressing a mutated REP protein, which is essential for virus replication. Biosafety studies were performed for a period of three years under field conditions. The abundance of some species was significantly higher in specific treatments in a particular year, but not consistently different in other years. A regular pattern was not observed in the distribution of insects between genetically modified and conventional treatments. Data analyses showed that minor differences observed can be attributed to random variation and were not consistent enough to conclude that the treatments were different. Therefore the present study indicates that the relative abundance of species are similar in transgenic and non-transgenic fields. PMID:24922280

Populational survey of arthropods on transgenic common bean expressing the rep gene from Bean golden mosaic virus.

PubMed

Pinheiro, Patrícia V; Quintela, Eliane D; Junqueira, Ana Maria R; Aragão, Francisco J L; Faria, Josias C

2014-01-01

Genetically modified (GM) crops is considered the fastest adopted crop technology in the history of modern agriculture. However, possible undesirable and unintended effects must be considered during the research steps toward development of a commercial product. In this report we evaluated effects of a common bean virus resistant line on arthropod populations, considered as non-target organisms. This GM bean line (named M1/4) was modified for resistance against Bean golden mosaic virus (BGMV) by expressing a mutated REP protein, which is essential for virus replication. Biosafety studies were performed for a period of three years under field conditions. The abundance of some species was significantly higher in specific treatments in a particular year, but not consistently different in other years. A regular pattern was not observed in the distribution of insects between genetically modified and conventional treatments. Data analyses showed that minor differences observed can be attributed to random variation and were not consistent enough to conclude that the treatments were different. Therefore the present study indicates that the relative abundance of species are similar in transgenic and non-transgenic fields.

Comparison of Penman-Monteith, Shuttleworth-Wallace, and modified Priestley-Taylor evapotranspiration models for wildland vegetation in semiarid rangeland

USGS Publications Warehouse

Stannard, David I.

1993-01-01

Eddy correlation measurements of sensible and latent heat flux are used with measurements of net radiation, soil heat flux, and other micrometeorological variables to develop the Penman-Monteith, Shuttleworth-Wallace, and modified Priestley-Taylor evapotranspiration models for use in a sparsely vegetated, semiarid rangeland. The Penman-Monteith model, a one-component model designed for use with dense crops, is not sufficiently accurate (r2 = 0.56 for hourly data and r2 = 0.60 for daily data). The Shuttleworth-Wallace model, a two-component logical extension of the Penman-Monteith model for use with sparse crops, performs significantly better (r2 = 0.78 for hourly data and r2 = 0.85 for daily data). The modified Priestley-Taylor model, a one-component simplified form of the Penman potential evapotranspiration model, surprisingly performs as well as the Shuttle worth-Wallace model. The rigorous Shuttleworth-Wallace model predicts that about one quarter of the vapor flux to the atmosphere is from bare-soil evaporation. Further, during daylight hours, the small leaves are sinks for sensible heat produced at the hot soil surface.

Are GM Crops for Yield and Resilience Possible?

PubMed

Paul, Matthew J; Nuccio, Michael L; Basu, Shib Sankar

2018-01-01

Crop yield improvements need to accelerate to avoid future food insecurity. Outside Europe, genetically modified (GM) crops for herbicide- and insect-resistance have been transformative in agriculture; other traits have also come to market. However, GM of yield potential and stress resilience has yet to impact on food security. Genes have been identified for yield such as grain number, size, leaf growth, resource allocation, and signaling for drought tolerance, but there is only one commercialized drought-tolerant GM variety. For GM and genome editing to impact on yield and resilience there is a need to understand yield-determining processes in a cell and developmental context combined with evaluation in the grower environment. We highlight a sugar signaling mechanism as a paradigm for this approach. Copyright © 2017 Elsevier Ltd. All rights reserved.

Do whole-food animal feeding studies have any value in the safety assessment of GM crops?

PubMed

Herman, Rod A; Ekmay, Ricardo

2014-02-01

The use of whole-food (grain meal contained in feed) animal-feeding studies to support the safety assessment of genetically modified crops has been contentious. This may be, in part, a consequence of poorly agreed upon study objectives. Whole-food animal-feeding studies have been postulated to be useful in detecting both expected and unexpected effects on the composition of genetically modified crops. While the justification of animal feeding studies to detect unexpected effects may be inadequately supported, there may be better justification to conduct such studies in specific cases to investigate the consequences of expected compositional effects including expression of transgenic proteins. Such studies may be justified when (1) safety cannot reasonably be predicted from other evidence, (2) reasonable hypothesis for adverse effects are postulated, (3) the compositional component in question cannot be isolated or enriched in an active form for inclusion in animal feeding studies, and (4) reasonable multiples of exposure can be accomplished relative to human diets. The study design for whole-food animal-feeding studies should be hypotheses-driven, and the types of data collected should be consistent with adverse effects that are known to occur from dietary components of biological origin. Copyright © 2013 The Authors. Published by Elsevier Inc. All rights reserved.

Canadian regulatory perspectives on genome engineered crops

PubMed Central

Smyth, Stuart J.

2017-01-01

ABSTRACT New breeding techniques in plant agriculture exploded upon the scene about two years ago, in 2014. While these innovative plant breeding techniques, soon to be led by CRISPR/Cas9, initially appear to hold tremendous promise for plant breeding, if not a revolution for the industry, the question of how the products of these technologies will be regulated is rapidly becoming a key aspect of the technology's future potential. Regulation of innovative technologies and products has always lagged that of the science, but in the past decade, regulatory systems in many jurisdictions have become gridlocked as they try to regulate genetically modified (GM) crops. This regulatory incapability to efficiently assess and approve innovative new agricultural products is particularly important for new plant breeding techniques as if these techniques are classified as genetically modified breeding techniques, then their acceptance and future will diminish considerably as they will be rejected by the European Union. Conversely, if the techniques are accepted as conventional plant breeding, then the future is blindingly bright. This article examines the international debate about the regulation of new plant breeding techniques and then assesses how the Canadian regulatory system has approached the regulation of these technologies through two more public product approvals, GM apples and GM potatoes, then discusses other crop variety approval and those in the regulatory pipeline. PMID:27858499

Benefits of genetically modified crops for the poor: household income, nutrition, and health.

PubMed

Qaim, Matin

2010-11-30

The potential impacts of genetically modified (GM) crops on income, poverty and nutrition in developing countries continue to be the subject of public controversy. Here, a review of the evidence is given. As an example of a first-generation GM technology, the effects of insect-resistant Bt cotton are analysed. Bt cotton has already been adopted by millions of small-scale farmers, in India, China, and South Africa among others. On average, farmers benefit from insecticide savings, higher effective yields and sizeable income gains. Insights from India suggest that Bt cotton is employment generating and poverty reducing. As an example of a second-generation technology, the likely impacts of beta-carotene-rich Golden Rice are analysed from an ex ante perspective. Vitamin A deficiency is a serious nutritional problem, causing multiple adverse health outcomes. Simulations for India show that Golden Rice could reduce related health problems significantly, preventing up to 40,000 child deaths every year. These examples clearly demonstrate that GM crops can contribute to poverty reduction and food security in developing countries. To realise such social benefits on a larger scale requires more public support for research targeted to the poor, as well as more efficient regulatory and technology delivery systems. Copyright © 2010 Elsevier B.V. All rights reserved.

Impact of cover crops and tillage on porosity of podzolic soil

NASA Astrophysics Data System (ADS)

Błażewicz-Woźniak, M.; Konopiñski, M.

2013-09-01

The aim of the study was to determine the influence of cover crops biomass, mixed with the soil on different dates and with the use of different tools in field conditions. The cover crop biomass had a beneficial influence on the total porosity of the 0-20 cm layer of the soil after winter. The highest porosity was achievedwith cover crops of buckwheat, phacelia and mustard, the lowest with rye. During the vegetation period the highest porosity of soil was observed in the ridges. Among the remaining non-ploughing cultivations, pre-winter use of stubble cultivator proved to have a beneficial influence on the soil porosity, providing results comparable to those achieved in conventional tillage. The differential porosity of the soil was modified not only by the catch crops and the cultivation methods applied, but also by the sample collection dates, and it did change during the vegetation period. The highest content of macropores after winter was observed for the phacelia cover crop, and the lowest in the case of cultivation without any cover crops. Pre-winter tillage with the use of a stubble cultivator increased the amount of macropores in soil in spring, and caused the biggest participation of mesopores as compared with other non-ploughing cultivation treatments of the soil. The smallest amount of mesopores was found in the ridges.

Temporal patterns of infiltration into a water repellent soil under field conditions

NASA Astrophysics Data System (ADS)

Ward, Phil; Roper, Margaret; Micin, Shayne; Jongepier, Ramona

2014-05-01

Water repellency causes substantial economic losses for farmers in southern Australia through impacts on crop growth and weed germination. However, recent research has demonstrated that laboratory measurements of water repellency may not be a reliable indicator of the severity of symptoms experienced in the field. In particular, crop residue retention and minimal soil disturbance led to increased water repellency, but was also associated with higher soil water contents measured at strategic times of the year. Little is known about the temporal patterns of soil water storage close to the soil surface in a water repellent sand. In this research we measured soil water content at a depth of 0.05 m at 15-minute intervals from June 2011 to October 2012, under various treatment combinations of residue retention and soil disturbance. Measurements were made in both 'crop row' and 'crop inter-row' positions. For a rainfall event (9.2 mm) in March 2012, prior to crop seeding, plots previously established with no-till absorbed significantly more water (increase in soil water content of 0.074 v/v) than plots conventionally cultivated (0.038 v/v). In June 2012 (12.6 mm), 4 weeks after crop seeding, tillage was again significant, and there was a significant interaction between tillage and 'row' or 'inter-row' position. These results demonstrate the importance of crop management in modifying the response of water repellent soils to rainfall in the field.

Benefit of Modeling the Observation Error in a Data Assimilation Framework Using Vegetation Information Obtained From Passive Based Microwave Data

NASA Technical Reports Server (NTRS)

Bolten, John D.; Mladenova, Iliana E.; Crow, Wade; De Jeu, Richard

2016-01-01

A primary operational goal of the United States Department of Agriculture (USDA) is to improve foreign market access for U.S. agricultural products. A large fraction of this crop condition assessment is based on satellite imagery and ground data analysis. The baseline soil moisture estimates that are currently used for this analysis are based on output from the modified Palmer two-layer soil moisture model, updated to assimilate near-real time observations derived from the Soil Moisture Ocean Salinity (SMOS) satellite. The current data assimilation system is based on a 1-D Ensemble Kalman Filter approach, where the observation error is modeled as a function of vegetation density. This allows for offsetting errors in the soil moisture retrievals. The observation error is currently adjusted using Normalized Difference Vegetation Index (NDVI) climatology. In this paper we explore the possibility of utilizing microwave-based vegetation optical depth instead.

BATS AND BT INSECT RESISTANCE ON AGRICULTURAL LANDSCAPES

EPA Science Inventory

A landscape model that utilizes land cover classification data, insect life history, insect movement, and bat foraging pressure is developed that addresses the implementation of genetically modified crops in the Winter Garden region of Texas. The principal strategy for delaying r...

ESTABLISHMENT OF TRANSGENETIC HERBICIDE-RESISTANT CREEPING BENTGRASS (AGROSTIS STOLONIFERA L.) IN NONAGRONOMIC HABITATS

EPA Science Inventory

Concerns about genetically modified (GM) crops include transgene flow to compatible wild species and unintended ecological consequences of potential transgene introgression. However, there has been little empirical documentation of establishment and distribution of transgenic pla...

Introduction: Food Allergy - A Toxicologists Point Of View

EPA Science Inventory

Incorporation of new proteins into crops to promote resistance to pests and other stressors, improve nutrition, or otherwise modify phenotype is a technology that has many advantages over conventional approaches. There is concern however, that introduction of a novel protein into...

Capitalizing on deliberate, accidental, and GM-driven environmental change caused by crop modification.

PubMed

Knox, Oliver G G; Walker, Robin L; Booth, Elaine J; Hall, Clare; Crossan, Angus N; Gupta, Vadakattu V S R

2012-01-01

The transgenic traits associated with the majority of commercial genetically modified crops are focused on improving herbicide and insecticide management practices. The use of the transgenic technology in these crops and the associated chemistry has been the basis of studies that provide evidence for occasional improvement in environmental benefits due to the use of less residual herbicides, more targeted pesticides, and reduced field traffic. This is nicely exemplified through studies using Environmental Impact Quotient (EIQ) assessments. Whilst EIQ evaluations may sometimes illustrate environmental benefits they have their limitations. EIQ evaluations are not a surrogate for Environmental Risk Assessments and may not reflect real environmental interactions between crops and the environment. Addressing the impact cultivated plants have on the environment generally attracts little public attention and research funding, but the introduction of GM has facilitated an expansion of research to address potential environmental concerns from government, NGOs, industry, consumers, and growers. In this commentary, some evidence from our own research and several key papers that highlight EIQ assessments of the impact crops are having on the environment are presented. This information may be useful as an education tool on the potential benefits of GM and conventional farming. In addition, other deliberate, accidental, and GM-driven benefits derived from the examination of GM cropping systems is briefly discussed.

Trace elements bioavailability to winter wheat (Triticum aestivum L.) grown subsequent to high biomass plants in a greenhouse study.

PubMed

Neu, Silke; Müller, Ingo; Herzig, Rolf; Dudel, E Gert

2018-05-12

Multielement-contaminated agricultural land requires the adaptation of agronomic practices to meet legal requirements for safe biomass production. The incorporation of bioenergy plants with, at least, moderate phytoextraction capacity into crop rotations with cereals can affect trace elements (TE) phytoavailability and, simultaneously, constitute economic revenues for farmers outside the food or forage sector. Hence, in a crop rotation pot study sunflower (Helianthus annuus L.), modified for high biomass and TE accumulation by chemical mutagenesis, was compared to winter oilseed rape (Brassica napus L.) as pre-crop. On two agricultural soils with different TE loads, the crops´ potential for phytoextraction and for impacts on TE uptake by subsequent winter wheat (Triticum aestivum L.) was studied. The results showed that rape tolerated high-level mixed contamination with metals (Cd, Pb and Zn) and As more than sunflower. In both soils, labile metals concentration increased and soil acidity remained high following sunflower. Furthermore, enhanced grain As accumulation in subsequent wheat was observed. By contrast, soil acidity and Cd or Zn accumulation of subsequent wheat decreased following rape. In the short term, moderate phytoextraction was superimposed by nutrient use or rhizosphere effects of pre-crops, which should be carefully monitored when designing crop rotations for contaminated land.

Economic impacts of policies affecting crop biotechnology and trade.

PubMed

Anderson, Kym

2010-11-30

Agricultural biotechnologies, and especially transgenic crops, have the potential to boost food security in developing countries by offering higher incomes for farmers and lower priced and better quality food for consumers. That potential is being heavily compromised, however, because the European Union and some other countries have implemented strict regulatory systems to govern their production and consumption of genetically modified (GM) food and feed crops, and to prevent imports of foods and feedstuffs that do not meet these strict standards. This paper analyses empirically the potential economic effects of adopting transgenic crops in Asia and Sub-Saharan Africa. It does so using a multi-country, multi-product model of the global economy. The results suggest the economic welfare gains from crop biotechnology adoption are potentially very large, and that those benefits are diminished only very slightly by the presence of the European Union's restriction on imports of GM foods. That is, if developing countries retain bans on GM crop production in an attempt to maintain access to EU markets for non-GM products, the loss to their food consumers as well as to farmers in those developing countries is huge relative to the slight loss that could be incurred from not retaining EU market access. Copyright © 2010 Elsevier B.V. All rights reserved.

A Functional Characterisation of a Wide Range of Cover Crop Species: Growth and Nitrogen Acquisition Rates, Leaf Traits and Ecological Strategies

PubMed Central

Tribouillois, Hélène; Fort, Florian; Cruz, Pablo; Charles, Raphaël; Flores, Olivier; Garnier, Eric; Justes, Eric

2015-01-01

Cover crops can produce ecosystem services during the fallow period, as reducing nitrate leaching and producing green manure. Crop growth rate (CGR) and crop nitrogen acquisition rate (CNR) can be used as two indicators of the ability of cover crops to produce these services in agrosystems. We used leaf functional traits to characterise the growth strategies of 36 cover crops as an approach to assess their ability to grow and acquire N rapidly. We measured specific leaf area (SLA), leaf dry matter content (LDMC), leaf nitrogen content (LNC) and leaf area (LA) and we evaluated their relevance to characterise CGR and CNR. Cover crop species were positioned along the Leaf Economics Spectrum (LES), the SLA-LDMC plane, and the CSR triangle of plant strategies. LA was positively correlated with CGR and CNR, while LDMC was negatively correlated with CNR. All cover crops could be classified as resource-acquisitive species from their relative position on the LES and the SLA-LDMC plane. Most cover crops were located along the Competition/Ruderality axis in the CSR triangle. In particular, Brassicaceae species were classified as very competitive, which was consistent with their high CGR and CNR. Leaf functional traits, especially LA and LDMC, allowed to differentiate some cover crops strategies related to their ability to grow and acquire N. LDMC was lower and LNC was higher in cover crop than in wild species, pointing to an efficient acquisitive syndrome in the former, corresponding to the high resource availability found in agrosystems. Combining several leaf traits explained approximately half of the CGR and CNR variances, which might be considered insufficient to precisely characterise and rank cover crop species for agronomic purposes. We hypothesised that may be the consequence of domestication process, which has reduced the range of plant strategies and modified the leaf trait syndrome in cultivated species. PMID:25789485

CropEx Web-Based Agricultural Monitoring and Decision Support

NASA Technical Reports Server (NTRS)

Harvey. Craig; Lawhead, Joel

2011-01-01

CropEx is a Web-based agricultural Decision Support System (DSS) that monitors changes in crop health over time. It is designed to be used by a wide range of both public and private organizations, including individual producers and regional government offices with a vested interest in tracking vegetation health. The database and data management system automatically retrieve and ingest data for the area of interest. Another stores results of the processing and supports the DSS. The processing engine will allow server-side analysis of imagery with support for image sub-setting and a set of core raster operations for image classification, creation of vegetation indices, and change detection. The system includes the Web-based (CropEx) interface, data ingestion system, server-side processing engine, and a database processing engine. It contains a Web-based interface that has multi-tiered security profiles for multiple users. The interface provides the ability to identify areas of interest to specific users, user profiles, and methods of processing and data types for selected or created areas of interest. A compilation of programs is used to ingest available data into the system, classify that data, profile that data for quality, and make data available for the processing engine immediately upon the data s availability to the system (near real time). The processing engine consists of methods and algorithms used to process the data in a real-time fashion without copying, storing, or moving the raw data. The engine makes results available to the database processing engine for storage and further manipulation. The database processing engine ingests data from the image processing engine, distills those results into numerical indices, and stores each index for an area of interest. This process happens each time new data is ingested and processed for the area of interest, and upon subsequent database entries, the database processing engine qualifies each value for each area of interest and conducts a logical processing of results indicating when and where thresholds are exceeded. Reports are provided at regular, operator-determined intervals that include variances from thresholds and links to view raw data for verification, if necessary. The technology and method of development allow the code base to easily be modified for varied use in the real-time and near-real-time processing environments. In addition, the final product will be demonstrated as a means for rapid draft assessment of imagery.

Agricultural Production. Ohio's Competency Analysis Profile.

ERIC Educational Resources Information Center

Ohio State Univ., Columbus. Vocational Instructional Materials Lab.

This list consists of essential competencies from the following specialized Ohio Competency Analysis Profiles: Beef and Sheep Producers; Crop Producer; Dairy Producer; Poultry Producer; and Swine Producer. Developed through a modified DACUM (Developing a Curriculum) process involving business, industry, labor, and community agency representatives…

Big agronomic data validates an oxymoron: Sustainable intensification under climate change

USDA-ARS?s Scientific Manuscript database

Crop science is increasingly embracing big data to reconcile the apparent rift between intensification of food production and sustainability of a steadily stressed production base. A strategy based on long-term agroecosystem research and modeling simulation of crops, crop rotations and cropping sys...

Genetically modified foods: safety, risks and public concerns-a review.

PubMed

Bawa, A S; Anilakumar, K R

2013-12-01

Genetic modification is a special set of gene technology that alters the genetic machinery of such living organisms as animals, plants or microorganisms. Combining genes from different organisms is known as recombinant DNA technology and the resulting organism is said to be 'Genetically modified (GM)', 'Genetically engineered' or 'Transgenic'. The principal transgenic crops grown commercially in field are herbicide and insecticide resistant soybeans, corn, cotton and canola. Other crops grown commercially and/or field-tested are sweet potato resistant to a virus that could destroy most of the African harvest, rice with increased iron and vitamins that may alleviate chronic malnutrition in Asian countries and a variety of plants that are able to survive weather extremes. There are bananas that produce human vaccines against infectious diseases such as hepatitis B, fish that mature more quickly, fruit and nut trees that yield years earlier and plants that produce new plastics with unique properties. Technologies for genetically modifying foods offer dramatic promise for meeting some areas of greatest challenge for the 21st century. Like all new technologies, they also pose some risks, both known and unknown. Controversies and public concern surrounding GM foods and crops commonly focus on human and environmental safety, labelling and consumer choice, intellectual property rights, ethics, food security, poverty reduction and environmental conservation. With this new technology on gene manipulation what are the risks of "tampering with Mother Nature"?, what effects will this have on the environment?, what are the health concerns that consumers should be aware of? and is recombinant technology really beneficial? This review will also address some major concerns about the safety, environmental and ecological risks and health hazards involved with GM foods and recombinant technology.

Modeling climate change impacts on maize growth with the focus on plant internal water transport

NASA Astrophysics Data System (ADS)

Heinlein, Florian; Biernath, Christian; Klein, Christian; Thieme, Christoph; Priesack, Eckart

2015-04-01

Based on climate change experiments in chambers and on field measurements, the scientific community expects regional and global changes of crop biomass production and yields. In central Europe one major aspect of climate change is the shift of precipitation towards winter months and the increase of extreme events, e.g. heat stress and heavy precipitation, during the main growing season in summer. To understand water uptake, water use, and transpiration rates by plants numerous crop models were developed. We tested the ability of two existing canopy models (CERES-Maize and SPASS) embedded in the model environment Expert-N5.0 to simulate the water balance, water use efficiency and crop growth. Additionally, sap flow was measured using heat-ratio measurement devices at the stem base of individual plants. The models were tested against data on soil water contents, as well as on evaporation and transpiration rates of Maize plants, which were grown on lysimeters at Helmholtz Zentrum München and in the field at the research station Scheyern, Germany, in summer 2013 and 2014. We present the simulation results and discuss observed shortcomings of the models. CERES-Maize and SPASS could simulate the measured dynamics of xylem sap flow. However, these models oversimplify plant water transport, and thus, cannot explain the underlying mechanisms. Therefore, to overcome these shortcomings, we additionally propose a new model, which is based on two coupled 1-D Richards equations, describing explicitly the plant and soil water transport. This model, which has previously successfully been applied to simulate water flux of 94 individual beech trees of an old-grown forest, will lead to a more mechanistic representation of the soil-plant-water-flow-continuum. This xylem water flux model was now implemented into the crop model SPASS and adjusted to simulate water flux of single maize plants. The modified version is presented and explained. Basic model input requirements are the plant above- and below-ground architectures. Shoot architectures were derived from terrestrial laser scanning. Root architectures of Maize plants were generated using a simple L-system. Preliminary results will be presented together with simulation results by CERES-Maize and SPASS.

Ex-Ante Economic Impact Assessment of Genetically Modified Banana Resistant to Xanthomonas Wilt in the Great Lakes Region of Africa

PubMed Central

Ainembabazi, John Herbert; Tripathi, Leena; Rusike, Joseph; Abdoulaye, Tahirou; Manyong, Victor

2015-01-01

Background Credible empirical evidence is scanty on the social implications of genetically modified (GM) crops in Africa, especially on vegetatively propagated crops. Little is known about the future success of introducing GM technologies into staple crops such as bananas, which are widely produced and consumed in the Great Lakes Region of Africa (GLA). GM banana has a potential to control the destructive banana Xanthomonas wilt disease. Objective To gain a better understanding of future adoption and consumption of GM banana in the GLA countries which are yet to permit the production of GM crops; specifically, to evaluate the potential economic impacts of GM cultivars resistant to banana Xanthomonas wilt disease. Data Sources The paper uses data collected from farmers, traders, agricultural extension agents and key informants in the GLA. Analysis We analyze the perceptions of the respondents about the adoption and consumption of GM crop. Economic surplus model is used to determine future economic benefits and costs of producing GM banana. Results On the release of GM banana for commercialization, the expected initial adoption rate ranges from 21 to 70%, while the ceiling adoption rate is up to 100%. Investment in the development of GM banana is economically viable. However, aggregate benefits vary substantially across the target countries ranging from US$ 20 million to 953 million, highest in countries where disease incidence and production losses are high, ranging from 51 to 83% of production. Conclusion The findings support investment in the development of GM banana resistant to Xanthomonas wilt disease. The main beneficiaries of this technology development are farmers and consumers, although the latter benefit more than the former from reduced prices. Designing a participatory breeding program involving farmers and consumers signifies the successful adoption and consumption of GM banana in the target countries. PMID:26414379

Weed seed resources for birds in fields with contrasting conventional and genetically modified herbicide-tolerant crops

PubMed Central

Gibbons, David W; Bohan, David A; Rothery, Peter; Stuart, Rick C; Haughton, Alison J; Scott, Rod J; Wilson, Jeremy D; Perry, Joe N; Clark, Suzanne J; Dawson, Robert J.G; Firbank, Les G

2006-01-01

The UK Farm Scale Evaluations (FSEs) have shown that the use of broad spectrum herbicides on genetically modified herbicide-tolerant (GMHT) crops can have dramatic effects on weed seed production compared to management of conventional varieties. Here, we use FSE data and information on bird diets to determine how GMHT cropping might change the food resources available to farmland birds. More than 60 fields of each of four crops, spring- and winter-sown oilseed rape, beet and maize, were split, one half being sown with a conventional variety, the other with a GMHT variety. Seed rain from weeds known to be important in the diets of 17 granivorous farmland bird species was measured under the two treatments. In beet and spring oilseed rape, rain of weed seeds important in the diets of 16 bird species was significantly reduced in GMHT compared to conventional halves; for no species did it increase. In winter oilseed rape, rain of weed seeds important in the diets of 10 species was significantly reduced in GMHT halves; for only one species did it increase significantly. By contrast, in maize, rain of weed seeds important in the diets of seven species was significantly greater in GMHT halves; for no species was it reduced. Treatment effects for the total weed seed energy available to each bird species were very similar to those for seed rain alone. Measuring the effects on individual bird species was outside the scope of this study. Despite this, these results suggest that should beet, spring and winter rape crops in the UK be largely replaced by GMHT varieties and managed as in the FSEs, this would markedly reduce important food resources for farmland birds, many of which declined during the last quarter of the twentieth century. By contrast, GMHT maize would be beneficial to farmland birds. PMID:16822753

Biosafety considerations for selectable and scorable markers used in cassava (Manihot esculenta Crantz) biotechnology.

PubMed

Petersen, William; Umbeck, Paul; Hokanson, Karen; Halsey, Mark

2005-01-01

Cassava is an important subsistence crop grown only in the tropics, and represents a major source of calories for many people in developing countries. Improvements in the areas of resistance to insects and viral diseases, enhanced nutritional qualities, reduced cyanogenic content and modified starch characteristics are urgently needed. Traditional breeding is hampered by the nature of the crop, which has a high degree of heterozygosity, irregular flowering, and poor seed set. Biotechnology has the potential to enhance crop improvement efforts, and genetic engineering techniques for cassava have thus been developed over the past decade. Selectable and scorable markers are critical to efficient transformation technology, and must be evaluated for biosafety, as well as efficiency and cost-effectiveness. In order to facilitate research planning and regulatory submission, the literature on biosafety aspects of the selectable and scorable markers currently used in cassava biotechnology is surveyed. The source, mode of action and current use of each marker gene is described. The potential for toxicity, allergenicity, pleiotropic effects, horizontal gene transfer, and the impact of these on food or feed safety and environmental safety is evaluated. Based on extensive information, the selectable marker genes nptII, hpt, bar/pat, and manA, and the scorable marker gene uidA, all have little risk in terms of biosafety. These appear to represent the safest options for use in cassava biotechnology available at this time.

Transcription factors for modification of lignin content in plants

DOEpatents

Wang, Huanzhong; Chen, Fang; Dixon, Richard A.

2015-06-02

The invention provides methods for modifying lignin, cellulose, xylan, and hemicellulose content in plants, and for achieving ectopic lignification and, for instance, secondary cell wall synthesis in pith cells, by altered regulation of a WRKY transcription factor. Nucleic acid constructs for altered WRKY-TF expression are described. Transgenic plants are provided that comprise modified pith cell walls, and lignin, cellulose, and hemicellulose content. Plants described herein may be used, for example, as improved biofuel feedstock and as highly digestible forage crops.

Enhancing photosynthesis in plants: the light reactions.

PubMed

Cardona, Tanai; Shao, Shengxi; Nixon, Peter J

2018-04-13

In this review, we highlight recent research and current ideas on how to improve the efficiency of the light reactions of photosynthesis in crops. We note that the efficiency of photosynthesis is a balance between how much energy is used for growth and the energy wasted or spent protecting the photosynthetic machinery from photodamage. There are reasons to be optimistic about enhancing photosynthetic efficiency, but many appealing ideas are still on the drawing board. It is envisioned that the crops of the future will be extensively genetically modified to tailor them to specific natural or artificial environmental conditions. © 2018 The Author(s).

Competition between plant functional types in the Canadian Terrestrial Ecosystem Model (CTEM) v. 2.0

NASA Astrophysics Data System (ADS)

Melton, J. R.; Arora, V. K.

2015-06-01

The Canadian Terrestrial Ecosystem Model (CTEM) is the interactive vegetation component in the Earth system model of the Canadian Centre for Climate Modelling and Analysis. CTEM models land-atmosphere exchange of CO2 through the response of carbon in living vegetation, and dead litter and soil pools, to changes in weather and climate at timescales of days to centuries. Version 1.0 of CTEM uses prescribed fractional coverage of plant functional types (PFTs) although, in reality, vegetation cover continually adapts to changes in climate, atmospheric composition, and anthropogenic forcing. Changes in the spatial distribution of vegetation occur on timescales of years to centuries as vegetation distributions inherently have inertia. Here, we present version 2.0 of CTEM which includes a representation of competition between PFTs based on a modified version of the Lotka-Volterra (L-V) predator-prey equations. Our approach is used to dynamically simulate the fractional coverage of CTEM's seven natural, non-crop PFTs which are then compared with available observation-based estimates. Results from CTEM v. 2.0 show the model is able to represent the broad spatial distributions of its seven PFTs at the global scale. However, differences remain between modelled and observation-based fractional coverages of PFTs since representing the multitude of plant species globally, with just seven non-crop PFTs, only captures the large scale climatic controls on PFT distributions. As expected, PFTs that exist in climate niches are difficult to represent either due to the coarse spatial resolution of the model, and the corresponding driving climate, or the limited number of PFTs used. We also simulate the fractional coverages of PFTs using unmodified L-V equations to illustrate its limitations. The geographic and zonal distributions of primary terrestrial carbon pools and fluxes from the versions of CTEM that use prescribed and dynamically simulated fractional coverage of PFTs compare reasonably well with each other and observation-based estimates. The parametrization of competition between PFTs in CTEM v. 2.0 based on the modified L-V equations behaves in a reasonably realistic manner and yields a tool with which to investigate the changes in spatial distribution of vegetation in response to future changes in climate.

Competition between plant functional types in the Canadian Terrestrial Ecosystem Model (CTEM) v. 2.0

NASA Astrophysics Data System (ADS)

Melton, J. R.; Arora, V. K.

2016-01-01

The Canadian Terrestrial Ecosystem Model (CTEM) is the interactive vegetation component in the Earth system model of the Canadian Centre for Climate Modelling and Analysis. CTEM models land-atmosphere exchange of CO2 through the response of carbon in living vegetation, and dead litter and soil pools, to changes in weather and climate at timescales of days to centuries. Version 1.0 of CTEM uses prescribed fractional coverage of plant functional types (PFTs) although, in reality, vegetation cover continually adapts to changes in climate, atmospheric composition and anthropogenic forcing. Changes in the spatial distribution of vegetation occur on timescales of years to centuries as vegetation distributions inherently have inertia. Here, we present version 2.0 of CTEM, which includes a representation of competition between PFTs based on a modified version of the Lotka-Volterra (L-V) predator-prey equations. Our approach is used to dynamically simulate the fractional coverage of CTEM's seven natural, non-crop PFTs, which are then compared with available observation-based estimates. Results from CTEM v. 2.0 show the model is able to represent the broad spatial distributions of its seven PFTs at the global scale. However, differences remain between modelled and observation-based fractional coverage of PFTs since representing the multitude of plant species globally, with just seven non-crop PFTs, only captures the large-scale climatic controls on PFT distributions. As expected, PFTs that exist in climate niches are difficult to represent either due to the coarse spatial resolution of the model, and the corresponding driving climate, or the limited number of PFTs used. We also simulate the fractional coverage of PFTs using unmodified L-V equations to illustrate its limitations. The geographic and zonal distributions of primary terrestrial carbon pools and fluxes from the versions of CTEM that use prescribed and dynamically simulated fractional coverage of PFTs compare reasonably well with each other and observation-based estimates. The parametrization of competition between PFTs in CTEM v. 2.0 based on the modified L-V equations behaves in a reasonably realistic manner and yields a tool with which to investigate the changes in spatial distribution of vegetation in response to future changes in climate.

Genetically Engineered Crops and Certified Organic Agriculture for Improving Nutrition Security in Africa and South Asia.

PubMed

Pray, Carl; Ledermann, Samuel

2016-01-01

In Africa and South Asia, where nutrition insecurity is severe, two of the most prominent production technologies are genetically modified (GM) crops and certified organic agriculture. We analyze the potential impact pathways from agricultural production to nutrition. Our review of data and the literature reveals increasing farm-level income from cash crop production as the main pathway by which organic agriculture and GM agriculture improve nutrition. Potential secondary pathways include reduced prices of important food crops like maize due to GM maize production and increased food production using organic technology. Potential tertiary pathways are improvements in health due to reduced insecticide use. Challenges to the technologies achieving their impact include the politics of GM agriculture and the certification costs of organic agriculture. Given the importance of agricultural production in addressing nutrition security, accentuated by the post-2015 sustainable development agenda, the chapter concludes by stressing the importance of private and public sector research in improving the productivity and adoption of both GM and organic crops. In addition, the chapter reminds readers that increased farm income and productivity require complementary investments in health, education, food access and women's empowerment to actually improve nutrition security. © 2016 S. Karger AG, Basel.

Public Acceptance of Plant Biotechnology and GM Crops.

PubMed

Lucht, Jan M

2015-07-30

A wide gap exists between the rapid acceptance of genetically modified (GM) crops for cultivation by farmers in many countries and in the global markets for food and feed, and the often-limited acceptance by consumers. This review contrasts the advances of practical applications of agricultural biotechnology with the divergent paths-also affecting the development of virus resistant transgenic crops-of political and regulatory frameworks for GM crops and food in different parts of the world. These have also shaped the different opinions of consumers. Important factors influencing consumer's attitudes are the perception of risks and benefits, knowledge and trust, and personal values. Recent political and societal developments show a hardening of the negative environment for agricultural biotechnology in Europe, a growing discussion-including calls for labeling of GM food-in the USA, and a careful development in China towards a possible authorization of GM rice that takes the societal discussions into account. New breeding techniques address some consumers' concerns with transgenic crops, but it is not clear yet how consumers' attitudes towards them will develop. Discussions about agriculture would be more productive, if they would focus less on technologies, but on common aims and underlying values.

Quantifying the Impact of Tropospheric Ozone on Crops Productivity at regional scale using JULES-crop

NASA Astrophysics Data System (ADS)

Leung, F.

2016-12-01

Tropospheric ozone (O3) is the third most important anthropogenic greenhouse gas. It is causing significant crop production losses. Currently, O3 concentrations are projected to increase globally, which could have a significant impact on food security. The Joint UK Land Environment Simulator modified to include crops (JULES-crop) is used here to quantify the impacts of tropospheric O3 on crop production at the regional scale until 2100. We evaluate JULES-crop against the Soybean Free-Air-Concentration-Enrichment (SoyFACE) experiment in Illinois, USA. Experimental data from SoyFACE and various literature sources is used to calibrate the parameters for soybean and ozone damage parameters in soybean in JULES-crop. The calibrated model is then applied for a transient factorial set of JULES-crop simulations over 1960-2005. Simulated yield changes are attributed to individual environmental drivers, CO2, O3 and climate change, across regions and for different crops. A mixed scenario of RCP 2.6 and RCP 8.5 climatology and ozone are simulated to explore the implication of policy. The overall findings are that regions with high ozone concentration such as China and India suffer the most from ozone damage, soybean is more sensitive to O3 than other crops. JULES-crop predicts CO2 fertilisation would increase the productivity of vegetation. This effect, however, is masked by the negative impacts of tropospheric O3. Using data from FAO and JULES-crop estimated that ozone damage cost around 55.4 Billion USD per year on soybean. Irrigation improves the simulation of rice only, and it increases the relative ozone damage because drought can reduce the ozone from entering the plant stomata. RCP 8.5 scenario results in a high yield for all crops mainly due to the CO2 fertilisation effect. Mixed climate scenarios simulations suggest that RCP 8.5 CO2 concentration and RCP 2.6 O3 concentration result in the highest yield. Further works such as more crop FACE-O3 experiments and more Crop functional types in JULES are necessary. The model will thus contribute to a complete understanding of the impacts of climate change on food production. JULES will be later coupled with the Unified Model to quantify the impact of tropospheric O3 on crops productivity including feedbacks between the land-surface, atmospheric chemistry and climate change.

Advantages of using subsurface flow constructed wetlands for wastewater treatment in space applications: Ground-based mars base prototype

NASA Astrophysics Data System (ADS)

Nelson, M.; Alling, A.; Dempster, W. F.; van Thillo, M.; Allen, John

Research and design of subsurface flow wetland wastewater treatment systems for a ground-based experimental prototype Mars Base facility has been carried out, using a subsurface flow approach. These systems have distinct advantages in planetary exploration scenarios: they are odorless, relatively low-labor and low-energy, assist in purification of water and recycling of atmospheric CO2, and will support some food crops. An area of 6-8 m2 may be sufficient for integration of wetland wastewater treatment with a prototype Mars Base supporting 4-5 people. Discharge water from the wetland system will be used as irrigation water for the agricultural crop area, thus ensuring complete recycling and utilization of nutrients. Since the primary requirements for wetland treatment systems are warm temperatures and lighting, such bioregenerative systems may be integrated into early Mars base habitats, since waste heat from the lights may be used for temperature maintenance in the human living environment. "Wastewater gardens ™" can be modified for space habitats to lower space and mass requirements. Many of its construction requirements can eventually be met with use of in-situ materials, such as gravel from the Mars surface. Because the technology requires little machinery and no chemicals, and relies more on natural ecological mechanisms (microbial and plant metabolism), maintenance requirements are minimized, and systems can be expected to have long operating lifetimes. Research needs include suitability of Martian soil and gravel for wetland systems, system sealing and liner options in a Mars Base, and wetland water quality efficiency under varying temperature and light regimes.

Fitness and beyond: preparing for the arrival of GM crops with ecologically important novel characters.

PubMed

Wilkinson, Mike; Tepfer, Mark

2009-01-01

The seemingly inexorable expansion of global human population size, significant increases in the use of biofuel crops and the growing pressures of multifunctional land-use have intensified the need to improve crop productivity. The widespread cultivation of high-yielding genetically modified (GM) crops could help to address these problems, although in doing so, steps must also be taken to ensure that any gene flow from these crops to wild or weedy recipients does not cause significant ecological harm. It is partly for this reason that new GM cultivars are invariably subjected to strict regulatory evaluation in order to assess the risks that each may pose to the environment. Regulatory bodies vary in their approach to decision-making, although all require access to large quantities of detailed information. Such an exhaustive case-by-case approach has been made tractable by the comparative simplicity of the portfolio of GM crops currently on the market, with four crops and two classes of traits accounting for almost all of the area under cultivation of GM crops. This simplified situation will change shortly, and will seriously complicate and potentially slow the evaluation process. Nowhere will the increased diversity of GM crops cause more difficulty to regulators than in those cases where there is a need to assess whether the transgene(s) will enhance fitness in a non-transgenic relative and thereafter cause ecological harm. Current practice to test this risk hypothesis focuses on attempting to detect increased fitness in the recipient. In this paper we explore the merits and shortcomings of this strategy, and investigate the scope for developing new approaches to streamline decision-making processes for transgenes that could cause unwanted ecological change.

[Progress on biosafety assessment of marker genes in genetically modified foods].

PubMed

Yang, Lichen; Yang, Xiaoguang

2003-05-01

Marker genes are useful in facilitating the detection of genetically modified organisms(GMO). These genes play an important role during the early identification stage of GMO development, but they exist in the mature genetically modified crops. So the safety assessment of these genes could not be neglected. In this paper, all the study on the biosafety assessment of marker genes were reviewed, their possible hazards and risks were appraised, and the marker genes proved safe were list too. GMO Labeling the is one important regulations for the development of genetically modified foods in the market. The accurate detecting techniques for GMO are the basis for setting up labeling regulation. In addition, some methods used to remove marker genes in genetically modified foods were introduced in the paper, which can eliminate their biosafety concern thoroughly.

Micro-nanopores fabricated by high-energy electron beam irradiation: suitable structure for controlling pesticide loss.

PubMed

Xiang, Yubin; Wang, Ning; Song, Jimei; Cai, Dongqing; Wu, Zhengyan

2013-06-05

Pesticide sprayed onto crop leaves tends to be washed off by rainwater and discharge into the environment through leaching and runoff, resulting in severe pollution to both soil and water. Here, to control pesticide loss, we developed a loss-control pesticide (LCP) by adding modified natural nanoclay (diatomite) through high-energy electron beam (HEEB) to traditional pesticide. After HEEB treatment, the originally clogged pores in diatomite opened, resulting in plenty of micro-nanopores in diatomite, which are beneficial for the pesticide molecules to access and be adsorbed. This pesticide-diatomite complex tended to be retained by the rough surface of crop leaves, displaying a high adhesion performance onto the leaves, so that the pesticide loss reduced, sufficient pesticide for crops was supplied, and the pollution risk of the pesticide could be substantially lowered.

Improvement of photosynthesis in rice (Oryza sativa L.) by inserting the C4 pathway.

PubMed

Karki, Shanta; Rizal, Govinda; Quick, William Paul

2013-10-28

To boost food production for a rapidly growing global population, crop yields must significantly increase. One of the avenues being recently explored is the improvement of photosynthetic capacity by installing the C4 photosynthetic pathway into C3 crops like rice to drastically increase their yield. Crops with an enhanced photosynthetic mechanism would better utilize the solar radiation that can be translated into yield. This subsequently will help in producing more grain yield, reduce water loss and increase nitrogen use efficiency especially in hot and dry environments. This review provides a summary of the factors that need to be modified in rice so that the C4 pathway can be introduced successfully. It also discusses the differences between the C3 and C4 photosynthetic pathways in terms of anatomy, biochemistry and genetics.

CWEX (Crop/Wind-Energy Experiment): Measurements of the interaction between crop agriculture and wind power

NASA Astrophysics Data System (ADS)

Rajewski, Daniel Andrew

The current expansion of wind farms in the U.S. Midwest promotes an alternative renewable energy portfolio to conventional energy sources derived from fossil fuels. The construction of wind turbines and large wind farms within several millions of cropland acres creates a unique interaction between two unlike energy sources: electric generation by wind and bio-fuel production derived from crop grain and plant tissues. Wind turbines produce power by extracting mean wind speed and converting a portion of the flow to turbulence downstream of each rotor. Turbine-scale turbulence modifies fluxes of momentum, heat, moisture, and other gaseous constituents (e.g. carbon dioxide) between the crop canopy and the atmospheric boundary layer. Conversely, crop surfaces and tillage elements produce drag on the hub-height wind resource, and the release of sensible and latent heat flux from the canopy or soil influences the wind speed profile. The Crop-Wind Energy Experiment (CWEX) measured momentum, energy, and CO2 fluxes at several locations within the leading line of turbines in a large operational wind farm, and overall turbines promote canopy mixing of wind speed, temperature, moisture, and carbon dioxide in both the day and night. Turbine-generated perturbations of these fluxes are dependent on several factors influencing the turbine operation (e.g. wind speed, wind direction, stability, orientation of surrounding turbines within a wind park) and the cropland surface (e.g. crop type and cultivar, planting density, chemical application, and soil composition and drainage qualities). Additional strategies are proposed for optimizing the synergy between crop and wind power.

Field windbreaks for bioenergy production and carbon sequestration

USDA-ARS?s Scientific Manuscript database

Tree windbreaks are a multi-benefit land use with the ability to mitigate climate change by modifying the local microclimate for improved crop growth and sequestering carbon in soil and biomass. Agroforestry practices are also being considered for bioenergy production by direct combustion or produci...

Chemo-enzymatic synthesis of physiologically modified avenanthramides

USDA-ARS?s Scientific Manuscript database

Avenanthramides are a group of phenolic alkaloids produced, among food crops, uniquely by oats. These metabolites function as phytoalexins in vegetative tissue and they are produced in the grain where their function is unknown. In vitro the avenanthramides inhibit the activation of nuclear factor ka...

Crop Producer. Ohio's Competency Analysis Profile.

ERIC Educational Resources Information Center

Ohio State Univ., Columbus. Vocational Instructional Materials Lab.

This comprehensive and verified employer competency list was developed from a modified DACUM (Developing a Curriculum) process involving business, industry, labor, and community agency representatives from Ohio. This competency list contains six units (with or without subunits), competencies, and competency builders that identify the occupational,…

GENE FLOW STUDIES BETWEEN BRASSICA NAPUS AND B. RAPA IN CONSTRUCTED PLANT COMMUNITIES

EPA Science Inventory

The commercial production of genetically modified crops has led to a growing awareness of the difficulties of transgene confinement and of the potential environmental risks associated with the escape of transgenes into naturalized or native plant populations. A potential conseque...

Genetically modified organisms in the United States: implementation, concerns, and public perception.

PubMed

Oeschger, Max P; Silva, Catherine E

2007-01-01

We examine the state of biotechnology with respect to genetically modified (GM) organisms in agriculture. Our focus is on the USA, where there has been significant progress and implementation but where, to date, the matter has drawn little attention. GM organisms are the result of lateral gene transfers, the transfer of genes from one species to another, or sometimes, from one kingdom to another. The introduction of foreign genes makes some people very uncomfortable, and a small group of activists have grave concerns about the technology. Attempts by activists to build concern in the general public have garnered little attention; however, the producers of GM organisms have responded to their concerns and established extensive testing programs to be applied to each candidate organism that is produced. In the meantime, GM varieties of corn, cotton, soybean and rapeseed have been put into agricultural production and are now extensively planted. These crops, and the other, newer GM crops, have produced no problems and have pioneered a silent agricultural revolution in the USA.

Multi-temporal UAV based data for mapping crop type and structure in smallholder dominated Tanzanian agricultural landscape

NASA Astrophysics Data System (ADS)

Nagol, J. R.; Chung, C.; Dempewolf, J.; Maurice, S.; Mbungu, W.; Tumbo, S.

2015-12-01

Timely mapping and monitoring of crops like Maize, an important food security crop in Tanzania, can facilitate timely response by government and non-government organizations to food shortage or surplus conditions. Small UAVs can play an important role in linking the spaceborne remote sensing data and ground based measurement to improve the calibration and validation of satellite based estimates of in-season crop metrics. In Tanzania most of the growing season is often obscured by clouds. UAV data, if collected within a stratified statistical sampling framework, can also be used to directly in lieu of spaceborne data to infer mid-season yield estimates at regional scales.Here we present an object based approach to estimate crop metrics like crop type, area, and height using multi-temporal UAV based imagery. The methods were tested at three 1km2 plots in Kilosa, Njombe, and Same districts in Tanzania. At these sites both ground based and UAV based data were collected on a monthly time-step during the year 2015 growing season. SenseFly eBee drone with RGB and NIR-R-G camera was used to collect data. Crop type classification accuracies of above 85% were easily achieved.

Monitoring Global Crop Condition Indicators Using a Web-Based Visualization Tool

Treesearch

Bob Tetrault; Bob Baldwin

2006-01-01

Global crop condition information for major agricultural regions in the world can be monitored using the web-based application called Crop Explorer. With this application, U.S. and international producers, traders, researchers, and the public can access remote sensing information used by agricultural economists and scientists who predict crop production worldwide. For...

Limited irrigation of corn-based no-till crop rotations in west central Great Plains.

USDA-ARS?s Scientific Manuscript database

Identifying the most profitable crop rotation for an area is a continuous research challenge. The objective of this study was to evaluate 2, 3, and 4 yr. limited irrigation corn (Zea mays L.) based crop rotations for grain yield, available soil water, crop water productivity, and profitability in co...

Crops Models for Varying Environmental Conditions

NASA Technical Reports Server (NTRS)

Jones, Harry; Cavazzoni, James; Keas, Paul

2001-01-01

New variable environment Modified Energy Cascade (MEC) crop models were developed for all the Advanced Life Support (ALS) candidate crops and implemented in SIMULINK. The MEC models are based on the Volk, Bugbee, and Wheeler Energy Cascade (EC) model and are derived from more recent Top-Level Energy Cascade (TLEC) models. The MEC models simulate crop plant responses to day-to-day changes in photosynthetic photon flux, photoperiod, carbon dioxide level, temperature, and relative humidity. The original EC model allows changes in light energy but uses a less accurate linear approximation. The simulation outputs of the new MEC models for constant nominal environmental conditions are very similar to those of earlier EC models that use parameters produced by the TLEC models. There are a few differences. The new MEC models allow setting the time for seed emergence, have realistic exponential canopy growth, and have corrected harvest dates for potato and tomato. The new MEC models indicate that the maximum edible biomass per meter squared per day is produced at the maximum allowed carbon dioxide level, the nominal temperatures, and the maximum light input. Reducing the carbon dioxide level from the maximum to the minimum allowed in the model reduces crop production significantly. Increasing temperature decreases production more than it decreases the time to harvest, so productivity in edible biomass per meter squared per day is greater at nominal than maximum temperatures, The productivity in edible biomass per meter squared per day is greatest at the maximum light energy input allowed in the model, but the edible biomass produced per light energy input unit is lower than at nominal light levels. Reducing light levels increases light and power use efficiency. The MEC models suggest we can adjust the light energy day-to- day to accommodate power shortages or Lise excess power while monitoring and controlling edible biomass production.

Definition and feasibility of isolation distances for transgenic maize cultivation.

PubMed

Sanvido, Olivier; Widmer, Franco; Winzeler, Michael; Streit, Bernhard; Szerencsits, Erich; Bigler, Franz

2008-06-01

A major concern related to the adoption of genetically modified (GM) crops in agricultural systems is the possibility of unwanted GM inputs into non-GM crop production systems. Given the increasing commercial cultivation of GM crops in the European Union (EU), there is an urgent need to define measures to prevent mixing of GM with non-GM products during crop production. Cross-fertilization is one of the various mechanisms that could lead to GM-inputs into non-GM crop systems. Isolation distances between GM and non-GM fields are widely accepted to be an effective measure to reduce these inputs. However, the question of adequate isolation distances between GM and non-GM maize is still subject of controversy both amongst scientists and regulators. As several European countries have proposed largely differing isolation distances for maize ranging from 25 to 800 m, there is a need for scientific criteria when using cross-fertilization data of maize to define isolation distances between GM and non-GM maize. We have reviewed existing cross-fertilization studies in maize, established relevant criteria for the evaluation of these studies and applied these criteria to define science-based isolation distances. To keep GM-inputs in the final product well below the 0.9% threshold defined by the EU, isolation distances of 20 m for silage and 50 m for grain maize, respectively, are proposed. An evaluation using statistical data on maize acreage and an aerial photographs assessment of a typical agricultural landscape by means of Geographic Information Systems (GIS) showed that spatial resources would allow applying the defined isolation distances for the cultivation of GM maize in the majority of the cases under actual Swiss agricultural conditions. The here developed approach, using defined criteria to consider the agricultural context of maize cultivation, may be of assistance for the analysis of cross-fertilization data in other countries.

Comparative diversity of arthropods on Bt maize and non-Bt maize in two different cropping systems in South Africa.

PubMed

Truter, J; Van Hamburg, H; Van Den Berg, J

2014-02-01

The biodiversity of an agroecosystem is not only important for its intrinsic value but also because it influences ecological functions that are vital for crop production in sustainable agricultural systems and the surrounding environment. A concern about genetically modified (GM) crops is the potential negative impact that such crops could have on diversity and abundance of nontarget organisms, and subsequently on ecosystem functions. Therefore, it is essential to assess the potential environmental risk of the release of a GM crop and to study its effect on species assemblages within that ecosystem. Assessment of the impact of Bt maize on the environment is hampered by the lack of basic checklists of species present in maize agroecosystems. The aims of the study were to compile a checklist of arthropods that occur on maize in South Africa and to compare the diversity and abundance of arthropods and functional groups on Bt maize and non-Bt maize. Collections of arthropods were carried out during two growing seasons on Bt maize and non-Bt maize plants at two localities. Three maize fields were sampled per locality during each season. Twenty plants, each of Bt maize and non-Bt maize, were randomly selected from the fields at each site. The arthropods collected during this study were classified to morphospecies level and grouped into the following functional groups: detritivores, herbivores, predators, and parasitoids. Based on feeding strategy, herbivores and predators were further divided into sucking herbivores or predators (piercing-sucking mouthparts) and chewing herbivores or predators (chewing mouthparts). A total of 8,771 arthropod individuals, comprising 288 morphospecies and presenting 20 orders, were collected. Results from this short-term study indicated that abundance and diversity of arthropods in maize and the different functional guilds were not significantly affected by Bt maize, either in terms of diversity or abundance.

Crop monitoring & yield forecasting system based on Synthetic Aperture Radar (SAR) and process-based crop growth model: Development and validation in South and South East Asian Countries

NASA Astrophysics Data System (ADS)

Setiyono, T. D.

2014-12-01

Accurate and timely information on rice crop growth and yield helps governments and other stakeholders adapting their economic policies and enables relief organizations to better anticipate and coordinate relief efforts in the wake of a natural catastrophe. Such delivery of rice growth and yield information is made possible by regular earth observation using space-born Synthetic Aperture Radar (SAR) technology combined with crop modeling approach to estimate yield. Radar-based remote sensing is capable of observing rice vegetation growth irrespective of cloud coverage, an important feature given that in incidences of flooding the sky is often cloud-covered. The system allows rapid damage assessment over the area of interest. Rice yield monitoring is based on a crop growth simulation and SAR-derived key information, particularly start of season and leaf growth rate. Results from pilot study sites in South and South East Asian countries suggest that incorporation of SAR data into crop model improves yield estimation for actual yields. Remote-sensing data assimilation into crop model effectively capture responses of rice crops to environmental conditions over large spatial coverage, which otherwise is practically impossible to achieve. Such improvement of actual yield estimates offers practical application such as in a crop insurance program. Process-based crop simulation model is used in the system to ensure climate information is adequately captured and to enable mid-season yield forecast.

A crops and soils data base for scene radiation research

NASA Technical Reports Server (NTRS)

Biehl, L. L.; Bauer, M. E.; Robinson, B. F.; Daughtry, C. S. T.; Silva, L. F.; Pitts, D. E.

1982-01-01

Management and planning activities with respect to food production require accurate and timely information on crops and soils on a global basis. The needed information can be obtained with the aid of satellite-borne sensors, if the relations between the spectral properties and the important biological-physical parameters of crops and soils are known. In order to obtain this knowledge, the development of a crops and soils scene radiation research data base was initiated. Work related to the development of this data base is discussed, taking into account details regarding the conducted experiments, the performed measurements, the calibration of spectral data, questions of data base access, and the expansion of the crops and soils scene radiation data base for 1982.

Replacing fallow with continuous cropping reduces crop water productivity of semiarid wheat

USDA-ARS?s Scientific Manuscript database

Water supply frequently limits crop yield in semiarid cropping systems; water deficits can restrict yields in drought-affected subhumid regions. In semiarid wheat (Triticum aestivumL.)-based cropping systems, replacing an uncropped fallow period with a crop can increase precipitation use efficiency ...

Mitigation of indirect environmental effects of GM crops

PubMed Central

Pidgeon, J.D; May, M.J; Perry, J.N; Poppy, G.M

2007-01-01

Currently, the UK has no procedure for the approval of novel agricultural practices that is based on environmental risk management principles. Here, we make a first application of the ‘bow-tie’ risk management approach in agriculture, for assessment of land use changes, in a case study of the introduction of genetically modified herbicide tolerant (GMHT) sugar beet. There are agronomic and economic benefits, but indirect environmental harm from increased weed control is a hazard. The Farm Scale Evaluation (FSE) trials demonstrated reduced broad-leaved weed biomass and seed production at the field scale. The simplest mitigation measure is to leave a proportion of rows unsprayed in each GMHT crop field. Our calculations, based on FSE data, show that a maximum of 2% of field area left unsprayed is required to mitigate weed seed production and 4% to mitigate weed biomass production. Tilled margin effects could simply be mitigated by increasing the margin width from 0.5 to 1.5 m. Such changes are cheap and simple to implement in farming practices. This case study demonstrates the usefulness of the bow-tie risk management approach and the transparency with which hazards can be addressed. If adopted generally, it would help to enable agriculture to adopt new practices with due environmental precaution. PMID:17439853

Ground penetrating radar for underground sensing in agriculture: a review

NASA Astrophysics Data System (ADS)

Liu, Xiuwei; Dong, Xuejun; Leskovar, Daniel I.

2016-10-01

Belowground properties strongly affect agricultural productivity. Traditional methods for quantifying belowground properties are destructive, labor-intensive and pointbased. Ground penetrating radar can provide non-invasive, areal, and repeatable underground measurements. This article reviews the application of ground penetrating radar for soil and root measurements and discusses potential approaches to overcome challenges facing ground penetrating radar-based sensing in agriculture, especially for soil physical characteristics and crop root measurements. Though advanced data-analysis has been developed for ground penetrating radar-based sensing of soil moisture and soil clay content in civil engineering and geosciences, it has not been used widely in agricultural research. Also, past studies using ground penetrating radar in root research have been focused mainly on coarse root measurement. Currently, it is difficult to measure individual crop roots directly using ground penetrating radar, but it is possible to sense root cohorts within a soil volume grid as a functional constituent modifying bulk soil dielectric permittivity. Alternatively, ground penetrating radarbased sensing of soil water content, soil nutrition and texture can be utilized to inversely estimate root development by coupling soil water flow modeling with the seasonality of plant root growth patterns. Further benefits of ground penetrating radar applications in agriculture rely on the knowledge, discovery, and integration among differing disciplines adapted to research in agricultural management.

Peptide aptamers: The versatile role of specific protein function inhibitors in plant biotechnology.

PubMed

Colombo, Monica; Mizzotti, Chiara; Masiero, Simona; Kater, Martin M; Pesaresi, Paolo

2015-11-01

In recent years, peptide aptamers have emerged as novel molecular tools that have attracted the attention of researchers in various fields of basic and applied science, ranging from medicine to analytical chemistry. These artificial short peptides are able to specifically bind, track, and inhibit a given target molecule with high affinity, even molecules with poor immunogenicity or high toxicity, and represent a remarkable alternative to antibodies in many different applications. Their use is on the rise, driven mainly by the medical and pharmaceutical sector. Here we discuss the enormous potential of peptide aptamers in both basic and applied aspects of plant biotechnology and food safety. The different peptide aptamer selection methods available both in vivo and in vitro are introduced, and the most important possible applications in plant biotechnology are illustrated. In particular, we discuss the generation of broad-based virus resistance in crops, "reverse genetics" and aptasensors in bioassays for detecting contaminations in food and feed. Furthermore, we suggest an alternative to the transfer of peptide aptamers into plant cells via genetic transformation, based on the use of cell-penetrating peptides that overcome the limits imposed by both crop transformation and Genetically Modified Organism commercialization. © 2015 Institute of Botany, Chinese Academy of Sciences.

Estimating the impact of mineral aerosols on crop yields in food insecure regions using statistical crop models

NASA Astrophysics Data System (ADS)

Hoffman, A.; Forest, C. E.; Kemanian, A.

2016-12-01

A significant number of food-insecure nations exist in regions of the world where dust plays a large role in the climate system. While the impacts of common climate variables (e.g. temperature, precipitation, ozone, and carbon dioxide) on crop yields are relatively well understood, the impact of mineral aerosols on yields have not yet been thoroughly investigated. This research aims to develop the data and tools to progress our understanding of mineral aerosol impacts on crop yields. Suspended dust affects crop yields by altering the amount and type of radiation reaching the plant, modifying local temperature and precipitation. While dust events (i.e. dust storms) affect crop yields by depleting the soil of nutrients or by defoliation via particle abrasion. The impact of dust on yields is modeled statistically because we are uncertain which impacts will dominate the response on national and regional scales considered in this study. Multiple linear regression is used in a number of large-scale statistical crop modeling studies to estimate yield responses to various climate variables. In alignment with previous work, we develop linear crop models, but build upon this simple method of regression with machine-learning techniques (e.g. random forests) to identify important statistical predictors and isolate how dust affects yields on the scales of interest. To perform this analysis, we develop a crop-climate dataset for maize, soybean, groundnut, sorghum, rice, and wheat for the regions of West Africa, East Africa, South Africa, and the Sahel. Random forest regression models consistently model historic crop yields better than the linear models. In several instances, the random forest models accurately capture the temperature and precipitation threshold behavior in crops. Additionally, improving agricultural technology has caused a well-documented positive trend that dominates time series of global and regional yields. This trend is often removed before regression with traditional crop models, but likely at the cost of removing climate information. Our random forest models consistently discover the positive trend without removing any additional data. The application of random forests as a statistical crop model provides insight into understanding the impact of dust on yields in marginal food producing regions.

Soil quality and the solar corridor crop system

USDA-ARS?s Scientific Manuscript database

The solar corridor crop system (SCCS) is designed for improved crop productivity based on highly efficient use of solar radiation by integrating row crops with drilled or solid-seeded crops in broad strips (corridors) that also facilitate establishment of cover crops for year-round soil cover. The S...

Soil Quality and the Solar Corridor Crop System

USDA-ARS?s Scientific Manuscript database

The solar corridor crop system (SCCS) is designed for improved crop productivity based on highly efficient use of solar radiation by integrating row crops with drilled or solid-seeded crops in broad strips (corridors) that also facilitate establishment of cover crops for year-round soil cover. The S...

DNA barcoding simplifies environmental risk assessment of genetically modified crops in biodiverse regions.

PubMed

Nzeduru, Chinyere V; Ronca, Sandra; Wilkinson, Mike J

2012-01-01

Transgenes encoding for insecticidal crystal (Cry) proteins from the soil-dwelling bacterium Bacillus Thuringiensis have been widely introduced into Genetically Modified (GM) crops to confer protection against insect pests. Concern that these transgenes may also harm beneficial or otherwise valued insects (so-called Non Target Organisms, NTOs) represents a major element of the Environmental Risk Assessments (ERAs) used by all countries prior to commercial release. Compiling a comprehensive list of potentially susceptible NTOs is therefore a necessary part of an ERA for any Cry toxin-containing GM crop. In partly-characterised and biodiverse countries, NTO identification is slowed by the need for taxonomic expertise and time to enable morphological identifications. This limitation represents a potentially serious barrier to timely adoption of GM technology in some developing countries. We consider Bt Cry1A cowpea (Vigna unguiculata) in Nigeria as an exemplar to demonstrate how COI barcoding can provide a simple and cost-effective means of addressing this problem. Over a period of eight weeks, we collected 163 insects from cowpea flowers across the agroecological and geographic range of the crop in Nigeria. These individuals included 32 Operational Taxonomic Units (OTUs) spanning four Orders and that could mostly be assigned to genus or species level. They included 12 Lepidopterans and two Coleopterans (both potentially sensitive to different groups of Cry proteins). Thus, barcode-assisted diagnoses were highly harmonised across groups (typically to genus or species level) and so were insensitive to expertise or knowledge gaps. Decisively, the entire study was completed within four months at a cost of less than 10,000 US$. The broader implications of the findings for food security and the capacity for safe adoption of GM technology are briefly explored.

RF-CLASS: A Remote-sensing-based Interoperable Web service system for Flood Crop Loss Assessment

NASA Astrophysics Data System (ADS)

Di, L.; Yu, G.; Kang, L.

2014-12-01

Flood is one of the worst natural disasters in the world. Flooding often causes significant crop loss over large agricultural areas in the United States. Two USDA agencies, the National Agricultural Statistics Service (NASS) and Risk Management Agency (RMA), make decisions on flood statistics, crop insurance policy, and recovery management by collecting, analyzing, reporting, and utilizing flooded crop acreage and crop loss information. NASS has the mandate to report crop loss after all flood events. RMA manages crop insurance policy and uses crop loss information to guide the creation of the crop insurance policy and the aftermath compensation. Many studies have been conducted in the recent years on monitoring floods and assessing the crop loss due to floods with remote sensing and geographic information technologies. The Remote-sensing-based Flood Crop Loss Assessment Service System (RF-CLASS), being developed with NASA and USDA support, aims to significantly improve the post-flood agricultural decision-making supports in USDA by integrating and advancing the recently developed technologies. RF-CLASS will operationally provide information to support USDA decision making activities on collecting and archiving flood acreage and duration, recording annual crop loss due to flood, assessing the crop insurance rating areas, investigating crop policy compliance, and spot checking of crop loss claims. This presentation will discuss the remote sensing and GIS based methods for deriving the needed information to support the decision making, the RF-CLASS cybersystem architecture, the standards and interoperability arrangements in the system, and the current and planned capabilities of the system.

Keeping soil in the field - runoff and erosion management in asparagus crops

NASA Astrophysics Data System (ADS)

Niziolomski, Joanna; Simmons, Robert; Rickson, Jane; Hann, Mike

2016-04-01

Row crop production (including potatoes, onions, carrots, asparagus, bulbs and lettuce) is regarded as one of the most erosive agricultural cropping systems. This is a result of the many practices involved that increase erosion risk including: fine seedbed preparation, a typically short growing season where adequate ground cover protects the soil, permanent bare soil areas between crops, and often intensive harvesting methods that can damage soil structure and result in soil compaction. Sustained exposure of bare soil coupled with onsite compaction on slightly sloping land results in soil and water issues in asparagus production. Asparagus production is a growing British industry covering > 2000 ha and is worth approximately £30 million yr-1. However, no tried and tested erosion control measurements currently exist to manage associated problems. Research has recently been undertaken investigating the effectiveness of erosion control measures suitable for asparagus production systems. These consisted of surface applied wheat straw mulch and shallow soil disturbance (< 350 mm) using several tine configurations: a currently adopted winged tine, a narrow with two shallow leading tines, and a modified para-plough. These treatments were tested individually and in combination (straw mulch with each shallow soil disturbance tine configuration) using triplicated field plots situated on a working asparagus farm in Herefordshire, UK. Testing was conducted between May and November 2013. Rainfall-event based runoff and erosion measurements were taken including; runoff volume, runoff rate and total soil loss. Runoff and soil erosion was observed from all treatments. However, the surface application of straw mulch alone out performed each shallow soil disturbance practice. This suggests that runoff and erosion from asparagus production can be reduced using the simple surface application of straw.

Vegetation index-based crop coefficients to estimate evapotranspiration by remote sensing in agricultural and natural ecosystems

USGS Publications Warehouse

Glenn, E.P.; Neale, C. M. U.; Hunsaker, D.J.; Nagler, P.L.

2011-01-01

Crop coefficients were developed to determine crop water needs based on the evapotranspiration (ET) of a reference crop under a given set of meteorological conditions. Starting in the 1980s, crop coefficients developed through lysimeter studies or set by expert opinion began to be supplemented by remotely sensed vegetation indices (VI) that measured the actual status of the crop on a field-by-field basis. VIs measure the density of green foliage based on the reflectance of visible and near infrared (NIR) light from the canopy, and are highly correlated with plant physiological processes that depend on light absorption by a canopy such as ET and photosynthesis. Reflectance-based crop coefficients have now been developed for numerous individual crops, including corn, wheat, alfalfa, cotton, potato, sugar beet, vegetables, grapes and orchard crops. Other research has shown that VIs can be used to predict ET over fields of mixed crops, allowing them to be used to monitor ET over entire irrigation districts. VI-based crop coefficients can help reduce agricultural water use by matching irrigation rates to the actual water needs of a crop as it grows instead of to a modeled crop growing under optimal conditions. Recently, the concept has been applied to natural ecosystems at the local, regional and continental scales of measurement, using time-series satellite data from the MODIS sensors on the Terra satellite. VIs or other visible-NIR band algorithms are combined with meteorological data to predict ET in numerous biome types, from deserts, to arctic tundra, to tropical rainforests. These methods often closely match ET measured on the ground at the global FluxNet array of eddy covariance moisture and carbon flux towers. The primary advantage of VI methods for estimating ET is that transpiration is closely related to radiation absorbed by the plant canopy, which is closely related to VIs. The primary disadvantage is that they cannot capture stress effects or soil evaporation. Copyright ?? 2011 John Wiley & Sons, Ltd.

Endophytic Fungi in a Hordeum Germplasm Collection

Treesearch

A. Dan Wilson; S.L. Clement; W.J. Kaiser

1991-01-01

The incidence of clavicipitaceous anamorphic endophytes in a Hordeum spp. germplasm collection is reported. The potential application of endophytes as biocontrol agents against pests of cereal crops is recognized. Suggestions are proposed to modify existing germplasm maintenance procedures to ensure that both seed viability and endophyte viability...

Crop systems and plant roots can modify the soil water holding capacity

NASA Astrophysics Data System (ADS)

Doussan, Claude; Cousin, Isabelle; Berard, Annette; Chabbi, Abad; Legendre, Laurent; Czarnes, Sonia; Toussaint, Bruce; Ruy, Stéphane

2015-04-01

At the interface between atmosphere and deep sub-soil, the root zone plays a major role in regulating the flow of water between major compartments: groundwater / surface / atmosphere (drainage, runoff, evapotranspiration). This role of soil as regulator/control of water fluxes, but also as a supporting medium to plant growth, is strongly dependent on the hydric properties of the soil. In turn, the plant roots growing in the soil can change its structure; both in the plow layer and in the deeper horizons and, therefore, could change the soil properties, particularly hydric properties. Such root-related alteration of soil properties can be linked to direct effect of roots such as soil perforation during growth, aggregation of soil particles or indirect effects such as the release of exudates by roots that could modify the properties of water or of soil particles. On an another hand, the rhizosphere, the zone around roots influenced by the activity of root and associated microorganisms, could have a high influence on hydric properties, particularly the water retention. To test if crops and plant roots rhizosphere may have a significant effect on water retention, we conducted various experiment from laboratory to field scales. In the lab, we tested different soil and species for rhizospheric effect on soil water retention. Variation in available water content (AWC) between bulk and rhizospheric soil varied from non-significant to a significant increase (to about 16% increase) depending on plant species and soil type. In the field, the alteration of water retention by root systems was tested in different pedological settings for a Maize crop inoculated or not with the bacteria Azospirillum spp., known to alter root structure, growth and morphology. Again, a range of variation in AWC was evidenced, with significant increase (~30%) in some soil types, but more linked to innoculated/non-innoculated plants rather than to a difference between rhizospheric and bulk soil. Finally, in field condition, on a larger time scale, we investigated the effect of crop alternations on the Lusignan ACBB SOERE site. That site presents on the same soil type different crop alternation treatments: an old, continuous grassland, a 8-year continuous cereal rotation and an alternation of cereal/grassland (3-years cereals and 3 to 6 years grassland). Measurements of AWC in these different crop systems setting, 8 years after implementation of the SOERE, show that AWC was different in the cereal/grassland alternation compared to the continuous cereal or grassland cropping systems (~15-20% increase). If such alteration of AWC may seem modest, modeling (in the case of ACBB SOERE) shows that this increase in AWC would increase the cereal yield but also decrease the water drainage out of the root zone, and the possible associated loss of nitrate and pesticides. As a conclusion, in line with some other literature data, roots can influence soil hydric properties and this opens a way to use plants as "soil engineers" to modulate the properties of the root zone, and thus the components of water balance, to mitigate effects of drought on crops… However, how and how much plants will modify the hydric properties, a question which mixes physics, biology, microbiology, crop system settings, is still in infancy and needs further research.

Physiological limits to zinc biofortification of edible crops.

PubMed

White, Philip J; Broadley, Martin R

2011-01-01

It has been estimated that one-third of the world's population lack sufficient Zn for adequate nutrition. This can be alleviated by increasing dietary Zn intakes through Zn biofortification of edible crops. Biofortification strategies include the application of Zn-fertilizers and the development of crop genotypes that acquire more Zn from the soil and accumulate it in edible portions. Zinc concentrations in roots, leaves, and stems can be increased through the application of Zn-fertilizers. Root Zn concentrations of up to 500-5000 mg kg(-1) dry matter (DM), and leaf Zn concentrations of up to 100-700 mg kg(-1) DM, can be achieved without loss of yield when Zn-fertilizers are applied to the soil. It is possible that greater Zn concentrations in non-woody shoot tissues can be achieved using foliar Zn-fertilizers. By contrast, Zn concentrations in fruits, seeds, and tubers are severely limited by low Zn mobility in the phloem and Zn concentrations higher than 30-100 mg kg(-1) DM are rarely observed. However, genetically modified plants with improved abilities to translocate Zn in the phloem might be used to biofortify these phloem-fed tissues. In addition, genetically modified plants with increased tolerance to high tissue Zn concentrations could be used to increase Zn concentrations in all edible produce and, thereby, increase dietary Zn intakes.

Research on the autumn irrigation schedule of Hetao Irrigation District of China

NASA Astrophysics Data System (ADS)

Han, Y.

2016-12-01

Salinization of soil has great influence on the function of crop land, leading to the crop failure to some extent. One of the inducement of salinization is that the water pressure of frozen soil is lower than that of unfrozen, salt is drew up to the frozen layer along with water during the freezing process. To prevent the salinization of soil, people carry out the autumn irrigation in Hetao Irrigation District which located is located in Bayannur City, Inner Mongolia, north of China. Autumn irrigation is an irrigation event before the freezing of soil, the function of autumn irrigation includes soil moisture conservation, loosening the soil and leaching the salt. Among all the crop models, none is designed to simulate the water and salt movement during freezing and thawing progress. So In this study, SWAP (Soil Water Atmosphere Plant) model is modified by adding the freezing and thawing module which enable the model to take into consideration the effect of freezing and thawing on water and salt movement. After validating the modified model using field data and lab test results, the model was used to simulate the results of various autumn irrigation schedules, exploring the influence of different autumn irrigation amounts on the water, salt and heat condition and transportation of soil. Finally, proper autumn irrigation schedule was obtained to instruct the production of Hetao Irrigation District.

Weather-based forecasts of California crop yields

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lobell, D B; Cahill, K N; Field, C B

2005-09-26

Crop yield forecasts provide useful information to a range of users. Yields for several crops in California are currently forecast based on field surveys and farmer interviews, while for many crops official forecasts do not exist. As broad-scale crop yields are largely dependent on weather, measurements from existing meteorological stations have the potential to provide a reliable, timely, and cost-effective means to anticipate crop yields. We developed weather-based models of state-wide yields for 12 major California crops (wine grapes, lettuce, almonds, strawberries, table grapes, hay, oranges, cotton, tomatoes, walnuts, avocados, and pistachios), and tested their accuracy using cross-validation over themore » 1980-2003 period. Many crops were forecast with high accuracy, as judged by the percent of yield variation explained by the forecast, the number of yields with correctly predicted direction of yield change, or the number of yields with correctly predicted extreme yields. The most successfully modeled crop was almonds, with 81% of yield variance captured by the forecast. Predictions for most crops relied on weather measurements well before harvest time, allowing for lead times that were longer than existing procedures in many cases.« less

[Wildlife damage mitigation in agricultural crops in a Bolivian montane forest].

PubMed

Perez, Eddy; Pacheco, Luis F

2014-12-01

Wildlife is often blamed for causing damage to human activities, including agricultural practices and the result may be a conflict between human interests and species conservation. A formal assessment of the magnitude of damage is necessary to adequately conduct management practices and an assessment of the efficiency of different management practices is necessary to enable managers to mitigate the conflict with rural people. This study was carried out to evaluate the effectiveness of agricultural management practices and controlled hunting in reducing damage to subsistence annual crops at the Cotapata National Park and Natural Area of Integrated Management. The design included seven fields with modified agricultural practices, four fields subjected to control hunting, and five fields held as controls. We registered cultivar type, density, frequency of visiting species to the field, crops lost to wildlife, species responsible for damage, and crop biomass. Most frequent species in the fields were Dasyprocta punctata and Dasypus novemcinctus. Hunted plots were visited 1.6 times more frequently than agriculturally managed plots. Crop lost to wildlife averaged 7.28% at agriculturally managed plots, 4.59% in plots subjected to hunting, and 27.61% in control plots. Species mainly responsible for damage were Pecari tajacu, D. punctata, and Sapajus apella. We concluded that both management strategies were effective to reduce damage by >50% as compared to unmanaged crop plots.

Global Estimates of Trace Gas Fluxes Affected by Land Use Change and Irrigation of Major Crops

NASA Astrophysics Data System (ADS)

Ojima, D. S.; del Grosso, S.; Parton, W. J.; Keough, C.

2005-12-01

Cropland conversions have altered many fertile regions of the earth and have modified the biogeochemical and hydrological cycling in these regions. These croplands are significant sources of N trace gas emissions however, the extent of changing trace gas emission due to land management changes and irrigation need further analysis. We use the DAYCENT biogeochemical model which is a daily time step version of the CENTURY model. DAYCENT simulates fluxes of N2O between croplands and the atmosphere for major crop types, and allows for a dynamic representation of GHG fluxes that accounts for environmental conditions, soil characteristics, climate, specific crop qualities, and fertilizer and irrigation management practices. DAYCENT is applied to all world cropland regions. Global datasets of weather, soils, native vegetation and cropping fractions were mapped to an approximate 2° x 2° resolution. Non-spatial data (such as planting date and fertilizer application rates) were assigned as point values for each region (i.e. country), and were assumed to be similar within crop types across the region. Three major crops were simulated (corn, wheat and soybeans) under both irrigated and non-irrigated conditions. Results indicate that N2O emission for maize and soy bean increase between 3 to 10%, where as wheat emission decline by about 1% when irrigated systems are compared to non-irrigated systems.

Functional Roles of microRNAs in Agronomically Important Plants—Potential as Targets for Crop Improvement and Protection

PubMed Central

Djami-Tchatchou, Arnaud T.; Sanan-Mishra, Neeti; Ntushelo, Khayalethu; Dubery, Ian A.

2017-01-01

MicroRNAs (miRNAs) are a class of small non-coding RNAs that have recently emerged as important regulators of gene expression, mainly through cleavage and/or translation inhibition of the target mRNAs during or after transcription. miRNAs play important roles by regulating a multitude of biological processes in plants which include maintenance of genome integrity, development, metabolism, and adaptive responses toward environmental stresses. The increasing population of the world and their food demands requires focused efforts for the improvement of crop plants to ensure sustainable food production. Manipulation of mRNA transcript abundance via miRNA control provides a unique strategy for modulating differential plant gene expression and miRNAs are thus emerging as the next generation targets for genetic engineering for improvement of the agronomic properties of crops. However, a deeper understanding of its potential and the mechanisms involved will facilitate the design of suitable strategies to obtain the desirable traits with minimum trade-offs in the modified crops. In this regard, this review highlights the diverse roles of conserved and newly identified miRNAs in various food and industrial crops and recent advances made in the uses of miRNAs to improve plants of agronomically importance so as to significantly enhance crop yields and increase tolerance to various environmental stress agents of biotic—or abiotic origin. PMID:28382044

Availability and utility of crop composition data.

PubMed

Kitta, Kazumi

2013-09-04

The safety assessment of genetically modified (GM) crops is mandatory in many countries. Although the most important factor to take into account in these safety assessments is the primary effects of artificially introduced transgene-derived traits, possible unintended effects attributed to the insertion of transgenes must be carefully examined in parallel. However, foods are complex mixtures of compounds characterized by wide variations in composition and nutritional values. Food components are significantly affected by various factors such as cultivars and the cultivation environment including storage conditions after harvest, and it can thus be very difficult to detect potential adverse effects caused by the introduction of a transgene. A comparative approach focusing on the identification of differences between GM foods and their conventional counterparts has been performed to reveal potential safety issues and is considered the most appropriate strategy for the safety assessment of GM foods. This concept is widely shared by authorities in many countries. For the efficient safety assessment of GM crops, an easily accessible and wide-ranging compilation of crop composition data is required for use by researchers and regulatory agencies. Thus, we developed an Internet-accessible food composition database comprising key nutrients, antinutrients, endogenous toxicants, and physiologically active substances of staple crops such as rice and soybeans. The International Life Sciences Institute has also been addressing the same matter and has provided the public a crop composition database of soybeans, maize, and cotton.

What Risk Assessments of Genetically Modified Organisms Can Learn from Institutional Analyses of Public Health Risks

PubMed Central

Rajan, S. Ravi; Letourneau, Deborah K.

2012-01-01

The risks of genetically modified organisms (GMOs) are evaluated traditionally by combining hazard identification and exposure estimates to provide decision support for regulatory agencies. We question the utility of the classical risk paradigm and discuss its evolution in GMO risk assessment. First, we consider the problem of uncertainty, by comparing risk assessment for environmental toxins in the public health domain with genetically modified organisms in the environment; we use the specific comparison of an insecticide to a transgenic, insecticidal food crop. Next, we examine normal accident theory (NAT) as a heuristic to consider runaway effects of GMOs, such as negative community level consequences of gene flow from transgenic, insecticidal crops. These examples illustrate how risk assessments are made more complex and contentious by both their inherent uncertainty and the inevitability of failure beyond expectation in complex systems. We emphasize the value of conducting decision-support research, embracing uncertainty, increasing transparency, and building interdisciplinary institutions that can address the complex interactions between ecosystems and society. In particular, we argue against black boxing risk analysis, and for a program to educate policy makers about uncertainty and complexity, so that eventually, decision making is not the burden that falls upon scientists but is assumed by the public at large. PMID:23193357

What risk assessments of genetically modified organisms can learn from institutional analyses of public health risks.

PubMed

Rajan, S Ravi; Letourneau, Deborah K

2012-01-01

The risks of genetically modified organisms (GMOs) are evaluated traditionally by combining hazard identification and exposure estimates to provide decision support for regulatory agencies. We question the utility of the classical risk paradigm and discuss its evolution in GMO risk assessment. First, we consider the problem of uncertainty, by comparing risk assessment for environmental toxins in the public health domain with genetically modified organisms in the environment; we use the specific comparison of an insecticide to a transgenic, insecticidal food crop. Next, we examine normal accident theory (NAT) as a heuristic to consider runaway effects of GMOs, such as negative community level consequences of gene flow from transgenic, insecticidal crops. These examples illustrate how risk assessments are made more complex and contentious by both their inherent uncertainty and the inevitability of failure beyond expectation in complex systems. We emphasize the value of conducting decision-support research, embracing uncertainty, increasing transparency, and building interdisciplinary institutions that can address the complex interactions between ecosystems and society. In particular, we argue against black boxing risk analysis, and for a program to educate policy makers about uncertainty and complexity, so that eventually, decision making is not the burden that falls upon scientists but is assumed by the public at large.

Attitudes, perceptions, and trust. Insights from a consumer survey regarding genetically modified banana in Uganda.

PubMed

Kikulwe, Enoch M; Wesseler, Justus; Falck-Zepeda, Jose

2011-10-01

Genetically modified (GM) crops and food are still controversial. This paper analyzes consumers' perceptions and institutional awareness and trust toward GM banana regulation in Uganda. Results are based on a study conducted among 421 banana-consuming households between July and August 2007. Results show a high willingness to purchase GM banana among consumers. An explanatory factor analysis is conducted to identify the perceptions toward genetic modification. The identified factors are used in a cluster analysis that grouped consumers into segments of GM skepticism, government trust, health safety concern, and food and environmental safety concern. Socioeconomic characteristics differed significantly across segments. Consumer characteristics and perception factors influence consumers' willingness to purchase GM banana. The institutional awareness and trust varied significantly across segments as well. The findings would be essential to policy makers when designing risk-communication strategies targeting different consumer segments to ensure proper discussion and addressing potential concerns about GM technology. Copyright © 2011 Elsevier Ltd. All rights reserved.

Equivalence testing using existing reference data: An example with genetically modified and conventional crops in animal feeding studies.

PubMed

van der Voet, Hilko; Goedhart, Paul W; Schmidt, Kerstin

2017-11-01

An equivalence testing method is described to assess the safety of regulated products using relevant data obtained in historical studies with assumedly safe reference products. The method is illustrated using data from a series of animal feeding studies with genetically modified and reference maize varieties. Several criteria for quantifying equivalence are discussed, and study-corrected distribution-wise equivalence is selected as being appropriate for the example case study. An equivalence test is proposed based on a high probability of declaring equivalence in a simplified situation, where there is no between-group variation, where the historical and current studies have the same residual variance, and where the current study is assumed to have a sample size as set by a regulator. The method makes use of generalized fiducial inference methods to integrate uncertainties from both the historical and the current data. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

Developing trap cropping systems for effective organic management of key insect pests of cucurbit crops (IPM)

USDA-ARS?s Scientific Manuscript database

Trap cropping is a behaviorally-based pest management approach that functions by planting highly attractive plants next to a higher value crop so as to attract the pest to the trap crop plants, thus preventing or making less likely the arrival of the pest to the main crop (= cash crop). In 2012, a s...

Estimating rice yield related traits and quantitative trait loci analysis under different nitrogen treatments using a simple tower-based field phenotyping system with modified single-lens reflex cameras

NASA Astrophysics Data System (ADS)

Naito, Hiroki; Ogawa, Satoshi; Valencia, Milton Orlando; Mohri, Hiroki; Urano, Yutaka; Hosoi, Fumiki; Shimizu, Yo; Chavez, Alba Lucia; Ishitani, Manabu; Selvaraj, Michael Gomez; Omasa, Kenji

2017-03-01

Application of field based high-throughput phenotyping (FB-HTP) methods for monitoring plant performance in real field conditions has a high potential to accelerate the breeding process. In this paper, we discuss the use of a simple tower based remote sensing platform using modified single-lens reflex cameras for phenotyping yield traits in rice under different nitrogen (N) treatments over three years. This tower based phenotyping platform has the advantages of simplicity, ease and stability in terms of introduction, maintenance and continual operation under field conditions. Out of six phenological stages of rice analyzed, the flowering stage was the most useful in the estimation of yield performance under field conditions. We found a high correlation between several vegetation indices (simple ratio (SR), normalized difference vegetation index (NDVI), transformed vegetation index (TVI), corrected transformed vegetation index (CTVI), soil-adjusted vegetation index (SAVI) and modified soil-adjusted vegetation index (MSAVI)) and multiple yield traits (panicle number, grain weight and shoot biomass) across a three trials. Among all of the indices studied, SR exhibited the best performance in regards to the estimation of grain weight (R2 = 0.80). Under our tower-based field phenotyping system (TBFPS), we identified quantitative trait loci (QTL) for yield related traits using a mapping population of chromosome segment substitution lines (CSSLs) and a single nucleotide polymorphism data set. Our findings suggest the TBFPS can be useful for the estimation of yield performance during early crop development. This can be a major opportunity for rice breeders whom desire high throughput phenotypic selection for yield performance traits.

Readiness of adolescents to use genetically modified organisms according to their knowledge and emotional attitude towards GMOs.

PubMed

Lachowski, Stanisław; Jurkiewicz, Anna; Choina, Piotr; Florek-Łuszczki, Magdalena; Buczaj, Agnieszka; Goździewska, Małgorzata

2017-06-07

Agriculture based on genetically modified organisms plays an increasingly important role in feeding the world population, which is evidenced by a considerable growth in the size of land under genetically modified crops (GM). Uncertainty and controversy around GM products are mainly due to the lack of accurate and reliable information, and lack of knowledge concerning the essence of genetic modifications, and the effect of GM food on the human organism, and consequently, a negative emotional attitude towards what is unknown. The objective of the presented study was to discover to what extent knowledge and the emotional attitude of adolescents towards genetically modified organisms is related with acceptance of growing genetically modified plants or breeding GM animals on own farm or allotment garden, and the purchase and consumption of GM food, as well as the use of GMOs in medicine. The study was conducted by the method of a diagnostic survey using a questionnaire designed by the author, which covered a group of 500 adolescents completing secondary school on the level of maturity examination. The collected material was subjected to statistical analysis. Research hypotheses were verified using chi-square test (χ ² ), t-Student test, and stepwise regression analysis. Stepwise regression analysis showed that the readiness of adolescents to use genetically modified organisms as food or for the production of pharmaceuticals, the production of GM plants or animals on own farm, depends on an emotional-evaluative attitude towards GMOs, and the level of knowledge concerning the essence of genetic modifications.

Effects of agricultural practices of three crops on the soil communities under Mediterranean conditions: field evaluation.

NASA Astrophysics Data System (ADS)

Leitão, Sara; José Cerejeira, Maria; Abreu, Manuela; Sousa, José Paulo

2014-05-01

Sustainable agricultural production relies on soil communities as the main actors in key soil processes necessary to maintain sustainable soil functioning. Soil biodiversity influences soil physical and chemical characteristics and thus the sustainability of crop and agro-ecosystems functioning. Agricultural practices (e.g.: soil tillage, pesticides and fertilizer applications, irrigation) may affects negatively or positively soil biodiversity and abundances by modifying the relationships between organisms in the soil ecosystem. The present study aimed to study the influence of agricultural practices of three crops (potato, onion and maize) under Mediterranean climate conditions on soil macro- and mesofauna during their entire crop cycles. Effects on soil communities were assessed at a higher tier of environmental risk assessment comprising field testing of indigenous edaphic communities in a selected study-site located in a major agriculture region of Central Portugal, Ribatejo e Oeste, neighbouring protected wetlands. A reference site near the agricultural field site was selected as a Control site to compare the terrestrial communities' composition and variation along the crop cycle. The field soil and Control site soil are sandy loam soils. Crops irrigation was performed by center-pivot (automated sprinkler that rotates in a half a circle area) and by sprinklers. Soil macro- and mesofauna were collected at both sites (field and Control) using two methodologies through pitfall trapping and soil sampling. The community of soil macro- and mesofauna of the three crops field varied versus control site along the crops cycles. Main differences were due to arachnids, coleopterans, ants and adult Diptera presence and abundance. The feeding activity of soil fauna between control site and crop areas varied only for potato and onion crops vs. control site but not among crops. Concentration of pesticides residues in soil did not cause apparent negative effects on the soil communities. Significant differences of soil communities from potato and onion crops with the one from control site were observed at the beginning and during the crop cycle, but similarities were observed at the last sampling date after harvesting. The same was observed for the maize crop, indicating that soil communities recovered from the agricultural disturbances associated with crops management. An integrated approach such as the one adopted in present study, taking into consideration soil community's abundances, feeding activity and time variations along entire crop cycles of several crops under Mediterranean conditions, as well as soil exposure to pesticides residues, may contribute to decision making towards a sustainability of crop areas, including pesticide use and management practices.

Network-assisted crop systems genetics: network inference and integrative analysis.

PubMed

Lee, Tak; Kim, Hyojin; Lee, Insuk

2015-04-01

Although next-generation sequencing (NGS) technology has enabled the decoding of many crop species genomes, most of the underlying genetic components for economically important crop traits remain to be determined. Network approaches have proven useful for the study of the reference plant, Arabidopsis thaliana, and the success of network-based crop genetics will also require the availability of a genome-scale functional networks for crop species. In this review, we discuss how to construct functional networks and elucidate the holistic view of a crop system. The crop gene network then can be used for gene prioritization and the analysis of resequencing-based genome-wide association study (GWAS) data, the amount of which will rapidly grow in the field of crop science in the coming years. Copyright © 2015 Elsevier Ltd. All rights reserved.

Oilseed crops as renewable sources of industrial chemicals

DOE Office of Scientific and Technical Information (OSTI.GOV)

McKeon, T.A.; Lin, Jiann-Tsyh; Goodrich-Tanrikulu, M.

1995-12-01

The presence of specific functional groups on a fatty acid confers value for industrial uses. The plant kingdom contains numerous examples of plants that produce seed oils containing fatty acids with epoxy groups, hydroxyl groups, triple bonds or with unusual double bond positions. These fatty acids can be used directly or are readily modified for use in specialty lubricants, plastics and coatings. Many of these plants are not cultivated in the U.S. due to unsuitable climate or growth habit. Such plants provide a source of genes coding for enzymes that will carry out the desired fatty acid modification. Genetic technologymore » allows the transfer of these genes into domestically grown crops such as rapeseed or soybean, with consequent production of the desired fatty acid in the seed oil. One biotechnology company has commercialized a transgenic oilseed crop with an altered fatty acid composition. This talk will review current and projected plans for developing oilseed crops to serve as renewable resources that meet current industrial needs or provide chemical feedstocks for new uses.« less

Sampling Strategies for Evaluating the Rate of Adventitious Transgene Presence in Non-Genetically Modified Crop Fields.

PubMed

Makowski, David; Bancal, Rémi; Bensadoun, Arnaud; Monod, Hervé; Messéan, Antoine

2017-09-01

According to E.U. regulations, the maximum allowable rate of adventitious transgene presence in non-genetically modified (GM) crops is 0.9%. We compared four sampling methods for the detection of transgenic material in agricultural non-GM maize fields: random sampling, stratified sampling, random sampling + ratio reweighting, random sampling + regression reweighting. Random sampling involves simply sampling maize grains from different locations selected at random from the field concerned. The stratified and reweighting sampling methods make use of an auxiliary variable corresponding to the output of a gene-flow model (a zero-inflated Poisson model) simulating cross-pollination as a function of wind speed, wind direction, and distance to the closest GM maize field. With the stratified sampling method, an auxiliary variable is used to define several strata with contrasting transgene presence rates, and grains are then sampled at random from each stratum. With the two methods involving reweighting, grains are first sampled at random from various locations within the field, and the observations are then reweighted according to the auxiliary variable. Data collected from three maize fields were used to compare the four sampling methods, and the results were used to determine the extent to which transgene presence rate estimation was improved by the use of stratified and reweighting sampling methods. We found that transgene rate estimates were more accurate and that substantially smaller samples could be used with sampling strategies based on an auxiliary variable derived from a gene-flow model. © 2017 Society for Risk Analysis.

Field trial of insect-resistant and herbicide-tolerant genetically modified cotton (Gossypium hirsutum L.) for environmental risk assessment in Japan.

PubMed

Asanuma, Yoko; Gondo, Takahiro; Ishigaki, Genki; Inoue, Koichi; Zaita, Norihiro; Muguerza, Melody; Akashi, Ryo

2017-04-03

Japan imports cottonseed mainly from Australia and the USA where more than 96% of all cotton varieties grown are genetically modified (GM). GM crops undergo an environmental risk assessment (ERA) under the Law Concerning the Conservation and Sustainable Use of Biological Diversity before import into Japan. Potential adverse effects on biodiversity are comprehensively assessed based on competitiveness, production of harmful substances and outcrossing ability. Even though imported cottonseed is intended for food and feed uses and not for cultivation, the potential risks from seed spillage during transport must be evaluated. In most cases, the ERA requires data collected from in-country field trials to demonstrate how the GM crop behaves in Japan's environment. Confined field trials in Japan were conducted for the ERA of Lepidoptera-resistant and glufosinate-tolerant GM cotton (Gossypium hirsutum L.) lines GHB119 and T304-40. These lines were compared with conventional varieties for growth habit, morphological characteristics, seed dormancy, and allelopathic activity associated with competitiveness and production of harmful substances. Outcrossing ability was not a concern due to the absence of sexually compatible wild relatives in Japan. Although slight statistical differences were observed between the GM line and its conventional comparator for some morphological characteristics, transgenes or transformation were not considered to be responsible for these differences. The trial demonstrated that competitiveness and production of harmful substances by these GM cotton lines were equivalent to conventional cotton varieties that have a long history of safe use, and no potential adverse effects to biosafety in Japan were observed.

Field trial of insect-resistant and herbicide-tolerant genetically modified cotton (Gossypium hirsutum L.) for environmental risk assessment in Japan

PubMed Central

Asanuma, Yoko; Gondo, Takahiro; Ishigaki, Genki; Inoue, Koichi; Zaita, Norihiro; Muguerza, Melody; Akashi, Ryo

2017-01-01

ABSTRACT Japan imports cottonseed mainly from Australia and the USA where more than 96% of all cotton varieties grown are genetically modified (GM). GM crops undergo an environmental risk assessment (ERA) under the Law Concerning the Conservation and Sustainable Use of Biological Diversity before import into Japan. Potential adverse effects on biodiversity are comprehensively assessed based on competitiveness, production of harmful substances and outcrossing ability. Even though imported cottonseed is intended for food and feed uses and not for cultivation, the potential risks from seed spillage during transport must be evaluated. In most cases, the ERA requires data collected from in-country field trials to demonstrate how the GM crop behaves in Japan's environment. Confined field trials in Japan were conducted for the ERA of Lepidoptera-resistant and glufosinate-tolerant GM cotton (Gossypium hirsutum L.) lines GHB119 and T304-40. These lines were compared with conventional varieties for growth habit, morphological characteristics, seed dormancy, and allelopathic activity associated with competitiveness and production of harmful substances. Outcrossing ability was not a concern due to the absence of sexually compatible wild relatives in Japan. Although slight statistical differences were observed between the GM line and its conventional comparator for some morphological characteristics, transgenes or transformation were not considered to be responsible for these differences. The trial demonstrated that competitiveness and production of harmful substances by these GM cotton lines were equivalent to conventional cotton varieties that have a long history of safe use, and no potential adverse effects to biosafety in Japan were observed. PMID:28510512

Genes in food--why the furore?

PubMed

Dixon, Bernard

2003-04-01

Although unprecedented and perhaps unique in its irrationality, the recent furore over genetically modified (GM) food holds extremely important lessons for scientists. Some sections of the media undoubtedly bear a heavy responsibility for giving the expression 'GM' threatening connotations that are quite unwarranted. However, influential contributions to the hysteria have come from a surprising range of other sources, including some scientists. The research community has failed in its responsibility to society in three ways. Firstly, plant scientists did not appreciate that certain techniques (such as the use of antibiotic resistance genes as markers during plant transformation) would inevitably provoke public consternation. As a result, they took no steps to address such concerns. Secondly, researchers overlooked, minimized or in some cases simply dismissed the significance of public fears that they were 'interfering with Nature' or 'playing God'. Thirdly, plant breeders apparently saw no need to take pro-active measures with regard to the media and public in placing potential environmental and nutritional benefits of GM crops on the agenda in a positive fashion. Partly because of this failure, GM food is now firmly established in the public mind as wholly objectionable. One measure of how far we have travelled down that road is that it hardly matters any more whether objections are based on alleged environmental risks of cultivating GM crops or alleged toxicological hazards of eating them. 'Genetically modified organism', like 'radioactivity', has become an odious, generic shibboleth. Given that millions of people throughout the world are already benefiting from pharmaceuticals made by GM organisms, this is bizarre.

Cry1A(b)16 toxin from Bacillus thuringiensis: Theoretical refinement of three-dimensional structure and prediction of peptides as molecular markers for detection of genetically modified organisms.

PubMed

Plácido, Alexandra; Coelho, Andreia; Abreu Nascimento, Lucas; Gomes Vasconcelos, Andreanne; Fátima Barroso, Maria; Ramos-Jesus, Joilson; Costa, Vladimir; das Chagas Alves Lima, Francisco; Delerue-Matos, Cristina; Martins Ramos, Ricardo; Marani, Mariela M; Roberto de Souza de Almeida Leite, José

2017-07-01

Transgenic maize produced by the insertion of the Cry transgene into its genome became the second most cultivated crop worldwide. Cry gene from Bacillus thuringiensis kurstaki expresses protein derivatives of crystalline endotoxins which confer insect resistance onto the maize crop. Mandatory labeling of processed food containing or made by genetically modified organisms is in force in many countries, so, it is very urgent to develop fast and practical methods for GMO identification, for example, biosensors. In the absence of an available empirical structure of Cry1A(b)16 protein, a theoretical model was effectively generated, in this work, by homology modeling and molecular dynamics simulations based on two available homologous protein structures. Molecular dynamics simulations were carried out to refine the selected model, and an analysis of its global structure was performed. The refined models of Cry1A(b)16 showed a standard fold and structural characteristics similar to those seen in Bacillus thuringiensis Cry1A(a) insecticidal toxin and Bacillus thuringiensis serovar kurstaki Cry1A(c) toxin. After in silico analysis of Cry1A(b)16, two immunoreactive candidate peptides were selected and specific polyclonal antibodies were produced resulting in antibody-peptide interaction. Biosensing devices are expected to be developed for detection of the Cry1A(b) protein as a marker of transgenic maize in food. Proteins 2017; 85:1248-1257. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Distillation irrigation: a low-energy process for coupling water purification and drip irrigation

USGS Publications Warehouse

Constantz, J.

1989-01-01

A method is proposed for combining solar distillation and drip irrigation to simultaneously desalinize water and apply this water to row crops. In this paper, the basic method is illustrated by a simple device constructed primarily of sheets of plastic, which uses solar energy to distill impaired water and apply the distillate to a widely spaced row crop. To predict the performance of the proposed device, an empirical equation for distillate production, dp, is developed from reported solar still production rates, and a modified Jensen-Haise equation is used to calculate the potential evapotranspiration, et, for a row crop. Monthly values for et and dp are calculated by using a generalized row crop at five locations in the Western United States. Calculated et values range from 1 to 22 cm month-1 and calculated dp values range from 2 to 11 cm month-1, depending on the location, the month, and the crop average. When the sum of dp plus precipitation, dp + P, is compared to et for the case of 50% distillation irrigation system coverage, the results indicate that the crop's et is matched by dp + P, at the cooler locations only. However, when the system coverage is increased to 66%, the crop's et is matched by dp + P even at the hottest location. Potential advantages of distillation irrigation include the ability: (a) to convert impaired water resources to water containing no salts or sediments; and (b) to efficiently and automatically irrigate crops at a rate that is controlled primarily by radiation intensities. The anticipated disadvantages of distillation irrigation include: (a) the high costs of a system, due to the large amounts of sheeting required, the short lifetime of the sheeting, and the physically cumbersome nature of a system; (b) the need for a widely spaced crop to reduce shading of the system by the crop; and (c) the production of a concentrated brine or precipitate, requiring proper off-site disposal. ?? 1989.

Effects of crop rotation on properties of a Vietnam clay soil under rice-based cropping systems in small-scale farmers' fields

USDA-ARS?s Scientific Manuscript database

In tropical deltas, intensive monocultures with three rice crops per year have been the standard for decades. In recent years, though, rice-based rotations with one or more upland crops per year are being adopted by several farmers. Their trends of increasing grain yields raise the question whether ...

Rice crop risk map in Babahoyo canton (Ecuador)

NASA Astrophysics Data System (ADS)

Valverde Arias, Omar; Tarquis, Ana; Garrido, Alberto

2016-04-01

It is widely known that extreme climatic phenomena occur with more intensity and frequency. This fact has put more pressure over farming, making agricultural and livestock production riskier. In order to reduce hazards and economic loses that could jeopardize farmer's incomes and even its business continuity, it is very important to implement agriculture risk management plans by governments and institutions. One of the main strategies is transfer risk by agriculture insurance. Agriculture insurance based in indexes has a significant growth in the last decade. And consist in a comparison between measured index values with a defined threshold that triggers damage losses. However, based index insurance could not be based on an isolated measurement. It is necessary to be integrated in a complete monitoring system that uses many sources of information and tools. For example, index influence areas, crop production risk maps, crop yields, claim statistics, and so on. Crop production risk is related with yield variation of crops and livestock, due to weather, pests, diseases, and other factors that affect both the quantity and quality of commodities produced. This is the risk which farmers invest more time managing, and it is completely under their control. The aim of this study is generate a crop risk map of rice that can provide risk manager important information about the status of crop facing production risks. Then, based on this information, it will be possible to make best decisions to deal with production risk. The rice crop risk map was generated qualifying a 1:25000 scale soil and climatic map of Babahoyo canton, which is located in coast region of Ecuador, where rice is one of the main crops. The methodology to obtain crop risk map starts by establishing rice crop requirements and indentifying the risks associated with this crop. A second step is to evaluate soil and climatic conditions of the study area related to optimal crop requirements. Based on it, we can determinate which level of rice crop requirement is met. Finally we have established rice crop zones classified as: suitable, moderate suitable, marginal suitable and unsuitable. Several methods have been used to estimate the degree with which crop requirements are satisfied, pondering weights of limiting factors to adequate crop conditions. Better conditions for cropping in a specific area imply less risk in production. In this case, crop will be less affected by pests and disease, although this closely depends on crop management. Farmers have to invest less money to produce and could increase their benefit. Results are showed and discussed with the aim to study the efficiency and potential of this risk map.

Using enzymes and microorganisms to modify the mycotoxin deoxynivalenol

USDA-ARS?s Scientific Manuscript database

Deoxynivalenol (DON) is a trichothecene mycotoxin produced by the fungus Fusarium graminearum that contaminates staple crops such as wheat, barley, and maize when they are infected with this fungus. New strategies are needed to mitigate DON. We screened for microbes that could grow in the presence o...

Impact of agroforestry plantings for bioenergy production on soil organic carbon

USDA-ARS?s Scientific Manuscript database

Tree windbreaks are an attractive multiple-benefit land use through their ability to mitigate climate change by modifying the local microclimate to improve crop growth and by sequestering carbon in the soil and tree biomass. Recently, such agroforestry practices are also being considered for their b...

Between Development and Environment: Uncertainties of Agrofuels

ERIC Educational Resources Information Center

Leon Sicard, Tomas Enrique

2009-01-01

This article examines the dominant agricultural model in Colombia of which the emergence of biofuels is an inevitable and major consequence. Some uncertainties and complexities of the introduction of biofuels and the use of genetically modified crops are analyzed, including a general reflection on the possibilities of producing biofuels on the…

E-media and crop nutrition monitoring

Treesearch

Diana C. Coburn; Ral E. Moreno

2007-01-01

Modifying media through the addition of slow-release fertilizers and other amendments is a beneficial tool in optimizing seedling performance. At our container reforestation nursery in southwest Washington, we have been enhancing our media through the incorporation of slowrelease fertilizers and other amendments in our culturing of native conifers. The concept behind...

The Unified Plant Growth Model (UPGM): software framework overview and model application

USDA-ARS?s Scientific Manuscript database

Since the Environmental Policy Integrated Climate (EPIC) model was developed in 1989, the EPIC plant growth component has been incorporated into other erosion and crop management models (e.g., WEPS, WEPP, SWAT, ALMANAC, and APEX) and modified to meet model developer research objectives. This has re...

Field-testing a portable wind tunnel for fine dust emissions

USDA-ARS?s Scientific Manuscript database

A protable wind tunnel has been developed to allow erodibility and dust emissions testing of soil surfaces with the premise that dust concentration and properties are highly correlated with surface soil properties, as modified by crop management system. In this study we report on the field-testing ...

THE IMPACTS OF CLIMATE CHANGE ON RICE YIELD: A COMPARISON OF FOUR MODEL PERFORMANCES

EPA Science Inventory

Increasing concentrations of carbon dioxide (CO2) and other greenhouse gases are expected to modify temperature and rainfall the next 50-100 years. echanisms and hypotheses of plant response to these changes could be incorporated in models predicting crop yield estimates to bette...

Food Security: Selected Global and U.S. Resources

ERIC Educational Resources Information Center

Kocher, Megan

2015-01-01

Food security is researched and dealt with on local, regional, national, and global levels with solutions ranging from local farmers' market initiatives to increasing crop yields through genetically modified plants to streamlining global supply chains. Because of its broad, interdisciplinary nature, it is necessary to narrow the focus of this…

LONG-DISTANCE GM POLLEN MOVEMENT OF CREEPING BENTGRASS USING MODELED WIND TRAJECTORY ANALYSIS

EPA Science Inventory

The importance of understanding the role of atmospheric conditions in pollen dispersal has grown in recent years with increased field-testing of genetically modified (GM) crop plants. An atmospheric model was used to characterize wind trajectories at 10 m and 100 m above GM polle...

Response of Pennsylvania native plant species, corn and soybean to tank mixes of dicamba and glyphosate

EPA Science Inventory

Crops such as soybean are being genetically modified to be tolerant to multiple herbicides, such as dicamba and glyphosate, in order to allow treatment with several herbicides to control the development of herbicide resistance in weeds. However, with increased use of multiple-he...

Genetic structure and gene flow among Brazilian populations of Heliothis virescens (F.) (Lepidoptera: Noctuidae)

USDA-ARS?s Scientific Manuscript database

Population genetic studies are essential to the better application of pest management strategies, including the monitoring of the evolution of resistance to insecticides and genetically modified plants. Bt-crops have been instrumental in controlling Heliothis virescens (F.), a pest that has develop...

In search of genetic resources for improvement of seedling vigor under cold temperatures

USDA-ARS?s Scientific Manuscript database

Rice production practices are constantly being modified as a result of the availability of new technologies and the changing economic picture. Farmers are planting rice at least one month earlier than a decade ago. With increasing interest in alternative cropping systems, minimum tillage, and water ...

Yield and water quality for different residue managements of sugarcane in Louisiana

USDA-ARS?s Scientific Manuscript database

The focus of the study was to provide information on implementation of a modified post-harvest crop residue sweeper on sugarcane yield and water quality. Field experiments were established at three different locations in south Louisiana: Paincourtville, Duson and Baton Rouge. In each location, lar...

Modifying lignin composition and content of sorghum biomass for improved bioenergy conversion

USDA-ARS?s Scientific Manuscript database

Sorghum (Sorghum bicolor) is an opportune crop for bioenergy due to its high yield potential, and lower nitrogen and water requirements. Transgenic constructs expressing monolignol biosynthetic genes under control of 35S promoter have been developed and used for sorghum transformation to examine the...

Sorption of the herbicide aminocyclopyrachlor by cation modified clay minerals

USDA-ARS?s Scientific Manuscript database

Aminocyclopyrachlor is a newly registered herbicide for the control of broadleaf weeds, grasses, vines and woody species in non-crops, turf, sod farms, and residential areas. At typical soil pH levels, aminocyclopyrachlor is in the anionic form. Anionic pesticides are generally weakly retained by mo...

Natural Products for Weed Management in Organic Farming in the USA

USDA-ARS?s Scientific Manuscript database

The public sentiment toward the use of synthetic herbicides and genetically modified crops has become negative in the developed world. In contrast, the popularity of and demand for organic foods has grown throughout the developed world, which has resulted in the conversion of millions of hectares f...

Glyphosate drift promotes changes in fitness and transgene flow in canola (Brassica napus) and hybrids

EPA Science Inventory

1. With the advent of transgenic crops, genetically modified, herbicide resistant B. napus has become a model system for examining the risks of escape of transgenes from cultivation and for evaluating potential ecological consequences of novel genes in wild species. 2. We exam...

Glyphosate applications,glyphosate resistant corn, and tillage on nitrification rates and distribution of nitrifying microbial communities

USDA-ARS?s Scientific Manuscript database

Conservation tillage practices have combined genetically modified glyphosate resistant corn crops along with applications of the herbicide glyphosate. We tested the null hypothesis that the soil process of nitrification and the distribution of archaeal and bacterial nitrifying communities would not ...

Turning rice meiosis into mitosis

PubMed Central

Mieulet, Delphine; Jolivet, Sylvie; Rivard, Maud; Cromer, Laurence; Vernet, Aurore; Mayonove, Pauline; Pereira, Lucie; Droc, Gaëtan; Courtois, Brigitte; Guiderdoni, Emmanuel; Mercier, Raphael

2016-01-01

Introduction of clonal reproduction through seeds (apomixis) in crops has the potential to revolutionize agriculture by allowing self-propagation of any elite variety, in particular F1 hybrids. In the sexual model plant Arabidopsis thaliana synthetic clonal reproduction through seeds can be artificially implemented by (i) combining three mutations to turn meiosis into mitosis (MiMe) and (ii) crossing the obtained clonal gametes with a line expressing modified CENH3 and whose genome is eliminated in the zygote. Here we show that additional combinations of mutations can turn Arabidopsis meiosis into mitosis and that a combination of three mutations in rice (Oryza sativa) efficiently turns meiosis into mitosis, leading to the production of male and female clonal diploid gametes in this major crop. Successful implementation of the MiMe technology in the phylogenetically distant eudicot Arabidopsis and monocot rice opens doors for its application to any flowering plant and paves the way for introducing apomixis in crop species. PMID:27767093

Cisgenics - A Sustainable Approach for Crop Improvement

PubMed Central

Telem, R.S.; Wani, Shabir. H.; Singh, N.B.; Nandini, R.; Sadhukhan, R.; Bhattacharya, S.; Mandal, N.

2013-01-01

The implication of molecular biology in crop improvement is now more than three decades old. Not surprisingly, technology has moved on, and there are a number of new techniques that may or may not come under the genetically modified (GM) banner and, therefore, GM regulations. In cisgenic technology, cisgenes from crossable plants are used and it is a single procedure of gene introduction whereby the problem of linkage drag of other genes is overcome. The gene used in cisgenic approach is similar compared with classical breeding and cisgenic plant should be treated equally as classically bred plant and differently from transgenic plants. Therefore, it offers a sturdy reference to treat cisgenic plants similarly as classically bred plants, by exemption of cisgenesis from the current GMO legislations. This review covers the implications of cisgenesis towards the sustainable development in the genetic improvement of crops and considers the prospects for the technology. PMID:24396278

[The application of genome editing in identification of plant gene function and crop breeding].

PubMed

Zhou, Xiang-chun; Xing, Yong-zhong

2016-03-01

Plant genome can be modified via current biotechnology with high specificity and excellent efficiency. Zinc finger nucleases (ZFN), transcription activator-like effector nucleases (TALEN) and clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated 9 (Cas9) system are the key engineered nucleases used in the genome editing. Genome editing techniques enable gene targeted mutagenesis, gene knock-out, gene insertion or replacement at the target sites during the endogenous DNA repair process, including non-homologous end joining (NHEJ) and homologous recombination (HR), triggered by the induction of DNA double-strand break (DSB). Genome editing has been successfully applied in the genome modification of diverse plant species, such as Arabidopsis thaliana, Oryza sativa, and Nicotiana tabacum. In this review, we summarize the application of genome editing in identification of plant gene function and crop breeding. Moreover, we also discuss the improving points of genome editing in crop precision genetic improvement for further study.

The impact of Genetically Modified (GM) crops in modern agriculture: A review.

PubMed

Raman, Ruchir

2017-10-02

Genetic modification in plants was first recorded 10,000 years ago in Southwest Asia where humans first bred plants through artificial selection and selective breeding. Since then, advancements in agriculture science and technology have brought about the current GM crop revolution. GM crops are promising to mitigate current and future problems in commercial agriculture, with proven case studies in Indian cotton and Australian canola. However, controversial studies such as the Monarch Butterfly study (1999) and the Séralini affair (2012) along with current problems linked to insect resistance and potential health risks have jeopardised its standing with the public and policymakers, even leading to full and partial bans in certain countries. Nevertheless, the current growth rate of the GM seed market at 9.83-10% CAGR along with promising research avenues in biofortification, precise DNA integration and stress tolerance have forecast it to bring productivity and prosperity to commercial agriculture.

Epistemological depth in a GM crops controversy.

PubMed

Hicks, Daniel J

2015-04-01

This paper examines the scientific controversy over the yields of genetically modified [GM] crops as a case study in epistemologically deep disagreements. Appeals to "the evidence" are inadequate to resolve such disagreements; not because the interlocutors have radically different metaphysical views (as in cases of incommensurability), but instead because they assume rival epistemological frameworks and so have incompatible views about what kinds of research methods and claims count as evidence. Specifically, I show that, in the yield debate, proponents and opponents of GM crops cite two different sets of claims as evidence, which correspond to two rival epistemological frameworks, classical experimental epistemology and Nancy Cartwright's evidence for use. I go on to argue that, even if both sides of the debate accepted Cartwright's view, they might still disagree over what counts as evidence, because evidence for use ties standards of evidence to what is sometimes called the "context of application." Copyright © 2015 Elsevier Ltd. All rights reserved.

Reducing the pollution risk of pesticide using nano networks induced by irradiation and hydrothermal treatment.

PubMed

Sun, Xiao; Liu, Zuojun; Zhang, Guilong; Qiu, Guannan; Zhong, Naiqin; Wu, Lifang; Cai, Dongqing; Wu, Zhengyan

2015-01-01

Traditional pesticides (TP) often do not adhere tightly to crop foliage. They can easily enter the surrounding environment through precipitation and volatilization. This can result in the pollution of the surrounding soil, water, and air. To reduce pesticide pollution, we developed a loss-control pesticide (LCP) by adding attapulgite with a nano networks structure fabricated using high energy electron beam (HEEB) irradiation and hydrothermal treatment to TP. HEEB irradiation effectively dispersed originally aggregated attapulgite through modified thermal, charge, and physical effects. Hydrothermal treatment further enhanced the dispersion of attapulgite to form nano porous networks via thermal and wet expansion effects, which are beneficial for pesticide binding. An LCP has improved retention on crop leaf surfaces. It has a higher adhesion capacity, reduced leaching and volatilization, and extended residual activity compared with the TP formulation. The treatment increases the residual activity of pesticides on crop foliage and decreases environmental pollution.

Root Traits and Phenotyping Strategies for Plant Improvement

PubMed Central

Paez-Garcia, Ana; Motes, Christy M.; Scheible, Wolf-Rüdiger; Chen, Rujin; Blancaflor, Elison B.; Monteros, Maria J.

2015-01-01

Roots are crucial for nutrient and water acquisition and can be targeted to enhance plant productivity under a broad range of growing conditions. A current challenge for plant breeding is the limited ability to phenotype and select for desirable root characteristics due to their underground location. Plant breeding efforts aimed at modifying root traits can result in novel, more stress-tolerant crops and increased yield by enhancing the capacity of the plant for soil exploration and, thus, water and nutrient acquisition. Available approaches for root phenotyping in laboratory, greenhouse and field encompass simple agar plates to labor-intensive root digging (i.e., shovelomics) and soil boring methods, the construction of underground root observation stations and sophisticated computer-assisted root imaging. Here, we summarize root architectural traits relevant to crop productivity, survey root phenotyping strategies and describe their advantages, limitations and practical value for crop and forage breeding programs. PMID:27135332

Root Traits and Phenotyping Strategies for Plant Improvement.

PubMed

Paez-Garcia, Ana; Motes, Christy M; Scheible, Wolf-Rüdiger; Chen, Rujin; Blancaflor, Elison B; Monteros, Maria J

2015-06-15

Roots are crucial for nutrient and water acquisition and can be targeted to enhance plant productivity under a broad range of growing conditions. A current challenge for plant breeding is the limited ability to phenotype and select for desirable root characteristics due to their underground location. Plant breeding efforts aimed at modifying root traits can result in novel, more stress-tolerant crops and increased yield by enhancing the capacity of the plant for soil exploration and, thus, water and nutrient acquisition. Available approaches for root phenotyping in laboratory, greenhouse and field encompass simple agar plates to labor-intensive root digging (i.e., shovelomics) and soil boring methods, the construction of underground root observation stations and sophisticated computer-assisted root imaging. Here, we summarize root architectural traits relevant to crop productivity, survey root phenotyping strategies and describe their advantages, limitations and practical value for crop and forage breeding programs.

Novel multiplex qualitative detection using universal primer-multiplex-PCR combined with pyrosequencing.

PubMed

Shang, Ying; Xu, Wentao; Wang, Yong; Xu, Yuancong; Huang, Kunlun

2017-12-15

This study described a novel multiplex qualitative detection method using pyrosequencing. Based on the principle of the universal primer-multiplex-PCR, only one sequencing primer was employed to realize the detection of the multiple targets. Samples containing three genetically modified (GM) crops in different proportions were used to validate the method. The dNTP dispensing order was designed based on the product sequences. Only 12 rounds (ATCTGATCGACT) of dNTPs addition and, often, as few as three rounds (CAT) under ideal conditions, were required to detect the GM events qualitatively, and sensitivity was as low as 1% of a mixture. However, when considering a mixture, calculating signal values allowed the proportion of each GM to be estimated. Based on these results, we concluded that our novel method not only realized detection but also allowed semi-quantitative detection of individual events. Copyright © 2017. Published by Elsevier Ltd.

JULES-crop: a parametrisation of crops in the Joint UK Land Environment Simulator

NASA Astrophysics Data System (ADS)

Osborne, T.; Gornall, J.; Hooker, J.; Williams, K.; Wiltshire, A.; Betts, R.; Wheeler, T.

2014-10-01

Studies of climate change impacts on the terrestrial biosphere have been completed without recognition of the integrated nature of the biosphere. Improved assessment of the impacts of climate change on food and water security requires the development and use of models not only representing each component but also their interactions. To meet this requirement the Joint UK Land Environment Simulator (JULES) land surface model has been modified to include a generic parametrisation of annual crops. The new model, JULES-crop, is described and evaluation at global and site levels for the four globally important crops; wheat, soy bean, maize and rice is presented. JULES-crop demonstrates skill in simulating the inter-annual variations of yield for maize and soy bean at the global level, and for wheat for major spring wheat producing countries. The impact of the new parametrisation, compared to the standard configuration, on the simulation of surface heat fluxes is largely an alteration of the partitioning between latent and sensible heat fluxes during the later part of the growing season. Further evaluation at the site level shows the model captures the seasonality of leaf area index and canopy height better than in standard JULES. However, this does not lead to an improvement in the simulation of sensible and latent heat fluxes. The performance of JULES-crop from both an earth system and crop yield model perspective is encouraging however, more effort is needed to develop the parameterisation of the model for specific applications. Key future model developments identified include the specification of the yield gap to enable better representation of the spatial variability in yield.

Allelopathic cover crop prior to seeding is more important than subsequent grazing/mowing in grassland establishment

USGS Publications Warehouse

Milchunas, Daniel G.; Vandever, Mark W.; Ball, Leonard O.; Hyberg, Skip

2011-01-01

The effects of grazing, mowing, and type of cover crop were evaluated in a previous winter wheat–fallow cropland seeded to grassland under the Conservation Reserve Program in eastern Colorado. Prior to seeding, the fallow strips were planted to forage sorghum or wheat in alternating strips (cover crops), with no grazing, moderate to heavy grazing, and mowing (grazing treatments) superimposed 4 yr after planting and studied for 3 yr. Plots previously in wheat had more annual and exotic species than sorghum plots. Concomitantly, there were much greater abundances of perennial native grass and all native species in sorghum than wheat cropped areas. The competitive advantage gained by seeded species in sorghum plots resulted in large increases in rhizomatous western wheatgrass. Sorghum is known to be allelopathic and is used in crop agriculture rotations to suppress weeds and increase crop yields, consistent with the responses of weed and desired native species in this study. Grazing treatment had relatively minor effects on basal and canopy cover composition of annual or exotic species versus perennial native grass or native species. Although grazing treatment never was a significant main effect, it occasionally modified cover crop or year effects. Opportunistic grazing reduced exotic cheatgrass by year 3 but also decreased the native palatable western wheatgrass. Mowing was a less effective weed control practice than grazing. Vegetative basal cover and aboveground primary production varied primarily with year. Common management practices for revegetation/restoration currently use herbicides and mowing as weed control practices and restrict grazing in all stages of development. Results suggest that allelopathic cover crop selection and opportunistic grazing can be effective alternative grass establishment and weed control practices. Susceptibility, resistance, and interactions of weed and seeded species to allelopathic cover species/cultivars may be a fruitful area of research.

Transgenic crops get a test in the wild

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cherfas, J.

1991-02-22

A novel British research program called PROSAMO - Planned Release of Selected and Modified Organisms - has just produced its first batch of results on the ecological behavior of a genetically manipulated variety of oil seed rape (known to Americans as canola). As expected, the preliminary data indicate that these plants do not outgrow their competitors in the wild, nor is there any evidence that they pass on their foreign genes to other species. PROSAMO is moving on to test other crops with other foreign genes. If these results are as reassuring, scientists around the world will have solid evidencemore » with which to soothe fears.« less