Phylogeographic structure of the Common hamster (Cricetus cricetus L.): Late Pleistocene connections between Caucasus and Western European populations

PubMed Central

Meschersky, Ilya G.; Bogomolov, Pavel L.; Sayan, Alexandra S.; Poplavskaya, Natalia S.; Surov, Alexey V.

2017-01-01

The Common hamster (Cricetus cricetus) is one of the most endangered mammals in Western and Central Europe. Its genetic diversity in Russia and Kazakhstan was investigated for the first time. The analysis of sequences of an mtDNA control region and cytochrome b gene revealed at least three phylogenetic lineages. Most of the species range (approximately 3 million km2), including central Russia, Crimea, the Ural region, and northern Kazakhstan), is inhabited by a single, well-supported phylogroup, E0. Phylogroup E1, previously reported from southeastern Poland and western Ukraine, was first described from Russia (Bryansk Province). E0 and E1 are sister lineages but both are monophyletic and separated by considerable genetic distance. Hamsters inhabiting Ciscaucasia represent a separate, distant phylogenetic lineage, named “Caucasus”. It is sister to the North phylogroup from Western Europe and the contemporary phylogeography for this species is discussed considering new data. These data enabled us to develop a new hypothesis to propose that in the Late Pleistocene, the continuous range of the Common hamster in the northern Mediterranean extended from the central and southern parts of modern France to the Caucasus; however, its distribution was subsequently interrupted, likely because of climate change. PMID:29095950

[New species and sympatric relations of the chigger mite species group Talmiensis (Trombiculidae, Neotrombicula)].

PubMed

Stekol'nikov, A A

2001-01-01

A revision of chigger mites species being closely related to Neotrombicula talmiensis (Schluger, 1955) has been performed. 2 new species are described: N. pontica sp. n. from Krasnodar Territory (Western Caucasus) and N. sympatrica sp. n. from Krasnodar Territory, Daghestan, Tuva, Armenia, Kirghizia and Turkey (Rize Province). N. pontica sp. n. is closely related to N. carpathica Schluger et Vysotzkaya, 1970 and differs from this species by the larger number of idiosomal setae (NDV = = 75-99 against 63-77), shorter legs (Ip = 782-847 against 844-920, TaIII = 67-74 against 70-80), lesser m-t (0.180 against 0.192), slightly lesser scutum and slightly longer setae. N. sympatrica sp. n. is closely related to N. carpathica and differs from this species by the longer scutal and idiosomal setae (PL = 67-78 against 57-69, H = 65-75 against 57-68, Dmin = 43-52 against 39-48, Dmax = 61-70 against 54-64), longer legs (Ip = 892-973 against 844-920, TaIII = = 77-86 against 70-80) and lesser m-t (0.168 against 0.192). N. carpathica is reported for the first time from Northern Caucasus (Karachai-Cherkess Republic, Kabardino-Balkaria, North Ossetia); N. talmiensis is reported for the first time from Khakasia. Data on joint occurrence of 3 species are reported. The 3 types of sympatric pairs of the species have been found in the Western Caucasus: 1) N. pontica sp. n. and N. sympatrica sp. n., 2) N. sympatrica sp. n., and N. carpathica, 3) N. pontica sp. n., and N. carpathica. Differences between species in that localities, where the joint occurrence was recorded, have been analysed. Sympatric relations between N. sympatrica sp. n. and N. carpathica are characterized by increased value of some general diagnostic characters of these species, such as the length of idiosomal setae and length of legs. Different characters play main distinguishing role in different sympatric localities. Besides that, some local features appear in certain species of sympatric pairs (narrow scutum in 3 samples of N. carpathica, numerous idiosomal setae in 1 sample of N. sympatrica), that differs the populations of the sympatric pair, and also discriminates such aberrant group from other material of the same species. Functions produced by the method of discriminant analysis are proposed for the purpose of diagnostics in talmiensis group. Tests for assumptions of discriminant analysis, such as normality and homogeneity of variances, has been performed beforehand. Verifications of the functions on test samples demonstrated the good quality of its working. Key to species using discriminant functions has been constructed.

Phylogeographic Analysis of Mitochondrial DNA in Northern Asian Populations

PubMed Central

Derenko, Miroslava ; Malyarchuk, Boris ; Grzybowski, Tomasz ; Denisova, Galina ; Dambueva, Irina ; Perkova, Maria ; Dorzhu, Choduraa ; Luzina, Faina ; Lee, Hong Kyu ; Vanecek, Tomas ; Villems, Richard ; Zakharov, Ilia 

2007-01-01

To elucidate the human colonization process of northern Asia and human dispersals to the Americas, a diverse subset of 71 mitochondrial DNA (mtDNA) lineages was chosen for complete genome sequencing from the collection of 1,432 control-region sequences sampled from 18 autochthonous populations of northern, central, eastern, and southwestern Asia. On the basis of complete mtDNA sequencing, we have revised the classification of haplogroups A, D2, G1, M7, and I; identified six new subhaplogroups (I4, N1e, G1c, M7d, M7e, and J1b2a); and fully characterized haplogroups N1a and G1b, which were previously described only by the first hypervariable segment (HVS1) sequencing and coding-region restriction-fragment–length polymorphism analysis. Our findings indicate that the southern Siberian mtDNA pool harbors several lineages associated with the Late Upper Paleolithic and/or early Neolithic dispersals from both eastern Asia and southwestern Asia/southern Caucasus. Moreover, the phylogeography of the D2 lineages suggests that southern Siberia is likely to be a geographical source for the last postglacial maximum spread of this subhaplogroup to northern Siberia and that the expansion of the D2b branch occurred in Beringia ∼7,000 years ago. In general, a detailed analysis of mtDNA gene pools of northern Asians provides the additional evidence to rule out the existence of a northern Asian route for the initial human colonization of Asia. PMID:17924343

Phylogeographic analysis of mitochondrial DNA in northern Asian populations.

PubMed

Derenko, Miroslava; Malyarchuk, Boris; Grzybowski, Tomasz; Denisova, Galina; Dambueva, Irina; Perkova, Maria; Dorzhu, Choduraa; Luzina, Faina; Lee, Hong Kyu; Vanecek, Tomas; Villems, Richard; Zakharov, Ilia

2007-11-01

To elucidate the human colonization process of northern Asia and human dispersals to the Americas, a diverse subset of 71 mitochondrial DNA (mtDNA) lineages was chosen for complete genome sequencing from the collection of 1,432 control-region sequences sampled from 18 autochthonous populations of northern, central, eastern, and southwestern Asia. On the basis of complete mtDNA sequencing, we have revised the classification of haplogroups A, D2, G1, M7, and I; identified six new subhaplogroups (I4, N1e, G1c, M7d, M7e, and J1b2a); and fully characterized haplogroups N1a and G1b, which were previously described only by the first hypervariable segment (HVS1) sequencing and coding-region restriction-fragment-length polymorphism analysis. Our findings indicate that the southern Siberian mtDNA pool harbors several lineages associated with the Late Upper Paleolithic and/or early Neolithic dispersals from both eastern Asia and southwestern Asia/southern Caucasus. Moreover, the phylogeography of the D2 lineages suggests that southern Siberia is likely to be a geographical source for the last postglacial maximum spread of this subhaplogroup to northern Siberia and that the expansion of the D2b branch occurred in Beringia ~7,000 years ago. In general, a detailed analysis of mtDNA gene pools of northern Asians provides the additional evidence to rule out the existence of a northern Asian route for the initial human colonization of Asia.

Planktonic foraminifers and radiolarians from the Coniacian-santonian deposits of the Mt. Ak-Kaya, Crimean Mountains, Ukraine

NASA Astrophysics Data System (ADS)

Korchagin, O. A.; Bragina, L. G.; Bragin, N. Yu.

2012-02-01

The first data on the distribution of planktonic foraminifers and radiolarians in the Mt. Ak-Kaya section, the central Crimean Mountains, are considered. According to the analyzed distribution of foraminifers, the Upper Cretaceous deposits of the section are subdivided into three biostratigraphic units: the Marginotruncana austinensis-Globotruncana desioi (presumably upper Coniacian), Sigalia carpatica (uppermost Coniacian-lower Santonian), and Contusotruncana fornicata-Marginotruncana marginata (upper Santonian) beds. Subdivisions substantiated by distribution of radiolarians are the Alievium praegallowayi-Crucella plana (upper Coniacian-lower Santonian), Alievium gallowayi-Crucella espartoensis (the upper Santonian excluding its uppermost part), and Dictyocephalus (Dictyocryphalus) (?) legumen-Spongosaturninus parvulus (the uppermost Santonian) beds. The Contusotruncana fornicata-Marginotruncana marginata Beds are concurrent to the middle part of the Marsupites laevigatus Zone coupled with the Marsupites testudinarius Zone (the uppermost Santonian). The Alievium gallowayi-Crucella espartoensis Beds are correlative with the upper part of the Alievium gallowayi Zone in the Californian radiolarian zonation. The cooccurring assemblages of planktonic foraminifers and radiolarians provide a possibility to correlate the Coniacian-Santonian deposits within the Crimea-Caucasus region.

Active convergence between the Lesser and Greater Caucasus in Georgia: Constraints on the tectonic evolution of the Lesser-Greater Caucasus continental collision

NASA Astrophysics Data System (ADS)

Sokhadze, G.; Floyd, M.; Godoladze, T.; King, R.; Cowgill, E. S.; Javakhishvili, Z.; Hahubia, G.; Reilinger, R.

2018-01-01

We present and interpret newly determined site motions derived from GPS observations made from 2008 through 2016 in the Republic of Georgia, which constrain the rate and locus of active shortening in the Lesser-Greater Caucasus continental collision zone. Observation sites are located along two ∼160 km-long profiles crossing the Lesser-Greater Caucasus boundary zone: one crossing the Rioni Basin in western Georgia and the other crossing further east near the longitude of Tbilisi. Convergence across the Rioni Basin Profile occurs along the southern margin of the Greater Caucasus, near the surface trace of the north-dipping Main Caucasus Thrust Fault (MCTF) system, and is consistent with strain accumulation on the fault that generated the 1991 MW6.9 Racha earthquake. In contrast, convergence along the Tbilisi Profile occurs near Tbilisi and the northern boundary of the Lesser Caucasus (near the south-dipping Lesser Caucasus Thrust Fault), approximately 50-70 km south of the MCTF, which is inactive within the resolution of geodetic observations (< ± 0.5 mm/yr) at the location of the Tbilisi Profile. We suggest that the southward offset of convergence along strike of the range is related to the incipient collision of the Lesser-Greater Caucasus, and closing of the intervening Kura Basin, which is most advanced along this segment of the collision zone. The identification of active shortening near Tbilisi requires a reevaluation of seismic hazards in this area.

Re-Os dating of mineralization in Siah Kamar porphyry Mo deposit (NW Iran) and investigating on its temporal relationship with porphyry Cu-Mo deposits in the southern Lesser Caucasus, NW and central Iran

NASA Astrophysics Data System (ADS)

Simmonds, Vartan; Moazzen, Mohssen; Selby, David

2017-04-01

The Neo-Tethyan basin closure in Iran is characterized by the Urumieh-Dokhtar magmatic arc (UDMA), formed by north-eastward subduction of the Neo-Tethyan oceanic crust during the Alpine orogeny. This belt also coincides with the porphyry copper metallogenic belt of Iran, which hosts many porphyry Cu-Mo deposits (PCDs) and prospects, such as Sungun (NW Iran) and Sarcheshmeh (central Iran). The Siah Kamar porphyry Mo deposit (PMD) is the first discovered porphyry molybdenum deposit on this belt, which is located 10 km west of Mianeh (NW Iran), with 39.2 Mt proved reserves @ 539 ppm Mo and 66.4 Mt probable reserves @ 266 ppm Mo. The host porphyry stock has quartz-monzonitic composition, which intruded the volcanic and pyroclastic rocks of Eocene age. Re content of molybdenites is about 10.44-41.05 ppm which, considering the several tens of ppm concentration, is comparable with porphyry Mo deposits (e.g., Climax in USA), being clearly distinguished from porphyry Cu-Mo deposits. Re-Os dating of molybdenites from this PMD has given model ages between 28.1±0.15 to 29.06±0.2 Ma, and isochron age of 28.0±2.1 Ma, corresponding to the middle Oligocene (upper part of Rupelian). Comparing the ages determined for Siah Kamar PMD with porphyry Cu-Mo mineralizations in the Lesser Caucasus indicates that it is younger than most of the dated PCDs and prospects there, especially those of upper Eocene, while it is a little older than Paragachay and first-stage Kadjaran PCDs [1]. In a regional scale of NW Iran, it shows a narrow overlap with vein-type Cu-Mo-Au mineralizations in Qarachilar (Qaradagh batholith) and is nearly coeval with Haftcheshmeh PCD, indicating that mineralization in the Siah Kamar PMD corresponds to the second porphyry mineralization epoch in NW Iran, proposed by [2]. Meanwhile, mineralization in Siah Kamar is older than all the porphyry Cu-Mo mineralizations along the central and SE parts of the UDMA, except the Bondar Hanza PCD in Kerman zone, which nearly correlates with the Siah Kamar PMD. This signifies the episodic nature of magmatic activities and the related mineralizations along the UDMA and meanwhile, indicates that collision between the Arabian and Iranian plates was dischronous, being earlier in NW Iran and later in SE Iran, which can be resulted from the oblique convergence of these plates. Therefore, while the north-western part of the Neo-Tethyan basin (in the Lesser Caucasus and NW Iran) was closed in lower Eocene [1], its SE section was still open and so, the magmatism and mineralizations resulted from the melting of subducting slab and mantle metasomatism vary temporally along the UDMA. [1] Moritz, R., Rezeau, H., Ovtcharova, M., Tayan, R., Melkonyan, R., Hovakimyan, S., Ramazanov, V., Selby, D., Ulianov, A., Chiaradia, M., and Putlitz, B. (2016) Long-lived, stationary magmatism and pulsed porphyry systems during Tethyan subduction to post-collision evolution in the southernmost Lesser Caucasus, Armenia and Nakhitchevan. Gondwana Research, 37, 465-503. [2] Simmonds, V., Moazzen, M., and Mathur, R. (2016) Investigation on the age of mineralization in the Sungun porphyry Cu-Mo deposit, NW Iran with a regional metallogenic perspective. EGU General Assembly, 17-22 April 2016, Vienna.

Quantifying Arabia-Eurasia convergence accommodated in the Greater Caucasus by paleomagnetic reconstruction

NASA Astrophysics Data System (ADS)

van der Boon, A.; van Hinsbergen, D. J. J.; Rezaeian, M.; Gürer, D.; Honarmand, M.; Pastor-Galán, D.; Krijgsman, W.; Langereis, C. G.

2018-01-01

Since the late Eocene, convergence and subsequent collision between Arabia and Eurasia was accommodated both in the overriding Eurasian plate forming the Greater Caucasus orogen and the Iranian plateau, and by subduction and accretion of the Neotethys and Arabian margin forming the East Anatolian plateau and the Zagros. To quantify how much Arabia-Eurasia convergence was accommodated in the Greater Caucasus region, we here provide new paleomagnetic results from 97 volcanic sites (∼500 samples) in the Talysh Mountains of NW Iran, that show ∼15° net clockwise rotation relative to Eurasia since the Eocene. We apply a first-order kinematic restoration of the northward convex orocline that formed to the south of the Greater Caucasus, integrating our new data with previously published constraints on rotations of the Eastern Pontides and Lesser Caucasus. This suggests that north of the Talysh ∼120 km of convergence must have been accommodated. North of the Eastern Pontides and Lesser Caucasus this is significantly more: 200-280 km. Our reconstruction independently confirms previous Caucasus convergence estimates. Moreover, we show for the first time a sharp contrast of convergence between the Lesser Caucasus and the Talysh. This implies that the ancient Paleozoic-Mesozoic transform plate boundary, preserved between the Iranian and East-Anatolian plateaus, was likely reactivated as a right-lateral transform fault since late Eocene time.

Ecology and pathology of European chestnut (Castanea sativa) in the deciduous forests of the Caucasus Mountains in southern Russia

USGS Publications Warehouse

Pridnya, M.V.; Cherpakov, V.V.; Paillet, Frederick L.

1996-01-01

Chestnut-dominated forests of the Caucasus Mountain area of Russia are very similar to former chestnut-dominated forests in eastern North America. The distribution, pathology, and reproductive status of European chestnut (Castanea sativa) in the Caucasus are described and compared to that of American chestnut (C. dentata). Chestnut forests are distributed continuously along the southern slope of the Caucasus mountains near the Black Sea, and are found in isolated populations on the north side of the Caucasus, at elevations ranging from 200 to 1300 meters. Chestnut blight was apparently introduced into the region after 1880 and continues to destroy chestnut forests today. Chestnut in the Caucasus is also infected by several other fungal and bacterial parasites and the joint infection of blight and bacteria may be especially dangerous for chestnut trees. Chestnut-dominated forests comprise only a few percent of total forest cover in the Caucasus Biosphere Preserve, and usually occur in mountain valleys or coves with deep brown soil. The age structure and reproductive status of chestnut in the Caucasus was investigated on six study plots in the Caucasus Biosphere Forest Preserve near the upper altitudinal limit of chestnut. Although chestnut is at least 70 percent of the overstory on these sites, there are very few trees less than 50 years old, and very few recent seedlings on any of the plots. Most large chestnut trees appear to have originated as basal spouts from previously established stems. Although chestnut seed production appears adequate, we suspect that competition with shrubs and other tree seedlings, and predation by herbivores and rodents, now prevent the establishment and survival of chestnut seedlings in the Biosphere Preserve.

Deep structure of the western part of the Central Caucasus from geophysical data

NASA Astrophysics Data System (ADS)

Shempelev, A. G.; Zaalishvili, V. B.; Kukhmazov, S. U.

2017-09-01

The paper presents new data on seismotectonic studies along the Adygei profile in the western part of the Central Caucasus and provides an overview of deep geophysical studies of the Greater Caucasus. For the first time, comprehensive geophysical characteristics of a crustal section of the Greater Caucasus across an orogenic structure (along the Adygei profile) have been obtained with a uniform step of observations. Based on factual data obtained by such methods as converted waves from distant earthquakes, magnetotelluric sounding, and gravimagnetic surveys, sinking of the marginal part of the southern microplate into the mantle is verified. It is noted that the contemporary Alpine structure of the Greater Caucasus formed during gentle thrusting of the Earth's crust (Scythian Plate) from the north on the consolidated crust of the southern microplate.

The Caucasus Seismic Network (CNET): Seismic Structure of the Greater and Lesser Caucasus

NASA Astrophysics Data System (ADS)

Sandvol, E. A.; Mackey, K. G.; Nabelek, J.; Yetermishli, G.; Godoladze, T.; Babayan, H.; Malovichko, A.

2017-12-01

The Greater Caucasus are a portion of the Alpine-Himalayan mountain belt that has undergone rapid uplift in the past 5 million years, thus serving as a unique natural laboratory to study the early stages of orogenesis. Relatively lower resolution seismic velocity models of this region show contradictory lateral variability. Furthermore, recent waveform modeling of seismograms has clearly demonstrated the presence of deep earthquakes (with a maximum hypocentral depth of 175 km) below the Greater Caucasus. The region has been largely unexplored in terms of the detailed uppermost mantle and crustal seismic structure due in part to the disparate data sets that have not yet been merged as well as key portions being sparsely instrumented. We have established collaborative agreements across the region. Building on these agreements we recently deployed a major multi-national seismic array across the Greater Caucasus to address fundamental questions about the nature of continental deformation in this poorly understood region. Our seismic array has two components: (1) a grid of stations spanning the entire Caucasus and (2) two seismic transects consisting of stations spaced at distances of less than 10 km that cross the Greater Caucasus. In addition to the temporary stations, we are working to integrate data from the national networks to produce high resolution images of the seismic structure. Using data from over 106 new seismic stations in Azerbaijan, Armenia, Russia, and Georgia, we hope to gain a better understanding of the recent uplift ( 5 Ma) of the Greater Caucasus and the nature of seismogenic deformation in the region.

Variation in Crustal Structure of the Lesser Caucasus Region from Teleseismic Receiver Functions

NASA Astrophysics Data System (ADS)

Lin, C. M.; Tseng, T. L.; Huang, B. S.; Legendre, C. P.; Karakhanian, A.

2016-12-01

The Caucasus, including the mountains of Greater and Lesser Caucasus, is formed by the continental collision between Arabia and Eurasia. The crustal thickness for this region was mostly constrained by joint analysis of receiver functions and surface waves. Although the thickest value of 52 km was reported under the Lesser Caucasus, the resolution of earlier studies were often limited by sparse array. Large gradient across Moho also makes the definition of Moho difficult. Moreover, higher value of the Vp/Vs ratio is commonly reported in the northeastern Turkey but no estimates had been made for the Caucasus. To further investigate the detail structure around the Lesser Caucasus, we constructed a new seismic network in Georgia and Armenia. We also include other broadband stations to enhance the coverage. The average interval in the Lesser Caucasus is roughly 30 km, much denser than any previous experiments. We selected P-waveforms from teleseismic earthquakes during the operation (January 2012 - June 2016) to calculate receiver functions and then estimate the crustal thickness (H) and Vp/Vs ratio (k) with the H-k stacking technique. Our preliminary results show that Moho depth increases from 40 km under the northeastern Turkey to 50 km beneath northern Georgia, no station with Moho deeper than 50 km under the Lesser Caucasus. The Vp/Vs ratios in the northeastern Anatolian plateau are around 1.8, which is slightly higher than the average of global continents but consistent with the previous estimates. Further to the east, some stations show anomalously higher Vp/Vs ratio in central & southern Armenia that may be associated with Holocene volcanism. In the future, we plan to join locally measured dispersion curves to invert the velocity model without velocity-depth trade-off. We expect to resolve the velocity variations of the crust beneath this region in small scale that may be tied to the continental collision and surface volcanism. Keywords: Caucasus, receiver function, continental collision, volcanic plateau, crustal structure

Thermal history, exhumation, uplift, and long-term landscape evolution of the Eastern Great and Northern Lesser Caucasus, Azerbaijan

NASA Astrophysics Data System (ADS)

Spilger, Tatiana; Glasmacher, Ulrich Anton; Mosar, Jon

2015-04-01

The Caucasus orogen (Great and Lesser Caucasus) is the highest mountain range between Asia and Europe, whose growth takes place since the beginning of the Cenozoic (Mosar et al. 2010). The orogen has evolved as a result of the active north directed convergence of the Arabian plate (Nikishin et al. 2001). The Great Caucasus (GC) represents a doubly verging fold-and-thrust belt, with a per-and a retro wedge actively propagating into the foreland sedimentary basins to the south and to the north (Sholpo 1993). Thermochronometric techniques (fission-track, (U-Th-Sm)/He, each on apatite and zircon) are used to reconstruct the thermal evolution of the upper crust, the subsidence, as well as the rock and surface uplift of the Eastern GC and Northern Lesser Caucasus and to connect them with the thrust kinematics of the GC. Samples were taken along different transects in Eastern GC and Northern Lesser Caucasus in Azerbaijan. Most samples of Eastern GC are Lower Jurassic age sandstones (deep marine and slope facies). Several sedimentary rock samples of Cretaceous, Miocene, Pliocene and Quaternary age were taken from the outcrops in the Kura basin and along rivers in the Eastern GC. Samples of the Lesser Caucasus are igneous and sedimentary origin and have Lower Jurassic to Holocene age. The first AFT-data in the Eastern Great Caucasus were investigated. All researched samples show recessed AF-ages. Most dated sedimentary samples have several populations of apatite minerals. Apatite minerals have low U-concentration (up to 10 ppm). Most dated samples taken in Aalenian sandstone have very young AFT-ages (up to 10 Ma). Some samples show Oligocene AF-ages of 23-28Ma. The preliminary data confirm orogeny in the Eastern Great Caucasus since Oligocene and propagation of orogeny since middle Miocene (Mosar et al. 2010). References Mosar, J., Kangarli, T., Bochud, M., Glasmacher, U.A., Rast, A., Brunet, M.-F. & Sosson, M. 2010. Cenozoic-Recent tectonics and uplift in the Greater Caucasus: a perspective from Azerbaijan. Geological Society, , Special Publications 340 1: 261-280; London. Nikishin, A.M., Ziegler, P., Panov, D.I., Nazarevich, B.P., Brunet, M.-F., Stephenson, R.A., Bolotov, S.N., Korataev, M.V. & Tiknomirov, P.L. 2001. Mesozoic and Cainozoic evolution of the Scythian Platform - Black Sea - Caucasus domain. In: Ziegler, P., Cavazza, W., Robertson, A.H.F. & Crasquin-Soleau, S. (éd.) Peri-Tethys Memoir 6 - Peri-Tethyan rift/wrench basins and passive margins. Mémoires du Muséum natn. Hist. nat., 186: 295-346; Paris. Sholpo, V.N 1993. Strucure of inversion anticlinoria in the core of the Greater Caucasus: an advection hypothesis. Geotectonics 23: 245-251.

48 CFR 252.225-7035 - Buy American-Free Trade Agreements-Balance of Payments Program Certificate.

Code of Federal Regulations, 2013 CFR

2013-10-01

....1101(9)(iii), add the terms “South Caucasus/Central and South Asian (SC/CASA) state” and “South Caucasus/Central and South Asian (SC/CASA) state end product” in paragraph (a) and substitute the following... end product, South Caucasus/Central and South Asian (SC/CASA) state end product, and United States...

48 CFR 252.225-7035 - Buy American-Free Trade Agreements-Balance of Payments Program Certificate.

Code of Federal Regulations, 2012 CFR

2012-10-01

....1101(10)(iii), add the terms “South Caucasus/Central and South Asian (SC/CASA) state” and “South Caucasus/Central and South Asian (SC/CASA) state end product” in paragraph (a) and substitute the following..., South Caucasus/Central and South Asian (SC/CASA) state end product, and United States have the meanings...

48 CFR 252.225-7035 - Buy American-Free Trade Agreements-Balance of Payments Program Certificate.

Code of Federal Regulations, 2014 CFR

2014-10-01

... (NOV 2012) As prescribed in 225.1101(9)(iii), add the terms “South Caucasus/Central and South Asian (SC/CASA) state” and “South Caucasus/Central and South Asian (SC/CASA) state end product” in paragraph (a..., foreign end product, qualifying country end product, South Caucasus/Central and South Asian (SC/CASA...

Convergence between the Georgian Lesser and Greater Caucasus: Implications for seismic risk around Tbilisi

NASA Astrophysics Data System (ADS)

Sokhadze, Giorgi; Floyd, Michael; Godoladze, Tea; King, Robert; Cowgill, Eric; Javakhishvili, Zurab; Hahubia, Galaktion; Reilinger, Robert

2017-04-01

The Caucasus region, including the Lesser and Greater Caucasus Mountains and intervening Rioni, Kartli and Kura basins, defines the northern margin of the Arabia-Eurasia continental collision between the Black and Caspian Seas. Although geodetic, geologic and seismological data attest to active crustal shortening in the region, both the structures accommodating this deformation and the potential seismic hazards they pose remain unclear. Here we present and interpret newly determined site motions derived from GPS observations made at 21 campaign sites and 4 continuous GPS stations in the Republic of Georgia from 2008 through 2015. The sites are located along two, 160 km-long, range-perpendicular profiles crossing the Lesser-Greater Caucasus boundary zone. The Racha profile in the west spans the Rioni Basin and epicentral area of the 1991 Mw6.9 Racha earthquake. To the east, the Tbilisi profile crosses near the capital city of Tbilisi, with a population of 1.2 million. To estimate site velocities, we processed the GPS observations using the GAMIT/GLOBK software package, and then combined new and previously published velocities in a common Eurasian reference frame. Both profiles indicate 3 mm/yr of shortening between the Greater and Lesser Caucasus. On the Racha profile, the locus of shortening roughly coincides with the Main Caucasus Thrust Fault as defined by the location of the 1991 Racha earthquake. In contrast, on the Tbilisi profile shortening is concentrated 40-60 km further south, in the vicinity of the Lesser Caucasus Thrust Fault (locally, the Adjara-Trialeti Fault). Simple elastic models of planar faults in an elastic half-space indicate that convergence along the Racha profile is consistent with strain accumulation on a north-dipping thrust fault rooting beneath the Greater Caucasus, generally consistent with the coseismic fault parameters for the 1991 Racha earthquake. In contrast, principal convergence along the Tbilisi profile appears to be associated with a fault that roots near the northern boundary of the Lesser Caucasus. This change in the location of active convergence may be related to incipient collision between the Lesser and Greater Caucasus blocks that is occurring along this section of the boundary ( 44°E). Focused geodetic, seismic and neotectonic investigations are continuing to better characterize the underlying structures accommodating shortening, and associated seismic hazards around Tbilisi.

Active deformation processes of the Northern Caucasus deduced from the GPS observations

NASA Astrophysics Data System (ADS)

Milyukov, Vadim; Mironov, Alexey; Rogozhin, Eugeny; Steblov, Grigory; Gabsatarov, Yury

2015-04-01

The Northern Caucasus, as a part of the Alpine-Himalayan mobile belt, is a zone of complex tectonics associated with the interaction of the two major tectonic plates, Arabian and Eurasian. The first GPS study of the contemporary geodynamics of the Caucasus mountain system were launched in the early 1990s in the framework of the Russia-US joint project. Since 2005 observations of the modern tectonic motion of the Northern Caucasus are carried out using the continuous GPS network. This network encompasses the territory of three Northern Caucasian Republics of the Russian Federation: Karachay-Cherkessia, Kabardino-Balkaria, and North Ossetia. In the Ossetian part of the Northern Caucasus the network of GPS survey-mode sites has been deployed as well. The GPS velocities confirm weak general compression of the Northern Caucasus with at the rate of about 1-2 mm/year. This horizontal motion at the boundary of the Northern Caucasus with respect to the Eurasian plate causes the higher seismic and tectonic activity of this transition zone. This result confirms that the source of deformation of the Northern Caucasus is the sub-meridional drift of the Arabian plate towards the adjacent boundary of the Eastern European part of the Eurasian lithospheric plate. The concept of such convergence implies that the Caucasian segment of the Alpine-Himalayan mobile belt is under compression, the layers of sedimentary and volcanic rocks are folded, the basement blocks are subject to shifts in various directions, and the upper crust layers are ruptured by reverse faults and thrusts. Weak deviation of observed velocities from the pattern corresponding to homogeneous compression can also be revealed, and numerical modeling of deformations of major regional tectonic structures, such as the Main Caucasus Ridge, can explain this. The deformation tensor deduced from the velocity field also exhibits the sub-meridional direction of the major compressional axes which coincides with the direction of the relative Arabian-Eurasian plate motion. This work is partly supported by the Russian Foundation for Basic Research under Grant No 14-45-01005 and № 14-05-90411.

The Missing Link of Jewish European Ancestry: Contrasting the Rhineland and the Khazarian Hypotheses

PubMed Central

Elhaik, Eran

2013-01-01

The question of Jewish ancestry has been the subject of controversy for over two centuries and has yet to be resolved. The “Rhineland hypothesis” depicts Eastern European Jews as a “population isolate” that emerged from a small group of German Jews who migrated eastward and expanded rapidly. Alternatively, the “Khazarian hypothesis” suggests that Eastern European Jews descended from the Khazars, an amalgam of Turkic clans that settled the Caucasus in the early centuries CE and converted to Judaism in the 8th century. Mesopotamian and Greco–Roman Jews continuously reinforced the Judaized empire until the 13th century. Following the collapse of their empire, the Judeo–Khazars fled to Eastern Europe. The rise of European Jewry is therefore explained by the contribution of the Judeo–Khazars. Thus far, however, the Khazars’ contribution has been estimated only empirically, as the absence of genome-wide data from Caucasus populations precluded testing the Khazarian hypothesis. Recent sequencing of modern Caucasus populations prompted us to revisit the Khazarian hypothesis and compare it with the Rhineland hypothesis. We applied a wide range of population genetic analyses to compare these two hypotheses. Our findings support the Khazarian hypothesis and portray the European Jewish genome as a mosaic of Near Eastern-Caucasus, European, and Semitic ancestries, thereby consolidating previous contradictory reports of Jewish ancestry. We further describe a major difference among Caucasus populations explained by the early presence of Judeans in the Southern and Central Caucasus. Our results have important implications for the demographic forces that shaped the genetic diversity in the Caucasus and for medical studies. PMID:23241444

The missing link of Jewish European ancestry: contrasting the Rhineland and the Khazarian hypotheses.

PubMed

Elhaik, Eran

2013-01-01

The question of Jewish ancestry has been the subject of controversy for over two centuries and has yet to be resolved. The "Rhineland hypothesis" depicts Eastern European Jews as a "population isolate" that emerged from a small group of German Jews who migrated eastward and expanded rapidly. Alternatively, the "Khazarian hypothesis" suggests that Eastern European Jews descended from the Khazars, an amalgam of Turkic clans that settled the Caucasus in the early centuries CE and converted to Judaism in the 8th century. Mesopotamian and Greco-Roman Jews continuously reinforced the Judaized empire until the 13th century. Following the collapse of their empire, the Judeo-Khazars fled to Eastern Europe. The rise of European Jewry is therefore explained by the contribution of the Judeo-Khazars. Thus far, however, the Khazars' contribution has been estimated only empirically, as the absence of genome-wide data from Caucasus populations precluded testing the Khazarian hypothesis. Recent sequencing of modern Caucasus populations prompted us to revisit the Khazarian hypothesis and compare it with the Rhineland hypothesis. We applied a wide range of population genetic analyses to compare these two hypotheses. Our findings support the Khazarian hypothesis and portray the European Jewish genome as a mosaic of Near Eastern-Caucasus, European, and Semitic ancestries, thereby consolidating previous contradictory reports of Jewish ancestry. We further describe a major difference among Caucasus populations explained by the early presence of Judeans in the Southern and Central Caucasus. Our results have important implications for the demographic forces that shaped the genetic diversity in the Caucasus and for medical studies.

[The state of obstetrics in the national republics of North Caucasus during the first half of XX century].

PubMed

Iakh'iaeva, Z I; Bataev, Kh M

2011-01-01

In Caucasus, during the first half of XX century the organization of obstetric gynecological care of women accompanied by significant problems to be resolved in the conditions of burning deficiency of material and manpower resources. In the early 1950s the functioning of the system of obstetrics in the North Caucasus region needed more intensive organizational efforts and highest possible involvement of medical science achievements.

High-Resolution Seismic Velocity and Attenuation Models of the Caucasus-Caspian Region

DTIC Science & Technology

2009-09-30

region is part of the Alpine-Himalayan collision belt and is an area of complex structure accompanied by large variations in seismic wave velocities...velocity structure is developed using teleseismic receiver functions and surface waves. Joint inversion of surface wave group dispersion curves...Caucasus and the thinnest is in the Arabian Plate. Thin crust is also observed near the Caspian. The lithospheric mantle in the Greater Caucasus and the

Radio-echo sounding of Caucasus glaciers

NASA Astrophysics Data System (ADS)

Lavrentiev, Ivan; Kutuzov, Stanislav; Vasilenko, Evgeny; Macheret, Yuri

2013-04-01

Accurate glacier volume and ice-thickness estimations are highly important for many glaciological applications. Recent glacier reduction is affecting local river discharge and contributes to the global sea level rise. However, direct measurements of ice thickness are very sparse due to its high cost and laboriousness. One of the glacierized mountain regions with a lack of direct ice-thickness measurements is Caucasus. So far data for several seismic and GPR profiles have been reported for only 3 glaciers from more than 1.7 thousands located in Caucasus. In 2010-2012 a number of ground base and airborne radio-echo sounding surveys have been accomplished in Caucasus Mountains using 20 MHz monopulse radar VIRL-6. Special aerial version of this ground penetrating radar was designed for helicopter-born measurements. The radar has a relatively long (10 m) receiving and transmitting antennas, which together with receiving, recording and transmitting devices can be mounted on a special girder, being suspended from a helicopter. VIRL-6 radar is light weight and can be quickly transformed into ground version. Equipment has been used on 16 glaciers including biggest glacier in Caucasus - Bezengi (36 km2) most of which have a highly crevassed surfaces and heterogeneous internal structure. Independent data were obtained also for two glaciers using ground version of the same VIRL-6 radar. In total more than 120 km of radar profiles were obtained. Results showed good agreement between ground and aerial measurements. Ice-thickness values exceeded 420 m for some of the Central Caucasus glaciers. Successful use of VIRL-6 radar in Caucasus opens up the possibility of using such equipment on different types of glaciers in polar and mountain regions, including temperate, polythermal and surging glaciers.

Assessment of seismic hazard in the North Caucasus

NASA Astrophysics Data System (ADS)

Ulomov, V. I.; Danilova, T. I.; Medvedeva, N. S.; Polyakova, T. P.; Shumilina, L. S.

2007-07-01

The seismicity of the North Caucasus is the highest in the European part of Russia. The detection of potential seismic sources here and long-term prediction of earthquakes are extremely important for the assessment of seismic hazard and seismic risk in this densely populated and industrially developed region of the country. The seismogenic structures of the Iran-Caucasus-Anatolia and Central Asia regions, adjacent to European Russia, are the subjects of this study. These structures are responsible for the specific features of regional seismicity and for the geodynamic interaction with adjacent areas of the Scythian and Turan platforms. The most probable potential sources of earthquakes with magnitudes M = 7.0 ± 0.2 and 7.5 ± 0.2 in the North Caucasus are located. The possible macroseismic effect of one of them is assessed.

Tectonics, recent geodynamics and seismicity of Azerbaijan part of the Greater Caucasus

NASA Astrophysics Data System (ADS)

Aliyev, Fuad; Kangarli, Talat; Rahimov, Fuad; Murtuzov, Zaur; Aliyev, Ziya

2016-04-01

Transition area of the Eastern Caucasus - Caspian Megadepression corresponds to a periclinal submergence zone of the mountain folded structure of the Greater Caucasus under Pliocene-Holocenic sedimentary complex of Caspian megabasin. Being a part of Alpine-Himalayan folded belt, Greater Caucasus has formed during alpine stage of tectogenesis under geodynamic conditions of convergent interactions between Northern and Southern Caucasus continental microplates. This process has been accompanied by pseudosubduction of the first plate under the second with formation of allochtonous accretion prism above underthrust zone. Modern folding and napping structure of the orogeny has formed as a result of the horizontal movements of different phases and subphases of alpine tectogenesis, that are presented represented by Late Cimmerian - Wallachian tectonic phases within Azerbaijan territory. Limited by meridional fault-slip zones, Caspian megadepression present itself as a young structure that layered on sublatitudinal convergent zone and developed during Late Miocene (10 million years ago) as a flexure zone between two indenters which actively move northward provoking their separation from the African continent and Arabian plate in the west and secession from Central Iranian plate of the Lut block in the east. The acting movement of Arabian plate to the north results in accumulation of the horizontal stress at the current stage of tectogenesis. Current process reveals itself both in the fragmentation of Southern and Northern Caucasus continental microplates into various-size blocks along the general and anti-Caucasus trended faults, and in consideration horizontal and vertical movements within the convergence zone. All these factors define the complexity of geodynamic condition revealed here, in which seismic activity of a transition zone become apparent. There exist the seismic zones here that are confined both to a convergence line and to the fault zones that confine Caspian megadepression or complicate its' inner structure. Under lateral compression conditions, the small-size dynamic blocks that form the inner structure of the earth crust in a transition zone is standing as a reason of formation of the transpressive deformations, which combine moving along bordering of transversal dislocations with the compression structures like Main Caucasus strike faults in a trend of convergent (pseudosubduction) interaction of Southern and Northern Caucasus continental microplates. During such regime a multiple elastic stress accumulation zones are developing, that are confined to mentioned dislocations and their connection knots. Namely, exceeding of a breakage point of the rocks by accumulated elastic deformations, results in earthquakes and destructions in such tectonically vulnerable transition zones.

Reconciling Geodetic Deformation and Long-term Exhumation Rates Across the Western Greater Caucasus

NASA Astrophysics Data System (ADS)

Avdeev, B.; Niemi, N. A.

2011-12-01

Low modern geodetic strain rates and minimal instrumentally recorded seismicity in the western Greater Caucasus contradict the the high topography, deep exhumation, and young low-temperature thermochronometric ages indicative of active tectonic deformation in this mountain range. We use new and existing low-temperature thermochronometric data to show that the rate of present-day convergence across the range is sufficient to sustain observed rates of long-term exhumation and topographic growth. Thus, it is possible that the western Greater Caucasus has existed in an erosional steady state since shortly after the onset of exhumation of the range in Pliocene. We employ a Markov chain Monte Carlo algorithm to estimate the parameters of a thermokinematic model constrained by thermochronometric data and a focal mechanism solution from the 1991 Racha earthquake. We find that the thermochronometric data are best fit by exhumation commencing at ~4 Ma and driven by 3-5 mm/y of overthrusting on the Main Caucasus thrust dipping 40-45° at the surface and becoming flat at a depth of 15-20 km. This long-term exhumation model was compared with active rates of convergence in the western Greater Caucasus using an elastic half-space deformation model to estimate the geometry and rate of slip on a buried dislocation that best fits the observed geodetic velocity field. The estimated active slip of 4-7 mm/y is comparable to the long-term rate of overthrusting and is, therefore, sufficient to produce the observed rock uplift. Up to 4 mm/y excess of active convergence may potentially be consumed by underthrusting of the Transcaucasus or on faults south of the Main Caucasus thrust. We conclude that high rates of rock uplift observed in the western Greater Caucasus are the result of focused shortening occurring on a single fault. This differs from the deformation style of the eastern Greater Caucasus, where a larger amount of shortening is distributed across the width of the range with slip occurring on numerous north and south-verging thrusts, resulting in lower uplift rates, lower relief, and lower exhumation. We hypothesize that this difference in tectonic styles is a result of differences in the lithosphere of the eastern and western Transcaucasus. To the west, the Greater Caucasus are juxtaposed against an ancient strong and buoyant micro-continent, while on the east, they are faulted against a Jurassic island arc that is likely to have a thinner, less competent lithosphere.

Complete Mitochondrial DNA Diversity in Iranians

PubMed Central

Derenko, Miroslava; Malyarchuk, Boris; Bahmanimehr, Ardeshir; Denisova, Galina; Perkova, Maria; Farjadian, Shirin; Yepiskoposyan, Levon

2013-01-01

Due to its pivotal geographical location and proximity to transcontinental migratory routes, Iran has played a key role in subsequent migrations, both prehistoric and historic, between Africa, Asia and Europe. To shed light on the genetic structure of the Iranian population as well as on the expansion patterns and population movements which affected this region, the complete mitochondrial genomes of 352 Iranians were obtained. All Iranian populations studied here exhibit similarly high diversity values comparable to the other groups from the Caucasus, Anatolia and Europe. The results of AMOVA and MDS analyses did not associate any regional and/or linguistic group of populations in the Anatolia/Caucasus and Iran region pointing to close genetic positions of Persians and Qashqais to each other and to Armenians, and Azeris from Iran to Georgians. By reconstructing the complete mtDNA phylogeny of haplogroups R2, N3, U1, U3, U5a1g, U7, H13, HV2, HV12, M5a and C5c we have found a previously unexplored genetic connection between the studied Iranian populations and the Arabian Peninsula, India, Near East and Europe, likely the result of both ancient and recent gene flow. Our results for Persians and Qashqais point to a continuous increase of the population sizes from ∼24 kya to the present, although the phase between 14-24 kya is thought to be hyperarid according to the Gulf Oasis model. Since this would have affected hunter-gatherer ranges and mobility patterns and forced them to increasingly rely on coastal resources, this transition can explain the human expansion across the Persian Gulf region. PMID:24244704

Complex deformation in the Caucasus region revealed by ambient noise seismic tomography

NASA Astrophysics Data System (ADS)

Legendre, Cédric P.; Tseng, Tai-Lin; Chen, Ying-Nien; Huang, Tzu-Ying; Gung, Yuan-Cheng; Karakhanyan, Arkadiy; Huang, Bor-Shouh

2017-08-01

Cross-correlation of 3years of ambient seismic noise recorded at 35 seismic stations deployed in Caucasus region yields hundreds of short-period surface-wave phase-speed dispersion curves on inter-station paths. We inverted these measurements using two techniques to construct tomographic images of the principal geological units of Caucasus. High-resolution isotropic and azimuthally anisotropic phase-velocity maps (at periods between 5 and 20s) and shear-velocity tomographic maps between 5 and 30km are generated. The resulting maps show a velocity dichotomy between the Caucasus region and the surrounding that is interpreted in term of changes in crustal thickness. There is also a strong dichotomy in the anisotropic pattern between the eastern part and the western part of the Caucasus. This difference in both amplitudes and directions of the 2ψ anisotropy is linked to the tectonic regime changes in the region. These observations suggest a good correlation between the tomographic models and the geology of the region. It was also possible to identify the early stage of the indentation of the Arabian Plate into the Eurasian plate, as well as to detect the possible magma chamber responsible for the Javakheti highland.

Parallel Evolution of Genes and Languages in the Caucasus Region

PubMed Central

Balanovsky, Oleg; Dibirova, Khadizhat; Dybo, Anna; Mudrak, Oleg; Frolova, Svetlana; Pocheshkhova, Elvira; Haber, Marc; Platt, Daniel; Schurr, Theodore; Haak, Wolfgang; Kuznetsova, Marina; Radzhabov, Magomed; Balaganskaya, Olga; Romanov, Alexey; Zakharova, Tatiana; Soria Hernanz, David F.; Zalloua, Pierre; Koshel, Sergey; Ruhlen, Merritt; Renfrew, Colin; Wells, R. Spencer; Tyler-Smith, Chris; Balanovska, Elena

2012-01-01

We analyzed 40 SNP and 19 STR Y-chromosomal markers in a large sample of 1,525 indigenous individuals from 14 populations in the Caucasus and 254 additional individuals representing potential source populations. We also employed a lexicostatistical approach to reconstruct the history of the languages of the North Caucasian family spoken by the Caucasus populations. We found a different major haplogroup to be prevalent in each of four sets of populations that occupy distinct geographic regions and belong to different linguistic branches. The haplogroup frequencies correlated with geography and, even more strongly, with language. Within haplogroups, a number of haplotype clusters were shown to be specific to individual populations and languages. The data suggested a direct origin of Caucasus male lineages from the Near East, followed by high levels of isolation, differentiation and genetic drift in situ. Comparison of genetic and linguistic reconstructions covering the last few millennia showed striking correspondences between the topology and dates of the respective gene and language trees, and with documented historical events. Overall, in the Caucasus region, unmatched levels of gene-language co-evolution occurred within geographically isolated populations, probably due to its mountainous terrain. PMID:21571925

Different stages of collision zones on examples of Gujarat province (India) and Caucasus

NASA Astrophysics Data System (ADS)

Zabelina, Irina; Koulakov, Ivan; Ranjan Kayal, Jnana; Pratap Singh, Ajay; Kumar, Santosh; Kukarina, Ekaterina; Amanatashvili, Iason

2016-04-01

In this study we present seismic structures of the crust and upper mantle beneath two regions: Kachchh Gujarat region (India), and Caucasus that may represent different stages of the collisional processes. In both cases, the 3D seismic models were obtained based on tomography inversion of arrival times of P and S seismic waves from local and regional earthquakes. Collisional processes in the Caucasus region began 35 million years ago with the closure of the Tethys Ocean, and continues to this day. The rate of shortening between the Scythian and the Arabian plate is currently 1-2.2 mm/year. The tomography inversion used the dataset provided by several seismic agencies of the Caucasus region that contained 23,071 P- and 21,598 S-picks from 1374 events. The obtained P and S velocity models clearly delineate major tectonic units in the study area. A high velocity anomaly in Transcaucasian separating the Great and Lesser Caucasus possibly represents a rigid crustal block corresponding to the remnant oceanic lithosphere of Tethys. Another high-velocity pattern coincides with the southern edge of the Scythian Plate. Strongly deformed areas of Great and Lesser Caucasus are mostly associated with low-velocity patterns representing thickened felsic part of the crust and strong fracturing of rocks. Most Cenozoic volcanic centers of Caucasus match to the low-velocity seismic anomalies in the crust. We propose that the mantle part of the Arabian and Eurasian Plates has been delaminated due to the continental collision in the Caucasus region. As a result, overheated asthenosphere appeared nearly the bottom of the crust and facilitated melting of the crustal material that caused the origin of recent volcanism in Great and Lesser Caucasus. The Kachchh province, in contrast to the Caucasus, is far from any boundaries of major lithospheric plates. However, this area is one of the most seismically active in India. It is suggested that it may be a site of the lithosphere rupture and initiation of a new collision zone. For the tomography inversion of the Kachchh region we selected the data of 4105 earthquakes with arrival times 29660 P and 30278 S waves. Based on the obtained seismic anomalies, we identify the left-lateral displacement to approximately 70 km along a hidden fault. We suggest that this fault can be associated with a series of ridges having the SW-NE direction, which are clearly seen on the bathymetry of the Indian Ocean bottom. Northwards displacement of the Indo-Australian Plate and contraction with Asia causes strong compression deformations in the broad areas of the Indian Plate. The curved geometry of the western boundary of the Indo-Australian plate and orientations of the fracture zones presume both shear and compressional displacements along faults. The presence of both thrust and strike-slip mechanisms of earthquakes in the Kachchh province may support the existence of such combined deformations leading to initiation of a new collision belt.

New insights and questions about the Meso-Cenozoic Tectonic evolution of Eastern Black Sea and Caucasus.

NASA Astrophysics Data System (ADS)

Sosson, Marc; Rolland, Yann; Hässig, Marc; Meijers, Maud; Smith, Brigitte; Muller, Carla; Adamia, Shota; Melkonian, Rafael; Kangarli, Talat; Sahakyan, Lilit; Sadradze, Nino; Avagyan, Ara; Galoyan, Ghazar; Alania, Victor; Enukidze, Onice; Sheremet-Korniyenko, Yevgeniya; Yegorova, Tamara

2014-05-01

Since last decade a lot of new field researches (supported by MEBE and DARIUS programmes) were carried out in order to clarify the tectonic evolution of the South Caucasus and Eastern Black Sea regions. A summary of these improvements are as following: 1. Evidence of only one suture zone in the Lesser Caucasus: the Sevan-Akera suture zone as the eastward continuity of the Izmir-Ankara-Erzincan one. 2. Timing and modalities of the Upper Cretaceous obduction process of the Sevan-Akera back-arc basin. 3. Paleolatitude reconstruction of the Taurides-Anatolides-South Armenia microplate (TASAM) since the Late Cretaceous 4. Paleocene to Miocene tectonic evolution of the collision zone between Eurasia and the TASAM. 5. Structures and propagation of the Lesser Caucasus and Greater Causasus foreland basins from Paleocene to Miocene. 6. Structures of the inverted Paleocene-Eocene Adjara-Trialeti basin of the Eurasian margin and timing of deformations from Lesser Caucasus to Greater Caucasus. 7. New stratigraphic data from the Crimea Mountain which argues for a Lower Cretaceous rifting of the Eastern Black Sea. According to aforementioned results and previous studies, this widespread zone (from the Eastern Black Sea to the Lesser Caucasus) appears act as a large puzzle of heterogeneous lithospheres (continental, oceanic, arc, back-arc basins) since the Early Cretaceous. This is probably why this area has differently reacted in time and space to the northward collision of the TASAM with Eurasia since the Late Cretaceous and then of Arabian plate since the Oligo-Miocene. It seems that some lithospheres which have cold mantellic behavior (especially the Black Sea) react as rigid blocks, while others with a continental origin, reheated by magmatism, (as the Taurides-Anatolides) were extruded to the west or bended as an orocline (as the Lesser Caucasus, the Pontides). This is why some main questions remain, are not solved and are still debated. 1. The continuity of main structures of the belt to the Est. The obduction front observed in the Lesser Caucasus is not well localized in NW Iran. This question is really a key point in the reconstruction of the obduction and collision processes which occurred in the northern branch of the Neotethys during the Late Cretaceous. 2. The changes in space and time of geodynamic processes responsible for the closure of the northern branch of Neotethys (subductions-obductions-collisions) and how these changes are related to the opening and inversion of back arc basins. 3. What processes are involved in the thickening of the crust, melting and magmatism all along the Caucasus region, and that support the present-day topography? What is the role of a possible fragmentation of the subducted slabs, or delamination of the continental lithosphere in the changes of topography? Is a mantle plume involved (as some geochemical data from Late Mesozoic and Cenozoic magmatic rocks indicate it)? What crust/mantle coupling supports the present day stress and strain field?

Features of the Caucasian segment of the Alpine-Himalayan-Indonesian Convergence Zone

NASA Astrophysics Data System (ADS)

Sharkov, E.

2012-04-01

The Caucasus Mountain System is a part of the Cenozoic Alpine-Himalayan-Indonesian Convergence Zone (AHICZ) which lasted throughout Eurasia from Western Mediterranean to Western Pacific. This belt has been formed after closure of the Mesozoic Tethys and is marked by mountains building processes, appearance of riftogenic structures, numerous late Cenozoic basaltic plateaus, and chain of often within-continental andesite-latite volcanic arcs, which trace suture zones of the continental plates collision. Caucasus Mountains are located in eastern part of the proper Alpine Zone in zone of Arabian-Eurasian syntaxis and appeared as a result of submeridional pressure which generated by oncoming moving of these plates. The Great Caucasus is represent the south border of the Eurasian plate, uplifted along the Main Caucasian Fault (Thrust). The latter is a part of super-regional deep-seated fault ranged from the Kopetdag through Caspian Sea, Caucasus and Crimea; very likely, that its further continuation is Tornquist-Teisseyre Zone. This superfault separates areas of Alpine convergence from Eurasian plate sensu stricto. The Caucasus occurred between Black and Caspian seas with passive margins and oceanic crust, covered by sediments of 10-15 km thick. Depressions of the seas form large "downfall", or caldrons which cut off pre-Pliocene structures of Caucasus and Kopetdag. These seas are, probably, small remnants of the Tethys which gradually shallowing in the Miocene (Zonenshain, Le Pichon, 1986). New essential deepening of the Black Sea and South-Caspian deep began in the Pliocene- Quaternary; it occurred simultaneously with uprising of Crimea and Caucasus, which were not marked in relief before (Grachev, 2000). Large positive isostatic anomaly beneath the Trans-Caucasian Transverse Uplift (TCTU) of the Great Caucasus and Lesser Caucasus, which stretch out to Arabian plate, occurred between "subsides" Black and especially Caspian seas with neutral to negative isostatic anomalies (Artemiev, 1973; Artemieva et al., 2006). We suggest that the positive anomaly considers with ascending of a mantle plume and .negative anomalies - with descending mantle flows on each its side (Sharkov, 2011). The main feature of this segment of the AHICZ is a presence of two late Cenozoic andesite-latite volcanic arcs: Anatolian-Caucasian and Caucasian-Elbursian, which jointed in area of TCTU. Such type of volcanism is also traced to the south practically through the whole zone of the syntaxis till to Van Lake area in Turkey. These volcanics are close to subduction-related magmas on their petrological and geochemical features, however, there are no clear evidences of the present-day subduction in the area of Neogene-Quaternary volcanism: crustal-level earthquakes predominated here (Gugunava, 1981; Sandvol et al., 2003). It suggests that such type of magmatism appeared as a result of interaction of a mantle plume head with continental crust under condition of continental plates collision (Lebedev et al., 2011). So, the Caucasus is an area of the present-day active interaction of deep-seated mantle processes with shallow lithosphere under conditions of the largest modern convergence zone.

Tectonics, Deep-Seated Structure and Recent Geodynamics of the Caucasus

NASA Astrophysics Data System (ADS)

Amanatashvili, I.; Adamia, Sh.; Lursmanashvili, N.; Sadradze, N.; Meskhia, V.; Koulakov, I.; Zabelina, I.; Jakovlev, A.

2012-04-01

The tectonics and deep-seated structure of the Caucasus are determined by its position between the still converging Eurasian and Africa-Arabian plates, within a wide zone of continental collision. The region in the Late Proterozoic - Early Cenozoic belonged to the Tethys Ocean and its Eurasian and Africa-Arabian margins. During Oligocene-Middle Miocene and Late Miocene-Quaternary time as a result of collision back-arc basins were inverted to form fold-thrust mountain belts and the Transcaucasian intermontane lowlands. The Caucasus is divided into platform and fold-thrust units, and forelands superimposed mainly on the rigid platform zones. The youngest structural units composed of Neogene-Quaternary continental volcanic formations of the Armenian and Javakheti highlands and extinct volcanoes of the Great Caucasus. As a result of detailed geophysical study of the gravity, magnetic, seismic, and thermal fields, the main features of the deep crustal structure of the Caucasus have been determined. Knowledge on the deep lithospheric structure of the Caucasus region is based on surface geology and deep and super deep drilling data combined with gravity, seismic, heat flow, and magnetic investigations. Close correlation between the geology and its deep-seated structures appears in the peculiarities of spatial distribution of gravitational, thermal and magnetic fields, particularly generally expressed in orientation of regional anomalies that is in good agreement with general tectonic structures. In this study we present two tomographic models derived for the region based on two different tomographic approaches. In the first case, we use the travel time data on regional seismicity recorded by networks located in Caucasus. The tomographic inversion is based on the LOTOS code which enables simultaneous determination of P and S velocity distributions and source locations. The obtained model covers the crustal and uppermost mantle depths. The second model, which is constructed for the upper mantle down to 700 km depth, is based on the data from the global ISC catalogue. We use travel times corresponding to rays which travel, at least partly, through the study volume. These data include rays from events in the study area recorded by worldwide stations, as well as teleseismic data recorded at regional stations. The computed seismic models reveal some deep traces of recent tectonic processes in the Caucasus: • For the 5, 15, 25 and 60-km-depth, there appears a clear coincidence between anomalous low velocities of P and S-waves with the fold-thrust mountainous belts of the Great and Lesser Caucasus, and also connection of high-velocity anomalies with the Trasncaucasian forelands. • Lowest-velocity anomalies are characteristic of the areas of Neogene-Quaternary volcanism of the Great and Lesser Caucasus. Areas with the lowest velocities of P- and S-waves coincide with the mountainous-folded belts, whereas the areas of high-velocity predominantly coincide with the platformal structures and forelands, as well as with basins of the Black and Caspian Seas. • Clear spatial correlation of the areas of lowest values of P- and S-velocities with the areas of Neogene-Quaternary volcanism occurs up to the depth of 150-200km that evidences location of magma sources within the crust - upper mantle - asthenosphere. • Tomographic data unambiguously confirm spatial unity of the main structures of the Caucasus and its basement, the location of the structures in situ in Late Cenozoic and connection of the volcanic constructions with their roots - magma chambers.

Karyotype characteristics, larval morphology and chromosomal polymorphism peculiarities of Glyptotendipes salinus Michailova, 1983 (Diptera, Chironomidae) from Tambukan Lake, Central Caucasus

PubMed Central

Karmokov, Mukhamed Kh.; Akkizov, Azamat Y.

2016-01-01

Abstract Data on the karyotype characteristics, larval morphology and features of chromosomal polymorphism of a population of Glyptotendipes salinus Michailova, 1983 (Diptera, Chironomidae) from Tambukan Lake (on the northern macroslope of the central Caucasus) are presented. It was found that diagnostic larval characters of Glyptotendipes salinus from Caucasus in general are similar to those described in previous studies, but with some significant differences. By some morphological characteristics Caucasian larvae appeared to be closer to Glyptotendipes barbipes than to ones provided for European larvae of Glyptotendipes salinus by Contreras-Lichtenberg (1999). Obtained morphological data make possible to conclude that Caucasian population of Glyptotendipes salinus can be a markedly diverged population of the species, probably even subspecies. In the Caucasian population 12 banding sequences were found: two in arms A, B, C, E, and G, and one in arms D and F. Eight of these are already known for this species, and four, salA2, salB2, salEX, and salG3, are described for the first time. Genetic distances between all the previously studied populations of Glyptotendipes salinus were measured using Nei criteria (1972). The population of the central Caucasus occupies a distinct position on the dendrogram compared with populations from Altai and Kazakhstan. All the obtained morphological and cytogenetic data can indicate the plausible relative isolation and complexity of the Caucasus from the viewpoint of microevolution. More researches are required in other parts of Caucasus and other geographically distant regions for more specific allegations. PMID:28123679

48 CFR 252.225-7000 - Buy American-Balance of Payments Program Certificate.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 225.1101(1)(ii), add the terms “South Caucasus/Central and South Asian (SC/CASA) state” and “South Caucasus/Central and South Asian (SC/CASA) state end product” in paragraph (a) and replace the phrase...

Tectonic stratification and seismicity of the accretionary prism of the Azerbaijani part of Greater Caucasus

NASA Astrophysics Data System (ADS)

Alizade, Akif; Kangarli, Talat; Aliyev, Fuad

2013-04-01

The Greater Caucasus has formed during last stage of the tectogenesis in a geodynamic condition of the lateral compression, peculiar to the zone pseudo-subduction interaction zone between Northern and Southern Caucasian continental microplates. Its present day structure formed as a result of horizontal movements of the different phases and sub-phases of Alpine tectogenesis (from late Cimmerian to Valakhian), and is generally regarded as zone where, along Zangi deformation, the insular arc formations of the Northern edge of South Caucasian microplate thrust under the Meso-Cenozoic substantial complex contained in the facials of marginal sea of Greater Caucasus. The last, in its turn, has been pushed beneath the North-Caucasus continental margin of the Scythian plate along Main Caucasus Thrust fault. Data collected from the territory of Azerbaijan and its' sector of the Caspian area stands for pseudo-subduction interaction of microplates which resulted in the tectonic stratification of the continental slope of Alpine formations, marginal sea and insular arc into different scale plates of south vergent combined into napping complexes. In the orogeny's present structure, tectonically stratified Alpine substantial complex of the marginal sea of Greater Caucasus bordered by Main Caucasus and Zangi thrusts, is represented by allochthonous south vergent accretionary prism in the front of first deformation with its' root buried under the southern border of Scythian plate. Allocated beneath mentioned prism, the autochthonous bedding is presented by Meso-Cenosoic complex of the Northern flank of the South-Caucasian miroplate, which is in its' turn crushed and lensed into southward shifted tectonic microplates gently overlapping the northern flank of Kura flexure along Ganykh-Ayrichay-Alyat thrust. Data of real-time GPS measurement of regional geodynamics indicates that pseudo-subduction of South Caucasian microplate under the North Caucasian microplate still continues during present stage of alpine tectogenesis. Among others, ongoing pseudo-subduction is indicated by data of regional seismicity which is irregularly distributed by depth (foci levels 2-6; 8-12; 17-22; 25-45 km). Horizontal and vertical seismic zoning is explained by Earth crust's block divisibility and tectonic stratification, within the structure of which the earthquake focuses are mainly confined to the crossing nodes of differently oriented ruptures, or to the planes of deep tectonic disruptions and lateral displacements along unstable contacts of the substantial complexes with various degree of competence. At present stage of tectogenesis, seismically most active are the structures of the northern flank of South Caucasian microplate, controlled by Ganyx-Ayrichay-Alyat deep thrust with "General Caucasus" spread in the west, and sub-meridian right-lateral strike slip zone of the Western Caspian fault in the east of Azerbaijani part of Greater Caucasus.

Tectonic stages in Southern Greater Caucasus and Adjara Trialeti belt in Georgia: new results on timing and structures of inverted basins

NASA Astrophysics Data System (ADS)

Candaux, Zoé; Sosson, Marc; Adamia, Shota; Sadradze, Nino; Alania, Victor; Enukidze, Onise; Chabukiani, Alexandre

2017-04-01

The Greater Caucasus mountain belt is the result of a long live subduction process and collisions of continental microplates (e.g. Dercourt et al., 1986; Barrier and Vrielynck, 2008). The northward subduction of Tethys beneath Eurasian plate initiated a back-arc basin: the Greater Caucasus basin (e.g. Adamia et al., 1981; Zonenshain and Le Pichon, 1986; Roberston et al., 1996; Stephenson and Schellart, 2010 among others). It took place from Middle Jurassic to Late Cretaceous. First compression stage started at the end of Cretaceous in the Lesser Caucasus (e.g. Rolland et al., 2010; Sosson et al. 2010, 2016) and Palaeocene-early Eocene in Crimean Mountains (northwestern continuation of the Greater Caucasus) (Sheremet et al., 2016). In southern Greater Caucasus (Georgian area) the age of deformation during the beginning of the collision is still a subject of debate: Oligocene-Lower Miocene at the frontal part (e.g. Adamia et al. 2010) or Eocene (Mosar et al., 2010). The deformation continues at Miocene, Pliocene and actual time in Kura and Rioni foreland basins (Forte et al., 2010; 2013; Mosar et al., 2010). The different timing is interpreted to be the result of the Taurides-Anatolides-South Armenian microcontinent collision with Eurasia, followed by the collision with Arabia. During the first collision, during Paleocene-Eocene, the so-called Adjara-Trialeti basin opened north of the volcanic arc. One question is if this local extension affect the timing of compression observed in the Greater Caucasus or not. In Georgia, we investigated new structural analyses, and considered unconformities and growth strata at the frontal part of deformations in Kura and Rioni forelands basins (in front of the Greater Caucasus). Our results evidence different tectonic stages and their timing. In Adjara-Trialeti, Kura and south Rioni basins deformation starts at Middle-Late Miocene. In northern Rioni basin Upper Cretaceous-Lower Paleocene compression is evidenced. The structures observed in the Greater Caucasus, forelands basins (Kura and Rioni basins) and in the Adjara-Trialeti belt are different: some are linked to thin-skinned tectonic deformations while some induces deformation at depth (thick-skinned tectonic). These observations outline the role of the inherited structures within the basement. The normal faults due to the previous extensional stages are reactivated as thrust during collision while detachment levels are observed in deposits not involved in the extensional stages. These observations bring out the importance of the chronology of the different tectonic stages to better understand the tectonic frame and geodynamic processes involved from the Early Cretaceous in this area and the role on the resulting structures.

From rifting to orogeny; using sediments to unlock the secrets of the Greater Caucasus

NASA Astrophysics Data System (ADS)

Vincent, Stephen; Guo, Li; Lavrishchev, Vladimir; Maynard, James; Harland, Melise

2017-04-01

The western Greater Caucasus formed by the tectonic inversion of the western strand of the Greater Caucasus Basin, a Mesozoic rift that opened at the southern margin of Laurasia. Facies analysis has identified fault-bounded regions of basinal, turbiditic and hemipelagic sediments. These are flanked by areas of marginal, shallow marine sediments to the north and south. Subsidence analysis derived from lithology, thickness and palaeowater depth data indicates that the main phase of rifting occurred during the Aalenian to Bajocian synchronous with that in the eastern Alborz and, possibly, the South Caspian Basin. Secondary episodes of subsidence during the late Tithonian to Berriasian and Hauterivian to early Aptian are tentatively linked to initial rifting within the western, and possibly eastern, Black Sea, and during the late Campanian to Danian to the opening of the eastern Black Sea. Initial uplift, subaerial exposure and sediment derivation from the western Greater Caucasus occurred at the Eocene-Oligocene transition. Oligocene and younger sediments on the southern margin of the former basin were derived from the inverting basin and uplifted parts of its northern margin, indicating that the western Greater Caucasus Basin had closed by this time. The previous rift flanks were converted to flexural basins that accumulated thick, typically hemipelagic and turbiditic sediments in the early, underfilled, stage of their development. A predominance of pollen representing a montane forest environment (dominated by Pinacean pollen) within these sediments suggests that the uplifting Caucasian hinterland had a paleoaltitude of around 2 km from Early Oligocene time. The closure of the western Greater Caucasus Basin and significant uplift of the range at c. 34 Ma is earlier than stated in many studies and needs to be incorporated into geodynamic models for the Arabia-Eurasia region.

Eemian and post-Eemian fluvial dynamics in the Lesser Caucasus

NASA Astrophysics Data System (ADS)

von Suchodoletz, Hans; Gärtner, Andreas; Zielhofer, Christoph; Faust, Dominik

2018-07-01

Mountain regions such as the Lesser Caucasus are a focus of ongoing environmental changes. To understand their future evolution, information about their former geomorphic and environmental dynamics is required. The former fluvial dynamics derived from fluvial sediment archives can offer such insights. However, the fluvial dynamics of the Lesser Caucasus since the Eemian interglacial have not been systematically investigated so far. Thus, we have studied late Pleistocene and Holocene sediments of several rivers originating from the central Lesser Caucasus. The studied rivers show a mostly coherent record of fluvial dynamics: Minor aggradation occurred during early Marine Isotope Stage (MIS) 5, incision during late MIS 5 or early MIS 4, intensive silty aggradation at least during late MIS 3, incision during early MIS 2, coarse-grained aggradation probably during some millenia until ca. 19 ka, and aggradation ca. 14-13 ka. Following incision around the Pleistocene/Holocene transition, aggradation resumed around 6.0, 3.4 - 2.0 and 0.5 - 0.15 cal. ka BP. Generally, periods of aggradation, incision and stability could be linked with regional climatic or anthropogenic influences on regional landscape stability and water availability. The fluvial dynamics of the central Lesser Caucasus mostly differed even between neighbouring regions, and only in cases of significant hemispheric climatic fluctuations as around 20 ka, during the Pleistocene/Holocene transition or the Little Ice Age, were similar over-regional fluvial patterns observed. This demonstrates the individual character of river systems especially in mountain regions such as the southern Caucasus with strong geoecological gradients. Thus, to understand the former landscape dynamics of mountain landscapes, investigations of fluvial sediment archives on a regional to sub-regional scale are necessary.

Revised age of late Neanderthal occupation and the end of the Middle Paleolithic in the northern Caucasus

PubMed Central

Pinhasi, Ron; Higham, Thomas F. G.; Golovanova, Liubov V.; Doronichev, Vladimir B.

2011-01-01

Advances in direct radiocarbon dating of Neanderthal and anatomically modern human (AMH) fossils and the development of archaeostratigraphic chronologies now allow refined regional models for Neanderthal–AMH coexistence. In addition, they allow us to explore the issue of late Neanderthal survival in regions of Western Eurasia located within early routes of AMH expansion such as the Caucasus. Here we report the direct radiocarbon (14C) dating of a late Neanderthal specimen from a Late Middle Paleolithic (LMP) layer in Mezmaiskaya Cave, northern Caucasus. Additionally, we provide a more accurate chronology for the timing of Neanderthal extinction in the region through a robust series of 16 ultrafiltered bone collagen radiocarbon dates from LMP layers and using Bayesian modeling to produce a boundary probability distribution function corresponding to the end of the LMP at Mezmaiskaya. The direct date of the fossil (39,700 ± 1,100 14C BP) is in good agreement with the probability distribution function, indicating at a high level of probability that Neanderthals did not survive at Mezmaiskaya Cave after 39 ka cal BP ("calendrical" age in kiloannum before present, based on IntCal09 calibration curve). This challenges previous claims for late Neanderthal survival in the northern Caucasus. We see striking and largely synchronous chronometric similarities between the Bayesian age modeling for the end of the LMP at Mezmaiskaya and chronometric data from Ortvale Klde for the end of the LMP in the southern Caucasus. Our results confirm the lack of reliably dated Neanderthal fossils younger than ∼40 ka cal BP in any other region of Western Eurasia, including the Caucasus. PMID:21555570

Upper Palaeolithic genomes reveal deep roots of modern Eurasians.

PubMed

Jones, Eppie R; Gonzalez-Fortes, Gloria; Connell, Sarah; Siska, Veronika; Eriksson, Anders; Martiniano, Rui; McLaughlin, Russell L; Gallego Llorente, Marcos; Cassidy, Lara M; Gamba, Cristina; Meshveliani, Tengiz; Bar-Yosef, Ofer; Müller, Werner; Belfer-Cohen, Anna; Matskevich, Zinovi; Jakeli, Nino; Higham, Thomas F G; Currat, Mathias; Lordkipanidze, David; Hofreiter, Michael; Manica, Andrea; Pinhasi, Ron; Bradley, Daniel G

2015-11-16

We extend the scope of European palaeogenomics by sequencing the genomes of Late Upper Palaeolithic (13,300 years old, 1.4-fold coverage) and Mesolithic (9,700 years old, 15.4-fold) males from western Georgia in the Caucasus and a Late Upper Palaeolithic (13,700 years old, 9.5-fold) male from Switzerland. While we detect Late Palaeolithic-Mesolithic genomic continuity in both regions, we find that Caucasus hunter-gatherers (CHG) belong to a distinct ancient clade that split from western hunter-gatherers ∼45 kya, shortly after the expansion of anatomically modern humans into Europe and from the ancestors of Neolithic farmers ∼25 kya, around the Last Glacial Maximum. CHG genomes significantly contributed to the Yamnaya steppe herders who migrated into Europe ∼3,000 BC, supporting a formative Caucasus influence on this important Early Bronze age culture. CHG left their imprint on modern populations from the Caucasus and also central and south Asia possibly marking the arrival of Indo-Aryan languages.

Upper Palaeolithic genomes reveal deep roots of modern Eurasians

PubMed Central

Jones, Eppie R.; Gonzalez-Fortes, Gloria; Connell, Sarah; Siska, Veronika; Eriksson, Anders; Martiniano, Rui; McLaughlin, Russell L.; Gallego Llorente, Marcos; Cassidy, Lara M.; Gamba, Cristina; Meshveliani, Tengiz; Bar-Yosef, Ofer; Müller, Werner; Belfer-Cohen, Anna; Matskevich, Zinovi; Jakeli, Nino; Higham, Thomas F. G.; Currat, Mathias; Lordkipanidze, David; Hofreiter, Michael; Manica, Andrea; Pinhasi, Ron; Bradley, Daniel G.

2015-01-01

We extend the scope of European palaeogenomics by sequencing the genomes of Late Upper Palaeolithic (13,300 years old, 1.4-fold coverage) and Mesolithic (9,700 years old, 15.4-fold) males from western Georgia in the Caucasus and a Late Upper Palaeolithic (13,700 years old, 9.5-fold) male from Switzerland. While we detect Late Palaeolithic–Mesolithic genomic continuity in both regions, we find that Caucasus hunter-gatherers (CHG) belong to a distinct ancient clade that split from western hunter-gatherers ∼45 kya, shortly after the expansion of anatomically modern humans into Europe and from the ancestors of Neolithic farmers ∼25 kya, around the Last Glacial Maximum. CHG genomes significantly contributed to the Yamnaya steppe herders who migrated into Europe ∼3,000 BC, supporting a formative Caucasus influence on this important Early Bronze age culture. CHG left their imprint on modern populations from the Caucasus and also central and south Asia possibly marking the arrival of Indo-Aryan languages. PMID:26567969

Mass balance and surface velocity reconstructions of two reference Caucasus glaciers

NASA Astrophysics Data System (ADS)

Rybak, Oleg; Kaminskaia, Mariia; Kutuzov, Stanislav; Lavrentiev, Ivan; Morozova, Polina; Popovnin, Victor; Rybak, Elena

2016-04-01

Total glacial volume of the Greater Caucasus exceeds 40 cubic km and its area exceeds 1 thousand square km. During the 20th century, mountain glaciers at the Greater Caucasus were continuously degrading. According to various estimates, their area reduced more than one-third and their volume almost by half. The process of degradation was accompanied by growing population and economical development on surrounding territories. In the 21st century under proceeding global warming, a tendency of shrinking of area and volume of glaciation is obviously expected to continue. Working out of strategy of sustainable economic development of the region is the main motivation for elaboration of predictions of glaciers' evolution in the changing environment. Growing demand of fresh water is the basic challenge for the local economy, and efficient planning of water resources is impossible without knowing future state of glaciation. Therefore our research aims at obtaining accurate evaluation of probable future change of the most prominent mountain glaciers of the Greater Caucasus in forthcoming decades and at studying impacts of changing characteristics of glaciation on the run-off in the area. Initially, we focus on two so-called reference glaciers - Marukh (Western Caucasus) and Djankuat (Central Caucasus). Intensive field observations on both of them have been conducted during the last half of the century and essential amount of detailed relevant information has been collected on their geometry change and on mass balance. Besides, meteorological measurements were episodically carried out directly on the glaciers providing enough data for correlation of the local weather conditions with the data from the closest meteorological stations. That is why studying of response of Marukh and Djankuat on the environmental change can be accurately verified, which is crucial for understanding mechanisms driving evolution of large glaciated area in the Caucasus. As the instrument of research, we employ a 3D higher order ice flow model coupled with an energy balance model. Both models were calibrated and validated using observational data. Test on prediction of glaciers' change until the end of the 21st century is carried out using climate change simulated by a GCM coupled with a regional climate model and employing a procedure of statistical downscaling.

Comment on "Relict Basin Closure and Crustal Shortening Budgets During Continental Collision: An Example From Caucasus Sediment Provenance" by Cowgill et al. (2016)

NASA Astrophysics Data System (ADS)

Vincent, Stephen J.; Saintot, Aline; Mosar, Jon; Okay, Aral I.; Nikishin, Anatoly M.

2018-03-01

The southern slope of the Greater Caucasus mountains is the site of a former rift basin. In order to explain shortening deficits, plate deceleration, and the 5 Ma reorganization of the Arabia-Eurasia collision zone Cowgill et al. (2016) proposed that this basin closed 5 Myrs ago. Within the western Greater Caucasus, at least, careful examination of sedimentological, provenance, and seismic data, however, supports an earlier 35 Ma basin closure age. Basin closure cannot therefore be the driving mechanism for the 5 Ma deceleration of the Arabian plate and reorganization of the Arabia-Eurasia collision zone.

48 CFR 252.225-7000 - Buy American Act-Buy American Statute-Balance of Payments Program Certificate.

Code of Federal Regulations, 2013 CFR

2013-10-01

... prescribed in 225.1101(1)(ii), add the terms “South Caucasus/Central and South Asian (SC/CASA) state” and “South Caucasus/Central and South Asian (SC/CASA) state end product” in paragraph (a) and replace the...

48 CFR 252.225-7000 - Buy American Act-Buy American Statute-Balance of Payments Program Certificate.

Code of Federal Regulations, 2012 CFR

2012-10-01

... prescribed in 225.1101(1)(ii), add the terms “South Caucasus/Central and South Asian (SC/CASA) state” and “South Caucasus/Central and South Asian (SC/CASA) state end product” in paragraph (a) and replace the...

Active geodynamics of the Caucasus/Caspian region educed from GPS, and seismic Observations

NASA Astrophysics Data System (ADS)

Gadirov (Kadirov), Fakhraddin; Floyd, Michael; Reilinger, Robert; Alizadeh, Akif; Guliyev, Ibrahim; Mammadov, Samir; Safarov, Rafig

2017-04-01

The geodynamic and earthquake activity in the Caucasus/Caspian region is due to the ongoing collision of the Arabian plate with Eurasia. The Caucasus and Caspian Sea are historically among the most seismically active regions on earth. These earthquakes have caused thousands of deaths and great economic distress. Future earthquakes in the Caucasus and Caspian Sea must be considered and planned for in order to limit their impact on the people, ecology, and infrastructure of the region. Within this plate tectonics context, we examine deformation of the Caucasus region and show that most crustal shortening in the collision zone is accommodated by the Greater Caucasus Fold-and-Thrust Belt (GCFTB) along the southern edge of the Greater Caucasus Mountains. The eastern GCFTB appears to bifurcate west of Baku, with one branch following the accurate geometry of the Greater Caucasus, turning towards the south and traversing the Neftchala Peninsula. A second branch may extend directly into the Caspian Sea south of Baku, likely connecting to the Central Caspian Seismic Zone. We model deformation in terms of a locked thrust fault that coincides in general with the main surface trace of the GCFTB. We consider two end-member models, each of which tests the likelihood of one or other of the branches being the dominant cause of observed deformation. Our models indicate that strain is actively accumulating on the fault along the 200 km segment of the fault west of Baku (approximately between longitudes 47-49°E). Parts of this segment of the fault broke in major earthquakes historically (1191, 1859, 1902) suggesting that significant future earthquakes (M 6-7) are likely on the central and western segment of the fault. We observe a similar deformation pattern across the eastern end of the GCFTB along a profile crossing the Kura Depression and Greater Caucasus Mountains in the vicinity of Baku. Along this eastern segment, a branch of the fault changes from a NW-SE striking thrust to an N-S oriented strike-slip fault. The similar deformation pattern along the eastern and central GCFTB segments raises the possibility that major earthquakes may also occur in eastern Azerbaijan. However, the eastern segment of the GCFTB has no record of large historic earthquakes, and is characterized by thick, highly saturated and over-pressured sediments within the Kura Depression and adjacent Caspian Basin that may inhibit elastic strain accumulation in favour of fault creep, and/or distributed faulting and folding. Thus, while our analyses suggest that large earthquakes are likely in central and western Azerbaijan, it is still uncertain whether significant earthquakes are also likely along the eastern segment, and on which structure. Ongoing and future focused studies of active deformation promise to shed further light on the tectonics and earthquake hazards in this highly populated and developed part of Azerbaijan.

Genome assemblies for 11 Yersinia pestis strains isolated in the Caucasus region

DOE PAGES

Zhgenti, Ekaterine; Johnson, Shannon L.; Davenport, Karen W.; ...

2015-09-17

Yersinia pestis, the causative agent of plague, is endemic to the Caucasus region but few reference strain genome sequences from that region are available. We present the improved draft or finished assembled genomes from 11 strains isolated in the nation of Georgia and surrounding countries.

48 CFR 252.225-7036 - Buy American-Free Trade Agreements-Balance of Payments Program.

Code of Federal Regulations, 2014 CFR

2014-10-01

... the basic clause: (a) “South Caucasus/Central and South Asian (SC/CASA) state” means Armenia... Caucasus/Central and South Asian (SC/CASA) state end product” means an article that— (i) Is wholly the... South Asian (SC/CASA) state means Armenia, Azerbaijan, Georgia, Kazakhstan, Kyrgyzstan, Pakistan...

48 CFR 252.225-7036 - Buy American-Free Trade Agreements-Balance of Payments Program.

Code of Federal Regulations, 2012 CFR

2012-10-01

... the basic clause: (a) South Caucasus/Central and South Asian (SC/CASA) state means Armenia, Azerbaijan... and South Asian (SC/CASA) state end product means an article that— (i) Is wholly the growth, product... Caucasus/Central and South Asian (SC/CASA) state means Armenia, Azerbaijan, Georgia, Kazakhstan, Kyrgyzstan...

48 CFR 252.225-7036 - Buy American-Free Trade Agreements-Balance of Payments Program.

Code of Federal Regulations, 2013 CFR

2013-10-01

... the basic clause: (a) “South Caucasus/Central and South Asian (SC/CASA) state” means Armenia... Caucasus/Central and South Asian (SC/CASA) state end product” means an article that— (i) Is wholly the... South Asian (SC/CASA) state means Armenia, Azerbaijan, Georgia, Kazakhstan, Kyrgyzstan, Pakistan...

48 CFR 225.7704 - Acquisitions of products and services from South Caucasus/Central and South Asian (SC/CASA) state...

Code of Federal Regulations, 2013 CFR

2013-10-01

... 48 Federal Acquisition Regulations System 3 2013-10-01 2013-10-01 false Acquisitions of products and services from South Caucasus/Central and South Asian (SC/CASA) state in support of operations in... South Asian (SC/CASA) state in support of operations in Afghanistan. ...

48 CFR 225.7704 - Acquisitions of products and services from South Caucasus/Central and South Asian (SC/CASA) state...

Code of Federal Regulations, 2014 CFR

2014-10-01

... 48 Federal Acquisition Regulations System 3 2014-10-01 2014-10-01 false Acquisitions of products and services from South Caucasus/Central and South Asian (SC/CASA) state in support of operations in... South Asian (SC/CASA) state in support of operations in Afghanistan. ...

New data on Callovian (Middle Jurassic) belemnites and palynomorphs from the Northern Caucasus, southwest Russia

NASA Astrophysics Data System (ADS)

Dzyuba, Oksana S.; Goryacheva, Anna A.; Ruban, Dmitry A.; Gnezdilova, Victoria V.; Zayats, Pavel P.

2016-03-01

Palaeontological data on the Caucasus are highly important for large-scale stratigraphical and palaeobiogeographical assessment of the northern Tethyan margin, but this information is often scarce and not available in English. Field studies in the Northern Caucasus have now permitted to amass some new data. Two belemnite species are described from the stratotype section of the Kamennomostskaja Formation (Callovian, Middle Jurassic) near the town of Kamennomostskij in Adygeja (Northern Caucasus). These are Belemnopsis subhastata (von Zieten, 1831) and Rhopaloteuthis ominosa Gustomesov, 1968. The latter is a rare species, and the present find allows new insights into its taxonomy. A palyno-logical analysis of the belemnite-bearing sample was carried out, and a diverse assemblage of dinocysts, acritarchs and prasinophytes, plus pollen and spores recognised. The most abundant palynomorphs are Micrhystridium and Classopollis. Data on belemnites coupled with those on palynomorphs indicate the early Callovian age of the sample level. This interpretation differs slightly from previous conclusions based on ammonites and dinocysts. If this age is correct, the degree of condensation of Callovian deposits in the section studied was lesser than previously assumed.

Mountainous terrain and violent conflict in the post-Soviet Caucasus.

NASA Astrophysics Data System (ADS)

Witmer, F. D. W.; Linke, A. M.; Holland, E.; O'Loughlin, J.

2015-12-01

What are the connections between mountainous terrain and violent conflict in the post-Soviet Caucasus? Political science and international relations research often use simplistic metrics to characterize terrain and its relation to conflict. We examine linkages between environmental conditions and conflict using fine-resolution spatially disaggregated data for violent events occurring in five wars in the broader Caucasus region: between the Russian state and separatists in Chechnya and the neighboring republics (1999-2002); the Russian state and Islamists in the North Caucasus (2002-2015); between Armenians and Azerbaijanis in Nagorno-Karabakh (1990-2015); and between Georgia and separatists in South Ossetia (1991-2008) and Abkhazia (1992-2008). For environmental conditions, we consider land use, elevation, and slope to identify profiles of violence intensity within each of the five cases. Data include forest cover derived from Landsat imagery, slope data calculated from a digital elevation model, and land cover derived from MODIS imagery. The Landsat imagery provide consistent 30 meter information on percent forest cover across the multiple study regions. We use GIS (buffers around conflict points) to create categorical summary statistics. The "operational costs of context" vary dramatically across regions within the study area and by the actor who initiates subsets of violent events. Our empirical focus is on Russia's south and the neighboring countries of the South Caucasus but we leverage comparisons between the five wars to generalize outward to other world regions and to contribute to research on conflict propensity in regions of rugged and mountainous terrain.

Lithospheric Velocity Structure of the Anatolain plateau-Caucasus-Caspian Regions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gok, R; Mellors, R J; Sandvol, E

Anatolian Plateau-Caucasus-Caspian region is an area of complex structure accompanied by large variations in seismic wave velocities. Despite the complexity of the region little is known about the detailed lithospheric structure. Using data from 29 new broadband seismic stations in the region, a unified velocity structure is developed using teleseismic receiver functions and surface waves. Love and Rayleigh surface waves dispersion curves have been derived from event-based analysis and ambient-noise correlation. We jointly inverted the receiver functions with the surface wave dispersion curves to determine absolute shear wave velocity and important discontinuities such as sedimentary layer, Moho, lithospheric-asthenospheric boundary. Wemore » combined these new station results with Eastern Turkey Seismic Experiment results (29 stations). Caspian Sea and Kura basin underlained by one of the thickest sediments in the world. Therefore, short-period surface waves are observed to be very slow. The strong crustal multiples in receiver functions and the slow velocities in upper crust indicate the presence of thick sedimentary unit (up to 20 km). Crustal thickness varies from 34 to 52 km in the region. The thickest crust is in Lesser Caucasus and the thinnest is in the Arabian Plate. The lithospheric mantle in the Greater Caucasus and the Kura depression is faster than the Anatolian Plateau and Lesser Caucasus. This possibly indicates the presence of cold lithosphere. The lower crust is slowest in the northeastern part of the Anatolian Plateau where Holocene volcanoes are located.« less

Seismic databases and earthquake catalogue of the Caucasus

NASA Astrophysics Data System (ADS)

Godoladze, Tea; Javakhishvili, Zurab; Tvaradze, Nino; Tumanova, Nino; Jorjiashvili, Nato; Gok, Rengen

2016-04-01

The Caucasus has a documented historical catalog stretching back to the beginning of the Christian era. Most of the largest historical earthquakes prior to the 19th century are assumed to have occurred on active faults of the Greater Caucasus. Important earthquakes include the Samtskhe earthquake of 1283, Ms~7.0, Io=9; Lechkhumi-Svaneti earthquake of 1350, Ms~7.0, Io=9; and the Alaverdi(earthquake of 1742, Ms~6.8, Io=9. Two significant historical earthquakes that may have occurred within the Javakheti plateau in the Lesser Caucasus are the Tmogvi earthquake of 1088, Ms~6.5, Io=9 and the Akhalkalaki earthquake of 1899, Ms~6.3, Io =8-9. Large earthquakes that occurred in the Caucasus within the period of instrumental observation are: Gori 1920; Tabatskuri 1940; Chkhalta 1963; 1991 Ms=7.0 Racha earthquake, the largest event ever recorded in the region; the 1992 M=6.5 Barisakho earthquake; Ms=6.9 Spitak, Armenia earthquake (100 km south of Tbilisi), which killed over 50,000 people in Armenia. Recently, permanent broadband stations have been deployed across the region as part of various national networks (Georgia (~25 stations), Azerbaijan (~35 stations), Armenia (~14 stations)). The data from the last 10 years of observation provides an opportunity to perform modern, fundamental scientific investigations. A catalog of all instrumentally recorded earthquakes has been compiled by the IES (Institute of Earth Sciences, Ilia State University). The catalog consists of more then 80,000 events. Together with our colleagues from Armenia, Azerbaijan and Turkey the database for the Caucasus seismic events was compiled. We tried to improve locations of the events and calculate Moment magnitudes for the events more than magnitude 4 estimate in order to obtain unified magnitude catalogue of the region. The results will serve as the input for the Seismic hazard assessment for the region.

Tree-ring based reconstruction of spring hydroclimate variability in the Caucasus

NASA Astrophysics Data System (ADS)

Martin-Benito, Dario; Köse, Nesibe; Güner, Tuncay; Pederson, Neil

2015-04-01

The Caucasus region has been identified as one of the most prominent biodiversity hotspots in the world. The region experiences recurrent droughts that not only affect natural vegetation but also the agriculturally-based economies in the Caucasus. Across northeastern Turkey and the Caucasus region, instrumental records providing information on climate variability are generally scarce. Thus the magnitude and frequency of past droughts in this biologically important region are less known. Additionally, despite the increase of climate reconstructions in the past decades for many parts of Europe and Asia, relatively little work has been done to understand hydroclimate variability in the Caucasus region. Nearly all efforts in the region have focused on the Mediterranean part of Turkey and the Middle East region. We developed new tree-ring width chronologies from different elevation sites in northeastern Turkey with the goal to reconstruct annually-resolved estimates of temperature and hydroclimate across the region. We developed the first reconstruction of spring hydroclimate variability for the Caucasus and the southeastern Black Sea Region since 1750 CE using a nested procedure. Despite the high mean annual precipitation in the region, our reconstruction accounted for over 45% of May-June precipitation variability from 1925 to 2006. We observed no evidence of a decrease in spring precipitation during the recent decades. However, we do see a decrease in precipitation variability over the last 75 years with respect to previous periods that, at this time, does not appear to be related to sample replication. Although our reconstructed precipitation shows important similarities with previous work from Mediterranean and northern Turkey, we find distinct drought periods are also evident suggesting a wider range of climate dynamics in the broader Black Sea region than what has been previously identified. Distinct episodes of drought at the larger scales could have important implications for the dynamics of ecosystems prior to and after the 20th century.

Cavernicolous Arrhopalites abchasicus sp. nov. (Collembola: Symphypleona: Arrhopalitidae) from the West Caucasus with a key to the World species of the genus.

PubMed

Vargovitsh, Robert S

2013-01-01

A new troglobiont species of Collembola, Arrhopalites abchasicus sp. nov., from Psyrtskha Cave in Novy Afon (West Caucasus, Abkhazia) is described. Subdivision of the genus Arrhopalites on diversus, caecus and harveyi groups of species is proposed and identification key to the World species is provided.

48 CFR 225.7704 - Acquisitions of products and services from South Caucasus/Central and South Asian (SC/CASA) state...

Code of Federal Regulations, 2011 CFR

2011-10-01

... 48 Federal Acquisition Regulations System 3 2011-10-01 2011-10-01 false Acquisitions of products and services from South Caucasus/Central and South Asian (SC/CASA) state in support of operations in... and South Asian (SC/CASA) state in support of operations in Afghanistan. ...

48 CFR 225.7704 - Acquisitions of products and services from South Caucasus/Central and South Asian (SC/CASA) state...

Code of Federal Regulations, 2012 CFR

2012-10-01

... 48 Federal Acquisition Regulations System 3 2012-10-01 2012-10-01 false Acquisitions of products and services from South Caucasus/Central and South Asian (SC/CASA) state in support of operations in... and South Asian (SC/CASA) state in support of operations in Afghanistan. ...

New Mitochondrial and Nuclear Evidences Support Recent Demographic Expansion and an Atypical Phylogeographic Pattern in the Spittlebug Philaenus spumarius (Hemiptera, Aphrophoridae)

PubMed Central

Rodrigues, Ana S. B.; Silva, Sara E.; Marabuto, Eduardo; Silva, Diogo N.; Wilson, Mike R.; Thompson, Vinton; Yurtsever, Selçuk; Halkka, Antti; Borges, Paulo A. V.; Quartau, José A.; Paulo, Octávio S.; Seabra, Sofia G.

2014-01-01

Philaenus spumarius is a widespread insect species in the Holarctic region. Here, by focusing on the mtDNA gene COI but also using the COII and Cyt b genes and the nuclear gene EF-1α, we tried to explain how and when its current biogeographic pattern evolved by providing time estimates of the main demographic and evolutionary events and investigating its colonization patterns in and out of Eurasia. Evidence of recent divergence and expansion events at less than 0.5 Ma ago indicate that climate fluctuations in the Mid-Late Pleistocene were important in shaping the current phylogeographic pattern of the species. Data support a first split and differentiation of P. spumarius into two main mitochondrial lineages: the “western”, in the Mediterranean region and the “eastern”, in Anatolia/Caucasus. It also supports a following differentiation of the “western” lineage into two sub-lineages: the “western-Mediterranean”, in Iberia and the “eastern-Mediterranean” in the Balkans. The recent pattern seems to result from postglacial range expansion from Iberia and Caucasus/Anatolia, thus not following one of the four common paradigms. Unexpected patterns of recent gene-flow events between Mediterranean peninsulas, a close relationship between Iberia and North Africa, as well as high levels of genetic diversity being maintained in northern Europe were found. The mitochondrial pattern does not exactly match to the nuclear pattern suggesting that the current biogeographic pattern of P. spumarius may be the result of both secondary admixture and incomplete lineage sorting. The hypothesis of recent colonization of North America from both western and northern Europe is corroborated by our data and probably resulted from accidental human translocations. A probable British origin for the populations of the Azores and New Zealand was revealed, however, for the Azores the distribution of populations in high altitude native forests is somewhat puzzling and may imply a natural colonization of the archipelago. PMID:24892429

America’s Collision Course with the Caucasus: Is Military Intervention Inevitable?

DTIC Science & Technology

2001-05-01

50 INTERNET RESEARCH (links valid 05 MAR 2001...Department of State, Office of the Spokesman. 4 Oct 2000 < http://secretary.state.gov/www/policy_remarks/2000/001004_wolf_btcpipeline.html> INTERNET ... RESEARCH (links valid 05 MAR 2001) AzeriNews.com—Azerbaijan News <www.Azerbaijan.com> Azerbaijan International Magazine <azer.com> Caucasus Watch.Com

Bringing wisents back to the Caucasus Mountains: 70 years of a grand mission

USGS Publications Warehouse

Sipko, Taras; Trepet, Sergei; Gogan, Peter J.; Mizin, Ivan

2010-01-01

We describe the history of mountain wisent restoration in the north-west Caucasus region. We review information on wisent during the 18th and 19th centuries, contemporary regional development and reasons for wisent extirpation. We emphasize the key role of the Kuban Hunting Reserve as a main factor in preserving wisent in this region between 1888 and 1909. The article provides information on the fate of three known Caucasus wisent and their impact on the common pedigree of EuropeanWisent. The importance of scientist’s efforts to conserve the survived wisent in Europe in 1920th and international cooperation is underscored. The issues of hybridization between wisent and American bison and the possible influence of hybridization events on the and taxonomic status of contemporary mountain wisent are discussed. We describes in detail the history of wisent reintroduced to the Caucasus, the establishment of seasonal migration patterns and adaptation to the mountainous region and poaching pressures. Mountain wisent reached a maximum number of 1500 animals in 1991. We review the significant role of the Caucasian Biosphere Reserve and its zoologists in conservation of mountain wisent in its historical area and current research objectives with the support of German conservation organizations.

Explaining Differences in Sport Participation Rates among Young Adults: Evidence from the South Caucasus

ERIC Educational Resources Information Center

Birchwood, Diane; Roberts, Ken; Pollock, Gary

2008-01-01

This paper presents and discusses evidence about the sport careers of representative samples of 31-37 year olds from the capital city and a comparator region in each of the three South Caucasus countries--Armenia, Azerbaijan and Georgia. This is one of the few surveys to measure sport participation that allows change over time at the aggregate and…

Immigrants from Russia, Ukraine and the Caucasus Region: Differential Drug Use, Infectious Disease, and Related Outcomes

ERIC Educational Resources Information Center

Isralowitz, Richard; Reznik, Alexander; Rawson, Richard A.; Hasson, Albert

2009-01-01

This study examined drug use patterns, HIV/AIDS, and related outcomes among former Soviet Union (FSU) immigrants from Russia, Ukraine and the Caucasus mountain region in Israel who reported heroin use. A total of 253 FSU heroin users were interviewed from 2002 to 2007 as part of a large drug use surveillance study in Israel. Individuals were…

Earthquake Catalogue of the Caucasus

NASA Astrophysics Data System (ADS)

Godoladze, T.; Gok, R.; Tvaradze, N.; Tumanova, N.; Gunia, I.; Onur, T.

2016-12-01

The Caucasus has a documented historical catalog stretching back to the beginning of the Christian era. Most of the largest historical earthquakes prior to the 19th century are assumed to have occurred on active faults of the Greater Caucasus. Important earthquakes include the Samtskhe earthquake of 1283 (Ms˜7.0, Io=9); Lechkhumi-Svaneti earthquake of 1350 (Ms˜7.0, Io=9); and the Alaverdi earthquake of 1742 (Ms˜6.8, Io=9). Two significant historical earthquakes that may have occurred within the Javakheti plateau in the Lesser Caucasus are the Tmogvi earthquake of 1088 (Ms˜6.5, Io=9) and the Akhalkalaki earthquake of 1899 (Ms˜6.3, Io =8-9). Large earthquakes that occurred in the Caucasus within the period of instrumental observation are: Gori 1920; Tabatskuri 1940; Chkhalta 1963; Racha earthquake of 1991 (Ms=7.0), is the largest event ever recorded in the region; Barisakho earthquake of 1992 (M=6.5); Spitak earthquake of 1988 (Ms=6.9, 100 km south of Tbilisi), which killed over 50,000 people in Armenia. Recently, permanent broadband stations have been deployed across the region as part of the various national networks (Georgia (˜25 stations), Azerbaijan (˜35 stations), Armenia (˜14 stations)). The data from the last 10 years of observation provides an opportunity to perform modern, fundamental scientific investigations. In order to improve seismic data quality a catalog of all instrumentally recorded earthquakes has been compiled by the IES (Institute of Earth Sciences/NSMC, Ilia State University) in the framework of regional joint project (Armenia, Azerbaijan, Georgia, Turkey, USA) "Probabilistic Seismic Hazard Assessment (PSHA) in the Caucasus. The catalogue consists of more then 80,000 events. First arrivals of each earthquake of Mw>=4.0 have been carefully examined. To reduce calculation errors, we corrected arrivals from the seismic records. We improved locations of the events and recalculate Moment magnitudes in order to obtain unified magnitude catalogue of the region. The results will serve as the input for the Seismic hazard assessment for the region

Seismic databases of The Caucasus

NASA Astrophysics Data System (ADS)

Gunia, I.; Sokhadze, G.; Mikava, D.; Tvaradze, N.; Godoladze, T.

2012-12-01

The Caucasus is one of the active segments of the Alpine-Himalayan collision belt. The region needs continues seismic monitoring systems for better understanding of tectonic processes going in the region. Seismic Monitoring Center of Georgia (Ilia State University) is operating the digital seismic network of the country and is also collecting and exchanging data with neighboring countries. The main focus of our study was to create seismic database which is well organized, easily reachable and is convenient for scientists to use. The seismological database includes the information about more than 100 000 earthquakes from the whole Caucasus. We have to mention that it includes data from analog and digital seismic networks. The first analog seismic station in Georgia was installed in 1899 in the Caucasus in Tbilisi city. The number of analog seismic stations was increasing during next decades and in 1980s about 100 analog stations were operated all over the region. From 1992 due to political and economical situation the number of stations has been decreased and in 2002 just two analog equipments was operated. New digital seismic network was developed in Georgia since 2003. The number of digital seismic stations was increasing and in current days there are more than 25 digital stations operating in the country. The database includes the detailed information about all equipments installed on seismic stations. Database is available online. That will make convenient interface for seismic data exchange data between Caucasus neighboring countries. It also makes easier both the seismic data processing and transferring them to the database and decreases the operator's mistakes during the routine work. The database was created using the followings: php, MySql, Javascript, Ajax, GMT, Gmap, Hypoinverse.

Relict basin closure accommodates continental convergence with minimal crustal shortening or deceleration of plate motion as inferred from detrital zircon provenance in the Caucasus

NASA Astrophysics Data System (ADS)

Cowgill, E.; Forte, A. M.; Niemi, N. A.; Avdeev, B.; Tye, A. R.; Trexler, C. C.; Javakhishvili, Z.; Elashvili, M.; Godoladze, T.

2016-12-01

Comparison of plate convergence with the timing and magnitude of upper-crustal shortening in collisional orogens indicates both shortening deficits (200-1700 km) and significant (30-40%) plate deceleration during collision, the cause(s) for which remain debated. The Greater Caucasus Mountains, which result from post-collisional Cenozoic closure of a relict Mesozoic back-arc basin on the northern margin of the Arabia-Eurasia collision zone, help reconcile these debates. Here we use U-Pb detrital zircon provenance data and the regional geology of the Caucasus to investigate the width of the now-consumed Mesozoic back-arc basin and its closure history. The provenance data record distinct southern and northern provenance domains that persisted until at least the Miocene; maximum basin width was likely 350-400 km. We propose that closure of the back-arc basin initiated at 35 Ma, coincident with initial (soft) Arabia-Eurasia collision along the Bitlis suture, eventually leading to 5 Ma (hard) collision between the Lesser Caucasus arc and the Scythian platform to form the Greater Caucasus Mountains. Final basin closure triggered deceleration of plate convergence and tectonic reorganization throughout the collision. Post-collisional subduction of such small (500-1000 km wide) relict ocean basins can account for both shortening deficits and delays in plate deceleration by accommodating convergence via subduction/underthrusting, although such shortening is easily missed if it occurs along structures hidden within flysch/slate belts. Relict-basin closure is likely typical early in continental collision at the end of a Wilson cycle due to the irregularity of colliding margins and extensive back-arc basin development during closure of long-lived ocean basins.

Self-Inflicted Wounds: Russia’s Failed Chechen and North Caucasus Policy

DTIC Science & Technology

2012-04-22

caused spillover violence in the North Caucasus,19 and have resulted in reprisal attacks against Russian targets.20 The Kremlin’s response has been...camps.34 The ongoing instability and violence in the region has increased unemployment, and created fertile ground for insurgent recruitment.35...conflict led to widespread lawlessness in Chechnya and the spillover of violence into the surrounding region, 45 resulting in a second Chechen war in

The influence of carbonates in parent rocks on the biological properties of mountain soils of the Northwest Caucasus region

NASA Astrophysics Data System (ADS)

Kazeev, K. Sh.; Kutrovskii, M. A.; Dadenko, E. V.; Vezdeneeva, L. S.; Kolesnikov, S. I.; Val'kov, V. F.

2012-03-01

The biological activity of different subtypes of soddy-calcareous soils (rendzinas) of the Northwest Caucasus region was studied. In the Novorossiisk-Abrau-Dyurso region (dry subtropics), typical soddy-calcareous soils with the high content of carbonates predominate; in the more humid conditions of the Lagonaki Plateau (Republic of Adygeya), leached soddy-calcareous soils carbonate-free down to the parent rock are spread. The number of microarthropods, the populations of fungi and bacteria, and the enzyme activity (catalase, dehydrogenase, and invertase) testify that the biological activity of these soils significantly differs. In the typical soddy-calcareous soils of the dry subtropics, the content of carbonates does not affect the characteristics mentioned; in the more humid conditions of the West Caucasus region, the presence of carbonates in the parent rocks intensifies the biological activity of the soddy-calcareous soils.

Initiation and evolution of the Arabia-Eurasia collision in the Caucasus region constrained by detrital zircon geochronology

NASA Astrophysics Data System (ADS)

Tye, A. R.; Niemi, N. A.

2016-12-01

The Greater Caucasus (GC) mountain range is composed of thrust sheets of Paleozoic (Pz) - Mesozoic (Mz) flysch. Crystalline basement is exposed in the western part of the range, but not in the eastern. Detrital zircon ages from Eocene - recent foreland strata to the south of the western GC in Georgia suggest sediment sourcing from GC basement or Pz strata since Eocene time, requiring significant exhumation prior to or coincident with the onset of Arabia-Eurasia collision 30 Ma. We sampled foreland basin sedimentary rocks and modern river sands whose catchment areas together span the potential source rocks exposed in the western Greater Caucasus (GC) in Georgia. We find that GC basement rocks and lower Pz strata contain a diagnostic 450 Ma zircon population that is absent from the upper Pz and Mz sedimentary strata that are exposed throughout most of the range. These 450 Ma zircons are from an unknown source with an age distinct from the Hercynian ( 300 Ma) and Pan-African ( 600 Ma) orogens. Despite their absence in late Pz and Mz strata, the 450 Ma zircons are prevalent in Eocene - recent foreland basin deposits, whose ages were determined biostratigraphically [1]. Paleocurrent directions also indicate a GC source for Eocene strata [2], necessitating early Cenozoic exposure of GC basement or Pz strata. Exposing GC basement or Pz strata during Eocene time requires erosional removal of >3500 m of Mesozoic and late Paleozoic strata [1]. The detrital zircon age observations suggest that erosional removal of these strata took place prior to the initiation of the Arabia-Eurasia collision at 30 Ma and well before the ongoing episode of rapid GC exhumation and erosion from 5 Ma - present. Foreland basin detrital zircon ages also reveal a lack of input from Late Cretaceous to Paleogene volcanism of the Adjara-Trialet zone. This finding is consistent with the existence of a Paleogene ocean basin between the Greater Caucasus and Lesser Caucasus wide enough to prevent transport of sand sized sediments from one side to the other. References[1] Gamkrelidze, P. D., & I. R. Kakhazdze (1959), K-38-VII, Min. Geol. Min. Prot. USSR. [2] Vincent, S. J., et al. (2007). Terra Nova, 19(2), 160-166. [3] Avdeev, B., & Niemi, N. A. (2011). Tectonics, 30(2), TC2009[4] Nalivkin, D. V. (1976). Geologic Map of the Caucasus, 1:500000.

The North Caucasus Insurgency: Dead or Alive

DTIC Science & Technology

2017-02-01

Shvedov, a liberal Rus- sian journalist and expert on the North Caucasus, stat- ed at the time that “the number of bombings , terrorist attacks and murders...crowded subway stations in Mos- cow were targeted by suicide bombers, resulting in 3 the deaths of 40 civilians. In January 2011, a bomb ex- ploded in...Moscow’s busy Domodedovo International Airport, leaving 37 dead. In 2013, three suicide bomb - ings on October 21, December 29, and December 30, shook

Isotope and chemical age of the Greater Caucasus basement metamorphic rocks

NASA Astrophysics Data System (ADS)

Konilov, A. N.; Somin, M. L.; Mukhanova, A. A.

2009-04-01

It is widely accepted that metamorphic basement of the Greater Caucasus is essentially Proterozoic [i.e. Gamkrelidze & Shengelia, 2005 ]. New results of geochronological study, mainly on magmatic zircon, contradict this opinion [Somin, 2007; Somin et al., 2007a, b, c and references therein]. To precise age of metamorphism we tried to apply CHIME method on monazite [Suzuki, Adachi, 1991]. The facility consists of Tescan SEM VEGA II xmu equipped with EDS Energy 400 and WDS Wave 500 from Oxford Instruments. This system and analytical protocol for monazite analysis are close to described by Slagstad [2006]. Samples of three metamorphic units were used with purpose to investigate their PT conditions and chemical composition of accessory monazite, xenotime and zircon. In the Blyb Complex Ky-bearing St-Grt-Bt schist was studied. Temperature calculated using Grt-St and Grt-Bt thermometers are 550-600 oC at 10 kb. Because xenotime absence and very low Y2O3 content in monazite, temperature determination on Mnz thermometer was impossible. Isochron chemical age of monazite is 288±24 Ma. In the Gondary Complex the Sil-bearing Grt-Bt gneiss was studied. Temperature calculated using Grt-Bt thermometer and Grt-Pl-Sil-Qtz geobarometer correspond to 610 oC at 4 kb. Monazite thermometer [Pyle et al., 2001] indicates temperature range 533-640 oC for three samples. Monazite chemical age is 303±31 Ma, zircon of leucosome yields SHRIMP age 321-288 Ma. In the Makera Complex the And-Bt-Ms and Grt-Bt-Ms metapelites were examinated. Temperature calculated using Grt-Bt thermometer and Grt-Pl-And-Qtz geobarometer correspond to 500 oC at 2,5 kb. Monazite thermometer indicates average temperatures 293-433-447 oC. Two isochrones correspond to 239±28 Ma and 282±19 Ma. Our results of monazite dating are close to the U-Pb zircon data although not similar being some younger. Therefore conclusion on Precambrian metamorphic events in the studied complexes of the Greater Caucasus is erroneous. These complexes independently of baric type seem to be formed roughly synchronously during Variscan epoch. References: Gamkrelidze I.P., Shengelia D.M. ( 2005).The Precambrian-Paleozoic Regional Metamorphism, Granitoid Magmatism, and Geodynamics of the Caucasus. M: Nauchnyi Mir [in Russian]. Pyle J.M., Frank S. Spear F.S. et al. (2001). Monazite-Xenotime-Garnet Equilibrium in Metapelites and a New Monazite-Garnet Thermometer. Journal of Petrology, , 42, 2083-2107. Slagstad T. (2006).Chemical (U-Th-Pb) dating of monazite: Analytical protocol for a LEO 1450VP scanning electron microscope and examples from Rogaland and Finnmark, Norway. Norges geologiske undersøkelse Bulletin, 446, 11-18. Somin M.L. (2007a). Pre-Alpine basement of the Greater Caucasus: main features. In: Alpine history of the Greater Caucasus (Yu.G. Leonovб Ed.). GEOS. Moscow. P.15-38. Somin M.L., Lepekhina E.N., Konilov A.N. ( 2007b). Age of the High-Temperature Gneiss Core of the Central Caucasus. Doklady Earth Sciences, 415, 690-694. Somin M.L., Levchenkov O.A., Kotov A.B. et al. (2007c). The Paleozoic Age of High-Pressure Metamorphic Rocks in the Dakhov Salient, North-Western Caucasus: Results of U-Pb Geochronological Investigations. Doklady Earth Sciences, 416, 1018-1021. Suzuki K., Adachi M. (1991). Precambrian provenance and Silurian metamorphism of the Tsunosava paragneiss in South Kitakami terrane, northeast Japan, revealed by the chemical Th-U-total Pb isochron ages of monazite, zircon and xenotime. Journal of Geochemistry, 25, 357-376.

Seismological and Geodynamic Monitoring Network in the "javakheti" Test Zone in the Southern Caucasus

NASA Astrophysics Data System (ADS)

Arakelyan, A.; Babayan, H.; Karakhanyan, A.; Durgaryan, R.; Basilaia, G.; Sokhadze, G.; Bidzinashvili, G.

2012-12-01

The Javakheti Highland located in the border region between Armenia and Georgia (sharing a border with Turkey) is an area in the Southern Caucasus of young Holocene-Quaternary volcanism and a region with convergence of a number of active faults. Issues related to the geometry, kinematics and slip-rate of these faults and assessment of their seismic hazard remain unclear in part due to the fragmentary nature of the studies carried out soley within the borders of each of the countries as opposed to region wide. In the frame of the ISTC A-1418 Project "Open network of scientific Centers for mitigation risk of natural hazards in the Southern Caucasus and Central Asia" the Javakheti Highland was selected as a trans-border test-zone. This designation allowed for the expansion and upgrading of the seismological and geodynamic monitoring networks under the auspices of several international projects (ISTC CSP-053 Project "Development of Communication System for seismic hazard situations in the Southern Caucasus and Central Asia", NATO SfP- 983284 Project "Caucasus Seismic Emergency Response") as well as through joint research programs with the National Taiwan University and Institute of Earth Sciences (IES, Taiwan), Universite Montpellier II (France) and Ecole et Observatoire des Sciences de la Terre-Université de Strasbourg (France). Studies of geodynamic processes, and seismicity of the region and their interaction have been carried out utilizing the newly established seismological and geodynamic monitoring networks and have served as a basis for the study of the geologic and tectonic structure . Upgrading and expansion of seismological and geodynamic networks required urgent solutions to the following tasks: Introduction of efficient online systems for information acquisition, accumulation and transmission (including sattelite systems) from permanent and temporary installed stations, Adoption of international standards for organization and management of databases in GIS format, Utilization of data archiving system working in intrnationally adopted formats and data exchange systems for communication with other international and national centers.

Georgia-Armenia Transboarder seismicity studies

NASA Astrophysics Data System (ADS)

Godoladze, T.; Tvaradze, N.; Javakishvili, Z.; Elashvili, M.; Durgaryan, R.; Arakelyan, A.; Gevorgyan, M.

2012-12-01

In the presented study we performed Comprehensive seismic analyses for the Armenian-Georgian transboarder active seismic fault starting on Armenian territory, cutting the state boarder and having possibly northern termination on Adjara-Triealeti frontal structure in Georgia. In the scope of International projects: ISTC A-1418 "Open network of scientific Centers for mitigation risk of natural hazards in the Southern Caucasus and Central Asia" and NATO SfP- 983284 Project "Caucasus Seismic Emergency Response" in Akhalkalaki (Georgia) seismic center, Regional Summer school trainings and intensive filed investigations were conducted. Main goal was multidisciplinary study of the Javakheti fault structure and better understanding seismicity of the area. Young scientists from Turkey, Armenia, Azerbaijan and Georgia were participated in the deployment of temporal seismic network in order to monitor seisimity on the Javakheti highland and particularly delineate fault scarf and identify active seismic structures. In the scope of international collaboration the common seismic database has been created in the southern Caucasus and collected data from the field works is available now online. Javakheti highland, which is located in the central part of the Caucasus, belongs to the structure of the lesser Caucasus and represents a history of neotectonic volcanism existed in the area. Jasvakheti highland is seismicalu active region devastating from several severe earthquakes(1088, 1283, 1899…). Hypocenters located during analogue network were highly scattered and did not describe real pattern of seismicity of the highland. We relocated hypocenters of the region and improved local velocity model. The hypocenters derived from recently deployed local seismic network in the Javakheti highland, clearly identified seismically active structures. Fault plane solutions of analogue data of the Soviet times have been carefully analyzed and examined. Moment tensor inversion were preformed for the recent moderate size earthquakes and the results are in an agreement with paleo-trenching data showing normal fault mechanism on the south and strake slip on the northern edge of the fault. Local seismic tomography of Javakheti area has been performed in order to improve 3D structure of the region.

Model-based calculations of surface mass balance of mountain glaciers for the purpose of water consumption planning: focus on Djankuat Glacier (Central Caucasus)

NASA Astrophysics Data System (ADS)

Rybak, O. O.; Rybak, E. A.

2018-01-01

Mountain glaciers act as regulators of run-off in the summer period, which is very crucial for economy especially in dynamically developing regions with rapidly growing population, such as Central Asia or the Northern Caucasus in Russia. In overall, glaciers stabilize water consumption in comparatively arid areas and provide conditions for sustainable development of the economy in mountainous regions and in the surrounding territories. A proper prediction of the glacial run-off is required to elaborate strategies of the regional development. This goal can be achieved by implementation of mathematical modeling methods into planning methodologies. In the paper, we consider one of the first steps in glacier dynamical modeling - surface mass balance simulation. We focus on the Djankuat Glacier in the Central Caucasus, where regular observations have been conducted during the last fifty years providing an exceptional opportunity to calibrate and to validate a mathematical model.

The eastern Black Sea-Caucasus region during the Cretaceous: New evidence to constrain its tectonic evolution

NASA Astrophysics Data System (ADS)

Sosson, Marc; Stephenson, Randell; Sheremet, Yevgeniya; Rolland, Yann; Adamia, Shota; Melkonian, Rafael; Kangarli, Talat; Yegorova, Tamara; Avagyan, Ara; Galoyan, Ghazar; Danelian, Taniel; Hässig, Marc; Meijers, Maud; Müller, Carla; Sahakyan, Lilit; Sadradze, Nino; Alania, Victor; Enukidze, Onice; Mosar, Jon

2016-01-01

We report new observations in the eastern Black Sea-Caucasus region that allow reconstructing the evolution of the Neotethys in the Cretaceous. At that time, the Neotethys oceanic plate was subducting northward below the continental Eurasia plate. Based on the analysis of the obducted ophiolites that crop out throughout Lesser Caucasus and East Anatolides, we show that a spreading center (AESA basin) existed within the Neotethys, between Middle Jurassic and Early Cretaceous. Later, the spreading center was carried into the subduction with the Neotethys plate. We argue that the subduction of the spreading center opened a slab window that allowed asthenospheric material to move upward, in effect thermally and mechanically weakening the otherwise strong Eurasia upper plate. The local weakness zone favored the opening of the Black Sea back-arc basins. Later, in the Late Cretaceous, the AESA basin obducted onto the Taurides-Anatolides-South Armenia Microplate (TASAM), which then collided with Eurasia along a single suture zone (AESA suture).

When contact counts: Intergroup contact on business and intermarriage resistance in the Caucasus region.

PubMed

Gurrentz, Benjamin T; Finke, Roger

2017-03-01

Intergroup contact theory has been empirically supported in a variety of social contexts, but few samples have been drawn from rapidly developing nations undergoing severe political and sociocultural conflict. Using 2012 Caucasus Barometer data from the three nations of the South Caucasus - Armenia, Azerbaijan and Georgia - we test the effect of interreligious contact on various forms of out-group resistance in a region of the world that is both historically and presently marked with severe religious and ethnic conflict. Additionally, we take into account self-selection effects using propensity score matching. Results overwhelmingly support intergroup contact theory in all three countries, but objections toward intermarriage still remain high for treated groups. In addition, there exist significant differences based on the out-group studied, with the contact effects being the strongest for groups posing little religio-cultural or organized threat. Weaker contact effects, though, appear less related to threat and more contextual/out-group specific. Copyright © 2016 Elsevier Inc. All rights reserved.

Laws of distribution of the snow cover on the greater Caucasus (Soviet Union)

NASA Technical Reports Server (NTRS)

Gurtovaya, Y. Y.; Sulakvelidze, G. K.; Yashina, A. V.

1985-01-01

The laws of the distribution of the snow cover on the mountains of the greater Caucasus are discussed. It is shown that an extremely unequal distribution of the snow cover is caused by the complex orography of this territory, the diversity of climatic conditions and by the difference in altitude. Regions of constant, variable and unstable snow cover are distinguished because of the clearly marked division into altitude layers, each of which is characterized by climatic differences in the nature of the snow accumulation.

Peculiarity of Seismicity in the Balakend-Zagatal Region, Azerbaijan

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ismail-Zadeh, Tahir T.

2006-03-23

The study of seismicity in the Balakend-Zagatal region demonstrates a temporal correlation of small events in the region with the moderate events in Caucasus for the time interval of 1980 to 1990. It is shown that the processes resulting in deformation and tectonic movements of main structural elements of the Caucasus region are internal and are not related to large-scale tectonic processes. A week dependence of the regional movements on the large-scale motion of the lithospheric plates and microplates is apparent from another geological and geodetic data as well.

[From the history of organization of medical care to population in cities of the north-eastern Caucasus in XIX--early XX centuries].

PubMed

2013-01-01

The article deals with becoming of urban health care in the region of the north-eastern Caucasus in XIX--early XX centuries. The characteristics and stages of development of medical care in cities appeared grew from military fortifications and fortresses in the meddle of XIX century are established. The first curative institutions in cities were military hospitals and infirmaries. Later on appeared clinics of philanthropic societies and even later on hospitals functioning on municipality funds and private curative establishments.

Early Pleistocene climate cycles in continental deposits of the Lesser Caucasus of Armenia inferred from palynology, magnetostratigraphy, and 40Ar/39Ar dating

NASA Astrophysics Data System (ADS)

Joannin, Sebastien; Cornée, Jean-Jacques; Münch, Philippe; Fornari, Michel; Krijgsman, Wout; Nahapetyan, Samuel; Gabrielyan, Ivan; Ollivier, Vincent; Roiron, Paul; Chataignier, Christine

2010-05-01

The Lesser Caucasus in Armenia is an active volcanic and tectonic zone which resulted from the collision of the Arabian and the Eurasian plates since Neogene times. The During Quaternary, Lesser Caucasus was uplifted (0.3 mm/yr; Mitchell and Westaway, 1999) and experienced extensional tectonics times. Large lakes developed in graben structures. The diatomitic sequences of the Shamb paleo-lake (South Armenia) offer a rare opportunity to give new insights of Western Asia paleo-climate. Based on macroflora analysis, Bruch and Gabrielyan (2002) proposed a cooling and drying general climate trend through Pleistocene times in relation with a general uplift of the chain. Several questions have to be answer for this poorly investigated region. Did the climate record humid glacials and arid interglacials as suggested northward in Kazakhstan? What are the vegetation and climate responses to orbital parameters and to the monsoon? Moreover the lesser Caucasus is known as the entrance way used by the first hominids in Eurasia during Pleistocene time. How was the environment at this time? We present an integrated palynological, 40Ar/39Ar isotopic and magnetostratigraphic study for the most complete section (Joannin et al., in press). 40Ar/39Ar dating of two volcaniclastic layers provided ages of 1.24 ± 0.03 and 1.16 ± 0.02 Ma. Magnetostratigraphic data show that the entire Shamb section is of reversed polarity which correlates with part of the Matuyama period (1.785-1.070 Ma). Pollen assemblages and macroremains diversity revealed an alternation of glacial and interglacial phases that are compared with climate changes inferred from the global isotopic curve. The Shamb section ranges from approximately 1.300 to 1.080 Ma in age (marine isotopic stages 40 to 31). The vegetation of the Lesser Caucasus developed in a mosaic pattern in a Pleistocene continental, mostly arid climate, similar to the present-day climate. The vegetation changes record a dominant climate response to the obliquity orbital parameter. The influence of precession could not be established from the Shamb data. Pollen and macroflora both indicate that glacial periods were cold and dry and that interglacials were warm with local humidity. The early Pleistocene climatic model for Western Asia is thus similar to the climatic model for the Mediterranean area. Bruch, A., Gabrielyan, I.G., 2002. Quantitative data of the Neogene climatic development in Armenia and Nakhichevan. Acta Universitatis Carolinae - Geologica 46, 41-48. Joannin, S., Cornée, J.J., Münch, P., Fornari, M., Vasiliev, J., Krijgsman, W., Nahapetyan, S., Gabrielyan, Y., Ollivier, V., Roiron, P., Chataignier, C. In press. Early Pleistocene climatic cycles in continental deposits of the Lesser Caucasus of Armenia inferred from palynology, magnetostratigraphy, and 40Ar/39Ar dating. Earth and Planetary Science Letters. Mitchell, J., Westaway, R., 1999. Chronology of Neogene and Quaternary uplift and magmatism in the Caucasus: constraints from K-Ar dating of volcanism in Armenia. Tectonophysics 304, 157-186.

Late Quaternary river channel migrations of the Kura River in Transcaucasia - tectonic versus climatic causes

NASA Astrophysics Data System (ADS)

von Suchodoletz, Hans; Gärtner, Andreas; Hoth, Silvan; Umlauft, Josefine; Godoladze, Tea; Faust, Dominik

2015-04-01

Large-scale river channel migrations either in the form of avulsions or combing, i.e. progressive lateral migrations, are global phenomena during the Late Quaternary. Such channel migrations were triggered by tectonics, climate change, human activity or a combination of those factors. River channel migrations have the potential to cause significant human and economic losses. Thus, a more thorough knowledge about underlying causes and process rates is essential. Furthermore, such studies will elucidate the sensitivity or robustness of rivers to different external and internal forcing-agents, i.e. they help to identify the dominant drivers of regional landscape evolution. The Caucasus region is part of the active collision zone between the Africa-Arabian and the Eurasian plates, and is characterized by high current tectonic activity. Furthermore, significant environmental changes took place during the Late Quaternary, i.e. the shrinking or even disappearance of glaciers in the Greater and Lesser Caucasus or fundamental changes of the vegetation cover varying between woodland and grassland-dominated vegetation. The Kura River is the main gaining stream of the Transcaucasian Depression located between the Greater Caucasus Mountains in the north and the Lesser Caucasus Mountains in the south, and receives several tributaries from both mountain ranges. This study focusses on the middle course of the Kura River in eastern Georgia, SE of the city of Tbilisi. Integration of fluvial geomorphology, geochronology, heavy mineral analyses and seismo-tectonic analyses demonstrates that this part of the Kura River underwent large-scale channel migrations up to >10 km during Late Pleistocene and Holocene. It is interpreted that these movements followed both tectonic and climatic triggers: Whereas SW-ward migrations were caused by tectonic uplift in and SW-directed advance of the Kura fold and thrust belt as part of the Greater Caucasus, NE-ward migrations occurred during cold glacial periods with intensive sediment supply and strong vertical sedimentation of tributaries originating from a westerly direction. Thus, the middle course of the Kura River shows a dynamic equilibrium between competing tectonic and climatic processes.

[Inversion polymorphism of the nonbiting midges Camptochironomus pallidivittatus Edwards, 1929 (Diptera, Chironomidae) from populations of the Lower Volga region and Central Caucasus].

PubMed

Polukonova, N V; Karmokov, M Kh; Shaternikov, A N

2015-02-01

The karyotype of Camptochironomus pallidivittatus Edwards, 1929 (Diptera, Chironomidae) from five populations of the Lower Volga region and Central Caucasus (the northern macroslope) has been studied. In populations of S. pallidivittatus from the Central Caucasus, 11 banding sequences (BS) were found; one sequence, pal B10, was new to the species. In the Saratov population, 11 BS were also found, three of which were new for the species-pal A3, pal B11, and pal B12. The banding sequences detected for the first time have not yet been found in other parts of the habitat of this species and may be endemic to these regions. In the studied populations ofS. pallidivittatus, banding sequences were found that were nonstandard but fixed in the karyotype. This is indicative of some degree of chromosomal divergence. These banding sequences include pal A2.2 in arm A and pal B10.10 in arm B in the Central Caucasus region, as well as pal B2.2 and pal G2.2 in the Lower Volga region. Arms A, B, D, and G in the Central Caucasian populations and A, B, and D in the Saratov oblast were polymorphic. The composition of heterozygous sequences between populations from different regions coincided only in arm D (pal D 1.2). In arms A and B, the set of heterozygous BS was different: pal A1.2 and pal B1.10 sequences were found in the Central Caucasian populations, and pal A1.3 and B11.12 were found in Saratov oblast. The number of genotypic combinations of S. pallidivittatus was higher in the Central Caucasus region, whereas the number of zygotic combinations was higher in the Saratov population. The percentage of heterozygous larvae in the Central Caucasian populations varied from 20 to 80, whereas all individuals in the Saratov population had heterozygous inversions. Zygotic combinations of larvae in all the studied populations were different.

Mass balance of Djankuat Glacier, Central Caucasus: observations, modeling and prediction

NASA Astrophysics Data System (ADS)

Rybak, Oleg; Mariia, Kaminskaia; Stanislav, Kutuzov; Ivan, Lavrentiev; Polina, Morozova; Victor, Popovnin; Elena, Rybak

2017-04-01

Djankuat is a typical valley glacier on the northern slope of the main Caucasus chain. Its present day area is approximately 2.5 square km with the characteristic ice thickness of several tens of meters. As well as other glaciers in the region, Djankuat has been shrinking during the last several decades, its cumulative mass balance in 1968-2016 was equal to -13.6 m w.e. In general, Caucasus' glaciers lost approximately one-third of their area and half of the volume. Prediction of further deradation of glaciers in changing environment is a challenging task because rivers fed by glacier melt water provide from 40 to 70% of the total river run-off in the adjacent piedmont territories. Growing demand in fresh water is rather critical for the local economy development and for growing population, motivating elaboration of an effitient instrument for evaluation and forecasting of the glaciation in the Greater Caucasus. Unfortunately, systematic observations are sparse limiting possibilities for proper model development for the most of the glaciers. Under these circumstances, we have to rely on the models developed for the few well-studied ones, like Djankuat, which is probably one of the most explored glaciers in the world. Accumulation and ablation rates have been observed here systematically and uninterruptedly since mid 60-ies using dense stake network. Together with the mass balance components, changes in flow velocity, ice thickness and geometry were regularly evaluated. During the last several ablation seasons, direct meteorological observations were carried out using an AMS. Long series of meteorological observations at the nearest weather station allow making assessment of the glacier response to climate change in the second half of the 20th century. Abundant observation data gave us the opportunity to elaborate, calibrate and validate an efficient mathematical model of surface mass balance of a typical glacier in the region. Since many glaciers in the Caucasus are partially covered with debris, the model allows distinguishing between clear and debris-covered surfaces when describing heat exchange of the glacier with the atmosphere. Evaluation of the future state of the glacier is carried out using a hybrid downscaling technique.

The roles of ecology, behaviour and effective population size in the evolution of a community.

PubMed

Hung, Chih-Ming; Drovetski, Sergei V; Zink, Robert M

2017-07-01

Organismal traits such as ecological specialization and migratory behaviour may affect colonization potential, population persistence and degree of isolation, factors that determine the composition and genetic structure of communities. However, studies focusing on community assembly rarely consider these factors jointly. We sequenced 16 nuclear genes and one mitochondrial gene from Caucasian and European populations of 30 forest-dwelling avian species that represent diverse ecological (specialist-generalist) and behavioural (migratory-resident) backgrounds. We tested the effects of organismal traits on population divergence and community assembly in the Caucasus forest, a continental mountain island setting. We found that (i) there is no concordance in divergence times between the Caucasus forest bird populations and their European counterparts, (ii) habitat specialists tend to be more divergent than generalists and (iii) residents tend to be more divergent than migrants. Thus, specialists and residents contribute to the high level of endemism of Caucasus forest avifauna more than do generalists and migrants. Patterns of genetic differentiation are better explained by differences in effective population sizes, an often overlooked factor in comparative studies of phylogeography and speciation, than by divergence times or levels of gene flow. Our results suggest that the Caucasus forest avifauna was assembled through time via dispersal and/or multiple vicariant events, rather than originating simultaneously via a single isolation event. Our study is one of the first multilocus, multispecies analyses revealing how ecological and migratory traits impact the evolutionary history of community formation on a continental island. © 2017 John Wiley & Sons Ltd.

[Variability in Leptotrombidium europaeum and two new related chigger mite species (Acari: Trombiculidae) from Caucasus].

PubMed

Stekol'nikov, A A

2004-01-01

Two new chigger mite species closely related to Leptotrombidium europaeum (Daniel et Brelih, 1959) are described from small mammals collected in Caucasus and Transcaucasia. L. alanicum sp. n. differs from L. europaeum in having shorter legs (TaIII = 61-81, Ip = 734-927 versus 72-90, and 855-1017), shorter scutal and idiosomal setae (D(min) = = 30-45, D(max) = 48-67, H = 59, PL = 58 versus 40-52, 54-69, 64, 63), slightly smaller scutum (AP = 25, SD = 47, PW = 89 versus 28, 50, 91), and more numerous idiosomal setae (87 versus 81). L. montanum sp. n. differs from L. europaeum in having more numerous idiosomal setae (102 versus 81), longer scutal and idiosomal setae (AM = 61, AL = 44, H = 68, D(max) = 66 versus 56, 41, 64, 62), thicker legs (TaW = 19 versus 18), and broader scutum (PW = 95 versus 91). Exact identification of both new species is possible only using classification functions constructed by means of discriminant analysis. These three Leptotrombidium species expose sympatric distribution in Daghestan (Eastern Caucasus). L. alanicum and L. montanum also occurred together in Krasnodar Territory (Western Caucasus). Each of these species includes a number of local geographical forms precisely distinguished from each other. Morphometric differences between L. alanicum and L. montanum agree with eco-geographical rules being previously found in chigger mites from other genera. However, differences between local forms of these species show other tendencies directed controversially in part. Therefore it is probable that interspecific differences in this case correspond to the variability which took place in the process of speciation.

[Results of usage of temporary prosthetics in cases of combat injuries of extremities].

PubMed

Samokhvalov, I M; Zavrazhanov, A A; Kornilov, E A

2006-09-01

The comparative analyzes of the results of usage of temporary prosthetics (TP) of injured main arteries during the war in Afghanistan (1979-1989) and counter-terrorist operations in the Northern Caucasus (1994-1996, 1999-2002) has been carried out. The development of new models of temporary prosthetics of vessels has been experimentally substantiated. In Afghanistan the two-staged usage of TP was made along with the amputation of extremities in 35,1% of cases and in the Northern Caucasus - in 15,0%. The reason for that was the considerable reduction of terms of evacuation of wounded. The average terms of presence of TP in the arteries in Afghanistan were 26,2+/-4,0 hours and in the Northern Caucasus - 18,1+/-3,4 hours. During a series of experiments on comparative testing of efficiency of three types of TP it was determined that prosthetics made of armored silicone (10,1+/-0,6 hours)and, especially made of enlarged micropored polytetraftoraethylen (11,5 +/-0,6 hours) are thrombosed slower comparing to polyclorvinil tube from the blood transfusion system (7,9+/-0,7 hours).

The Role of NATO and the EU in Resolving Frozen Conflicts

DTIC Science & Technology

2006-12-01

Bodansky, “ Tinder  Box in the Caucasus,” Defense & Foreign Affairs Strategic Policy  28, No. 4 (April 2000): 5.  46 made a welcome contrast to Yeltsin...Yossef. “ Tinder  Box in the Caucasus.” Defense & Foreign Affairs  Strategic Policy 28, No. 4 (April 2000): 2‐13.  Brilmayer, Lea. “Secession and Self

No evidence from genome-wide data of a Khazar origin for the Ashkenazi Jews.

PubMed

Behar, Doron M; Metspalu, Mait; Baran, Yael; Kopelman, Naama M; Yunusbayev, Bayazit; Gladstein, Ariella; Tzur, Shay; Sahakyan, Hovhannes; Bahmanimehr, Ardeshir; Yepiskoposyan, Levon; Tambets, Kristina; Khusnutdinova, Elza K; Kushniarevich, Alena; Balanovsky, Oleg; Balanovsky, Elena; Kovacevic, Lejla; Marjanovic, Damir; Mihailov, Evelin; Kouvatsi, Anastasia; Triantaphyllidis, Costas; King, Roy J; Semino, Ornella; Torroni, Antonio; Hammer, Michael F; Metspalu, Ene; Skorecki, Karl; Rosset, Saharon; Halperin, Eran; Villems, Richard; Rosenberg, Noah A

2013-12-01

The origin and history of the Ashkenazi Jewish population have long been of great interest, and advances in high-throughput genetic analysis have recently provided a new approach for investigating these topics. We and others have argued on the basis of genome-wide data that the Ashkenazi Jewish population derives its ancestry from a combination of sources tracing to both Europe and the Middle East. It has been claimed, however, through a reanalysis of some of our data, that a large part of the ancestry of the Ashkenazi population originates with the Khazars, a Turkic-speaking group that lived to the north of the Caucasus region ~1,000 years ago. Because the Khazar population has left no obvious modern descendants that could enable a clear test for a contribution to Ashkenazi Jewish ancestry, the Khazar hypothesis has been difficult to examine using genetics. Furthermore, because only limited genetic data have been available from the Caucasus region, and because these data have been concentrated in populations that are genetically close to populations from the Middle East, the attribution of any signal of Ashkenazi-Caucasus genetic similarity to Khazar ancestry rather than shared ancestral Middle Eastern ancestry has been problematic. Here, through integration of genotypes from newly collected samples with data from several of our past studies, we have assembled the largest data set available to date for assessment of Ashkenazi Jewish genetic origins. This data set contains genome-wide single-nucleotide polymorphisms in 1,774 samples from 106 Jewish and non-Jewish populations that span the possible regions of potential Ashkenazi ancestry: Europe, the Middle East, and the region historically associated with the Khazar Khaganate. The data set includes 261 samples from 15 populations from the Caucasus region and the region directly to its north, samples that have not previously been included alongside Ashkenazi Jewish samples in genomic studies. Employing a variety of standard techniques for the analysis of population-genetic structure, we found that Ashkenazi Jews share the greatest genetic ancestry with other Jewish populations and, among non-Jewish populations, with groups from Europe and the Middle East. No particular similarity of Ashkenazi Jews to populations from the Caucasus is evident, particularly populations that most closely represent the Khazar region. Thus, analysis of Ashkenazi Jews together with a large sample from the region of the Khazar Khaganate corroborates the earlier results that Ashkenazi Jews derive their ancestry primarily from populations of the Middle East and Europe, that they possess considerable shared ancestry with other Jewish populations, and that there is no indication of a significant genetic contribution either from within or from north of the Caucasus region. Copyright © 2014 Wayne State University Press, Detroit, Michigan 48201-1309.

Impact of Earthquake Preperation Process On Hydrodeformation Field Evolution In The Caucasus

NASA Astrophysics Data System (ADS)

Melikadze, G.; Aliev, A.; Bendukidze, G.; Biagi, P. F.; Garalov, B.; Mirianashvili, V.

The paper studies relation between geodeformation regime variations of underground water observed in boreholes and deformation processes in the Earth crust, asso- ciated with formation of earthquakes with M=3 and higher. Monitoring of hydro- geodeformation field (HGDF) has been carried out thanks to the on-purpose gen- eral network of Armenia, Azerbaijan, Georgia and Russia. The wells are uniformly distributed throughout the Caucasus and cover all principal geological blocks of the region. The paper deals with results associated with several earthquakes occured in Georgia and one in Azerbaijan. As the network comprises boreholes of different depths, varying from 250 m down to 3,500 m, preliminary calibration of the boreholes involved was carried out, based on evaluation of the water level variation due to known Earth tide effect. This was necessary for sensitivity evaluation and normalization of hydro-dynamic signals. Obtained data have been processed by means of spectral anal- ysis to dissect background field of disturbances from the valid signal. The processed data covered the period of 1991-1993 comprising the following 4 strong earthquakes of the Caucasus, namely in: Racha (1991, M=6.9), Java (1991, M=6.2), Barisakho (1992, M=6.5) and Talish (1993, M=5.6). Formation of the compression zone in the east Caucasus and that of extension in the western Georgia and north Caucasus was observed 7 months prior to Racha quake. Boundary between the above 2 zones passed along the known submeridional fault. The area where maximal gradient was observed, coincided with the joint of deep faults and appeared to be the place for origination of the earthquake. After the quake occurred, the zone of maximal gradient started to mi- grate towards East and residual deformations in HGDF have outlined source first of Java quake (on 15.06.1991), than that of Barisakho (on 23.10.1992) and Talish (on 2.10.1993) ones. Thus, HGDF indicated migration of the deformation field along the slope of the Greater Caucasus 7 months prior the earthquake. After these reassuring results we increased density of the network, that made possible to observe migration process along Achara-Trialeti fault system prior smaller earthquakes as well (Achara, on 10.02.1996, M=2.9; Guria, on 28.05.1996, M=4.3; Javakheti, 28.05.1997, M=3.3; 1 Khashmi, 28.11.97, M=5.1). Directly prior a quake, when deformation reached its crit- ical value, the natural regime characteristic in each observation point was disturbed. Period of perturbation (varying from several hours up to several days) was dependant on the magnitude of earthquake. Disturbances showed themselves within the area of maximal stress, sometimes at a distance from the source; e.g. in case of Racha earth- quake perturbations were observed first at Lisi point (on 15.03.1991) at a distance of 190 km from earthquake source, though within the area of maximal compression, and only 25 days later at Oni point (on 10.04.1991) located in the source zone. This can be considered as one of the examples of long-distance manifestation of hydrodynamic precoursers. The obtained results verify capability of the existing HGDF observation network for tracing M=3 and higher earthquake precursors in the Caucasus, and in case of modernization of the network will be capable for middle-term prediction of large earthquakes. 2

The Caspian megabasin: tectonics and evolution

NASA Astrophysics Data System (ADS)

Khain, V. E.; Bogdanov, N. A.

2003-04-01

The Caspian Sea occupies at longitudinally elongated depression, superimposed in the latest Miocene on different structural units, oriented in WNW-ESE direction and belonging to the southern edge of the East European Craton and to the Mediterranean mobile belt. The Caspian megabasin comprises three basins - Northern, Middle and Southern with different age of basement and sedimentary fill, structural style and recent tectonics. The evolution of the whole region could be followed from Neoproterozoic onwards. At that epoch, an oceanic basin-Prototethys appeared after the breakup of Rodinia between Baltica and Gondwana. Its volcano-sedimentary sequence outcrops in the Greater Caucasus and Dzirula massif in Transcaucasia. After the Baikalian (=Cadomian/Panafrican) orogeny the central and southern part of the region was cratonised and formed the northern rim of Gondwana, presumably separated from Baltica by a relic of Prototethys. In Ordovician two branches of the Paleotethys crossed the region - the northern passed through the Greater Caucasus, the southern through Talesh; they were separated by the Transcaucasian microcontinent. At the southern edge of Baltica the Donets-Karpinsky Ridge rift system was formed in mid-Devonian. The northern branch of the Paleotethys was severely deformed, intruded by granites and metamorphosed by the Hercynian orogeny; only a remnant marine basin persisted to the south of the orogen. It was deformed in its tour, along with the southern-Paleotethys branch by the Eocimmerian orogeny which also caused the final inversion of the Donets-Karpinsky rift system. After these events the Fore-Caucasus region became the young Scythian platform - part of the Eurasian continent. In the Early Jurassic rifting opened the Greater Caucasus basin, marginal in respect to the Neotethys, one of the main branch of which passed through the Lesser Caucasus and probably along the southern border of the Alborz Range, separating it from the Iranian microcontinent. A volcanic arc developed in the Middle Jurassic on the Transcaucasian microcontinent over a zone of subduction of the Tethyan crust. In the Latest Miocene, under the impulse of the Afro-Arabian plate moving north, orogeny began in the Greater and Lesser Caucasus and Alborz. At that time the South Caspian basin was definitely formed and filled in the Oligocene-Miocene by a thick clayey Maikop series. The Middle Caspian basin developed over the Terek-Caspian foredeep of the Greater Caucasus and the adjacent Scythian-Turanian platform. The North Caspian basin is much older and existed already in the Devonian and till the Early Permian was a deep-water basin, bordered in the south by carbonate platforms. In mid-Permian time it was the site of salt accumulation and later of shelf or paralic sedimentation. At the end of Miocene, the advance of the Arabian Plate toward the southern border of Eurasia led to the transversal uplift of the Caucasian isthmus and the separation of the Caspian megabasin from the Black Sea. In Early Pliocene the North and Middle Caspian became dry land, and the Volga river pursued its course toward thee South Caspian, which was filled by a thick sandy-clayey formation - main productive hydrocarbon reservoir of Azerbaijan and Turkmenistan. Clayey diapirs and mud volcanoes were formed there and the South Caspian microplate with oceanic type crust experienced subduction to the north under the Apsheron-Balkhan sill. This work was supported by RFBR (grants 99-05-64009 and 02-05-64392).

Large scale obduction of preserved oceanic crust: linking the Lesser Caucasus and NE Anatolian ophiolites and implications for the formation of the Lesser Caucasus-Pontides Arc

NASA Astrophysics Data System (ADS)

Hassig, Marc; Rolland, Yann; Sosson, Marc; Galoyan, Ghazar; Sahakyan, Lilit; Topuz, Gultelin; Farouk Çelik, Omer; Avagyan, Ara; Muller, Carla

2014-05-01

During the Mesozoic, the Southern margin of the Eurasian continent was involved in the closure of the Paleotethys and opening Neotethys Ocean. Later, from the Jurassic to the Eocene, subductions, obductions, micro-plate accretions, and finally continent-continent collision occurred between Eurasia and Arabia, and resulted in the closure of Neotethys. In the Lesser Caucasus and NE Anatolia three main domains are distinguished from South to North: (1) the South Armenian Block (SAB) and the Tauride-Anatolide Platform (TAP), Gondwanian-derived continental terranes; (2) scattered outcrops of ophiolite bodies, coming up against the Sevan-Akera and Ankara-Erzincan suture zones; and (3) the Eurasian plate, represented by the Eastern Pontides margin and the Somkheto-Karabagh Arc. The slivers of ophiolites are preserved non-metamorphic relics of the now disappeared Northern Neotethys oceanic domain overthrusting onto the continental South Armenian Block (SAB) as well as on the Tauride-Anatolide plateform from the north to the south. It is important to point out that the major part of this oceanic lithosphere disappeared by subduction under the Eurasian Margin to the north. In the Lesser Caucasus, works using geochemical whole-rock analyses, 40Ar/39Ar dating of basalts and gabbro amphiboles and paleontological dating have shown that the obducted oceanic domain originates from a back-arc setting formed throughout Middle Jurassic times. The comprehension of the geodynamic evolution of the Lesser Caucasus supports the presence of two north dipping subduction zones: (1) a subduction under the Eurasian margin and to the south by (2) an intra-oceanic subduction allowing the continental domain to subduct under the oceanic lithosphere, thus leading to ophiolite emplacement. To the West, the NE Anatolian ophiolites have been intensely studied with the aim to characterize the type of oceanic crust which they originated from. Geochemical analyses have shown similar rock types as in Armenia, Mid Ocean Ridge Basalt (MORB) to volcanic arc rocks and Intra-Plate Basalts (IPB). Lithostratigraphic comparisons have shown that the relations between the three units, well identified in the Lesser Caucasus, are similar to those found in NE Anatolia, including the emplacement of stratigraphically conform and discordant deposits. New field data has also shed light on an outcrop of low-grade metamorphic rocks of volcanic origin overthrusted by the ophiolites towards the south on the northern side of the Erzincan basin, along the North Anatolian Fault (NAF). We extend our model for the Lesser Caucasus to NE Anatolia and infer that the missing of the volcanic arc formed above the intra-plate subduction may be explained by its dragging under the obducting ophiolite with scaling by faulting and tectonic erosion. In this large scale model the blueschists of Stepanavan, the garnet amphibolites of Amasia and the metamorphic arc complex of Erzincan correspond to this missing volcanic arc. We propose that the ophiolites of these two zones originate from the same oceanic domain and were emplaced during the same obduction event. This reconstructed ophiolitic nappe represents a preserved non-metamorphic oceanic domain over-thrusting up to 200km of continental domain along more than 500km. Distal outcrops of this exceptional object were preserved from latter collision which was concentrated along the suture zones.

Karyotype characteristics and polymorphism peculiarities of Chironomus bernensis Wülker & Klötzli, 1973 (Diptera, Chironomidae) from the Central Caucasus and Ciscaucasia

PubMed Central

Karmokov, Mukhamed Kh.; Polukonova, Natalia V.; Sinichkina, Olga V.

2015-01-01

Abstract Data about the karyotype characteristics, features of chromosomal polymorphism and larval morphology of populations of Chironomus bernensis Wülker & Klötzli, 1973 (Diptera, Chironomidae) from the Central Caucasus (the northern macroslope) and Ciscaucasia are presented. The characteristics of the pericentromeric regions of the long chromosomes of this species from Caucasian populations were very similar to the ones from some European populations (from Poland and Italy), but differed from Swiss and Siberian populations. In the North Caucasian populations 10 banding sequences were found: two in arms A, C, and E, and one in arms B, D, F, and G. Nine of them were already known for this species, and one, berC2, is described for the first time. Cytogenetic distances between all the studied populations of Chironomus bernensis show that close geographical location of all studied populations from the Central Caucasus and Ciscaucasia is reflected in their similar cytogenetic structure, but on the other hand, that they are more closely related to populations from Europe than to populations from Western Siberia. At the same time, all studied larvae from Caucasian populations have a four-bladed premandible, instead of a two-bladed one, as in the description of Chironomus bernensis from Switzerland (Wülker and Klötzli 1973, Polukonova 2005c). These peculiarities may indicate the relative isolation of the Caucasus from the viewpoint of microevolution. Further research on karyological and morphological characteristics of Chironomus bernensis from geographically distant regions is necessary as there is a possibility that the presently known species is actually polytypic and consists of several sibling species. PMID:26312128

Culture creates genetic structure in the Caucasus: Autosomal, mitochondrial, and Y-chromosomal variation in Daghestan

PubMed Central

Marchani, Elizabeth E; Watkins, W Scott; Bulayeva, Kazima; Harpending, Henry C; Jorde, Lynn B

2008-01-01

Background Near the junction of three major continents, the Caucasus region has been an important thoroughfare for human migration. While the Caucasus Mountains have diverted human traffic to the few lowland regions that provide a gateway from north to south between the Caspian and Black Seas, highland populations have been isolated by their remote geographic location and their practice of patrilocal endogamy. We investigate how these cultural and historical differences between highland and lowland populations have affected patterns of genetic diversity. We test 1) whether the highland practice of patrilocal endogamy has generated sex-specific population relationships, and 2) whether the history of migration and military conquest associated with the lowland populations has left Central Asian genes in the Caucasus, by comparing genetic diversity and pairwise population relationships between Daghestani populations and reference populations throughout Europe and Asia for autosomal, mitochondrial, and Y-chromosomal markers. Results We found that the highland Daghestani populations had contrasting histories for the mitochondrial DNA and Y-chromosome data sets. Y-chromosomal haplogroup diversity was reduced among highland Daghestani populations when compared to other populations and to highland Daghestani mitochondrial DNA haplogroup diversity. Lowland Daghestani populations showed Turkish and Central Asian affinities for both mitochondrial and Y-chromosomal data sets. Autosomal population histories are strongly correlated to the pattern observed for the mitochondrial DNA data set, while the correlation between the mitochondrial DNA and Y-chromosome distance matrices was weak and not significant. Conclusion The reduced Y-chromosomal diversity exhibited by highland Daghestani populations is consistent with genetic drift caused by patrilocal endogamy. Mitochondrial and Y-chromosomal phylogeographic comparisons indicate a common Near Eastern origin of highland populations. Lowland Daghestani populations show varying influence from Near Eastern and Central Asian populations. PMID:18637195

Accounting for mudflow genesis in preliminary assessment of the maximum volume of solid mudflow sediments in the North Caucasus

NASA Astrophysics Data System (ADS)

Zalikhanov, M. Ch.; Kondratieva, N. V.; Adzhiev, A. Kh.; Razumov, V. V.

2016-09-01

The area of investigation was subject to multifactor analysis of the relationship between the maximum amount of mudflow solid sediments ( W) and parameters such as the mudflow basin area ( S), average channel slope (α), and mudflow channel length ( L). They were used to obtain analytical expressions in order to approximate the W( S, L, α) relation based on the mudflow genesis and source height. Statistical data on mudflow manifestations in different basins in the North Caucasus covering more than fifty years were used to obtain the analytical expressions in order to assess the maximum volume of mudflow solid sediments.

Hermann Wilhelm Abich im Kaukasus: Zum zweihundertsten Geburtstag

NASA Astrophysics Data System (ADS)

Seibold, Ilse; Seibold, Eugen

2006-11-01

Hermann Abich was born in 1806 in Berlin and died in 1886 in Graz. He grew up in a wealthy family which had friendly relations with famous scientists like Alexander von Humboldt, Leopold von Buch or Carl Ritter. After his studies in Heidelberg and Berlin he turned to extended fieldwork at the volcanoes of Italy. In 1833 1834 he published excellent petrological/chemical results and got soon a good scientific reputation. Thus he was nominated as Professor for Geology and Mineralogy of the prestigious Russian University in Dorpat (now Tartu, Esthonia) in 1842. In 1844 he was sent to Armenia by the Russian authorities. For the next three decades his fieldwork with about 190 publications was concentrated on the Great and Lesser Caucasus. This was a period of Russian expansion to the South with long-lasting regional fights. But he enjoyed the support of powerful governors. He was an indefatigable and enthusiastic explorer and a precise observer and designer. His interests covered many fields: morphology, glaciology, structural geology, volcanology with Thermal Springs, mineral resources from hydrocarbons, coal, salt to ores, stratigraphy and paleontology as a base for geological maps. But he also gave advice for practical problems, and he was active in meteorology, botany and archaeology. Alltogether he became “the Father of Caucasus Geology”. The following sketch stresses only on three aspects of his activities. He was one of the first pioneers in hydrocarbon exploration, especially around the anticlines with the mud volcanoes near Baku. In many respects, however, his fundamental ideas were erronous. He explained the structure of the Great Caucasus by the traditional theories of Leopold von Buch and Elie de Beaumont. The Caucasus anticline “was elevated by forces acting from beneath”. Following them he tried to discover regularities in the strike of mountain chains. Similarily he treated volcanism like Alexander von Humboldt and Leopold von Buch with their two groups of phenomena: voluminous, mostly basaltic “elevation craters” versus isolated, mostly trachytic and relatively small cones of “true volcanoes”. In spite of the isolation of the Caucasus region he had cultivated continuously contacts with leading geologists in Europe and was honoured by many institutions. He left Russia in 1876 for Vienna planning to write there the final monograph volumes about his investigations but he died before he could complete them.

Tufa and travertine of the Lesser Caucasus: a light on the Quaternary palaeoenvironment of the Circumcaspian regions

NASA Astrophysics Data System (ADS)

Ollivier, V.; Roiron, P.; Nahapetyan, S.; Joannin, S.; Chataigner, C.

2012-04-01

In the course of the International Associated Laboratory HEMHA (Humans and Environment in Mountainous Habitats : the case of Armenia), the French Foreign Affair Ministry Caucasus Mission (CNRS-UMR 5133 Archéorient, Lyon University) and the French-German research program Ancient Kura (CNRS-UMR 7192 PrOCauLAC, Paris, France, Deutsches Archäologisches Institut, Eurasien-Abteilung, Berlin, Germany with ANR-CNRS and DFG funding) numerous sites of the Lesser Caucasus territory are under geomorphological, palaeoenvironmental and archaeological investigations. Through comparisons between the tufa/travertine system and the detrital formation morphosedimentary evolution, one of our research interests is to define the Late Quaternary landscape mutations as well as the origin and rhythmicity of the major morphogenic trends reversals. The impacts of the environmental changes highlighted on the human occupation modes are also debated. A total of 14 travertine and tufa formations were studied (8 Pleistocene and 6 Postglacial formations) on a Northwest-Southeast transect of more than 300 km across the Lesser Caucasus. Each of these carbonated system development are correlated with high global relative sea levels and interstadial climates on a range between the Marine Isotopic Stage 11 and 1 (ca. 335 to 1.5 Ky BP). The absolute chronology is constrained by a series of U/Th and 14C dating. A total of 24 dating was performed (6 radiocarbon and 18 U/Th datings), allowing a high quality overview of the travertinization process over the time at a regional scale. Jointly with the measurement of the late Quaternary interglacial series impact on the tufas development in the Caucasus, the geomorphological position of some travertinous formations and their absolute dating gives some clues about the neotectonic evolution of the studied valleys. In some area, the uplift rate has been determined (ca. 8 mm/year) and discretized from the alluvial incision signal. The analysis of the carbonated deposits (faciological determinations, palaeobotanical and palynological identifications of leave imprints and pollens), which are the expression of specific climatic conditions, and the comparative approach with the general morphosedimentary evolution, give a complete reading grid of the regional landscape mutation expressions and origins (Caspian Sea eustatism or exclusive climatic impact), necessary to understand the magnitude of the changes and their influence on the Circumcaspian societies.

The Near East as a cradle of biodiversity: A phylogeography of banded newts (genus Ommatotriton) reveals extensive inter- and intraspecific genetic differentiation.

PubMed

van Riemsdijk, Isolde; Arntzen, Jan W; Bogaerts, Sergé; Franzen, Michael; Litvinchuk, Spartak N; Olgun, Kurtuluş; Wielstra, Ben

2017-09-01

The banded newt (genus Ommatotriton) is widely distributed in the Near East (Anatolia, Caucasus and the Levant) - an understudied region from the perspective of phylogeography. The genus is polytypic, but the number of species included and the phylogenetic relationships between them are not settled. We sequenced two mitochondrial and two nuclear DNA markers throughout the range of Ommatotriton. For mtDNA we constructed phylogenetic trees, estimated divergence times using fossil calibration, and investigated changes in effective population size with Bayesian skyline plots and mismatch analyses. For nuDNA we constructed phylogenetic trees and haplotype networks. Species trees were constructed for all markers and nuDNA only. Species distribution models were projected on current and Last Glacial Maximum climate layers. We confirm the presence of three Ommatotriton species: O. nesterovi, O. ophryticus and O. vittatus. These species are genetically distinct and their most recent common ancestor was dated at ∼25Ma (Oligocene). No evidence of recent gene flow between species was found. The species show deep intraspecific genetic divergence, represented by geographically structured clades, with crown nodes of species dated ∼8-13Ma (Miocene to Early Quaternary); evidence of long-term in situ evolution and survival in multiple glacial refugia. While a species tree based on nuDNA suggested a sister species relationship between O. vittatus and O. ophryticus, when mtDNA was included, phylogenetic relationships were unresolved, and we refrain from accepting a particular phylogenetic hypothesis at this stage. While species distribution models suggest reduced and fragmented ranges during the Last Glacial Maximum, we found no evidence for strong population bottlenecks. We discuss our results in the light of other phylogeographic studies from the Near East. Our study underlines the important role of the Near East in generating and sustaining biodiversity. Copyright © 2017 Elsevier Inc. All rights reserved.

An annotated checklist of the Chilopoda and Diplopoda (Myriapoda) of the Abrau Peninsula, northwestern Caucasus, Russia

PubMed Central

Semenyuk, Irina I.; Tuf, Ivan H.

2016-01-01

Abstract Background The Abrau Peninsula is located in northwestern Caucasus between the cities of Novorossiysk and Anapa, Krasnodar Province, Russia. This paper contains an annotated checklist of the Chilopoda and Diplopoda inhabiting the Abrau Peninsula. New information The fauna of the Abrau Peninsula comprises 17 centipede (4 orders) and 16 millipede (6 orders) species. Henia taurica, hitherto known only from the Crimea, has now been reported from several localities in the studied region. The study also reveals two possibly new millipede species. Statistical analyses showed that habitat preferences of myriapod species within the Abrau Peninsula are caused by species geographic distribution pattern and microbiotope preferences. PMID:27346949

Multidimensional Mantle Convection Models in Eastern Anatolia, the North Arabian Platform, and Caucasus Region

NASA Astrophysics Data System (ADS)

Sengul Uluocak, E.; Shahnas, H.; Pysklywec, R.; Gogus, O.; Eken, T.

2017-12-01

Eastern Anatolia, the North Arabian Platform, and Caucasus regions show many features of collisional tectonics with different convergence rates and shortening from south to north. The volcanism, sediment provenience, and thermochronological data suggest that the shortening and exhumation in the Greater Caucasus started during the Eocene-Oligocene synchronously with the collision between Arabia-Bitlis-Pötürge Massif in the south. Previous works indicate that the uplift (up to 2 km) in Eastern Anatolia related to upwelling mantle following the deformation of the Arabian oceanic lithosphere ( 11 Ma) during the ongoing Greater Caucasus closure is the dominant tectonic processes in the center of the region. However, there is no integrated geodynamic model that explains the deformation mechanisms of the region -and their possible interactions with each other -under the dynamic forces. In this study, we use multidimensional mantle-lithosphere convection/deformation models to quantify the geodynamic processes as constrained by the geological/geophysical observations in the region. For the models, seismic studies provide the high-resolution images of the upwelling mantle beneath Eastern Anatolia and the presence -and the locations- of the seismically fast structures associated with the relic/subducted slabs at varying depths such as the Bitlis slab in the south, and the Pontide and Kura slabs in the north. Fast polarization directions observed from splitting analyses exhibit an overall NE-SW oriented mantle anisotropy and a comparison between Pn and SKS derived fast wave azimuths indicates a crust-mantle coupling most likely implying vertically coherent deformation to the north of the study area. For the geodynamic models, we modify the mantle and lithosphere rheology as well as the thermal state. We interpret the estimated uplift and subsidence anomalies related to lithospheric variations (ranging from 54 km to 211 km) and subducting slab behavior with observed topographic anomalies. These interpretations are compatible with the free air admittance functions and surface observations such as high surface heat flows, young volcanism, and Curie point depths in the region.

Application of a hybrid method for downscaling of the global climate model fields for evaluation of future surface mass balance of mountain glaciers

NASA Astrophysics Data System (ADS)

Morozova, Polina; Rybak, Oleg; Kaminskaia, Mariia

2017-04-01

Mountain glaciers in the Caucasus have been degrading during the last century. During this time period they lost approximately one-third in area and half of their volume. Prediction of their evolution in changing climate is crucial for the local economy because hydrological regime in the territory north to the Main Caucasus Chain is mainly driven by glacier run-off. For future projections of glaciers' surface mass balance (SMB) we apply a hybrid method of downscaling of GCM-generated meteorological fields from the global scale to the characteristic spatial resolution normally used for modeling of a single mountain glacier SMB. A method consists of two stages. On the first, dynamical stage, we use the results of calculations of regional climate model (RCM) HadRM3P for the Black Sea-Caspian region with a spatial resolution of approximately 25 km. Initial and boundary conditions for HadRM3P are provided by an AO GCM INMCM developed in the Institute of Numerical Mathematics (Moscow, Russia). Calculations were carried out for two time slices: the present (reference) climate (1971-2000 years) and climate in the late 21st century (2071-2100 years) according to scenario of greenhouse gas emissions RCP 8.5. On the second stage of downscaling, further regionalization is achieved by projecting of RCM-generated data to the high-resolution (25 m) digital elevation models in a domain enclosing target glaciers (Marukh in the Western Caucasus and Djankuat in the Central Caucasus, both being typical valley glaciers). Elevation gradient of surface air temperature and precipitation were derived from the model data. Further, results were corrected using data of observations. The incoming shortwave radiation is calculated separately, taking into account slopes, aspects and shade effect. In the end of the current century expected air temperature growth in the Central and Western Caucasus is about 5-6 °C (summer), and 2-3 °C (winter). Reduction in annual precipitation is not significant, less than 10%. Absorbed shortwave radiation will increase by approximately 5%. These changes yield in dramatic shifting of the ELAs to the positions much higher than at present. This will inevitably cause degradation of the glaciers and their gradual disappearance. The main contribution to glacier shrinking will be made by increase of air surface temperature via enhanced ablation and extension of the melting season duration.

Reducing Seismic Hazard and Building Capacity Through International Cooperation

NASA Astrophysics Data System (ADS)

Vergino, E. S.; Arakelyan, A.; Babayan, H.; Durgaryan, R.; Elashvili, M.; Godoladze, T.; Javakhishvili, Z.; Kalogeras, I.; Karakhanyan, A.; Martin, R. J.; Yetirmishli, G.

2012-12-01

During the last 50 years, the Caucasus, Central Asia and the Caspian Sea regions have experienced several devastating earthquakes. While each country in the region has worked with its neighbors on small, ad-hoc projects to improve preparedness, deeply ingrained political and ethnic rivalries, and severely stressed economies have severely hindered sustained regional cooperation. Future damaging earthquakes are inevitable and without proper planning the negative impact on public safety, security, economics and stability in these regions will be devastating. We have, through twelve years of international scientific cooperation, focused on the development of an expanded skill base and infrastructure, through the installation of new, modern, digital seismic monitoring networks, building of historic databases, sharing seismic, geologic and geophysical data, conducting joint scientific investigations utilizing the new digital data and applying modern techniques, as well as the development of regional hazard models that the scientists of the region share with their governments and use to advise them on the best ways to mitigate the impact of a damaging earthquake. We have established specialized regional scientific task-force teams who can carry out seismological, geological and engineering studies in the epicentral zone, including the collection of new scientific data, for better understanding of seismic and geodynamic processes as well to provide emergency support in crisis and post-crisis situations in the Southern Caucasus countries. "Secrecy" in crisis and post-crisis situations in the former Soviet Union countries, as well as political instabilities, led to an absence of seismic risk reduction and prevention measures as well as little to no training of scientific-technical personnel who could take action in emergency situations. There were few opportunities for the development of a next generation of scientific experts, thus we have placed emphasis on the inclusion and development of young scientists who are able to advise their countries' decision makers in the future. By building a common and shared set of databases, making available new modern, scientific tools, and providing joint training field exercises we are working to enable the countries to make independent decisions about their infrastructures and to pool their resources in the event of another earthquake. Out of the earthquakes' devastation has come a positive outcome: a scientific partnership to address the seismic hazards along one of the world's most tectonically active regions. This is contributing to a rapprochement of the scientists, decision makers, and politicians in this region. This work was supported through the following international projects: ISTC A-1418 Project "Open Network of Scientific Centers for Mitigation Risk of Natural Hazards in the Southern Caucasus and Central Asia", ISTC CSP-053 Project "Development of Communication System for Seismic Hazard Situations in the Southern Caucasus and Central Asia", and NATO SfP- 983284 Project "Caucasus Seismic Emergency Response", with participants from the Southern Caucasus countries, the US, Greece, Turkey, and France. This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory in part under Contract W-7405-Eng-48 and in part under Contract DE-AC52-07NA27344.

Investigation on the age of mineralization in the Sungun porphyry Cu-Mo deposit, NW Iran with a regional metallogenic perspective

NASA Astrophysics Data System (ADS)

Simmonds, Vartan; Moazzen, Mohssen; Mathur, Ryan

2016-04-01

The Sungun porphyry copper deposit (PCD) is located in NW Iran, neighbouring several other PCDs and prospects in the region and the Lesser Caucasus (south Armenia). It lies on the Urumieh-Dokhtar magmatic arc (UDMA), which formed through the northeast-ward subduction of the Neo-Tethyan oceanic crust beneath the Central Iranian plate during late-Mesozoic and early-Cenozoic [1], and hosts the porphyry copper metallogenic belt of Iran. The Sungun PCD is the second largest deposit in Iran with ore reserves of about 850 Mt at 0.62 wt% Cu and 0.01 wt% Mo and probable reserves over 1Gt. The monzonitic to quartz monzonitic porphyry stock intruded the upper Cretaceous carbonates and Eocene volcano-sedimentary rocks. It produced a skarn-type mineralization at its contact zone with the carbonate rocks, as well as vast hydrothermal alteration zones and porphyry-type Cu and Mo mineralization. The zircon U-Pb age of the host porphyry stock is about 22.5±0.4 to 20.1±0.4 Ma [2]. Re-Os dating of four molybdenite separates from this PCD shows ages ranging between 22.9±0.2 to 21.7±0.2 Ma, with an average of 22.57±0.2 Ma, corresponding to the early Miocene (Aquitanian). These ages indicate that both the porphyry stock and the Cu-Mo mineralization are post-collisional events, similar to many other deposits and prospects in NW and central Iran and south Armenia, and the mineralization occurred shortly after the emplacement of the host stock, corresponding better to the ages obtained from the marginal parts of the stock. Magmatism and mineralization in Sungun coincides with the third metallogenic epoch in the Lesser Caucasus (Eocene to Miocene; [3]), though it is considerably younger than all of the dated PCDs and prospects in the south Armenia. It also postdates Cu-Mo mineralizations in the Saheb Divan (35 Ma), Qaradagh batholith (31.22±0.28 to 25.19±0.19 Ma), as well as Haft Cheshmeh PCD (28.18±0.42 to 27.05±0.37 Ma) in NW Iran, while it seems to be coeval with the Kighal, Masjed Daghi and Niaz deposits and prospects (20-22 Ma). In this regard and considering the available age data, this event can be considered as the third Cu-Mo metallogenic epoch in NW Iran. Meanwhile, mineralization in Sungun is older than all the porphyry Cu-Mo mineralization across the central and SE parts of UDMA (except for Bondar Hanza PCD in Kerman zone with the age of 28.71±0.46 to 28.06±0.47 Ma [2]). Therefore, these ages indicate that collision between the Arabian and Iranian plates was dischronous, being earlier in NW Iran and later in SE Iran, which can be resulted from the oblique convergence of the plates. References [1] Berberian, M. and King, GCP. (1981). Towards a paleogeography and tectonic evolution of Iran. Canadian Journal of Earth Sciences, 18, 210-265. [2] Aghazadeh, M. et al. (2015). Temporal-spatial distribution and tectonic setting of porphyry copper deposits in Iran: constraints from zircon U-Pb and molybdenite Re-Os geochronology. Ore Geology Reviews, 70, 385-406. [3] Moritz, R. et al. (2012). Diversity of geodynamic settings during Cu, Au and Mo ore formation in the Lesser Caucasus: New age Constraints. Proceedings of 1st Triennial EMC Meeting, Frankfurt, Germany.

Hydrothermal Evolution of the Giant Cenozoic Kadjaran porphyry Cu-Mo deposit, Tethyan metallogenic belt, Armenia, Lesser Caucasus: mineral paragenetic, cathodoluminescence and fluid inclusion constraints

NASA Astrophysics Data System (ADS)

Hovakimyan, Samvel; Moritz, Robert; Tayan, Rodrik; Rezeau, Hervé

2016-04-01

The Lesser Caucasus belongs to the Central segment of the Tethyan metallogenic belt and it is a key area to understand the metallogenic evolution between the Western & Central parts of the Tethyan belt and its extension into Iran. Zangezur is the most important mineral district in the southernmost Lesser Caucasus. It is a component of the South Armenian block, and it was generated during the convergence and collision of the southern margin of the Eurasian plate and the northern margin of the Arabian plate, and terranes of Gondwana origin (Moritz et al., in press). The Zangezur ore district consists of the Tertiary Meghri-Ordubad composite pluton, which is characterized by a long-lasting Eocene to Pliocene magmatic, tectonic and metallogenic evolution. It hosts major porphyries Cu-Mo and epithermal Au - polymetallic deposits and occurrences, including the giant world class Kadjaran porphyry Cu-Mo deposit (2244 Mt reserves, 0.3% Cu, 0.05% Mo and 0.02 g/t Au). The Kadjaran deposit is hosted by a monzonite intrusion (31.83±0.02Ma; Moritz et al., in press). Detailed field studies of the porphyry stockwork and veins of the different mineralization stages, their crosscutting and displacement relationships and the age relationship between different paragenetic mineral associations were the criteria for distinction of the main stages of porphyry mineralization at the Kadjaran deposit. The economic stages being: quartz- molybdenite, quartz-molybdenite-chalcopyrite, and quartz-chalcopyrite. The main paragenetic association of the Kadjaran porphyry deposit includes pyrite, molybdenite, chalcopyrite, bornite, chalcocite, pyrrhotite, covellite, sphalerite, and galena. Recent field observations in the Kadjaran open pit revealed the presence of epithermal veins with late vuggy silica and advanced argillic alteration in the north-eastern and eastern parts of the deposit. They are distributed as separate veins and have also been recognized in re-opened porphyry veins and in stockwork. One of them is the east-west-oriented 6th vein zone in the northern part of the deposit, which contains quartz-molybdenite veins and late quartz-galena-sphalerite veins. This is interpreted as a telescoping between porphyry and epithermal environments. It is supported by microscopic studies of mineral paragenesis, which reveal the presence of enargite and tennantite-tetrahedrite, luzonite, sphalerite, and galena, generally in a gangue of quartz, followed by a late carbonate and gypsum stage. On-going fluid inclusion studies are being carried out on quartz samples from the different mineralization stages. Five types of fluid inclusions were distinguished according to their nature, bubble size, and daughter mineral content: vapor-rich, aqueous-carbonic, brine, polyphase brine and liquid-rich inclusions. Cathodoluminescence images from the porphyry veins reveal four generations of quartz. Molybdenite and chalcopyrite are associated with two different dark luminescent quartz generations, which contain typical brine, aqueous-carbonic and vapour-rich H2O fluid inclusions, with some of them coexisting locally as boiling assemblages. Epithermal veins are mainly characterized by liquid-rich H2O fluid inclusions. Microthermometric studies of fluid inclusions reveal a major difference in homogenisation temperatures between the early quartz-molybdenite- chalcopyrite stage (Thtotal between 3600 and 4250C) and the late quartz-galena-sphalerite vein stage (Thtotal 300-2700C), which is attributed to the transition from a porphyry to an epithermal environment in the Kadjaran deposit.

Endogenous Retroviral Insertions Indicate a Secondary Introduction of Domestic Sheep Lineages to the Caucasus and Central Asia between the Bronze and Iron Age

PubMed Central

Schroeder, Oskar; Benecke, Norbert; Frölich, Kai; Peng, Zuogang; Kaniuth, Kai; Sverchkov, Leonid; Reinhold, Sabine; Belinskiy, Andrey; Ludwig, Arne

2017-01-01

Sheep were one of the first livestock species domesticated by humans. After initial domestication in the Middle East they were spread across Eurasia. The modern distribution of endogenous Jaagsiekte sheep retrovirus insertions in domestic sheep breeds suggests that over the course of millennia, successive introductions of improved lineages and selection for wool quality occurred in the Mediterranean region and most of Asia. Here we present a novel ancient DNA approach using data of endogenous retroviral insertions in Bronze and Iron Age domestic sheep from the Caucasus and Pamir mountain areas. Our findings support a secondary introduction of wool sheep from the Middle East between the Late Bronze Age and Iron Age into most areas of Eurasia. PMID:28632161

Endogenous Retroviral Insertions Indicate a Secondary Introduction of Domestic Sheep Lineages to the Caucasus and Central Asia between the Bronze and Iron Age.

PubMed

Schroeder, Oskar; Benecke, Norbert; Frölich, Kai; Peng, Zuogang; Kaniuth, Kai; Sverchkov, Leonid; Reinhold, Sabine; Belinskiy, Andrey; Ludwig, Arne

2017-06-20

Sheep were one of the first livestock species domesticated by humans. After initial domestication in the Middle East they were spread across Eurasia. The modern distribution of endogenous Jaagsiekte sheep retrovirus insertions in domestic sheep breeds suggests that over the course of millennia, successive introductions of improved lineages and selection for wool quality occurred in the Mediterranean region and most of Asia. Here we present a novel ancient DNA approach using data of endogenous retroviral insertions in Bronze and Iron Age domestic sheep from the Caucasus and Pamir mountain areas. Our findings support a secondary introduction of wool sheep from the Middle East between the Late Bronze Age and Iron Age into most areas of Eurasia.

EPA's Efforts in Eurasia

EPA Pesticide Factsheets

EPA has been collaborating with Russia, Central Asia, the Caucasus and Ukraine for over 20 years and continues to work with their governments and non-governmental organizations on environment, science and technology issues.

Seismic Tomography Of The Caucasus Region

NASA Astrophysics Data System (ADS)

Javakhishvili, Z.; Godoladze, T.; Gok, R.; Elashvili, M.

2007-12-01

The Caucasus is one of the most active segments of the Alpine-Himalayan collision belt. We used the catalog data of Georgian Seismic Network to calculate the reference 1-D and 3-D P-velocity model of the Caucasus region. The analog recording period in Georgia was quite long and 17,000 events reported in the catalog between 1956 and 1990. We carefully eliminated some arrivals due to ambiguities for analog type data picking and station time corrections. We choose arrivals with comparably low residuals between observed and calculated travel times (<1 sec). We also limited our data to minimum 10 P-arrivals and maximum azimuthal gap of 180 degrees. Finally,475 events were selected with magnitude greater than 1.5 recorded by 84 stations. We obtained good resolution down to 70 km. First, we used 1-D coupled inversion algorithm (VELEST) to calculate the velocity model and the relocations. The same model convergence is observed for the mid and lower crust. The upper layer (0-10km) is observed to be sensitive to the starting model. We used vertical seismic prospecting data from boreholes in Georgia to fix upper layer velocities. We relocated all events in the region using the new reference 1- D velocity model. The 3-D coupled inversion algorithm (SIMULPS14) was applied using the 1-D reference model as a starting model. We observed very large amount of shift at horizontal directions (up to 50 km). We observed clustered events where they are well correlated with query blasts from Tkibuli mining area. We applied the resolution test to estimate the spatial resolution of the tomographic images. The results of the test indicate that the initial model is well reconstructed for all depth slices, though it is badly reconstructed for the shallowest layer (with depth = 5km). The Moho geometry beneath Caucasus has been determined reliably by the previous geophysical studies. It has a relatively large depth variation in this region from 28 to 61 km depth, according to those studies and our tomography result for the uppermost mantle (50 km) reflects this depth variation of the Moho discontinuity.

Natural radionuclides in rocks and soils of the high-mountain regions of the Great Caucasus

NASA Astrophysics Data System (ADS)

Asvarova, T. A.; Abdulaeva, A. S.; Magomedov, M. A.

2012-06-01

The results of the radioecological survey in the high-mountain regions of the Great Caucasus at the heights from 2200 to 3800 m a.s.l. are considered. This survey encompassed the territories of Dagestan, Azerbaijan, Georgia, Chechnya, Northern Ossetia-Alania, Kabardino-Balkaria, Karachay-Cherkessia, and the Stavropol and Krasnodar regions. The natural γ background radiation in the studied regions is subjected to considerable fluctuations and varies from 6 to 40 μR/h. The major regularities of the migration of natural radionuclides 238U, 232Th, 226Ra, and 40K in soils in dependence on the particular environmental conditions (the initial concentration of the radionuclides in the parent material; the intensity of pedogenesis; the intensity of the vertical and horizontal migration; and the geographic, climatic, and landscape-geochemical factors) are discussed.

[Mineral springs on the north-east of Caucasus and its role in the treatment of soldiers of the Russian army in XIX--beginning XX c].

PubMed

Akhmadov, T Z; Poddubnyĭ, M V

2013-07-01

The article is concerned to the history of formation of sanitary-treatment stations on the North Caucasus, in Chechnya (Goryachevodsky and Mikhailovsky mineral springs) till 1917 year. The basis of the article are archive documents, scientific papers of contemporaries and official documents. Goryachevodsky and Mikhailovsky mineral springs were more than 70 years the one the best recreative base of the Caucasian standing army including the caucasian cossack troop. The sanitary-treatment stations were of great importance during the active military actions with Hill people within the territory of Chechnya and Dagestan, during the Crimean War (1853-1856), The Russo-Turkish War of 1877-1878 and the First World War (1914-1918), when the amount of the wounded and ill soldiers increased.

A framework for analyzing sex-selective abortion: the example of changing sex ratios in Southern Caucasus

PubMed Central

Hohmann, Sophie A; Lefèvre, Cécile A; Garenne, Michel L

2014-01-01

The paper proposes a socioeconomic framework of supply, demand, and regulation to explain the development of sex-selective abortion in several parts of the world. The framework is then applied to three countries of southern Caucasus (Armenia, Azerbaijan, and Georgia) where sex-selective abortion has developed since the collapse of the Soviet Union. The authors argue that sex-selective abortion cannot be explained simply by patriarchal social systems, sex discrimination, or son preference. The emphasis is put on the long-term acceptability of abortion in the region, on acceptability of sex-screening by both the medical establishment and by the population, on newly imported techniques of sex-screening, and on the changing demand for children associated with the major economic and social changes that followed the dismantlement of the Soviet Union. PMID:25349481

The biological activity of chernozems in the Central Caucasus Mountains (Terskii variant of altitudinal zonality), Kabardino-Balkaria

NASA Astrophysics Data System (ADS)

Gedgafova, F. V.; Uligova, T. S.; Gorobtsova, O. N.; Tembotov, R. Kh.

2015-12-01

Some parameters of the biological activity (humus content; activity of hydrolytic enzymes invertase, phosphatase, urease; and the intensity of carbon dioxide emission) were studied in the chernozems of agrocenoses and native biogeocenoses in the foothills of the Caucasus Mountains representing the Terskii variant of the altitudinal zonality. The statistically significant differences were revealed between the relevant characteristics of the soils of the agrocenoses and of the native biogeocenoses. The integral index of the ecological-biological state of the soils was used to estimate changes in the biological activity of the arable chernozems. The 40-60% decrease of this index in the cultivated chernozems testified to their degradation with a decrease in fertility and the disturbance of ecological functions as compared to these characteristics in the virgin chernozems.

48 CFR 252.225-7001 - Buy American and Balance of Payments Program.

Code of Federal Regulations, 2014 CFR

2014-10-01

... clause: (a) “South Caucasus/Central and South Asian (SC/CASA) state” means Armenia, Azerbaijan, Georgia... Asian (SC/CASA) state end product” means an article that— (i) Is wholly the growth, product, or...

Loss of traditional knowledge aggravates wolf-human conflict in Georgia (Caucasus) in the wake of socio-economic change.

PubMed

Kikvidze, Zaal; Tevzadze, Gigi

2015-09-01

Reports of the damage from wolf attacks have increased considerably over the last decade in Georgia (in the Caucasus). We interviewed locals about this problem in two focal regions: the Lanchkhuti area (in western Georgia) and Kazbegi District (in eastern Georgia) where livestock numbers had increased by an order of magnitude owing to dramatic shifts in the local economies over the last decade. This coincided with expanding habitats for wolves (abandoned plantations, for example). We found that the perceived damage from wolves was positively correlated with a poor knowledge of wolf habits and inappropriate livestock husbandry practices. Our results suggest a loss of traditional knowledge contributes strongly to the wolf-human conflicts in Georgia. Restoring traditional, simple but good practices--such as protecting herds using shepherd dogs and introducing bulls into the herds-can help one solve this problem.

[The Dagestan gene pool: interethnic and intraethnic differentiation of eight aboriginal ethnic groups: analysis based on data on the AB0 and Rhesus erythrocyte antigen systems].

PubMed

Radzhabov, M O; Mamaev, I A; Shamov, I A; Gasaev, D G; Shneĭder, Iu V

2009-03-01

Analysis of the genetic variation of eight aboriginal Dagestan ethnic groups based on data on the AB0 and Rhesus blood groups has been carried out in a total sample of 18 348 subjects. The degree of genetic differentiation (G(ST)) and the levels of intraethnic (H(S) and interethnic (H(T)) variations of Dagestan ethnic groups have been estimated at two hierarchical levels of the population system. Prevalence of intraethnic diversity over interethnic one has been found in Dagestan populations. The parameters of subdivision of Dagestan populations were compared with those for the populations of all other regions of the Caucasus and the Pamir. The population subdivision of ethnic groups of Dagestan and other regions of the Caucasus is lower than that of Pamir ethnic groups.

[The rate and dynamics of prevalence of diseases of digestive system in north Caucasus federal okrug and Stavropolsky kray].

PubMed

Muravyev, K A

2011-01-01

The article presents the results of analysis of digestive system morbidity during last decade among adult population of Stavropolsky kray as compared with North Caucasus federal okrug and Russia in general. The analysis according classes of diseases established that in the structure ofgeneral morbidity according the appealability data first place is for diseases of respiratory organs, second place is for diseases of circulatory system, third place is for diseases of urogenital system, fourth place is for diseases of musculoskeletal system, fifth place is for traumas, intoxications and other aftermath of external causes, sixth place is for diseases of digestive system and also pregnancy, delivery and puerperal period In Stavropolsky kray, gastritis and duodenitis are registered much more infrequently as compared with corresponding morbidity increase among adult population of Russia from 2001 to 2010.

[Principles of surgical care organization and structural characteristics of sanitary casualties in counter-terrorist operations in the Northern Caucasus (Report I)].

PubMed

Gumanenko, E K; Samokhvalov, I M; Trusov, A A; Severin, V V

2005-01-01

Two operational-and-tactical factors had the main influence on organization of the surgical care rendered to the casualties on the Northern Caucasus: the fulminant and maneuverable nature of combat operations at the beginning of both armed conflicts and rather small territory of war theatre. The main special features of organization of surgical care to the casualties were the use of Medical Squads of Special Purpose in the combat conditions and maximal approximation of the specialized surgical care to the wounded by echelonment of medical units and wide use of helicopter evacuation. The structure of sanitary losses was characterized by the increase in the frequency of mechanical traumas, thermal and combined injuries, by the high share of the casualties with head injuries. Besides the number of seriously wounded and critical casualties has increased.

The Greater Caucasus Glacier Inventory (Russia, Georgia and Azerbaijan)

NASA Astrophysics Data System (ADS)

Tielidze, Levan G.; Wheate, Roger D.

2018-01-01

There have been numerous studies of glaciers in the Greater Caucasus, but none that have generated a modern glacier database across the whole mountain range. Here, we present an updated and expanded glacier inventory at three time periods (1960, 1986, 2014) covering the entire Greater Caucasus. Large-scale topographic maps and satellite imagery (Corona, Landsat 5, Landsat 8 and ASTER) were used to conduct a remote-sensing survey of glacier change, and the 30 m resolution Advanced Spaceborne Thermal Emission and Reflection Radiometer Global Digital Elevation Model (ASTER GDEM; 17 November 2011) was used to determine the aspect, slope and height distribution of glaciers. Glacier margins were mapped manually and reveal that in 1960 the mountains contained 2349 glaciers with a total glacier surface area of 1674.9 ± 70.4 km2. By 1986, glacier surface area had decreased to 1482.1 ± 64.4 km2 (2209 glaciers), and by 2014 to 1193.2 ± 54.0 km2 (2020 glaciers). This represents a 28.8 ± 4.4 % (481 ± 21.2 km2) or 0.53 % yr-1 reduction in total glacier surface area between 1960 and 2014 and an increase in the rate of area loss since 1986 (0.69 % yr-1) compared to 1960-1986 (0.44 % yr-1). Glacier mean size decreased from 0.70 km2 in 1960 to 0.66 km2 in 1986 and to 0.57 km2 in 2014. This new glacier inventory has been submitted to the Global Land Ice Measurements from Space (GLIMS) database and can be used as a basis data set for future studies.

48 CFR 252.225-7001 - Buy American Act and Balance of Payments Program.

Code of Federal Regulations, 2013 CFR

2013-10-01

... clause: (a) “South Caucasus/Central and South Asian (SC/CASA) state” means Armenia, Azerbaijan, Georgia... Asian (SC/CASA) state end product” means an article that— (i) Is wholly the growth, product, or...

48 CFR 252.225-7001 - Buy American Act and Balance of Payments Program.

Code of Federal Regulations, 2012 CFR

2012-10-01

... clause: (a) “South Caucasus/Central and South Asian (SC/CASA) state” means Armenia, Azerbaijan, Georgia... Asian (SC/CASA) state end product” means an article that— (i) Is wholly the growth, product, or...

75 FR 1567 - Defense Federal Acquisition Regulation Supplement; Foreign Participation in Acquisitions in...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-01-12

... acquisition from the nine South Caucasus/Central and South Asian (SC/CASA) states; and Determination of..., ammunition, or war materials) from the SC/CASA states to support operations in Afghanistan. The end of the...

Investigation of neotectonic deformation in the eastern part of the Caucasus Intermountain Area, Kura Fold-Thrust Belt, Georgia

NASA Astrophysics Data System (ADS)

Sukhishvili, L.; Javakhishvili, Z.; Forte, A. M.; Boichenko, G.; Merebashvili, G.

2016-12-01

The Kura Fold-Thrust Belt (KFTB), located in the eastern Caucasus, is a young first-order structural system within the Arabia-Eurasia collision zone and absorbs greater than 50% of total convergence between the Greater and Lesser Caucasus at this longitude. The structure, activity, and initiation age of the KFTB is well constrained in Azerbaijan, but less so within Georgia. Based on regional stratigraphic relationships, it is suggested that deformation of the Georgian portion of the KFTB initiated before or during Akchagyl time (3.4-1.6 Ma), but field data verifying this hypothesis is lacking. The Gombori Range represents the western extent of the KFTB, rises to elevations > 1900 m, and currently is a topographic barrier to south-directed rivers flowing from the Greater Caucasus, with the first river crossing the KFTB >100 km to the east. The Gombori Range also contains exposures of deformed Pliocene to Quaternary fluvial sediments that likely record a drainage network reorganization in response to the growth of the KFTB and a shift from through-going south-flowing rivers to the current network. To test this hypothesis, we focus on 1 km exposure of continuous Plio-Quaternary section along the Turdo river, which flows northwards from the Gombori range. The exposures are a >40 m vertical cliff, so we first use photogrammetry to construct a digital outcrop model and analyze it in a virtual reality environment to select strategic locations for detailed paleocurrent analysis in attempt to bracket the timing of KFTB development. Understanding the history and current location of active deformation in this region is essential for seismic hazard assessment for the nearby major cities of Telavi and Tbilisi. From previous active fault studies, the maximum earthquake magnitude in this region is Mw=7.0 and the strongest recorded earthquake was a Mw=5.3 in 1997. Observed seismicity is sparse and it's difficult to delineate active faults by earthquakes hypocenters. To determine active structures, we recalculate hypocenters to determine fault plane solutions and we also use tectonic geomorphology (e.g. normalized channel steepness) to help clarify the location of active deformation. We use the information derived from these different approaches to develop a more complete deformation history of the western portion of KFTB.

Urging the Secretary of State to designate the Caucasus Emirate as a foreign terrorist organization.

THOMAS, 111th Congress

Rep. Hastings, Alcee L. [D-FL-23

2010-04-29

House - 06/15/2010 Referred to the Subcommittee on Immigration, Citizenship, Refugees, Border Security, and International Law. (All Actions) Tracker: This bill has the status IntroducedHere are the steps for Status of Legislation:

Geophysical Investigations in the Caucasus (1925 - 2012): Initial, Basic and Modern Stages

NASA Astrophysics Data System (ADS)

Eppelbaum, L. V.

2012-04-01

The Caucasian Mountains occupy an area of about 440,000 km2. A number of important mineral resources are concentrated there. Geophysical data on the geological structure of Caucasus can shed light on the basic principles of evolution of the Earth, the distribution of minerals and seismic activity. However, geophysical surveys under complex conditions are generally riddled by poor accessibility to certain mountainous regions, the unevenness of observation surfaces, as well as by a great variety and frequent changes of tectonic structures and geological bodies with variable physical properties. These factors either restrict geophysical surveys in difficult environments or confine the scope of useful information drawn from the results obtained. This has led to the development of special techniques in geophysical surveys, data processing and interpretation that draws heavily on the experience accumulated in the specific conditions of these mountainous regions. First applied geophysical observations in the Caucasus region - thermal measurements in boreholes - were carried out by Bazevich (1881) in the Absheron Peninsula. At the same time, start of the initial stage is usually referred to as the mid 20-s of the XX century, when the rare, but systematic geophysical observations (mainly gravity and magnetic) were begun in some Caucasian areas. Somewhat later began to apply the resistivity method. Mid 30-s is characterized by the beginning of application of borehole geophysics and seismic prospecting. The marine seismics firstly in the former Soviet Union was tested in the Caspian Sea. In general, the initial stage is characterized by slow, but steady rise (except during World War II) lasted until 1960. A basic stage (1960-1991) is characterized by very intensive employment of geophysical methods (apparently, any possible geophysical methods were tested in this region). At this time the Caucasus region is considered in the former Soviet Union as a geophysical polygon for testing different geophysical methods and methodologies in complicated environments. Airborne magnetic and gravity surveys covered all the Caucasus, regional seismic and magnetotelluric studies were used as reference profiles for deep structure investigation. Numerous effective applications of geophysical methods for searching ore, oil&gas deposits, building raw, fresh water localization, solving engineering, etc. was demonstrated. Seismological investigations (including different methods) were widely applied throughout the entire Caucasian region. Satellite geophysical examinations were successfully combined with other methods. Finally, destruction of the former Soviet Union in 1991 (beginning of the modern stage) caused a sharp common decreasing of the geophysical activity in this region. Only foreign oil-&gas companies (mainly American and England) demonstrated some industrial geophysical activity basically in the Caspian Sea. In the last few years the situation began to straighten out, especially in the field of seismology. This presentation is based of the author's experience (e.g., Eppelbaum, 1989, 1991, 2009; Eppelbaum et al., 1987; Eppelbaum and Finkelstein, 1998; Eppelbaum and Khesin, 1988, 1992, 2002, 2004, 2011, 2012; Eppelbaum and Mishne, 2011; Eppelbaum et al., 2003, 2004; Khesin et al., 1988, 1993a, 1993b, 1996, 1997; Khesin and Eppelbaum, 1986, 1994, 1997, 2007; Pilchin and Eppelbaum, 1997, 2011) and corresponding publications and reviews of other authors.

48 CFR 225.003 - Definitions.

Code of Federal Regulations, 2013 CFR

2013-10-01

... Asian (SC/CASA) state means Armenia, Azerbaijan, Georgia, Kazakhstan, Kyrgyzstan, Pakistan, Tajikistan, Turkmenistan, or Uzbekistan. (15) South Caucasus/Central and South Asian (SC/CASA) state construction material... South Asian (SC/CASA) state end product means an article that— (i) Is wholly the growth, product, or...

48 CFR 225.003 - Definitions.

Code of Federal Regulations, 2012 CFR

2012-10-01

... Asian (SC/CASA) state means Armenia, Azerbaijan, Georgia, Kazakhstan, Kyrgyzstan, Pakistan, Tajikistan, Turkmenistan, or Uzbekistan. (15) South Caucasus/Central and South Asian (SC/CASA) state construction material... South Asian (SC/CASA) state end product means an article that— (i) Is wholly the growth, product, or...

48 CFR 225.003 - Definitions.

Code of Federal Regulations, 2011 CFR

2011-10-01

... Asian (SC/CASA) state means Armenia, Azerbaijan, Georgia, Kazakhstan, Kyrgyzstan, Pakistan, Tajikistan, Turkmenistan, or Uzbekistan. (15) South Caucasus/Central and South Asian (SC/CASA) state construction material... South Asian (SC/CASA) state end product means an article that— (i) Is wholly the growth, product, or...

48 CFR 225.003 - Definitions.

Code of Federal Regulations, 2014 CFR

2014-10-01

... Asian (SC/CASA) state means Armenia, Azerbaijan, Georgia, Kazakhstan, Kyrgyzstan, Pakistan, Tajikistan, Turkmenistan, or Uzbekistan. (15) South Caucasus/Central and South Asian (SC/CASA) state construction material... South Asian (SC/CASA) state end product means an article that— (i) Is wholly the growth, product, or...

The Armenian and NW Anatolian ophiolites: new insights for the closure of the Tethys domain and obduction onto the South Armenian Block and Anatolian-Tauride Platform before collision through dynamic modeling

NASA Astrophysics Data System (ADS)

Hässig, Marc; Rolland, Yann; Sosson, Marc; Hassani, Riad; Topuz, Gultekin; Faruk Çelik, Ömer; Gerbault, Muriel; Galoyan, Ghazar; Müller, Carla; Sahakyan, Lilit; Avagyan, Ara

2013-04-01

In the Lesser Caucasus three main domains are distinguished from SW to NE: (1) the South Armenian Block (SAB), a Gondwanian-derived continental terrane; (2) scattered outcrops of ophiolites coming up against the Sevan-Akera suture zone; and (3) the Eurasian plate. The Armenian ophiolites represent remnants of an oceanic domain which disappeared during Eurasia-Arabia convergence. Previous works using geochemical whole-rock analyses, 40Ar/39Ar and paleontological dating have shown that the ophiolite outcrops throughout this area were emplaced during the Late Cretaceous as one non-metamorphic preserved ophiolitic nappe of back-arc origin that formed during Middle to Late Jurassic. From these works, tectonic reconstructions include two clearly identified subductions, one related to the Neotethys subduction beneath the Eurasian margin and another to intra-oceanic subduction responsible for the opening of the back-arc basin corresponding to the ophiolites of the Lesser Caucasus. The analysis of the two stages of metamorphism of the garnet amphibolites of the ophiolite obduction sole at Amasia (M1: HT-LP peak of P = 6-7 kbar and T > 630°C; M2; MP-MT peak at P = 8-10 kbar and T = 600°C) has allowed us to deduce the onset of subduction of the SAB at 90 Ma for this locality, which age coincides with other paleontological ages at the obduction front. A preliminary paleomagnetic survey has also brought quantification to the amount of oceanic domain which disappeared by subduction between the SAB and Eurasia before collision. We propose a dynamic finite element model using ADELI to test the incidence of parameters such as the density of the different domains (or the interval between the densities), closing speed (or speeds if sporadic), the importance and interactions of mantle discontinuities with the subducting lithosphere and set a lithospheric model. Our field observations and analyses are used to validate combinations of factors. The aim is to better qualify the predominant factors and quantify the conditions leading to the onset of obduction, the paradox of dense oceanic lithosphere emplaced on top of a continental domain, after subduction and prior to collision. The results of this modeling are also compared to new observations of the assumed eastward extension of this ophiolitic nappe in NW Anatolia. Analyses of the Refahiye ophiolites show similar geochemical signatures as the Armenian ophiolites, due to a similar setting of formation (back-arc). The impact of the obduction of such a vast oceanic domain is not to be taken for granted when considering the following collision stage.

GPS-derived crustal deformation in Azerbaijan

NASA Astrophysics Data System (ADS)

Safarov, Rafig; Mammadov, Samir; Kadirov, Fakhraddin

2017-04-01

Crustal deformations of the Earth's crust in Azerbaijan were studied based on GPS measurements. The GPS velocity vectors for Azerbaijan, Iran, Georgia, and Armenia were used in order to estimate the deformation rates. It is found that compression is observable along the Greater Caucasus, in Gobustan, the Kura depression, Nakhchyvan Autonomous Republic, and adjacent areas of Iran. The axes of compression/contraction of the crust in the Greater Caucasus region are oriented in the S-NE direction. The maximum strain rate is observed in the zone of mud volcanism at the SHIK site (Shykhlar), which is marked by a sharp change in the direction of the compression axes (SW-NE). It is revealed that the deformation field also includes the zones where strain rates are very low. These zones include the Caspian-Guba and northern Gobustan areas, characterized by extensive development of mud volcanism. The extension zones are confined to the Lesser Caucasus and are revealed in the Gyadabei (GEDA) and Shusha (SHOU) areas. The analysis of GPS data for the territory of Azerbaijan and neighboring countries reveals the heterogeneous patterns of strain field in the region. This fact suggests that the block model is most adequate for describing the structure of the studied region. The increase in the number of GPS stations would promote increasing the degree of detail in the reconstructions of the deformation field and identifying the microplate boundaries.It is concluded that the predominant factor responsible for the eruption of mud volcanoes is the intensity of gasgeneration processes in the earth's interior, while deformation processes play the role of a trigger. The zone of the epicenters of strong earthquakes is correlated to the gradient zone in the crustal strain rates.

Circum-Mediterranean phylogeography of a bat coupled with past environmental niche modeling: A new paradigm for the recolonization of Europe?

PubMed

Bilgin, Raşit; Gürün, Kanat; Rebelo, Hugo; Puechmaille, Sebastien J; Maracı, Öncü; Presetnik, Primoz; Benda, Petr; Hulva, Pavel; Ibáñez, Carlos; Hamidovic, Daniela; Fressel, Norma; Horáček, Ivan; Karataş, Ayşegül; Karataş, Ahmet; Allegrini, Benjamin; Georgiakakis, Panagiotis; Gazaryan, Suren; Nagy, Zoltan L; Abi-Said, Mounir; Lučan, Radek K; Bartonička, Tomáš; Nicolaou, Haris; Scaravelli, Dino; Karapandža, Branko; Uhrin, Marcel; Paunović, Milan; Juste, Javier

2016-06-01

The isolation of populations in the Iberian, Italian and Balkan peninsulas during the ice ages define four main paradigms that explain much of the known distribution of intraspecific genetic diversity in Europe. In this study we investigated the phylogeography of a wide-spread bat species, the bent-winged bat, Miniopterus schreibersii around the Mediterranean basin and in the Caucasus. Environmental Niche Modeling (ENM) analysis was applied to predict both the current distribution of the species and its distribution during the last glacial maximum (LGM). The combination of genetics and ENM results suggest that the populations of M. schreibersii in Europe, the Caucasus and Anatolia went extinct during the LGM, and the refugium for the species was a relatively small area to the east of the Levantine Sea, corresponding to the Mediterranean coasts of present-day Syria, Lebanon, Israel, and northeastern and northwestern Egypt. Subsequently the species first repopulated Anatolia, diversified there, and afterwards expanded into the Caucasus, continental Europe and North Africa after the end of the LGM. The fossil record in Iberia and the ENM results indicate continuous presence of Miniopterus in this peninsula that most probably was related to the Maghrebian lineage during the LGM, which did not persist afterwards. Using our results combined with similar findings in previous studies, we propose a new paradigm explaining the general distribution of genetic diversity in Europe involving the recolonization of the continent, with the main contribution from refugial populations in Anatolia and the Middle East. The study shows how genetics and ENM approaches can complement each other in providing a more detailed picture of intraspecific evolution. Copyright © 2016 Elsevier Inc. All rights reserved.

Local Technical Resources for Development of Seismic Monitoring in Caucasus and Central Asia - GMSys2009 Data Acquisition System

NASA Astrophysics Data System (ADS)

Chkhaidze, D.; Basilaia, G.; Elashvili, M.; Shishlov, D.; Bidzinashvili, G.

2012-12-01

Caucasus and Central Asia represents regions of high seismic activity, composing a significant part of Alpine-Himalayan continental collision zone. Natural catastrophic events cause significant damage to the infrastructure worldwide, among these approximately ninety percent of the annual loss is due to earthquakes. Monitoring of Seismic Activity in these regions and adequate assessment of Seismic Hazards represents indispensible condition for safe and stable development. Existence of critical engineering constructions in the Caucasus and Central Asia such as oil and gas pipelines, high dams and nuclear power plants dramatically raises risks associated with natural hazards and eliminates necessity of proper monitoring systems. Our initial efforts were focused on areas that we are most familiar; the geophysical community in the greater Caucuses and Central Asia experiencing many of the same problems with the monitoring equipment. As a result, during the past years GMSys2009 was develop at the Institute of Earth Sciences of Ilia State University. Equipment represents a cost-effective, multifunctional Geophysical Data Acquisition System (DAS) to monitor seismic waves propagating in the earth and related geophysical parameters. Equipment best fits local requirements concerning power management, environmental protection and functionality, the same time competing commercial units available on the market. During past several years more than 30 units were assembled and what is most important installed in Georgia, Armenia, Azerbaijan and Tajikistan. GMSys2009 utilizes standard MiniSEED data format and data transmission protocols, making it possible online waveform data sharing between the neighboring Countries in the region and international community. All the mentioned installations were technically supported by the group of engineers from the Institute of Earth Sciences, on site trainings for local personnel in Armenia, Azerbaijan and Tajikistan was provided creating a good basis for successful functioning of the equipment.

Russia’s Homegrown Insurgency: Jihad in the North Caucasus

DTIC Science & Technology

2012-10-01

parliament speaker Nino Burjanadze and former Defense Minister Irakly Okruashvili, have claimed that Tbilisi has been training Ingush mujahedin and that...Burjanadze and former Defense Minister Irakly Okruashvili, have claimed that Tbilisi has been training Ingush mujahedin and that Georgian banks have

Early Neolithic wine of Georgia in the South Caucasus

PubMed Central

McGovern, Patrick; Jalabadze, Mindia; Batiuk, Stephen; Callahan, Michael P.; Smith, Karen E.; Hall, Gretchen R.; Kvavadze, Eliso; Maghradze, David; Rusishvili, Nana; Bouby, Laurent; Failla, Osvaldo; Cola, Gabriele; Mariani, Luigi; Boaretto, Elisabetta; Bacilieri, Roberto; This, Patrice; Wales, Nathan; Lordkipanidze, David

2017-01-01

Chemical analyses of ancient organic compounds absorbed into the pottery fabrics from sites in Georgia in the South Caucasus region, dating to the early Neolithic period (ca. 6,000–5,000 BC), provide the earliest biomolecular archaeological evidence for grape wine and viniculture from the Near East, at ca. 6,000–5,800 BC. The chemical findings are corroborated by climatic and environmental reconstruction, together with archaeobotanical evidence, including grape pollen, starch, and epidermal remains associated with a jar of similar type and date. The very large-capacity jars, some of the earliest pottery made in the Near East, probably served as combination fermentation, aging, and serving vessels. They are the most numerous pottery type at many sites comprising the so-called “Shulaveri-Shomutepe Culture” of the Neolithic period, which extends into western Azerbaijan and northern Armenia. The discovery of early sixth millennium BC grape wine in this region is crucial to the later history of wine in Europe and the rest of the world. PMID:29133421

Earliest human occupations at Dmanisi (Georgian Caucasus) dated to 1.85–1.78 Ma

PubMed Central

Ferring, Reid; Oms, Oriol; Agustí, Jordi; Berna, Francesco; Nioradze, Medea; Shelia, Teona; Tappen, Martha; Vekua, Abesalom; Zhvania, David; Lordkipanidze, David

2011-01-01

The early Pleistocene colonization of temperate Eurasia by Homo erectus was not only a significant biogeographic event but also a major evolutionary threshold. Dmanisi's rich collection of hominin fossils, revealing a population that was small-brained with both primitive and derived skeletal traits, has been dated to the earliest Upper Matuyama chron (ca. 1.77 Ma). Here we present archaeological and geologic evidence that push back Dmanisi's first occupations to shortly after 1.85 Ma and document repeated use of the site over the last half of the Olduvai subchron, 1.85–1.78 Ma. These discoveries show that the southern Caucasus was occupied repeatedly before Dmanisi's hominin fossil assemblage accumulated, strengthening the probability that this was part of a core area for the colonization of Eurasia. The secure age for Dmanisi's first occupations reveals that Eurasia was probably occupied before Homo erectus appears in the East African fossil record. PMID:21646521

Early Childhood Trends around the World

ERIC Educational Resources Information Center

Neugebauer, Roger

2007-01-01

This article shares the views of the members of the World Forum community regarding early childhood education trends around the world. It summarizes trends from Eastern Europe, the Caucasus, Central Asia, Denmark, The Netherlands, Italy, Turkey, Nepal, Vietnam, Tajikistan, Hong Kong, Singapore, India, New Zealand, Jordan, Palestine, Egypt,…

48 CFR 225.502 - Application.

Code of Federal Regulations, 2011 CFR

2011-10-01

... offers of end products from South Caucasus or Central and South Asian states listed in 225.401-70 the....502(b) for acquisitions subject to the World Trade Organization Government Procurement Agreement: (i) Consider only offers of U.S.-made, qualifying country, or designated country end products, except as...

48 CFR 225.502 - Application.

Code of Federal Regulations, 2012 CFR

2012-10-01

... offers of end products from South Caucasus or Central and South Asian states listed in 225.401-70 the....502(b) for acquisitions subject to the World Trade Organization Government Procurement Agreement: (i) Consider only offers of U.S.-made, qualifying country, or designated country end products, except as...

48 CFR 225.502 - Application.

Code of Federal Regulations, 2013 CFR

2013-10-01

... offers of end products from South Caucasus or Central and South Asian states listed in 225.401-70 the....502(b) for acquisitions subject to the World Trade Organization Government Procurement Agreement: (i) Consider only offers of U.S.-made, qualifying country, or designated country end products, except as...

48 CFR 225.502 - Application.

Code of Federal Regulations, 2014 CFR

2014-10-01

... offers of end products from South Caucasus or Central and South Asian states listed in 225.401-70 the....502(b) for acquisitions subject to the World Trade Organization Government Procurement Agreement: (i) Consider only offers of U.S.-made, qualifying country, or designated country end products, except as...

Reframing Marine Corps Distributed Operations and Enhanced Company Operations

DTIC Science & Technology

2009-05-21

environmental changes, particularly resource shortfalls of food and water as a result of overpopulation in developing countries and the affects of environmental...across Sub-Saharan Africa, the Middle East and the Caucasus, and through the northern parts of South Asia .‖ National Intelligence Council, ―Global

GNSS activities for crustal deformation studies in Georgia (Caucasus)

NASA Astrophysics Data System (ADS)

Khazaradze, Giorgi; Machavariani, Kakhaber; Hahubia, Galaktion; Kachakhidze-Murphy, Nino; Kachakhidze, Manana

2017-04-01

The republic of Georgia is located in the Caucasus, between the Black and Caspian seas from the west and the east, and Greater and Lesser Caucasus mountains from the north and the south. Tectonically, the region belongs to the Alpine-Himalayan collisional zone, formed during the late Cenozoic period as a result of a collision between the Arabian and Eurasian plates. The deformation zone due to this collision is broad and extends from Zagros mountains in southern Iran to the Greater Caucasus in the north. The GPS studies conducted during the last decade suggest a convergence rate of 18 mm/yr between the Arabia and Eurasia plates. Although majority of this convergence occurs in the southern part of the deformation zone, important part of this convergence occurs in Georgia, implying an elevated seismic risk in the region. This is corroborated by a presence of significant historical and instrumental earthquakes in the country. As part of the project dealing with the detection of possible low frequency electromagnetic emissions proceeding earthquakes, we have installed a continuous GNSS station MTSK between Mtskheta and Tbilisi. The station consists of Leica GRX1200 GNSS receiver with an AS10 antenna. It is mounted on top of the building, anchored to the existing brick wall. The preliminary analysis of the time-series indicates the suitability of the new station for geodynamic studies, since the preliminary data shows clean time-series with low multipath signal. We are hopeful, with time the MTSK station can provide millimeter level precisions in the velocity estimates. The analysis of the data is performed using the Gamit/Globk software package from MIT and it is processed in conjunction with 23 continuous GNSS stations of the GEO-CORS network operated by National Agency of Public Registry of Georgia (geocors.napr.gov.ge). In addition, we analyze data form the stations located on Eurasia, Arabia and Africa plates. The principle objective of the given work is to monitor millimeter level deformation of the crust due to the collision of Arabia and Eurasia tectonic plates and identify the regions of higher deformation and relate them to individual faults. This work has been partially supported by Shota Rustaveli National Science Foundation of Georgia (grant DI/21/9-140/1). We are grateful to the Andronikashvili Institute of Physics (www.aiphysics.tsu.ge) for letting us using their facility for the installation of the GNSS station.

Lithospheric velocity structure of the Anatolian plateau-Caucasus-Caspian region

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gök, R.; Mellors, R. J.; Sandvol, E.

The Anatolian plateau-Caucasus-Caspian region is an area of complex lithospheric structure accompanied by large variations in seismic wave velocities. Despite the complexity of the region, little is known about the detailed lithospheric structure. Using data from 31 new, permanent broadband seismic stations along with results from a previous 29 temporary seismic stations and 3 existing global seismic stations in the region, a 3-D velocity model is developed using joint inversion of teleseismic receiver functions and surface waves. Both group and phase dispersion curves (Love and Rayleigh) were derived from regional and teleseismic events. Additional Rayleigh wave group dispersion curves weremore » determined using ambient noise correlation. Receiver functions were calculated using P arrivals from 789 teleseismic (30°–90°) earthquakes. The stacked receiver functions and surface wave dispersion curves were jointly inverted to yield the absolute shear wave velocity to a depth of 100 km at each station. The depths of major discontinuities (sediment-basement, crust-mantle, and lithosphere-asthenosphere) were inferred from the velocity-depth profiles at the location of each station. Distinct spatial variations in crustal and upper mantle shear velocities were observed. The Kura basin showed slow (~2.7–2.9 km/s) upper crustal (0–11 km) velocities but elevated (~3.8–3.9 km/s) velocities in the lower crust. The Anatolian plateau varied from ~3.1–3.2 in the upper crust to ~3.5–3.7 in the lower crust, while velocities in the Arabian plate (south of the Bitlis suture) were slightly faster (upper crust between 3.3 and 3.4 km/s and lower crust between 3.8 and 3.9 km/s). The depth of the Moho, which was estimated from the shear velocity profiles, was 35 km in the Arabian plate and increased northward to 54 km at the southern edge of the Greater Caucasus. Moho depths in the Kura and at the edge of the Caspian showed more spatial variability but ranged between 35 and 45 km. Upper mantle velocities were slow under the Anatolian plateau but increased to the south under the Arabian plate and to the east (4.3–4.4 km/s) under the Kura basin and Greater Caucasus. The areas of slow mantle coincided with the locations of Holocene volcanoes. Differences between Rayleigh and Love dispersions at long wavelengths reveal a pronounced variation in anisotropy between the Anatolian plateau and the Kura basin.« less

Lithospheric velocity structure of the Anatolian plateau-Caucasus-Caspian region

DOE PAGES

Gök, R.; Mellors, R. J.; Sandvol, E.; ...

2011-05-07

The Anatolian plateau-Caucasus-Caspian region is an area of complex lithospheric structure accompanied by large variations in seismic wave velocities. Despite the complexity of the region, little is known about the detailed lithospheric structure. Using data from 31 new, permanent broadband seismic stations along with results from a previous 29 temporary seismic stations and 3 existing global seismic stations in the region, a 3-D velocity model is developed using joint inversion of teleseismic receiver functions and surface waves. Both group and phase dispersion curves (Love and Rayleigh) were derived from regional and teleseismic events. Additional Rayleigh wave group dispersion curves weremore » determined using ambient noise correlation. Receiver functions were calculated using P arrivals from 789 teleseismic (30°–90°) earthquakes. The stacked receiver functions and surface wave dispersion curves were jointly inverted to yield the absolute shear wave velocity to a depth of 100 km at each station. The depths of major discontinuities (sediment-basement, crust-mantle, and lithosphere-asthenosphere) were inferred from the velocity-depth profiles at the location of each station. Distinct spatial variations in crustal and upper mantle shear velocities were observed. The Kura basin showed slow (~2.7–2.9 km/s) upper crustal (0–11 km) velocities but elevated (~3.8–3.9 km/s) velocities in the lower crust. The Anatolian plateau varied from ~3.1–3.2 in the upper crust to ~3.5–3.7 in the lower crust, while velocities in the Arabian plate (south of the Bitlis suture) were slightly faster (upper crust between 3.3 and 3.4 km/s and lower crust between 3.8 and 3.9 km/s). The depth of the Moho, which was estimated from the shear velocity profiles, was 35 km in the Arabian plate and increased northward to 54 km at the southern edge of the Greater Caucasus. Moho depths in the Kura and at the edge of the Caspian showed more spatial variability but ranged between 35 and 45 km. Upper mantle velocities were slow under the Anatolian plateau but increased to the south under the Arabian plate and to the east (4.3–4.4 km/s) under the Kura basin and Greater Caucasus. The areas of slow mantle coincided with the locations of Holocene volcanoes. Differences between Rayleigh and Love dispersions at long wavelengths reveal a pronounced variation in anisotropy between the Anatolian plateau and the Kura basin.« less

High-Resolution Seismic Velocity and Attenuation Models of the Caucasus-Caspian Region

DTIC Science & Technology

2010-03-20

investigators (Table 1) along with collaborating individuals from Kandilli Observatory (Dr. Niyazai Turkelli and Ugur Teoman), Azerbaijan Seismic Survey...student ( Ugur Teoman) visited the U.S. for several months in 2008 and worked at Missouri. A Georgian scientist (Dr. Tea Godaladze) also visited at

Armenia, Azerbaijan, and Georgia: Security Issues and Implications for U.S. Interests

DTIC Science & Technology

2010-03-11

that the United States is one of several powers in the South Caucasus that, in parallel with the uncompromising stances of opposing ultra -nationalist...Azerbaijan International Oil Corporation (AIOC), formed to exploit the Azeri-Chirag- deepwater Gunashli (ACG) oil and gas fields. In 1995, Heydar Aliyev

Neotectonic stress field of the south-eastern East European platform as related to the Late Alpine collision deformation of the Greater Caucasus

NASA Astrophysics Data System (ADS)

Kopp, Mikhail L.; Kolesnichenko, Aleksei; Vassiliev, Nikita; Mostryukov, Alexandre

2013-04-01

In the south-eastern East European platform and Urals, as well as the young Scythyan platform, the Late Alpine collision deformations are widely spread. First of all, these are crumbled aulacogen covers (the Azov Sea, Dnieper-Donets, and Pachelma aulacogens). In some places the covers were dislocated conformably with platform basements but commonly they were partly detached from it with formation of inversion foldbelts (such as the Donets coal basin in the Alpine stage, Saratov and Kerensk-Chembar dislocations). Basements of some anteclises (the Voronezh, Tokmovo, and Volga-Urals ones) dividing the aulacogens were also involved into deformations. There the greatest upthrusting of basement onto cover can be observed (e.g., the Zhigouli upthrust). In general the thrusting and folding occurred during the Early Miocene-Quaternary, with its periodicity strictly corresponding to that of the Late Alpine tectonic phases in the Greater Caucasus: Early Miocene (the H. Stille,s Styrian phase), terminal Miocene-initial Pliocene (the Attic and Rhodanian phases), Eo-Pleistocene (the Valachian phase). Beside the synchronous occurrences, there are some other evidences of relation of intraplate deformations to the Arabia-Eurasa collision in its Caucasian region: (i) sublatitudinal (up to WNW-ESE strike) orientation of the intraplate upthrusts and folds, (ii) wide distribution of structurally manifested strike-slip zones as well as similarity in orientation and location between the right and left strike-slips considered with those of the Greater Caucasus: domains of the formers are built up to the north the domains of the latters, (iii) directed southward increasing basement involvement into the neotectonic deformations. For example, in the Donets-Azov region a basement neotectonic megafold was imposed not only onto Donets Herzinian foldbelt but also on the Precambrian basement of the Rostov high of the Ukrainian shield. To some extent, this megafold resembles a northern wing of the Greater Caucasian orogen built by an actived basement of the Scythyan plate. Signs of influence of collisional pressure onto intraplate deformations are also demonstrated by the Cenozoic stress/deformation field studied by the authors by means of mesotectonic measurements of tectonic striation, slickensides and veins in the Upper Mesozoic-Quaternary rocks. As a result, a series of maps of the Cenozoic stress field of the area studied has been first computered. The maps show an orientation and dip of general normal and tangential tectonic stresses as well as a character of a stress regime type (compression, extension, or horizontal shear) determined with the Lode-Nadai coefficient. A combination of the macrotectonic and mesotectonic data allows the following conclusions on dynamics of the platform neotectonic structures formation. (1) In the southern part of the studied platform area (the Zhigouli, Saratov and Kerensk-Chembar dislocations, and Donets coal basin in the Alpine stage), formation of the structures was greatly affected by increasing toward the Greater Caucasus compression in the thrust and strike-slip stress regimes. Horizontal projections of a compression axis in all these areas are oriented submeridionally (up to NE-SW) whereas horizontal projections of an extension axis are oriented sublatitudinally (up to WSW-ESE)). (2) The compression is also growing eastward, to the Uralian-Mougodjary recent orogen but its axis is directed there sublatitudinally, with the extension axis orienting submeridionally. (3) In the right angle between mutually perpendicular domains: the southern (adjacent to the Caucasus) and eastern ("the Uralian") ones, a domain of horizontal extension is present; its axis was oriented both sublatitudinally and submeridionally. In topography this area represents a vast depression, with its centre approximately marked by the point of a confluence of Kama with Volga, the greatest rivers of the Russian plain. There the collision (?) compression also took place but it was only slightly pronounced in the surface (for example, deep-seated folds of the Vyatka dislocations) and, besides, had a stronger disperse in axis orientation. Some prevalence of the NW-SE axis orientation allows conclusion that such compression strike was a result of a geometric composition of two mutually perpendicular vectors of pressure directed from the Greater Caucasus and the Urals. (4) All the results listed above indicate to an essential role of far collision stresses in the formation of the neotectonic structure of the studied platform territory. The collision pressure came predominantly from the Greater Caucasus belonged to the Peri-Arabian collision area as well as from the recent Urals representing presumably the north-eastern "outpost" of the Peri-Indian collision area. (5) Several discrepancies in the macro- and mesotectonic data in relation of effect of the compression and extension on formation of every platform neostructure (the formers point to more compression environment) are consistent with the idea that these far collision stresses passed at the depth through the consolidated crust whereas upwards (to the earth surface) the collision stresses were partially scattered in the platform cover.

Russia’s National Interests Towards the Caucasus: Implications for Georgian Sovereignty

DTIC Science & Technology

2004-06-01

www.eurasianet.org/departments/insight/articles/eav021204.shtml>. Accessed June 1, 2004; Irakly Areshidze, “Did Russia and Georgia make a deal over Ajaria?” Open...1996. Internal Factors in Russian Foreign Policy. Oxford: Oxford University Press. Areshidze, Irakly . “Did Russia and Georgia make a deal over Ajaria

Geographic variation in the effects of disturbance, fungi, insects, and resilience on the abundance of a globally distributed plant

USDA-ARS?s Scientific Manuscript database

Aim: To assess the effects of disturbance, fungi, insects, and resilience on the abundance of a globally distributed ruderal, Centaurea solstitialis, in two regions with contrasting conditions within both native and non-native ranges. Location: The Caucasus (Georgia and Armenia) and south-western...

Characterizing Betula litwinowii seedling microsites at the alpine-treeline ecotone, central Greater Caucasus Mountains, Georgia

Treesearch

Nicole M Hughes; Daniel M. Johnson; Maia Akhalkatsi; Otar Abdaladze

2009-01-01

Seedling establishment is an important factor dictating the altitudinal limits of treeline species. Factors that affect seedling mortality and survival, however, have yet to be fully characterized, especially for deciduous treeline species. Here we describe microsite characteristics of successfully established Betula litwinowii seedlings at the...

Dreyfusia nordmannianae in Northern and Central Europe: potential for biological control and comments on its taxonomy

Treesearch

H.P. Ravn; N.P. Havill; S. Akbulut; R.G. Foottit; M. Serin; M. Erdem; S. Mutun; M. Kenis

2013-01-01

The silver fir woolly adelgid, Dreyfusia nordmannianae, is the most severe pest occurring on Abies nordmanniana in Central and Northern Europe. The adelgid is particularly damaging to trees in Christmas tree plantations. Dreyfusia nordmannianae is native to the Caucasus region and alien to Europe, where its...

Genetic diversity of medlar (Mespilus germanica) germplasm using microsatellite markers

USDA-ARS?s Scientific Manuscript database

The medlar (Mespilus germanica) is a pome fruit related to pear (Pyrus sp.) and hawthorn (Crataegus sp.) that has been cultivated for many centuries for its edible fruit. It was also an important medicinal plant in the Middle Ages. The center of origin for Mespilus is the Trans-Caucasus region and t...

Late Vendian Complexes in the Structure of Metamorphic Basement of the Fore Range Zone, Greater Caucasus

NASA Astrophysics Data System (ADS)

Kamzolkin, V. A.; Latyshev, A. V.; Vidyapin, Yu. P.; Somin, M. L.; Smul'skaya, A. I.; Ivanov, S. D.

2018-05-01

The paper presents new data on the composition, age, and relationships (with host and overlying deposits) of intrusive rocks in the basement of the Fore Range zone (Greater Caucasus), in the Malaya Laba River Basin. The evolutionary features of intrusive units located within the Blyb metamorphic complex are described. It is shown for the first time that the lower levels of this complex are, in a structural sense, outcrops of the Late Vendian basement. The basement is composed of the Balkan Formation and a massif of quartz metadiorites that intrudes it; for the rocks of this massif, ages ranging from 549 ± 7.4 to 574.1 ± 6.7 Ma are obtained for three U-Pb datings by the SHRIMP-II method. The Herzyinan magmatic event is represented by a group of granodiorite intrusions penetrating the Blyb complex on a series of faults extending along its boundary with the Main Range zone. The obtained estimate for the U-Pb age of one of the intrusions (319 ± 3.8 Ma) corresponds to the end of the Serpukhovian stage of the Early Carboniferous.

The 2012 Strike-slip Earthquake Sequence in Black Sea and its Link to the Caucasus Collision Zone

NASA Astrophysics Data System (ADS)

Tseng, T. L.; Hsu, C. H.; Legendre, C. P.; Jian, P. R.; Huang, B. S.; Karakhanian, A.; Chen, C. W.

2016-12-01

The Black Sea formed as a back-arc basin in Late Cretaceous to Paleogene with lots of extensional features. However, the Black Sea is now tectonically stable and absent of notable earthquakes except for the coastal region. In this study we invert regional waveforms of a new seismic array to constrain the focal mechanisms and depths of the 2012/12/23 earthquake sequence occurred in northeastern Black Sea basin that can provide unique estimates on the stress field in the region. The results show that the focal mechanisms for the main shock and 5 larger aftershocks are all strike-slip faulting and resembling with each other. The main rupture fall along the vertical dipping, NW-SE trending sinistral fault indicated by the lineation of most aftershocks. The fault strike and aftershock distribution are both consistent with the Shatsky Ridge, which is continental in nature but large normal faults was created by previous subsidence. The occurrence of 2012 earthquakes can be re-activated, as strike-slip, on one of the pre-existing normal fault cutting at depth nearly 20-30 km in the extended crust. Some of the aftershocks, including a larger one occurred 5 days later, are distributed toward NE direction 20 km away from main fault zone. Those events might be triggered by the main shock along a conjugate fault, which is surprisingly at the extension of proposed transform fault perpendicular to the rift axis of eastern Black Sea Basin. The focal mechanisms also indicate that the maximum compression in northeast Black Sea is at E-W direction, completely different from the N-S compression in the Caucasus and East Turkey controlled by Arabia-Eurasia collision. The origin of E-W maximum compression is probably the same as the secondary stress inferred from earthquakes in Racha region of the Greater Caucasus.

The pattern of deep structure and recent tectonics of the Greater Caucasus in the Ossetian sector from the complex geophysical data

NASA Astrophysics Data System (ADS)

Gorbatikov, A. V.; Rogozhin, E. A.; Stepanova, M. Yu.; Kharazova, Yu. V.; Andreeva, N. V.; Perederin, F. V.; Zaalishvili, V. B.; Mel'kov, D. A.; Dzeranov, B. V.; Dzeboev, B. A.; Gabaraev, A. F.

2015-01-01

Microseismic sounding along the profile in the Ossetian sector of the Greater Caucasus revealed two domains with characteristic properties and morphology deep beneath the mountain system. One subvertical domain is marked with low velocities and the other, also subvertical, has high velocities. The high-velocity zone is largely located beneath the northern limb and axial part of the Greater Caucasus mega-anticlinorium, whereas the low velocity zone projects on the southern limb. Almost throughout the entire structure of the block part of the northern limb of mega-anticlinorium, the top of the high-velocity zone beneath it is consistently horizontal at a depth of ˜10 km. This pattern is violated by the apparent steep rise of the top of the high-velocity zone to the surface in the southern direction, which starts approximately from the main thrust. Beneath the southern limb, the top boundary can also be guessed at a depth of ˜10 km, although less reliably. The roots of the low-velocity zone stretch to a depth of ˜50-60 km and narrow with the depth. The weak regional seismicity quite distinctly maps onto the high-velocity zone. In the depth interval of 10 to 25 km, weak seismicity abruptly drops northwards at the transition to the low-velocity zone. The independent magnetotelluric data show that electric resistivity of the low-velocity zone significantly exceeds the resistivity of the hosting rocks. The model of a medium filled with isolated fractures with mineralized fluid is suggested for the low-velocity zone. According to a series of features, the low-velocity zone tends to float up; in particular, there is a high lateral correlation between the most elevated part of the mountain relief, morphology, and age of the rocks, on one hand, and the position of the low-velocity zone, on the other hand.

Plate tectonic evolution of the southern margin of Eurasia in the Mesozoic and Cenozoic

NASA Astrophysics Data System (ADS)

Golonka, J.

2004-03-01

Thirteen time interval maps were constructed, which depict the Triassic to Neogene plate tectonic configuration, paleogeography and general lithofacies of the southern margin of Eurasia. The aim of this paper is to provide an outline of the geodynamic evolution and position of the major tectonic elements of the area within a global framework. The Hercynian Orogeny was completed by the collision of Gondwana and Laurussia, whereas the Tethys Ocean formed the embayment between the Eurasian and Gondwanian branches of Pangea. During Late Triassic-Early Jurassic times, several microplates were sutured to the Eurasian margin, closing the Paleotethys Ocean. A Jurassic-Cretaceous north-dipping subduction boundary was developed along this new continental margin south of the Pontides, Transcaucasus and Iranian plates. The subduction zone trench-pulling effect caused rifting, creating the back-arc basin of the Greater Caucasus-proto South Caspian Sea, which achieved its maximum width during the Late Cretaceous. In the western Tethys, separation of Eurasia from Gondwana resulted in the formation of the Ligurian-Penninic-Pieniny-Magura Ocean (Alpine Tethys) as an extension of Middle Atlantic system and a part of the Pangean breakup tectonic system. During Late Jurassic-Early Cretaceous times, the Outer Carpathian rift developed. The opening of the western Black Sea occurred by rifting and drifting of the western-central Pontides away from the Moesian and Scythian platforms of Eurasia during the Early Cretaceous-Cenomanian. The latest Cretaceous-Paleogene was the time of the closure of the Ligurian-Pieniny Ocean. Adria-Alcapa terranes continued their northward movement during Eocene-Early Miocene times. Their oblique collision with the North European plate led to the development of the accretionary wedge of the Outer Carpathians and its foreland basin. The formation of the West Carpathian thrusts was completed by the Miocene. The thrust front was still propagating eastwards in the eastern Carpathians. During the Late Cretaceous, the Lesser Caucasus, Sanandaj-Sirjan and Makran plates were sutured to the Iranian-Afghanistan plates in the Caucasus-Caspian Sea area. A north-dipping subduction zone jumped during Paleogene to the Scythian-Turan Platform. The Shatski terrane moved northward, closing the Greater Caucasus Basin and opening the eastern Black Sea. The South Caspian underwent reorganization during Oligocene-Neogene times. The southwestern part of the South Caspian Basin was reopened, while the northwestern part was gradually reduced in size. The collision of India and the Lut plate with Eurasia caused the deformation of Central Asia and created a system of NW-SE wrench faults. The remnants of Jurassic-Cretaceous back-arc systems, oceanic and attenuated crust, as well as Tertiary oceanic and attenuated crust were locked between adjacent continental plates and orogenic systems.

Project-Based Method as an Effective Means of Interdisciplinary Interaction While Teaching a Foreign Language

ERIC Educational Resources Information Center

Bondar, Irina Alekseevna; Kulbakova, Renata Ivanovna; Svintorzhitskaja, Irina Andreevna; Pilat, Larisa Pavlovna; Zavrumov, Zaur Aslanovich

2016-01-01

The article explains how to use a project-based method as an effective means of interdisciplinary interaction when teaching a foreign language on the example of The Institute of service, tourism and design (branch) of the North Caucasus Federal University (Pyatigorsk, Stavropol Territory Russia). The article holds the main objectives of the…

Education, Nation-Building and Modernization after World War I: American Ideas for the Peace Conference

ERIC Educational Resources Information Center

Ment, David M.

2005-01-01

The First World War ended with the collapse of the Austro-Hungarian, Russian, German and Ottoman Empires. In planning for the peace negotiations the allied governments considered not only the European boundaries but especially the national aspirations and future development of the peoples of the Balkans, the Caucasus, the Middle East, Africa and…

Analysis of the genetic diversity and structure of cultivated and wild grapevine (Vitis vinifera L.) accessions around the Mediterranean basin and Central Asia regions.

USDA-ARS?s Scientific Manuscript database

Background: The mountainous region between the Caucasus and China is considered to be the center of diversity for many temperate fruit crops including grapevine (Vitis vinifera subsp. sativa L). The wild forms of the subsp. Vitis vinifera spp. sylvestris, cultivated and ancient local varieties, were...

High-Resolution Seismic Velocity and Attenuation Models of the Caucasus-Caspian Region

DTIC Science & Technology

2008-09-30

Skobeltsyn, 1010 Ugur Teoman , Tea Godoladze’, and Eric Sandvol’ 5e. TASK NUMBERSM 5f. WORK UNIT NUMBER Al 7. PERFORMING ORGANIZATION NAME(S) AND ADDRESS...CASPIAN REGION Robert Mellors’, Rengin G6k2 , Michael Pasyanos 2, Gleb Skobeltsyn 3, Ugur Teoman4, Tea Godoladze 5 , and Eric Sandvol 3 San Diego

Teachers' Attitudes toward Assessment of Student Learning and Teacher Assessment Practices in General Educational Institutions: The Case of Georgia

ERIC Educational Resources Information Center

Kitiashvili, Anastasia

2014-01-01

The aim of this article is to study teachers' attitudes toward assessment of students' learning and their assessment practices in Georgia's general educational institutions. Georgia is a country in the South Caucasus with a population of 4.5 million people, with 2300 general educational institutions and about 559,400 students. The research…

Security Cooperation Activities: Strengthening a Partner Military and its Governing Institutions

DTIC Science & Technology

2016-05-26

governments suffered from economic instability , corruption, poor rule of law, and low administration of justice. Government and economic stability ...types of programs applied. Conditions defining allied state characteristics are military structure, government polity rating, and economic stability ...regional instability . Dr. Michael Mihalka and Mr. Mark Wilcox covered the trends in liberal democracy in the South Caucasus in light of economic

Monsoma pulveratum (Hymenoptera: Tenthredinidae: Allantinae), a palaearctic sawfly defoliator of alder in Alaska and new to the United States

Treesearch

James J. Kruse; David R. Smith; Nathan M. Schiff

2010-01-01

Smith and Goulet (2000) gave the first North American records of Monsoma pulveratum (Retzius) from Newfoundland, Canada, in 1991 and 1998 and compared it with the only native species of the genus, M. inferentia (Norton). It is native to Europe, northern Africa, and Turkey to the Caucasus (Benson 1968, Lacourt 1975).

Educational Film Guide for Middle Eastern Studies.

ERIC Educational Resources Information Center

Greenman, Joseph; Joachim, Ann

This annotated guide lists 16mm. films on the Middle East for use in grades K-12 and with adults. The Middle East refers to a vast area extending from eastern Afghanistan and the northern Caucasus to the western coast of Morocco and the southern periphery of the Sahara. The guide does not list films according to their merits. Rather, it includes…

Challenges to Creating Vibrant Media Education in Young Democracies: Accreditation for Media Schools in Georgia

ERIC Educational Resources Information Center

Gersamia, Mariam; Freedman, Eric

2017-01-01

Since achieving independence in 1991, the Republic of Georgia has made significant progress with democratization and now has what is considered the freest, most independent, and most diverse press among the ex-Soviet Caucasus and Central Asian countries. Improvements have been made in the quality of journalism education as part of a national…

Genetic HLA Study of Kurds in Iraq, Iran and Tbilisi (Caucasus, Georgia): Relatedness and Medical Implications.

PubMed

Arnaiz-Villena, Antonio; Palacio-Grüber, Jose; Muñiz, Ester; Campos, Cristina; Alonso-Rubio, Javier; Gomez-Casado, Eduardo; Salih, Shadallah Fareq; Martin-Villa, Manuel; Al-Qadi, Rawand

2017-01-01

Kurds from Iraq (Dohuk and Erbil Area, North Iraq) have been analyzed for HLA genes. Their HLA genetic profile has been compared with that of other Kurd groups from Iran and Tbilisi (Georgia, Caucasus) and also Worldwide populations. A total of 7,746 HLA chromosomes have been used. Genetic distances, NJ dendrograms and correspondence analyses have been carried out. Haplotype HLA-B*52-DRB1*15 is present in all three analyzed Kurd populations. HLA-A*02-B*51-DRB1*11 is present in Iraq and Georgia Kurds. Haplotypes common to Iran and Iraq Kurds are HLA DRB1*11-DQB1*03, HLA DRB1*03-DQB1*02 and others in a lower frequency. Our HLA study conclusions are that Kurds most probably belong to an ancient Mediterranean / Middle East / Caucasian genetic substratum and that present results and those previously obtained by us in Kurds may be useful for Medicine in future Kurd transplantation programs, HLA Epidemiology (HLA linked diseases) and Pharmacogenomics (HLA-associated drug side effects) and also for Anthropology. It is discussed that one of the most ancient Kurd ancestor groups is in Hurrians (2,000 years BC).

Risk assessment in the North Caucasus ski resorts

NASA Astrophysics Data System (ADS)

Komarov, Anton Y.; Seliverstov, Yury G.; Glazovskaya, Tatyana G.; Turchaninova, Alla S.

2016-10-01

Avalanches pose a significant problem in most mountain regions of Russia. The constant growth of economic activity, and therefore the increased avalanche hazard, in the North Caucasus region lead to demand for the development of large-scale avalanche risk assessment methods. Such methods are needed for the determination of appropriate avalanche protection measures as well as for economic assessments.The requirement of natural hazard risk assessments is determined by the Federal Law of the Russian Federation (Federal Law 21.12.1994 N 68-FZ, 2016). However, Russian guidelines (SNIP 11-02-96, 2013; SNIP 22-02-2003, 2012) are not clearly presented concerning avalanche risk assessment calculations. Thus, we discuss these problems by presenting a new avalanche risk assessment approach, with the example of developing but poorly researched ski resort areas. The suggested method includes the formulas to calculate collective and individual avalanche risk. The results of risk analysis are shown in quantitative data that can be used to determine levels of avalanche risk (appropriate, acceptable and inappropriate) and to suggest methods to decrease the individual risk to an acceptable level or better. The analysis makes it possible to compare risk quantitative data obtained from different regions, analyze them and evaluate the economic feasibility of protection measures.

Genetic HLA Study of Kurds in Iraq, Iran and Tbilisi (Caucasus, Georgia): Relatedness and Medical Implications

PubMed Central

Muñiz, Ester; Campos, Cristina; Alonso-Rubio, Javier; Gomez-Casado, Eduardo; Salih, Shadallah Fareq; Martin-Villa, Manuel; Al-Qadi, Rawand

2017-01-01

Kurds from Iraq (Dohuk and Erbil Area, North Iraq) have been analyzed for HLA genes. Their HLA genetic profile has been compared with that of other Kurd groups from Iran and Tbilisi (Georgia, Caucasus) and also Worldwide populations. A total of 7,746 HLA chromosomes have been used. Genetic distances, NJ dendrograms and correspondence analyses have been carried out. Haplotype HLA-B*52—DRB1*15 is present in all three analyzed Kurd populations. HLA-A*02-B*51-DRB1*11 is present in Iraq and Georgia Kurds. Haplotypes common to Iran and Iraq Kurds are HLA DRB1*11—DQB1*03, HLA DRB1*03—DQB1*02 and others in a lower frequency. Our HLA study conclusions are that Kurds most probably belong to an ancient Mediterranean / Middle East / Caucasian genetic substratum and that present results and those previously obtained by us in Kurds may be useful for Medicine in future Kurd transplantation programs, HLA Epidemiology (HLA linked diseases) and Pharmacogenomics (HLA-associated drug side effects) and also for Anthropology. It is discussed that one of the most ancient Kurd ancestor groups is in Hurrians (2,000 years BC). PMID:28114347

Thorium Energy Resources and its Potential of Georgian Republic, The Caucasus

NASA Astrophysics Data System (ADS)

Gogoladze, Salome; Okrostsvaridze, Avtandil

2017-04-01

Energy resources, currently consumed by modern civilization, are represented by hydrocarbons - 78-80 %, however these reserves are exhausting. In light of these challenges, search of new energy resources is vital importance problem for the modern civilization. Based on the analysis of existing energy reserves and potential, as the main energy resources for the future of our civilization, the renewable and nuclear energy should be considered. However, thorium has a number of advantages compared to Uranium (Kazimi, 2003; et al.): It is concentrated in the earth crust 4-5 times more than uranium; extraction and enrichment of thorium is much cheaper than uranium's; It is less radioactive; complete destruction of its waste products is possible; thorium yields much more energy than uranium. Because of unique properties and currently existed difficult energetic situation thorium is considered as the main green energy resource in the 3rd millennium of the human civilization (Martin, 2009). Georgia republic, which is situated in the central part of Caucasus, poor of hydrocarbons, but has a thorium resource important potential. In general the Caucasus represents a collisional orogen, that formed along the Eurasian North continental margin and extends over 1200 km from Caspian to Black Sea. Three major units are distinguished in its construction: the Greater and Lesser Caucasian mobile belts and the Transcaucasus microplate. Currently it represents the Tethyan segment connecting the Mediterranean and Iran-Himalayan orogenic belts, between the Gondvana-derived Arabian plate and East European platform. Now in Georgian Republic are marked thorium four ore occurrences (Okrostsvaridze, 2014): 1- in the Sothern slope of the Greater Caucasus, in the quartz -plagioclases veins (Th concentrations vary between 51g/t - 3882 g/t); 2- in the Transcaucasus Dzirula massif hydrothermally altered rocks of the Precambrian quartz-diorite gneisses (Th concentrations vary between 117 g/t -266 g/t); 3- in magnetite ore bodies of Vakijvari ore field (Th concentrations vary between 185 g/t - 1600 g/t); 4- in the black sand (magnetite sand) of the Black Sea Guria region coast (Th concentrations vary between 200 g/t - 450 g/t). Based on these data and on the correlation of these information on the other thorium deposit of the world, the Georgian thorium ore occurrences should be treated as a prospective objects. Because of this, we consider that complex investigation of thorium resources of Georgia should be included into the sphere of strategic interests of the state. REFERENCES Martin R., 2009. "Uranium is So Last Centure - Enter Thorium , the New Green Nuke", Weird Magazine, Dec. 21. Kazimi M. S., 2003. "Thorium fuel for nuclear energy", American Scientist, 91, pp. 305-313. Okrostsvaridze A. V., 2014. Torium - Future Energy of Modern Civilization? and its Ore Occurrences in Georgia Republic. Bull.Georg. Natl. Acad. Sci., vol. 8., no 3, pp. 48-55.

Metallothionein Isoform Expression in Benign and Malignant Thyroid Lesions.

PubMed

Wojtczak, Beata; Pula, Bartosz; Gomulkiewicz, Agnieszka; Olbromski, Mateusz; Podhorska-Okolow, Marzena; Domoslawski, Paweł; Bolanowski, Marek; Daroszewski, Jacek; Dziegiel, Piotr

2017-09-01

Metallothioneins (MTs) are involved in numerous cell processes such as binding and transport of zinc and copper ions, differentiation, proliferation and apoptosis, therefore contributing to carcinogenesis. Scarce data exist on their expression in benign and malignant lesions of the thyroid. mRNA expression of functional isoforms of MT genes (MT1A, MT1B, MT1E, MT1F, MT1G, MT1H, MT1X, MT2A, MT4) was studied in 17 nodular goiters (NG), 12 follicular adenomas (FA) and 26 papillary thyroid carcinomas (PTC). One-way ANOVA revealed significant differences in mRNA expression levels of MT1A (p<0.05), MT1E (p<0.005), MT1F (p<0.0001), MT1G (p<0.005), MT1X (p<0.0005) and MT2A (p<0.005) in the analyzed samples. Post hoc analysis confirmed a significantly lower expression of MT1A mRNA in PTC compared to NG (p<0.05). Significant down-regulation was also noted for other MT isoforms in PTC in comparison to NG: MT1E (p<0.05), MT1F (p<0.0001), MT1G (p<0.005), MT1X (p<0.0005) and MT2A (p<0.05). In addition, significant down-regulation of MT1F and MT1G in FA compared to NG was observed (p<0.005 and p<0.05, respectively). Expression of functional MT isoforms may contribute to thyroid carcinogenesis and potentially serve as a diagnostic marker in distinguishing benign and malignant lesions. Copyright© 2017, International Institute of Anticancer Research (Dr. George J. Delinasios), All rights reserved.

Atrazine sorption by hydroxy-interlayered clays and their organic complexes.

PubMed

Indraratne, Srimathie P; Farenhorst, Annemieke; Goh, Tee Boon

2008-01-01

This study examined the sorption of atrazine by hydroxy-Fe interlayered montmorillonite (FeMt) and its hydroquinone (FeMtHQ), citrate (FeMtCt) and catechol (FeMtCC) complexes as well as by hydroxy-Al interlayered montmorillonite (AlMt) and its hydroquinone (AlMtHQ) and citrate (AlMtCt) complexes. Found among the clays were sorption distribution coefficients (K(d)) ranging from 24 to 123 mL g(-1) and maximum sorption (M) ranging from 2.2 to 16.8 microg g(-1). Both K(d) and M decreased in the order of FeMtCC > FeMtHQ > AlMtHQ > (AlMt = FeMt) > (AlMtCt = FeMtCt). The pH was negatively correlated with both K(d) (r = -0.90, p < 0.001) and M (r = -0.81, p < 0.001). When interlayered clays were associated with humified material (FeMtCC, FeMtHQ, AlMtHQ), both K(d) (r > 0.96, p < 0.01) and M (r > 0.94, p < 0.01) were highly positively correlated with total organic C and alkali-soluble C. However, clays with non-humified organic compounds (FeMtCt and AlMtCt) sorbed less atrazine than clays without any organic C (FeMt and AlMt). This suggests that functional groups of Fe-OH and Al-OH in FeMt and AlMt reduced the available sorption sites for atrazine by making complexes with citrate ions while forming FeMtCt and AlMtCt. The atrazine was sorbed through the hydrophobic interactions with organic compound surfaces as well as through H-bonding and ionic bonding with clay-mineral surfaces.

The MtDMI2-MtPUB2 Negative Feedback Loop Plays a Role in Nodulation Homeostasis1[OPEN

PubMed Central

Deng, Jie; Zhu, Fugui; Lu, Zheng

2018-01-01

DOES NOT MAKE INFECTION 2 (MtDMI2) is a Leu rich repeat-type receptor kinase required for signal transduction in the Medicago truncatula/Sinorhizobium meliloti symbiosis pathway. However, the mechanisms through which MtDMI2 participates in nodulation homeostasis are poorly understood. In this study, we identified MtPUB2—a novel plant U-box (PUB)–type E3 ligase—and showed that it interacts with MtDMI2. MtDMI2 and MtPUB2 accumulation were shown to be similar in various tissues. Roots of plants in which MtPUB2 was silenced by RNAi (MtPUB2-RNAi plants) exhibited impaired infection threads, fewer nodules, and shorter primary root lengths compared to those of control plants transformed with empty vector. Using liquid chromatography-tandem mass spectrometry, we showed that MtDMI2 phosphorylates MtPUB2 at Ser-316, Ser-421, and Thr-488 residues. When MtPUB2-RNAi plants were transformed with MtPUB2S421D, which mimics the phosphorylated state, MtDMI2 was persistently ubiquitinated and degraded by MtPUB2S421D, resulting in fewer nodules than observed in MtPUB2/MtPUB2-RNAi-complemented plants. However, MtPUB2S421A/MtPUB2-RNAi-complemented plants showed no MtPUB2 ubiquitination activity, and their nodulation phenotype was similar to that of MtPUB2-RNAi plants transformed with empty vector. Further studies demonstrated that these proteins form a negative feedback loop of the prey (MtDMI2)-predator (MtPUB2) type. Our results suggest that the MtDMI2-MtPUB2 negative feedback loop, which displays crosstalk with the long-distance autoregulation of nodulation via MtNIN, plays an important role in nodulation homeostasis. PMID:29440269

Low Birth Weight: A Descriptive Study of Risk Factors

DTIC Science & Technology

1999-01-07

abruption Dx on admit MT Placenta previa Yes Placenta previa Dx complete/partial MT Smoking Yes Tobacco use this pregnancy MT Heavy alcohol use Yes...Multiple Gestation MT Urinary tract infection MT *Anemia MT Fetal anomalies MT Abruptio placentae MT Placenta previa MT Smoking MT Alcohol use...categories: (a) problems with the placenta , (b) problems with the pregnant woman herself, (c) problems with the fetus itself, or (d) any

Central Asia: Regional Developments and Implications for U.S. Interests

DTIC Science & Technology

2012-05-18

Representatives, Committee on International Relations, Subcommittee on the Middle East and Central Asia, Assessing Energy and Security Issues in Central Asia...Akiner, Violence in Andijon, 13 May 2005: An Independent Assessment , Central Asia-Caucasus Institute, July 2005; AbduMannob Polat, Reassessing Andijan...observers warn that Islamic extremism could increase dramatically in the region, others discount the risk that the existing secular governments soon

The Chechen Conflict: A Case for U.S. Intervention

DTIC Science & Technology

2006-05-01

In other instances, authors use the terms interchangeably due to the difficulty in defining the evolving nature of the Chechen resistance . Unless...and continue to drive the Chechen people to resist Russian rule. Geography Chechnya is located in the North Caucasus in southwestern Russia. The...contrast, repelled every Russian effort to enter Chechnya; at least until 1791 when Catherine the Great quelled the Chechen resistance movement

Turkish Influence in the South Caucasus and Levant: The Consequences for NATO and the EU

DTIC Science & Technology

2013-09-01

and Contemporary Context: “Frozen Conflicts” And Caspian Energy ..........................................................................22  2...by the waning fortunes of the western allies in their variety and complexity. Washington is shifting strategic resources and political energy to the...East energy .2 In both NATO and EU strategic documents energy is defined as an important element in European security. NATO’s Strategic Concept 2010

Thumping the Hive: Russian Neocortical Warfare in Chechnya

DTIC Science & Technology

2004-09-01

against the determined, resourceful Muslim tribes of the mountains and forests of the Central Caucasus, Russia’s military forces compiled a frustrating...warfare against minds and envisioning weapons as any means used to change the enemy’s will.” The merging of these two hemispheric approaches produces... single adviser in the Soviet system 40 Ibid., 5. 41 Szafranski, 409. 19 can allow himself to

Did the Basement-Involved Main Caucasus Thrust Form during the Cenozoic Arabia-Eurasia Collision?

NASA Astrophysics Data System (ADS)

Vasey, D. A.; Cowgill, E.; Niemi, N. A.; Godoladze, T.; Javakhishvili, Z.; Skhirtladze, I.; Boichenko, G.

2017-12-01

The Greater Caucasus Mountains lie between the Black and Caspian Seas at the northern margin of the active Arabia-Eurasia collision zone. The north-dipping Main Caucasus Thrust (MCT) is commonly assumed to be a first-order structure within the range that places Paleozoic crystalline basement to the north over metasedimentary cover of inferred Mesozoic age to the south. Although most workers assume this juxtaposition occurred during Cenozoic growth of the range, the timing of ductile (quartz-plastic) shearing along the MCT remains to be established. Here, we present data to discriminate between two competing models of quartz-plastic deformation along the proposed MCT location at the basement-cover contact. In the first model, quartz-plastic deformation occurred during the Cenozoic Arabia-Eurasia collision, whereas in the second, this deformation took place during an older orogenic event, such as the Paleozoic Variscan orogeny. To test these models, we are combining field observations, microstructural investigations, and thermochronologic analyses on two 10 km-long traverses in the Republic of Georgia, separated by 200 km along strike, across the MCT. Our fieldwork and microstructural analyses along the basement-cover contact document north-dipping zones of high strain that are 100 m thick and show quartz-plastic deformation, top-to-the-south shear sense, and greenschist-facies metamorphism. Zircon (U-Th)/He (ZHe) analyses along the eastern traverse near Stepantsminda yielded latest Miocene ( 7-8 Ma) ages in both the MCT shear zone and 150 m structurally above the MCT. In contrast, along the western traverse near Nakra, a sample 300 m structurally below the MCT yielded an early Oligocene ( 31 Ma) ZHe age. These data require Cenozoic exhumation from temperatures >180° and are compatible with recent ductile shear along the MCT. However, results from biotite and muscovite 40Ar/39Ar analyses in progress are needed to confirm this hypothesis. The MCT appears to have exhumed rocks from crustal depths of at least 6 km since the Oligocene and may be a key first-order structure in the Arabia-Eurasia collision.

A European Concern? Genetic Structure and Expansion of Golden Jackals (Canis aureus) in Europe and the Caucasus

PubMed Central

Rutkowski, Robert; Krofel, Miha; Giannatos, Giorgos; Ćirović, Duško; Männil, Peep; Volokh, Anatoliy M.; Lanszki, József; Heltai, Miklós; Szabó, László; Banea, Ovidiu C.; Yavruyan, Eduard; Hayrapetyan, Vahram; Kopaliani, Natia; Miliou, Anastasia; Tryfonopoulos, George A.; Lymberakis, Petros; Penezić, Aleksandra; Pakeltytė, Giedrė; Suchecka, Ewa; Bogdanowicz, Wiesław

2015-01-01

In the first continent-wide study of the golden jackal (Canis aureus), we characterised its population genetic structure and attempted to identify the origin of European populations. This provided a unique insight into genetic characteristics of a native carnivore population with rapid large-scale expansion. We analysed 15 microsatellite markers and a 406 base-pair fragment of the mitochondrial control region. Bayesian-based and principal components methods were applied to evaluate whether the geographical grouping of samples corresponded with genetic groups. Our analysis revealed low levels of genetic diversity, reflecting the unique history of the golden jackal among Europe’s native carnivores. The results suggest ongoing gene flow between south-eastern Europe and the Caucasus, with both contributing to the Baltic population, which appeared only recently. The population from the Peloponnese Peninsula in southern Greece forms a common genetic cluster with samples from south-eastern Europe (ΔK approach in STRUCTURE, Principal Components Analysis [PCA]), although the results based on BAPS and the estimated likelihood in STRUCTURE indicate that Peloponnesian jackals may represent a distinct population. Moreover, analyses of population structure also suggest either genetic distinctiveness of the island population from Samos near the coast of Asia Minor (BAPS, most STRUCTURE, PCA), or possibly its connection with the Caucasus population (one analysis in STRUCTURE). We speculate from our results that ancient Mediterranean jackal populations have persisted to the present day, and have merged with jackals colonising from Asia. These data also suggest that new populations of the golden jackal may be founded by long-distance dispersal, and thus should not be treated as an invasive alien species, i.e. an organism that is “non-native to an ecosystem, and which may cause economic or environmental harm or adversely affect human health”. These insights into the genetic structure and ancestry of Baltic jackals have important implications for management and conservation of jackals in Europe. The golden jackal is listed as an Annex V species in the EU Habitats Directive and as such, considering also the results presented here, should be legally protected in all EU member states. PMID:26540195

Oak ecosystem succession of the Northern Caucasus

NASA Astrophysics Data System (ADS)

Chalaya, Elena; Slepykh, Victor; Efimenko, Natalia; Povolotskaya, Nina

2014-05-01

English oak (Quercus robur L.) along with its well-known good properties has a high sanitary-hygienic and curative potential. Its volatile metabolites (VM) influence bacteriostatically Staphylococcus aureus 209r, oppressing it in vitro by 85% compared with the control, and Escherichia coli by 45%. There is the least amount of epiphytic microorganisms on the leaves of Q. robur L. compared with some tree species [1]. In addition, VM of Q. robur L. have direct milieu (hypotensive) effects on the organism under its canopy, lowering blood pressure by 20-25 mm Hg [2]. A.P. Kazankin (1993) [4] calculated the prehistoric formula of forest species composition of Caucasian Mineral Waters region (Northern Caucasus): 6Qr3Crp1Fr which was based on the theory of calcium-magnesium absorption complex. According to the theory, underground mineral water, soil, forest litter and the leaves of ground vegetation of the area have the same ratio of the cations Ca and Mg - calcium-magnesium index [3]. Hence oldgrowth in the region consisted of oak (Qr) by 60%, hornbeam (Carpinus-Crp) by 30% and ash (Fraxinus-Fr) only by 10%. Currently, the formula of the forests of the region has been changed by man: 5Fr3Crp2Qr. The proportion of oak forests has decreased to 20%, the proportion of ash has increased by 50%, but the proportion of hornbeam hasn't changed. So it is relevant to restore oak forests of the region in the former ratio to other forest-forming species - ash and hornbeam. Taking into consideration the change of economic formation of society in Russia, it is extremely important to restore natural seed oak forests. Therein the luminance of surface areal is a limiting factor. We have calculated that the natural recovery of oak forests is possible providing observation of optimal moisture standards and soil fertility in combination with solar light within 10-24% from the light of open space. Measures for promotion of oak natural regeneration in mountain resorts of the Northern Caucasus can be found in elaborate recommendations [5].

Necessity of electromagnetic emission network arrangement in Georgia

NASA Astrophysics Data System (ADS)

Turazashvili, Ioseb; Kachakhidze, Nino; Machavariani, Kakhaber; Kachakhidze, Manana; Gogoberidze, Vitali; Khazaradze, Giorgi

2015-04-01

The field of the tectonic stress has the hierarchical structure. The most characteristic features connected with the regional tectonic elements are determined by the geologic - tectonic data. It is established that in the young folded areas like the Caucasus the field of tectonic stress is characterized by the sharp anisotropy with the predominance of the compression perpendicular to the trend of folding. Spatial location of the main positive and negative geotectonic morphostructures of the Caucasus shows the existence of the wavy tectonic movements in the region. They are caused by the horizontal compression, provoked evidently by advancement of the Arabian lithosphere plate to the North and its re-approach with the Euro-Asian plate. All these cause considerable deformation of the lithosphere of the Caucasian region and its breaking up in separate blocks. This, in its turn, causes the concentration of stress along the boundaries of the blocks and rising of earthquakes focuses there. According to the instrumental data starting from 1899 at about 40 large earthquakes were fixed in the Caucasus. The rate of risks associated with these hazards increases every year in Georgia due to the appearance of new complicated technological construction: oil and gas pipelines large dams and hydropower plants and others. Modern ground-based and satellite methods of viewing enables to reveal those multiple anomalous geophysical phenomena which become evident in the period preceding earthquake and are directly connected with the process of its preparation. Lately special attention is attributed to the electromagnetic emission fixed during large earthquake and has already been successfully detected in Japan, America and Europe. Unfortunately there is no electromagnetic emission detection network in Georgia yet. The presented abstract concerns arrange of EM emission net and begin implementation of this vital task by arrangement of the one relevant station on the fault near Tbilisi. The work is carried out in the frame of grant (DI/21/9-140/13 "Pilot project of before earthquake detected Very Low Frequency/Low Frequency electromagnetic emission network installation in Georgia") by financial support of Shota Rustaveli National Science Foundation.

The problem of the age and structural position of the Blyb metamorphic complex (Fore Range zone, Great Caucasus) granitoids.

NASA Astrophysics Data System (ADS)

Kamzolkin, Vladimir; Latyshev, Anton; Ivanov, Stanislav

2016-04-01

The Blyb metamorphic complex (BMC) of the Fore Range zone is one of the most high-grade metamorphosed element of the Great Caucasus fold belt. Determination of the timing and the mechanism of formation of the Fore Range fold-thrust structures are not possible without investigation of the BMC located at the basement of its section. At the same time, the conceptions about its structure and age are outdated and need revision. Somin (2011) determined the age of the protolith and metamorphism of the Blyb complex as the Late Devonian - Early Carboniferous. We have recently shown that the BMC has not the dome, as previously thought, but nappe structure (Vidjapin, Kamzolkin, 2015), and is metamorphically coherent with the peak metamorphism pressures up to 22 kbar (Kamzolkin et al., 2015; Konilov et al., 2013). Considering the age and structure of the Blyb complex it is necessary to revise the age of granitoid intrusions and their relations with gneisses and schists, which constitute the main part of the section of the complex. Most authors (Gamkrelidze, Shengelia, 2007; Lavrischev, 2002; Baranov, 1967) adheres to Early Paleozoic age of intrusives, which is doubtful, considering the younger age of metamorphic rocks. We suppose, that the intrusive bodies broke through a BMC nappe structure during the exhumation of the complex (Perchuk, 1991) at the Devonian - Carboniferous boundary. Seemingly, the massive monzodiorites body (Lavrischev, 2002), intruding garnet-muscovite schists and amphibolite gneisses of the Blyb complex and cut by the Main Caucasian fault (MCF), are younger. Given the timing of termination of the MCF movement activity as the Middle Jurassic (Greater Caucasus..., 2005), their age should be in the Early Carboniferous - Middle Jurassic interval. At the same time, on the modern geological map (Lavrischev, 2002) monzodiorites body is assigned to the Middle Paleozoic. The study of the BMC granitoids and monzodiorites will help in determining of the mechanism and age of exhumation of the Blyb metamorphic complex high-pressure rocks. The reported study was partially supported by RFBR, research projects No. 16-35-00571mol_a; 16-05-01012a

Diverse continental subduction scenarios along the Arabia-Eurasia collision zone

NASA Astrophysics Data System (ADS)

Kaban, M. K.; Petrunin, A.; El Khrepy, S.; Al-Arifi, N. S.

2017-12-01

The Arabia-Eurasia continental collision zone is one of the largest and most active on the Earth. It has been discussed already long ago that the convergence of these plates implies subduction of the lithosphere. However, scenarios of this process are still debatable. Even direction of the present-day continental subduction is not clear. Previously, principal conclusions about structure of the upper mantle in this region were chiefly based on seismic tomography results. However, seismic velocities not always provide a complete image of the deep interiors since they are chiefly affected by temperature variations and less - by composition. Here we construct a 3D model of the mantle down to 700 km, which is based on a joint inversion of seismic tomography, residual (crust free) gravity field and residual topography (Kaban et al., 2016). Several cross-sections across the collision zone demonstrate principal variations of the continental subduction scenarios from northwest to southeast. In the southeastern part we observe subduction of the Eurasian plate under the West Great Caucasus, Pontic mountains and further under the northwestern part of the Arabian plate. However, the situation is changed when we move to the East Great Caucasus and Zagros, where clear double-sided subduction is observed. The Arabian plate is subducting under the Zagros, while the Eurasian plate - under the Caucasus merging in the transition zone. This situation persists further to the southeast, where we observe the subduction of the South Caspian block under Alborz accompanied by the counteracting penetration of the Arabian plate from the south. More to the southeast, the subduction of the Arabian plate is stagnated, while the subduction of the Eurasian plate can be traced down to the bottom of the transition zone under the northeastern flank of the Arabian plate. In the southern rim of the collision zone under Makran, we don't find any evidence for the present day subduction; remnants of the formerly subducted slabs are located below 200 km. Kaban, M. K., S. El Khrepy, N. Al-Arifi, M. Tesauro, and W. Stolk (2016), Three dimensional density model of the upper mantle in the Middle East: Interaction of diverse tectonic processes, J. Geophys. Res. Solid Earth, 121.

Glaciers change over the last century, Caucasus Mountains, Georgia, observed by the old topographical maps, Landsat and ASTER satellite imagery

NASA Astrophysics Data System (ADS)

Tielidze, L. G.

2015-07-01

The study of glaciers in the Caucasus began in the first quarter of the 18th century. The first data on glaciers can be found in the works of great Georgian scientist Vakhushti Bagrationi. After almost hundred years the foreign scientists began to describe the glaciers of Georgia. Information about the glaciers of Georgia can be found in the works of W. Abich (1865), D. Freshfield (1869), G. Radde (1873), N. Dinik (1884), I. Rashevskiy (1904), A. Reinhardt (1916, 1917) etc. The first statistical information about the glaciers of Georgia are found in the catalog of the Caucasus glaciers compiled by K. Podozerskiy in 1911 (Podozerkiy, 1911). Then, in 1960s the large-scale (1:25 000, 1:50 000) topographic maps were published, which were compiled in 1955-1960 on the basis of the space images. On the basis of the mentioned maps R. Gobejishvili gave quite detailed statistical information about the glaciers of Georgia (Gobejishvili, 1989). Then in 1975 the glaciological catalog of the former USSR was published (The Catalog of Glaciers of the USSR, Vol. 8-9, 1975), where the statistical information about the glaciers of Georgia was obtained on the basis of the space images of 1970-1975. Thus, complete statistical information on the glaciers of Georgia has not been published for about last 40 years. Data obtained by us by processing of the space images of Landsat and ASTER is the latest material, which is the best tool for identification of the change in the number and area of the glaciers of Georgia during the last one century. The article presents the percentage and quantitative changes in the number and area of the glaciers of Georgia in the years of 1911-1960-1975-2014, according to the individual river basins. The air temperature course of the Georgia's high mountain weather stations has been studied. The river basins have been revealed, where there are the highest indices of the reduction in area and number of the glaciers and the reasons have been explained.

Molecular Dynamics Study of Crystalline Swelling of Montmorillonite as Affected by Interlayer Cation Hydration

NASA Astrophysics Data System (ADS)

Li, Hongliang; Song, Shaoxian; Dong, Xianshu; Min, Fanfei; Zhao, Yunliang; Peng, Chenliang; Nahmad, Yuri

2018-04-01

Swelling of montmorillonite (Mt) is an important factor for many industrial applications. In this study, crystalline swelling of alkali-metal- and alkaline-earth-metal-Mt has been studied through energy optimization and molecular dynamics simulations using the clay force field by Materials Studio 8.0. The delamination and exfoliation of Mt are primarily realized by crystalline swelling caused by the enhanced interlayer cation hydration. The initial position of the interlayer cations and water molecules is the dominated factor for the accuracy of the Mt simulations. Crystalline swelling can be carried out in alkali-metal-Mt and Mg-Mt but with difficulty in Ca-Mt, Sr-Mt and Ba-Mt. The crystalline swelling capacity values are in the order Na-Mt > K-Mt > Cs-Mt > Mg-Mt. This order of crystalline swelling of Mt in the same group can be attributed to the differences between the interlayer cation hydration strengths. In addition, the differences in the crystalline swelling between the alkali-metal-Mt and alkaline-earth-metal-Mt can be primarily attributed to the valence of the interlayer cations.

Medical Entomology Studies - X. A Revision of the Subgenus Pseudoficalbia of the Genus Uranotaenia in Southeast Asia (Diptera: Culicidae) (Contributions of the American Entomological Institute. Volume 14, Number 3)

DTIC Science & Technology

1977-01-01

rindo, Mt. Goza, Shirahama, Sonai , Yashigawa, Uehara. Ishigaki Island: Arakawa, Kabira, Mt. Banna, Mt. Maeshi, Yarabu, Yoshiwara. Bohart (1959...Mt. Goza, Shirahama, Sonai , Uehara. Ishiga ki Island: Arakawa, Mt. Banna, Mt. Kawara, Mt. Maeshi, Mt. Omoto, Yarabu Peninsula, Yoshiwara. Bohart

Turkey and the North Caucasus: An Analysis of Internal and Domestic Relations

DTIC Science & Technology

2013-12-01

FUNDING NUMBERS 6. AUTHOR( S ) AHMET ILGENER 7. PERFORMING ORGANIZATION NAME( S ) AND ADDRESS(ES) Naval Postgraduate School Monterey, CA 93943–5000...8. PERFORMING ORGANIZATION REPORT NUMBER 9. SPONSORING /MONITORING AGENCY NAME( S ) AND ADDRESS(ES) N/A 10. SPONSORING/MONITORING AGENCY...the Circassian language. Adyge and Circassian( s ) will be used interchangeably in this thesis (Adyge refers to the self- designation of the people and

Central Asia: Regional Developments and Implications for U.S. Interests

DTIC Science & Technology

2012-01-03

Central Asia, Assessing Energy and Security Issues in Central Asia, Testimony of Steven Mann, Principal Deputy Assistant Secretary for South and...Akiner, Violence in Andijon, 13 May 2005: An Independent Assessment , Central Asia-Caucasus Institute, July 2005; AbduMannob Polat, Reassessing Andijan...dramatically in the region, others discount the risk that the existing secular governments soon will be overthrown by Islamic extremists.57 In the case

War in the Caucasus is Inevitable

DTIC Science & Technology

2011-06-16

develop a Pan-Turkish state and eliminate internal threats. The Young Turks considered Armenians as a threat to their regime. In 1914, at the...the cars, the music , the storms, the flooding, head wounds, respiratory problems, hospital runs, bicycles, finances, making friends and country... music awards are all what have made Norfolk an unforgettable experience for all of us. KT, ZD and MQ, I couldn’t have done this without you

[Results of Monitoring of the Plan of Measures Directed to Reduction of Ischemic Heart Disease in North Caucasus Republics. Analysis of Dynamics of Cardio-Vascular Mortality].

PubMed

Mamedov, M N

2016-05-01

Comparative analysis of dynamics of cardiovascular mortality in Russia and foreign countries as well as main directions of development of cardiological service in Russia are presented in this review article. Plan of measures for reduction of mortality from ischemic heart disease (IHD) was created in 2015. This plan comprises 4 blocks of assessment of the following measures: directed at improvement of primary IHD prevention (1), directed at secondary prevention of complications of IHD (2); directed at improvement of efficacy of medical care of patients with IHD (3), and directed at monitoring of some demographic parameters (4). The article also contains results of monitoring of realization of the plan of IHD reduction in republics of North Caucasus. Realization of the program on healthy life style (HLS) lacks coordination between ministries. Mass information media are not sufficiently involved in propaganda of HLS. Mean achievement of target levels of main risk factors does not exceed 30-35%. First stage of prophylactic medical examination (dispanserization) has been fulfilled in 65%. High technology care is available both in federal and regional centers. Organization of effective urgent medical service, drug supply, and rehabilitation of patients with IHD are important aspects of improvement of secondary prevention in the region.

Drastic underestimation of amphipod biodiversity in the endangered Irano-Anatolian and Caucasus biodiversity hotspots.

PubMed

Katouzian, Ahmad-Reza; Sari, Alireza; Macher, Jan N; Weiss, Martina; Saboori, Alireza; Leese, Florian; Weigand, Alexander M

2016-03-01

Biodiversity hotspots are centers of biological diversity and particularly threatened by anthropogenic activities. Their true magnitude of species diversity and endemism, however, is still largely unknown as species diversity is traditionally assessed using morphological descriptions only, thereby ignoring cryptic species. This directly limits evidence-based monitoring and management strategies. Here we used molecular species delimitation methods to quantify cryptic diversity of the montane amphipods in the Irano-Anatolian and Caucasus biodiversity hotspots. Amphipods are ecosystem engineers in rivers and lakes. Species diversity was assessed by analysing two genetic markers (mitochondrial COI and nuclear 28S rDNA), compared with morphological assignments. Our results unambiguously demonstrate that species diversity and endemism is dramatically underestimated, with 42 genetically identified freshwater species in only five reported morphospecies. Over 90% of the newly recovered species cluster inside Gammarus komareki and G. lacustris; 69% of the recovered species comprise narrow range endemics. Amphipod biodiversity is drastically underestimated for the studied regions. Thus, the risk of biodiversity loss is significantly greater than currently inferred as most endangered species remain unrecognized and/or are only found locally. Integrative application of genetic assessments in monitoring programs will help to understand the true magnitude of biodiversity and accurately evaluate its threat status.

Impact of GRM: New evidence from the Soviet Union

NASA Technical Reports Server (NTRS)

Mcnutt, M.

1985-01-01

Gravity information released by the Soviet Union allows the quantitative assessment of how the geopotential research mission (GRM) mission might effect the ability to use global gravity data for continental tectonic interpretation. The information is of an isostatic response spectra for eight individual tectonic units in the USSR. The regions examined include the Caroathians, Caucasus, Urals, Pamirs, Tien-Shan, Altal, Chersky Ridge, and East Siberian Platform. The 1 deg x 1 deg gravity data are used to calculate the admittances are used in two different sorts of tectonic studies of mountain belts in the USSR: (1) interpretation of isostatic responses in terms of plate models of compensation for mountainous terrain. Using geologic information concerning time of the orogeny, lithospheric plates involved, and polarity of subduction in collision zones, they convert the best-fitting flexural rigidity to an elastic plate thickness for the lithospheric plate inferred to underlie the mountains; the isostatic admittance functions is an attempt to directly model gravity and topography data for a few select regions in the Soviet Union. By knowing the value of the expected correlation between topography and gravity from the admittances, the Artemjev's map in mountainous areas can be calibrated, and the maps are converted back to Bouguer gravity. This procedure is applied to the Caucasus and southern Urals.

Extensive genome-wide autozygosity in the population isolates of Daghestan.

PubMed

Karafet, Tatiana M; Bulayeva, Kazima B; Bulayev, Oleg A; Gurgenova, Farida; Omarova, Jamilia; Yepiskoposyan, Levon; Savina, Olga V; Veeramah, Krishna R; Hammer, Michael F

2015-10-01

Isolated populations are valuable resources for mapping disease genes, as inbreeding increases genome-wide homozygosity and enhances the ability to map disease alleles on a genetically uniform background within a relatively homogenous environment. The populations of Daghestan are thought to have resided in the Caucasus Mountains for hundreds of generations and are characterized by a high prevalence of certain complex diseases. To explore the extent to which their unique population history led to increased levels of inbreeding, we genotyped >550 000 autosomal single-nucleotide polymorphisms (SNPs) in a set of 14 population isolates speaking Nakh-Daghestanian (ND) languages. The ND-speaking populations showed greatly elevated coefficients of inbreeding, very high numbers and long lengths of Runs of Homozygosity, and elevated linkage disequilibrium compared with surrounding groups from the Caucasus, the Near East, Europe, Central and South Asia. These results are consistent with the hypothesis that most ND-speaking groups descend from a common ancestral population that fragmented into a series of genetic isolates in the Daghestanian highlands. They have subsequently maintained a long-term small effective population size as a result of constant inbreeding and very low levels of gene flow. Given these findings, Daghestanian population isolates are likely to be useful for mapping genes associated with complex diseases.

Interpretation of fault-controlled ramp structures in sedimentary basins - example from Caspian Sea using Landsat TM data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Iranpanah, A.

1989-03-01

Lineaments on a series of edge-enhanced images (TM data) from a region around the Caspian Sea form a geomorphically significant linear trend along the major Caucasus-Kopeh Dagh fault line. This fault represents the line of collision between the Cimmerian continents and the Turan plate on the south and north, respectively. The lineament zone manifests a ramp structure that forms a relatively narrow topographic high in the Caspian Sea. Paleogeographic studies of the Caspian Sea suggest that the basin is part of the eastern Paratethys, which began to develop in the early Paleogene during the Alpine-Himalayan uplift. On the basis ofmore » the lineaments and associated geomorphic features, the Caspian Sea can be divided into southern, central, and the northern Caspian subbasins. The Caucasus-Kopeh Dagh fault line trends N80/degrees/W and separates the southern Caspian from the central subbasin, approximately along 40/degrees/N latitude. The boundary between the central and the northern subbasins is also a linear topographic high which trends N70/degrees/E and lies approximately at 44/degrees/N latitude. The southern and central subbasins have subequal areal extension covering 35.64% and the 36.63% of the whole sea, whereas the northern subbasin occupies only 27.73% of the basin.« less

Drastic underestimation of amphipod biodiversity in the endangered Irano-Anatolian and Caucasus biodiversity hotspots

PubMed Central

Katouzian, Ahmad-Reza; Sari, Alireza; Macher, Jan N.; Weiss, Martina; Saboori, Alireza; Leese, Florian; Weigand, Alexander M.

2016-01-01

Biodiversity hotspots are centers of biological diversity and particularly threatened by anthropogenic activities. Their true magnitude of species diversity and endemism, however, is still largely unknown as species diversity is traditionally assessed using morphological descriptions only, thereby ignoring cryptic species. This directly limits evidence-based monitoring and management strategies. Here we used molecular species delimitation methods to quantify cryptic diversity of the montane amphipods in the Irano-Anatolian and Caucasus biodiversity hotspots. Amphipods are ecosystem engineers in rivers and lakes. Species diversity was assessed by analysing two genetic markers (mitochondrial COI and nuclear 28S rDNA), compared with morphological assignments. Our results unambiguously demonstrate that species diversity and endemism is dramatically underestimated, with 42 genetically identified freshwater species in only five reported morphospecies. Over 90% of the newly recovered species cluster inside Gammarus komareki and G. lacustris; 69% of the recovered species comprise narrow range endemics. Amphipod biodiversity is drastically underestimated for the studied regions. Thus, the risk of biodiversity loss is significantly greater than currently inferred as most endangered species remain unrecognized and/or are only found locally. Integrative application of genetic assessments in monitoring programs will help to understand the true magnitude of biodiversity and accurately evaluate its threat status. PMID:26928527

Different waves and directions of Neolithic migrations in the Armenian Highland.

PubMed

Hovhannisyan, Anahit; Khachatryan, Zaruhi; Haber, Marc; Hrechdakian, Peter; Karafet, Tatiana; Zalloua, Pierre; Yepiskoposyan, Levon

2014-01-01

The peopling of Europe and the nature of the Neolithic agricultural migration as a primary issue in the modern human colonization of the globe is still widely debated. At present, much uncertainty is associated with the reconstruction of the routes of migration for the first farmers from the Near East. In this context, hospitable climatic conditions and the key geographic position of the Armenian Highland suggest that it may have served as a conduit for several waves of expansion of the first agriculturalists from the Near East to Europe and the North Caucasus. Here, we assess Y-chromosomal distribution in six geographically distinct populations of Armenians that roughly represent the extent of historical Armenia. Using the general haplogroup structure and the specific lineages representing putative genetic markers of the Neolithic Revolution, haplogroups R1b1a2, J2, and G, we identify distinct patterns of genetic affinity between the populations of the Armenian Highland and the neighboring ones north and west from this area. Based on the results obtained, we suggest a new insight on the different routes and waves of Neolithic expansion of the first farmers through the Armenian Highland. We detected at least two principle migratory directions: (1) westward alongside the coastline of the Mediterranean Sea and (2) northward to the North Caucasus.

Ground Motion Modeling in the Eastern Caucasus

DOE PAGES

Pitarka, Arben; Gok, Rengin; Yetirmishli, Gurban; ...

2016-05-13

In this paper, we analyzed the performance of a preliminary three-dimensional (3D) velocity model of the Eastern Caucasus covering most of the Azerbaijan. The model was developed in support to long-period ground motion simulations and seismic hazard assessment from regional earthquakes in Azerbaijan. The model’s performance was investigated by simulating ground motion from the damaging Mw 5.9, 2012 Zaqatala earthquake, which was well recorded throughout the region by broadband seismic instruments. In our simulations, we use a parallelized finite-difference method of fourth-order accuracy. The comparison between the simulated and recorded ground motion velocity in the modeled period range of 3–20more » s shows that in general, the 3D velocity model performs well. Areas in which the model needs improvements are located mainly in the central part of the Kura basin and in the Caspian Sea coastal areas. Comparisons of simulated ground motion using our 3D velocity model and corresponding 1D regional velocity model were used to locate areas with strong 3D wave propagation effects. In areas with complex underground structure, the 1D model fails to produce the observed ground motion amplitude and duration, and spatial extend of ground motion amplification caused by wave propagation effects.« less

2. BUILDING MT76A AND MT76B FROM STREET, BUILDING MT76A IN ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

2. BUILDING MT-76-A AND MT-76-B FROM STREET, BUILDING MT-76-A IN FOREGROUND - Fort Keogh, Livestock & Range Research Station, 3 miles west of Miles City on U.S. Highway 10, Miles City, Custer County, MT

Arsenic trioxide (ATO) influences the gene expression of metallothioneins in human glioblastoma cells.

PubMed

Falnoga, Ingrid; Zelenik Pevec, Andreja; Šlejkovec, Zdenka; Žnidarič, Magda Tušek; Zajc, Irena; Mlakar, Simona Jurković; Marc, Janja

2012-12-01

Arsenic trioxide (As(2)O(3); ATO, TRISENOX®) is used to treat patients with refractory or relapsed acute promyelocytic leukaemia while its application for treatment of solid cancers like glioblastoma is still under evaluation. In the present study, we investigated the interaction of arsenic trioxide with metallothionein (MT) isoforms as a possible (protective response) resistance of glioblastoma cells to arsenic-induced cytotoxicity. Special attention was focused on MT3, the isoform expressed mainly in the brain. MT3 has low metal inducibility, fast metal binding/releasing properties and outstanding neuronal inhibitory activity. The human astrocytoma (glioblastoma) cell line U87 MG was treated with 0.6, 2 and 6-7 μM arsenic (equivalent to 0.3, 1 and 3-3.5 μM As(2)O(3)) for 12, 24 or 48 h and gene expression for different MT isoforms, namely MT2A, MT1A, MT1F, MT1X, MT1E and MT3, was measured by real time qPCR using SYBR Green I and Taqman® gene expression assays. TfR, 18S rRNA, GAPDH and AB were tested as reference genes, and the last two evaluated to be appropriate in conditions of low (GAPDH) and high (AB) arsenic exposure. The gene expression of MT3 gene was additionally tested and confirmed by restriction enzyme analysis with PvuII. In the given conditions the mRNAs of six MT isoforms were identified in human glioblastoma cell line U87 MG. Depending on arsenic exposure conditions, an increase or decrease of MT gene expression was observed for each isoform, with the highest increase for isoforms MT1X, MT1F and MT2A mRNA (up to 13-fold) and more persistent decreases for MT1A, MT1E and MT3 mRNA. Despite the common assumption of the noninducibility of MT3, the evident MT3 mRNA increase was observed during high As exposure (up to 4-fold). In conclusion, our results clearly demonstrate the influence of As on MT isoform gene expression. The MT1X, MT1F and MT2A increase could represent brain tumour acquired resistance to As cytotoxicity while the MT3 increase is more enigmatic, with its possible involvement in arsenic-related induction of type II cell death.

Contrasting expression of membrane metalloproteinases, MT1-MMP and MT3-MMP, suggests distinct functions in skeletal development.

PubMed

Yang, Maozhou; Zhang, Bingbing; Zhang, Liang; Gibson, Gary

2008-07-01

Membrane-type 1 matrix metalloproteinase (MT1-MMP) is the most ubiquitous and widely studied of the membrane-type metalloproteinases (MT-MMPs). It was thus surprising to find no published data on chicken MT1-MMP. We report here the characterization of the chicken gene. Its low sequence identity with the MT1-MMP genes of other species, high GC content, and divergent catalytic domain explains the absence of data and our difficulties in characterizing the gene. The absence of structural features in the chicken gene that have been suggested to be critical for the activation of MMP-2 by MT1-MMP; for the effect of MT1-MMP on cell migration and for the recycling of MT1-MMP suggest these features are either not essential or that MT1-MMP does not perform these functions in chickens. Comparison of the expression of chicken MT1-MMP with MT3-MMP and with MMP-2 and MMP-13 has confirmed the previously recognized co-expression of MT1-MMP with MMP-2 and MMP-13 in fibrous and vascular tissues, particularly those surrounding the developing long bones in other species. By contrast, MT3-MMP expression differs markedly from that of MT1-MMP and of both MMP-2 and MMP-13. MT3-MMP is expressed by chondrocytes of the developing articular surface. Similar expression patterns of this group of MT-MMPs and MMPs have been observed in mouse embryos and suggest distinct and specific functions for MT1-MMP and MT3-MMP in skeletal development.

Cytoplasmic transfer of heritable elements other than mtDNA from SAMP1 mice into mouse tumor cells suppresses their ability to form tumors in C57BL6 mice.

PubMed

Shimizu, Akinori; Tani, Haruna; Takibuchi, Gaku; Ishikawa, Kaori; Sakurazawa, Ryota; Inoue, Takafumi; Hashimoto, Tetsuo; Nakada, Kazuto; Takenaga, Keizo; Hayashi, Jun-Ichi

2017-11-04

In a previous study, we generated transmitochondrial P29mtSAMP1 cybrids, which had nuclear DNA from the C57BL6 (referred to as B6) mouse strain-derived P29 tumor cells and mitochondrial DNA (mtDNA) exogenously-transferred from the allogeneic strain SAMP1. Because P29mtSAMP1 cybrids did not form tumors in syngeneic B6 mice, we proposed that allogeneic SAMP1 mtDNA suppressed tumor formation of P29mtSAMP1 cybrids. To test this hypothesis, current study generated P29mt(sp)B6 cybrids carrying all genomes (nuclear DNA and mtDNA) from syngeneic B6 mice by eliminating SAMP1 mtDNA from P29mtSAMP1 cybrids and reintroducing B6 mtDNA. However, the P29mt(sp)B6 cybrids did not form tumors in B6 mice, even though they had no SAMP1 mtDNA, suggesting that SAMP1 mtDNA is not involved in tumor suppression. Then, we examined another possibility of whether SAMP1 mtDNA fragments potentially integrated into the nuclear DNA of P29mtSAMP1 cybrids are responsible for tumor suppression. We generated P29 H (sp)B6 cybrids by eliminating nuclear DNA from P29mt(sp)B6 cybrids and reintroducing nuclear DNA with no integrated SAMP1 mtDNA fragment from mtDNA-less P29 cells resistant to hygromycin in selection medium containing hygromycin. However, the P29 H (sp)B6 cybrids did not form tumors in B6 mice, even though they carried neither SAMP1 mtDNA nor nuclear DNA with integrated SAMP1 mtDNA fragments. Moreover, overproduction of reactive oxygen species (ROS) and bacterial infection were not involved in tumor suppression. These observations suggest that tumor suppression was caused not by mtDNA with polymorphic mutations or infection of cytozoic bacteria but by hypothetical heritable cytoplasmic elements other than mtDNA from SAMP1 mice. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

Examining the specific contributions of individual Arabidopsis metallothioneins to copper distribution and metal tolerance.

PubMed

Guo, Woei-Jiun; Meetam, Metha; Goldsbrough, Peter B

2008-04-01

Metallothioneins (MTs) are small cysteine-rich proteins found in various eukaryotes. Plant MTs are classified into four types based on the arrangement of cysteine residues. To determine whether all four types of plant MTs function as metal chelators, six Arabidopsis (Arabidopsis thaliana) MTs (MT1a, MT2a, MT2b, MT3, MT4a, and MT4b) were expressed in the copper (Cu)- and zinc (Zn)-sensitive yeast mutants, Deltacup1 and Deltazrc1 Deltacot1, respectively. All four types of Arabidopsis MTs provided similar levels of Cu tolerance and accumulation to the Deltacup1 mutant. The type-4 MTs (MT4a and MT4b) conferred greater Zn tolerance and higher accumulation of Zn than other MTs to the Deltazrc1 Deltacot1 mutant. To examine the functions of MTs in plants, we studied Arabidopsis plants that lack MT1a and MT2b, two MTs that are expressed in phloem. The lack of MT1a, but not MT2b, led to a 30% decrease in Cu accumulation in roots of plants exposed to 30 mum CuSO(4). Ectopic expression of MT1a RNA in the mt1a-2 mt2b-1 mutant restored Cu accumulation in roots. The mt1a-2 mt2b-1 mutant had normal metal tolerance. However, when MT deficiency was combined with phytochelatin deficiency, growth of the mt1a-2 mt2b-1 cad1-3 triple mutant was more sensitive to Cu and cadmium compared to the cad1-3 mutant. Together these results provide direct evidence for functional contributions of MTs to plant metal homeostasis. MT1a, in particular, plays a role in Cu homeostasis in the roots under elevated Cu. Moreover, MTs and phytochelatins function cooperatively to protect plants from Cu and cadmium toxicity.

Dedicated Pediatricians in Emergency Department: Shorter Waiting Times and Lower Costs

PubMed Central

Melo, Manuel Rocha; Ferreira-Magalhães, Manuel; Flor-Lima, Filipa; Rodrigues, Mariana; Severo, Milton; Almeida-Santos, Luis; Caldas-Afonso, Alberto; Barros, Pedro Pita; Ferreira, António

2016-01-01

Background Dedicated pediatricians in emergency departments (EDs) may be beneficial, though no previous studies have assessed the related costs and benefits/harms. We aimed to evaluate the net benefits and costs of dedicated emergency pediatricians in a pediatric ED. Methods Cost-consequences analysis of visits to a pediatric ED of a tertiary hospital. Two pediatric ED Medical Teams (MT) were compared: MT-A (May–September 2012), with general pediatrics physicians only; and MT-B (May–September 2013), with emergency dedicated pediatricians. The main outcomes analyzed were relevant clinical outcomes, patient throughput time and costs. Results We included 8,694 children in MT-A and 9,417 in MT-B. Medication use in the ED increased from 42.3% of the children in MT-A to 49.6% in MT-B; diagnostic tests decreased from 24.2% in MT-A to 14.3% in MT-B. Hospitalization increased from 1.3% in MT-A to 3.0% in MT-B; however, there was no significant difference in diagnosis-related group relative weight of hospitalized children in MT-A and MT-B (MT-A, 0.979; MT-B, 1.075). No differences were observed in ED readmissions or in patients leaving without being seen by a physician. The patient throughput time was significantly shorter in MT-B, with faster times to first medical observation. Within the cost domains analyzed, the total expenditures per children observed in the ED were 16% lower in MT-B: 37.87 euros in MT-A; 31.97 euros in MT-B. Conclusion The presence of dedicated emergency pediatricians in a pediatric ED was associated with significantly lower waiting times in the ED, reduced costs, and similar clinical outcomes. PMID:27564093

Seismotectonic zoning of Azerbaijan territory

NASA Astrophysics Data System (ADS)

Kangarli, Talat; Aliyev, Ali; Aliyev, Fuad; Rahimov, Fuad

2017-04-01

Studying of the space-time correlation and consequences effect between tectonic events and other geological processes that have created modern earth structure still remains as one of the most important problems in geology. This problem is especially important for the East Caucasus-South Caspian geodynamic zone. Being situated at the eastern part of the Caucasian strait, this zone refers to a center of Alpine-Himalayan active folded belt, and is known as a complex tectonic unit with jointing heterogeneous structural-substantial complexes arising from different branches of the belt (Doburja-Caucasus-Kopetdag from the north and Pyrenean-Alborz from the south with Kura and South Caspian zone). According to GPS and precise leveling data, activity of regional geodynamic processes shows intensive horizontal and vertical movements of the Earth's crust as conditioned by collision of the Arabian and Eurasian continental plates continuing since the end of Miocene. So far studies related to the regional of geology-geophysical data, periodically used for the geological and tectonic modeling of the environment mainly based on the fixing ideology. There still remains a number of uncertainties in solution of issues related to regional geology, tectonics and magmatism, structure and interrelation of different structural zones, space-time interrelations between onshore and offshore complexes, etc. At the same time large dataset produced by surface geological surveys, deep geological mapping of on- and offshore areas with the use of seismic and electrical reconnaissance and geophysical field zoning methods, deep well drilling and remote sensing activities. Conducted new studies produced results including differentiation of formerly unknown nappe complexes of the different ages and scales within the structure of mountain-fold zones, identification of new zones containing ophiolites in their section, outlining of currently active faulting areas, geophysical interpretation of the deep structure of Greater and Lesser Caucasus, detailed description of the deep structure of Caspian zone, Kur and Caspian megadepressions, identification of nappe-folded structure of the Absheron Peninsula and the Absheron threshold at the border of Middle and South Caspian, justification of the possible hydrocarbon concentration at the tectonically stratified substantial complexes of mountain and foothill areas, etc. Based on the outcomes of implemented researches, some general conclusions and schemes were drawn for some parts of the project region within the plate tectonics conceptual frameworks, to include the territories of Lesser Caucasus and South Caspian. Analysis and comparison of these data with macroseismic and instrumental data allowed us to conduct seismotectonic studies in a region and develop a new scheme of seismotectonic map with outlined recent and forecasted seismic activity. There also correlated foci zones of earthquakes with subhorizontal and subvertical borders in earth crust, which shows their structure-dynamic relationship. In the one hand, the earthquake foci zones belong to the faults of the basement which extend to sedimentary cover and their intersection knots. On the other hand, there appearing inner-block seismogenic levels, namely, in seismic generation acts all the earth crust: tectonic stress results on movements along fault zones, as well as lateral displacements along non-stable contacts of the structure-substance complexes of different competency.

Crustal underthrusting in the Crimea - Northern Black Sea area

NASA Astrophysics Data System (ADS)

Yegorova, Tamara; Gobarenko, Valentina; Murovskaya, Anna; Sheremet, Yevgeniya

2016-04-01

The southern Crimean Mountains and the Greater Caucasus form a fold and thrust belt located on the northern margin of the Black Sea, south of Precambrian East European Craton. It is limited to the south by the Main Caucasus Thrust that runs along the whole of the northern margin of the Black Sea and is related to a zone of present day seismicity along the southern Crimea-Caucasus coast of the Sea (Crimean Seismogenic Zone). Strong seismic activity in the region indicates active on-going tectonic processes caused by collision of Eurasian and Arabian plates. In the vicinity of the seismogenic zone there is a transition from thick continental crust on the north to thin suboceanic one on the south in the sea. However, type and structural relations between them are known poorly. To understand better geodynamic processes, there were collected data on the earthquakes that were analyzed together with focal mechanisms of strong earthquakes, new results of geological structural analysis and paleostress reconstructions by kinematic method. These allowed drawing the following conclusions. Seismic activity in the study region, evidenced of active tectonic processes under compression and transpression at the transition from the southern margin of the East European Craton (Scythian Platform) to the Black Sea, is confirmed by predominance of reverse mechanisms among 31 focal mechanisms. In the seismogenic zone, much of which is located along the continental slope, there are three subzones (from east to west): 1) Kerch-Taman one dipping northwards at angle 30 degrees to the depth of 90 km; 2) South-Coast subzone gently dipping to the southeast at angle of 18 degrees with foci depth range 10-45 km, and 3) orthogonal to the latter and confining it from the west the Sevastopol one, characterized by scattered seismicity. The earthquake foci are located in the gradient zone that separates intense Crimea gravity high and positive anomaly of Northern Caucasus from negative gravity field of the Black Sea. The north-south tight band of the South-Coast subzone epicenters relates with highest gravity gradient offshore and is traced northward onshore on transition zone between the Western and Eastern Crimean Mountains. In the eastern part the reverse and strike-slip faulting prevail, while in the western part - the strike-slip and normal faults occur. The Kerch-Taman subzone is characterized by underthrusting the East Black Sea microplate with thin suboceanic (or strongly extended continental) crust below the Scythian Platform with thick continental crust. In the South-Coast subzone this process is complicated by wedging the frontal part of suboceanic crust into the mid-crust of Crimea. Sevastopol branch of the earthquakes is interpreted as zone of strike-slip deformations. The wedging of the East Black Sea microplate into the Scythian Plate crust in Crimea causes intense gravity anomaly of Crimean Mountains and strong present-day uplift of the latter. The analogue of described wedging mechanism seems to be geodynamic processes in the Ivrea area in Western Alps, ccharacterized by similar crust structure and intense gravity anomaly.

75 FR 43556 - TA-W-73,381, MT Rail Link, Inc., Missoula, MT; TA-W-73,381A, Billings, MT; TA-W-73,381B, Laurel...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-07-26

... DEPARTMENT OF LABOR Employment and Training Administration TA-W-73,381, MT Rail Link, Inc., Missoula, MT; TA-W-73,381A, Billings, MT; TA-W-73,381B, Laurel, MT; TA-W-73,381C, Livingston, MT; TA-W-73... Helena, Montana. The amended notice applicable to TA-W-73,381 is hereby issued as follows: All workers of...

Remote Control by Inter-Enzyme Allostery: A Novel Paradigm for Regulation of the Shikimate Pathway.

PubMed

Munack, Steffi; Roderer, Kathrin; Ökvist, Mats; Kamarauskaite, Jurate; Sasso, Severin; van Eerde, André; Kast, Peter; Krengel, Ute

2016-03-27

DAHP synthase and chorismate mutase catalyze key steps in the shikimate biosynthetic pathway en route to aromatic amino acids. In Mycobacterium tuberculosis, chorismate mutase (MtCM; Rv0948c), located at the branch point toward phenylalanine and tyrosine, has poor activity on its own. However, it is efficiently activated by the first enzyme of the pathway, DAHP synthase (MtDS; Rv2178c), through formation of a non-covalent MtCM-MtDS complex. Here, we show how MtDS serves as an allosteric platform for feedback regulation of both enzymes, using X-ray crystallography, small-angle X-ray scattering, size-exclusion chromatography, and multi-angle light scattering. Crystal structures of the fully inhibited MtDS and the allosterically down-regulated MtCM-MtDS complex, solved at 2.8 and 2.7Å, respectively, reveal how effector binding at the internal MtDS subunit interfaces regulates the activity of MtDS and MtCM. While binding of all three metabolic end products to MtDS shuts down the entire pathway, the binding of phenylalanine jointly with tyrosine releases MtCM from the MtCM-MtDS complex, hence suppressing MtCM activation by 'inter-enzyme allostery'. This elegant regulatory principle, invoking a transient allosteric enzyme interaction, seems to be driven by dynamics and is likely a general strategy used by nature. Copyright © 2016 Elsevier Ltd. All rights reserved.

mtDNAmanager: a Web-based tool for the management and quality analysis of mitochondrial DNA control-region sequences

PubMed Central

Lee, Hwan Young; Song, Injee; Ha, Eunho; Cho, Sung-Bae; Yang, Woo Ick; Shin, Kyoung-Jin

2008-01-01

Background For the past few years, scientific controversy has surrounded the large number of errors in forensic and literature mitochondrial DNA (mtDNA) data. However, recent research has shown that using mtDNA phylogeny and referring to known mtDNA haplotypes can be useful for checking the quality of sequence data. Results We developed a Web-based bioinformatics resource "mtDNAmanager" that offers a convenient interface supporting the management and quality analysis of mtDNA sequence data. The mtDNAmanager performs computations on mtDNA control-region sequences to estimate the most-probable mtDNA haplogroups and retrieves similar sequences from a selected database. By the phased designation of the most-probable haplogroups (both expected and estimated haplogroups), mtDNAmanager enables users to systematically detect errors whilst allowing for confirmation of the presence of clear key diagnostic mutations and accompanying mutations. The query tools of mtDNAmanager also facilitate database screening with two options of "match" and "include the queried nucleotide polymorphism". In addition, mtDNAmanager provides Web interfaces for users to manage and analyse their own data in batch mode. Conclusion The mtDNAmanager will provide systematic routines for mtDNA sequence data management and analysis via easily accessible Web interfaces, and thus should be very useful for population, medical and forensic studies that employ mtDNA analysis. mtDNAmanager can be accessed at . PMID:19014619

Molecular, dynamic, and structural origin of inhomogeneous magnetization transfer in lipid membranes.

PubMed

Swanson, Scott D; Malyarenko, Dariya I; Fabiilli, Mario L; Welsh, Robert C; Nielsen, Jon-Fredrik; Srinivasan, Ashok

2017-03-01

To elucidate the dynamic, structural, and molecular properties that create inhomogeneous magnetization transfer (ihMT) contrast. Amphiphilic lipids, lamellar phospholipids with cholesterol, and bovine spinal cord (BSC) specimens were examined along with nonlipid systems. Magnetization transfer (MT), enhanced MT (eMT, obtained with double-sided radiofrequency saturation), ihMT (MT - eMT), and dipolar relaxation, T 1D , were measured at 2.0 and 11.7 T. The amplitude of ihMT ratio (ihMTR) is positively correlated with T 1D values. Both ihMTR and T 1D increase with increasing temperature in BSC white matter and in phospholipids and decrease with temperature in other lipids. Changes in ihMTR with temperature arise primarily from alterations in MT rather than eMT. Spectral width of MT, eMT, and ihMT increases with increasing carbon chain length. Concerted motions of phospholipids in white matter decrease proton spin diffusion leading to increased proton T 1D times and increased ihMT amplitudes, consistent with decoupling of Zeeman and dipolar spin reservoirs. Molecular specificity and dynamic sensitivity of ihMT contrast make it a suitable candidate for probing myelin membrane disorders. Magn Reson Med 77:1318-1328, 2017. © 2016 International Society for Magnetic Resonance in Medicine. © 2016 International Society for Magnetic Resonance in Medicine.

Combining Afferent Stimulation and Mirror Therapy for Improving Muscular, Sensorimotor, and Daily Functions After Chronic Stroke: A Randomized, Placebo-Controlled Study.

PubMed

Lee, Ya-yun; Lin, Keh-chung; Wu, Ching-yi; Liao, Ching-hua; Lin, Jui-chi; Chen, Chia-ling

2015-10-01

Mirror therapy (MT) combined with mesh glove (MG) afferent stimulation (MT + MG) has been suggested as an effective intervention for motor recovery in patients with stroke. This study aimed to further determine the treatment effects of the MT + MG approach on muscular properties, sensorimotor functions, and daily function. This was a single-blind, randomized, placebo-controlled study. Forty-eight participants with chronic stroke were recruited from medical centers and were randomly assigned to the MT, MT + MG, and MT with sham MG stimulation (MT + sham) groups. The intervention consisted of 1.5 hrs/day, 5 days/wk for 4 wks. Primary outcomes were the Fugl-Meyer Assessment and muscular properties (muscle tone and stiffness). Secondary outcomes included measures of sensorimotor and daily functions. Compared with the MT and MT + sham groups, the MT + MG group demonstrated improved muscular properties. The MT + MG and MT + sham groups showed greater improvement in manual dexterity and daily function than the MT group did. No beneficial effects on the Fugl-Meyer Assessment and other sensorimotor outcomes were found for the MT + MG group. Although no significant group differences were found in the Fugl-Meyer Assessment, MT + MG induced distinctive effects on muscular properties, manual dexterity, and daily function.

The efficacy of manual therapy and exercise for treating non-specific neck pain: A systematic review.

PubMed

Hidalgo, Benjamin; Hall, Toby; Bossert, Jean; Dugeny, Axel; Cagnie, Barbara; Pitance, Laurent

2017-11-06

To review and update the evidence for different forms of manual therapy (MT) and exercise for patients with different stages of non-specific neck pain (NP). MEDLINE, Cochrane-Register-of-Controlled-Trials, PEDro, EMBASE. A qualitative systematic review covering a period from January 2000 to December 2015 was conducted according to updated-guidelines. Specific inclusion criteria only on RCTs were used; including differentiation according to stages of NP (acute - subacute [ASNP] or chronic [CNP]), as well as sub-classification based on type of MT interventions: MT1 (HVLA manipulation); MT2 (mobilization and/or soft-tissue-techniques); MT3 (MT1 + MT2); and MT4 (Mobilization-with-Movement). In each sub-category, MT could be combined or not with exercise and/or usual medical care. Initially 121 studies were identified for potential inclusion. Based on qualitative and quantitative evaluation criteria, 23 RCTs were identified for review. Evidence for ASNP: MODERATE-evidence: In favour of (i) MT1 to the cervical spine (Cx) combined with exercises when compared to MT1 to the thoracic spine (Tx) combined with exercises; (ii) MT3 to the Cx and Tx combined with exercise compared to MT2 to the Cx with exercise or compared to usual medical care for pain and satisfaction with care from short to long-term. Evidence for CNP: STRONG-evidence: Of no difference of efficacy between MT2 at the symptomatic Cx level(s) in comparison to MT2 on asymptomatic Cx level(s) for pain and function. MODERATE to STRONG-evidence: In favour of MT1 and MT3 on Cx and Tx with exercise in comparison to exercise or MT alone for pain, function, satisfaction with care and general-health from short to moderate-terms. MODERATE-evidence: In favour (i) of MT1 as compared to MT2 and MT4, all applied to the Cx, for neck mobility, and pain in the very short term; (ii) of MT2 using sof-tissue-techniques to the Cx and Tx or MT3 to the Cx and Tx in comparison to no-treatment in the short-term for pain and disability. This systematic review updates the evidence for MT combined or not with exercise and/or usual medical care for different stages of NP and provides recommendations for future studies. Two majors points could be highlighted, the first one is that combining different forms of MT with exercise is better than MT or exercise alone, and the second one is that mobilization need not be applied at the symptomatic level(s) for improvements of NP patients. These both points may have clinical implications for reducing the risk involved with some MT techniques applied to the cervical spine.

Opposing Control by Transcription Factors MYB61 and MYB3 Increases Freezing Tolerance by Relieving C-Repeat Binding Factor Suppression1[OPEN

PubMed Central

Zhang, Yunqin; Miao, Zhenyan; Xie, Can; Meng, Xiangzhao; Deng, Jie; Mysore, Kirankumar S.; Frugier, Florian; Wang, Tao

2016-01-01

Cold acclimation is an important process by which plants respond to low temperature and enhance their winter hardiness. C-REPEAT BINDING FACTOR1 (CBF1), CBF2, and CBF3 genes were shown previously to participate in cold acclimation in Medicago truncatula. In addition, MtCBF4 is transcriptionally induced by salt, drought, and cold stresses. We show here that MtCBF4, shown previously to enhance drought and salt tolerance, also positively regulates cold acclimation and freezing tolerance. To identify molecular factors acting upstream and downstream of the MtCBF4 transcription factor (TF) in cold responses, we first identified genes that are differentially regulated upon MtCBF4 overexpression using RNAseq Digital Gene Expression Profiling. Among these, we showed that MtCBF4 directly activates the transcription of the COLD ACCLIMATION SPECIFIC15 (MtCAS15) gene. To gain insights into how MtCBF4 is transcriptionally regulated in response to cold, an R2R3-MYB TF, MtMYB3, was identified based on a yeast one-hybrid screen as binding directly to MYB cis-elements in the MtCBF4 promoter, leading to the inhibition of MtCBF4 expression. In addition, another MYB TF, MtMYB61, identified as an interactor of MtMYB3, can relieve the inhibitory effect of MtMYB3 on MtCBF4 transcription. This study, therefore, supports a model describing how MtCBF4 is regulated by antagonistic MtMYB3/MtMYB61 TFs, leading to the up-regulation of downstream targets such as MtCAS15 acting in cold acclimation in M. truncatula. PMID:27578551

Assessment of metallothionein and antibodies to metallothionein in normal and autistic children having exposure to vaccine-derived thimerosal.

PubMed

Singh, Vijendra K; Hanson, Jeff

2006-06-01

Allergic autoimmune reaction after exposure to heavy metals such as mercury may play a causal role in autism, a developmental disorder of the central nervous system. As metallothionein (MT) is the primary metal-detoxifying protein in the body, we conducted a study of the MT protein and antibodies to metallothionein (anti-MT) in normal and autistic children whose exposure to mercury was only from thimerosal-containing vaccines. Laboratory analysis by immunoassays revealed that the serum level of MT did not significantly differ between normal and autistic children. Furthermore, autistic children harboured normal levels of anti-MT, including antibodies to isoform MT-I (anti-MT-I) and MT-II (anti-MT-II), without any significant difference between normal and autistic children. Our findings indicate that because autistic children have a normal profile of MT and anti-MT, the mercury-induced autoimmunity to MT may not be implicated in the pathogenesis of autism.

Stability in Russia’s Chechnya and Other Regions of the North Caucasus: Recent Developments

DTIC Science & Technology

2009-04-03

economic downturn and Russia’s boosted financial commitments to Abkhazia and South Ossetia could result in fewer Russian subsidies to the North...security forces. In late March 2009, Dagestani political analyst Khadzhimurat Kamalov discounted any effect on Dagestan’s security if some or all...suffered greatly during the Chechnya conflict, mainly from the influx of displaced persons which in effect doubled the population during intense

Russian National Security: Perceptions, Policies, and Prospects

DTIC Science & Technology

2001-11-01

relationshipswith theCaucasus andCentralAsia. It examines the failures, costs, and impact of Russian military efforts in Chechnya, noting that the trends... impact of which is exacerbated by a dearth of funding. As a result, the Russian military has been living off of war reserves and stopgap measures...growing economic gap between thosewho could participate in the global economy and those who could not. High levels of unemployment had a minor impact

Unraveling the Georgian Knot: The United States, Russia, and Georgia and the New Great Game in the Caucasus

DTIC Science & Technology

2009-12-01

the degree of MASTER OF SCIENCE IN DEFENSE ANALYSIS From the NAVAL POSTGRADUATE SCHOOL December 2009 Author: C. Tim...rich agricultural production of wines , alcoholic beverages, and citrus fruits combined with its Black Sea coast tourist industry and black market...This U.S. assistance includes Freedom Support Act (FSA) programs, food aid (United States Department of Agriculture (USDA), Peace Corps, and security

The Karabagh Conflict and Its Effects on Turkey’s Role in the Caucasus

DTIC Science & Technology

2001-12-01

controlled opportunities or open up new stakes to collective competition.14 Ethnic “ entrepreneurs ” (who are often professional brokers, such as...also provides crucial tools for political entrepreneurs to achieve a leading political position and legitimacy. All these increase group cohesion and...Policy Interests in the Transcaucasus since 1991,” June 1999, p. 60 240 Melconian, Melcon G. “Caspian Oil and Pipelines: A Millennial Opportunity for

Russia, the United States, and the Caucasus

DTIC Science & Technology

2007-02-01

Jefferson Davis Highway, Suite 1204, Arlington VA 22202-4302. Respondents should be aware that notwithstanding any other provision of law, no person shall...16. SECURITY CLASSIFICATION OF: 17. LIMITATION OF ABSTRACT 18. NUMBER OF PAGES 48 19a. NAME OF RESPONSIBLE PERSON a. REPORT unclassified b...presidency at the end of 1999, has been linked inextricably to his person and legacy ever since. For Putin the statesman, nothing short of victory will do

The Caucasus Emirate: Emerging Force or Jihadist Fantasy?

DTIC Science & Technology

2011-03-22

attracted the attention of the international jihadist movement. Experienced mujahedeen, led by the Saudi Ibn al- Khattab , came to Chechnya to support the...included as objectives for independence and Muslim self-governance. In August 1999, forces led by al- Khattab and Chechen fighter Shamil Basayev invaded...considerably less than during the late 1990s and early 2000s when prominent jihadists such as Ibn al- Khattab were actively participating in operations.26

Armenia, Azerbaijan, and Georgia: Political Developments and Implications for U.S. Interests

DTIC Science & Technology

2012-09-27

over its fate. Close ties with Georgia have evolved from U.S. contacts with its pro -Western leadership. Successive Administrations have supported U.S...ties with Georgia after Eduard Shevardnadze (formerly a pro -Western Soviet foreign minister) assumed power there in early 1992. Faced with calls in...generally viewed Turkey as able to foster pro -Western policies and discourage Iranian interference in the South Caucasus states, even though Turkey favors

mtDNA, Metastasis, and the Mitochondrial Unfolded Protein Response (UPRmt).

PubMed

Kenny, Timothy C; Germain, Doris

2017-01-01

While several studies have confirmed a link between mitochondrial DNA (mtDNA) mutations and cancer cell metastasis, much debate remains regarding the nature of the alternations in mtDNA leading to this effect. Meanwhile, the mitochondrial unfolded protein response (UPR mt ) has gained much attention in recent years, with most studies of this pathway focusing on its role in aging. However, the UPR mt has also been studied in the context of cancer. More recent work suggests that rather than a single mutation or alternation, specific combinatorial mtDNA landscapes able to activate the UPR mt may be those that are selected by metastatic cells, while mtDNA landscapes unable to activate the UPR mt do not. This review aims at offering an overview of the confusing literature on mtDNA mutations and metastasis and the more recent work on the UPR mt in this setting.

What cost mitochondria? The maintenance of functional mitochondrial DNA within and across generations

PubMed Central

Aanen, Duur K.; Spelbrink, Johannes N.; Beekman, Madeleine

2014-01-01

The peculiar biology of mitochondrial DNA (mtDNA) potentially has detrimental consequences for organismal health and lifespan. Typically, eukaryotic cells contain multiple mitochondria, each with multiple mtDNA genomes. The high copy number of mtDNA implies that selection on mtDNA functionality is relaxed. Furthermore, because mtDNA replication is not strictly regulated, within-cell selection may favour mtDNA variants with a replication advantage, but a deleterious effect on cell fitness. The opportunities for selfish mtDNA mutations to spread are restricted by various organism-level adaptations, such as uniparental transmission, germline mtDNA bottlenecks, germline selection and, during somatic growth, regular alternation between fusion and fission of mitochondria. These mechanisms are all hypothesized to maintain functional mtDNA. However, the strength of selection for maintenance of functional mtDNA progressively declines with age, resulting in age-related diseases. Furthermore, organismal adaptations that most probably evolved to restrict the opportunities for selfish mtDNA create secondary problems. Owing to predominantly maternal mtDNA transmission, recombination among mtDNA from different individuals is highly restricted or absent, reducing the scope for repair. Moreover, maternal inheritance precludes selection against mtDNA variants with male-specific effects. We finish by discussing the consequences of life-history differences among taxa with respect to mtDNA evolution and make a case for the use of microorganisms to experimentally manipulate levels of selection. PMID:24864309

mtDNA lineage analysis of mouse L-cell lines reveals the accumulation of multiple mtDNA mutants and intermolecular recombination

PubMed Central

Fan, Weiwei; Lin, Chun Shi; Potluri, Prasanth; Procaccio, Vincent; Wallace, Douglas C.

2012-01-01

The role of mitochondrial DNA (mtDNA) mutations and mtDNA recombination in cancer cell proliferation and developmental biology remains controversial. While analyzing the mtDNAs of several mouse L cell lines, we discovered that every cell line harbored multiple mtDNA mutants. These included four missense mutations, two frameshift mutations, and one tRNA homopolymer expansion. The LA9 cell lines lacked wild-type mtDNAs but harbored a heteroplasmic mixture of mtDNAs, each with a different combination of these variants. We isolated each of the mtDNAs in a separate cybrid cell line. This permitted determination of the linkage phase of each mtDNA and its physiological characteristics. All of the polypeptide mutations inhibited their oxidative phosphorylation (OXPHOS) complexes. However, they also increased mitochondrial reactive oxygen species (ROS) production, and the level of ROS production was proportional to the cellular proliferation rate. By comparing the mtDNA haplotypes of the different cell lines, we were able to reconstruct the mtDNA mutational history of the L–L929 cell line. This revealed that every heteroplasmic L-cell line harbored a mtDNA that had been generated by intracellular mtDNA homologous recombination. Therefore, deleterious mtDNA mutations that increase ROS production can provide a proliferative advantage to cancer or stem cells, and optimal combinations of mutant loci can be generated through recombination. PMID:22345519

Pharmacological characterization of human recombinant melatonin mt1 and MT2 receptors

PubMed Central

Browning, Christopher; Beresford, Isabel; Fraser, Neil; Giles, Heather

2000-01-01

We have pharmacologically characterized recombinant human mt1 and MT2 receptors, stably expressed in Chinese hamster ovary cells (CHO-mt1 and CHO-MT2), by measurement of [3H]-melatonin binding and forskolin-stimulated cyclic AMP (cAMP) production. [3H]-melatonin bound to mt1 and MT2 receptors with pKD values of 9.89 and 9.56 and Bmax values of 1.20 and 0.82 pmol mg−1 protein, respectively. Whilst most melatonin receptor agonists had similar affinities for mt1 and MT2 receptors, a number of putative antagonists had substantially higher affinities for MT2 receptors, including luzindole (11 fold), GR128107 (23 fold) and 4-P-PDOT (61 fold). In both CHO-mt1 and CHO-MT2 cells, melatonin inhibited forskolin-stimulated accumulation of cyclic AMP in a concentration-dependent manner (pIC50 9.53 and 9.74, respectively) causing 83 and 64% inhibition of cyclic AMP production at 100 nM, respectively. The potencies of a range of melatonin receptor agonists were determined. At MT2 receptors, melatonin, 2-iodomelatonin and 6-chloromelatonin were essentially equipotent, whilst at the mt1 receptor these agonists gave the rank order of potency of 2-iodomelatonin>melatonin>6-chloromelatonin. In both CHO-mt1 and CHO-MT2 cells, melatonin-induced inhibition of forskolin-stimulated cyclic AMP production was antagonized in a concentration-dependent manner by the melatonin receptor antagonist luzindole, with pA2 values of 5.75 and 7.64, respectively. Melatonin-mediated responses were abolished by pre-treatment of cells with pertussis toxin, consistent with activation of Gi/Go G-proteins. This is the first report of the use of [3H]-melatonin for the characterization of recombinant mt1 and MT2 receptors. Our results demonstrate that these receptor subtypes have distinct pharmacological profiles. PMID:10696085

In vivo-folded metal-metallothionein 3 complexes reveal the Cu-thionein rather than Zn-thionein character of this brain-specific mammalian metallothionein.

PubMed

Artells, Ester; Palacios, Oscar; Capdevila, Mercè; Atrian, Sílvia

2014-03-01

Metallothionein-3 (MT3) is one of the four mammalian metallothioneins (MT), and is constitutively synthesized in the brain. MT3 acts both intracellularly and extracellularly in this organ, performing functions related to neuronal growth and physiological metal (Zn and Cu) handling. It appears to be involved in the prevention of neurodegenerative disorders caused by insoluble Cu-peptide aggregates, as it triggers a Zn-Cu swap that may counteract the deleterious presence of copper in neural tissues. The literature data on MT3 coordination come from studies either on apo-MT3 reconstitution or the reaction of Zn-MT3 with Cu(2+) , an ion that is hardly present inside cells. To ascertain the MT3 metal-binding features in a scenario closer to the reductive cell cytoplasm, a study of the recombinant Zn(2+) , Cd(2+) and Cu(+) complexes of MT3, βMT3, and αMT3, as well as the in vitro Zn(2+) -Cd(2+) and Zn(2+) -Cu(+) replacement processes, is presented here. We conclude that MT3 has a Cu-thionein character that is stronger than that of the MT1 and MT2 isoforms - also present in the mammalian brain - which is mainly contributed by its β domain. In contrast, the α domain retains a high capacity to bind Zn(2+) ions, and, consequently, the entire MT3 peptide shows a peculiar dual ability to handle both metal ions. The nature of the formed Cu(+) -MT3 complexes oscillates from heterometallic Cu6 Zn4 -MT3 to homometallic Cu10 -MT3 major species, in a narrow Cu concentration range. Therefore, the entire MT3 peptide shows a high capacity to bind Cu(+) , provided that this occurs in a nonoxidative milieux. This reflects a peculiar property of this MT isoform, which accurately senses different Cu contents in the environment in which it is synthesized. © 2014 FEBS.

The efficacy of manual therapy and exercise for treating non-specific neck pain: A systematic review

PubMed Central

Hidalgo, Benjamin; Hall, Toby; Bossert, Jean; Dugeny, Axel; Cagnie, Barbara; Pitance, Laurent

2017-01-01

OBJECTIVE: To review and update the evidence for different forms of manual therapy (MT) and exercise for patients with different stages of non-specific neck pain (NP). Data sources: MEDLINE, Cochrane-Register-of-Controlled-Trials, PEDro, EMBASE. METHOD: A qualitative systematic review covering a period from January 2000 to December 2015 was conducted according to updated-guidelines. Specific inclusion criteria only on RCTs were used; including differentiation according to stages of NP (acute – subacute [ASNP] or chronic [CNP]), as well as sub-classification based on type of MT interventions: MT1 (HVLA manipulation); MT2 (mobilization and/or soft-tissue-techniques); MT3 (MT1 + MT2); and MT4 (Mobilization-with-Movement). In each sub-category, MT could be combined or not with exercise and/or usual medical care. RESULTS: Initially 121 studies were identified for potential inclusion. Based on qualitative and quantitative evaluation criteria, 23 RCTs were identified for review. Evidence for ASNP: MODERATE-evidence: In favour of (i) MT1 to the cervical spine (Cx) combined with exercises when compared to MT1 to the thoracic spine (Tx) combined with exercises; (ii) MT3 to the Cx and Tx combined with exercise compared to MT2 to the Cx with exercise or compared to usual medical care for pain and satisfaction with care from short to long-term. Evidence for CNP: STRONG-evidence: Of no difference of efficacy between MT2 at the symptomatic Cx level(s) in comparison to MT2 on asymptomatic Cx level(s) for pain and function. MODERATE to STRONG-evidence: In favour of MT1 and MT3 on Cx and Tx with exercise in comparison to exercise or MT alone for pain, function, satisfaction with care and general-health from short to moderate-terms. MODERATE-evidence: In favour (i) of MT1 as compared to MT2 and MT4, all applied to the Cx, for neck mobility, and pain in the very short term; (ii) of MT2 using sof-tissue-techniques to the Cx and Tx or MT3 to the Cx and Tx in comparison to no-treatment in the short-term for pain and disability. CONCLUSION: This systematic review updates the evidence for MT combined or not with exercise and/or usual medical care for different stages of NP and provides recommendations for future studies. Two majors points could be highlighted, the first one is that combining different forms of MT with exercise is better than MT or exercise alone, and the second one is that mobilization need not be applied at the symptomatic level(s) for improvements of NP patients. These both points may have clinical implications for reducing the risk involved with some MT techniques applied to the cervical spine. PMID:28826164

The Multipartite Mitochondrial Genome of Liposcelis bostrychophila: Insights into the Evolution of Mitochondrial Genomes in Bilateral Animals

PubMed Central

Yuan, Ming-Long; Dou, Wei; Barker, Stephen C.; Wang, Jin-Jun

2012-01-01

Booklice (order Psocoptera) in the genus Liposcelis are major pests to stored grains worldwide and are closely related to parasitic lice (order Phthiraptera). We sequenced the mitochondrial (mt) genome of Liposcelis bostrychophila and found that the typical single mt chromosome of bilateral animals has fragmented into and been replaced by two medium-sized chromosomes in this booklouse; each of these chromosomes has about half of the genes of the typical mt chromosome of bilateral animals. These mt chromosomes are 8,530 bp (mt chromosome I) and 7,933 bp (mt chromosome II) in size. Intriguingly, mt chromosome I is twice as abundant as chromosome II. It appears that the selection pressure for compact mt genomes in bilateral animals favors small mt chromosomes when small mt chromosomes co-exist with the typical large mt chromosomes. Thus, small mt chromosomes may have selective advantages over large mt chromosomes in bilateral animals. Phylogenetic analyses of mt genome sequences of Psocodea (i.e. Psocoptera plus Phthiraptera) indicate that: 1) the order Psocoptera (booklice and barklice) is paraphyletic; and 2) the order Phthiraptera (the parasitic lice) is monophyletic. Within parasitic lice, however, the suborder Ischnocera is paraphyletic; this differs from the traditional view that each suborder of parasitic lice is monophyletic. PMID:22479490

Parallel loss of nuclear-encoded mitochondrial aminoacyl-tRNA synthetases and mtDNA-encoded tRNAs in Cnidaria.

PubMed

Haen, Karri M; Pett, Walker; Lavrov, Dennis V

2010-10-01

Unlike most animal mitochondrial (mt) genomes, which encode a set of 22 transfer RNAs (tRNAs) sufficient for mt protein synthesis, those of cnidarians have only retained one or two tRNA genes. Whether the missing cnidarian mt-tRNA genes relocated outside the main mt chromosome or were lost remains unclear. It is also unknown what impact the loss of tRNA genes had on other components of the mt translational machinery. Here, we explored the nuclear genome of the cnidarian Nematostella vectensis for the presence of mt-tRNA genes and their corresponding mt aminoacyl-tRNA synthetases (mt-aaRS). We detected no candidates for mt-tRNA genes and only two mt-aaRS orthologs. At the same time, we found that all but one cytosolic aaRS appear to be targeted to mitochondria. These results indicate that the loss of mt-tRNAs in Cnidaria is genuine and occurred in parallel with the loss of nuclear-encoded mt-aaRS. Our phylogenetic analyses of individual aaRS revealed that although the nearly total loss of mt-aaRS is rare, aaRS gene deletion and replacement have occurred throughout the evolution of Metazoa.

Potential role of alpha-synuclein and metallothionein in lead-induced inclusion body formation.

PubMed

Zuo, Peijun; Qu, Wei; Cooper, Ryan N; Goyer, Robert A; Diwan, Bhalchandra A; Waalkes, Michael P

2009-09-01

Lead (Pb) produces aggresome-like inclusion bodies (IBs) in target cells as a toxic response. Our prior work shows metallothionein (MT) is required for this process. We used MT-I/II double knockout (MT-null) and parental wild-type (WT) cell lines to further explore the formation process of Pb-induced IBs. Unlike WT cells, MT-null cells did not form IBs after Pb exposure. Western blot of cytosol showed soluble MT protein in WT cells was lost during Pb exposure as IBs formed. Transfection of MT-I into MT-null cells allowed IBs formation after Pb exposure. Considering Pb-induced IBs may be like disease-related aggresomes, which often contain alpha-synuclein (Scna), we investigated Scna expression in cells capable (WT) and incapable (MT-null) of producing IBs after Pb exposure. Scna protein showed poor basal expression in MT-null cells. Pb exposure increased Scna expression only in WT cells. MT transfection increased Scna transcript to WT levels. In WT or MT-transfected MT-null cells, Pb-induced Scna expression rapidly increased and then decreased over 48 h as Pb-induced IBs were formed. A direct interaction between Scna and MT was confirmed ex vivo by antibody pulldown assay where the proteins coprecipitated with an antibody to MT. Pb exposure caused increased colocalization of MT and Scna proteins with time only in WT cells. In WT mice after chronic Pb exposure Scna was localized in renal cells containing forming IBs, whereas MT-null mice did not form IBs. Thus, Scna could be component of Pb-induced IBs and, with MT, may play a role in IBs formation.

Mitochondrial ATPase Subunit 6 and Cytochrome B Gene Variations in Obese Turkish Children

PubMed Central

Demir, Durkadın; Türkkahraman, Doğa; Samur, Anıl Aktaş; Lüleci, Güven; Akçurin, Sema; M. Alper, Özgül

2014-01-01

Objective: Due to the importance of energy metabolism in mitochondria, mitochondrial genome variations are evaluated in energy-related diseases such as obesity. To date, several nuclear genes were found to be related to obesity. Our aim in this study was to investigate the presence of polymorphisms in mitochondrial ATPase subunit 6 (mt-ATP6) and cytochrome b (mt-CytB) genes that may be associated with childhood obesity. Methods: The mt-ATP6 and mt-CytB genes were amplified and entirely sequenced in a series of 100 obese and in an equal number of healthy Turkish children aged between 6-14 years. Results: A total of 118 synonymous and nonsynonymous variations were detected in the obese and control groups. Only two previously reported synonymous substitutions (mt.8614T>C and mt.8994G>A) in the mt-ATP6 gene were found to be significantly higher in the obese group compared to the control group (p<0.05). In the mt-ATP6 gene, one novel nonsynonymous substitution (mt.8726C>T) and one novel synonymous substitution (mt.9108A>T) were found. In the mt-CytB gene, one nonsynonymous substitution (mt.14880T>C) and two synonymous substitutions (mt.14891C>T and mt.15091C>T) were novel substitutions. Conclusion: Two synonymous substitutions (mt.8614T>C and mt.8994G>A) in the mt-ATP6 gene may be associated with childhood obesity. Our study provides the first data about mitochondrial genome variations in a Turkish obese population and also the first in obese children. More cases should be screened in obese groups in order to understand the effects of mitochondrial polymorphisms in the development of obesity. PMID:25541891

A reduced number of mtSNPs saturates mitochondrial DNA haplotype diversity of worldwide population groups.

PubMed

Salas, Antonio; Amigo, Jorge

2010-05-03

The high levels of variation characterising the mitochondrial DNA (mtDNA) molecule are due ultimately to its high average mutation rate; moreover, mtDNA variation is deeply structured in different populations and ethnic groups. There is growing interest in selecting a reduced number of mtDNA single nucleotide polymorphisms (mtSNPs) that account for the maximum level of discrimination power in a given population. Applications of the selected mtSNP panel range from anthropologic and medical studies to forensic genetic casework. This study proposes a new simulation-based method that explores the ability of different mtSNP panels to yield the maximum levels of discrimination power. The method explores subsets of mtSNPs of different sizes randomly chosen from a preselected panel of mtSNPs based on frequency. More than 2,000 complete genomes representing three main continental human population groups (Africa, Europe, and Asia) and two admixed populations ("African-Americans" and "Hispanics") were collected from GenBank and the literature, and were used as training sets. Haplotype diversity was measured for each combination of mtSNP and compared with existing mtSNP panels available in the literature. The data indicates that only a reduced number of mtSNPs ranging from six to 22 are needed to account for 95% of the maximum haplotype diversity of a given population sample. However, only a small proportion of the best mtSNPs are shared between populations, indicating that there is not a perfect set of "universal" mtSNPs suitable for all population contexts. The discrimination power provided by these mtSNPs is much higher than the power of the mtSNP panels proposed in the literature to date. Some mtSNP combinations also yield high diversity values in admixed populations. The proposed computational approach for exploring combinations of mtSNPs that optimise the discrimination power of a given set of mtSNPs is more efficient than previous empirical approaches. In contrast to precedent findings, the results seem to indicate that only few mtSNPs are needed to reach high levels of discrimination power in a population, independently of its ancestral background.

Metallothionein deficiency aggravates depleted uranium-induced nephrotoxicity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hao, Yuhui; Huang, Jiawei; Gu, Ying

Depleted uranium (DU) has been widely used in both civilian and military activities, and the kidney is the main target organ of DU during acute high-dose exposures. In this study, the nephrotoxicity caused by DU in metallothionein-1/2-null mice (MT −/−) and corresponding wild-type (MT +/+) mice was investigated to determine any associations with MT. Each MT −/− or MT +/+ mouse was pretreated with a single dose of DU (10 mg/kg, intraperitoneal injection) or an equivalent volume of saline. After 4 days of DU administration, kidney changes were assessed. After DU exposure, serum creatinine and serum urea nitrogen in MTmore » −/− mice significantly increased than in MT +/+ mice, with more severe kidney pathological damage. Moreover, catalase and superoxide dismutase (SOD) decreased, and generation of reactive oxygen species and malondialdehyde increased in MT −/− mice. The apoptosis rate in MT −/− mice significantly increased, with a significant increase in both Bax and caspase 3 and a decrease in Bcl-2. Furthermore, sodium-glucose cotransporter (SGLT) and sodium-phosphate cotransporter (NaPi-II) were significantly reduced after DU exposure, and the change of SGLT was more evident in MT −/− mice. Finally, exogenous MT was used to evaluate the correlation between kidney changes induced by DU and MT doses in MT −/− mice. The results showed that, the pathological damage and cell apoptosis decreased, and SOD and SGLT levels increased with increasing dose of MT. In conclusion, MT deficiency aggravated DU-induced nephrotoxicity, and the molecular mechanisms appeared to be related to the increased oxidative stress and apoptosis, and decreased SGLT expression. - Highlights: • MT −/− and MT +/+ mice were used to evaluate nephrotoxicity of DU. • Renal damage was more evident in the MT −/− mice after exposure to DU. • Exogenous MT also protects against DU-induced nephrotoxicity. • MT deficiency induced more ROS and apoptosis after exposure to DU. • MT deficiency down-regulated SGLT expression after exposure to DU.« less

A Reduced Number of mtSNPs Saturates Mitochondrial DNA Haplotype Diversity of Worldwide Population Groups

PubMed Central

Salas, Antonio; Amigo, Jorge

2010-01-01

Background The high levels of variation characterising the mitochondrial DNA (mtDNA) molecule are due ultimately to its high average mutation rate; moreover, mtDNA variation is deeply structured in different populations and ethnic groups. There is growing interest in selecting a reduced number of mtDNA single nucleotide polymorphisms (mtSNPs) that account for the maximum level of discrimination power in a given population. Applications of the selected mtSNP panel range from anthropologic and medical studies to forensic genetic casework. Methodology/Principal Findings This study proposes a new simulation-based method that explores the ability of different mtSNP panels to yield the maximum levels of discrimination power. The method explores subsets of mtSNPs of different sizes randomly chosen from a preselected panel of mtSNPs based on frequency. More than 2,000 complete genomes representing three main continental human population groups (Africa, Europe, and Asia) and two admixed populations (“African-Americans” and “Hispanics”) were collected from GenBank and the literature, and were used as training sets. Haplotype diversity was measured for each combination of mtSNP and compared with existing mtSNP panels available in the literature. The data indicates that only a reduced number of mtSNPs ranging from six to 22 are needed to account for 95% of the maximum haplotype diversity of a given population sample. However, only a small proportion of the best mtSNPs are shared between populations, indicating that there is not a perfect set of “universal” mtSNPs suitable for all population contexts. The discrimination power provided by these mtSNPs is much higher than the power of the mtSNP panels proposed in the literature to date. Some mtSNP combinations also yield high diversity values in admixed populations. Conclusions/Significance The proposed computational approach for exploring combinations of mtSNPs that optimise the discrimination power of a given set of mtSNPs is more efficient than previous empirical approaches. In contrast to precedent findings, the results seem to indicate that only few mtSNPs are needed to reach high levels of discrimination power in a population, independently of its ancestral background. PMID:20454657

Drosophila nuclear factor DREF regulates the expression of the mitochondrial DNA helicase and mitochondrial transcription factor B2 but not the mitochondrial translation factor B1

PubMed Central

Fernández-Moreno, Miguel A.; Hernández, Rosana; Adán, Cristina; Roberti, Marina; Bruni, Francesco; Polosa, Paola Loguercio; Cantatore, Palmiro; Matsushima, Yuichi; Kaguni, Laurie S.; Garesse, Rafael

2016-01-01

DREF [DRE (DNA replication-related element)-binding factor] controls the transcription of numerous genes in Drosophila, many involved in nuclear DNA (nDNA) replication and cell proliferation, three in mitochondrial DNA (mtDNA) replication and two in mtDNA transcription termination. In this work, we have analysed the involvement of DREF in the expression of the known remaining genes engaged in the minimal mtDNA replication (d-mtDNA helicase) and transcription (the activator d-mtTFB2) machineries and of a gene involved in mitochondrial mRNA translation (d-mtTFB1). We have identified their transcriptional initiation sites and DRE sequences in their promoter regions. Gel-shift and chromatin immunoprecipitation assays demonstrate that DREF interacts in vitro and in vivo with the d-mtDNA helicase and d-mtTFB2, but not with the d-mtTFB1 promoters. Transient transfection assays in Drosophila S2 cells with mutated DRE motifs and truncated promoter regions show that DREF controls the transcription of d-mtDNA helicase and d-mtTFB2, but not that of d-mtTFB1. RNA interference of DREF in S2 cells reinforces these results showing a decrease in the mRNA levels of d-mtDNA helicase and d-mtTFB2 and no changes in those of the d-mtTFB1. These results link the genetic regulation of nuclear DNA replication with the genetic control of mtDNA replication and transcriptional activation in Drosophila. PMID:23916463

mtDNA recombination in a natural population.

PubMed

Saville, B J; Kohli, Y; Anderson, J B

1998-02-03

Variation in mtDNA has been used extensively to draw inferences in phylogenetics and population biology. In the majority of eukaryotes investigated, transmission of mtDNA is uniparental and clonal, with genotypic diversity arising from mutation alone. In other eukaryotes, the transmission of mtDNA is biparental or primarily uniparental with the possibility of "leakage" from the minority parent. In these cases, heteroplasmy carries the potential for recombination between mtDNAs of different descent. In fungi, such mtDNA recombination has long been documented but only in laboratory experiments and only under conditions in which heteroplasmy is ensured. Despite this experimental evidence, mtDNA recombination has not been to our knowledge documented in a natural population. Because evidence from natural populations is prerequisite to understanding the evolutionary impact of mtDNA recombination, we investigated the possibility of mtDNA recombination in an organism with the demonstrated potential for heteroplasmy in laboratory matings. Using nucleotide sequence data, we report here that the genotypic structure of mtDNA in a natural population of the basidiomycete fungus Armillaria gallica is inconsistent with purely clonal mtDNA evolution and is fully consistent with mtDNA recombination.

Characterization and expression of a metallothionein gene in the aquatic fern Azolla filiculoides under heavy metal stress.

PubMed

Schor-Fumbarov, Tamar; Goldsbrough, Peter B; Adam, Zach; Tel-Or, Elisha

2005-12-01

A cDNA encoding a type 2 metallothionein (MT) was isolated from Azolla filiculoides, termed AzMT2, accession no. AF482470. The AzMT2 transcript was expressed in sterile A. filiculoides that were free of the cyanobiont Anabaena azollae after erythromycin treatment, proving that AzMT2 is encoded by the fern genome. AzMT2 RNA expression was enhanced by the addition of Cd(+2), Cu(+2), Zn(+2) and Ni(+2) to the growth medium. The transcript level of AzMT2 correlated with the metal content in the plants. Temporal analysis of AzMT2 expression demonstrated that Cd(2+) and Ni(2+) induction of AzMT2 RNA expression occurred within 48 h. AzMT2-enhanced expression responded more intensely to the toxic Cd and Ni ions in A. filiculoides suggesting that AzMT2 may participate in detoxification mechanism. The more moderate response of AzMT2 to Zn and Cu ions, which are essential micronutrients, suggest a role for AzMT2 in metal homeostasis.

Metallothionein blocks oxidative DNA damage induced by acute inorganic arsenic exposure

DOE Office of Scientific and Technical Information (OSTI.GOV)

Qu, Wei, E-mail: qu@niehs.nih.gov; Waalkes, Michael P.

We studied how protein metallothionein (MT) impacts arsenic-induced oxidative DNA damage (ODD) using cells that poorly express MT (MT-I/II double knockout embryonic cells; called MT-null cells) and wild-type (WT) MT competent cells. Arsenic (as NaAsO{sub 2}) was less cytolethal over 24 h in WT cells (LC{sub 50} = 11.0 ± 1.3 μM; mean ± SEM) than in MT-null cells (LC{sub 50} = 5.6 ± 1.2 μM). ODD was measured by the immuno-spin trapping method. Arsenic (1 or 5 μM; 24 h) induced much less ODD in WT cells (121% and 141% of control, respectively) than in MT-null cells (202% andmore » 260%). In WT cells arsenic caused concentration-dependent increases in MT expression (transcript and protein), and in the metal-responsive transcription factor-1 (MTF-1), which is required to induce the MT gene. In contrast, basal MT levels were not detectable in MT-null cells and unaltered by arsenic exposure. Transfection of MT-I gene into the MT-null cells markedly reduced arsenic-induced ODD levels. The transport genes, Abcc1 and Abcc2 were increased by arsenic in WT cells but either showed no or very limited increases in MT-null cells. Arsenic caused increases in oxidant stress defense genes HO-1 and GSTα2 in both WT and MT-null cells, but to much higher levels in WT cells. WT cells appear more adept at activating metal transport systems and oxidant response genes, although the role of MT in these responses is unclear. Overall, MT protects against arsenic-induced ODD in MT competent cells by potential sequestration of scavenging oxidant radicals and/or arsenic. - Highlights: • Metallothionein blocks arsenic toxicity. • Metallothionein reduces arsenic-induced DNA damage. • Metallothionein may bind arsenic or radicals produced by arsenic.« less

Pathogenic role of mtDNA duplications in mitochondrial diseases associated with mtDNA deletions.

PubMed

Odoardi, Francesca; Rana, Michele; Broccolini, Aldobrando; Mirabella, Massimiliano; Modoni, Anna; D'Amico, Adele; Papacci, Manuela; Tonali, Pietro; Servidei, Serenella; Silvestri, Gabriella

2003-04-30

We estimated the frequency of multiple mtDNA rearrangements by Southern blot in 32 patients affected by mitochondrial disorders associated with single deletions in order to assess genotype-phenotype correlations and elucidate the pathogenic significance of mtDNA duplications. Muscle in situ hybridization studies were performed in patients showing mtDNA duplications at Southern blot. We found multiple rearrangements in 12/32 (37.5%) patients; in particular, mtDNA duplications were detected in 4/4 Kearns-Sayre syndrome (KSS), in 1 Pearson's syndrome, in 1/3 encephalomyopathies with progressive external ophthalmoplegia (PEO), and in 2/23 PEO. In situ studies documented an exclusive accumulation of deleted mtDNAs in cytochrome c oxidase negative fibers of patients with mtDNA duplications. The presence of mtDNA duplications significantly correlated with onset of symptoms before age 15 and occurrence of clinical multisystem involvement. Analysis of biochemical data documented a predominant reduction of complex III in patients without duplications compared to patients with mtDNA duplications. Our data indicate that multiple mtDNA rearrangements are detectable in a considerable proportion of patients with single deletions and that mtDNA duplications do not cause any oxidative impairment. They more likely play a pathogenic role in the determination of clinical expression of mitochondrial diseases associated with single mtDNA deletions, possibly generating deleted mtDNAs in embryonic tissues by homologous recombination. Copyright 2003 Wiley-Liss, Inc.

Adjusting MtDNA Quantification in Whole Blood for Peripheral Blood Platelet and Leukocyte Counts.

PubMed

Hurtado-Roca, Yamilee; Ledesma, Marta; Gonzalez-Lazaro, Monica; Moreno-Loshuertos, Raquel; Fernandez-Silva, Patricio; Enriquez, Jose Antonio; Laclaustra, Martin

2016-01-01

Alterations of mitochondrial DNA copy number (mtDNAcn) in the blood (mitochondrial to nuclear DNA ratio) appear associated with several systemic diseases, including primary mitochondrial disorders, carcinogenesis, and hematologic diseases. Measuring mtDNAcn in DNA extracted from whole blood (WB) instead of from peripheral blood mononuclear cells or buffy coat may yield different results due to mitochondrial DNA present in platelets. The aim of this work is to quantify the contribution of platelets to mtDNAcn in whole blood [mtDNAcn(WB)] and to propose a correction formula to estimate leukocytes' mtDNAcn [mtDNAcn(L)] from mtDNAcn(WB). Blood samples from 10 healthy adults were combined with platelet-enriched plasma and saline solution to produce artificial blood preparations. Aliquots of each sample were combined with five different platelet concentrations. In 46 of these blood preparations, mtDNAcn was measured by qPCR. MtDNAcn(WB) increased 1.07 (95%CI 0.86, 1.29; p<0.001) per 1000 platelets present in the preparation. We proved that leukocyte count should also be taken into account as mtDNAcn(WB) was inversely associated with leukocyte count; it increased 1.10 (95%CI 0.95, 1.25, p<0.001) per unit increase of the ratio between platelet and leukocyte counts. If hematological measurements are available, subtracting 1.10 the platelets/leukocyte ratio from mtDNAcn(WB) may serve as an estimation for mtDNAcn(L). Both platelet and leukocyte counts in the sample are important sources of variation if comparing mtDNAcn among groups of patients when mtDNAcn is measured in DNA extracted from whole blood. Not taking the platelet/leukocyte ratio into account in whole blood measurements, may lead to overestimation and misclassification if interpreted as leukocytes' mtDNAcn.

Feasibility study of a combined treatment of electromyography-triggered neuromuscular stimulation and mirror therapy in stroke patients: a randomized crossover trial.

PubMed

Kojima, Kosuke; Ikuno, Koki; Morii, Yuta; Tokuhisa, Kentaro; Morimoto, Shigeru; Shomoto, Koji

2014-01-01

Mirror therapy (MT) and electromyography-triggered neuromuscular stimulation (ETMS) are both effective treatments for impaired upper limbs following stroke. A combination of these two treatments (ETMS-MT) may result in greater gain than either treatment alone. The feasibility and possible effects of ETMS-MT upon upper extremity function were investigated in stroke patients. Thirteen post-acute stroke patients were randomly assigned to an immediate ETMS-MT group or a delayed ETMS-MT group and then underwent an 8-week training program. The immediate ETMS-MT group received ETMS-MT in addition to physical and occupational therapy (PT+OT) for 4 weeks. They then received only PT+OT for the next 4 weeks. In the delayed ETMS-MT group, interventions were provided in the reverse order. The main outcome measure was the Fugl-Meyer Assessment (FMA). The immediate ETMS-MT group showed significantly greater gain in FMA in the first 4 weeks. The delayed ETMS-MT group showed significantly greater gain in active range of motion during the latter 4 weeks. No adverse effects were reported following ETMS-MT. ETMS-MT might be as effective as independent MT or ETMS without causing any side effects. Future research should focus upon the direct comparisons between independent and combined interventions.

Genome sequence of two members of the chloroaromatic-degrading MT community: Pseudomonas reinekei MT1 and Achromobacter xylosoxidans MT3.

PubMed

Gutierrez-Urrutia, Izabook; Miossec, Matthieu J; Valenzuela, Sandro L; Meneses, Claudio; Dos Santos, Vitor A P Martins; Castro-Nallar, Eduardo; Poblete-Castro, Ignacio

2018-06-10

We describe the genome sequence of Pseudomonas reinekei MT1 and Achromobacter xylosoxidans MT3, the most abundant members of a bacterial community capable of degrading chloroaromatic compounds. The MT1 genome contains open reading frames encoding enzymes responsible for the catabolism of chlorosalicylate, methylsalicylate, chlorophenols, phenol, benzoate, p-coumarate, phenylalanine, and phenylacetate. On the other hand, the MT3 strain genome possesses no ORFs to metabolize chlorosalicylates; instead the bacterium is capable of metabolizing nitro-phenolic and phenolic compounds, which can be used as the only carbon and energy source by MT3. We also confirmed that MT3 displays the genetic machinery for the metabolism of chlorocathecols and chloromuconates, where the latter are toxic compounds secreted by MT1 when degrading chlorosalicylates. Altogether, this work will advance our fundamental understanding of bacterial interactions. Copyright © 2018 Elsevier B.V. All rights reserved.

Combining afferent stimulation and mirror therapy for rehabilitating motor function, motor control, ambulation, and daily functions after stroke.

PubMed

Lin, Keh-chung; Huang, Pai-chuan; Chen, Yu-ting; Wu, Ching-yi; Huang, Wen-ling

2014-02-01

Mirror therapy (MT) and mesh glove (MG) afferent stimulation may be effective in reducing motor impairment after stroke. A hybrid intervention of MT combined with MG (MT + MG) may broaden aspects of treatment benefits. To demonstrate the comparative effects of MG + MT, MT, and a control treatment (CT) on the outcomes of motor impairments, manual dexterity, ambulation function, motor control, and daily function. Forty-three chronic stroke patients with mild to moderate upper extremity impairment were randomly assigned to receive MT + MG, MT, or CT for 1.5 hours/day, 5 days/week for 4 weeks. Outcome measures were the Fugl-Meyer Assessment (FMA) and muscle tone measured by Myoton-3 for motor impairment and the Box and Block Test (BBT) and 10-Meter Walk Test (10 MWT) for motor function. Secondary outcomes included kinematic parameters for motor control and the Motor Activity Log and ABILHAND Questionnaire for daily function. FMA total scores were significantly higher and synergistic shoulder abduction during reach was less in the MT + MG and MT groups compared with the CT group. Performance on the BBT and the 10 MWT (velocity and stride length in self-paced task and velocity in as-quickly-as-possible task) were improved after MT + MG compared with MT. MT + MG improved manual dexterity and ambulation. MT + MG and MT reduced motor impairment and synergistic shoulder abduction more than CT. Future studies may integrate functional task practice into treatments to enhance functional outcomes in patients with various levels of motor severity. The long-term effects of MG + MT remain to be evaluated.

Metallothionein turnover in mammalian cell lines: implications in drug resistance

DOE Office of Scientific and Technical Information (OSTI.GOV)

Monia, B.P.; Butt, T.R.; Ecker, D.J.

1986-05-01

Metallothioneins (MT) are low molecular weight, cysteine-rich proteins believed to participate in metal detoxification. A wide variety of cells in culture have been shown to accumulate MT in response to metal administration. These metal-induced increases in MT levels result from an increased rate of MT gene transcription, MT mRNA accumulation, and MT synthesis. Turnover of Cd-, Zn- and Au-induced MT was studied in a Chinese Hamster Ovary (CHO) cell line which was resistant to Cd and the Au-containing drug Auranofin (AF). Cd, Zn and Au were potent inducers of MT mRNA and accumulated approximately equal amounts of mRNA under themore » conditions employed in this study. Pulse-chase studies utilizing (/sup 35/S)cysteine revealed that the half-life of Au-, Zn- and Cd-induced MT was 0.75, 10 and 24 hrs. respectively. The reported differences in the tertiary structure of Au-MT from that of Cd-MT lead us to propose that the differences in half-lives observed reflect differences in subceptibility to intracellular proteolysis, which in turn, may effect the ability of MT to confer resistance to various metals.« less

Multi scale modeling of 2450MHz electric field effects on microtubule mechanical properties.

PubMed

Setayandeh, S S; Lohrasebi, A

2016-11-01

Microtubule (MT) rigidity and response to 2450MHz electric fields were investigated, via multi scale modeling approach. For this purpose, six systems were designed and simulated to consider all types of feasible interactions between α and β monomers in MT, by using all atom molecular dynamics method. Subsequently, coarse grain modeling was used to design different lengths of MT. Investigation of effects of external 2450MHz electric field on MT showed MT less rigidity in the presence of such field, which may perturb its functions. Moreover, an additional computational setup was designed to study effects of 2450MHz field on MT response to AFM tip. It was found, more tip velocity led to MT faster transformation and less time was required to change MT elastic response to plastic one, applying constant radius. Moreover it was observed smaller tip caused to increase required time to change MT elastic response to plastic one, considering constant velocity. Furthermore, exposing MT to 2450MHz field led to no significant changes in MT response to AFM tip, but quick change in MT elastic response to plastic one. Copyright © 2016 Elsevier Inc. All rights reserved.

Evaluating use and outcomes of mobility technology: a multiple stakeholder analysis.

PubMed

Hammel, Joy; Southall, Kenneth; Jutai, Jeffrey; Finlayson, Marcia; Kashindi, Gabriel; Fok, Daniel

2013-07-01

This qualitative, multi-site study compared and contrasted the outcomes of mobility technology (MT) and the factors influencing these outcomes from the perspective of MT users, caregivers, and professionals involved in MT service delivery. Qualitative focus groups were held in the USA and Canada with multiple stakeholder groups (consumer: n = 45, caregiver: n = 10, service provider: n = 10). Data were analyzed thematically. MT outcomes were conceptualized by participants as a match between expectations for MT and the actual outcomes experienced. Several factors influenced the match including a) MT features, b) environmental factors (e.g. built/physical environment, societal context of acceptance, MT delivery systems/policies), and c) the ability to self-manage the interaction across person, technology and environment, which involved constant negotiation and strategizing. Stakeholders identified MT outcomes that corresponded to ICF levels including body structure and function, activity, and participation across environments; however, varied on their importance and influence on MT impact. The conceptual fit model and factors related to self-management of MT represent new knowledge and provide a framework for stakeholder-based evaluation of MT outcomes. Implications for MT assessment, service delivery, outcomes research, and interventions are discussed.

Soviet Style in War. Revised Edition

DTIC Science & Technology

1992-01-01

Again, there may be "illusions that it is impossible to solve a certain problem... ," where in reality it is merely "difficult to resolve." 9 But...remarks of his superiors. However, in reality this is not the case. From higher levels orders come down, plans for measures to eliminate defects are...1943 ... there were virtually no powerful spearheads to deliver the main thrust." 354 The fall of 1943 in the Caucasus: "Combat actions during the

Sequencing Operations: The Critical Path of Operational Art,

DTIC Science & Technology

1987-05-01

while at the same time covering the withdrawal of the Army Group A forces from the Caucasus.55 In effect , Manstein had to balance the desired...the utility of the operational pause is as a method for balancing ends and means in a controlled relationship to one’s culminating point.79 This again... effects and ordering them in time and space to produce conditions that contribute to Operational success. This study approaches this investigation from

Using Their Own People Against Them: Russia’s Exploitation of Ethnicity in Georgia and Ukraine

DTIC Science & Technology

2015-12-01

N /A 10. SPONSORING / MONITORING AGENCY REPORT NUMBER 11. SUPPLEMENTARY NOTES The views expressed in this thesis are those of the author and do not...Europe Report N °224, April 10, 2013, I, http://www.crisisgroup.org/en/regions/europe/south-caucasus/georgia/224- abkhazia-the-long-road-to...military 207 Vitaly Shevchenko, “Little green men or Russian invaders?” BBC, March 11, 2014, March 11

Extension of the Caucasus Seismic Information Network Study into Central Asia

DTIC Science & Technology

2008-09-01

nuclear tests at the Semipalatinsk test site in Kazakhstan, Lop Nor in China, Pokharan in India, and Chagai in Pakistan, as well as for several peaceful... Semipalatinsk test site in Kazakhstan, Lop Nor in China, Pokharan in India, and Chagai in Pakistan, and several peaceful nuclear explosion (PNE) events...truth in tomography studies. Figures 5 and 6 show waveforms for a nuclear explosion at the Semipalatinsk Test Site in northeast Kazakhstan and for a

The Future of NATO’s Mediterranean Initiative: Evolution and Next Steps

DTIC Science & Technology

2000-01-01

the " guerra fria " between Spain and the Ottoman Empire, between Islam and the West. Views and Perspectives of the Dialogue Countries 29 Southern...crises in Asia , Russia, and Latin America place these questions in sharper relief around the Mediterranean, especially in relation to those...the Gulf, Turkey, and Israel. New pipelines from the Caucasus and central Asia may eventually provide gas to eastern and central Europe.5 As a result

Challenges in Relations between Russia and Ukraine over the Next 10 Years

DTIC Science & Technology

2009-03-16

compounds male 20 chauvinism and male chauvinist have gained so much popularity that some users may no longer recall the patriotic and other more generalized...many other countries were becoming independent, at the same time Russia was engaging in a policy of chauvinism . Chauvinism is a form of extreme and...policy of Russian chauvinism throughout the 18th-20th centuries, many nations of Eastern Europe, Central Asia and the southern Caucasus were not only

Nationalist To Transnational Insurgency: State Repression And Violent Extremist Scale Shift

DTIC Science & Technology

2016-05-26

International Foundation CE Caucasus Emirate ChRI Chechen Republic of Ichkeria COW Correlates of War FGS Federal Government of Somalia FM Field Manual FSB...literature provides a typology of conflict that can be a useful addition to US military doctrine. The Correlates of War ( COW ) typology, first presented by...wars to the COW typology in 1982 to describe wars within a state.7 Sarkees contributed to changes in the COW typology in 2000 with conflicts

Genetic evidence for an origin of the Armenians from Bronze Age mixing of multiple populations

PubMed Central

Haber, Marc; Mezzavilla, Massimo; Xue, Yali; Comas, David; Gasparini, Paolo; Zalloua, Pierre; Tyler-Smith, Chris

2016-01-01

The Armenians are a culturally isolated population who historically inhabited a region in the Near East bounded by the Mediterranean and Black seas and the Caucasus, but remain under-represented in genetic studies and have a complex history including a major geographic displacement during World War I. Here, we analyse genome-wide variation in 173 Armenians and compare them with 78 other worldwide populations. We find that Armenians form a distinctive cluster linking the Near East, Europe, and the Caucasus. We show that Armenian diversity can be explained by several mixtures of Eurasian populations that occurred between ~3000 and ~2000 bce, a period characterized by major population migrations after the domestication of the horse, appearance of chariots, and the rise of advanced civilizations in the Near East. However, genetic signals of population mixture cease after ~1200 bce when Bronze Age civilizations in the Eastern Mediterranean world suddenly and violently collapsed. Armenians have since remained isolated and genetic structure within the population developed ~500 years ago when Armenia was divided between the Ottomans and the Safavid Empire in Iran. Finally, we show that Armenians have higher genetic affinity to Neolithic Europeans than other present-day Near Easterners, and that 29% of Armenian ancestry may originate from an ancestral population that is best represented by Neolithic Europeans. PMID:26486470

Gene flow between wolf and shepherd dog populations in Georgia (Caucasus).

PubMed

Kopaliani, Natia; Shakarashvili, Maia; Gurielidze, Zurab; Qurkhuli, Tamar; Tarkhnishvili, David

2014-01-01

We studied the distribution of the mitochondrial DNA haplotypes and microsatellite genotypes at 8 loci in 102 gray wolves, 57 livestock guarding dogs, and 9 mongrel dogs from Georgia (Caucasus). Most of the studied dogs had mitochondrial haplotypes clustered with presumably East Asian dog lineages, and most of the studied wolves had the haplotypes clustered with European wolves, but 20% of wolves and 37% of dogs shared the same mitochondrial haplotypes. Bayesian inference with STRUCTURE software suggested that more than 13% of the studied wolves had detectable dog ancestry and more than 10% of the dogs had detectable wolf ancestry. About 2-3% of the sampled wolves and dogs were identified, with a high probability, as first-generation hybrids. These results were supported by the relatedness analysis, which showed that 10% of wolves and 20% of dogs had closest relatives from an opposite group. The results of the study suggest that wolf-dog hybridization is a common event in the areas where large livestock guarding dogs are held in a traditional way, and that gene flow between dogs and gray wolves was an important force influencing gene pool of dogs for millennia since early domestication events. This process may have been terminated 1) in areas outside the natural range of gray wolves and 2) since very recent time, when humans started to more tightly control contacts of purebred dogs.

[Organization and contents of the specialized surgical care in multiprofile military hospitals of the 1st level during counter-terrorist operations on the northern Caucasus (report V)].

PubMed

Gumanenko, E K; Samokhvalov, I M; Trusov, A A; Badalov, V I

2006-03-01

The principle difference of the work of multiprofile military hospitals (MMH) of the Ist level during the armed conflicts on the Northern Caucasus, particularly during the second, was rendering specialized surgical care to the primary contingent of the wounded, evacuated during the nearest hours after a wound. The incoming flow to MMH of the 1st level - in connection with the primary entering of the wounded practically from a battle field - was characterized by severity (one third of the wounded had severe and extremely severe wounds) and the significant number of the wounded with multiple and combined injuries (up to 60% of the wounded). Effective treatment of the above-mentioned wounded can only be carried by specially trained surgeons in appropriately-equipped multiprofile medical hospitals. The rendered volume of specialized surgical care in MMH of the 1st level included the following operations: neurosurgical (2,4%), thoracoabdominal (19,8%), traumatologic (17,0%), angiosurgical (8,2%), special (otorhinolaryngologic, maxillofacial, ophthalmologic, urologic) - 17,7%, general surgery (35,4%). During the armed conflict of 1999-2002 due to the introduction of the early specialized surgical care concept three MMH of the 1st level in the advanced way executed 86,4 % of all complex operations in medical units and hospitals of the combat zone.

Sublithospheric flows in the mantle

NASA Astrophysics Data System (ADS)

Trifonov, V. G.; Sokolov, S. Yu.

2017-11-01

The estimated rates of upper mantle sublithospheric flows in the Hawaii-Emperor Range and Ethiopia-Arabia-Caucasus systems are reported. In the Hawaii-Emperor Range system, calculation is based on motion of the asthenospheric flow and the plate moved by it over the branch of the Central Pacific plume. The travel rate has been determined based on the position of variably aged volcanoes (up to 76 Ma) with respect to the active Kilauea Volcano. As for the Ethiopia-Arabia-Caucasus system, the age of volcanic eruptions (55-2.8 Ma) has been used to estimate the asthenospheric flow from the Ethiopian-Afar superplume in the northern bearing lines. Both systems are characterized by variations in a rate of the upper mantle flows in different epochs from 4 to 12 cm/yr, about 8 cm/yr on average. Analysis of the global seismic tomographic data has made it possible to reveal rock volumes with higher seismic wave velocities under ancient cratons; rocks reach a depth of more than 2000 km and are interpreted as detached fragments of the thickened continental lithosphere. Such volumes on both sides of the Atlantic Ocean were submerged at an average velocity of 0.9-1.0 cm/yr along with its opening. The estimated rates of the mantle flows clarify the deformation properties of the mantle and regulate the numerical models of mantle convection.

Addressing the burden of post-conflict surgical disease - strategies from the North Caucasus.

PubMed

Lunze, Karsten; Lunze, Fatima I

2011-01-01

The 2004 terror attack on a school in Beslan, North Caucasus, with more than 1300 children and their families taken hostage and 334 people killed, ended after extreme violence. Following the disaster, many survivors with blast ear injuries developed complications because no microsurgery services were available in the region. Here, we present our strategies in North Ossetia to strengthen subspecialty surgical care in a region of instable security conditions. Disaster modifies disease burden in an environment of conflict-related health-care limitations. We built on available secondary care and partnered international with local stakeholders to reach and treat victims of a humanitarian disaster. A strategy of mutual commitment resulted in treatment of all consenting Beslan victims with blast trauma sequelae and of non disaster-related patients. Credible, sustained partnerships and needs assessments beyond the immediate phases after a disaster are essential to facilitate a meaningful transition from humanitarian aid to capacity building exceeding existing insufficient standards. Psychosocial impacts of disaster might constitute a barrier to care and need to be assessed when responding to the burden of surgical disease in conflict or post-conflict settings. Involving local citizen groups in the planning process can be useful to identify and access vulnerable populations. Integration of our strategy into broader efforts might strengthen the local health system through management and leadership.

Earthquake hazard and risk assessment based on Unified Scaling Law for Earthquakes: Greater Caucasus and Crimea

NASA Astrophysics Data System (ADS)

Kossobokov, Vladimir G.; Nekrasova, Anastasia K.

2018-05-01

We continue applying the general concept of seismic risk analysis in a number of seismic regions worldwide by constructing regional seismic hazard maps based on morphostructural analysis, pattern recognition, and the Unified Scaling Law for Earthquakes (USLE), which generalizes the Gutenberg-Richter relationship making use of naturally fractal distribution of earthquake sources of different size in a seismic region. The USLE stands for an empirical relationship log10 N(M, L) = A + B·(5 - M) + C·log10 L, where N(M, L) is the expected annual number of earthquakes of a certain magnitude M within a seismically prone area of linear dimension L. We use parameters A, B, and C of USLE to estimate, first, the expected maximum magnitude in a time interval at seismically prone nodes of the morphostructural scheme of the region under study, then map the corresponding expected ground shaking parameters (e.g., peak ground acceleration, PGA, or macro-seismic intensity). After a rigorous verification against the available seismic evidences in the past (usually, the observed instrumental PGA or the historically reported macro-seismic intensity), such a seismic hazard map is used to generate maps of specific earthquake risks for population, cities, and infrastructures (e.g., those based on census of population, buildings inventory). The methodology of seismic hazard and risk assessment is illustrated by application to the territory of Greater Caucasus and Crimea.

Deoxynucleoside salvage enzymes and tissue specific mitochondrial DNA depletion.

PubMed

Wang, L

2010-06-01

Adequate mitochondrial DNA (mtDNA) copies are required for normal mitochondria function and reductions in mtDNA copy number due to genetic alterations cause tissue-specific mtDNA depletion syndrome (MDS). There are eight nuclear genes, directly or indirectly involved in mtDNA replication and mtDNA precursor synthesis, which have been identified as the cause of MDS. However, the tissue specific pathology of these nuclear gene mutations is not well understood. Here, mtDNA synthesis, mtDNA copy number control, and mtDNA turnover, as well as the synthesis of mtDNA precursors in relation to the levels of salvage enzymes are discussed. The question why MDS caused by TK2 and p53R2 mutations are predominantly muscle specific while dGK deficiency affected mainly liver will be addressed.

The mitochondrial genome of Moniliophthora roreri, the frosty pod rot pathogen of cacao.

PubMed

Costa, Gustavo G L; Cabrera, Odalys G; Tiburcio, Ricardo A; Medrano, Francisco J; Carazzolle, Marcelo F; Thomazella, Daniela P T; Schuster, Stephen C; Carlson, John E; Guiltinan, Mark J; Bailey, Bryan A; Mieczkowski, Piotr; Pereira, Gonçalo A G; Meinhardt, Lyndel W

2012-05-01

In this study, we report the sequence of the mitochondrial (mt) genome of the Basidiomycete fungus Moniliophthora roreri, which is the etiologic agent of frosty pod rot of cacao (Theobroma cacao L.). We also compare it to the mtDNA from the closely-related species Moniliophthora perniciosa, which causes witches' broom disease of cacao. The 94 Kb mtDNA genome of M. roreri has a circular topology and codes for the typical 14 mt genes involved in oxidative phosphorylation. It also codes for both rRNA genes, a ribosomal protein subunit, 13 intronic open reading frames (ORFs), and a full complement of 27 tRNA genes. The conserved genes of M. roreri mtDNA are completely syntenic with homologous genes of the 109 Kb mtDNA of M. perniciosa. As in M. perniciosa, M. roreri mtDNA contains a high number of hypothetical ORFs (28), a remarkable feature that make Moniliophthoras the largest reservoir of hypothetical ORFs among sequenced fungal mtDNA. Additionally, the mt genome of M. roreri has three free invertron-like linear mt plasmids, one of which is very similar to that previously described as integrated into the main M. perniciosa mtDNA molecule. Moniliophthora roreri mtDNA also has a region of suspected plasmid origin containing 15 hypothetical ORFs distributed in both strands. One of these ORFs is similar to an ORF in the mtDNA gene encoding DNA polymerase in Pleurotus ostreatus. The comparison to M. perniciosa showed that the 15 Kb difference in mtDNA sizes is mainly attributed to a lower abundance of repetitive regions in M. roreri (5.8 Kb vs 20.7 Kb). The most notable differences between M. roreri and M. perniciosa mtDNA are attributed to repeats and regions of plasmid origin. These elements might have contributed to the rapid evolution of mtDNA. Since M. roreri is the second species of the genus Moniliophthora whose mtDNA genome has been sequenced, the data presented here contribute valuable information for understanding the evolution of fungal mt genomes among closely-related species. Crown Copyright © 2012. Published by Elsevier Ltd. All rights reserved.

Expression of metallothionein protein in the lungs of Wistar rats and C57 and DBA mice exposed to cadmium oxide fumes.

PubMed

McKenna, I M; Gordon, T; Chen, L C; Anver, M R; Waalkes, M P

1998-12-01

Chronic exposure to inhaled cadmium (Cd) has been shown to induce lung tumors in rats (Wistar strain) but not in mice (NMRI strain). The protein metallothionein (MT) plays an important role in Cd detoxification, and it has been suggested that differential inducibility of pulmonary MT may lead to interspecies susceptibility differences to inhaled Cd. Interstrain differences in the pulmonary response of the MT gene to Cd stimuli have not been examined in rats or mice. We compared pulmonary MT expression in Wistar Furth (WF) rats with that in DBA and C57 mice, following a single 3-h exposure to CdO fumes containing 1 mg Cd/m3. Induction of the MT gene was assessed by the levels of MT-I and MT-II transcripts, MT-protein content, and number of MT-labeled alveolar and bronchiolar epithelial cells immediately after Cd exposure and 1, 3, and 5 days later. Control animals were exposed to air/argon furnace gases. We observed differential intra- and interspecies inducibility of the MT gene in the lung following Cd inhalation. DBA mice exhibited greater levels of MT-mRNA, mainly for the MT-I isoform, MT-protein content, and number of MT positive cells relative to C57 mice. WF rats showed lower transcription and translation responses of the MT gene upon Cd stimuli than C57 mice. The present results, in concert with our previous findings of higher lung cell proliferation in Cd-exposed C57 relative to DBA mice, predict greater susceptibility of C57 to the carcinogenic effects of inhaled Cd. Furthermore, the low transcriptional and translation responses of the MT gene to Cd stimuli in WF rats might explain the higher susceptibility of this rat strain to develop malignant lung tumors after chronic exposure to Cd via inhalation. Parallel to our findings in mice, differences in the responsiveness of lung MT gene may exist across rat strains. Thus intraspecies genetic variability in pulmonary MT may influence the susceptibility of rats or mice to lung carcinogenesis induced by inhalation of Cd compounds. Copyright 1998 Academic Press.

Transcription profiling suggests that mitochondrial topoisomerase IB acts as a topological barrier and regulator of mitochondrial DNA transcription.

PubMed

Dalla Rosa, Ilaria; Zhang, Hongliang; Khiati, Salim; Wu, Xiaolin; Pommier, Yves

2017-12-08

Mitochondrial DNA (mtDNA) is essential for cell viability because it encodes subunits of the respiratory chain complexes. Mitochondrial topoisomerase IB (TOP1MT) facilitates mtDNA replication by removing DNA topological tensions produced during mtDNA transcription, but it appears to be dispensable. To test whether cells lacking TOP1MT have aberrant mtDNA transcription, we performed mitochondrial transcriptome profiling. To that end, we designed and implemented a customized tiling array, which enabled genome-wide, strand-specific, and simultaneous detection of all mitochondrial transcripts. Our technique revealed that Top1mt KO mouse cells process the mitochondrial transcripts normally but that protein-coding mitochondrial transcripts are elevated. Moreover, we found discrete long noncoding RNAs produced by H-strand transcription and encompassing the noncoding regulatory region of mtDNA in human and murine cells and tissues. Of note, these noncoding RNAs were strongly up-regulated in the absence of TOP1MT. In contrast, 7S DNA, produced by mtDNA replication, was reduced in the Top1mt KO cells. We propose that the long noncoding RNA species in the D-loop region are generated by the extension of H-strand transcripts beyond their canonical stop site and that TOP1MT acts as a topological barrier and regulator for mtDNA transcription and D-loop formation.

Mirror-Touch Synaesthesia Is Not Associated with Heightened Empathy, and Can Occur with Autism

PubMed Central

Baron-Cohen, Simon; Robson, Emma; Lai, Meng-Chuan; Allison, Carrie

2016-01-01

Research has linked Mirror-Touch (MT) synaesthesia with enhanced empathy. We test the largest sample of MT synaesthetes to date to examine two claims that have been previously made: that MT synaesthetes (1) have superior empathy; and (2) only ever experience their MT synaesthesia in response to viewing a person being touched. Given that autism has been suggested to involve deficits in cognitive empathy, we also test two predictions: that MT synaesthetes should (3) be less likely than general population individuals without MT synaesthesia to have an autism spectrum condition (ASC), if MT is characterized by superior empathy; and (4) have fewer autistic traits. We selected three groups: a pure MT synaesthesia group (N = 46), a pure grapheme-colour (GC) synaesthesia group (N = 36), and a typical control group without synaesthesia (N = 46). Participants took three measures of empathy and one measure of autistic traits. MT synaesthetes did not show enhanced empathy. In addition, 30% of all MT synaesthetes recruited into this study (N = 135) reported also having ASC, and MT synaesthetes showed higher autistic trait scores than controls. Finally, some MT experiences were reported in response to viewing objects being touched. Our findings dispute the views that MT synaesthesia is linked with enhanced empathy, is less likely to occur with ASC or elevated autistic traits, and is specific to seeing a person being touched. PMID:27490947

Mirror-Touch Synaesthesia Is Not Associated with Heightened Empathy, and Can Occur with Autism.

PubMed

Baron-Cohen, Simon; Robson, Emma; Lai, Meng-Chuan; Allison, Carrie

2016-01-01

Research has linked Mirror-Touch (MT) synaesthesia with enhanced empathy. We test the largest sample of MT synaesthetes to date to examine two claims that have been previously made: that MT synaesthetes (1) have superior empathy; and (2) only ever experience their MT synaesthesia in response to viewing a person being touched. Given that autism has been suggested to involve deficits in cognitive empathy, we also test two predictions: that MT synaesthetes should (3) be less likely than general population individuals without MT synaesthesia to have an autism spectrum condition (ASC), if MT is characterized by superior empathy; and (4) have fewer autistic traits. We selected three groups: a pure MT synaesthesia group (N = 46), a pure grapheme-colour (GC) synaesthesia group (N = 36), and a typical control group without synaesthesia (N = 46). Participants took three measures of empathy and one measure of autistic traits. MT synaesthetes did not show enhanced empathy. In addition, 30% of all MT synaesthetes recruited into this study (N = 135) reported also having ASC, and MT synaesthetes showed higher autistic trait scores than controls. Finally, some MT experiences were reported in response to viewing objects being touched. Our findings dispute the views that MT synaesthesia is linked with enhanced empathy, is less likely to occur with ASC or elevated autistic traits, and is specific to seeing a person being touched.

Retroviral gene transfer of an antisense construct against membrane type 1 matrix metalloproteinase reduces the invasiveness of rheumatoid arthritis synovial fibroblasts.

PubMed

Rutkauskaite, Edita; Volkmer, Dagmar; Shigeyama, Yukio; Schedel, Jörg; Pap, Geza; Müller-Ladner, Ulf; Meinecke, Ingmar; Alexander, Dorothea; Gay, Renate E; Drynda, Susanne; Neumann, Wolfram; Michel, Beat A; Aicher, Wilhelm K; Gay, Steffen; Pap, Thomas

2005-07-01

Membrane type 1 matrix metalloproteinase (MT1-MMP) is expressed prominently in rheumatoid arthritis synovial fibroblasts (RASFs), but the specific contribution of MT1-MMP to fibroblast-mediated destruction of articular cartilage is incompletely understood. This study used gene transfer of an antisense expression construct to assess the effects of MT1-MMP inhibition on the invasiveness of RASFs. Retroviral gene transfer of a pLXIN vector-based antisense RNA expression construct (MT1-MMPalphaS) to MT1-MMP was used to stably transduce RASFs. Levels of MT1-MMP RNA and protein were determined by quantitative polymerase chain reaction, Western blotting, and immunocytochemistry in MT1-MMPalphaS-transduced RASFs as well as in control cells, with monitoring for 60 days. The effects of MT1-MMPalphaS on the invasiveness of RASFs were analyzed in the SCID mouse co-implantation model of RA. MT1-MMPalphaS-transduced RASFs produced high levels of antisense RNA that exceeded endogenous levels of MT1-MMP messenger RNA by 15-fold and resulted in a down-regulation of MT1-MMP at the protein level. Inhibition of MT1-MMP production was maintained for 60 days and significantly reduced the invasiveness of RASFs in the SCID mouse model. Whereas prominent invasion into cartilage by non-transduced and mock-transduced RASFs was observed (mean invasion scores 3.0 and 3.1, respectively), MT1-MMPalphaS-transduced cells showed only moderate invasiveness (mean invasion score 1.8; P < 0.05). The data demonstrate that an antisense RNA expression construct against MT1-MMP can be generated and expressed in RASFs for at least 60 days. Inhibition of MT1-MMP significantly reduces the cartilage degradation by RASFs.

Barley Metallothioneins: MT3 and MT4 Are Localized in the Grain Aleurone Layer and Show Differential Zinc Binding1[W][OA

PubMed Central

Hegelund, Josefine Nymark; Schiller, Michaela; Kichey, Thomas; Hansen, Thomas Hesselhøj; Pedas, Pai; Husted, Søren; Schjoerring, Jan Kofod

2012-01-01

Metallothioneins (MTs) are low-molecular-weight, cysteine-rich proteins believed to play a role in cytosolic zinc (Zn) and copper (Cu) homeostasis. However, evidence for the functional properties of MTs has been hampered by methodological problems in the isolation and characterization of the proteins. Here, we document that barley (Hordeum vulgare) MT3 and MT4 proteins exist in planta and that they differ in tissue localization as well as in metal coordination chemistry. Combined transcriptional and histological analyses showed temporal and spatial correlations between transcript levels and protein abundance during grain development. MT3 was present in tissues of both maternal and filial origin throughout grain filling. In contrast, MT4 was confined to the embryo and aleurone layer, where it appeared during tissue specialization and remained until maturity. Using state-of-the-art speciation analysis by size-exclusion chromatography inductively coupled plasma mass spectrometry and electrospray ionization time-of-flight mass spectrometry on recombinant MT3 and MT4, their specificity and capacity for metal ion binding were quantified, showing a strong preferential Zn binding relative to Cu and cadmium (Cd) in MT4, which was not the case for MT3. When complementary DNAs from barley MTs were expressed in Cu- or Cd-sensitive yeast mutants, MT3 provided a much stronger complementation than did MT4. We conclude that MT3 may play a housekeeping role in metal homeostasis, while MT4 may function in Zn storage in developing and mature grains. The localization of MT4 and its discrimination against Cd make it an ideal candidate for future biofortification strategies directed toward increasing food and feed Zn concentrations. PMID:22582132

Barley metallothioneins: MT3 and MT4 are localized in the grain aleurone layer and show differential zinc binding.

PubMed

Hegelund, Josefine Nymark; Schiller, Michaela; Kichey, Thomas; Hansen, Thomas Hesselhøj; Pedas, Pai; Husted, Søren; Schjoerring, Jan Kofod

2012-07-01

Metallothioneins (MTs) are low-molecular-weight, cysteine-rich proteins believed to play a role in cytosolic zinc (Zn) and copper (Cu) homeostasis. However, evidence for the functional properties of MTs has been hampered by methodological problems in the isolation and characterization of the proteins. Here, we document that barley (Hordeum vulgare) MT3 and MT4 proteins exist in planta and that they differ in tissue localization as well as in metal coordination chemistry. Combined transcriptional and histological analyses showed temporal and spatial correlations between transcript levels and protein abundance during grain development. MT3 was present in tissues of both maternal and filial origin throughout grain filling. In contrast, MT4 was confined to the embryo and aleurone layer, where it appeared during tissue specialization and remained until maturity. Using state-of-the-art speciation analysis by size-exclusion chromatography inductively coupled plasma mass spectrometry and electrospray ionization time-of-flight mass spectrometry on recombinant MT3 and MT4, their specificity and capacity for metal ion binding were quantified, showing a strong preferential Zn binding relative to Cu and cadmium (Cd) in MT4, which was not the case for MT3. When complementary DNAs from barley MTs were expressed in Cu- or Cd-sensitive yeast mutants, MT3 provided a much stronger complementation than did MT4. We conclude that MT3 may play a housekeeping role in metal homeostasis, while MT4 may function in Zn storage in developing and mature grains. The localization of MT4 and its discrimination against Cd make it an ideal candidate for future biofortification strategies directed toward increasing food and feed Zn concentrations.

Association of metallothionein-III with oligodendroglial cytoplasmic inclusions in multiple system atrophy.

PubMed

Pountney, D L; Dickson, T C; Power, J H T; Vickers, J C; West, A J; Gai, W P

2011-01-01

Multiple system atrophy (MSA) is an adult-onset neurodegenerative disease characterised by Parkinsonian and autonomic symptoms and by widespread intracytoplasmic inclusion bodies in oligodendrocytes. These glial cytoplasmic inclusions (GCIs) are comprised of 9-10 nm filaments rich in the protein alpha-synuclein, also found in neuronal inclusion bodies associated with Parkinson's disease. Metallothioneins (MTs) are a class of low-molecular weight (6-7 kDa), cysteine-rich metal-binding proteins the expression of which is induced by heavy metals, glucocorticoids, cytokines and oxidative stress. Recent studies have shown a role for the ubiquitously expressed MT-I/II isoforms in the brain following a variety of stresses, whereas, the function of the brain-specific MT isoform, MT-III, is less clear. MT-III and MT-I/II immunostaining of post-mortem tissue in MSA and normal control human brains showed that the number of MT-III-positive cells is significantly increased in MSA in visual cortex, whereas MT-I/II isoforms showed no significant difference in the distribution of immunopositive cells in MSA compared to normal tissue. GCIs were immunopositive for MT-III, but were immunonegative for the MT-I/II isoforms. Immunofluorescence double labelling showed the co-localisation of alpha-synuclein and MT-III in GCIs in MSA tissue. In isolated GCIs, transmission electron microscopy demonstrated MT-III immunogold labelling of the amorphous material surrounding alpha-synuclein filaments in GCIs. High-molecular weight MT-III species in addition to MT-III monomer were detected in GCIs by Western analysis of the detergent-solubilised proteins of purified GCIs. These results show that MT-III, but not MT-I/II, is a specific component of GCIs, present in abnormal aggregated forms external to the alpha-synuclein filaments.

Cattle phenotypes can disguise their maternal ancestry.

PubMed

Srirattana, Kanokwan; McCosker, Kieren; Schatz, Tim; St John, Justin C

2017-06-26

Cattle are bred for, amongst other factors, specific traits, including parasite resistance and adaptation to climate. However, the influence and inheritance of mitochondrial DNA (mtDNA) are not usually considered in breeding programmes. In this study, we analysed the mtDNA profiles of cattle from Victoria (VIC), southern Australia, which is a temperate climate, and the Northern Territory (NT), the northern part of Australia, which has a tropical climate, to determine if the mtDNA profiles of these cattle are indicative of breed and phenotype, and whether these profiles are appropriate for their environments. A phylogenetic tree of the full mtDNA sequences of different breeds of cattle, which were obtained from the NCBI database, showed that the mtDNA profiles of cattle do not always reflect their phenotype as some cattle with Bos taurus phenotypes had Bos indicus mtDNA, whilst some cattle with Bos indicus phenotypes had Bos taurus mtDNA. Using D-loop sequencing, we were able to contrast the phenotypes and mtDNA profiles from different species of cattle from the 2 distinct cattle breeding regions of Australia. We found that 67 of the 121 cattle with Bos indicus phenotypes from NT (55.4%) had Bos taurus mtDNA. In VIC, 92 of the 225 cattle with Bos taurus phenotypes (40.9%) possessed Bos indicus mtDNA. When focusing on oocytes from cattle with the Bos taurus phenotype in VIC, their respective oocytes with Bos indicus mtDNA had significantly lower levels of mtDNA copy number compared with oocytes possessing Bos taurus mtDNA (P < 0.01). However, embryos derived from oocytes with Bos indicus mtDNA had the same ability to develop to the blastocyst stage and the levels of mtDNA copy number in their blastocysts were similar to blastocysts derived from oocytes harbouring Bos taurus mtDNA. Nevertheless, oocytes originating from the Bos indicus phenotype exhibited lower developmental potential due to low mtDNA copy number when compared with oocytes from cattle with a Bos taurus phenotype. The phenotype of cattle is not always related to their mtDNA profiles. MtDNA profiles should be considered for breeding programmes as they also influence phenotypic traits and reproductive capacity in terms of oocyte quality.

Mouse models of mitochondrial DNA defects and their relevance for human disease

PubMed Central

Tyynismaa, Henna; Suomalainen, Anu

2009-01-01

Qualitative and quantitative changes in mitochondrial DNA (mtDNA) have been shown to be common causes of inherited neurodegenerative and muscular diseases, and have also been implicated in ageing. These diseases can be caused by primary mtDNA mutations, or by defects in nuclear-encoded mtDNA maintenance proteins that cause secondary mtDNA mutagenesis or instability. Furthermore, it has been proposed that mtDNA copy number affects cellular tolerance to environmental stress. However, the mechanisms that regulate mtDNA copy number and the tissue-specific consequences of mtDNA mutations are largely unknown. As post-mitotic tissues differ greatly from proliferating cultured cells in their need for mtDNA maintenance, and as most mitochondrial diseases affect post-mitotic cell types, the mouse is an important model in which to study mtDNA defects. Here, we review recently developed mouse models, and their contribution to our knowledge of mtDNA maintenance and its role in disease. PMID:19148224

MtDNA depleted PC3 cells exhibit Warburg effect and cancer stem cell features

PubMed Central

Li, Xiaoran; Zhong, Yali; Lu, Jie; Axcrona, Karol; Eide, Lars; Syljuåsen, Randi G.; Peng, Qian; Wang, Junbai; Zhang, Hongquan; Goscinski, Mariusz Adam; Kvalheim, Gunnar; Nesland, Jahn M.; Suo, Zhenhe

2016-01-01

Reducing mtDNA content was considered as a critical step in the metabolism restructuring for cell stemness restoration and further neoplastic development. However, the connections between mtDNA depletion and metabolism reprograming-based cancer cell stemness in prostate cancers are still lack of studies. Here, we demonstrated that human CRPC cell line PC3 tolerated high concentration of the mtDNA replication inhibitor ethidium bromide (EtBr) and the mtDNA depletion triggered a universal metabolic remodeling process. Failure in completing that process caused lethal consequences. The mtDNA depleted (MtDP) PC3 cells could be steadily maintained in the special medium in slow cycling status. The MtDP PC3 cells contained immature mitochondria and exhibited Warburg effect. Furthermore, the MtDP PC3 cells were resistant to therapeutic treatments and contained greater cancer stem cell-like subpopulations: CD44+, ABCG2+, side-population and ALDHbright. In conclusion, these results highlight the association of mtDNA content, mitochondrial function and cancer cell stemness features. PMID:27248169

Mitochondrial RNA polymerase is an essential enzyme in erythrocytic stages of Plasmodium falciparum.

PubMed

Ke, Hangjun; Morrisey, Joanne M; Ganesan, Suresh M; Mather, Michael W; Vaidya, Akhil B

2012-09-01

We have shown that transgenic Plasmodium falciparum parasites expressing the yeast DHODH (dihydroorotate dehydrogenase) are independent of the mtETC (mitochondrial electron transport chain), suggesting that they might not need the mitochondrial genome (mtDNA), since it only encodes three protein subunits belonging to the mtETC and fragmentary ribosomal RNA molecules. Disrupting the mitochondrial RNA polymerase (mtRNAP), which is critical for mtDNA replication and transcription, might then cause the generation of a ρ(0) parasite line lacking mtDNA. We made multiple attempts to disrupt the mtRNAP gene by double crossover recombination methods in parasite lines expressing yDHODH either episomally or integrated in the genome, but were unable to produce the desired knockout. We verified that the mtRNAP gene was accessible to recombination by successfully integrating a triple HA tag at the 3' end via single cross-over recombination. These studies suggest that mtRNAP is essential even in mtETC-independent P. falciparum parasites. Copyright © 2012 Elsevier B.V. All rights reserved.

In vivo conformation of mitochondrial DNA revealed by pulsed-field gel electrophoresis in the true slime mold, Physarum polycephalum.

PubMed

Sakurai, R; Sasaki, N; Takano, H; Abe, T; Kawano, S

2000-04-28

Pulsed-field gel electrophoresis (PFGE) was used to examine the in vivo and in vitro conformations of Physarum polycephalum mitochondrial DNA (mtDNA). We used plugs containing isolated mitochondria, isolated mitochondrial nucleoids (mt-nuclei), and isolated mtDNA, in addition to whole cells. The mtDNA contained in the myxamoebae, plasmodia, isolated mitochondria, and isolated mt-nuclei was circular, but most of the isolated mtDNA had been site-specifically fragmented and linearized during DNA preparation and storage under low ionic strength conditions. Restriction mapping of Physarum mtDNA by the direct digestion of the isolated mt-nuclei from two different strains, DP89 x AI16 and KM88 x AI16, resulted in the circular form. A linear mitochondrial plasmid, mF, is known to promote mitochondrial fusion and integration of itself into the mtDNA in Physarum. Linearization of mtDNA by the integration of the mF plasmid was demonstrated when we used PFGE to analyze isolated mitochondria from the plasmodial strain DP89 x NG7 carrying the mF plasmid (mF+). The PFGE system can be used not only to determine whether the form of mtDNA is linear or circular but also to analyze the dynamic conformational changes of mtDNA.

Gold deposits and occurrences of the Greater Caucasus, Georgia Republic: Their genesis and prospecting criteria

USGS Publications Warehouse

Kekelia, S.A.; Kekelia, M.A.; Kuloshvili, S.I.; Sadradze, N.G.; Gagnidze, N.E.; Yaroshevich, V.Z.; Asatiani, G.G.; Doebrich, J.L.; Goldfarb, R.J.; Marsh, E.E.

2008-01-01

The south-central part of the Greater Caucasus region, Georgia Republic, represents an extremely prospective region for significant orogenic gold deposits. Gold-bearing quartz veins are concentrated in two extensive WNW-trending belts, the Mestia-Racha and Svaneti districts, within the northern margin of the Southern Slope Zone of the Great Caucasus orogen. This metalliferous region is dominated by Early to Middle Jurassic slates, which are part of a terrane that likely accreted to the continental margin from late Paleozoic to Jurassic. The slates were subsequently intruded by both Middle to Late Jurassic and Neogene granitoids. Quartz veins in the more carbonaceous slate units are most consistently enriched in As, Au, Hg, Sb, and W, and show mineralization styles most consistent with typical orogenic gold deposits. Quartz veins in the Mestia-Racha district were mined in Soviet times for As, Sb, and W, but many of these are now being recognized as gold resource targets. The veins occur in the footwall of a thrust fault between the Southern Slope zone and an earlier accreted terrane, the Main Zone, to the north. Many veins in the district continue along strike for > 1??km and some cut Neogene intrusions, constraining ore formation to the most recent 4 to 5??million years. Gold deposition thus correlates with final collision of the Arabian plate to the south and uplift of the ore-hosting Greater Caucasus. The Zopkhito deposit, previously mined for antimony, contains an estimated 55??t Au at a cutoff grade of 0.5??g/t. The veins are localized in an area where smaller-order structures show a major change in strike from N-S to more E-W trends. A pyrite-arsenopyrite ore stage includes gold concentrated in both sulfide phases; it is overprinted by a later stibnite-dominant stage. Fluid-inclusion studies of ore samples from the Zopkhito deposit indicate minimum trapping temperatures of 300 to 350????C and 200 to 300????C for the two stages, respectively, and minimum trapping pressures of 0.2 to 0.5??kbar. Ore-forming fluids, with approximately 5 to 20??mol% non-aqueous gas, evolved from N2-dominant to CO2-dominant during evolution of the hydrothermal system. ??34S values of + 1 to + 4??? for ore-related sulfides at Zopkhito are consistent with a sedimentary rock source for the sulfur, and ??18O quartz measurements of 16 to 21??? are consistent with either a magmatic or metamorphic fluid. More than 60 gold-bearing lodes and placers in the Svaneti district occur along the thrust between the Southern Slope and Main Zones. Lode gold potential was first recognized in the historic placer district in the 1980s, with many auriferous quartz veins cutting Middle Jurassic igneous rocks. Brecciated veins in the 18??t Au Lukhra deposit cut a small granodioritic to dioritic stock; the latter intrudes Devonian schist immediately north of the thrust. Presently, there are three recognized ore zones in the deposit, with the most significant occurring over an area 140??m in length and 12??m-wide, with typical grades of 7 to 9??g/t Au. Reconnaissance fluid-inclusion studies of ore samples from the Lukhra deposit indicate minimum trapping temperatures of 220????C. Measurements of ??18Oquartz of about 10??? suggest buffering of isotopic composition by the igneous host rocks.

Stable isotopic compositions of carbon in vegetation and soil organic matter along the bioclimatic transect, North Caucasus

NASA Astrophysics Data System (ADS)

Kovda, Irina; Morgun, Evgeny; Golubeva, Natalia

2010-05-01

Stable isotopic composition of carbon in plant species and soil organic matter was investigated along the bioclimatic transect in the North Caucasus. The aim of this research was to find the possible shift of stable isotopic composition of carbon reflecting the gradual successive changes of landscapes connected with the changes of climatic conditions (temperature, precipitation, air humidity) at a various absolute heights above sea level i.e. along the vertical zonation. The study site was located in the North Caucasus near Arkhiz, Big Zelentchuk valley (43o33-40'N; 41o16-27'E). Soil and vegetation samples were collected along Precaucasus and Caucasus slopes at an absolute heights interval of 1280 - 2065 m. Soils are formed at eluvo-deluvium of noncarbonated silicate massive rocks under warm temperate climate with MAT 4-5oC and MAP ~ 860 mm and more. Samples of vegetation (whole grasses and tree leaves) represented several altitudinal vegetation belts including forest and subalpine belts with coniferous (pine, spruce, fir), mixed coniferous-deciduous (fir + beech), broad-leaved (beech, maple), small-leaved (birch, aspen) forests, elfin birch wood and subalpine meadows. Stable isotope composition of carbon was determined using IRMS Finnigan Delta V+. Stable isotopic composition of vegetal species ranges from -33.04 to -27.29 o/oo with the general trend of lighter δ13С with the decreasing of absolute heights. The most heavier δ13С = ~ -27o/oo were found in subalpine meadow plants, while at a smaller altitudes in the forest belt δ13С shifts to ~ 30-31, and up to ~ - 32-33o/oo. More clear regularities were found for vegetation specimens grouped into three categories such as "trees", "grasses" and "litter". δ13С of each category clearly shifts to the lighter values with the decrease of absolute heights i.e from subalpine meadows to spruce-broad-leaved forests. δ13С shift is about 2,49o/oo for trees, 1,75-4,92 o/oo for grasses and ~ 1,8 o/oo for the litter. The complimentary determination of δ15N have shown large variability from -3,59 to + 18,24o/oo which corresponds with the expected large variation of δ15N of plant debris and general trend of lighter δ15N during the decomposition. δ13С of soil organic matter varies from -28.92 to -24.99 o/oo. The similar trend for lighter stable isotopic composition of carbon at a lower absolute heights i.e. in forest belt was found for soil organic matter. The whole picture of δ13С values in soil samples is quite complicated and needs further investigation. As a result, the isotopic characteristic of carbon and nitrogen in vegetal specimens, and carbon in soil organic matter were obtained along a bioclimatic topocatena. The general trend of lighter C isotopic composition was found. It is known that lighter isotopic composition correlates with cooler and/or wetter climate. While the temperature gradually decreases upward, the changes of precipitation are not linear. Further research is needed to better explain the variation of stable isotopic compositions in dependence of those climatic factors. This research was supported by the Presidium of Russian Academy of Sciences, Program 14

Mindfulness training attenuates the increase in salivary cortisol concentration associated with competition in highly trained wheelchair-basketball players.

PubMed

MacDonald, Luke A; Minahan, Clare L

2018-02-01

This study determined the effect of 8 wk of mindfulness training (MT) on salivary cortisol (sCort) and rate of salivary Immunoglobulin-A (sIgA) secretion in wheelchair-basketball players during a competition period. The mindful group completed 8 weeks of MT in addition to training and competition. sCort and rate of sIgA secretion were measured at baseline, at 2-week intervals, the end and 2 weeks following the intervention. A significant time and group interaction was observed for sCort (F = 3.297, P = 0.040, ES = 0.191); sCort increased in the control group from MT-BL to MT-2wk (P = 0.001) and remained significantly elevated at MT-4wk (P = 0.013) and MT-6wk (P = 0.002). sCort decreased from MT-6wk to MT-8wk (P < 0.001) and concentrations were not different at MT-8wk and Post-2wk to MT-BL (P > 0.05). Mindful group sCort increased from MT-BL to MT-2wk (P = 0.042) but decreased to concentrations no different to MT-BL for the rest of the intervention period (P > 0.05). There were no group differences in rate of sIgA secretion during the intervention (P = 0.810). It was concluded that 8 weeks of MT attenuated the increase in sCort associated with the competition period.

Differential Regulation of Cell Proliferation and Apoptosis by Melatonin Receptor Subtype-Signaling in the Adult Murine Brain.

PubMed

Fredrich, Michaela; Christ, Elmar; Korf, Horst-Werner

2018-06-27

Background/Aims: Zeitgeber time (ZT)-dependent changes in cell proliferation and apoptosis are regulated by melatonin receptor (MT)-mediated signaling in the adult hippocampus and hypothalamic-hypophyseal system. There are two G-protein-coupled MT-subtypes, MT1 and MT2. Therefore, the present study examined which MT-subtype is required for regulation of ZT-dependent changes in cell proliferation and/or apoptosis in the adult murine brain and pituitary. Adult melatonin-proficient (C3H) mice with targeted deletion of MT1 (MT1 KO) or MT2 (MT2 KO) were adapted to a 12-hour light, 12-hour dark photoperiod and sacrificed at ZT00, ZT06, ZT12, and ZT18. Immunohistochemistry for Ki67 or activated caspase-3 served to quantify proliferating and apoptotic cells in the hippocampal subgranular zone (SGZ) and granule cell layer, the hypothalamic median eminence (ME), and the hypophyseal pars tuberalis. ZT-dependent changes in cell proliferation were found exclusively in the SGZ and ME of MT1 KO mice, while apoptosis showed no ZT-dependent changes in the regions analyzed, neither in MT1 nor in MT2 KO mice. Comparison with our previous studies in C3H mice with functional MTs and MT1/2 KO mice revealed that MT2-mediated signaling is required and sufficient for ZT-dependent changes in cell proliferation in the SGZ and ME, while ZT-dependent changes in apoptosis require signaling from both MT-subtypes. Our results indicate that generation and timing of ZT-dependent changes in cell proliferation and apoptosis by melatonin require different MT-subtype-constellations and emphasize the importance to shed light on the specific function of each receptor-subtype in different tissues and physiological conditions.
. ©2018S. Karger AG, Basel.

44 CFR 15.3 - Access to Mt. Weather.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 44 Emergency Management and Assistance 1 2013-10-01 2013-10-01 false Access to Mt. Weather. 15.3... HOMELAND SECURITY GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY TRAINING CENTER § 15.3 Access to Mt. Weather. Mt. Weather contains classified material and areas...

44 CFR 15.3 - Access to Mt. Weather.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 44 Emergency Management and Assistance 1 2012-10-01 2011-10-01 true Access to Mt. Weather. 15.3... HOMELAND SECURITY GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY TRAINING CENTER § 15.3 Access to Mt. Weather. Mt. Weather contains classified material and areas...

44 CFR 15.3 - Access to Mt. Weather.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 44 Emergency Management and Assistance 1 2010-10-01 2010-10-01 false Access to Mt. Weather. 15.3... HOMELAND SECURITY GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY TRAINING CENTER § 15.3 Access to Mt. Weather. Mt. Weather contains classified material and areas...

44 CFR 15.3 - Access to Mt. Weather.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 44 Emergency Management and Assistance 1 2014-10-01 2014-10-01 false Access to Mt. Weather. 15.3... HOMELAND SECURITY GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY TRAINING CENTER § 15.3 Access to Mt. Weather. Mt. Weather contains classified material and areas...

44 CFR 15.3 - Access to Mt. Weather.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 44 Emergency Management and Assistance 1 2011-10-01 2011-10-01 false Access to Mt. Weather. 15.3... HOMELAND SECURITY GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY TRAINING CENTER § 15.3 Access to Mt. Weather. Mt. Weather contains classified material and areas...

Heteromeric MT1/MT2 Melatonin Receptors Modulate Photoreceptor Function

PubMed Central

Baba, Kenkichi; Benleulmi-Chaachoua, Abla; Journé, Anne-Sophie; Kamal, Maud; Guillaume, Jean-Luc; Dussaud, Sébastien; Gbahou, Florence; Yettou, Katia; Liu, Cuimei; Contreras-Alcantara, Susana; Jockers, Ralf; Tosini, Gianluca

2013-01-01

The formation of G protein-coupled receptor (GPCR) heteromers elicits signaling diversification and holds great promise for improved drug selectivity. Most studies have been conducted in heterologous expression systems; however, in vivo validation is missing from most cases thus questioning the physiological significance of GPCR heteromerization. Melatonin MT1 and MT2 receptors have been shown to exist as homo- and heteromers in vitro. We show here that the effect of melatonin on rod photoreceptor light sensitivity is mediated by melatonin MT1/MT2 receptor heteromers. This effect involves activation of the heteromer-specific PLC/PKC pathway and is abolished in MT1−/− and MT2−/− mice as well as in mice overexpressing a non-functional MT2 receptor mutant that competes with the formation of functional MT1/MT2 heteromers in photoreceptor cells. This study establishes the essential role of melatonin receptor heteromers in retinal function and supports the physiological importance of GPCR heteromerization. Finally, our work may have important therapeutic implications, as the heteromer complex may provide a unique pharmacological target to improve photoreceptor functioning and to extend the viability of photoreceptors during aging. PMID:24106342

A tethering mechanism controls the processivity and kinetochore-microtubule plus-end enrichment of the kinesin-8 Kif18A

PubMed Central

Stumpff, Jason; Du, Yaqing; English, Chauca A.; Maliga, Zoltan; Wagenbach, Michael; Asbury, Charles L.; Wordeman, Linda; Ohi, Ryoma

2011-01-01

Summary Metaphase chromosome positioning depends on Kif18A, a kinesin-8 that accumulates at and suppresses the dynamics of K-MT plus ends. By engineering Kif18A mutants that suppress MT dynamics but fail to concentrate at K-MT plus-ends, we identify a mechanism that allows Kif18A to accumulate at K-MT plus ends to a level required to suppress chromosome movements. Enrichment of Kif18A at K-MT plus-ends depends on its C-terminal tail domain, while the ability of Kif18A to suppress MT growth is conferred by the N-terminal motor domain. The Kif18A tail contains a second MT-binding domain that diffuses along the MT lattice, suggesting that it tethers the motor to the MT track. Consistently, the tail enhances Kif18A processivity and is crucial for it to accumulate at K-MT plus-ends. The heightened processivity of Kif18A, conferred by its tail domain, thus promotes concentration of Kif18A at K-MT plus-ends, where it suppresses their dynamics to control chromosome movements. PMID:21884977

Drosophila mitochondrial transcription factor B1 modulates mitochondrial translation but not transcription or DNA copy number in Schneider cells.

PubMed

Matsushima, Yuichi; Adán, Cristina; Garesse, Rafael; Kaguni, Laurie S

2005-04-29

We report the cloning and molecular analysis of Drosophila mitochondrial transcription factor (d-mtTF) B1. An RNA interference (RNAi) construct was designed that reduces expression of d-mtTFB1 to 5% of its normal level in Schneider cells. In striking contrast with our previous study on d-mtTFB2, we found that RNAi knock-down of d-mtTFB1 does not change the abundance of specific mitochondrial RNA transcripts, nor does it affect the copy number of mitochondrial DNA. In a corollary manner, overexpression of d-mtTFB1 did not increase either the abundance of mitochondrial RNA transcripts or mitochondrial DNA copy number. Our data suggest that, unlike d-mtTFB2, d-mtTFB1 does not have a critical role in either transcription or regulation of the copy number of mitochondrial DNA. Instead, because we found that RNAi knockdown of d-mtTFB1 reduces mitochondrial protein synthesis, we propose that it serves its primary role in modulating translation. Our work represents the first study to document the role of mtTFB1 in vivo and establishes clearly functional differences between mtTFB1 and mtTFB2.

Crosstalk between mitochondrial stress signals regulates yeast chronological lifespan.

PubMed

Schroeder, Elizabeth A; Shadel, Gerald S

2014-01-01

Mitochondrial DNA (mtDNA) exists in multiple copies per cell and is essential for oxidative phosphorylation. Depleted or mutated mtDNA promotes numerous human diseases and may contribute to aging. Reduced TORC1 signaling in the budding yeast, Saccharomyces cerevisiae, extends chronological lifespan (CLS) in part by generating a mitochondrial ROS (mtROS) signal that epigenetically alters nuclear gene expression. To address the potential requirement for mtDNA maintenance in this response, we analyzed strains lacking the mitochondrial base-excision repair enzyme Ntg1p. Extension of CLS by mtROS signaling and reduced TORC1 activity, but not caloric restriction, was abrogated in ntg1Δ strains that exhibited mtDNA depletion without defects in respiration. The DNA damage response (DDR) kinase Rad53p, which transduces pro-longevity mtROS signals, is also activated in ntg1Δ strains. Restoring mtDNA copy number alleviated Rad53p activation and re-established CLS extension following mtROS signaling, indicating that Rad53p senses mtDNA depletion directly. Finally, DDR kinases regulate nucleus-mitochondria localization dynamics of Ntg1p. From these results, we conclude that the DDR pathway senses and may regulate Ntg1p-dependent mtDNA stability. Furthermore, Rad53p senses multiple mitochondrial stresses in a hierarchical manner to elicit specific physiological outcomes, exemplified by mtDNA depletion overriding the ability of Rad53p to transduce an adaptive mtROS longevity signal. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

Differential Expression of Metallothionein Isoforms in Terrestrial Snail Embryos Reflects Early Life Stage Adaptation to Metal Stress

PubMed Central

Baurand, Pierre-Emmanuel; Pedrini-Martha, Veronika; de Vaufleury, Annette; Niederwanger, Michael; Capelli, Nicolas; Scheifler, Renaud; Dallinger, Reinhard

2015-01-01

The aim of this study was to analyze the expression of three metallothionein (MT) isoform genes (CdMT, CuMT and Cd/CuMT), already known from adults, in the Early Life Stage (ELS) of Cantareus aspersus. This was accomplished by detection of the MT isoform-specific transcription adopting Polymerase Chain Reaction (PCR) amplification and quantitative Real Time (qRT)-PCR of the three MT genes. Freshly laid eggs were kept for 24 hours under control conditions or exposed to three cadmium (Cd) solutions of increasing concentration (5, 10, and 15 mg Cd/L). The transcription of the three MT isoform genes was detected via PCR in 1, 6 and 12-day-old control or Cd-exposed embryos. Moreover, the transcription of this isoform genes during development was followed by qRT-PCR in 6 and 12-day-old embryos. Our results showed that the CdMT and Cd/CuMT genes, but not the CuMT gene, are expressed in embryos at the first day of development. The transcription of the 3 MT genes in control embryos increased with development time, suggesting that the capacities of metal regulation and detoxification may have gradually increased throughout embryogenesis. However in control embryos, the most highly expressed MT gene was that of the Cd/CuMT isoform, whose transcription levels greatly exceeded those of the other two MT genes. This contrasts with the minor significance of this gene in adult snails and suggests that in embryos, this isoform may play a comparatively more important role in metal physiology compared to adult individuals. This function in adult snails appears not to be related to Cd detoxification. Instead, snail embryos responded to Cd exposure by over-expression of the CdMT gene in a concentration-dependent manner, whereas the expression of the Cd/CuMT gene remained unaffected. Moreover, our study demonstrates the ability of snail embryos to respond very early to Cd exposure by up-regulation of the CdMT gene. PMID:25706953

In vivo imaging of membrane type-1 matrix metalloproteinase with a novel activatable near-infrared fluorescence probe.

PubMed

Shimizu, Yoichi; Temma, Takashi; Hara, Isao; Makino, Akira; Kondo, Naoya; Ozeki, Ei-Ichi; Ono, Masahiro; Saji, Hideo

2014-08-01

Membrane type-1 matrix metalloproteinase (MT1-MMP) is a protease activating MMP-2 that mediates cleavage of extracellular matrix components and plays pivotal roles in tumor migration, invasion and metastasis. Because in vivo noninvasive imaging of MT1-MMP would be useful for tumor diagnosis, we developed a novel near-infrared (NIR) fluorescence probe that can be activated following interaction with MT1-MMP in vivo. MT1-hIC7L is an activatable fluorescence probe comprised of anti-MT1-MMP monoclonal antibodies conjugated to self-assembling polymer micelles that encapsulate NIR dyes (IC7-1, λem : 858 nm) at concentrations sufficient to cause fluorescence self-quenching. In aqueous buffer, MT1-hIC7L fluorescence was suppressed to background levels and increased approximately 35.5-fold in the presence of detergent. Cellular uptake experiments revealed that in MT1-MMP positive C6 glioma cells, MT1-hIC7L showed significantly higher fluorescence that increased with time as compared to hIC7L, a negative control probe lacking the anti-MT1-MMP monoclonal antibody. In MT1-MMP negative MCF-7 breast adenocarcinoma cells, both MT1-hIC7L and hIC7L showed no obvious fluorescence. In addition, the fluorescence intensity of C6 cells treated with MT1-hIC7L was suppressed by pre-treatment with an MT1-MMP endocytosis inhibitor (P < 0.05). In vivo optical imaging using probes intravenously administered to tumor-bearing mice showed that MT1-hIC7L specifically visualized C6 tumors (tumor-to-background ratios: 3.8 ± 0.3 [MT1-hIC7L] vs 3.1 ± 0.2 [hIC7L] 48 h after administration, P < 0.05), while the probes showed similarly low fluorescence in MCF-7 tumors. Together, these results show that MT1-hIC7L would be a potential activatable NIR probe for specifically detecting MT1-MMP-expressing tumors. © 2014 The Authors. Cancer Science published by Wiley Publishing Asia Pty Ltd on behalf of Japanese Cancer Association.

The mitochondrial genome of the gymnosperm Cycas taitungensis contains a novel family of short interspersed elements, Bpu sequences, and abundant RNA editing sites.

PubMed

Chaw, Shu-Miaw; Shih, Arthur Chun-Chieh; Wang, Daryi; Wu, Yu-Wei; Liu, Shu-Mei; Chou, The-Yuan

2008-03-01

The mtDNA of Cycas taitungensis is a circular molecule of 414,903 bp, making it 2- to 6-fold larger than the known mtDNAs of charophytes and bryophytes, but similar to the average of 7 elucidated angiosperm mtDNAs. It is characterized by abundant RNA editing sites (1,084), more than twice the number found in the angiosperm mtDNAs. The A + T content of Cycas mtDNA is 53.1%, the lowest among known land plants. About 5% of the Cycas mtDNA is composed of a novel family of mobile elements, which we designated as "Bpu sequences." They share a consensus sequence of 36 bp with 2 terminal direct repeats (AAGG) and a recognition site for the Bpu 10I restriction endonuclease (CCTGAAGC). Comparison of the Cycas mtDNA with other plant mtDNAs revealed many new insights into the biology and evolution of land plant mtDNAs. For example, the noncoding sequences in mtDNAs have drastically expanded as land plants have evolved, with abrupt increases appearing in the bryophytes, and then in the seed plants. As a result, the genomic organizations of seed plant mtDNAs are much less compact than in other plants. Also, the Cycas mtDNA appears to have been exempted from the frequent gene loss observed in angiosperm mtDNAs. Similar to the angiosperms, the 3 Cycas genes nad1, nad2, and nad5 are disrupted by 5 group II intron squences, which have brought the genes into trans-splicing arrangements. The evolutionary origin and invasion/duplication mechanism of the Bpu sequences in Cycas mtDNA are hypothesized and discussed.

Mitochondrial DNA damage is associated with damage accrual and disease duration in patients with Systemic Lupus Erythematosus

PubMed Central

López-López, Linnette; Nieves-Plaza, Mariely; Castro, María del R.; Font, Yvonne M.; Torres-Ramos, Carlos; Vilá, Luis M.; Ayala-Peña, Sylvette

2014-01-01

Objective To determine the extent of mitochondrial DNA (mtDNA) damage in systemic lupus erythematosus (SLE) patients compared to healthy subjects and to determine the factors associated with mtDNA damage among SLE patients. Methods A cross-sectional study was performed in 86 SLE patients (per American College of Rheumatology classification criteria) and 86 healthy individuals matched for age and gender. Peripheral blood mononuclear cells (PBMCs) were collected from subjects to assess the relative amounts of mtDNA damage. Quantitative polymerase chain reaction assay was used to measure the frequency of mtDNA lesions and mtDNA abundance. Socioeconomic-demographic features, clinical manifestations, pharmacologic treatment, disease activity, and damage accrual were determined. Statistical analyses were performed using t test, pairwise correlation, and Pearson’s chi-square test (or Fisher’s exact test) as appropriate. Results Among SLE patients, 93.0% were women. The mean (SD) age was 38.0 (10.4) years and the mean (SD) disease duration was 8.7 (7.5) years. SLE patients exhibited increased levels of mtDNA damage as shown by higher levels of mtDNA lesions and decreased mtDNA abundance as compared to healthy individuals. There was a negative correlation between disease damage and mtDNA abundance and a positive correlation between mtDNA lesions and disease duration. No association was found between disease activity and mtDNA damage. Conclusion PBMCs from SLE patients exhibited more mtDNA damage compared to healthy subjects. Higher levels of mtDNA damage were observed among SLE patients with major organ involvement and damage accrual. These results suggest that mtDNA damage have a potential role in the pathogenesis of SLE. PMID:24899636

Mitochondrial DNA damage is associated with damage accrual and disease duration in patients with systemic lupus erythematosus.

PubMed

López-López, L; Nieves-Plaza, M; Castro, M del R; Font, Y M; Torres-Ramos, C A; Vilá, L M; Ayala-Peña, S

2014-10-01

To determine the extent of mitochondrial DNA (mtDNA) damage in systemic lupus erythematosus (SLE) patients compared to healthy subjects and to determine the factors associated with mtDNA damage among SLE patients. A cross-sectional study was performed in 86 SLE patients (per American College of Rheumatology classification criteria) and 86 healthy individuals matched for age and gender. Peripheral blood mononuclear cells (PBMCs) were collected from subjects to assess the relative amounts of mtDNA damage. Quantitative polymerase chain reaction assay was used to measure the frequency of mtDNA lesions and mtDNA abundance. Socioeconomic-demographic features, clinical manifestations, pharmacologic treatment, disease activity, and damage accrual were determined. Statistical analyses were performed using t test, pairwise correlation, and Pearson's chi-square test (or Fisher's exact test) as appropriate. Among SLE patients, 93.0% were women. The mean (SD) age was 38.0 (10.4) years and the mean (SD) disease duration was 8.7 (7.5) years. SLE patients exhibited increased levels of mtDNA damage as shown by higher levels of mtDNA lesions and decreased mtDNA abundance as compared to healthy individuals. There was a negative correlation between disease damage and mtDNA abundance and a positive correlation between mtDNA lesions and disease duration. No association was found between disease activity and mtDNA damage. PBMCs from SLE patients exhibited more mtDNA damage compared to healthy subjects. Higher levels of mtDNA damage were observed among SLE patients with major organ involvement and damage accrual. These results suggest that mtDNA damage have a potential role in the pathogenesis of SLE. © The Author(s) 2014 Reprints and permissions: sagepub.co.uk/journalsPermissions.nav.

Genome-Wide Identification of TCP Family Transcription Factors in Medicago truncatula Reveals Significant Roles of miR319-Targeted TCPs in Nodule Development

PubMed Central

Wang, Hongfeng; Wang, Hongwei; Liu, Rong; Xu, Yiteng; Lu, Zhichao; Zhou, Chuanen

2018-01-01

TCP proteins, the plant-specific transcription factors, are involved in the regulation of multiple aspects of plant development among different species, such as leaf development, branching, and flower symmetry. However, thus far, the roles of TCPs in legume, especially in nodulation are still not clear. In this study, a genome-wide analysis of TCP genes was carried out to discover their evolution and function in Medicago truncatula. In total, 21 MtTCPs were identified and classified into class I and class II, and the class II MtTCPs were further divided into two subclasses, CIN and CYC/TB1. The expression profiles of MtTCPs are dramatically different. The universal expression of class I MtTCPs was detected in all organs. However, the MtTCPs in CIN subclass were highly expressed in leaf and most of the members in CYC/TB1 subclass were highly expressed in flower. Such organ-specific expression patterns of MtTCPs suggest their different roles in plant development. In addition, most MtTCPs were down-regulated during the nodule development, except for the putative MtmiR319 targets, MtTCP3, MtTCP4, and MtTCP10A. Overexpression of MtmiR319A significantly reduced the expression level of MtTCP3/4/10A/10B and resulted in the decreased nodule number, indicating the important roles of MtmiR319-targeted MtTCPs in nodulation. Taken together, this study systematically analyzes the MtTCP gene family at a genome-wide level and their possible functions in nodulation, which lay the basis for further explorations of MtmiR319/MtTCPs module in association with nodule development in M. truncatula.

Uptake and depletion of plasma 17alpha-methyltestosterone during induction of masculinization in muskellunge, Esox masquinongy: effect on plasma steroids and sex reversal.

PubMed

Rinchard, J; Dabrowski, K; Garcia-Abiado, M A; Ottobre, J

1999-08-01

Oral administration of 17alpha-methyltestosterone (MT) was used to induce masculinization of sexually undifferentiated muskellunge, Esox masquinongy. Three groups of muskellunge (mean weight, 2.5 +/- 0.6 g) were submitted to MT treatment (15 mg of MT/kg) for 60 days. An additional one group was used as a control (hormone-free diet). Food was distributed over a 10-h period by using automatic belt feeders. Blood was sampled in both control and treated fish at different intervals during and after feeding: before (0 h), at 3 h, 6 h, and cessation of feeding (10 h), and after a fast of 22 h (32 h). MT had no significant effect on growth and survival in muskellunge 6 months after the treatment. Concentrations of plasma MT increased during the feeding period and reached their maximum levels 6 or 10 h after starting feeding. This rapid increase of MT indicated a rapid absorption of this steroid. Plasma MT levels then declined and reached a radir by 22 h after cessation of feeding, suggesting that MT is rapidly metabolized and excreted. The profiles of plasma testosterone during the MT treatment did not differ significantly between control and MT-treated groups. During and after the MT treatment, the concentration of plasma testosterone did not differ significantly between control and MT-treated groups. Moreover, no sexual dimorphism of testosterone levels was observed. Six months after treatment, the sex ratio in MT-treated groups (33% males, 62% females, and 5% intersex) was opposite to control (70% and 30%, respectively) and differed significantly. This suggests that at 15 mg of MT/kg over 60 days, a paradoxical feminization took place.

Functional mapping of protein-protein interactions in an enzyme complex by directed evolution.

PubMed

Roderer, Kathrin; Neuenschwander, Martin; Codoni, Giosiana; Sasso, Severin; Gamper, Marianne; Kast, Peter

2014-01-01

The shikimate pathway enzyme chorismate mutase converts chorismate into prephenate, a precursor of Tyr and Phe. The intracellular chorismate mutase (MtCM) of Mycobacterium tuberculosis is poorly active on its own, but becomes >100-fold more efficient upon formation of a complex with the first enzyme of the shikimate pathway, 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase (MtDS). The crystal structure of the enzyme complex revealed involvement of C-terminal MtCM residues with the MtDS interface. Here we employed evolutionary strategies to probe the tolerance to substitution of the C-terminal MtCM residues from positions 84-90. Variants with randomized positions were subjected to stringent selection in vivo requiring productive interactions with MtDS for survival. Sequence patterns identified in active library members coincide with residue conservation in natural chorismate mutases of the AroQδ subclass to which MtCM belongs. An Arg-Gly dyad at positions 85 and 86, invariant in AroQδ sequences, was intolerant to mutation, whereas Leu88 and Gly89 exhibited a preference for small and hydrophobic residues in functional MtCM-MtDS complexes. In the absence of MtDS, selection under relaxed conditions identifies positions 84-86 as MtCM integrity determinants, suggesting that the more C-terminal residues function in the activation by MtDS. Several MtCM variants, purified using a novel plasmid-based T7 RNA polymerase gene expression system, showed that a diminished ability to physically interact with MtDS correlates with reduced activatability and feedback regulatory control by Tyr and Phe. Mapping critical protein-protein interaction sites by evolutionary strategies may pinpoint promising targets for drugs that interfere with the activity of protein complexes.

Functional Mapping of Protein-Protein Interactions in an Enzyme Complex by Directed Evolution

PubMed Central

Roderer, Kathrin; Neuenschwander, Martin; Codoni, Giosiana; Sasso, Severin; Gamper, Marianne; Kast, Peter

2014-01-01

The shikimate pathway enzyme chorismate mutase converts chorismate into prephenate, a precursor of Tyr and Phe. The intracellular chorismate mutase (MtCM) of Mycobacterium tuberculosis is poorly active on its own, but becomes >100-fold more efficient upon formation of a complex with the first enzyme of the shikimate pathway, 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase (MtDS). The crystal structure of the enzyme complex revealed involvement of C-terminal MtCM residues with the MtDS interface. Here we employed evolutionary strategies to probe the tolerance to substitution of the C-terminal MtCM residues from positions 84–90. Variants with randomized positions were subjected to stringent selection in vivo requiring productive interactions with MtDS for survival. Sequence patterns identified in active library members coincide with residue conservation in natural chorismate mutases of the AroQδ subclass to which MtCM belongs. An Arg-Gly dyad at positions 85 and 86, invariant in AroQδ sequences, was intolerant to mutation, whereas Leu88 and Gly89 exhibited a preference for small and hydrophobic residues in functional MtCM-MtDS complexes. In the absence of MtDS, selection under relaxed conditions identifies positions 84–86 as MtCM integrity determinants, suggesting that the more C-terminal residues function in the activation by MtDS. Several MtCM variants, purified using a novel plasmid-based T7 RNA polymerase gene expression system, showed that a diminished ability to physically interact with MtDS correlates with reduced activatability and feedback regulatory control by Tyr and Phe. Mapping critical protein-protein interaction sites by evolutionary strategies may pinpoint promising targets for drugs that interfere with the activity of protein complexes. PMID:25551646

Rhenium and technetium tricarbonyl, {M(CO)3} (+) (M = Tc, Re), binding to mammalian metallothioneins: new insights into chemical and radiopharmaceutical implications.

PubMed

Lecina, Joan; Palacios, Òscar; Atrian, Sílvia; Capdevila, Mercè; Suades, Joan

2015-04-01

This paper deals with the binding of the four mammalian metallothioneins (MTs) to the organometallic metal fragment {fac-M(CO)3}(+) (M = (99)Tc, Re), which is highly promising for the preparation of second-generation radiopharmaceuticals. The study of the transmetallation reaction between zinc and rhenium in Zn7-MT1 by means of UV-vis and CD spectroscopy demonstrated the incorporation of the {fac-Re(CO)3}(+) fragment to the MTs. This reaction should be performed at 70 °C to accelerate the reaction rate, a result that is consistent with the reported reactivity of the rhenium fragment. ESI-TOF MS demonstrated the formation of mixed-metal species as Zn6,{Re(CO)3}-MT, Zn6,{Re(CO)3}2-MT, and Zn5,{Re(CO)3}3-MT, as well as the different reactivity of the four MT isoforms. Hence, Zn-MT3 showed the highest reactivity, in agreement with its high Cu-thionein character, whereas Zn-MT2 exhibited the lowest reactivity, in line with its high Zn-thionein character. The reactivity of the Zn-loaded forms of MT1 and MT4 is intermediate between those of MT3 and MT2. The study of the binding of the {fac-(99)Tc(CO)3}(+) fragment to MTs showed a significant and very interesting different reactivity in relation to rhenium. The transmetallation reaction is much more effective with technetium than with rhenium and significant amounts of mixed Zn x ,{(99)Tc(CO)3} y -MT species were formed with the four MT isoforms whereas only MT3 rendered similar amounts of rhenium derivatives. The results obtained in this study support the possible use of technetium for labelling mammalian metallothioneins and also for possible radiopharmaceutical applications.

Seminar on Soviet Military Manpower: A Focus on the Soviet Military District, held at the University of Edinburgh, Edinburgh, Scotland, 5-7 April 1978.

DTIC Science & Technology

1978-01-01

irrational uses of labor inputs, improvement of training and skills of cadres, and providing more amenitiesi 6 the Siberian and Far Eastern regions of the... Siberian Military Districts, geography and nature impel the local military authorities to devote much manpower for provision of essential food supplies...awarded to the Belorussian, Kiev, Odessa, North Caucasus and Turkestan Military Districts in 1968; to the Baltic, Carpathian, Volga, Urals, Siberian

Russian Stance in the Caucasus and the National Security Strategy of Georgia

DTIC Science & Technology

2005-06-01

12, 2005) 10 Marcel de Haas, “The Development of Russia’s Security Policy, 1992-2002,” in: Russian Military Reform 1992-2002, ed. Anne C. Aldis...positive tendencies in the world.14 12Marcel de Haas, “The Development of Russia’s Security Policy, 1992-2002,” in: Russian Military Reform 1992...Development of Russia’s Security Policy, 1992-2002,” in: Russian Military Reform 1992-2002, ed. Anne C. Aldis, Roger N. McDermott, 13- 18 (London, Portland

Russian-Soviet Unconventional Wars in the Caucasus, Central Asia, and Afghanistan (Leavenworth Papers, Number 20)

DTIC Science & Technology

1993-04-01

offers important new perspectives on elements of continuity and change in combat over two centuries. This is the first study to provide an in-depth...examination of the evolution of the Russian and Soviet unconventional experience on the predominantly Muslim southern periphery of the former empire. There...include not only adjustment to the tactics of an unfamiliar enemy but the adaptation of one·s own tactics and equipment to constraints imposed on

Understanding the Islamic Movement of Uzbekistan Through Social Movement Theory, and Analyzing and Evaluating Its Potential Threat to Kazakhstan

DTIC Science & Technology

2014-12-01

ORGANIZATION REPORT NUMBER 9. SPONSORING /MONITORING AGENCY NAME(S) AND ADDRESS(ES) N /A 10. SPONSORING/MONITORING AGENCY REPORT NUMBER...Insurgency, 1930‒1970 (Chicago: University of Chicago Press, 1982), 18. 36 Doug McAdam, John D. McCarthy, and Mayer N . Zald, Comparative Perspectives on...Portrait,” Central Asia and the Caucasus, http://cyberleninka.ru/article/ n /the-islamic-movement-of-uzbekistan-lines-to- complete-the-portrait. 27

Computational Astrophysics Towards Exascale Computing and Big Data

NASA Astrophysics Data System (ADS)

Astsatryan, H. V.; Knyazyan, A. V.; Mickaelian, A. M.

2016-06-01

Traditionally, Armenia has a leading position both within the computer science and Information Technology and Astronomy and Astrophysics sectors in the South Caucasus region and beyond. For instance recent years Information Technology (IT) became one of the fastest growing industries of the Armenian economy (EIF 2013). The main objective of this article is to highlight the key activities that will spur Armenia to strengthen its computational astrophysics capacity thanks to the analysis made of the current trends of e-Infrastructures worldwide.

Atmospheric transparency over Mount Shatdzhatmaz in the optical and near-infrared ranges

NASA Astrophysics Data System (ADS)

Voziakova, O. V.

2012-04-01

We present the results of a three-year-long monitoring of atmospheric extinction over Mount Shatdzhatmaz (2112 m) in Northern Caucasus in a photometric band with λ eff = 480 nm and the results of measurements of precipitable water vapor ( PWV), which characterizes the atmospheric transparency in the near infrared. The yearly mean fraction of photometric weather is estimated to be 50% of the clear night time. The yearly median extinction is 0ṃ21; themedian PWV on clear nights is 7.7 mm.

Russia’s Counterinsurgency in North Caucasus: Performance and Consequences

DTIC Science & Technology

2014-03-01

Russian Language Fluency), available from www.perepis2002.ru/ ct/doc/TOM_04_03.xls. 51. V. Zaytsev, “Nayomniki v Chechne ” (“Mercenaries in Chechnya...Taking: How It Was in the World”), Izvestiya, October 24, 2002, available from izvestia.ru/news/268869. 66. “Snayperskaya voyna v Chechne ” (“Sniper War...Alexei Malashenko and Dmitri Trenin, “Vremya yuga. Rossiya v Chechne , Chechnya v Rossii” (“The Time of the South: Russia in Chechnya and Chechnya in

Fifty Years of Soviet and Russian Drilling Activity in Polar and Non-Polar Ice: A Chronological History

DTIC Science & Technology

2007-10-01

max 175 m) Thermo-electric point “Elektroigla ETI-1” Sukhanov et al., 1974 113 Thermal drill LKTBM-1 1973 50.7 Thermal Coring drill...Glacier (West Caucasus), #C3 IGAS, Moscow State University 20 m (?) Thermo-electric point Sukhanov et al., 1974 1970, 1971 Five holes with...total depth of 405 m (max 111 m) Thermo-electric point Elektroigla ETI-1 Sukhanov , 1973; Sukhanov et al., 1974 1972 A few holes with total

The Metallothionein-Null Phenotype Is Associated with Heightened Sensitivity to Lead Toxicity and an Inability to Form Inclusion Bodies

PubMed Central

Qu, Wei; Diwan, Bhalchandra A.; Liu, Jie; Goyer, Robert A.; Dawson, Tammy; Horton, John L.; Cherian, M. George; Waalkes, Michael P.

2002-01-01

Susceptibility to lead toxicity in MT-null mice and cells, lacking the major forms of the metallothionein (MT) gene, was compared to wild-type (WT) mice or cells. Male MT-null and WT mice received lead in the drinking water (0 to 4000 ppm) for 10 to 20 weeks. Lead did not alter body weight in any group. Unlike WT mice, lead-treated MT-null mice showed dose-related nephromegaly. In addition, after lead exposure renal function was significantly diminished in MT-null mice in comparison to WT mice. MT-null mice accumulated less renal lead than WT mice and did not form lead inclusion bodies, which were present in the kidneys of WT mice. In gene array analysis, renal glutathione S-transferases were up-regulated after lead in MT-null mice only. In vitro studies on fibroblast cell lines derived from MT-null and WT mice showed that MT-null cells were much more sensitive to lead cytotoxicity. MT-null cells accumulated less lead and formed no inclusion bodies. The MT-null phenotype seems to preclude lead-induced inclusion body formation and increases lead toxicity at the organ and cellular level despite reducing lead accumulation. This study reveals important roles for MT in chronic lead toxicity, lead accumulation, and inclusion body formation. PMID:11891201

Mitotic Kinesin CENP-E Promotes Microtubule Plus-End Elongation

PubMed Central

Sardar, Harjinder S.; Luczak, Vincent G.; Lopez, Maria M.; Lister, Bradford C.; Gilbert, Susan P.

2010-01-01

Summary Centromere protein CENP-E is a dimeric kinesin (Kinesin-7 family) with critical roles in mitosis including establishment of microtubule (MT)-chromosome linkage and movement of monooriented chromosomes on kinetochore microtubules (kMTs) for proper alignment at metaphase [1-9]. We performed studies to test the hypothesis that CENP-E promotes MT elongation at the MT plus-ends. A human CENP-E construct was engineered, expressed, and purified which yielded the CENP-E-6His dimeric motor protein. The results show that CENP-E promotes MT plus-end directed MT gliding at 11 nm/s. The results from real-time microscopy assays indicate that 60.3% of polarity marked MTs exhibited CENP-E promoted MT plus-end elongation. The MT extension required ATP turnover, and MT plus-end elongation occurred at 1.48 μm/30 min. Immunolocalization studies revealed that 80.8% of plus-end elongated MTs showed CENP-E at the MT plus-end. The time dependence of CENP-E promoted MT elongation in solution best fit a single exponential function (kobs = 5.1 s−1), which is indicative of a mechanism in which α,β-tubulin subunit addition is tightly coupled to ATP turnover. Based on these results, we propose that CENP-E as part of its function in chromosome kinetochore-MT linkage plays a direct role in MT elongation. PMID:20797864

MT2-MMP-dependent release of collagen IV NC1 domains regulates submandibular gland branching morphogenesis.

PubMed

Rebustini, Ivan T; Myers, Christopher; Lassiter, Keyonica S; Surmak, Andrew; Szabova, Ludmila; Holmbeck, Kenn; Pedchenko, Vadim; Hudson, Billy G; Hoffman, Matthew P

2009-10-01

Proteolysis is essential during branching morphogenesis, but the roles of MT-MMPs and their proteolytic products are not clearly understood. Here, we discover that decreasing MT-MMP activity during submandibular gland branching morphogenesis decreases proliferation and increases collagen IV and MT-MMP expression. Specifically, reducing epithelial MT2-MMP profoundly decreases proliferation and morphogenesis, increases Col4a2 and intracellular accumulation of collagen IV, and decreases the proteolytic release of collagen IV NC1 domains. Importantly, we demonstrate the presence of collagen IV NC1 domains in developing tissue. Furthermore, recombinant collagen IV NC1 domains rescue branching morphogenesis after MT2-siRNA treatment, increasing MT-MMP and proproliferative gene expression via beta1 integrin and PI3K-AKT signaling. Additionally, HBEGF also rescues MT2-siRNA treatment, increasing NC1 domain release, proliferation, and MT2-MMP and Hbegf expression. Our studies provide mechanistic insight into how MT2-MMP-dependent release of bioactive NC1 domains from collagen IV is critical for integrating collagen IV synthesis and proteolysis with epithelial proliferation during branching morphogenesis.

More evidence for non-maternal inheritance of mitochondrial DNA?

PubMed

Bandelt, H-J; Kong, Q-P; Parson, W; Salas, A

2005-12-01

A single case of paternal co-transmission of mitochondrial DNA (mtDNA) in humans has been reported so far. To find potential instances of non-maternal inheritance of mtDNA. Published medical case studies (of single patients) were searched for irregular mtDNA patterns by comparing the given haplotype information for different clones or tissues with the worldwide mtDNA database as known to date-a method that has proved robust and reliable for the detection of flawed mtDNA sequence data. More than 20 studies were found reporting clear cut instances with mtDNAs of different ancestries in single individuals. As examples, cases are reviewed from recent published reports which, at face value, may be taken as evidence for paternal inheritance of mtDNA or recombination. Multiple types (or recombinant types) of quite dissimilar mitochondrial DNA from different parts of the known mtDNA phylogeny are often reported in single individuals. From re-analyses and corrigenda of forensic mtDNA data, it is apparent that the phenomenon of mixed or mosaic mtDNA can be ascribed solely to contamination and sample mix up.

Stochastic modelling, Bayesian inference, and new in vivo measurements elucidate the debated mtDNA bottleneck mechanism

PubMed Central

Johnston, Iain G; Burgstaller, Joerg P; Havlicek, Vitezslav; Kolbe, Thomas; Rülicke, Thomas; Brem, Gottfried; Poulton, Jo; Jones, Nick S

2015-01-01

Dangerous damage to mitochondrial DNA (mtDNA) can be ameliorated during mammalian development through a highly debated mechanism called the mtDNA bottleneck. Uncertainty surrounding this process limits our ability to address inherited mtDNA diseases. We produce a new, physically motivated, generalisable theoretical model for mtDNA populations during development, allowing the first statistical comparison of proposed bottleneck mechanisms. Using approximate Bayesian computation and mouse data, we find most statistical support for a combination of binomial partitioning of mtDNAs at cell divisions and random mtDNA turnover, meaning that the debated exact magnitude of mtDNA copy number depletion is flexible. New experimental measurements from a wild-derived mtDNA pairing in mice confirm the theoretical predictions of this model. We analytically solve a mathematical description of this mechanism, computing probabilities of mtDNA disease onset, efficacy of clinical sampling strategies, and effects of potential dynamic interventions, thus developing a quantitative and experimentally-supported stochastic theory of the bottleneck. DOI: http://dx.doi.org/10.7554/eLife.07464.001 PMID:26035426

Widespread recombination in published animal mtDNA sequences.

PubMed

Tsaousis, A D; Martin, D P; Ladoukakis, E D; Posada, D; Zouros, E

2005-04-01

Mitochondrial DNA (mtDNA) recombination has been observed in several animal species, but there are doubts as to whether it is common or only occurs under special circumstances. Animal mtDNA sequences retrieved from public databases were unambiguously aligned and rigorously tested for evidence of recombination. At least 30 recombination events were detected among 186 alignments examined. Recombinant sequences were found in invertebrates and vertebrates, including primates. It appears that mtDNA recombination may occur regularly in the animal cell but rarely produces new haplotypes because of homoplasmy. Common animal mtDNA recombination would necessitate a reexamination of phylogenetic and biohistorical inference based on the assumption of clonal mtDNA transmission. Recombination may also have an important role in producing and purging mtDNA mutations and thus in mtDNA-based diseases and senescence.

Minds “At Attention”: Mindfulness Training Curbs Attentional Lapses in Military Cohorts

PubMed Central

Jha, Amishi P.; Morrison, Alexandra B.; Dainer-Best, Justin; Parker, Suzanne; Rostrup, Nina; Stanley, Elizabeth A.

2015-01-01

We investigated the impact of mindfulness training (MT) on attentional performance lapses associated with task-unrelated thought (i.e., mind wandering). Periods of persistent and intensive demands may compromise attention and increase off-task thinking. Here, we investigated if MT may mitigate these deleterious effects and promote cognitive resilience in military cohorts enduring a high-demand interval of predeployment training. To better understand which aspects of MT programs are most beneficial, three military cohorts were examined. Two of the three groups were provided MT. One group received an 8-hour, 8-week variant of Mindfulness-based Mind Fitness Training (MMFT) emphasizing engagement in training exercises (training-focused MT, n = 40), a second group received a didactic-focused variant emphasizing content regarding stress and resilience (didactic-focused MT, n = 40), and the third group served as a no-training control (NTC, n = 24). Sustained Attention to Response Task (SART) performance was indexed in all military groups and a no-training civilian group (CIV, n = 45) before (T1) and after (T2) the MT course period. Attentional performance (measured by A’, a sensitivity index) was lower in NTC vs. CIV at T2, suggesting that performance suffers after enduring a high-demand predeployment interval relative to a similar time period of civilian life. Yet, there were significantly fewer performance lapses in the military cohorts receiving MT relative to NTC, with training-focused MT outperforming didactic-focused MT at T2. From T1 to T2, A’ degraded in NTC and didactic-focused MT but remained stable in training-focused MT and CIV. In sum, while protracted periods of high-demand military training may increase attentional performance lapses, practice-focused MT programs akin to training-focused MT may bolster attentional performance more than didactic-focused programs. As such, training-focused MT programs should be further examined in cohorts experiencing protracted high-demand intervals. PMID:25671579

MT-4 suppresses resistant ovarian cancer growth through targeting tubulin and HSP27.

PubMed

Pai, Hui Chen; Kumar, Sunil; Shen, Chien-Chang; Liou, Jing Ping; Pan, Shiow Lin; Teng, Che Ming

2015-01-01

In this study, the anticancer mechanisms of MT-4 were examined in A2780 and multidrug-resistant NCI-ADR/res human ovarian cancer cell lines. To evaluate the activity of MT-4, we performed in vitro cell viability and cell cycle assays and in vivo xenograft assays. Immunoblotting analysis was carried out to evaluate the effect of MT-4 on ovarian cancer. Tubulin polymerization was determined using a tubulin binding assay. MT-4 (2-Methoxy-5-[2-(3,4,5-trimethoxy-phenyl)-ethyl]-phenol), a derivative of moscatilin, can inhibit both sensitive A2780 and multidrug-resistant NCI-ADR/res cell growth and viability. MT-4 inhibited tubulin polymerization to induce G2/M arrest followed by caspase-mediated apoptosis. Further studies indicated that MT-4 is not a substrate of P-glycoprotein (p-gp). MT-4 also caused G2/M cell cycle arrest, accompanied by the upregulation of cyclin B, p-Thr161 Cdc2/p34, polo-like kinase 1 (PLK1), Aurora kinase B, and phospho-Ser10-histone H3 protein levels. In addition, we found that p38 MAPK pathway activation was involved in MT-4-induced apoptosis. Most importantly, MT-4 also decreased heat shock protein 27 expression and reduced its interaction with caspase-3, which inured cancer cells to chemotherapy resistance. Treatment of cells with SB203580 or overexpression of dominant negative (DN)-p38 or wild-type HSP27 reduced PARP cleavage caused by MT-4. MT-4 induced apoptosis through regulation of p38 and HSP27. Our xenograft models also show the in vivo efficacy of MT-4. MT-4 inhibited both A2780 and NCI-ADR/res cell growth in vitro and in vivo. These findings indicate that MT-4 could be a potential lead compound for the treatment of multidrug-resistant ovarian cancer.

Minds "at attention": mindfulness training curbs attentional lapses in military cohorts.

PubMed

Jha, Amishi P; Morrison, Alexandra B; Dainer-Best, Justin; Parker, Suzanne; Rostrup, Nina; Stanley, Elizabeth A

2015-01-01

We investigated the impact of mindfulness training (MT) on attentional performance lapses associated with task-unrelated thought (i.e., mind wandering). Periods of persistent and intensive demands may compromise attention and increase off-task thinking. Here, we investigated if MT may mitigate these deleterious effects and promote cognitive resilience in military cohorts enduring a high-demand interval of predeployment training. To better understand which aspects of MT programs are most beneficial, three military cohorts were examined. Two of the three groups were provided MT. One group received an 8-hour, 8-week variant of Mindfulness-based Mind Fitness Training (MMFT) emphasizing engagement in training exercises (training-focused MT, n = 40), a second group received a didactic-focused variant emphasizing content regarding stress and resilience (didactic-focused MT, n = 40), and the third group served as a no-training control (NTC, n = 24). Sustained Attention to Response Task (SART) performance was indexed in all military groups and a no-training civilian group (CIV, n = 45) before (T1) and after (T2) the MT course period. Attentional performance (measured by A', a sensitivity index) was lower in NTC vs. CIV at T2, suggesting that performance suffers after enduring a high-demand predeployment interval relative to a similar time period of civilian life. Yet, there were significantly fewer performance lapses in the military cohorts receiving MT relative to NTC, with training-focused MT outperforming didactic-focused MT at T2. From T1 to T2, A' degraded in NTC and didactic-focused MT but remained stable in training-focused MT and CIV. In sum, while protracted periods of high-demand military training may increase attentional performance lapses, practice-focused MT programs akin to training-focused MT may bolster attentional performance more than didactic-focused programs. As such, training-focused MT programs should be further examined in cohorts experiencing protracted high-demand intervals.

The Strictly Aerobic Yeast Yarrowia lipolytica Tolerates Loss of a Mitochondrial DNA-Packaging Protein

PubMed Central

Bakkaiova, Jana; Arata, Kosuke; Matsunobu, Miki; Ono, Bungo; Aoki, Tomoyo; Lajdova, Dana; Nebohacova, Martina; Nosek, Jozef; Miyakawa, Isamu

2014-01-01

Mitochondrial DNA (mtDNA) is highly compacted into DNA-protein structures termed mitochondrial nucleoids (mt-nucleoids). The key mt-nucleoid components responsible for mtDNA condensation are HMG box-containing proteins such as mammalian mitochondrial transcription factor A (TFAM) and Abf2p of the yeast Saccharomyces cerevisiae. To gain insight into the function and organization of mt-nucleoids in strictly aerobic organisms, we initiated studies of these DNA-protein structures in Yarrowia lipolytica. We identified a principal component of mt-nucleoids in this yeast and termed it YlMhb1p (Y. lipolytica mitochondrial HMG box-containing protein 1). YlMhb1p contains two putative HMG boxes contributing both to DNA binding and to its ability to compact mtDNA in vitro. Phenotypic analysis of a Δmhb1 strain lacking YlMhb1p resulted in three interesting findings. First, although the mutant exhibits clear differences in mt-nucleoids accompanied by a large decrease in the mtDNA copy number and the number of mtDNA-derived transcripts, its respiratory characteristics and growth under most of the conditions tested are indistinguishable from those of the wild-type strain. Second, our results indicate that a potential imbalance between subunits of the respiratory chain encoded separately by nuclear DNA and mtDNA is prevented at a (post)translational level. Third, we found that mtDNA in the Δmhb1 strain is more prone to mutations, indicating that mtHMG box-containing proteins protect the mitochondrial genome against mutagenic events. PMID:24972935

Fibromyalgia--a syndrome associated with decreased nocturnal melatonin secretion.

PubMed

Wikner, J; Hirsch, U; Wetterberg, L; Röjdmark, S

1998-08-01

Most patients with fibromyalgic syndrome (FMS) complain of sleep disturbances, fatigue, and pain. These symptoms might be a consequence of changed melatonin (MT) secretion, since MT is known to have sleep promoting properties. Moreover, serum concentrations of two MT precursors (tryptophan and serotonin)--affecting both sleep and pain perception--appear to be low in patients with FMS. Therefore, the objective of this investigation was to study whether serum MT (s-MT) level is also low in these patients. Eight patients with FMS and 8 healthy sex-, BMI-, and age-matched controls were included in the study. s-MT concentrations were determined every second hour between 1800 and 0800 h. Urine was collected between 2200 and 0700 h for determination of urinary MT excretion. To evaluate total MT secretion between 1800 and 0800 h and MT secretion during the hours of darkness (between 23 and 07 h) individual MT areas under the curve (AUC) were calculated and expressed as group means. The FMS patients had a 31% lower MT secretion than healthy subjects during the hours of darkness (MT AUC 2300-0700 h (mean +/- SEM): 1.70 +/- 0.17 vs 2.48 +/- 0.38 nmol/l; P < 0.05). Also the s-MT peak value was significantly lower in the patient group: 0.28 +/- 0.03 vs 0.44 +/- 0.06 nmol/l; P < 0.05). Patients with fibromyalgic syndrome have a lower melatonin secretion during the hours of darkness than healthy subjects. This may contribute to impaired sleep at night, fatigue during the day, and changed pain perception.

Evidence of animal mtDNA recombination between divergent populations of the potato cyst nematode Globodera pallida.

PubMed

Hoolahan, Angelique H; Blok, Vivian C; Gibson, Tracey; Dowton, Mark

2012-03-01

Recombination is typically assumed to be absent in animal mitochondrial genomes (mtDNA). However, the maternal mode of inheritance means that recombinant products are indistinguishable from their progenitor molecules. The majority of studies of mtDNA recombination assess past recombination events, where patterns of recombination are inferred by comparing the mtDNA of different individuals. Few studies assess contemporary mtDNA recombination, where recombinant molecules are observed as direct mosaics of known progenitor molecules. Here we use the potato cyst nematode, Globodera pallida, to investigate past and contemporary recombination. Past recombination was assessed within and between populations of G. pallida, and contemporary recombination was assessed in the progeny of experimental crosses of these populations. Breeding of genetically divergent organisms may cause paternal mtDNA leakage, resulting in heteroplasmy and facilitating the detection of recombination. To assess contemporary recombination we looked for evidence of recombination between the mtDNA of the parental populations within the mtDNA of progeny. Past recombination was detected between a South American population and several UK populations of G. pallida, as well as between two South American populations. This suggests that these populations may have interbred, paternal mtDNA leakage occurred, and the mtDNA of these populations subsequently recombined. This evidence challenges two dogmas of animal mtDNA evolution; no recombination and maternal inheritance. No contemporary recombination between the parental populations was detected in the progeny of the experimental crosses. This supports current arguments that mtDNA recombination events are rare. More sensitive detection methods may be required to adequately assess contemporary mtDNA recombination in animals.

Mitochondrial tRNA cleavage by tRNA-targeting ribonuclease causes mitochondrial dysfunction observed in mitochondrial disease

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ogawa, Tetsuhiro, E-mail: atetsu@mail.ecc.u-tokyo.ac.jp; Shimizu, Ayano; Takahashi, Kazutoshi

2014-08-15

Highlights: • MTS-tagged ribonuclease was translocated successfully to the mitochondrial matrix. • MTS-tagged ribonuclease cleaved mt tRNA and reduced COX activity. • Easy and reproducible method of inducing mt tRNA dysfunction. - Abstract: Mitochondrial DNA (mtDNA) is a genome possessed by mitochondria. Since reactive oxygen species (ROS) are generated during aerobic respiration in mitochondria, mtDNA is commonly exposed to the risk of DNA damage. Mitochondrial disease is caused by mitochondrial dysfunction, and mutations or deletions on mitochondrial tRNA (mt tRNA) genes are often observed in mtDNA of patients with the disease. Hence, the correlation between mt tRNA activity and mitochondrialmore » dysfunction has been assessed. Then, cybrid cells, which are constructed by the fusion of an enucleated cell harboring altered mtDNA with a ρ{sup 0} cell, have long been used for the analysis due to difficulty in mtDNA manipulation. Here, we propose a new method that involves mt tRNA cleavage by a bacterial tRNA-specific ribonuclease. The ribonuclease tagged with a mitochondrial-targeting sequence (MTS) was successfully translocated to the mitochondrial matrix. Additionally, mt tRNA cleavage, which resulted in the decrease of cytochrome c oxidase (COX) activity, was observed.« less

Metallothionein expression in canine and feline mammary and melanotic tumours.

PubMed

Dincer, Z; Jasani, B; Haywood, S; Mullins, J E; Fuentealba, I C

2001-01-01

Moderate to strong immunohistochemical metallothionein (MT) positivity (MT expression) is associated with a poor prognosis in some human tumours. The aim of this study was to determine MT expression in mammary tumours and cutaneous melanomas in dogs and cats. Canine (67) and feline (47) mammary tumours, and cutaneous melanomas (canine 40, feline 26) were immunolabelled with MT monoclonal antibody E9. The overall incidence of MT expression of these tumours was similar to that observed in various human neoplasms. However, a striking interspecies difference was detected. In dogs, MT expression occurred in 100% of benign and 57% of malignant mammary tumours. In cats, however, 30% of malignant mammary tumours expressed MT but benign mammary tumours and cases of fibroadenomatous hyperplasia did not. Moderate to strong MT immunoreactivity was detected in 30% of benign and 25% of malignant cutaneous melanomas in dogs, and in 6% of malignant melanomas in cats. The findings in feline mammary tumours resembled findings reported in human breast cancer, but the cause of tumour-associated MT expression is unknown. Studies are in progress to determine whether the MT state (apo [metal-free] or holo [metal-bound]) accounts for the paradoxical association of MT expression with individual types of tumours and the animal species in which they arise. Copyright Harcourt Publishers Ltd.

Mitochondrial genome-maintaining activity of mouse mitochondrial transcription factor A and its transcript isoform in Saccharomyces cerevisiae.

PubMed

Yoon, Young Geol; Koob, Michael D; Yoo, Young Hyun

2011-09-15

Mitochondrial transcription factor A (Tfam) binds to and organizes mitochondrial DNA (mtDNA) genome into a mitochondrial nucleoid (mt-nucleoid) structure, which is necessary for mtDNA transcription and maintenance. Here, we demonstrate the mtDNA-organizing activity of mouse Tfam and its transcript isoform (Tfam(iso)), which has a smaller high-mobility group (HMG)-box1 domain, using a yeast model system that contains a deletion of the yeast homolog of mouse Tfam protein, Abf2p. When the mouse Tfam genes were introduced into the ABF2 locus of yeast genome, the corresponding mouse proteins, Tfam and Tfam(iso), can functionally replace the yeast Abf2p and support mtDNA maintenance and mitochondrial biogenesis in yeast. Growth properties, mtDNA content and mitochondrial protein levels of genes encoded in the mtDNA were comparable in the strains expressing mouse proteins and the wild-type yeast strain, indicating that the proteins have robust mtDNA-maintaining and -expressing function in yeast mitochondria. These results imply that the mtDNA-organizing activities of the mouse mt-nucleoid proteins are structurally and evolutionary conserved, thus they can maintain the mtDNA of distantly related and distinctively different species, such as yeast. Copyright © 2011 Elsevier B.V. All rights reserved.

Mitochondrial DNA heteroplasmy in Candida glabrata after mitochondrial transformation.

PubMed

Zhou, Jingwen; Liu, Liming; Chen, Jian

2010-05-01

Genetic manipulation of mitochondrial DNA (mtDNA) is the most direct method for investigating mtDNA, but until now, this has been achieved only in the diploid yeast Saccharomyces cerevisiae. In this study, the ATP6 gene on mtDNA of the haploid yeast Candida glabrata (Torulopsis glabrata) was deleted by biolistic transformation of DNA fragments with a recoded ARG8(m) mitochondrial genetic marker, flanked by homologous arms to the ATP6 gene. Transformants were identified by arginine prototrophy. However, in the transformants, the original mtDNA was not lost spontaneously, even under arginine selective pressure. Moreover, the mtDNA transformants selectively lost the transformed mtDNA under aerobic conditions. The mtDNA heteroplasmy in the transformants was characterized by PCR, quantitative PCR, and Southern blotting, showing that the heteroplasmy was relatively stable in the absence of arginine. Aerobic conditions facilitated the loss of the original mtDNA, and anaerobic conditions favored loss of the transformed mtDNA. Moreover, detailed investigations showed that increases in reactive oxygen species in mitochondria lacking ATP6, along with their equal cell division, played important roles in determining the dynamics of heteroplasmy. Based on our analysis of mtDNA heteroplasmy in C. glabrata, we were able to generate homoplasmic Deltaatp6 mtDNA strains.

Presequence-Independent Mitochondrial Import of DNA Ligase Facilitates Establishment of Cell Lines with Reduced mtDNA Copy Number

PubMed Central

Spadafora, Domenico; Kozhukhar, Natalia; Alexeyev, Mikhail F.

2016-01-01

Due to the essential role played by mitochondrial DNA (mtDNA) in cellular physiology and bioenergetics, methods for establishing cell lines with altered mtDNA content are of considerable interest. Here, we report evidence for the existence in mammalian cells of a novel, low- efficiency, presequence-independent pathway for mitochondrial protein import, which facilitates mitochondrial uptake of such proteins as Chlorella virus ligase (ChVlig) and Escherichia coli LigA. Mouse cells engineered to depend on this pathway for mitochondrial import of the LigA protein for mtDNA maintenance had severely (up to >90%) reduced mtDNA content. These observations were used to establish a method for the generation of mouse cell lines with reduced mtDNA copy number by, first, transducing them with a retrovirus encoding LigA, and then inactivating in these transductants endogenous Lig3 with CRISPR-Cas9. Interestingly, mtDNA depletion to an average level of one copy per cell proceeds faster in cells engineered to maintain mtDNA at low copy number. This makes a low-mtDNA copy number phenotype resulting from dependence on mitochondrial import of DNA ligase through presequence-independent pathway potentially useful for rapidly shifting mtDNA heteroplasmy through partial mtDNA depletion. PMID:27031233

Subsurface Structure Interpretation Beneath of Mt. Pandan Based on Gravity Data

NASA Astrophysics Data System (ADS)

Santoso, D.; Wahyudi, E. J.; Alawiyah, S.; Nugraha, A. D.; Widiyantoro, S.; Kadir, W. G. A.; Supendi, P.; Wiyono, S.; Zulkafriza

2017-04-01

Mt. Pandan is one of the volcano that state as dormant volcano. On the other hand, Smyth et al. (2008) defined that Mt. Pandan is an active volcano. This volcano is apart a volcanic chain in Java island which is trending east-west along the island. This volcanic chain known as present day volcanic arc. Mt. Wilis is located in the south and it relatively much bigger compare to Mt. Pandan. There were earthquakes activity experienced in the surrounding Mt. Pandan area in the past several years. This event is interesting, because Mt. Pandan is not classify as the active volcano according to the list of volcanoes in Indonesia. On the otherhand Smyth et. al. (2008) mentioned that G. Pandan as modern volcanic which is located in Kendeng Zone of East Java. Gravity measurement around Mt. Pandan area was done in order to understand subsurface structure of Mt. Pandan. Gravity interpretation results shows that there is a low density structure beneath Mt. Pandan. It could be interpreted as existing of magma body below the surface. Some indication of submagmatic activities were found as hot spring and warm ground. Therefore it could be concluded that there is a possibility of magmatic activity below the Mt. Pandan.

Nose-to-brain transport of melatonin from polymer gel suspensions: a microdialysis study in rats.

PubMed

Jayachandra Babu, R; Dayal, Pankaj Patrick; Pawar, Kasturi; Singh, Mandip

2011-11-01

Exogenous melatonin (MT) has significant neuroprotective roles in Alzheimer's and Parkinson's diseases. This study investigates the delivery MT to brain via nasal route as a polymeric gel suspension using central brain microdialysis in anesthetized rats. Micronized MT suspensions using polymers [carbopol, carboxymethyl cellulose (CMC)] and polyethylene glycol 400 (PEG400) were prepared and characterized for nasal administration. In vitro permeation of the formulations was measured across a three-dimensional tissue culture model EpiAirway(™). The central brain delivery into olfactory bulb of nasally administered MT gel suspensions was studied using brain microdialysis in male Wistar rats. The MT content of microdialysis samples was analyzed by high performance liquid chromatography (HPLC) using electrochemical detection. The nose-to-brain delivery of MT formulations was compared with intravenously administered MT solution. MT suspensions in carbopol and CMC vehicles have shown significantly higher permeability across Epiairway(™) as compared to control, PEG400 (P < 0.05). The brain (olfactory bulb) levels of MT after intranasal administration were 9.22, 6.77 and 4.04-fold higher for carbopol, CMC and PEG400, respectively, than that of intravenous MT in rats. In conclusion, microdialysis studies demonstrated increased brain levels of MT via nasal administration in rats.

Nose-to-brain transport of melatonin from polymer gel suspensions: a microdialysis study in rats

PubMed Central

Babu, R. Jayachandra; Dayal, Pankaj Patrick; Pawar, Kasturi; Singh, Mandip

2012-01-01

Purpose Exogenous melatonin (MT) has significant neuroprotective roles in Alzheimer’s and Parkinson’s diseases. This study investigates the delivery MT to brain via nasal route as a polymeric gel suspension using central brain microdialysis in anesthetized rats. Methods Micronized MT suspensions using polymers [carbopol, carboxymethyl cellulose (CMC)] and polyethylene glycol 400 (PEG400) were prepared and characterized for nasal administration. In vitro permeation of the formulations was measured across a three-dimensional tissue culture model EpiAirway™. The central brain delivery into olfactory bulb of nasally administered MT gel suspensions was studied using brain microdialysis in male Wistar rats. The MT content of microdialysis samples was analyzed by high performance liquid chromatography (HPLC) using electrochemical detection. The nose-to-brain delivery of MT formulations was compared with intravenously administered MT solution. Results MT suspensions in carbopol and CMC vehicles have shown significantly higher permeability across Epiairway™ as compared to control, PEG400 (P < 0.05). The brain (olfactory bulb) levels of MT after intranasal administration were 9.22, 6.77 and 4.04-fold higher for carbopol, CMC and PEG400, respectively, than that of intravenous MT in rats. In conclusion, microdialysis studies demonstrated increased brain levels of MT via nasal administration in rats. PMID:21428693

Cytoplasmic Nucleation and Atypical Branching Nucleation Generate Endoplasmic Microtubules in Physcomitrella patens[OPEN

PubMed Central

Nakaoka, Yuki; Kimura, Akatsuki; Tani, Tomomi; Goshima, Gohta

2015-01-01

The mechanism underlying microtubule (MT) generation in plants has been primarily studied using the cortical MT array, in which fixed-angled branching nucleation and katanin-dependent MT severing predominate. However, little is known about MT generation in the endoplasm. Here, we explored the mechanism of endoplasmic MT generation in protonemal cells of Physcomitrella patens. We developed an assay that utilizes flow cell and oblique illumination fluorescence microscopy, which allowed visualization and quantification of individual MT dynamics. MT severing was infrequently observed, and disruption of katanin did not severely affect MT generation. Branching nucleation was observed, but it showed markedly variable branch angles and was occasionally accompanied by the transport of nucleated MTs. Cytoplasmic nucleation at seemingly random locations was most frequently observed and predominated when depolymerized MTs were regrown. The MT nucleator γ-tubulin was detected at the majority of the nucleation sites, at which a single MT was generated in random directions. When γ-tubulin was knocked down, MT generation was significantly delayed in the regrowth assay. However, nucleation occurred at a normal frequency in steady state, suggesting the presence of a γ-tubulin-independent backup mechanism. Thus, endoplasmic MTs in this cell type are generated in a less ordered manner, showing a broader spectrum of nucleation mechanisms in plants. PMID:25616870

The structure of Greater Caucasus in scales of sedimentary cover and crust, based on restored structural sections, which were obtained from study of fold-related strain

NASA Astrophysics Data System (ADS)

Yakovlev, Fedor

2015-04-01

Geological setting. Greater Caucasus (GC) belongs to a linear branch of the Alpine belt (Crimea, Caucasus, Kopet-Dag) which is not arc-like as the Alps. The main stripe of the Alpine deformations in GC occupies space about 1000 x 50 km between the Scythian plate and the Transcaucasian massif. Folded structure prevails and it is accompanied by almost total absence of thrust in a hinterland and by limited thrusts in forelands. The Paleozoic basement outcrops only in a northern half of this linear structure, occupying about 1/8 part of GC. Alpine sedimentary cover (J1 - Pg2) has 10-15 km thickness of flysch-like sequences of sands, argillites, limestones. These sediments formed numerous folds of 0.1 - 1.0 km width. Because each fold has information about strain, the existence of so rich material allows to restore geometry of a sedimentary cover from soil to its top. Method. Three regions were studied due based on 24 detailed structural sections of 510 km total actual length. Two kind of isometric objects of different scale were established: domains and structural cells. There were domains as associations of 2-5 folds; sections were split on 505 one. In these domains, three parameters of morphology were measured as elements of strain ellipsoid (ellipse): dip of axial plain, dip of envelope plain, value of shortening as interlimb angle [1, 2, 3]. It was possible to restore actual state of domain to its pre-folded state (from ellipse to circle) by sequence of three kinematic operations: by rotation to horizontal position of envelope plain, by horizontal simple shear to vertical axial plain and by vertical flattening (pure shear). Pre-folded state of whole section is forming by aggregation of pre-folded states of domains. "Structural cells" were formed by aggregation of 5-10 domains in each cell for correct measuring of shortening value in scale of whole sedimentary cover; there were 78 for three regions. "Stratigraphic models" from bottom to top of cover for each cell were found based on famous (outcropped) column and on some interpolations. It allow to find vertical positions (depth) of section lines inside models. Initial thickness of cover was reformed to new post-folded thickness and knowledge of section line depth allow to find a depth of cover bottom and virtual heigth position of cover top (uplift amplitude). Results. North-Western Caucasus (NWC) was studied on 250x50 km stripe in 11 sections and 42 cells [1]. Initial thickness of sedimentary cover was 13 km (7.3÷17.3 km). Shortening value for structural cells deviated from small (-10%, 2%) at pericline part to 15-67% and it has 35% in average. Actual depth of basement top (soil of sedimentary cover ) was -13 km (-2.2÷-31.7 km). Three sectors along strike of NWC were found: with central depression at pericline (-19, -23 km), with sinking of south part of structure (-27, -32 km) and with central depression again on East (-25 km). Amplitude of erosion has reasonable distribution on NWC: from small in average at pericline (3 km) to high value at center (15 km) with smaller values on edges of sections. Average value was 8.9 km (+0÷+22.2 km). Chiaur tectonic zone in South Ossetia (ChZ) and two zones in South-Eastern Caucasus - Tfan Zone (TZ) and Shakhdag zone (ShZ) have formed together the other part of Caucasus [3]. Initial and actual depths of sedimentary cover have had close values -15 (-21) km, -10 (-10) km, -13 (-12) km. Southern part of structure (ChZ) has had considerable actual subsidence of basement top (-13.6÷-26.3 km). The shortening values were found as 57% in average for ChZ (with deviations 46÷67%), 55% for TZ (36÷67%), 49% for ShZ (37÷62%). Amplitudes of erosion were calculated as 16 km for ChZ (10÷22), 19 km for TZ (12÷24), 10 km for ShZ (7÷12). On the southern border of GC, depths of basement top were found as -8 km for Trans-Caucasian massif (stable block) and -19 km for adjacent cell of ChZ (GC). It means that: 1) value of shortening of sedimentary cover of ChZ 57% is equal to shortening of basement, 2) regional detachment and thrusts in GC above basement cannot exist. Based on these data, calculation of vertical movements of former Moho (-40 km for beginning of J1) shows that actual position of these rocks may has depth about 110 km [3]. It means that considerable part of crust rocks should became "mantle" in density and this kind of rocks transformation is inescapable condition of folding formation for structure of GC. 1. Yakovlev F.L. // Izvestiya, Physics of the Solid Earth. 2009. 45. 11. 1023-1034. 2. Yakovlev F.L. // Comptes Rendus Geoscience. 2012. 344 (3-4). 125-137. 3. Yakovlev F.L. // Bulletin of "KRAESC". Earth Sciences. 2012. 1 (19). 191-214. (in Russian)

Organization and dynamics of yeast mitochondrial nucleoids

PubMed Central

MIYAKAWA, Isamu

2017-01-01

Mitochondrial DNA (mtDNA) is packaged by association with specific proteins in compact DNA-protein complexes named mitochondrial nucleoids (mt-nucleoids). The budding yeast Saccharomyces cerevisiae is able to grow either aerobically or anaerobically. Due to this characteristic, S. cerevisiae has been extensively used as a model organism to study genetics, morphology and biochemistry of mitochondria for a long time. Mitochondria of S. cerevisiae frequently fuse and divide, and perform dynamic morphological changes depending on the culture conditions and the stage of life cycle of the yeast cells. The mt-nucleoids also dynamically change their morphology, accompanying morphological changes of mitochondria. The mt-nucleoids have been isolated morphologically intact and functional analyses of mt-nucleoid proteins have been extensively performed. These studies have revealed that the functions of mt-nucleoid proteins are essential for maintenance of mtDNA. The aims of this review are to summarize the history on the research of yeast mt-nucleoids as well as recent findings on the organization of the mt-nucleoids and mitochondrial dynamics. PMID:28496055

A novel noncovalent complex of chorismate mutase and DAHP synthase from Mycobacterium tuberculosis: protein purification, crystallization and X-ray diffraction analysis

PubMed Central

Ökvist, Mats; Sasso, Severin; Roderer, Kathrin; Kast, Peter; Krengel, Ute

2009-01-01

Chorismate mutase catalyzes a key step in the shikimate-biosynthetic pathway and hence is an essential enzyme in bacteria, plants and fungi. Mycobacterium tuberculosis contains two chorismate mutases, a secreted and an intracellular one, the latter of which (MtCM; Rv0948c; 90 amino-acid residues; 10 kDa) is the subject of this work. Here are reported the gene expression, purification and crystallization of MtCM alone and of its complex with another shikimate-pathway enzyme, DAHP synthase (MtDS; Rv2178c; 472 amino-acid residues; 52 kDa), which has been shown to enhance the catalytic efficiency of MtCM. The MtCM–MtDS complex represents the first noncovalent enzyme complex from the common shikimate pathway to be structurally characterized. Soaking experiments with a transition-state analogue are also reported. The crystals of MtCM and the MtCM–MtDS complex diffracted to 1.6 and 2.1 Å resolution, respectively. PMID:19851019

Steroid androgen 17α-methyltestosterone induces malformations and biochemical alterations in zebrafish embryos.

PubMed

Rivero-Wendt, Carla Letícia Gediel; Oliveira, Rhaul; Monteiro, Marta Sofia; Domingues, Inês; Soares, Amadeu Mortágua Velho Maia; Grisolia, Cesar Koppe

2016-06-01

The synthetic androgen 17α-methyltestosterone is widely used in fish aquaculture for sex reversion of female individuals. Little is known about the amount of MT residues reaching the aquatic environment and further impacts in non-target organisms, including fish early-life stages. Thus, in this work, zebrafish embryos were exposed to two forms of 17α-methyltestosterone: the pure compound (MT) and a formulation commonly used in Brazil (cMT). For MT, a 96h-LC50 of 10.09mg/l was calculated. MT also affected embryo development inducing tail malformations, edemas, abnormal development of the head, and hatching delay. At biochemical level MT inhibited vitellogenin (VTG) and inhibited cholinesterase and lactate dehydrogenase. cMT elicited similar patterns of toxicity as the pure compound (MT). Effects reported in this study suggest a potential environmental risk of MT, especially since the VTG effects occurred at environmental relevant concentrations (0.004mg/l). Copyright © 2016 Elsevier B.V. All rights reserved.

Functions of the high mobility group protein, Abf2p, in mitochondrial DNA segregation, recombination and copy number in Saccharomyces cerevisiae.

PubMed

Zelenaya-Troitskaya, O; Newman, S M; Okamoto, K; Perlman, P S; Butow, R A

1998-04-01

Previous studies have established that the mitochondrial high mobility group (HMG) protein, Abf2p, of Saccharomyces cerevisiae influences the stability of wild-type (rho+) mitochondrial DNA (mtDNA) and plays an important role in mtDNA organization. Here we report new functions for Abf2p in mtDNA transactions. We find that in homozygous deltaabf2 crosses, the pattern of sorting of mtDNA and mitochondrial matrix protein is altered, and mtDNA recombination is suppressed relative to homozygous ABF2 crosses. Although Abf2p is known to be required for the maintenance of mtDNA in rho+ cells growing on rich dextrose medium, we find that it is not required for the maintenance of mtDNA in p cells grown on the same medium. The content of both rho+ and rho- mtDNAs is increased in cells by 50-150% by moderate (two- to threefold) increases in the ABF2 copy number, suggesting that Abf2p plays a role in mtDNA copy control. Overproduction of Abf2p by > or = 10-fold from an ABF2 gene placed under control of the GAL1 promoter, however, leads to a rapid loss of rho+ mtDNA and a quantitative conversion of rho+ cells to petites within two to four generations after a shift of the culture from glucose to galactose medium. Overexpression of Abf2p in rho- cells also leads to a loss of mtDNA, but at a slower rate than was observed for rho+ cells. The mtDNA instability phenotype is related to the DNA-binding properties of Abf2p because a mutant Abf2p that contains mutations in residues of both HMG box domains known to affect DNA binding in vitro, and that binds poorly to mtDNA in vivo, complements deltaabf2 cells only weakly and greatly lessens the effect of overproduction on mtDNA instability. In vivo binding was assessed by colocalization to mtDNA of fusions between mutant or wild-type Abf2p and green fluorescent protein. These findings are discussed in the context of a model relating mtDNA copy number control and stability to mtDNA recombination.

Germline mitochondrial DNA mutations aggravate ageing and can impair brain development.

PubMed

Ross, Jaime M; Stewart, James B; Hagström, Erik; Brené, Stefan; Mourier, Arnaud; Coppotelli, Giuseppe; Freyer, Christoph; Lagouge, Marie; Hoffer, Barry J; Olson, Lars; Larsson, Nils-Göran

2013-09-19

Ageing is due to an accumulation of various types of damage, and mitochondrial dysfunction has long been considered to be important in this process. There is substantial sequence variation in mammalian mitochondrial DNA (mtDNA), and the high mutation rate is counteracted by different mechanisms that decrease maternal transmission of mutated mtDNA. Despite these protective mechanisms, it is becoming increasingly clear that low-level mtDNA heteroplasmy is quite common and often inherited in humans. We designed a series of mouse mutants to investigate the extent to which inherited mtDNA mutations can contribute to ageing. Here we report that maternally transmitted mtDNA mutations can induce mild ageing phenotypes in mice with a wild-type nuclear genome. Furthermore, maternally transmitted mtDNA mutations lead to anticipation of reduced fertility in mice that are heterozygous for the mtDNA mutator allele (PolgA(wt/mut)) and aggravate premature ageing phenotypes in mtDNA mutator mice (PolgA(mut/mut)). Unexpectedly, a combination of maternally transmitted and somatic mtDNA mutations also leads to stochastic brain malformations. Our findings show that a pre-existing mutation load will not only allow somatic mutagenesis to create a critically high total mtDNA mutation load sooner but will also increase clonal expansion of mtDNA mutations to enhance the normally occurring mosaic respiratory chain deficiency in ageing tissues. Our findings suggest that maternally transmitted mtDNA mutations may have a similar role in aggravating aspects of normal human ageing.

Anchoring plant metallothioneins to the inner face of the plasma membrane of Saccharomyces cerevisiae cells leads to heavy metal accumulation.

PubMed

Ruta, Lavinia Liliana; Lin, Ya-Fen; Kissen, Ralph; Nicolau, Ioana; Neagoe, Aurora Daniela; Ghenea, Simona; Bones, Atle M; Farcasanu, Ileana Cornelia

2017-01-01

In this study we engineered yeast cells armed for heavy metal accumulation by targeting plant metallothioneins to the inner face of the yeast plasma membrane. Metallothioneins (MTs) are cysteine-rich proteins involved in the buffering of excess metal ions, especially Cu(I), Zn(II) or Cd(II). The cDNAs of seven Arabidopsis thaliana MTs (AtMT1a, AtMT1c, AtMT2a, AtMT2b, AtMT3, AtMT4a and AtMT4b) and four Noccaea caerulescens MTs (NcMT1, NcMT2a, NcMT2b and NcMT3) were each translationally fused to the C-terminus of a myristoylation green fluorescent protein variant (myrGFP) and expressed in Saccharomyces cerevisiae cells. The myrGFP cassette introduced a yeast myristoylation sequence which allowed directional targeting to the cytosolic face of the plasma membrane along with direct monitoring of the intracellular localization of the recombinant protein by fluorescence microscopy. The yeast strains expressing plant MTs were investigated against an array of heavy metals in order to identify strains which exhibit the (hyper)accumulation phenotype without developing toxicity symptoms. Among the transgenic strains which could accumulate Cu(II), Zn(II) or Cd(II), but also non-canonical metal ions, such as Co(II), Mn(II) or Ni(II), myrGFP-NcMT3 qualified as the best candidate for bioremediation applications, thanks to the robust growth accompanied by significant accumulative capacity.

Linear mtDNA fragments and unusual mtDNA rearrangements associated with pathological deficiency of MGME1 exonuclease

PubMed Central

Nicholls, Thomas J.; Zsurka, Gábor; Peeva, Viktoriya; Schöler, Susanne; Szczesny, Roman J.; Cysewski, Dominik; Reyes, Aurelio; Kornblum, Cornelia; Sciacco, Monica; Moggio, Maurizio; Dziembowski, Andrzej; Kunz, Wolfram S.; Minczuk, Michal

2014-01-01

MGME1, also known as Ddk1 or C20orf72, is a mitochondrial exonuclease found to be involved in the processing of mitochondrial DNA (mtDNA) during replication. Here, we present detailed insights on the role of MGME1 in mtDNA maintenance. Upon loss of MGME1, elongated 7S DNA species accumulate owing to incomplete processing of 5′ ends. Moreover, an 11-kb linear mtDNA fragment spanning the entire major arc of the mitochondrial genome is generated. In contrast to control cells, where linear mtDNA molecules are detectable only after nuclease S1 treatment, the 11-kb fragment persists in MGME1-deficient cells. In parallel, we observed characteristic mtDNA duplications in the absence of MGME1. The fact that the breakpoints of these mtDNA rearrangements do not correspond to either classical deletions or the ends of the linear 11-kb fragment points to a role of MGME1 in processing mtDNA ends, possibly enabling their repair by homologous recombination. In agreement with its functional involvement in mtDNA maintenance, we show that MGME1 interacts with the mitochondrial replicase PolgA, suggesting that it is a constituent of the mitochondrial replisome, to which it provides an additional exonuclease activity. Thus, our results support the viewpoint that MGME1-mediated mtDNA processing is essential for faithful mitochondrial genome replication and might be required for intramolecular recombination of mtDNA. PMID:24986917

Reduced mitochondrial DNA content associates with poor prognosis of prostate cancer in African American men.

PubMed

Koochekpour, Shahriar; Marlowe, Timothy; Singh, Keshav K; Attwood, Kristopher; Chandra, Dhyan

2013-01-01

Reduction or depletion of mitochondrial DNA (mtDNA) has been associated with cancer progression. Although imbalanced mtDNA content is known to occur in prostate cancer, differences in mtDNA content between African American (AA) and Caucasian American (CA) men are not defined. We provide the first evidence that tumors in AA men possess reduced level of mtDNA compared to CA men. The median tumor mtDNA content was reduced in AA men. mtDNA content was also reduced in normal prostate tissues of AA men compared to CA men, suggesting a possible predisposition to cancer in AA men. mtDNA content was also reduced in benign prostatic hyperplasia (BPH) tissue from AA men. Tumor and BPH tissues from patients ≥ 60 years of age possess reduced mtDNA content compared to patients <60 years of age. In addition, mtDNA content was higher in normal tissues from patients with malignant T3 stage disease compared to patients with T2 stage disease. mtDNA levels in matched normal prostate tissues were nearly doubled in Gleason grade of >7 compared to ≤ 7, whereas reduced mtDNA content was observed in tumors of Gleason grade >7 compared to ≤ 7. Together, our data suggest that AA men possess lower mtDNA levels in normal and tumor tissues compared to CA men, which could contribute to higher risk and more aggressive prostate cancer in AA men.

METHYLATION OF ARSENIC BY RECOMBINANT HUMAN AS3MT/287M AND AS3MT/287T POLYMORPHS

EPA Science Inventory

Arsenic (+3 oxidation state) methyltransferase (AS3MT) is the key enzyme in the pathway for methylation of inorganic arsenic (iAs). AS3MT polymorphism is, in part, responsible for interindividual differences in iAs metabolism. AS3MT/M287T polymorphism that is found in ~ 10% of C...

Examining Dark Triad traits in relation to mental toughness and physical activity in young adults.

PubMed

Sabouri, Sarah; Gerber, Markus; Sadeghi Bahmani, Dena; Lemola, Sakari; Clough, Peter J; Kalak, Nadeem; Shamsi, Mahin; Holsboer-Trachsler, Edith; Brand, Serge

2016-01-01

The Dark Triad (DT) describes a set of three closely related personality traits: Machiavellianism, narcissism, and psychopathy. Mental toughness (MT) refers to a psychological construct combining confidence, commitment, control, and challenge. High MT is related to greater physical activity (PA) and, relative to men, women have lower MT scores. The aims of the present study were 1) to investigate the association between DT, MT, and PA, and 2) to compare the DT, MT, and PA scores of men and women. A total of 341 adults (M=29 years; 51.6% women; range: 18-37 years) took part in the study. Participants completed a series of questionnaires assessing DT, MT, and PA. Machiavellianism, narcissism, and psychopathy were all significantly associated with higher MT scores (rs =0.45, 0.50, and 0.20, respectively). DT traits and MT were associated with more vigorous PA. Compared to men, women participants had lower scores for DT traits (overall score and psychopathy), while no differences were found for MT or PA in both sexes. DT traits, high MT, and vigorous PA are interrelated. This pattern of results might explain why, for instance, successful professional athletes can at the same time be tough and ruthless.

The nucleotide exchange factor MGE exerts a key function in the ATP-dependent cycle of mt-Hsp70-Tim44 interaction driving mitochondrial protein import.

PubMed Central

Schneider, H C; Westermann, B; Neupert, W; Brunner, M

1996-01-01

Import of preproteins into the mitochondrial matrix is driven by the ATP-dependent interaction of mt-Hsp70 with the peripheral inner membrane import protein Tim44 and the preprotein in transit. We show that Mge1p, a co-chaperone of mt-Hsp70, plays a key role in the ATP-dependent import reaction cycle in yeast. Our data suggest a cycle in which the mt-Hsp70-Tim44 complex forms with ATP: Mge1p promotes assembly of the complex in the presence of ATP. Hydrolysis of ATP by mt-Hsp70 occurs in complex with Tim44. Mge1p is then required for the dissociation of the ADP form of mt-Hsp70 from Tim44 after release of inorganic phosphate but before release of ADP. ATP hydrolysis and complex dissociation are accompanied by tight binding of mt-Hsp70 to the preprotein in transit. Subsequently, the release of mt-Hsp70 from the polypeptide chain is triggered by Mge1p which promotes release of ADP from mt-Hsp70. Rebinding of ATP to mt-Hsp70 completes the reaction cycle. Images PMID:8918457

Decreased Circulating mtDNA Levels in Professional Male Volleyball Players.

PubMed

Nasi, Milena; Cristani, Alessandro; Pinti, Marcello; Lamberti, Igor; Gibellini, Lara; De Biasi, Sara; Guazzaloca, Alessandro; Trenti, Tommaso; Cossarizza, Andrea

2016-01-01

Exercise exerts various effects on the immune system, and evidence is emerging on its anti-inflammatory effects; the mechanisms on the basis of these modifications are poorly understood. Mitochondrial DNA (mtDNA) released from damaged cells acts as a molecule containing the so-called damage-associated molecular patterns and can trigger sterile inflammation. Indeed, high plasma levels of mtDNA are associated to several inflammatory conditions and physiological aging and longevity. The authors evaluated plasma mtDNA in professional male volleyball players during seasonal training and the possible correlation between mtDNA levels and clinical parameters, body composition, and physical performance. Plasma mtDNA was quantified by real-time PCR every 2 mo in 12 professional volleyball players (PVPs) during 2 consecutive seasons. As comparison, 20 healthy nonathlete male volunteers (NAs) were analyzed. The authors found lower levels of mtDNA in plasma of PVPs than in NAs. However, PVPs showed a decrease of circulating mtDNA only in the first season, while no appreciable variations were observed during the second season. No correlation was observed among mtDNA, hematochemical, and anthropometric parameters. Regular physical activity appeared associated with lower levels of circulating mtDNA, further confirming the protective, anti-inflammatory effect of exercise.

MT2-MMP-dependent release of collagen IV NC1 domains regulates submandibular gland branching morphogenesis

PubMed Central

Rebustini, Ivan T.; Myers, Christopher; Lassiter, Keyonica S.; Surmak, Andrew; Szabova, Ludmila; Holmbeck, Kenn; Pedchenko, Vadim; Hudson, Billy G.; Hoffman, Matthew P.

2009-01-01

Summary Proteolysis is essential during branching morphogenesis, but the roles of MT-MMPs and their proteolytic products are not clearly understood. Here we discover that decreasing MT-MMP activity during submandibular gland branching morphogenesis decreases proliferation and increases collagen IV and MT-MMP expression. Importantly, reducing epithelial MT2-MMP profoundly decreases proliferation and morphogenesis, increases Col4a2 and intracellular accumulation of collagen IV, and decreases the proteolytic release of collagen IV NC1 domains. Importantly, we demonstrate the presence of collagen IV NC1 domains in developing tissue. Furthermore, recombinant collagen IV NC1 domains rescue branching morphogenesis after MT2-siRNA-treatment, increasing MT-MMP and pro-proliferative gene expression via β1 integrin and PI3K-AKT signaling. Additionally, HBEGF also rescues MT2-siRNA-treatment, increasing NC1 domain release, proliferation, and MT2-MMP and Hbegf expression. Our studies provide mechanistic insight into how MT2-MMP-dependent release of bioactive NC1 domains from collagen IV is critical for integrating collagen IV synthesis and proteolysis with epithelial proliferation during branching morphogenesis. PMID:19853562

Recombination-dependent mtDNA partitioning: in vivo role of Mhr1p to promote pairing of homologous DNA.

PubMed

Ling, Feng; Shibata, Takehiko

2002-09-02

Yeast mhr1-1 was isolated as a defective mutation in mitochondrial DNA (mtDNA) recombination. About half of mhr1-1 cells lose mtDNA during growth at a higher temperature. Here, we show that mhr1-1 exhibits a defect in the partitioning of nascent mtDNA into buds and is a base-substitution mutation in MHR1 encoding a mitochondrial matrix protein. We found that the Mhr1 protein (Mhr1p) has activity to pair single-stranded DNA and homologous double-stranded DNA to form heteroduplex joints in vitro, and that mhr1-1 causes the loss of this activity, indicating its role in homologous mtDNA recombination. While the majority of the mtDNA in the mother cells consists of head-to-tail concatemers, more than half of the mtDNA in the buds exists as genome-sized monomers. The mhr1-1 deltacce1 double mutant cells do not maintain any mtDNA, indicating the strict dependence of mtDNA maintenance on recombination functions. These results suggest a mechanism for mtDNA inheritance similar to that operating in the replication and packaging of phage DNA.

Estimates of Continental Ancestry Vary Widely among Individuals with the Same mtDNA Haplogroup

PubMed Central

Emery, Leslie S.; Magnaye, Kevin M.; Bigham, Abigail W.; Akey, Joshua M.; Bamshad, Michael J.

2015-01-01

The association between a geographical region and an mtDNA haplogroup(s) has provided the basis for using mtDNA haplogroups to infer an individual’s place of origin and genetic ancestry. Although it is well known that ancestry inferences using mtDNA haplogroups and those using genome-wide markers are frequently discrepant, little empirical information exists on the magnitude and scope of such discrepancies between multiple mtDNA haplogroups and worldwide populations. We compared genetic-ancestry inferences made by mtDNA-haplogroup membership to those made by autosomal SNPs in ∼940 samples of the Human Genome Diversity Panel and recently admixed populations from the 1000 Genomes Project. Continental-ancestry proportions often varied widely among individuals sharing the same mtDNA haplogroup. For only half of mtDNA haplogroups did the highest average continental-ancestry proportion match the highest continental-ancestry proportion of a majority of individuals with that haplogroup. Prediction of an individual’s mtDNA haplogroup from his or her continental-ancestry proportions was often incorrect. Collectively, these results indicate that for most individuals in the worldwide populations sampled, mtDNA-haplogroup membership provides limited information about either continental ancestry or continental region of origin. PMID:25620206

Fission yeast Alp14 is a dose-dependent plus end–tracking microtubule polymerase

PubMed Central

Al-Bassam, Jawdat; Kim, Hwajin; Flor-Parra, Ignacio; Lal, Neeraj; Velji, Hamida; Chang, Fred

2012-01-01

XMAP215/Dis1 proteins are conserved tubulin-binding TOG-domain proteins that regulate microtubule (MT) plus-end dynamics. Here we show that Alp14, a XMAP215 orthologue in fission yeast, Schizosaccharomyces pombe, has properties of a MT polymerase. In vivo, Alp14 localizes to growing MT plus ends in a manner independent of Mal3 (EB1). alp14-null mutants display short interphase MTs with twofold slower assembly rate and frequent pauses. Alp14 is a homodimer that binds a single tubulin dimer. In vitro, purified Alp14 molecules track growing MT plus ends and accelerate MT assembly threefold. TOG-domain mutants demonstrate that tubulin binding is critical for function and plus end localization. Overexpression of Alp14 or only its TOG domains causes complete MT loss in vivo, and high Alp14 concentration inhibits MT assembly in vitro. These inhibitory effects may arise from Alp14 sequestration of tubulin and effects on the MT. Our studies suggest that Alp14 regulates the polymerization state of tubulin by cycling between a tubulin dimer–bound cytoplasmic state and a MT polymerase state that promotes rapid MT assembly. PMID:22696680

Stimulation of microtubule-based transport by nucleation of microtubules on pigment granules

PubMed Central

Semenova, Irina; Gupta, Dipika; Usui, Takeo; Hayakawa, Ichiro; Cowan, Ann; Rodionov, Vladimir

2017-01-01

Microtubule (MT)-based transport can be regulated through changes in organization of MT transport tracks, but the mechanisms that regulate these changes are poorly understood. In Xenopus melanophores, aggregation of pigment granules in the cell center involves their capture by the tips of MTs growing toward the cell periphery, and granule aggregation signals facilitate capture by increasing the number of growing MT tips. This increase could be explained by stimulation of MT nucleation either on the centrosome or on the aggregate of pigment granules that gradually forms in the cell center. We blocked movement of pigment granules to the cell center and compared the MT-nucleation activity of the centrosome in the same cells in two signaling states. We found that granule aggregation signals did not stimulate MT nucleation on the centrosome but did increase MT nucleation activity of pigment granules. Elevation of MT-nucleation activity correlated with the recruitment to pigment granules of a major component of MT-nucleation templates, γ-tubulin, and was suppressed by γ-tubulin inhibitors. We conclude that generation of new MT transport tracks by concentration of the leading pigment granules provides a positive feedback loop that enhances delivery of trailing granules to the cell center. PMID:28381426

Day-night and reproductive cycle profiles of melatonin receptor, kiss, and gnrh expression in orange-spotted grouper (Epinephelus coioides).

PubMed

Chai, Ke; Liu, Xiaochun; Zhang, Yong; Lin, Haoran

2013-07-01

It is suggested that the MT1 melatonin receptor mediates the effects of melatonin on reproduction in rodents. Three melatonin receptor types, MT1, MT2, and Mel1c, have been identified in fish. To understand the potential roles of each type of melatonin receptor on reproduction, we explored the day-night and reproductive cycle profiles of melatonin receptor, kiss, and gnrh expression in the orange-spotted grouper (Epinephelus coioides). cDNAs encoding melatonin receptors (MT1, MT2, and Mel1c) were first isolated from the brain of the orange-spotted grouper. Quantitative real-time PCR analysis demonstrated that the expression levels of MT1 and MT2 were higher in most of the brain areas and pituitary, while mel1c mRNA was mainly distributed in some peripheral tissues and the pituitary. The expression levels of MT1 were much higher than those of MT2 and mel1c in most of the brain regions, and the day-night expression variations of MT1 were counter to those of kiss2 and gnrh1. Reproductive cycle variations in MT1 daytime expression were different from those for kiss2 and gnrh1, and contrary to ovarian fecundity. Our results suggest that MT1 may modulate gnrh1 expression through kiss2, or may directly influence it. Together, these signal cascades may regulate the seasonal breeding of the orange-spotted grouper. As the day-length variations were consistent with the ovarian fecundity variation observed during the reproductive cycle, we infer that photoperiod affects ovarian development of the orange-spotted grouper through MT1. Copyright © 2013 Wiley Periodicals, Inc.

Solubility and stability of melatonin in propylene glycol and 2-hydroxypropyl-beta-cyclodextrin vehicles.

PubMed

Lee, B J; Choi, H G; Kim, C K; Parrott, K A; Ayres, J W; Sack, R L

1997-12-01

The physicochemical properties of melatonin (MT) in propylene glycol (PG) and 2-hydroxypropyl-beta-cyclodextrin (2-HPbetaCD) vehicles were characterized. MT was endothermally decomposed as determined by differential scanning calorimetry (DSC). Melting point and heat of fusion obtained were 116.9+/-0.24 degrees C and 7249+/-217 cal/mol, respectively. MT as received from a manufacture was very pure, at least 99.9%. The solubility of MT in PG solution increased slowly until reaching 40% PG and then steeply increased. Solubility of MT increased linearly as concentration of 2-HPbetaCD without PG increased (R(2)=0.993). MT solubility in the mixtures of PG and 2-HPbetaCD also increased linearly but was less than the sum of its solubility in 2-HPbetaCD and PG individually. The MT solubility was low in water, simulated gastric or intestinal fluid but the highest in the mixture of PG (40 v/v%) and 2-HPbetaCD (30 w/v%) although efficiency of MT solubilization in 2-HPbetaCD decreased as the concentration of PG increased. MT was degraded in a fashion of the first order kinetics (r(2)>0.90). MT was unstable in strong acidic solution (HCl-NaCl buffer, pH 1.4) but relatively stable in other pH values of 4 approximately 10 at 70 degrees C. In HCl-NaCl buffer, MT in 10% PG was more quickly degraded and then slowed down at a higher concentration. However, the degradation rate constant of MT in 2-HPbetaCD was not changed significantly when compared to the water. The current studies can be applied to the dosage formulations for the purpose of enhancing percutaneous absorption or bioavailability of MT.

Metabolic rescue in pluripotent cells from patients with mtDNA disease.

PubMed

Ma, Hong; Folmes, Clifford D L; Wu, Jun; Morey, Robert; Mora-Castilla, Sergio; Ocampo, Alejandro; Ma, Li; Poulton, Joanna; Wang, Xinjian; Ahmed, Riffat; Kang, Eunju; Lee, Yeonmi; Hayama, Tomonari; Li, Ying; Van Dyken, Crystal; Gutierrez, Nuria Marti; Tippner-Hedges, Rebecca; Koski, Amy; Mitalipov, Nargiz; Amato, Paula; Wolf, Don P; Huang, Taosheng; Terzic, Andre; Laurent, Louise C; Izpisua Belmonte, Juan Carlos; Mitalipov, Shoukhrat

2015-08-13

Mitochondria have a major role in energy production via oxidative phosphorylation, which is dependent on the expression of critical genes encoded by mitochondrial (mt)DNA. Mutations in mtDNA can cause fatal or severely debilitating disorders with limited treatment options. Clinical manifestations vary based on mutation type and heteroplasmy (that is, the relative levels of mutant and wild-type mtDNA within each cell). Here we generated genetically corrected pluripotent stem cells (PSCs) from patients with mtDNA disease. Multiple induced pluripotent stem (iPS) cell lines were derived from patients with common heteroplasmic mutations including 3243A>G, causing mitochondrial encephalomyopathy and stroke-like episodes (MELAS), and 8993T>G and 13513G>A, implicated in Leigh syndrome. Isogenic MELAS and Leigh syndrome iPS cell lines were generated containing exclusively wild-type or mutant mtDNA through spontaneous segregation of heteroplasmic mtDNA in proliferating fibroblasts. Furthermore, somatic cell nuclear transfer (SCNT) enabled replacement of mutant mtDNA from homoplasmic 8993T>G fibroblasts to generate corrected Leigh-NT1 PSCs. Although Leigh-NT1 PSCs contained donor oocyte wild-type mtDNA (human haplotype D4a) that differed from Leigh syndrome patient haplotype (F1a) at a total of 47 nucleotide sites, Leigh-NT1 cells displayed transcriptomic profiles similar to those in embryo-derived PSCs carrying wild-type mtDNA, indicative of normal nuclear-to-mitochondrial interactions. Moreover, genetically rescued patient PSCs displayed normal metabolic function compared to impaired oxygen consumption and ATP production observed in mutant cells. We conclude that both reprogramming approaches offer complementary strategies for derivation of PSCs containing exclusively wild-type mtDNA, through spontaneous segregation of heteroplasmic mtDNA in individual iPS cell lines or mitochondrial replacement by SCNT in homoplasmic mtDNA-based disease.

Effect of mirror therapy combined with somatosensory stimulation on motor recovery and daily function in stroke patients: A pilot study.

PubMed

Lin, Keh-Chung; Chen, Yu-Ting; Huang, Pai-Chuan; Wu, Ching-Yi; Huang, Wen-Ling; Yang, Hsiu-Wen; Lai, Hui-Tsz; Lu, Hung-Ju

2014-07-01

Mirror therapy (MT) has been recommended as a simple, inexpensive approach to treat motor dysfunction. The use of a mesh glove (MG) was suggested to normalize muscle tone that ameliorates motor impairment. Combining two efficient treatment protocols might maximize the benefits from training. This study investigated the effects of MT combined with MG (MG + MT) versus MT alone on motor performance and daily function after stroke. Sixteen patients with chronic unilateral stroke were recruited. A randomized two-group pretest and posttest design was used to randomly assign participants to MG + MT or MT groups. MT involves repetitive bimanual, symmetrical movement practice in which the individual moves the affected limb as much as she/he could while watching the reflective illusion of the unaffected limb's movements from a mirror. The MG + MT group wore a MG on the affected hand during the MT. The Modified Ashworth scale of muscle spasticity (MAS), Action Research Arm Test (ARAT), Box and Block Test (BBT), and Functional Independence Measure (FIM) were administered to evaluate spasticity, and motor and daily function. The results for the BBT (p = 0.013), total scores (p = 0.031), grasping subscales (p = 0.036) of ARAT, and FIM transfer scores (p = 0.013) presented significantly large effects in favor of the MG + MT group. Combining MG with MT significantly improves manual dexterity, grasping, and transfer performance. Adding the MG component into the MT likely increased the richness of sensory input and improved the movement performance more than MT alone. Copyright © 2012. Published by Elsevier B.V.

The XMAP215 Ortholog Alp14 Promotes Microtubule Nucleation in Fission Yeast.

PubMed

Flor-Parra, Ignacio; Iglesias-Romero, Ana Belén; Chang, Fred

2018-06-04

The organization and number of microtubules (MTs) in a cell depend on the proper regulation of MT nucleation. Currently, the mechanism of nucleation is the most poorly understood aspect of MT dynamics. XMAP215/chTOG/Alp14/Stu2 proteins are MT polymerases that stimulate MT polymerization at MT plus ends by binding and releasing tubulin dimers. Although these proteins also localize to MT organizing centers and have nucleating activity in vitro, it is not yet clear whether these proteins participate in MT nucleation in vivo. Here, we demonstrate that in the fission yeast Schizosaccharomyces pombe, the XMAP215 ortholog Alp14 is critical for efficient MT nucleation in vivo. In multiple assays, loss of Alp14 function led to reduced nucleation rate and numbers of interphase MT bundles. Conversely, activation of Alp14 led to increased nucleation frequency. Alp14 associated with Mto1 and γ-tubulin complex components, and artificially targeting Alp14 to the γ-tubulin ring complexes (γ-TuRCs) stimulated nucleation. In imaging individual nucleation events, we found that Alp14 transiently associated with a γ-tubulin particle shortly before the appearance of a new MT. The transforming acidic coiled-coil (TACC) ortholog Alp7 mediated the localization of Alp14 at nucleation sites but not plus ends, and was required for efficient nucleation but not for MT polymerization. Our findings provide the strongest evidence to date that Alp14 serves as a critical MT nucleation factor in vivo. We suggest a model in which Alp14 associates with the γ-tubulin complex in an Alp7-dependent manner to facilitate the assembly or stabilization of the nascent MT. Copyright © 2018 Elsevier Ltd. All rights reserved.

Melatonin regulates somatotrope and lactotrope function through common and distinct signaling pathways in cultured primary pituitary cells from female primates.

PubMed

Ibáñez-Costa, Alejandro; Córdoba-Chacón, José; Gahete, Manuel D; Kineman, Rhonda D; Castaño, Justo P; Luque, Raúl M

2015-03-01

Melatonin (MT) is secreted by the pineal gland and exhibits a striking circadian rhythm in its release. Depending on the species studied, some pituitary hormones also display marked circadian/seasonal patterns and rhythms of secretion. However, the precise relationship between MT and pituitary function remains controversial, and studies focusing on the direct role of MT in normal pituitary cells are limited to nonprimate species. Here, adult normal primate (baboons) primary pituitary cell cultures were used to determine the direct impact of MT on the functioning of all pituitary cell types from the pars distalis. MT increased GH and prolactin (PRL) expression/release in a dose- and time-dependent fashion, a response that was blocked by somatostatin. However, MT did not significantly affect ACTH, FSH, LH, or TSH expression/release. MT did not alter GHRH- or ghrelin-induced GH and/or PRL secretions, suggesting that MT may activate similar signaling pathways as ghrelin/GHRH. The effects of MT on GH/PRL release, which are likely mediated through MT1 receptor, involve both common (adenylyl cyclase/protein kinase A/extracellular calcium-channels) and distinct (phospholipase C/intracellular calcium-channels) signaling pathways. Actions of MT on pituitary cells also included regulation of the expression of other key components for the control of somatotrope/lactotrope function (GHRH, ghrelin, and somatostatin receptors). These results show, for the first time in a primate model, that MT directly regulates somatotrope/lactotrope function, thereby lending support to the notion that the actions of MT on these cells might substantially contribute to the define daily patterns of GH and PRL observed in primates and perhaps in humans.

Tissue- and cell-specific expression of metallothionein genes in cadmium- and copper-exposed mussels analyzed by in situ hybridization and RT-PCR

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zorita, I.; Bilbao, E.; Schad, A.

2007-04-15

Metallothioneins (MTs) are metal-inducible proteins that can be used as biomarkers of metal exposure. In mussels two families of MT isoforms (MT10 and MT20) have been characterized. In this study, mussels (Mytilus galloprovincialis) were exposed to 200 ppb Cd and 40 ppb Cu for 2 and 9 days to characterize the tissue and isoform specificity of metal-induced MT expression. Non-radioactive in situ hybridization demonstrated that both MT isoforms were mainly transcribed in digestive tubule epithelial cells, especially in basophilic cells. Weaker MT expression was detected in non-ciliated duct cells, stomach and gill epithelial cells, haemocytes, adipogranular cells, spermatic follicles andmore » oocytes. RT-PCR resulted in cloning of a novel M. galloprovincialis isoform homologous to recently cloned Mytilus edulis intron-less MT10B isoform. In gills, Cd only affected MT10 gene expression after 2 days of exposure while increases in MT protein levels occurred at day 9. In the digestive gland, a marked increase of both isoforms, but especially of MT20, was accompanied by increased levels of MT proteins and basophilic cell volume density (Vv{sub BAS}) after 2 and 9 days and of intralysosomal metal accumulation in digestive cells after 9 days. Conversely, although metal was accumulated in digestive cells lysosomes and the Vv{sub BAS} increased in Cu-exposed mussels, Cu exposure did not produce an increase of MT gene expression or MT protein levels. These data suggest that MTs are expressed in a tissue-, cell- and isoform-specific way in response to different metals.« less

Mt, St. Helens, Mt. Adams, and Mt. Rainier, WA, USA

NASA Technical Reports Server (NTRS)

1992-01-01

This view of Mt. St. Helens (46.5N, 122.0W), taken 12 years after the volcanic eruption on 18 May 1980, in which the top 1300 ft. of the 9,677 ft. mountain was blown away, shows the rapid vegetation recovery within the blast area. Many fir trees have grown to heights of 20 ft. within the 150 square mile devastated area. Mt. Adams, an extinct volcano is just to the west and Mt. Rainier is to the north. Checkerboard logging can be seen throughout.

Segregation and manifestations of the mtDNA tRNA[sup Lys] A[r arrow]G[sup (8344)] mutation of myoclonus epilepsy and ragged-red fibers (MERRF) syndrome

DOE Office of Scientific and Technical Information (OSTI.GOV)

Larsson, N.G.; Tulinius, M.H.; Holme, E.

1992-12-01

The authors have studied the segregation and manifestations of the tRNA[sup Lys] A[r arrow]G[sup (8344)] mutation of mtDNA. Three unrelated patients with myoclonus epilepsy and ragged-red fibers (MERRF) syndrome were investigated, along with 30 of their maternal relatives. Mutated mtDNA was not always found in the offspring of women carrying the tRNA[sup Lys] mutation. Four women had 10%-33% of mutated mtDNA in lymphocytes, and no mutated mtDNA was found in 7 of their 14 investigated children. The presence of mutated mtDNA was excluded at a level of 3:1,000. Five women had a proportion of 43%-73% mutated mtDNA in lymphocytes, andmore » mutated mtDNA was found in all their 12 investigated children. This suggests that the risk for transmission of mutated mtDNA to the offspring increases if high levels are present in the mother and that, above a threshold level of 35%-40%, it is very likely that transmission will occur to all children. The three patients with MERRF syndrone had, in muscle, both 94%-96% mutated mtDNA and biochemical and histochemical evidence of a respiratory-chain dysfunction. Four relatives had a proportion of 61%-92% mutated mtDNA in muscle, and biochemical measurements showed a normal respiratory-chain function in muscle in all cases. These findings suggest that >92% of mtDNA with the tRNA[sup Lys] mutation in muscle is required to cause a respiratory-chain dysfunction that can be detected by biochemical methods. There was a positive correlation between the levels of mtDNA with the tRNA[sup Lys] mutation in lymphocytes and the levels in muscle, in all nine investigated cases. The levels of mutated mtDNA were higher in muscle than in lymphocytes in all cases. 30 refs., 3 figs., 5 tabs.« less

Metallothionein expression is suppressed in primary human hepatocellular carcinomas and is mediated through inactivation of CCAAT/enhancer binding protein alpha by phosphatidylinositol 3-kinase signaling cascade.

PubMed

Datta, Jharna; Majumder, Sarmila; Kutay, Huban; Motiwala, Tasneem; Frankel, Wendy; Costa, Robert; Cha, Hyuk C; MacDougald, Ormond A; Jacob, Samson T; Ghoshal, Kalpana

2007-03-15

Reactive oxygen species (ROS) resulting from chronic inflammation cause liver injury leading to transformation of regenerating hepatocytes. Metallothioneins (MT), induced at high levels by oxidative stress, are potent scavengers of ROS. Here, we report that the levels of MT-1 and MT-2A are drastically reduced in primary human hepatocellular carcinomas (HCCs) and in diethylnitrosamine-induced liver tumors in mice, which is primarily due to transcriptional repression. Expression of the transcription factor, MTF-1, essential for MT expression, and its target gene Zn-T1 that encodes the zinc transporter-1 was not significantly altered in HCCs. Inhibitors of both phosphatidylinositol 3-kinase (PI3K) and its downstream target AKT increased expression of MT genes in HCC cells but not in liver epithelial cells. Suppression of MT-1 and MT-2A by ectopic expression of the constitutively active PI3K or AKT and their up-regulation by dominant-negative PI3K or AKT mutant confirmed negative regulation of MT expression by PI3K/AKT signaling pathway. Further, treatment of cells with a specific inhibitor of glycogen synthase kinase-3 (GSK-3), a downstream effector of PI3K/AKT, inhibited MT expression specifically in HCC cells. Short interfering RNA-mediated depletion of CCAAT/enhancer binding protein alpha (C/EBPalpha), a target of GSK-3, impeded MT expression, which could not be reversed by PI3K inhibitors. DNA binding activity of C/EBPalpha and its phosphorylation at T222 and T226 by GSK-3 are required for MT expression. MTF-1 and C/EBPalpha act in concert to increase MT-2A expression, which probably explains the high level of MT expression in the liver. This study shows the role of PI3K/AKT signaling pathway and C/EBPalpha in regulation of MT expression in hepatocarcinogenesis.

Identification of proteins associated with the yeast mitochondrial RNA polymerase by tandem affinity purification

PubMed Central

Markov, Dmitriy A; Savkina, Maria; Anikin, Michael; Del Campo, Mark; Ecker, Karen; Lambowitz, Alan M; De Gnore, Jon P; McAllister, William T

2009-01-01

The abundance of mitochondrial (mt) transcripts varies under different conditions, and is thought to depend upon rates of transcription initiation, transcription termination/attenuation and RNA processing/degradation. The requirement to maintain the balance between RNA synthesis and processing may involve coordination between these processes; however, little is known about factors that regulate the activity of mtRNA polymerase (mtRNAP). Recent attempts to identify mtRNAP–protein interactions in yeast by means of a generalized tandem affinity purification (TAP) protocol were not successful, most likely because they involved a C-terminal mtRNAP–TAP fusion (which is incompatible with mtRNAP function) and because of the use of whole-cell solubilization protocols that did not preserve the integrity of mt protein complexes. Based upon the structure of T7 RNAP (to which mtRNAPs show high sequence similarity), we identified positions in yeast mtRNAP that allow insertion of a small affinity tag, confirmed the mature N-terminus, constructed a functional N-terminal TAP–mtRNAP fusion, pulled down associated proteins, and identified them by LC–MS–MS. Among the proteins found in the pull-down were a DEAD-box protein (Mss116p) and an RNA-binding protein (Pet127p). Previous genetic experiments suggested a role for these proteins in linking transcription and RNA degradation, in that a defect in the mt degradadosome could be suppressed by overexpression of either of these proteins or, independently, by mutations in either mtRNAP or its initiation factor Mtf1p. Further, we found that Mss116p inhibits transcription by mtRNAP in vitro in a steady-state reaction. Our results support the hypothesis that Mss116p and Pet127p are involved in modulation of mtRNAP activity. Copyright © 2009 John Wiley & Sons, Ltd. PMID:19536766

Melatonin administration alters nicotine preference consumption via signaling through high-affinity melatonin receptors.

PubMed

Horton, William J; Gissel, Hannah J; Saboy, Jennifer E; Wright, Kenneth P; Stitzel, Jerry A

2015-07-01

While it is known that tobacco use varies across the 24-h day, the time-of-day effects are poorly understood. Findings from several previous studies indicate a potential role for melatonin in these time-of-day effects; however, the specific underlying mechanisms have not been well characterized. Understanding of these mechanisms may lead to potential novel smoking cessation treatments. The objective of this study is examine the role of melatonin and melatonin receptors in nicotine free-choice consumption A two-bottle oral nicotine choice paradigm was utilized with melatonin supplementation in melatonin-deficient mice (C57BL/6J) or without melatonin supplementation in mice proficient at melatonin synthesis (C3H/Ibg) compared to melatonin-proficient mice lacking both or one of the high-affinity melatonin receptors (MT1 and MT2; double-null mutant DM, or MT1 or MT2). Preference for bitter and sweet tastants also was assessed in wild-type and MT1 and MT2 DM mice. Finally, home cage locomotor monitoring was performed to determine the effect of melatonin administration on activity patterns. Supplemental melatonin in drinking water significantly reduced free-choice nicotine consumption in C57BL/6J mice, which do not produce endogenous melatonin, while not altering activity patterns. Independently, genetic deletion of both MT1 and MT2 receptors in a melatonin-proficient mouse strain (C3H) resulted in significantly more nicotine consumption than controls. However, single genetic deletion of either the MT1 or MT2 receptor alone did not result in increased nicotine consumption. Deletion of MT1 and MT2 did not impact taste preference. This study demonstrates that nicotine consumption can be affected by exogenous or endogenous melatonin and requires at least one of the high-affinity melatonin receptors. The fact that expression of either the MT1 or MT2 melatonin receptor is sufficient to maintain lower nicotine consumption suggests functional overlap and potential mechanistic explanations.

Acetic acid and aromatics units planned in China

DOE Office of Scientific and Technical Information (OSTI.GOV)

Alperowicz, N.

1993-01-27

The Shanghai Wujing Chemical Complex (SWCC; Shanghai) is proceeding with construction of an acetic acid plant. The 100,000-m.t./year until will use BP Chemicals carbonylation technology, originally developed by Monsanto. John Brown has been selected by China National Technical Import Corp. (CNTIC) to supply the plant, Chinese sources say. The UK contractor, which competed against Mitsui Engineering Shipbuilding (Tokyo) and Lurgi (Frankfurt), has built a similar plant for BP in the UK, although using different technology. The new plant will require 54,000 m.t./year of methanol, which is available onsite. Carbon monoxide will be delivered from a new plant. The acetic acidmore » unit will joint two other acetic plants in China supplied some time ago by Uhde (Dortmund). SWCC is due to be integrated with two adjacent complexes to form Shanghai Pacific Chemical. Meanwhile, four groups are competing to supply a UOP-process aromatics complex for Jilin Chemical Industrial Corp. They are Toyo Engineering, Lurgi, Lucky/Foster Wheeler, and Eurotechnica. The complex will include plants with annual capacities for 115,000 m.t. of benzene, 90,000 m.t. of ortho-xylene, 93,000 m.t. of mixed xylenes, and 20,000 m.t. of toluene. The plants will form part of a $2-billion petrochemical complex based on a 300,000-m.t./year ethylene plant awarded last year to a consortium of Samsung Engineering and Linde. Downstream plants will have annual capacities for 120,000 m.t. of linear low-density polyethylene, 80,000 m.t. of ethylene oxide, 100,000 m.t. of ethylene glycol, 80,000 m.t. of phenol, 100,000 m.t. of acrylonitrile, 20,000 m.t. of sodium cyanide, 40,000 m.t. of phthalic anhydride, 40,000 m.t. of ethylene propylene rubber, 20,000 m.t. of styrene butadiene styrene, and 30,000 m.t. of acrylic fiber.« less

Epoxyalkane:Coenzyme M Transferase Gene Diversity and Distribution in Groundwater Samples from Chlorinated-Ethene-Contaminated Sites

PubMed Central

Liu, Xikun

2016-01-01

ABSTRACT Epoxyalkane:coenzyme M transferase (EaCoMT) plays a critical role in the aerobic biodegradation and assimilation of alkenes, including ethene, propene, and the toxic chloroethene vinyl chloride (VC). To improve our understanding of the diversity and distribution of EaCoMT genes in the environment, novel EaCoMT-specific terminal-restriction fragment length polymorphism (T-RFLP) and nested-PCR methods were developed and applied to groundwater samples from six different contaminated sites. T-RFLP analysis revealed 192 different EaCoMT T-RFs. Using clone libraries, we retrieved 139 EaCoMT gene sequences from these samples. Phylogenetic analysis revealed that a majority of the sequences (78.4%) grouped with EaCoMT genes found in VC- and ethene-assimilating Mycobacterium strains and Nocardioides sp. strain JS614. The four most-abundant T-RFs were also matched with EaCoMT clone sequences related to Mycobacterium and Nocardioides strains. The remaining EaCoMT sequences clustered within two emergent EaCoMT gene subgroups represented by sequences found in propene-assimilating Gordonia rubripertincta strain B-276 and Xanthobacter autotrophicus strain Py2. EaCoMT gene abundance was positively correlated with VC and ethene concentrations at the sites studied. IMPORTANCE The EaCoMT gene plays a critical role in assimilation of short-chain alkenes, such as ethene, VC, and propene. An improved understanding of EaCoMT gene diversity and distribution is significant to the field of bioremediation in several ways. The expansion of the EaCoMT gene database and identification of incorrectly annotated EaCoMT genes currently in the database will facilitate improved design of environmental molecular diagnostic tools and high-throughput sequencing approaches for future bioremediation studies. Our results further suggest that potentially significant aerobic VC degraders in the environment are not well represented in pure culture. Future research should aim to isolate and characterize aerobic VC-degrading bacteria from these underrepresented groups. PMID:27016563

Development of forensic-quality full mtGenome haplotypes: success rates with low template specimens.

PubMed

Just, Rebecca S; Scheible, Melissa K; Fast, Spence A; Sturk-Andreaggi, Kimberly; Higginbotham, Jennifer L; Lyons, Elizabeth A; Bush, Jocelyn M; Peck, Michelle A; Ring, Joseph D; Diegoli, Toni M; Röck, Alexander W; Huber, Gabriela E; Nagl, Simone; Strobl, Christina; Zimmermann, Bettina; Parson, Walther; Irwin, Jodi A

2014-05-01

Forensic mitochondrial DNA (mtDNA) testing requires appropriate, high quality reference population data for estimating the rarity of questioned haplotypes and, in turn, the strength of the mtDNA evidence. Available reference databases (SWGDAM, EMPOP) currently include information from the mtDNA control region; however, novel methods that quickly and easily recover mtDNA coding region data are becoming increasingly available. Though these assays promise to both facilitate the acquisition of mitochondrial genome (mtGenome) data and maximize the general utility of mtDNA testing in forensics, the appropriate reference data and database tools required for their routine application in forensic casework are lacking. To address this deficiency, we have undertaken an effort to: (1) increase the large-scale availability of high-quality entire mtGenome reference population data, and (2) improve the information technology infrastructure required to access/search mtGenome data and employ them in forensic casework. Here, we describe the application of a data generation and analysis workflow to the development of more than 400 complete, forensic-quality mtGenomes from low DNA quantity blood serum specimens as part of a U.S. National Institute of Justice funded reference population databasing initiative. We discuss the minor modifications made to a published mtGenome Sanger sequencing protocol to maintain a high rate of throughput while minimizing manual reprocessing with these low template samples. The successful use of this semi-automated strategy on forensic-like samples provides practical insight into the feasibility of producing complete mtGenome data in a routine casework environment, and demonstrates that large (>2kb) mtDNA fragments can regularly be recovered from high quality but very low DNA quantity specimens. Further, the detailed empirical data we provide on the amplification success rates across a range of DNA input quantities will be useful moving forward as PCR-based strategies for mtDNA enrichment are considered for targeted next-generation sequencing workflows. Copyright © 2014 The Authors. Published by Elsevier Ireland Ltd.. All rights reserved.

Additional mitochondrial DNA influences the interactions between the nuclear and mitochondrial genomes in a bovine embryo model of nuclear transfer.

PubMed

Srirattana, Kanokwan; St John, Justin C

2018-05-08

We generated cattle embryos using mitochondrial supplementation and somatic cell nuclear transfer (SCNT), named miNT, to determine how additional mitochondrial DNA (mtDNA) modulates the nuclear genome. To eliminate any confounding effects from somatic cell mtDNA in intraspecies SCNT, donor cell mtDNA was depleted prior to embryo production. Additional oocyte mtDNA did not affect embryo development rates but increased mtDNA copy number in blastocyst stage embryos. Moreover, miNT-derived blastocysts had different gene expression profiles when compared with SCNT-derived blastocysts. Additional mtDNA increased expression levels of genes involved in oxidative phosphorylation, cell cycle and DNA repair. Supplementing the embryo culture media with a histone deacetylase inhibitor, Trichostatin A (TSA), had no beneficial effects on the development of miNT-derived embryos, unlike SCNT-derived embryos. When compared with SCNT-derived blastocysts cultured in the presence of TSA, additional mtDNA alone had beneficial effects as the activity of glycolysis may increase and embryonic cell death may decrease. However, these beneficial effects were not found with additional mtDNA and TSA together, suggesting that additional mtDNA alone enhances reprogramming. In conclusion, additional mtDNA increased mtDNA copy number and expression levels of genes involved in energy production and embryo development in blastocyst stage embryos emphasising the importance of nuclear-mitochondrial interactions.

Paternal leakage of mitochondrial DNA in experimental crosses of populations of the potato cyst nematode Globodera pallida.

PubMed

Hoolahan, Angelique H; Blok, Vivian C; Gibson, Tracey; Dowton, Mark

2011-12-01

Animal mtDNA is typically assumed to be maternally inherited. Paternal mtDNA has been shown to be excluded from entering the egg or eliminated post-fertilization in several animals. However, in the contact zones of hybridizing species and populations, the reproductive barriers between hybridizing organisms may not be as efficient at preventing paternal mtDNA inheritance, resulting in paternal leakage. We assessed paternal mtDNA leakage in experimental crosses of populations of a cyst-forming nematode, Globodera pallida. A UK population, Lindley, was crossed with two South American populations, P5A and P4A. Hybridization of these populations was supported by evidence of nuclear DNA from both the maternal and paternal populations in the progeny. To assess paternal mtDNA leakage, a ~3.4 kb non-coding mtDNA region was analyzed in the parental populations and in the progeny. Paternal mtDNA was evident in the progeny of both crosses involving populations P5A and P4A. Further, paternal mtDNA replaced the maternal mtDNA in 22 and 40 % of the hybrid cysts from these crosses, respectively. These results indicate that under appropriate conditions, paternal leakage occurs in the mtDNA of parasitic nematodes, and supports the hypothesis that hybrid zones facilitate paternal leakage. Thus, assumptions of strictly maternal mtDNA inheritance may be frequently violated, particularly when divergent populations interbreed.

Immobilization of metallothionein to carbon paste electrode surface via anti-MT antibodies and its use for biosensing of silver.

PubMed

Trnkova, Libuse; Krizkova, Sona; Adam, Vojtech; Hubalek, Jaromir; Kizek, Rene

2011-01-15

In this paper, heavy metal biosensor based on immobilization of metallothionein (MT) to the surface of carbon paste electrode (CPE) via anti-MT-antibodies is reported. First, the evaluation of MT electroactivity was done. The attention was focused on the capturing of MT to the CPE surface. Antibodies incorporated and mixed into carbon paste were stable; even after two weeks the observed changes in signal height were lower than 5%. Further, the interaction of MT with polyclonal chicken antibodies incorporated in carbon paste electrode was determined by square-wave voltammetry. In the voltammogram, two signals--labelled as cys(MT) and W(a)--were observed. The cys(MT) corresponded to -SH moieties of MT and W(a) corresponded to tryptophan residues of chicken antibodies. Time of interaction (300 s) and MT concentration (125 μg/ml) were optimized to suggest a silver(I) ions biosensor. Biosensor (CPE modified with anti-MT antibody) prepared under the optimized conditions was then used for silver(I) ions detection. The detection limit (3 S/N) for silver(I) ions was estimated as 0.5 nM. The proposed biosensor was tested by detection spiking of silver(I) ions in various water samples (from very pure distilled water to rainwater). Recoveries varied from 74 to 104%. Copyright © 2010 Elsevier B.V. All rights reserved.

Efficient inhibition of heavy metal release from mine tailings against acid rain exposure by triethylenetetramine intercalated montmorillonite (TETA-Mt).

PubMed

Gong, Beini; Wu, Pingxiao; Huang, Zhujian; Li, Yuanyuan; Yang, Shanshan; Dang, Zhi; Ruan, Bo; Kang, Chunxi

2016-11-15

The potential application of triethylenetetramine intercalated montmorillonite (TETA-Mt) in mine tailings treatment and AMD (acid mine drainage) remediation was investigated with batch experiments. The structural and morphological characteristics of TETA-Mt were analyzed with XRD, FTIR, DTG-TG and SEM. The inhibition efficiencies of TETA-Mt against heavy metal release from mine tailings when exposed to acid rain leaching was examined and compared with that of triethylenetetramine (TETA) and Mt. Results showed that the overall inhibition by TETA-Mt surpassed that by TETA or Mt for various heavy metal ions over an acid rain pH range of 3-5.6 and a temperature range of 25-40°C. When mine tailings were exposed to acid rain of pH 4.8 (the average rain pH of the mining site where the mine tailings were from), TETA-Mt achieved an inhibition efficiency of over 90% for Cu(2+), Zn(2+), Cd(2+) and Mn(2+) release, and 70% for Pb(2+) at 25°C. It was shown that TETA-Mt has a strong buffering capacity. Moreover, TETA-Mt was able to adsorb heavy metal ions and the adsorption process was fast, suggesting that coordination was mainly responsible. These results showed the potential of TETA-Mt in AMD mitigation, especially in acid rain affected mining area. Copyright © 2016 Elsevier B.V. All rights reserved.

Molecular Insights into the Potential Toxicological Interaction of 2-Mercaptothiazoline with the Antioxidant Enzyme—Catalase

PubMed Central

Huang, Zhenxing; Huang, Ming; Mi, Chenyu; Wang, Tao; Chen, Dong; Teng, Yue

2016-01-01

2-mercaptothiazoline (2-MT) is widely used in many industrial fields, but its residue is potentially harmful to the environment. In this study, to evaluate the biological toxicity of 2-MT at protein level, the interaction between 2-MT and the pivotal antioxidant enzyme—catalase (CAT) was investigated using multiple spectroscopic techniques and molecular modeling. The results indicated that the CAT fluorescence quenching caused by 2-MT should be dominated by a static quenching mechanism through formation of a 2-MT/CAT complex. Furthermore, the identifications of the binding constant, binding forces, and the number of binding sites demonstrated that 2-MT could spontaneously interact with CAT at one binding site mainly via Van der Waals’ forces and hydrogen bonding. Based on the molecular docking simulation and conformation dynamic characterization, it was found that 2-MT could bind into the junctional region of CAT subdomains and that the binding site was close to enzyme active sites, which induced secondary structural and micro-environmental changes in CAT. The experiments on 2-MT toxicity verified that 2-MT significantly inhibited CAT activity via its molecular interaction, where 2-MT concentration and exposure time both affected the inhibitory action. Therefore, the present investigation provides useful information for understanding the toxicological mechanism of 2-MT at the molecular level. PMID:27537873

Parental Perceptions, Experiences, and Desires of Music Therapy

PubMed Central

Kong, Ha-Kyung; Karahalios, Karrie

2016-01-01

Music therapy (MT) is a therapeutic practice where a therapist uses music to enhance the life quality for their patients. Children have an innate enjoyment of music, making music an effective medium for exploring their potential. In this study, we explore the parental perception of MT through an online survey. Contrary to the public perception that MT only addresses emotional needs, 47 out of 59 parents reported seeing improvements in other areas including behavioral, cognitive, linguistic, and social changes. All but one parent indicated that they would recommend MT to others. The survey results further revealed that even parents of children participating in MT had misconceptions regarding MT, which we describe in the paper. Parents reported inaccessibility and cost as other major limitations surrounding MT adoption. We conclude by discussing how technology solutions could mitigate issues with definition, distance, and cost, while maintaining the benefits of MT. PMID:28269946

Thermodynamics of Pb(ii) and Zn(ii) binding to MT-3, a neurologically important metallothionein.

PubMed

Carpenter, M C; Shami Shah, A; DeSilva, S; Gleaton, A; Su, A; Goundie, B; Croteau, M L; Stevenson, M J; Wilcox, D E; Austin, R N

2016-06-01

Isothermal titration calorimetry (ITC) was used to quantify the thermodynamics of Pb(2+) and Zn(2+) binding to metallothionein-3 (MT-3). Pb(2+) binds to zinc-replete Zn7MT-3 displacing each zinc ion with a similar change in free energy (ΔG) and enthalpy (ΔH). EDTA chelation measurements of Zn7MT-3 and Pb7MT-3 reveal that both metal ions are extracted in a tri-phasic process, indicating that they bind to the protein in three populations with different binding thermodynamics. Metal binding is entropically favoured, with an enthalpic penalty that reflects the enthalpic cost of cysteine deprotonation accompanying thiolate ligation of the metal ions. These data indicate that Pb(2+) binding to both apo MT-3 and Zn7MT-3 is thermodynamically favourable, and implicate MT-3 in neuronal lead biochemistry.

Parental Perceptions, Experiences, and Desires of Music Therapy.

PubMed

Kong, Ha-Kyung; Karahalios, Karrie

2016-01-01

Music therapy (MT) is a therapeutic practice where a therapist uses music to enhance the life quality for their patients. Children have an innate enjoyment of music, making music an effective medium for exploring their potential. In this study, we explore the parental perception of MT through an online survey. Contrary to the public perception that MT only addresses emotional needs, 47 out of 59 parents reported seeing improvements in other areas including behavioral, cognitive, linguistic, and social changes. All but one parent indicated that they would recommend MT to others. The survey results further revealed that even parents of children participating in MT had misconceptions regarding MT, which we describe in the paper. Parents reported inaccessibility and cost as other major limitations surrounding MT adoption. We conclude by discussing how technology solutions could mitigate issues with definition, distance, and cost, while maintaining the benefits of MT.

Fourier transform infrared spectra and molecular structure of 5-methoxytryptamine, N-acetyl-5-methoxytryptamine and N-phenylsulfonamide-5-methoxytryptamine

NASA Astrophysics Data System (ADS)

Bayari, S.; Ide, S.

2003-04-01

5-Methoxytryptamine (5-MT) is a potent antioxidant and has radioprotective action. N-acetyl-5-methoxytryptamine (melatonin, NA-5-MT) is a free radical scavenger and antioxidant, which protects against oxidative damage due to a variety of toxicants. The infrared spectra of 5-MT, NA-5-MT and new synthesized N-phenylsulfonamide-5-methoxytryptamine (PS-5-MT) were investigated in the region between 4000 and 400 cm -1. Vibrational assignments of the molecules have been made for fundamental modes on the basis of the group vibrational concept, infrared intensity and comparison with the assignments for related molecules. X-ray powder diffraction patterns of molecules were also recorded. In order to optimize the geometries of the molecules, molecular mechanic calculations (MM3) were performed. Conformational analysis of 5-MT, NA-5-MT and PS-5-MT was also established by the using PM3 method.

A role for recombination junctions in the segregation of mitochondrial DNA in yeast.

PubMed

Lockshon, D; Zweifel, S G; Freeman-Cook, L L; Lorimer, H E; Brewer, B J; Fangman, W L

1995-06-16

In S. cerevisiae, mitochondrial DNA (mtDNA) molecules, in spite of their high copy number, segregate as if there were a small number of heritable units. The rapid segregation of mitochondrial genomes can be analyzed using mtDNA deletion variants. These small, amplified genomes segregate preferentially from mixed zygotes relative to wild-type mtDNA. This segregation advantage is abolished by mutations in a gene, MGT1, that encodes a recombination junction-resolving enzyme. We show here that resolvase deficiency causes a larger proportion of molecules to be linked together by recombination junctions, resulting in the aggregation of mtDNA into a small number of cytological structures. This change in mtDNA structure can account for the increased mitotic loss of mtDNA and the altered pattern of mtDNA segregation from zygotes. We propose that the level of unresolved recombination junctions influences the number of heritable units of mtDNA.

MT3DMS: Model use, calibration, and validation

USGS Publications Warehouse

Zheng, C.; Hill, Mary C.; Cao, G.; Ma, R.

2012-01-01

MT3DMS is a three-dimensional multi-species solute transport model for solving advection, dispersion, and chemical reactions of contaminants in saturated groundwater flow systems. MT3DMS interfaces directly with the U.S. Geological Survey finite-difference groundwater flow model MODFLOW for the flow solution and supports the hydrologic and discretization features of MODFLOW. MT3DMS contains multiple transport solution techniques in one code, which can often be important, including in model calibration. Since its first release in 1990 as MT3D for single-species mass transport modeling, MT3DMS has been widely used in research projects and practical field applications. This article provides a brief introduction to MT3DMS and presents recommendations about calibration and validation procedures for field applications of MT3DMS. The examples presented suggest the need to consider alternative processes as models are calibrated and suggest opportunities and difficulties associated with using groundwater age in transport model calibration.

Structural insight into TPX2-stimulated microtubule assembly

PubMed Central

2017-01-01

During mitosis and meiosis, microtubule (MT) assembly is locally upregulated by the chromatin-dependent Ran-GTP pathway. One of its key targets is the MT-associated spindle assembly factor TPX2. The molecular mechanism of how TPX2 stimulates MT assembly remains unknown because structural information about the interaction of TPX2 with MTs is lacking. Here, we determine the cryo-electron microscopy structure of a central region of TPX2 bound to the MT surface. TPX2 uses two flexibly linked elements (’ridge’ and ‘wedge’) in a novel interaction mode to simultaneously bind across longitudinal and lateral tubulin interfaces. These MT-interacting elements overlap with the binding site of importins on TPX2. Fluorescence microscopy-based in vitro reconstitution assays reveal that this interaction mode is critical for MT binding and facilitates MT nucleation. Together, our results suggest a molecular mechanism of how the Ran-GTP gradient can regulate TPX2-dependent MT formation. PMID:29120325

Induction of metallothionein in mouse cerebellum and cerebrum with low-dose thimerosal injection.

PubMed

Minami, Takeshi; Miyata, Eriko; Sakamoto, Yamato; Yamazaki, Hideo; Ichida, Seiji

2010-04-01

Thimerosal, an ethyl mercury compound, is used worldwide as a vaccine preservative. We previously observed that the mercury concentration in mouse brains did not increase with the clinical dose of thimerosal injection, but the concentration increased in the brain after the injection of thimerosal with lipopolysaccharide, even if a low dose of thimerosal was administered. Thimerosal may penetrate the brain, but is undetectable when a clinical dose of thimerosal is injected; therefore, the induction of metallothionein (MT) messenger RNA (mRNA) and protein was observed in the cerebellum and cerebrum of mice after thimerosal injection, as MT is an inducible protein. MT-1 mRNA was expressed at 6 and 9 h in both the cerebrum and cerebellum, but MT-1 mRNA expression in the cerebellum was three times higher than that in the cerebrum after the injection of 12 microg/kg thimerosal. MT-2 mRNA was not expressed until 24 h in both organs. MT-3 mRNA was expressed in the cerebellum from 6 to 15 h after the injection, but not in the cerebrum until 24 h. MT-1 and MT-3 mRNAs were expressed in the cerebellum in a dose-dependent manner. Furthermore, MT-1 protein was detected from 6 to 72 h in the cerebellum after 12 microg/kg of thimerosal was injected and peaked at 10 h. MT-2 was detected in the cerebellum only at 10 h. In the cerebrum, little MT-1 protein was detected at 10 and 24 h, and there were no peaks of MT-2 protein in the cerebrum. In conclusion, MT-1 and MT-3 mRNAs but not MT-2 mRNA are easily expressed in the cerebellum rather than in the cerebrum by the injection of low-dose thimerosal. It is thought that the cerebellum is a sensitive organ against thimerosal. As a result of the present findings, in combination with the brain pathology observed in patients diagnosed with autism, the present study helps to support the possible biological plausibility for how low-dose exposure to mercury from thimerosal-containing vaccines may be associated with autism.

Correlation of sex ratio at birth with health and socioeconomic indicators.

PubMed

Grech, Victor

2018-03-01

The sex ratio at birth (male divided by total live births: M/T) has been mooted as a potential sentinel health indicator. Several metrics indicate individual countries' health and socioeconomic status. In this study, in all available countries (where such data was accessible), M/T and these indicators were compared in order to ascertain whether better (vis-à-vis health and socioeconomic status) levels of these indicators were associated with higher M/T in available countries. The following were obtained (by country) from various sources: M/T, infant mortality rate, under 5 years mortality rate, fertility rate, Human Development Index, gross domestic product per capita, life expectancy for both sexes, females, males, as well as both sexes Health Adjusted Life Expectancy (HALE). Pearson correlation was performed comparing M/T and these indicators. Despite weak correlation values, all except for the Human Development Index (HDI) correlated with M/T at statistically significant levels. A decrease in mortality and an increase in life expectancy and GDP/capita are indicators of socioeconomic wellbeing. In this study, mortality was negatively correlated with M/T. Life expectancy and GDP/capita were both positively correlated with M/T, indicating that M/T may also serve as a surrogate health indicator, and incidentally, also supporting the Trivers-Willard hypothesis. Improving economies lead to increasing education, which in turns tends to lower fertility rate in association with a declining M/T. In conclusion, the global correlation of health and socioeconomic indicators with M/T suggests that M/T may be a useful sentinel health indicator. Copyright © 2018 Elsevier B.V. All rights reserved.

Metallothioneins regulate the adipogenic differentiation of 3T3-L1 cells via the insulin signaling pathway

PubMed Central

Toriuchi, Yuriko; Aki, Yuka; Mizuno, Yuto; Kawakami, Takashige; Nakaya, Tomoko; Sato, Masao; Suzuki, Shinya

2017-01-01

Knockout of metallothionein (MT) genes contributes to a heavier body weight in early life and the potential to become obese through the intake of a high fat diet (HFD) in mice. It has thus been suggested that MT genes regulate the formation of adipose tissue, which would become the base for later HFD-induced obesity. We evaluated the fat pads of mice during the lactation stage. The fat mass and adipocyte size of MT1 and MT2 knockout mice were greater than those of wild type mice. Next, we assayed the ability of small interfering RNA (siRNA) to silence MT genes in the 3T3-L1 cell line. The expressions of MT1 and MT2 genes were transiently upregulated during adipocyte differentiation, and the siRNA pretreatment led to the suppression of the expression of both MT mRNAs and proteins. The MT siRNA promoted lipid accumulation in adipocytes and caused proliferation of post-confluent preadipocytes; these effects were suppressed by an inhibitor of phosphatidylinositol 3-kinase (LY294002). In addition, MT siRNA promoted insulin-stimulated phosphorylation of Akt, a downstream kinase of the insulin signaling pathway. Enhanced lipid accumulation in 3T3-L1 cells resulting from MT-gene silencing was inhibited by pretreatment with an antioxidant, N-acetylcysteine, used as a substitute for antioxidant protein MTs. These results suggest that interference in MT expression enhanced the activation of the insulin signaling pathway, resulting in higher lipid accumulation in 3T3-L1 adipocytes. PMID:28426713

Diagnostic utility of daytime salivary melatonin levels in Smith-Magenis syndrome.

PubMed

Chik, Constance L; Rollag, Mark D; Duncan, Wallace C; Smith, Ann C M

2010-01-01

An inverted circadian rhythm of melatonin (MT) likely contributes to the sleep disturbance in patients with Smith-Magenis syndrome (SMS). Plasma MT levels have documented this altered rhythm, but daytime levels of salivary MT has not been determined. Daytime measures of salivary MT might have utility in home/outpatient settings for assessing MT levels in undiagnosed patients with clinical features of SMS. The objective of this study was to determine the utility of daytime salivary MT as a diagnostic test in SMS. Thirty individuals with confirmed SMS [28 with del 17p11.2 and 2 with the retinoic acid induced 1 (RAI1) gene mutation] and five controls were studied. Single or serial daytime salivary MT levels were measured. The mean midday salivary MT level was 79.0 pg/ml in SMS patients, compared with 16.3 pg/ml in controls, with nine patients having values similar to controls. The median MT level in SMS patients was 49.0 pg/ml (first and third quartile values = 15.5 and 106.8 pg/ml). Twenty-six (90%) of 29 patients had at least one MT value >15.5 pg/ml, including 70 (78%) of 90 samples from patients with del 17p11.2 and one (20%) of five samples from the two patients with the RAI1 mutation. Neither the pattern of medication use nor age had an effect on daytime salivary MT levels. Although most SMS patients had elevated daytime salivary MT levels, multiple sampling appears necessary to distinguish patients with SMS from other conditions.

The Mitochondrial Genome Impacts Respiration but Not Fermentation in Interspecific Saccharomyces Hybrids

PubMed Central

Rigoulet, Michel; Salin, Benedicte; Masneuf-Pomarede, Isabelle; de Vienne, Dominique; Sicard, Delphine; Bely, Marina; Marullo, Philippe

2013-01-01

In eukaryotes, mitochondrial DNA (mtDNA) has high rate of nucleotide substitution leading to different mitochondrial haplotypes called mitotypes. However, the impact of mitochondrial genetic variant on phenotypic variation has been poorly considered in microorganisms because mtDNA encodes very few genes compared to nuclear DNA, and also because mitochondrial inheritance is not uniparental. Here we propose original material to unravel mitotype impact on phenotype: we produced interspecific hybrids between S. cerevisiae and S. uvarum species, using fully homozygous diploid parental strains. For two different interspecific crosses involving different parental strains, we recovered 10 independent hybrids per cross, and allowed mtDNA fixation after around 80 generations. We developed PCR-based markers for the rapid discrimination of S. cerevisiae and S. uvarum mitochondrial DNA. For both crosses, we were able to isolate fully isogenic hybrids at the nuclear level, yet possessing either S. cerevisiae mtDNA (Sc-mtDNA) or S. uvarum mtDNA (Su-mtDNA). Under fermentative conditions, the mitotype has no phenotypic impact on fermentation kinetics and products, which was expected since mtDNA are not necessary for fermentative metabolism. Alternatively, under respiratory conditions, hybrids with Sc-mtDNA have higher population growth performance, associated with higher respiratory rate. Indeed, far from the hypothesis that mtDNA variation is neutral, our work shows that mitochondrial polymorphism can have a strong impact on fitness components and hence on the evolutionary fate of the yeast populations. We hypothesize that under fermentative conditions, hybrids may fix stochastically one or the other mt-DNA, while respiratory environments may increase the probability to fix Sc-mtDNA. PMID:24086452

Age-related decline in mitochondrial DNA copy number in isolated human pancreatic islets.

PubMed

Cree, L M; Patel, S K; Pyle, A; Lynn, S; Turnbull, D M; Chinnery, P F; Walker, M

2008-08-01

Pancreatic beta cell function has been shown to decline with age in man. Depletion of mitochondrial DNA (mtDNA) copy number is associated with impaired insulin secretion in pancreatic beta cell lines, and decreased mtDNA copy number has been observed with age in skeletal muscle in man. We investigated whether mtDNA copy number decreases with age in human pancreatic beta cells, which might in turn contribute to the age-related decline in insulin secretory capacity. We quantified mtDNA copy number in isolated human islet preparations from 15 pancreas donors aged between 17 and 75 years. Islets (n = 20) were individually hand-picked and pooled from each donor isolate for the quantification of mtDNA copy number and deleted mtDNA (%), which were determined using real-time PCR methods. There was a significant negative correlation between mtDNA copy number and islet donor age (r = -0.53, p = 0.044). mtDNA copy number was significantly decreased in islet preparations from donors aged > or =50 years (n = 8) compared with those aged <50 years (n = 7) (median [interquartile range]: 418 [236-503] vs 596 [554-729] mtDNA copy number/diploid genome; p = 0.032). None of the islet preparations harboured high levels of deleted mtDNA affecting the major arc. Given the correlation between mtDNA content and respiratory chain activity, the age-related decrease in mtDNA copy number that we observed in human pancreatic islet preparations may contribute to the age-dependent decline in pancreatic beta cell insulin secretory capacity.

Altered mitochondrial genome content signals worse pathology and prognosis in prostate cancer.

PubMed

Kalsbeek, Anton M F; Chan, Eva K F; Grogan, Judith; Petersen, Desiree C; Jaratlerdsiri, Weerachai; Gupta, Ruta; Lyons, Ruth J; Haynes, Anne-Maree; Horvath, Lisa G; Kench, James G; Stricker, Phillip D; Hayes, Vanessa M

2018-01-01

Mitochondrial genome (mtDNA) content is depleted in many cancers. In prostate cancer, there is intra-glandular as well as inter-patient mtDNA copy number variation. In this study, we determine if mtDNA content can be used as a predictor for prostate cancer staging and outcomes. Fresh prostate cancer biopsies from 115 patients were obtained at time of surgery. All cores underwent pathological review, followed by isolation of cancer and normal tissue. DNA was extracted and qPCR performed to quantify the total amount of mtDNA as a ratio to genomic DNA. Differences in mtDNA content were compared for prostate cancer pathology features and disease outcomes. We showed a significantly reduced mtDNA content in prostate cancer compared with normal adjacent prostate tissue (mean difference 1.73-fold, P-value <0.001). Prostate cancer with increased mtDNA content showed unfavorable pathologic characteristics including, higher disease stage (PT2 vs PT3 P-value = 0.018), extracapsular extension (P-value = 0.02) and a trend toward an increased Gleason score (P-value = 0.064). No significant association was observed between changes in mtDNA content and biochemical recurrence (median follow up of 107 months). Contrary to other cancer types, prostate cancer tissue shows no universally depleted mtDNA content. Rather, the change in mtDNA content is highly variable, mirroring known prostate cancer genome heterogeneity. Patients with high mtDNA content have an unfavorable pathology, while a high mtDNA content in normal adjacent prostate tissue is associated with worse prognosis. © 2017 Wiley Periodicals, Inc.

Diverse Peptide Hormones Affecting Root Growth Identified in the Medicago truncatula Secreted Peptidome.

PubMed

Patel, Neha; Mohd-Radzman, Nadiatul A; Corcilius, Leo; Crossett, Ben; Connolly, Angela; Cordwell, Stuart J; Ivanovici, Ariel; Taylor, Katia; Williams, James; Binos, Steve; Mariani, Michael; Payne, Richard J; Djordjevic, Michael A

2018-01-01

Multigene families encoding diverse secreted peptide hormones play important roles in plant development. A need exists to efficiently elucidate the structures and post-translational-modifications of these difficult-to-isolate peptide hormones in planta so that their biological functions can be determined. A mass spectrometry and bioinformatics approach was developed to comprehensively analyze the secreted peptidome of Medicago hairy root cultures and xylem sap. We identified 759 spectra corresponding to the secreted products of twelve peptide hormones including four CEP ( C -TERMINALLY E NCODED P EPTIDE), two CLE ( CL V3/ E NDOSPERM SURROUNDING REGION RELATED) and six XAP ( X YLEM SAP A SSOCIATED P EPTIDE) peptides. The MtCEP1, MtCEP2, MtCEP5 and MtCEP8 peptides identified differed in post-translational-modifications. Most were hydroxylated at conserved proline residues but some MtCEP1 derivatives were tri-arabinosylated. In addition, many CEP peptides possessed unexpected N - and C -terminal extensions. The pattern of these extensions suggested roles for endo- and exoproteases in CEP peptide maturation. Longer than expected, hydroxylated and homogeneously modified mono- and tri-arabinosylated CEP peptides corresponding to their in vivo structures were chemically synthesized to probe the effect of these post-translational-modifications on function. The ability of CEP peptides to elevate root nodule number was increased by hydroxylation at key positions. MtCEP1 peptides with N -terminal extensions or with tri-arabinosylation modification, however, were unable to impart increased nodulation. The MtCLE5 and MtCLE17 peptides identified were of precise size, and inhibited main root growth and increased lateral root number. Six XAP peptides, each beginning with a conserved DY sulfation motif, were identified including MtXAP1a, MtXAP1b, MtXAP1c, MtXAP3, MtXAP5 and MtXAP7. MtXAP1a and MtXAP5 inhibited lateral root emergence. Transcriptional analyses demonstrated peptide hormone gene expression in the root vasculature and tip. Since hairy roots can be induced on many plants, their corresponding root cultures may represent ideal source materials to efficiently identify diverse peptide hormones in vivo in a broad range of species. © 2018 by The American Society for Biochemistry and Molecular Biology, Inc.

Mitochondrial dysfunction in migraine.

PubMed

Yorns, William R; Hardison, H Huntley

2013-09-01

Migraine is the most frequent type of headache in children. In the 1980s, scientists first hypothesized a connection between migraine and mitochondrial (mt) disorders. More recent studies have suggested that at least some subtypes of migraine may be related to a mt defect. Different types of evidence support a relationship between mitochondria (mt) and migraine: (1) Biochemical evidence: Abnormal mt function translates into high intracellular penetration of Ca(2+), excessive production of free radicals, and deficient oxidative phosphorylation, which ultimately causes energy failure in neurons and astrocytes, thus triggering migraine mechanisms, including spreading depression. The mt markers of these events are low activity of superoxide dismutase, activation of cytochrome-c oxidase and nitric oxide, high levels of lactate and pyruvate, and low ratios of phosphocreatine-inorganic phosphate and N-acetylaspartate-choline. (2) Morphologic evidence: mt abnormalities have been shown in migraine sufferers, the most characteristic ones being direct observation in muscle biopsy of ragged red and cytochrome-c oxidase-negative fibers, accumulation of subsarcolemmal mt, and demonstration of giant mt with paracrystalline inclusions. (3) Genetic evidence: Recent studies have identified specific mutations responsible for migraine susceptibility. However, the investigation of the mtDNA mutations found in classic mt disorders (mt encephalomyopathy with lactic acidosis and stroke-like episodes, myoclonus epilepsy with ragged red fibers, Kearns-Sayre syndrome, and Leber hereditary optic neuropathy) has not demonstrated any association. Recently, 2 common mtDNA polymorphisms (16519C→T and 3010G→A) have been associated with pediatric cyclic vomiting syndrome and migraine. Also, POLG mutations (eg, p.T851 A, p.N468D, p.Y831C, p.G517V, and p.P163S) can cause disease through impaired replication of mtDNA, including migraine. Further studies to investigate the relationship between mtDNA and migraine will require very large sample sizes to obtain statistically significant results. (4) Therapeutic evidence: Several agents that have a positive effect on mt metabolism have shown to be effective in the treatment of migraines. The agents include riboflavin (B2), coenzyme Q10, magnesium, niacin, carnitine, topiramate, and lipoic acid. Further study is warranted to learn how mt interact with other factors to cause migraines. This will facilitate the development of new and more specific treatments that will reduce the frequency or severity or both of this disease. © 2013 Published by Elsevier Inc.

Kinetic changes in tetanic Ca2+ transients in enzymatically dissociated muscle fibres under repetitive stimulation

PubMed Central

Calderón, Juan C; Bolaños, Pura; Caputo, Carlo

2011-01-01

Abstract We used enzymatically dissociated flexor digitorum brevis (FDB) and soleus fibres loaded with the fast Ca2+ dye Magfluo-4 AM, and adhered to Laminin, to test whether repetitive stimulation induces progressive changes in the kinetics of Ca2+ release and reuptake in a fibre-type-dependent fashion. We applied a protocol of tetani of 350 ms, 100 Hz, every 4 s to reach a mean amplitude reduction of 25% of the first peak. Morphology type I (MT-I) and morphology type II (MT-II) fibres underwent a total of 96 and 52.8 tetani (P < 0.01 between groups), respectively. The MT-II fibres (n = 18) showed significant reductions of the amplitude (19%), an increase in rise time (8.5%) and a further reduction of the amplitude/rise time ratio (25.5%) of the first peak of the tetanic transient after 40 tetani, while MT-I fibres (n = 5) did not show any of these changes. However, both fibre types showed significant reductions in the maximum rate of rise of the first peak after 40 tetani. Two subpopulations among the MT-II fibres could be distinguished according to Ca2+ reuptake changes. Fast-fatigable MT-II fibres (fMT-II) showed an increase of 32.2% in the half-width value of the first peak, while for fatigue-resistant MT-II fibres (rMT-II), the increase amounted to 6.9%, both after 40 tetani. Significant and non-significant increases of 36.4% and 11.9% in the first time constant of decay (t1) values were seen after 40 tetani in fMT-II and rMT-II fibres, respectively. MT-I fibres did not show kinetic changes in any of the Ca2+ reuptake variables. All changes were reversed after an average recovery of 7.5 and 15.4 min for MT-I and MT-II fibres, respectively. Further experiments ruled out the possibility that the differences in the kinetic changes of the first peak of the Ca2+ transients between fibres MT-I and MT-II could be related to the inactivation of Ca2+ release mechanism. In conclusion, we established a model of enzymatically dissociated fibres, loaded with Magfluo-4 and adhered to Laminin, to study muscle fatigue and demonstrated fibre-type-dependent, fatigue-induced kinetic changes in both Ca2+ release and reuptake. PMID:21878526

Mitochondrial Nucleoid: Shield and Switch of the Mitochondrial Genome

PubMed Central

2017-01-01

Mitochondria preserve very complex and distinctively unique machinery to maintain and express the content of mitochondrial DNA (mtDNA). Similar to chromosomes, mtDNA is packaged into discrete mtDNA-protein complexes referred to as a nucleoid. In addition to its role as a mtDNA shield, over 50 nucleoid-associated proteins play roles in mtDNA maintenance and gene expression through either temporary or permanent association with mtDNA or other nucleoid-associated proteins. The number of mtDNA(s) contained within a single nucleoid is a fundamental question but remains a somewhat controversial issue. Disturbance in nucleoid components and mutations in mtDNA were identified as significant in various diseases, including carcinogenesis. Significant interest in the nucleoid structure and its regulation has been stimulated in relation to mitochondrial diseases, which encompass diseases in multicellular organisms and are associated with accumulation of numerous mutations in mtDNA. In this review, mitochondrial nucleoid structure, nucleoid-associated proteins, and their regulatory roles in mitochondrial metabolism are briefly addressed to provide an overview of the emerging research field involving mitochondrial biology. PMID:28680532

Thermostability of native and pegylated Myceliophthora thermophila laccase in aqueous and mixed solvents.

PubMed

López-Cruz, J I; Viniegra-Gonzalez, G; Hernández-Arana, A

2006-01-01

A commercial preparation of laccase (EC 1.10.3.2), cloned from Myceliophthora thermophila and expressed in Aspergillus oryzae (MtL), was purified and modified by conjugation with poly(ethylene glycol) (M(r) = 5000) and is labeled PEG-MtL. Native enzyme was found to have a molecular mass of 80 kDa, as determined by gel filtration, and 110 kDa, by SDS-PAGE. The oxidative dimerization of 2,6-dimethoxyphenol (DMP) to produce the corresponding dibenzoquinone was catalyzed by MtL in a manner comparable to that for a diffusion-controlled reaction (k(cat)/K(M) approximately = 10(8) M(-)(1) s(-)(1) and E(a) approximately = 18 kJ M(-)(1)). PEG-MtL was found, by TNBS titration, to have blocked 54% of lysine groups; its hydrodynamic and charge properties were different from those of MtL. Catalytic efficiency (k(cat)/K(M)) of PEG-MtL was similar to that of MtL with DMP as substrate; however, k(cat)/K(M) was 2-fold reduced for the reaction in which 2',2-azinobis(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS) is oxidized to form a radical cation. E(a) values were similar in both enzyme preparations when assayed in buffered solutions. Far-UV CD spectra were similar for MtL and PEG-MtL and consistent with a protein rich in beta-sheet structure with negligible content of alpha-helices. A blue shift of near-UV CD spectrum for PEG-MtL as compared to MtL was consistent with the decreased polarity of the tyrosyl side chains upon PEG conjugation. Also the blue band of the copper active site was shifted from lambda approximately 610 nm (MtL) to lambda approximately 575 nm (PEG-MtL). Scanning microcalorimetry showed small denaturation enthalpies (6.3 and 7.5 J g(-)(1) for MtL and PEG-MtL, respectively), indicating the high stability of the beta-sheet folding pattern of laccases. However, PEG-MtL proved to be more stable, its half-denaturation temperature being 2 degrees C higher than that of MtL. In 30% alcohol, pegylated laccase showed slower enzyme-activity decay rates than the unmodified enzyme; this behavior was caused by a decrease in the activation entropy of the denaturation reaction. Results can be explained by entropic stabilization by PEG conjugation because of the restricted motion of some surface amino acid side chains, which results in a more stable active site.

44 CFR 15.2 - Definitions.

Code of Federal Regulations, 2012 CFR

2012-10-01

... GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY TRAINING.... Weather means the Mt. Weather Emergency Operations Center, Bluemont, Virginia. Mt. Weather Executive Director means the Executive Director of the Mt. Weather Emergency Operations Center. NETC means the...

44 CFR 15.2 - Definitions.

Code of Federal Regulations, 2014 CFR

2014-10-01

... SECURITY GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY.... Weather means the Mt. Weather Emergency Operations Center, Bluemont, Virginia. Mt. Weather Executive Director means the Executive Director of the Mt. Weather Emergency Operations Center. NETC means the...

44 CFR 15.2 - Definitions.

Code of Federal Regulations, 2011 CFR

2011-10-01

... SECURITY GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY.... Weather means the Mt. Weather Emergency Operations Center, Bluemont, Virginia. Mt. Weather Executive Director means the Executive Director of the Mt. Weather Emergency Operations Center. NETC means the...

44 CFR 15.2 - Definitions.

Code of Federal Regulations, 2013 CFR

2013-10-01

... SECURITY GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY.... Weather means the Mt. Weather Emergency Operations Center, Bluemont, Virginia. Mt. Weather Executive Director means the Executive Director of the Mt. Weather Emergency Operations Center. NETC means the...

44 CFR 15.2 - Definitions.

Code of Federal Regulations, 2010 CFR

2010-10-01

... SECURITY GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY.... Weather means the Mt. Weather Emergency Operations Center, Bluemont, Virginia. Mt. Weather Executive Director means the Executive Director of the Mt. Weather Emergency Operations Center. NETC means the...

MtMAPKK4 is an essential gene for growth and reproduction of Medicago truncatula.

PubMed

Chen, Tao; Zhou, Bo; Duan, Liujian; Zhu, Hui; Zhang, Zhongming

2017-04-01

Mitogen-activated protein kinase (MAPK) cascades are universal signaling modules in eukaryotes, including yeasts, animals and plants. They are involved in responses to various biotic and abiotic stresses, hormones, cell division and developmental processes. A MAPK cascade is composed of three functionally tiered protein kinases, namely MAPK, MAPK kinases (MAPKKs) and MAPK kinase kinases (MAPKKKs). These kinases have been intensively studied for their roles in developmental and physiological processes in various organisms. In this study, a Medicago truncatula MtMAPKK4 mutant with the tobacco retrotransposon Tnt1 insertion was identified using reverse genetics methods. No homozygous progeny could be produced by self-pollination of mapkk4/+ heterozygotes for 5 generations. Heterozygous mapkk4/+ mutant plants exhibited growth retardation, chlorosis symptoms and significantly reduced numbers of infection threads and nodules. The interaction between MtMAPKK4 and MtMAPK3/6 occurred both in yeast and in planta. Green fluorescent protein-tagged MtMAPKK4, MtMAPK3 and MtMAPK6 were all localized to membranes, cytoplasm and nuclei. Expression of MtMAPKK4, MtMAPK3 and MtMAPK6 was detected in various tissues of M. truncatula plants at the nodule maturation stage. Transcript levels of these genes were decreased in roots at the early symbiotic stage. © 2016 Scandinavian Plant Physiology Society.

WSJointInv2D-MT-DCR: An efficient joint two-dimensional magnetotelluric and direct current resistivity inversion

NASA Astrophysics Data System (ADS)

Amatyakul, Puwis; Vachiratienchai, Chatchai; Siripunvaraporn, Weerachai

2017-05-01

An efficient joint two-dimensional direct current resistivity (DCR) and magnetotelluric (MT) inversion, referred to as WSJointInv2D-MT-DCR, was developed with FORTRAN 95 based on the data space Occam's inversion algorithm. Our joint inversion software can be used to invert just the MT data or the DCR data, or invert both data sets simultaneously to get the electrical resistivity structures. Since both MT and DCR surveys yield the same resistivity structures, the two data types enhance each other leading to a better interpretation. Two synthetic and a real field survey are used here to demonstrate that the joint DCR and MT surveys can help constrain each other to reduce the ambiguities occurring when inverting the DCR or MT alone. The DCR data increases the lateral resolution of the near surface structures while the MT data reveals the deeper structures. When the MT apparent resistivity suffers from the static shift, the DCR apparent resistivity can serve as a replacement for the estimation of the static shift factor using the joint inversion. In addition, we also used these examples to show the efficiency of our joint inversion code. With the availability of our new joint inversion software, we expect the number of joint DCR and MT surveys to increase in the future.

Snow cover correlation between Mt. Villarrica and Mt. Lliama in Chile

NASA Astrophysics Data System (ADS)

Kim, Jeong-Cheol; Park, Sung-Hwan; Jung, Hyung-Sup

2014-11-01

The Southern Volcanic Zone (SVZ) of Chile consists of many volcanoes, and all of the volcanoes are covered with snow at the top of mountain. Monitoring snow cover variations in these regions can give us a key parameter in order to understand the mechanisms of volcanic activity. In this study, we investigate on the volcanic activity and snow cover interaction from snow cover area mapping, snow-line extraction. The study areas cover Mt. Villarrica and Mt. Llaima, Chile. Both of them are most active volcanos in SVZ. Sixty Landsat TM and Landsat ETM+ images are used for observing snow cover variations of Mt. Villarrica and Mt. Llaima, spanning the 25 years from September 1986 to February 2011. Results show that snow cover area between volcanic activity and non-activity are largely changed from 42.84 km2 to 13.41 km2, temporarily decreased 79% at the Mt. Villarrica and from 28.98 km2 to 3.82 km2, temporarily decreased 87% at the Mt. Villarrica. The snow line elevation of snow cover retreated by approximately 260 m from 1,606m to 1,871 m at the Mt. Villarrica, approximately 266m from 1,741m to 2,007m at the Mt. Llaima. The results show that there are definitely correlations between snow cover and volcanic activity.

Novel mitochondrial gene content and gene arrangement indicate illegitimate inter-mtDNA recombination in the chigger mite, Leptotrombidium pallidum.

PubMed

Shao, Renfu; Mitani, Harumi; Barker, Stephen C; Takahashi, Mamoru; Fukunaga, Masahito

2005-06-01

To better understand the evolution of mitochondrial (mt) genomes in the Acari (mites and ticks), we sequenced the mt genome of the chigger mite, Leptotrombidium pallidum (Arthropoda: Acari: Acariformes). This genome is highly rearranged relative to that of the hypothetical ancestor of the arthropods and the other species of Acari studied. The mt genome of L. pallidum has two genes for large subunit rRNA, a pseudogene for small subunit rRNA, and four nearly identical large noncoding regions. Nineteen of the 22 tRNAs encoded by this genome apparently lack either a T-arm or a D-arm. Further, the mt genome of L. pallidum has two distantly separated sections with identical sequences but opposite orientations of transcription. This arrangement cannot be accounted for by homologous recombination or by previously known mechanisms of mt gene rearrangement. The most plausible explanation for the origin of this arrangement is illegitimate inter-mtDNA recombination, which has not been reported previously in animals. In light of the evidence from previous experiments on recombination in nuclear and mt genomes of animals, we propose a model of illegitimate inter-mtDNA recombination to account for the novel gene content and gene arrangement in the mt genome of L. pallidum.

Altering the Mitochondrial Fatty Acid Synthesis (mtFASII) Pathway Modulates Cellular Metabolic States and Bioactive Lipid Profiles as Revealed by Metabolomic Profiling

PubMed Central

Clay, Hayley B.; Parl, Angelika K.; Mitchell, Sabrina L.; Singh, Larry; Bell, Lauren N.; Murdock, Deborah G.

2016-01-01

Despite the presence of a cytosolic fatty acid synthesis pathway, mitochondria have retained their own means of creating fatty acids via the mitochondrial fatty acid synthesis (mtFASII) pathway. The reason for its conservation has not yet been elucidated. Therefore, to better understand the role of mtFASII in the cell, we used thin layer chromatography to characterize the contribution of the mtFASII pathway to the fatty acid composition of selected mitochondrial lipids. Next, we performed metabolomic analysis on HeLa cells in which the mtFASII pathway was either hypofunctional (through knockdown of mitochondrial acyl carrier protein, ACP) or hyperfunctional (through overexpression of mitochondrial enoyl-CoA reductase, MECR). Our results indicate that the mtFASII pathway contributes little to the fatty acid composition of mitochondrial lipid species examined. Additionally, loss of mtFASII function results in changes in biochemical pathways suggesting alterations in glucose utilization and redox state. Interestingly, levels of bioactive lipids, including lysophospholipids and sphingolipids, directly correlate with mtFASII function, indicating that mtFASII may be involved in the regulation of bioactive lipid levels. Regulation of bioactive lipid levels by mtFASII implicates the pathway as a mediator of intracellular signaling. PMID:26963735

Early zygote-specific nuclease in mitochondria of the true slime mold Physarum polycephalum.

PubMed

Moriyama, Yohsuke; Yamazaki, Tomokazu; Nomura, Hideo; Sasaki, Narie; Kawano, Shigeyuki

2005-11-01

The active, selective digestion of mtDNA from one parent is a possible molecular mechanism for the uniparental inheritance of mtDNA. In Physarum polycephalum, mtDNA is packed by DNA-binding protein Glom, which packs mtDNA into rod-shaped mt-nucleoids. After the mating, mtDNA from one parent is selectively digested, and the Glom began to disperse. Dispersed Glom was retained for at least 6 h after mtDNA digestion, but disappeared completely by about 12 h after mixing two strains. We identified two novel nucleases using DNA zymography with native-PAGE and SDS-PAGE. One is a Ca2+-dependent, high-molecular-weight nuclease complex (about 670 kDa), and the other is a Mn2+-dependent, high-molecular-weight nuclease complex (440-670 kDa); the activity of the latter was detected as a Mn2+-dependent, 13-kDa DNase band on SDS-PAGE. All mitochondria isolated from myxamoebae had mt-nucleoids, whereas half of the mitochondria isolated from the zygotes at 12 h after mixing had lost the mt-nucleoids. The activity of the Mn2+-dependent nuclease in the isolated mitochondria was detected at least 8 h after mixing of two strains. The timing and localization of the Mn2+-dependent DNase activity matched the selective digestion of mtDNA.

APC functions at the centrosome to stimulate microtubule growth.

PubMed

Lui, Christina; Ashton, Cahora; Sharma, Manisha; Brocardo, Mariana G; Henderson, Beric R

2016-01-01

The adenomatous polyposis coli (APC) tumor suppressor is multi-functional. APC is known to localize at the centrosome, and in mitotic cells contributes to formation of the mitotic spindle. To test whether APC contributes to nascent microtubule (MT) growth at interphase centrosomes, we employed MT regrowth assays in U2OS cells to measure MT assembly before and after nocodazole treatment and release. We showed that siRNA knockdown of full-length APC delayed both initial MT aster formation and MT elongation/regrowth. In contrast, APC-mutant SW480 cancer cells displayed a defect in MT regrowth that was unaffected by APC knockdown, but which was rescued by reconstitution of full-length APC. Our findings identify APC as a positive regulator of centrosome MT initial assembly and suggest that this process is disrupted by cancer mutations. We confirmed that full-length APC associates with the MT-nucleation factor γ-tubulin, and found that the APC cancer-truncated form (1-1309) also bound to γ-tubulin through APC amino acids 1-453. While binding to γ-tubulin may help target APC to the site of MT nucleation complexes, additional C-terminal sequences of APC are required to stimulate and stabilize MT growth. Copyright © 2015 Elsevier Ltd. All rights reserved.

Cumulative mtDNA damage and mutations contribute to the progressive loss of RGCs in a rat model of glaucoma

PubMed Central

Nickerson, John M.; Gao, Feng-juan; Sun, Zhongmou; Chen, Xin-ya; Zhang, Shu-jie; Gao, Feng; Chen, Jun-yi; Luo, Yi; Wang, Yan; Sun, Xing-huai

2015-01-01

Glaucoma is a chronic neurodegenerative disease characterized by the progressive loss of retinal ganglion cells (RGCs). Mitochondrial DNA (mtDNA) alterations have been documented as a key component of many neurodegenerative disorders. However, whether mtDNA alterations contribute to the progressive loss of RGCs and the mechanism whereby this phenomenon could occur are poorly understood. We investigated mtDNA alterations in RGCs using a rat model of chronic intraocular hypertension and explored the mechanisms underlying progressive RGC loss. We demonstrate that the mtDNA damage and mutations triggered by intraocular pressure (IOP) elevation are initiating, crucial events in a cascade leading to progressive RGC loss. Damage to and mutation of mtDNA, mitochondrial dysfunction, reduced levels of mtDNA repair/replication enzymes, and elevated reactive oxygen species form a positive feedback loop that produces irreversible mtDNA damage and mutation and contributes to progressive RGC loss, which occurs even after a return to normal IOP. Furthermore, we demonstrate that mtDNA damage and mutations increase the vulnerability of RGCs to elevated IOP and glutamate levels, which are among the most common glaucoma insults. This study suggests that therapeutic approaches that target mtDNA maintenance and repair and that promote energy production may prevent the progressive death of RGCs. PMID:25478814

Examining Dark Triad traits in relation to mental toughness and physical activity in young adults

PubMed Central

Sabouri, Sarah; Gerber, Markus; Sadeghi Bahmani, Dena; Lemola, Sakari; Clough, Peter J; Kalak, Nadeem; Shamsi, Mahin; Holsboer-Trachsler, Edith; Brand, Serge

2016-01-01

Objective The Dark Triad (DT) describes a set of three closely related personality traits: Machiavellianism, narcissism, and psychopathy. Mental toughness (MT) refers to a psychological construct combining confidence, commitment, control, and challenge. High MT is related to greater physical activity (PA) and, relative to men, women have lower MT scores. The aims of the present study were 1) to investigate the association between DT, MT, and PA, and 2) to compare the DT, MT, and PA scores of men and women. Methods A total of 341 adults (M=29 years; 51.6% women; range: 18–37 years) took part in the study. Participants completed a series of questionnaires assessing DT, MT, and PA. Results Machiavellianism, narcissism, and psychopathy were all significantly associated with higher MT scores (rs =0.45, 0.50, and 0.20, respectively). DT traits and MT were associated with more vigorous PA. Compared to men, women participants had lower scores for DT traits (overall score and psychopathy), while no differences were found for MT or PA in both sexes. Conclusion DT traits, high MT, and vigorous PA are interrelated. This pattern of results might explain why, for instance, successful professional athletes can at the same time be tough and ruthless. PMID:26869790

Methylation of arsenic by recombinant human wild-type arsenic (+ 3 oxidation state) methyltransferase and its methionine 287 threonine (M287T) polymorph: Role of glutathione

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ding, Lan; Saunders, R. Jesse; Drobná, Zuzana

2012-10-01

Arsenic (+ 3 oxidation state) methyltransferase (AS3MT) is the key enzyme in the pathway for methylation of arsenicals. A common polymorphism in the AS3MT gene that replaces a threonyl residue in position 287 with a methionyl residue (AS3MT/M287T) occurs at a frequency of about 10% among populations worldwide. Here, we compared catalytic properties of recombinant human wild-type (wt) AS3MT and AS3MT/M287T in reaction mixtures containing S-adenosylmethionine, arsenite (iAs{sup III}) or methylarsonous acid (MAs{sup III}) as substrates and endogenous or synthetic reductants, including glutathione (GSH), a thioredoxin reductase (TR)/thioredoxin (Trx)/NADPH reducing system, or tris (2-carboxyethyl) phosphine hydrochloride (TCEP). With either TR/Trx/NADPHmore » or TCEP, wtAS3MT or AS3MT/M287T catalyzed conversion of iAs{sup III} to MAs{sup III}, methylarsonic acid (MAs{sup V}), dimethylarsinous acid (DMAs{sup III}), and dimethylarsinic acid (DMAs{sup V}); MAs{sup III} was converted to DMAs{sup III} and DMAs{sup V}. Although neither enzyme required GSH to support methylation of iAs{sup III} or MAs{sup III}, addition of 1 mM GSH decreased K{sub m} and increased V{sub max} estimates for either substrate in reaction mixtures containing TR/Trx/NADPH. Without GSH, V{sub max} and K{sub m} values were significantly lower for AS3MT/M287T than for wtAS3MT. In the presence of 1 mM GSH, significantly more DMAs{sup III} was produced from iAs{sup III} in reactions catalyzed by the M287T variant than in wtAS3MT-catalyzed reactions. Thus, 1 mM GSH modulates AS3MT activity, increasing both methylation rates and yield of DMAs{sup III}. AS3MT genotype exemplified by differences in regulation of wtAS3MT and AS3MT/M287T-catalyzed reactions by GSH may contribute to differences in the phenotype for arsenic methylation and, ultimately, to differences in the disease susceptibility in individuals chronically exposed to inorganic arsenic. -- Highlights: ► Human AS3MT and AS3MT(M287T) require a dithiol reductant for optimal activity. ► Both enzymes methylate arsenite to tri- and pentavalent methylated metabolites. ► Neither enzyme requires glutathione (GSH) to methylate arsenite or methylarsonite. ► However, in presence of a dithiol addition of 1 mM GSH increases methylation rates. ► In presence of 1 mM GSH, AS3MT(M287T) produces more dimethylarsinite than AS3MT.« less

Comparative glacio-climatological analysis of mass balance variability along the geographical margin of Europe

NASA Astrophysics Data System (ADS)

Lehoczky, Annamária; Kern, Zoltán; Pongrácz, Rita

2014-05-01

Glacio-climatological studies recognise glacier mass balance changes as high-confident climate indicators. The climatic sensitivity of a glacier does not simply depend on regional climate variability but also influenced via large- and mesoscale atmospheric circulation patterns. This study focuses on recent changes in the mass balance using records from three border regions of Europe, and investigates the relationships between the seasonal mass balance components, regional climatic conditions, and distant atmospheric forcing. Since glaciers in different macro-climatological conditions (i.e., mid-latitudes or high-latitudes, dry-continental or maritime regions) may present strongly diverse mass balance characteristics, the three analysed regions were selected from different glacierised macroregions (using the database of the World Glacier Monitoring Service). These regions belong to the Caucasus Mountains (Central Europe macroregion), the Polar Ural (Northern Asia macroregion), and Svalbard (Arctic Islands macroregion). The analysis focuses on winter, summer, and annual mass balance series of eight glaciers. The climatic variables (atmospheric pressure, air temperature, precipitation) and indices of teleconnection patterns (e.g., North Atlantic Oscillation, Pacific Decadal Oscillation) are used from the gridded databases of the University of East Anglia, Climatic Research Unit and the National Oceanic and Atmospheric Administration, National Center for Environmental Prediction. However, the period and length of available mass balance data in the selected regions vary greatly (the first full record is in 1958, Polar Ural; the last is in 2010, Caucasus Mountains), a comparative analysis can be carried out for the period of 1968-1981. Since glaciers from different regions respond to large- and mesoscale climatic forcings differently, and because the mass balance of glaciers within a region often co-vary, our specific objectives are (i) to examine the variability and the integrative climatic signal in the averaged mass balance records of the selected regions; (ii) to analyse the possible coupling between the mass balance and climatic variables, including the dominant patterns of Northern Hemisphere climate variability; and (iii) to compare the main characteristics of the three regions. Furthermore, (iv) a short discussion is given considering the significant decreasing trend of the cumulative annual mass balances in every region under the detected climatic changes in the second half of the 20th century. Preliminary results suggest that the strongest teleconnection links could be between winter mass balance and winter NAO for the Polar Ural (r=0.46, p<0.05), and between annual mass balance and PDO for Svalbard (r=-0.43, p<0.05). Neither seasonal, nor annual mass balance records showed significant correlation with any of the examined circulation indices for the Caucasus.

Effects of multitasking-training on gray matter structure and resting state neural mechanisms

PubMed Central

Takeuchi, Hikaru; Taki, Yasuyuki; Nouchi, Rui; Hashizume, Hiroshi; Sekiguchi, Atsushi; Kotozaki, Yuka; Nakagawa, Seishu; Miyauchi, Carlos Makoto; Sassa, Yuko; Kawashima, Ryuta

2014-01-01

Multitasking (MT) constitutes engaging in two or more cognitive activities at the same time. MT-training improves performance on untrained MT tasks and alters the functional activity of the brain during MT. However, the effects of MT-training on neural mechanisms beyond MT-related functions are not known. We investigated the effects of 4 weeks of MT-training on regional gray matter volume (rGMV) and functional connectivity during rest (resting-FC) in young human adults. MT-training was associated with increased rGMV in three prefrontal cortical regions (left lateral rostral prefrontal cortex (PFC), dorsolateral PFC (DLPFC), and left inferior frontal junction), the left posterior parietal cortex, and the left temporal and lateral occipital areas as well as decreased resting-FC between the right DLPFC and an anatomical cluster around the ventral anterior cingulate cortex (ACC). Our findings suggest that participation in MT-training is as a whole associated with task-irrelevant plasticity (i.e., neural changes are not limited to certain specific task conditions) in regions and the network that are assumed to play roles in MT as well as diverse higher-order cognitive functions. We could not dissociate the effects of each task component and the diverse cognitive processes involved in MT because of the nature of the study, and these remain to be investigated. Hum Brain Mapp 35:3646–3660, 2014. © 2013 The Authors. Human Brain Mapping Published by Wiley Periodicals, Inc. PMID:24343872

Age-Related Mitochondrial DNA Depletion and the Impact on Pancreatic Beta Cell Function

PubMed Central

Nile, Donna L.; Brown, Audrey E.; Kumaheri, Meutia A.; Blair, Helen R.; Heggie, Alison; Miwa, Satomi; Cree, Lynsey M.; Payne, Brendan; Chinnery, Patrick F.; Brown, Louise; Gunn, David A.; Walker, Mark

2014-01-01

Type 2 diabetes is characterised by an age-related decline in insulin secretion. We previously identified a 50% age-related decline in mitochondrial DNA (mtDNA) copy number in isolated human islets. The purpose of this study was to mimic this degree of mtDNA depletion in MIN6 cells to determine whether there is a direct impact on insulin secretion. Transcriptional silencing of mitochondrial transcription factor A, TFAM, decreased mtDNA levels by 40% in MIN6 cells. This level of mtDNA depletion significantly decreased mtDNA gene transcription and translation, resulting in reduced mitochondrial respiratory capacity and ATP production. Glucose-stimulated insulin secretion was impaired following partial mtDNA depletion, but was normalised following treatment with glibenclamide. This confirms that the deficit in the insulin secretory pathway precedes K+ channel closure, indicating that the impact of mtDNA depletion is at the level of mitochondrial respiration. In conclusion, partial mtDNA depletion to a degree comparable to that seen in aged human islets impaired mitochondrial function and directly decreased insulin secretion. Using our model of partial mtDNA depletion following targeted gene silencing of TFAM, we have managed to mimic the degree of mtDNA depletion observed in aged human islets, and have shown how this correlates with impaired insulin secretion. We therefore predict that the age-related mtDNA depletion in human islets is not simply a biomarker of the aging process, but will contribute to the age-related risk of type 2 diabetes. PMID:25532126

Mindfulness training increases cooperative decision making in economic exchanges: Evidence from fMRI.

PubMed

Kirk, Ulrich; Gu, Xiaosi; Sharp, Carla; Hula, Andreas; Fonagy, Peter; Montague, P Read

2016-09-01

Emotions have been shown to exert influences on decision making during economic exchanges. Here we investigate the underlying neural mechanisms of a training regimen which is hypothesized to promote emotional awareness, specifically mindfulness training (MT). We test the hypothesis that MT increases cooperative economic decision making using fMRI in a randomized longitudinal design involving 8weeks of either MT or active control training (CT). We find that MT results in an increased willingness to cooperate indexed by higher acceptance rates to unfair monetary offers in the Ultimatum Game. While controlling for acceptance rates of monetary offers between intervention groups, subjects in the MT and CT groups show differential brain activation patterns. Specifically, a subset of more cooperative MT subjects displays increased activation in the septal region, an area linked to social attachment, which may drive the increased willingness to express cooperative behavior in the MT cohort. Furthermore, MT resulted in attenuated activity in anterior insula compared with the CT group in response to unfair monetary offers post-training, which may suggest that MT enables greater ability to effectively regulate the anterior insula and thereby promotes social cooperation. Finally, functional connectivity analyses show a coupling between the septal region and posterior insula in the MT group, suggesting an integration of interoceptive inputs. Together, these results highlight that MT may be employed in contexts where emotional regulation is required to promote social cooperation. Copyright © 2016 Elsevier Inc. All rights reserved.

The role of metallothionein in oncogenesis and cancer treatment.

PubMed

Bizoń, Anna; Jędryczko, Kinga; Milnerowicz, Halina

2017-02-14

Metallothionein is cysteine-rich low molecular mass protein. The involvement of MT in many physiological and pathophysiological processes such as apoptosis, proliferation, angiogenesis, and the detoxification of heavy metals suggested participation of this protein in carcinogenesis and tumor therapy. Depending on the type of tissue and classification of carcinoma various it was observed relation between MT expression and tumor type, stage, grade, poor prognosis and body resistance to radiotherapy and chemotherapy. MT in tumor cell plays important role in defense mechanism against the effect of radiation by inhibiting the processes that lead to the apoptosis. A number of studies have shown an increased expression of MT in various human tumors of larynx, pancreas, kidney, uterus and breast, whereas lower MT expression was detected in liver tumors. Variable MT expression was detected in case of thyroid, prostate, lung, stomach and central nervous system tumors. Also MT plays crucial role in the cytostatics treatment. MT can bind cis-platinum compounds and removes them from the cells, which may lead to multidrug resistance. However, the same functions of MT protect against the negative effects of chemotherapeutic treatment. It is especially important in case of heart cells. Analysis of MT expression in tumor cells may be useful in choosing method of treatment. It is difficult to determine whether increased expression of MT is only a inducing factor of the development of the carcinogenesis, its malignances and multidrug resistance, or it is a factor inhibiting the induction and development of cancer.

Age-related mitochondrial DNA depletion and the impact on pancreatic Beta cell function.

PubMed

Nile, Donna L; Brown, Audrey E; Kumaheri, Meutia A; Blair, Helen R; Heggie, Alison; Miwa, Satomi; Cree, Lynsey M; Payne, Brendan; Chinnery, Patrick F; Brown, Louise; Gunn, David A; Walker, Mark

2014-01-01

Type 2 diabetes is characterised by an age-related decline in insulin secretion. We previously identified a 50% age-related decline in mitochondrial DNA (mtDNA) copy number in isolated human islets. The purpose of this study was to mimic this degree of mtDNA depletion in MIN6 cells to determine whether there is a direct impact on insulin secretion. Transcriptional silencing of mitochondrial transcription factor A, TFAM, decreased mtDNA levels by 40% in MIN6 cells. This level of mtDNA depletion significantly decreased mtDNA gene transcription and translation, resulting in reduced mitochondrial respiratory capacity and ATP production. Glucose-stimulated insulin secretion was impaired following partial mtDNA depletion, but was normalised following treatment with glibenclamide. This confirms that the deficit in the insulin secretory pathway precedes K+ channel closure, indicating that the impact of mtDNA depletion is at the level of mitochondrial respiration. In conclusion, partial mtDNA depletion to a degree comparable to that seen in aged human islets impaired mitochondrial function and directly decreased insulin secretion. Using our model of partial mtDNA depletion following targeted gene silencing of TFAM, we have managed to mimic the degree of mtDNA depletion observed in aged human islets, and have shown how this correlates with impaired insulin secretion. We therefore predict that the age-related mtDNA depletion in human islets is not simply a biomarker of the aging process, but will contribute to the age-related risk of type 2 diabetes.

Interferon-alpha-induced changes in metallothionein expression in liver biopsies from patients with chronic hepatitis C.

PubMed

Nagamine, Takeaki; Suzuki, Keiji; Kondo, Toshihiko; Nakazato, Kyomi; Kakizaki, Satoru; Takagi, Hitoshi; Nakajima, Katuyuki

2005-08-01

An association between reactive oxygen species and liver damage has been postulated in the course of hepatitis C virus (HCV) infection. Metallothionein (MT), induced by HCV core protein and interferon (IFN), plays a role in scavenging free radicals. MT expression in liver biopsies obtained from 21 patients with chronic HCV infection before and after IFN-alpha therapy was investigated. Changes in Knodell histological activity index (HAI) scores, MT protein levels (immunohistochemistry), MT-I and MT-II messenger (m)RNA expression levels (in situ hybridization) and proliferating cell nuclear antigen (PCNA) labelling index were determined and compared in serial liver specimens. MT staining was clustered around the portal tracts with inflammatory cells and fibrosis. The pattern of MT protein before IFN-alpha therapy was similar in all patients, but was higher in IFN-sustained responders than in nonresponders after IFN-alpha therapy. HAI scores and PCNA labelling indexes were significantly reduced after IFN-alpha therapy. MT-II mRNA expression correlated positively with PCNA index before therapy and with HAI scores after therapy (P<0.05). No correlation was found between MT-I mRNA and HAI scores or PCNA index. The findings indicate that IFN-alpha-induced hepatic MT may participate in the therapeutic effects of IFN-alpha for HCV. In addition, MT-II mRNA expression may be involved in cell proliferation in the livers of patients with chronic HCV infection.

African-American mitochondrial DNAs often match mtDNAs found in multiple African ethnic groups

PubMed Central

Ely, Bert; Wilson, Jamie Lee; Jackson, Fatimah; Jackson, Bruce A

2006-01-01

Background Mitochondrial DNA (mtDNA) haplotypes have become popular tools for tracing maternal ancestry, and several companies offer this service to the general public. Numerous studies have demonstrated that human mtDNA haplotypes can be used with confidence to identify the continent where the haplotype originated. Ideally, mtDNA haplotypes could also be used to identify a particular country or ethnic group from which the maternal ancestor emanated. However, the geographic distribution of mtDNA haplotypes is greatly influenced by the movement of both individuals and population groups. Consequently, common mtDNA haplotypes are shared among multiple ethnic groups. We have studied the distribution of mtDNA haplotypes among West African ethnic groups to determine how often mtDNA haplotypes can be used to reconnect Americans of African descent to a country or ethnic group of a maternal African ancestor. The nucleotide sequence of the mtDNA hypervariable segment I (HVS-I) usually provides sufficient information to assign a particular mtDNA to the proper haplogroup, and it contains most of the variation that is available to distinguish a particular mtDNA haplotype from closely related haplotypes. In this study, samples of general African-American and specific Gullah/Geechee HVS-I haplotypes were compared with two databases of HVS-I haplotypes from sub-Saharan Africa, and the incidence of perfect matches recorded for each sample. Results When two independent African-American samples were analyzed, more than half of the sampled HVS-I mtDNA haplotypes exactly matched common haplotypes that were shared among multiple African ethnic groups. Another 40% did not match any sequence in the database, and fewer than 10% were an exact match to a sequence from a single African ethnic group. Differences in the regional distribution of haplotypes were observed in the African database, and the African-American haplotypes were more likely to match haplotypes found in ethnic groups from West or West Central Africa than those found in eastern or southern Africa. Fewer than 14% of the African-American mtDNA sequences matched sequences from only West Africa or only West Central Africa. Conclusion Our database of sub-Saharan mtDNA sequences includes the most common haplotypes that are shared among ethnic groups from multiple regions of Africa. These common haplotypes have been found in half of all sub-Saharan Africans. More than 60% of the remaining haplotypes differ from the common haplotypes at a single nucleotide position in the HVS-I region, and they are likely to occur at varying frequencies within sub-Saharan Africa. However, the finding that 40% of the African-American mtDNAs analyzed had no match in the database indicates that only a small fraction of the total number of African haplotypes has been identified. In addition, the finding that fewer than 10% of African-American mtDNAs matched mtDNA sequences from a single African region suggests that few African Americans might be able to trace their mtDNA lineages to a particular region of Africa, and even fewer will be able to trace their mtDNA to a single ethnic group. However, no firm conclusions should be made until a much larger database is available. It is clear, however, that when identical mtDNA haplotypes are shared among many ethnic groups from different parts of Africa, it is impossible to determine which single ethnic group was the source of a particular maternal ancestor based on the mtDNA sequence. PMID:17038170

The Complete Mitochondrial Genome of Gossypium hirsutum and Evolutionary Analysis of Higher Plant Mitochondrial Genomes

PubMed Central

Su, Aiguo; Geng, Jianing; Grover, Corrinne E.; Hu, Songnian; Hua, Jinping

2013-01-01

Background Mitochondria are the main manufacturers of cellular ATP in eukaryotes. The plant mitochondrial genome contains large number of foreign DNA and repeated sequences undergone frequently intramolecular recombination. Upland Cotton (Gossypium hirsutum L.) is one of the main natural fiber crops and also an important oil-producing plant in the world. Sequencing of the cotton mitochondrial (mt) genome could be helpful for the evolution research of plant mt genomes. Methodology/Principal Findings We utilized 454 technology for sequencing and combined with Fosmid library of the Gossypium hirsutum mt genome screening and positive clones sequencing and conducted a series of evolutionary analysis on Cycas taitungensis and 24 angiosperms mt genomes. After data assembling and contigs joining, the complete mitochondrial genome sequence of G. hirsutum was obtained. The completed G.hirsutum mt genome is 621,884 bp in length, and contained 68 genes, including 35 protein genes, four rRNA genes and 29 tRNA genes. Five gene clusters are found conserved in all plant mt genomes; one and four clusters are specifically conserved in monocots and dicots, respectively. Homologous sequences are distributed along the plant mt genomes and species closely related share the most homologous sequences. For species that have both mt and chloroplast genome sequences available, we checked the location of cp-like migration and found several fragments closely linked with mitochondrial genes. Conclusion The G. hirsutum mt genome possesses most of the common characters of higher plant mt genomes. The existence of syntenic gene clusters, as well as the conservation of some intergenic sequences and genic content among the plant mt genomes suggest that evolution of mt genomes is consistent with plant taxonomy but independent among different species. PMID:23940520

The complete mitochondrial genome of Gossypium hirsutum and evolutionary analysis of higher plant mitochondrial genomes.

PubMed

Liu, Guozheng; Cao, Dandan; Li, Shuangshuang; Su, Aiguo; Geng, Jianing; Grover, Corrinne E; Hu, Songnian; Hua, Jinping

2013-01-01

Mitochondria are the main manufacturers of cellular ATP in eukaryotes. The plant mitochondrial genome contains large number of foreign DNA and repeated sequences undergone frequently intramolecular recombination. Upland Cotton (Gossypium hirsutum L.) is one of the main natural fiber crops and also an important oil-producing plant in the world. Sequencing of the cotton mitochondrial (mt) genome could be helpful for the evolution research of plant mt genomes. We utilized 454 technology for sequencing and combined with Fosmid library of the Gossypium hirsutum mt genome screening and positive clones sequencing and conducted a series of evolutionary analysis on Cycas taitungensis and 24 angiosperms mt genomes. After data assembling and contigs joining, the complete mitochondrial genome sequence of G. hirsutum was obtained. The completed G.hirsutum mt genome is 621,884 bp in length, and contained 68 genes, including 35 protein genes, four rRNA genes and 29 tRNA genes. Five gene clusters are found conserved in all plant mt genomes; one and four clusters are specifically conserved in monocots and dicots, respectively. Homologous sequences are distributed along the plant mt genomes and species closely related share the most homologous sequences. For species that have both mt and chloroplast genome sequences available, we checked the location of cp-like migration and found several fragments closely linked with mitochondrial genes. The G. hirsutum mt genome possesses most of the common characters of higher plant mt genomes. The existence of syntenic gene clusters, as well as the conservation of some intergenic sequences and genic content among the plant mt genomes suggest that evolution of mt genomes is consistent with plant taxonomy but independent among different species.

MEMBRANE-TYPE 1 MATRIX METALLOPROTEINASE DOWNREGULATES FIBROBLAST GROWTH FACTOR-2 BINDING TO THE CELL SURFACE AND INTRACELLULAR SIGNALING

PubMed Central

Tassone, Evelyne; Valacca, Cristina; Mignatti, Paolo

2014-01-01

Membrane-type 1 matrix metalloproteinase (MT1-MMP, MMP-14), a transmembrane proteinase with an extracellular catalytic domain and a short cytoplasmic tail, degrades extracellular matrix components and controls diverse cell functions through proteolytic and non-proteolytic interactions with extracellular, intracellular and transmembrane proteins. Here we show that in tumor cells MT1-MMP downregulates fibroblast growth factor-2 (FGF-2) signaling by reducing the amount of FGF-2 bound to the cell surface with high and low affinity. FGF-2 induces weaker activation of ERK1/2 MAP kinase in MT1-MMP expressing cells than in cells devoid of MT1-MMP. This effect is abolished in cells that express proteolytically inactive MT1-MMP but persists in cells expressing MT1-MMP mutants devoid of hemopexin-like or cytoplasmic domain, showing that FGF-2 signaling is downregulated by MT1-MMP proteolytic activity. MT1-MMP expression results in downregulation of FGFR-1 and -4, and in decreased amount of cell surface-associated FGF-2. In addition, MT1-MMP strongly reduces the amount of FGF-2 bound to the cell surface with low affinity. Because FGF-2 association with low-affinity binding sites is a prerequisite for binding to its high-affinity receptors, downregulation of low-affinity binding to the cell surface results in decreased FGF-2 signaling. Consistent with this conclusion, FGF-2 induction of tumor cell migration and invasion in vitro is stronger in cells devoid of MT1-MMP than in MT1-MMP expressing cells. Thus, MT1-MMP controls FGF-2 signaling by a proteolytic mechanism that decreases the cell’s biological response to FGF-2. PMID:24986796

Significant treatment effect of adjunct music therapy to standard treatment on the positive, negative, and mood symptoms of schizophrenic patients: a meta-analysis.

PubMed

Tseng, Ping-Tao; Chen, Yen-Wen; Lin, Pao-Yen; Tu, Kun-Yu; Wang, Hung-Yu; Cheng, Yu-Shian; Chang, Yi-Chung; Chang, Chih-Hua; Chung, Weilun; Wu, Ching-Kuan

2016-01-26

Music therapy (MT) has been used as adjunct therapy for schizophrenia for decades. However, its role is still inconclusive. A recent meta-analysis demonstrated that MT for schizophrenic patients only significantly benefits negative symptoms and mood symptoms rather than positive symptoms. In addition, the association between specific characteristics of MT and the treatment effect remains unclear. The aim of this study was to update the published data and to explore the role of music therapy in adjunct treatment in schizophrenia with a thorough meta-analysis. We compared the treatment effect in schizophrenic patients with standard treatment who did and did not receive adjunct MT through a meta-analysis, and investigated the clinical characteristics of MT through meta-regression. The main finding was that the treatment effect was significantly better in the patients who received adjunct MT than in those who did not, in negative symptoms, mood symptoms, and also positive symptoms (all p < 0.05). This significance did not change after dividing the patients into subgroups of different total duration of MT, amounts of sessions, or frequency of MT. Besides, the treatment effect on the general symptoms was significantly positively associated with the whole duration of illness, indicating that MT would be beneficial for schizophrenic patients with a chronic course. Our meta-analysis highlights a significantly better treatment effect in schizophrenic patients who received MT than in those who did not, especially in those with a chronic course, regardless of the duration, frequency, or amounts of sessions of MT. These findings provide evidence that clinicians should apply MT for schizophrenic patients to alleviate disease severity.

Molecular characterization and expression profile of the melatonin receptor MT1 in the ovary of Tianzhu white yak (Bos grunniens).

PubMed

Hu, Jun Jie; Zhang, Xiao Yu; Zhang, Yong; Zhao, Xing Xu; Li, Fa Di; Tao, Jin Zhong

2017-02-01

Melatonin plays crucial roles in a wide range of ovarian physiological functions via the melatonin receptors (MRs). Structure and function of MRs have been well studied in sheep, cattle, and humans, but little information exists on the genetic characterization and function of these receptors in the ovary of the white yak. In the present study, the melatonin receptor MT1 was cloned by RT-PCR in the ovary of white yak; the MT1 cDNA fragment obtained (843bp) comprised an open reading frame (827bp) encoding a protein containing 275 residues, characterized by seven transmembrane regions and an NRY motif, two distinct amino acid replacements were found. The white yak MT1 had a 83.9-98.6% protein sequence identity with that of nine other mammals. Using RT-PCR, the expression levels of MT1, MT2, and LHR in the ovary of pregnant and non-pregnant white yaks were compared, revealing higher levels of all genes in pregnant yaks: 3.83-fold increase for MT1 (P<0.05), 1.39-fold increase for MT2, and 15.32-fold increase for LHR (P<0.05). The distribution of MT1 in yak ovaries was observed using immunohistochemistry on paraffin embedded ovarian sections: MT1 was mainly present on primordial follicles (PF), granulosa cells (GCs), oocytes, and corpus luteum (CL) cells; MT1 expression showed an increasing tendency from PF to GCs to oocytes and to large CL cells. It is suggested that melatonin and MT1 are associated with the corpus luteum function of pregnancy maintenance and follicular development during oocyte maturation in the white yak. Copyright © 2015 Elsevier Inc. All rights reserved.

MT1-MMP is a crucial promotor of synovial invasion in human rheumatoid arthritis

PubMed Central

Miller, Mary-Clare; Manning, Hugh B.; Jain, Abhilash; Troeberg, Linda; Dudhia, Jayesh; Essex, David; Sandison, Ann; Seiki, Motoharu; Nanchahal, Jagdeep; Nagase, Hideaki; Itoh, Yoshifumi

2010-01-01

Objective A hallmark of rheumatoid arthritis (RA) is invasion of the synovial pannus into cartilage and this step requires degradation of the collagen matrix. The aim of this study was to explore the role of one of the collagen-degrading matrix metalloproteinases (MMPs), membrane-type 1 MMP (MT1-MMP), in synovial pannus invasiveness. Methods Expression and localization of MT1-MMP in human RA pannus were investigated by Western blot analysis of primary synovial cells and immunohistochemistry of RA joints specimens. The functional role of MT1-MMP was analyzed by 3D collagen invasion assays and a cartilage invasion assay in the presence or absence of tissue inhibitor of metalloproteinase (TIMP)-1, TIMP-2, or GM6001. The effect of adenoviral expression of a dominant negative MT1-MMP construct lacking a catalytic domain was also examined. Results MT1-MMP was highly expressed at the pannus-cartilage junction of RA joints. Freshly isolated rheumatoid synovial tissues and isolated RA synovial fibroblasts invaded into a 3D collagen matrix in an MT1-MMP-dependent manner. Invasion was blocked by TIMP-2 and GM6001, but not by TIMP-1. It was also inhibited by the over-expression of a dominant negative MT1-MMP which inhibits collagenolytic activity and proMMP-2 activation by MT1-MMP on the cell surface. Synovial fibroblasts also invaded into cartilage in an MT1-MMP-dependent manner. This process was further enhanced by removing aggrecan from the cartilage matrix. Conclusion MT1-MMP is an essential collagen-degrading proteinase during pannus invasion in human RA. Specific inhibition of MT1-MMP-dependent invasion may form a novel therapeutic strategy for RA. PMID:19248098

Influence of montmorillonites exchange capacity on the basal spacing of cation–anion organo-montmorillonites

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sanqin, Wu; Zepeng, Zhang, E-mail: unite508@163.com; Yunhua, Wang

Graphical abstract: This picture shows the distribution of organic modifier (CTAB and SDS) in Mt interlayer and the basal spacing changes of Mt modified by CTAB and SDS. Organic modifier molecule in Mt interlayer is more and more orderly. The basal spacing of Mt is from 1.5 nm to 5 nm as modifier added. - Highlights: • The d{sub 001} of Ca-Mt, R-Na-Mt, Na-Mt modified by CTAB and SDS can reach 5 nm. • It is easier to get cation–anion OMt with greater d{sub 001} if CEC is lower. • The organic molecules distribution in cation–anion OMt was analyzed. •more » The influence mechanism of Ca-Mt CEC on the d{sub 001} was discussed. - Abstract: With cationic and anionic surfactants cetyltrimethylammonium bromide (CTAB) and sodium dodecylsulfonate (SDS) as modifiers, Ca-montmorillonites (Ca-Mt), artificial Na-montmorillonites (R-Na-Mt) and natural Na-montmorillonites (Na-Mt) with different cation exchange capacity (CEC) were modified by solution intercalation method, respectively. Then cation–anion organo-montmorillonites (OMt) were prepared. The influence of CEC on the basal spacing of cation–anion OMt and the influence mechanism were discussed by X-ray diffraction (XRD) and zeta potential testing. The results indicate that the basal spacing of cation–anion OMt is related to CEC. For the same type montmorillonites, the basal spacing of cation–anion OMt decreases with the increase of CEC and it is easier to get cation–anion OMt with greater basal spacing when CEC is lower. Moreover, the CEC of Na-Mt has the greatest influence on the basal spacing of cation–anion OMt.« less

Re-examining overlap between tactile and visual motion responses within hMT+ and STS

PubMed Central

Jiang, Fang; Beauchamp, Michael S.; Fine, Ione

2015-01-01

Here we examine overlap between tactile and visual motion BOLD responses within the human MT+ complex. Although several studies have reported tactile responses overlapping with hMT+, many used group average analyses, leaving it unclear whether these responses were restricted to sub-regions of hMT+. Moreover, previous studies either employed a tactile task or passive stimulation, leaving it unclear whether or not tactile responses in hMT+ are simply the consequence of visual imagery. Here we carried out a replication of one of the classic papers finding tactile responses in hMT+ (Hagen et al. 2002). We mapped MT and MST in individual subjects using visual field localizers. We then examined responses to tactile motion on the arm, either presented passively or in the presence of a visual task performed at fixation designed to minimize visualization of the concurrent tactile stimulation. To our surprise, without a visual task, we found only weak tactile motion responses in MT (6% of voxels showing tactile responses) and MST (2% of voxels). With an unrelated visual task designed to withdraw attention from the tactile modality, responses in MST reduced to almost nothing (<1% regions). Consistent with previous results, we did observe tactile responses in STS regions superior and anterior to hMT+. Despite the lack of individual overlap, group averaged responses produced strong spurious overlap between tactile and visual motion responses within hMT+ that resembled those observed in previous studies. The weak nature of tactile responses in hMT+ (and their abolition by withdrawal of attention) suggests that hMT+ may not serve as a supramodal motion processing module. PMID:26123373

Increased mitochondrial DNA deletions and copy number in transfusion-dependent thalassemia

PubMed Central

Calloway, Cassandra

2016-01-01

BACKGROUND. Iron overload is the primary cause of morbidity in transfusion-dependent thalassemia. Increase in iron causes mitochondrial dysfunction under experimental conditions, but the occurrence and significance of mitochondrial damage is not understood in patients with thalassemia. METHODS. Mitochondrial DNA (mtDNA) to nuclear DNA copy number (Mt/N) and frequency of the common 4977-bp mitochondrial deletion (ΔmtDNA4977) were quantified using a quantitative PCR assay on whole blood samples from 38 subjects with thalassemia who were receiving regular transfusions. RESULTS. Compared with healthy controls, Mt/N and ΔmtDNA4977 frequency were elevated in thalassemia (P = 0.038 and P < 0.001, respectively). ΔmtDNA4977 was increased in the presence of either liver iron concentration > 15 mg/g dry-weight or splenectomy, with the highest levels observed in subjects who had both risk factors (P = 0.003). Myocardial iron (MRI T2* < 20 ms) was present in 0%, 22%, and 46% of subjects with ΔmtDNA4977 frequency < 20, 20–40, and > 40/1 × 107 mtDNA, respectively (P = 0.025). Subjects with Mt/N values below the group median had significantly lower Matsuda insulin sensitivity index (5.76 ± 0.53) compared with the high Mt/N group (9.11 ± 0.95, P = 0.008). CONCLUSION. Individuals with transfusion-dependent thalassemia demonstrate age-related increase in mtDNA damage in leukocytes. These changes are markedly amplified by splenectomy and are associated with extrahepatic iron deposition. Elevated mtDNA damage in blood cells may predict the risk of iron-associated organ damage in thalassemia. FUNDING. This project was supported by Children’s Hospital & Research Center Oakland Institutional Research Award and by the National Center for Advancing Translational Sciences, NIH, through UCSF-CTSI grant UL1 TR000004. PMID:27583305

Requirement of the Saccharomyces cerevisiae APN1 Gene for the Repair of Mitochondrial DNA Alkylation Damage

PubMed Central

Acevedo-Torres, Karina; Fonseca-Williams, Sharon; Ayala-Torres, Sylvette; Torres-Ramos, Carlos A.

2010-01-01

The Saccharomyces cerevisiae APN1 gene that participates in base excision repair has been localized both in the nucleus and the mitochondria. APN1 deficient cells (apn1Δ) show increased mutation frequencies in mitochondrial DNA (mtDNA) suggesting that APN1 is also important for mtDNA stability. To understand APN1-dependent mtDNA repair processes we studied the formation and repair of mtDNA lesions in cells exposed to methyl methanesulfonate (MMS). We show that MMS induces mtDNA damage in a dose-dependent fashion and that deletion of the APN1 gene enhances the susceptibility of mtDNA to MMS. Repair kinetic experiments demonstrate that in wild-type cells (WT) it takes 4 hr to repair the damage induced by 0.1% MMS, whereas in the apn1Δ strain there is a lag in mtDNA repair that results in significant differences in the repair capacity between the two yeast strains. Analysis of lesions in nuclear DNA (nDNA) after treatment with 0.1% MMS shows a significant difference in the amount of nDNA lesions between WT and apn1Δ cells. Interestingly, comparisons between nDNA and mtDNA damage show that nDNA is more sensitive to the effects of MMS treatment. However, both strains are able to repair the nDNA lesions, contrary to mtDNA repair, which is compromised in the apn1Δ mutant strain. Therefore, although nDNA is more sensitive than mtDNA to the effects of MMS, deletion of APN1 has a stronger phenotype in mtDNA repair than in nDNA. These results highlight the prominent role of APN1 in the repair of environmentally induced mtDNA damage. PMID:19197988

The human mitochondrial single-stranded DNA-binding protein displays distinct kinetics and thermodynamics of DNA binding and exchange

PubMed Central

Qian, Yufeng; Johnson, Kenneth A.

2017-01-01

The human mitochondrial ssDNA-binding protein (mtSSB) is a homotetrameric protein, involved in mtDNA replication and maintenance. Although mtSSB is structurally similar to SSB from Escherichia coli (EcoSSB), it lacks the C-terminal disordered domain, and little is known about the biophysics of mtSSB–ssDNA interactions. Here, we characterized the kinetics and thermodynamics of mtSSB binding to ssDNA by equilibrium titrations and stopped-flow kinetic measurements. We show that the mtSSB tetramer can bind to ssDNA in two distinct binding modes: (SSB)30 and (SSB)60, defined by DNA binding site sizes of 30 and 60 nucleotides, respectively. We found that the binding mode is modulated by magnesium ion and NaCl concentration, but unlike EcoSSB, the mtSSB does not show negative intersubunit cooperativity. Global fitting of both the equilibrium and kinetic data afforded estimates for the rate and equilibrium constants governing the formation of (SSB)60 and (SSB)30 complexes and for the transitions between the two binding modes. We found that the mtSSB tetramer binds to ssDNA with a rate constant near the diffusion limit (2 × 109 m−1 s−1) and that longer DNA (≥60 nucleotides) rapidly wraps around all four monomers, as revealed by FRET assays. We also show that the mtSSB tetramer can directly transfer from one ssDNA molecule to another via an intermediate with two DNA molecules bound to the mtSSB. In conclusion, our results indicate that human mtSSB shares many physicochemical properties with EcoSSB and that the differences may be explained by the lack of an acidic, disordered C-terminal tail in human mtSSB protein. PMID:28615444

Accurate quantitation of circulating cell-free mitochondrial DNA in plasma by droplet digital PCR.

PubMed

Ye, Wei; Tang, Xiaojun; Liu, Chu; Wen, Chaowei; Li, Wei; Lyu, Jianxin

2017-04-01

To establish a method for accurate quantitation of circulating cell-free mitochondrial DNA (ccf-mtDNA) in plasma by droplet digital PCR (ddPCR), we designed a ddPCR method to determine the copy number of ccf-mtDNA by amplifying mitochondrial ND1 (MT-ND1). To evaluate the sensitivity and specificity of the method, a recombinant pMD18-T plasmid containing MT-ND1 sequences and mtDNA-deleted (ρ 0 ) HeLa cells were used, respectively. Subsequently, different plasma samples were prepared for ddPCR to evaluate the feasibility of detecting plasma ccf-mtDNA. In the results, the ddPCR method showed high sensitivity and specificity. When the DNA was extracted from plasma prior to ddPCR, the ccf-mtDNA copy number was higher than that measured without extraction. This difference was not due to a PCR inhibitor, such as EDTA-Na 2 , an anti-coagulant in plasma, because standard EDTA-Na 2 concentration (5 mM) did not significantly inhibit ddPCR reactions. The difference might be attributable to plasma exosomal mtDNA, which was 4.21 ± 0.38 copies/μL of plasma, accounting for ∼19% of plasma ccf-mtDNA. Therefore, ddPCR can quickly and reliably detect ccf-mtDNA from plasma with a prior DNA extraction step, providing for a more accurate detection of ccf-mtDNA. The direct use of plasma as a template in ddPCR is suitable for the detection of exogenous cell-free nucleic acids within plasma, but not of nucleic acids that have a vesicle-associated form, such as exosomal mtDNA. Graphical Abstract Designs of the present work. *: Module 1, #: Module 2, &: Module 3.

A somatic T15091C mutation in the Cytb gene of mouse mitochondrial DNA dominantly induces respiration defects.

PubMed

Hayashi, Chisato; Takibuchi, Gaku; Shimizu, Akinori; Mito, Takayuki; Ishikawa, Kaori; Nakada, Kazuto; Hayashi, Jun-Ichi

2015-08-07

Our previous studies provided evidence that mammalian mitochondrial DNA (mtDNA) mutations that cause mitochondrial respiration defects behave in a recessive manner, because the induction of respiration defects could be prevented with the help of a small proportion (10%-20%) of mtDNA without the mutations. However, subsequent studies found the induction of respiration defects by the accelerated accumulation of a small proportion of mtDNA with various somatic mutations, indicating the presence of mtDNA mutations that behave in a dominant manner. Here, to provide the evidence for the presence of dominant mutations in mtDNA, we used mouse lung carcinoma P29 cells and examined whether some mtDNA molecules possess somatic mutations that dominantly induce respiration defects. Cloning and sequence analysis of 40-48 mtDNA molecules from P29 cells was carried out to screen for somatic mutations in protein-coding genes, because mutations in these genes could dominantly regulate respiration defects by formation of abnormal polypeptides. We found 108 missense mutations existing in one or more of 40-48 mtDNA molecules. Of these missense mutations, a T15091C mutation in the Cytb gene was expected to be pathogenic due to the presence of its orthologous mutation in mtDNA from a patient with cardiomyopathy. After isolation of many subclones from parental P29 cells, we obtained subclones with various proportions of T15091C mtDNA, and showed that the respiration defects were induced in a subclone with only 49% T15091C mtDNA. Because the induction of respiration defects could not be prevented with the help of the remaining 51% mtDNA without the T15091C mutation, the results indicate that the T15091C mutation in mtDNA dominantly induced the respiration defects. Copyright © 2015 Elsevier Inc. All rights reserved.

Resolving the tips of the tree of life: How much mitochondrialdata doe we need?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bonett, Ronald M.; Macey, J. Robert; Boore, Jeffrey L.

2005-04-29

Mitochondrial (mt) DNA sequences are used extensively to reconstruct evolutionary relationships among recently diverged animals,and have constituted the most widely used markers for species- and generic-level relationships for the last decade or more. However, most studies to date have employed relatively small portions of the mt-genome. In contrast, complete mt-genomes primarily have been used to investigate deep divergences, including several studies of the amount of mt sequence necessary to recover ancient relationships. We sequenced and analyzed 24 complete mt-genomes from a group of salamander species exhibiting divergences typical of those in many species-level studies. We present the first comprehensive investigationmore » of the amount of mt sequence data necessary to consistently recover the mt-genome tree at this level, using parsimony and Bayesian methods. Both methods of phylogenetic analysis revealed extremely similar results. A surprising number of well supported, yet conflicting, relationships were found in trees based on fragments less than {approx}2000 nucleotides (nt), typical of the vast majority of the thousands of mt-based studies published to date. Large amounts of data (11,500+ nt) were necessary to consistently recover the whole mt-genome tree. Some relationships consistently were recovered with fragments of all sizes, but many nodes required the majority of the mt-genome to stabilize, particularly those associated with short internal branches. Although moderate amounts of data (2000-3000 nt) were adequate to recover mt-based relationships for which most nodes were congruent with the whole mt-genome tree, many thousands of nucleotides were necessary to resolve rapid bursts of evolution. Recent advances in genomics are making collection of large amounts of sequence data highly feasible, and our results provide the basis for comparative studies of other closely related groups to optimize mt sequence sampling and phylogenetic resolution at the ''tips'' of the Tree of Life.« less

LncRNA MT1JP functions as a ceRNA in regulating FBXW7 through competitively binding to miR-92a-3p in gastric cancer.

PubMed

Zhang, Gang; Li, Shuwei; Lu, Jiafei; Ge, Yuqiu; Wang, Qiaoyan; Ma, Gaoxiang; Zhao, Qinghong; Wu, Dongdong; Gong, Weida; Du, Mulong; Chu, Haiyan; Wang, Meilin; Zhang, Aihua; Zhang, Zhengdong

2018-05-02

Emerging evidence has shown that dysregulation function of long non-coding RNAs (lncRNAs) implicated in gastric cancer (GC). However, the role of the differentially expressed lncRNAs in GC has not fully explained. LncRNA expression profiles were determined by lncRNA microarray in five pairs of normal and GC tissues, further validated in another 75 paired tissues by quantitative real-time PCR (qRT-PCR). Overexpression of lncRNA MT1JP was conducted to assess the effect of MT1JP in vitro and in vivo. The biological functions were demonstrated by luciferase reporter assay, western blotting and rescue experiments. LncRNA MT1JP was significantly lower in GC tissues than adjacent normal tissues, and higher MT1JP was remarkably related to lymph node metastasis and advance stage. Besides, GC patients with higher MT1JP expression had a well survival. Functionally, overexpression of lncRNA MT1JP inhibited cell proliferation, migration, invasion and promoted cell apoptosis in vitro, and inhibited tumor growth and metastasis in vivo. Functional analysis showed that lncRNA MT1JP regulated FBXW7 expression by competitively binding to miR-92a-3p. MiR-92a-3p and down-regulated FBXW7 reversed cell phenotypes caused by lncRNA MT1JP by rescue analysis. MT1JP, a down-regulated lncRNA in GC, was associated with malignant tumor phenotypes and survival of GC. MT1JP regulated the progression of GC by functioning as a competing endogenous RNA (ceRNA) to competitively bind to miR-92a-3p and regulate FBXW7 expression. Our study provided new insight into the post-transcriptional regulation mechanism of lncRNA MT1JP, and suggested that MT1JP may act as a potential therapeutic target and prognosis biomarker for GC.

Nitrosylation Mechanisms of Mycobacterium tuberculosis and Campylobacter jejuni Truncated Hemoglobins N, O, and P

PubMed Central

Ascenzi, Paolo; di Masi, Alessandra; Tundo, Grazia R.; Pesce, Alessandra; Visca, Paolo; Coletta, Massimo

2014-01-01

Truncated hemoglobins (trHbs) are widely distributed in bacteria and plants and have been found in some unicellular eukaryotes. Phylogenetic analysis based on protein sequences shows that trHbs branch into three groups, designated N (or I), O (or II), and P (or III). Most trHbs are involved in the O2/NO chemistry and/or oxidation/reduction function, permitting the survival of the microorganism in the host. Here, a detailed comparative analysis of kinetics and/or thermodynamics of (i) ferrous Mycobacterium tubertulosis trHbs N and O (Mt-trHbN and Mt-trHbO, respectively), and Campylobacter jejuni trHb (Cj-trHbP) nitrosylation, (ii) nitrite-mediated nitrosylation of ferrous Mt-trHbN, Mt-trHbO, and Cj-trHbP, and (iii) NO-based reductive nitrosylation of ferric Mt-trHbN, Mt-trHbO, and Cj-trHbP is reported. Ferrous and ferric Mt-trHbN and Cj-trHbP display a very high reactivity towards NO; however, the conversion of nitrite to NO is facilitated primarily by ferrous Mt-trHbN. Values of kinetic and/or thermodynamic parameters reflect specific trHb structural features, such as the ligand diffusion pathways to/from the heme, the heme distal pocket structure and polarity, and the ligand stabilization mechanisms. In particular, the high reactivity of Mt-trHbN and Cj-trHbP reflects the great ligand accessibility to the heme center by two protein matrix tunnels and the E7-path, respectively, and the penta-coordination of the heme-Fe atom. In contrast, the heme-Fe atom of Mt-trHbO the ligand accessibility to the heme center of Mt-trHbO needs large conformational readjustments, thus limiting the heme-based reactivity. These results agree with different roles of Mt-trHbN, Mt-trHbO, and Cj-trHbP in vivo. PMID:25051055

Cadium pathways during gestation and lactation in control vs. metallothionein 1,2-knockout mice.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brako, E. E.; Wilson, A. K.; Jonah, M. M.

2003-01-01

Effects of metallothionein (MT) on cadmium absorption and transfer pathways during gestation and lactation in mice were investigated. Female 129/SvJ metallothionein-knockout (MT1,2KO) and metallothionein-normal (MTN) mice received drinking water containing trace amounts of {sup 109}CdCl{sub 2} (0.15 ng Cd/ml; 0.074 {mu}Ci {sup 109}Cd/ml). {sup 109}Cd and MT in maternal, fetal, and pup tissues were measured on gestation days 7, 14, and 17 and lactation day 11. In dams, MT influenced both the amount of {sup 109}Cd transferred from intestine into body (two- to three-fold higher in MT1,2KO than MTN dams) and tissue-specific {sup 109}Cd distribution (higher liver/kidney ratio in MT1,2KOmore » dams). Placental {sup 109}Cd concentrations in MT1,2KO dams were three- and seven-fold higher on gestation days 14 and 17, respectively, than in MTN dams. Fetal {sup 109}Cd levels were low in both mouse types, but at least 10-fold lower in MTN fetuses. MT had no effect on the amount of {sup 109}Cd transferred to pups via milk; furthermore, 85--90% of total pup {sup 109}Cd was recovered in gastrointestinal tracts of both types, despite high duodenal MT only in MTN pups. A relatively large percentage of milk-derived intestinal {sup 109}Cd was transferred to other pup tissues in both MT1,2KO and MTN pups (14 and 10%, respectively). These results demonstrate that specific sequestration of cadmium by both maternal and neonatal intestinal tract does not require MT. Although MT decreased oral cadmium transfer from intestine to body tissues at low cadmium exposure levels, MT did not play a major role in restricting transfer of cadmium from dam to fetus via placenta and to neonate via milk.« less

Effects of environmental salinity and 17alpha-methyltestosterone on growth and oxygen consumption in the tilapia, Oreochromis mossambicus.

PubMed

Sparks, Russell T; Shepherd, Brian S; Ron, Benny; Harold Richman, N; Riley, Larry G; Iwama, George K; Hirano, Tetsuya; Gordon Grau, E

2003-12-01

Effects of environmental salinity and 17alpha-methyltestosterone (MT) on growth and oxygen consumption were examined in the tilapia, Oreochromis mossambicus. Yolk-sac fry were collected from brood stock in fresh water (FW). After yolk-sac absorption, they were assigned randomly to one of four groups: FW, MT treatment in FW, seawater (SW) and MT treatment in SW. All treatment groups were fed to satiation three times daily. The fish reared in SW (both control and MT-treated groups) grew significantly larger than either group in FW from day 43 throughout the experiment (195 days). The fish fed with MT added to their feed grew significantly larger than their respective controls from day 85 in FW and in SW until the end of the experiment. The routine metabolic rate (RMR) was determined monthly from month 2 (day 62) to month 5 (day 155). A significant negative correlation was seen between RMR and body mass in all treatment groups. Among fish of the same age, the SW-reared tilapia had significantly lower RMRs than the FW-reared fish. The MT-treated fish in SW showed significantly lower RMRs than the SW control group at months 3-5, whereas MT treatment in FW significantly increased the RMR at month 3. Comparison of regression lines between RMR and body mass indicates that MT treatment in FW caused a significant increase in oxygen consumption at a given mass of the fish, whereas MT treatment was without effect on RMR in SW-reared fish. These results clearly indicate that SW-rearing and MT treatment accelerate growth of tilapia, and that RMR decreases as fish size increased. It is also likely that the increased RMR and growth in MT-treated tilapia in FW may be due to the metabolic actions of MT, although the reason for the absence of MT treatment in SW is unclear.

Protective effects of melatonin on ischemia-reperfusion induced myocardial damage and hemodynamic recovery in rats.

PubMed

Liu, L-F; Qin, Q; Qian, Z-H; Shi, M; Deng, Q-C; Zhu, W-P; Zhang, H; Tao, X-M; Liu, Y

2014-01-01

To investigate the mechanism of melatonin (MT) protection of adult rate myocardial ischemia-reperfusion injury and its influence on rat's hemodynamic recovery. 48 rats were randomly divided into MT group (n=36) and the control group (n=12), MT group was divided into three sub-groups according to different dosages: Group I (n=12) was administered with 2.5 mg/kg MT; Group II (n=12) was administered with 5 mg/kg MT; Group III (n=12) was administered with 10 mg/kg MT. The electrocardiogram of four groups was observed with the left coronary artery blocked for 10min at first and then reperfused for 15min. Hemodynamic evolving was observed and changes in energy metabolism of rat myocardium were monitored. TUNEL and immunohistochemistry were applied to detect the cell apoptosis index, protein expression of Bcl-2 and Bax. LVDP (left ventricular developed pressure) and ± dp/dt in MT group presented better recovery at various time points than the control group. Among them, Group III had the optimal recovery degree (p < 0.05). After MT administration, ATP content in myocardial cells in MT group was significantly higher than the control group. Compared with the control group, the concentration of mitochondrial MDA and Ca2+ in myocardial cells in MT group showed a downward trend. But its GSH concentration was significantly higher than the control group (p < 0.05). The improvement degree of ATP, MDA, GSH and Ca2+ concentration in Group II over-performed Group I (p < 0.05). MT-intervened myocardial apoptosis index (AI) and Bax positive expression index declined while Bcl-2 positive expression index increased (p < 0.01). MT effectively inhibited myocardial apoptosis during the myocardial ischemia-reperfusion of rats, protected the structural integrity of mitochondria in myocardial cells, promoted ATP synthesis, and avoided heart damage in many ways. This protection mechanism was related with anti-oxidative damage. Meanwhile, MT could promote the hemodynamic recovery after myocardial ischemia-reperfusion in rats.

Characterization of the rubber tree metallothionein family reveals a role in mitigating the effects of reactive oxygen species associated with physiological stress.

PubMed

Huang, Yacheng; Fang, Yongjun; Long, Xiangyu; Liu, Linya; Wang, Jia; Zhu, Jinheng; Ma, Yanyan; Qin, Yunxia; Qi, Jiyan; Hu, Xinwen; Tang, Chaorong

2018-06-01

Metallothioneins (MTs) as reactive oxygen species (ROS) scavengers play important roles in stress response and heavy metal homeostasis. In Hevea brasiliensis (the para rubber tree that is the source of commercial natural rubber) and in other trees, the functions of MTs are not well understood. Latex exudes when the rubber tree is tapped. The flow of latex and its regeneration can be enhanced by tapping, wounding and ethylene treatment, all of which produce ROS as a by-product. Here, we show the presence of four MT genes in H. brasiliensis, comprising three Type 2 (HbMT2, -2a and -2b) and one Type 3 (HbMT3L) isoforms, representing one of the smallest MT gene families among angiosperms. The four HbMTs exhibited distinct tissue expression patterns: HbMT2 and HbMT3L mainly in leaves, HbMT2a specifically in flowers and HbMT2b in diverse tissues. The expression of HbMT2b, an isoform present in latex, decreased significantly in the latex following the stress-inducing treatments of tapping, wounding and ethephon (an ethylene generator). The expressions of the leaf-abundant isoforms, HbMT2 and -3L were up-regulated following pathogenic fungus infection and high-temperature stress, but down-regulated by low-temperature stress. These reactions were consistent with multiple defense- and hormone-responsive cis-acting elements in the HbMT promoters. Nine transcription factors were shown to implicate in the high-temperature responsiveness of HbMT2 and -3L in leaves. Overexpression of HbMT2 in Escherichia coli enhanced the bacterium's tolerance to heavy metals and ROS, consistent with its predicted role as an ROS scavenger. Taken together, our results, along with other relevant studies, suggest an important role of HbMTs in latex regeneration as well as species adaptation via the regulation of ROS homeostasis.

C. elegans epidermal wounding induces a mitochondrial ROS burst that promotes wound repair

PubMed Central

Xu, Suhong; Chisholm, Andrew D.

2014-01-01

SUMMARY Reactive oxygen species (ROS) such as hydrogen peroxide are generated at wound sites and act as long-range signals in wound healing. The roles of other ROS in wound repair are little explored. Here we reveal a cytoprotective role for mitochondrial ROS (mtROS) in C. elegans skin wound healing. We show that skin wounding causes local production of mtROS superoxide at the wound site. Inhibition of mtROS levels by mitochondrial superoxide-specific antioxidants blocks actin-based wound closure, whereas elevation of mtROS promotes wound closure and enhances survival of mutant animals defective in wound healing. mtROS act downstream of wound-triggered Ca2+ influx. We find that the Mitochondrial Calcium Uniporter MCU-1 is essential for rapid mitochondrial Ca2+ uptake and mtROS production after wounding. mtROS can promote wound closure by local inhibition of Rho GTPase activity via a redox-sensitive motif. These findings delineate a pathway acting via mtROS that promotes cytoskeletal responses in wound healing. PMID:25313960

Defects in Mitochondrial DNA Replication and Human Disease

PubMed Central

Copeland, William C.

2011-01-01

Mitochondrial DNA (mtDNA) is replicated by the DNA polymerase γ in concert with accessory proteins such as the mitochondrial DNA helicase, single stranded DNA binding protein, topoisomerase, and initiating factors. Nucleotide precursors for mtDNA replication arise from the mitochondrial salvage pathway originating from transport of nucleosides, or alternatively from cytoplasmic reduction of ribonucleotides. Defects in mtDNA replication or nucleotide metabolism can cause mitochondrial genetic diseases due to mtDNA deletions, point mutations, or depletion which ultimately cause loss of oxidative phosphorylation. These genetic diseases include mtDNA depletion syndromes (MDS) such as Alpers or early infantile hepatocerebral syndromes, and mtDNA deletion disorders, such as progressive external ophthalmoplegia (PEO), ataxia-neuropathy, or mitochondrial neurogastrointestinal encephalomyopathy (MNGIE). This review focuses on our current knowledge of genetic defects of mtDNA replication (POLG, POLG2, C10orf2) and nucleotide metabolism (TYMP, TK2, DGOUK, and RRM2B) that cause instability of mtDNA and mitochondrial disease. PMID:22176657

Mindfulness training and stress reactivity in substance abuse: results from a randomized, controlled stage I pilot study.

PubMed

Brewer, Judson A; Sinha, Rajita; Chen, Justin A; Michalsen, Ravenna N; Babuscio, Theresa A; Nich, Charla; Grier, Aleesha; Bergquist, Keri L; Reis, Deidre L; Potenza, Marc N; Carroll, Kathleen M; Rounsaville, Bruce J

2009-01-01

Stress is important in substance use disorders (SUDs). Mindfulness training (MT) has shown promise for stress-related maladies. No studies have compared MT to empirically validated treatments for SUDs. The goals of this study were to assess MT compared to cognitive behavioral therapy (CBT) in substance use and treatment acceptability, and specificity of MT compared to CBT in targeting stress reactivity. Thirty-six individuals with alcohol and/or cocaine use disorders were randomly assigned to receive group MT or CBT in an outpatient setting. Drug use was assessed weekly. After treatment, responses to personalized stress provocation were measured. Fourteen individuals completed treatment. There were no differences in treatment satisfaction or drug use between groups. The laboratory paradigm suggested reduced psychological and physiological indices of stress during provocation in MT compared to CBT. This pilot study provides evidence of the feasibility of MT in treating SUDs and suggests that MT may be efficacious in targeting stress.

Animal Mitochondrial DNA Replication

PubMed Central

Ciesielski, Grzegorz L.; Oliveira, Marcos T.; Kaguni, Laurie S.

2016-01-01

Recent advances in the field of mitochondrial DNA (mtDNA) replication highlight the diversity of both the mechanisms utilized and the structural and functional organization of the proteins at mtDNA replication fork, despite the simplicity of the animal mtDNA genome. DNA polymerase γ, mtDNA helicase and mitochondrial single-stranded DNA-binding protein- the key replisome proteins, have evolved distinct structural features and biochemical properties. These appear to be correlated with mtDNA genomic features in different metazoan taxa and with their modes of DNA replication, although a substantial integrative research is warranted to establish firmly these links. To date, several modes of mtDNA replication have been described for animals: rolling circle, theta, strand-displacement, and RITOLS/bootlace. Resolution of a continuing controversy relevant to mtDNA replication in mammals/vertebrates will have a direct impact on the mechanistic interpretation of mtDNA-related human diseases. Here we review these subjects, integrating earlier and recent data to provide a perspective on the major challenges for future research. PMID:27241933

MT1 and MT2 Melatonin Receptors: A Therapeutic Perspective

PubMed Central

Liu, Jiabei; Clough, Shannon J.; Hutchinson, Anthony J.; Adamah-Biassi, Ekue B.; Popovska-Gorevski, Marina; Dubocovich, Margarita L.

2016-01-01

Melatonin, or 5-methoxy-N-acetyltryptamine, is synthesized and released by the pineal gland and locally in the retina following a circadian rhythm, with low levels during the day and elevated levels at night. Melatonin activates two high-affinity G protein–coupled receptors, termed MT1 and MT2, to exert beneficial actions in sleep and circadian abnormality, mood disorders, learning and memory, neuroprotection, drug abuse, and cancer. Progress in understanding the role of melatonin receptors in the modulation of sleep and circadian rhythms has led to the discovery of a novel class of melatonin agonists for treating insomnia, circadian rhythms, mood disorders, and cancer. This review describes the pharmacological properties of a slow-release melatonin preparation (i.e., Circadin®) and synthetic ligands (i.e., agomelatine, ramelteon, tasimelteon), with emphasis on identifying specific therapeutic effects mediated through MT1 and MT2 receptor activation. Discovery of selective ligands targeting the MT1 or the MT2 melatonin receptors may promote the development of novel and more efficacious therapeutic agents. PMID:26514204

Japanese Alzheimer's Disease and Other Complex Disorders Diagnosis Based on Mitochondrial SNP Haplogroups

PubMed Central

Takasaki, Shigeru

2012-01-01

This paper first explains how the relations between Japanese Alzheimer's disease (AD) patients and their mitochondrial SNP frequencies at individual mtDNA positions examined using the radial basis function (RBF) network and a method based on RBF network predictions and that Japanese AD patients are associated with the haplogroups G2a and N9b1. It then describes a method for the initial diagnosis of Alzheimer's disease that is based on the mtSNP haplogroups of the AD patients. The method examines the relations between someone's mtDNA mutations and the mtSNPs of AD patients. As the mtSNP haplogroups thus obtained indicate which nucleotides of mtDNA loci are changed in the Alzheimer's patients, a person's probability of becoming an AD patient can be predicted by comparing those mtDNA mutations with that person's mtDNA mutations. The proposed method can also be used to diagnose diseases such as Parkinson's disease and type 2 diabetes and to identify people likely to become centenarians. PMID:22848858

Matrine- and oxymatrine-imprinted monodisperse polymers prepared by precipitation polymerization and their applications for the selective extraction of matrine-type alkaloids from Sophora flavescens Aiton.

PubMed

Funaya, Noriko; Haginaka, Jun

2012-07-27

Matrine (MT)- and oxymatrine (OMT)-imprinted monodisperse polymers have been prepared by precipitation polymerization. The prepared molecularly imprinted polymers (MIPs) for MT and OMT, MIP(MT) and MIP(OMT), were monodispersed microspheres of 3.3 and 3.9 μm in diameter, respectively. Binding experiments and Scatchard analyses revealed that two classes of binding sites were formed on MIP(MT) and MIP(OMT). In addition to shape recognition, ionic and hydrophobic interactions seemed to affect the retention and recognition of MT and OMT on MIP(MT) and MIP(OMT), respectively, in low acetonitrile content, and ionic and hydrophilic interactions affected these properties in high acetonitrile content. MIP(MT) was used to selectively extract MT and sophocarpine (13,14-dehydromatrine) from Sophora flavescens root, while MIP(OMT) was used to extract OMT and oxysophocarpine (13,14-dehydrooxymatrine). Copyright © 2012 Elsevier B.V. All rights reserved.

Mindfulness Training and Stress Reactivity in Substance Abuse: Results from A Randomized, Controlled Stage I Pilot Study

PubMed Central

Brewer, Judson A.; Sinha, Rajita; Chen, Justin A.; Michalsen, Ravenna N.; Babuscio, Theresa A.; Nich, Charla; Grier, Aleesha; Bergquist, Keri L.; Reis, Deidre L.; Potenza, Marc N.; Carroll, Kathleen M.; Rounsaville, Bruce J.

2011-01-01

Background Stress is important in substance use disorders (SUDs). Mindfulness training (MT) has shown promise for stress-related maladies. No studies have compared MT to empirically-validated treatments for SUDs. Goals to assess MT compared to cognitive behavioral therapy (CBT) in substance use and treatment acceptability, and specificity of MT compared to CBT in targeting stress reactivity. Methods 36 individuals with alcohol and/or cocaine use disorders were randomly assigned to receive group MT or CBT in an outpatient setting. Drug use was assessed weekly. After treatment, responses to personalized stress provocation were measured. Results Fourteen individuals completed treatment. There were no differences in treatment satisfaction, or drug use between groups. The laboratory paradigm suggested reduced psychological and physiological indices of stress during provocation in MT compared to CBT. Conclusions This pilot study provides evidence of the feasibility of MT in treating SUDs and suggests that MT may be efficacious in targeting stress. PMID:19904666

Cigarette smoking and hOGG1 Ser326Cys polymorphism are associated with 8-OHdG accumulation on mitochondrial DNA in thoracic esophageal squamous cell carcinoma.

PubMed

Lin, Chen-Sung; Wang, Liang-Shun; Chou, Teh-Ying; Hsu, Wen-Hu; Lin, Hui-Chen; Lee, Shu-Yu; Lee, Mau-Hua; Chang, Shi-Chuan; Wei, Yau-Huei

2013-12-01

We examined whether cigarette smoking affects the degrees of oxidative damage (8-hydroxyl-2'-deoxyguanosine [8-OHdG]) on mitochondrial DNA (mtDNA), whether the degree of 8-OHdG accumulation on mtDNA is related to the increased total mtDNA copy number, and whether human 8-oxoguanine DNA glycosylase 1 (hOGG1) Ser326Cys polymorphisms affect the degrees of 8-OHdG accumulation on mtDNA in thoracic esophageal squamous cell carcinoma (TESCC). DNA extracted from microdissected tissues of paired noncancerous esophageal muscles, noncancerous esophageal mucosa, and cancerous TESCC nests (n = 74) along with metastatic lymph nodes (n = 38) of 74 TESCC patients was analyzed. Both the mtDNA copy number and mtDNA integrity were analyzed by quantitative real-time polymerase chain reaction (PCR). The hOGG1 Ser326Cys polymorphisms were identified by restriction fragment length polymorphism PCR and PCR-based direct sequencing. Among noncancerous esophageal mucosa, cancerous TESCC nests, and metastatic lymph nodes, the mtDNA integrity decreased (95.2 to 47.9 to 18.6 %; P < 0.001) and the mtDNA copy number disproportionally increased (0.163 to 0.204 to 0.207; P = 0.026). In TESCC, higher indexes of cigarette smoking (0, 0-20, 20-40, and >40 pack-years) were related to an advanced pathologic N category (P = 0.038), elevated mtDNA copy number (P = 0.013), higher mtDNA copy ratio (P = 0.028), and increased mtDNA integrity (P = 0.069). The TESCC mtDNA integrity in patients with Ser/Ser, Ser/Cys, and Cys/Cys hOGG1 variants decreased stepwise from 65.2 to 52.1 to 41.3 % (P = 0.051). Elevated 8-OHdG accumulations on mtDNA in TESCC were observed. Such accumulations were associated with a compensatory increase in total mtDNA copy number, indexes of cigarette smoking, and hOGG1 Ser326Cys polymorphisms.

The Impact of Music Therapy on Anxiety in Cancer Patients Undergoing Simulation for Radiation Therapy.

PubMed

Rossetti, Andrew; Chadha, Manjeet; Torres, B Nelson; Lee, Jae K; Hylton, Donald; Loewy, Joanne V; Harrison, Louis B

2017-09-01

Radiation therapy (RT) is associated with high stress levels. The role of music therapy (MT) for patients receiving RT is not well described. This study evaluates the impact of MT on anxiety and distress during simulation in patients with newly diagnosed head and neck or breast cancer. This institutional review board-approved randomized trial of MT versus no MT at the time of simulation included the pre-State-Trait Anxiety Inventory (STAI-S Anxiety) questionnaire and Symptom Distress Thermometer (SDT). Patients randomized to MT received a consultation with a music therapist, during which music of the patients' choice to be played during simulation was selected. The no-MT patients did not receive the MT consultation, nor did they hear prerecorded music during simulation. Subsequent to the simulation, all patients repeated the STAI-S Anxiety questionnaire and the SDT. Of the 78 patients enrolled (39 in MT group and 39 in no-MT group), 38 had breast cancer and 40 had head and neck cancer. The male-female ratio was 27:51. The overall mean pre- and post-simulation STAI-S scores were 38.7 (range, 20-60) and 35.2 (range, 20-72), respectively. The overall mean pre- and post-simulation SDT scores were 3.2 (range, 0-10) and 2.5 (range, 0-10), respectively. The MT group had mean pre- and post-simulation STAI-S scores of 39.1 and 31.0, respectively (P<.0001), and the mean SDT scores before and after simulation were 3.2 and 1.7, respectively (P<.0001). The no-MT group's mean pre- and post-simulation STAI-S scores were 38.3 and 39.5, respectively (P=.46), and the mean SDT scores were 3 and 3.2, respectively (P=.51). MT significantly lowered patient anxiety and distress during the simulation procedure on the basis of the STAI-S questionnaire and SDT. Incorporating culturally centered individualized MT may be an effective intervention to reduce stressors. Continued research defining the role of MT intervention in improving the patient experience by reducing anxiety is warranted. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

Multiple essential MT1-MMP functions in tooth root formation, dentinogenesis, and tooth eruption

PubMed Central

Wimer, H.F.; Yamada, S.S.; Yang, T.; Holmbeck, K.; Foster, B.L.

2016-01-01

Membrane-type matrix metalloproteinase 1 (MT1-MMP) is a transmembrane zinc-endopeptidase that breaks down extracellular matrix components, including several collagens, during tissue development and physiological remodeling. MT1-MMP-deficient mice (MT1-MMP−/−) feature severe defects in connective tissues, such as impaired growth, osteopenia, fibrosis, and conspicuous loss of molar tooth eruption and root formation. In order to define the functions of MT1-MMP during root formation and tooth eruption, we analyzed the development of teeth and surrounding tissues in the absence of MT1-MMP. In situ hybridization showed that MT1-MMP was widely expressed in cells associated with teeth and surrounding connective tissues during development. Multiple defects in dentoalveolar tissues were associated with loss of MT1-MMP. Root formation was inhibited by defective structure and function of Hertwig's epithelial root sheath (HERS). However, no defect was found in creation of the eruption pathway, suggesting that tooth eruption was hampered by lack of alveolar bone modeling/remodeling coincident with reduced periodontal ligament (PDL) formation and integration with the alveolar bone. Additionally, we identified a significant defect in dentin formation and mineralization associated with the loss of MT1-MMP. To segregate these multiple defects and trace their cellular origin, conditional ablation of MT1-MMP was performed in epithelia and mesenchyme. Mice featuring selective loss of MT1-MMP activity in the epithelium were indistinguishable from wild type mice, and importantly, featured a normal HERS structure and molar eruption. In contrast, selective knock-out of MT1-MMP in Osterix-expressing mesenchymal cells, including osteoblasts and odontoblasts, recapitulated major defects from the global knock-out including altered HERS structure, short roots, defective dentin formation and mineralization, and reduced alveolar bone formation, although molars were able to erupt. These data indicate that MT1-MMP activity in the dental mesenchyme, and not in epithelial-derived HERS, is essential for proper tooth root formation and eruption. In summary, our studies point to an indispensable role for MT1-MMP-mediated matrix remodeling in tooth eruption through effects on bone formation, soft tissue remodeling and organization of the follicle/PDL region. PMID:26780723

Aconitase couples metabolic regulation to mitochondrial DNA maintenance.

PubMed

Chen, Xin Jie; Wang, Xiaowen; Kaufman, Brett A; Butow, Ronald A

2005-02-04

Mitochondrial DNA (mtDNA) is essential for cells to maintain respiratory competency and is inherited as a protein-DNA complex called the nucleoid. We have identified 22 mtDNA-associated proteins in yeast, among which is mitochondrial aconitase (Aco1p). We show that this Krebs-cycle enzyme is essential for mtDNA maintenance independent of its catalytic activity. Regulation of ACO1 expression by the HAP and retrograde metabolic signaling pathways directly affects mtDNA maintenance. When constitutively expressed, Aco1p can replace the mtDNA packaging function of the high-mobility-group protein Abf2p. Thus, Aco1p may integrate metabolic signals and mtDNA maintenance.

The influence of biological and environmental factors on metallothionein concentration in the blood.

PubMed

Kowalska, Katarzyna; Bizoń, Anna; Zalewska, Marta; Milnerowicz, Halina

2015-01-01

The concentration of metallothionein (MT), a low-molecular-weight protein, is regulated by many factors, primarily metals (zinc, cadmium, copper), cytokines, glucocorticoides and free radicals. These factors are determined by such aspects of human biology as gender, pregnancy and age, as well as by environmental factors including the use of oral contraceptives and cigarette smoking, all which may affect MT levels in the body. The aim of this study was to investigate the influence of these biological and environmental factors on MT concentrations in erythrocyte lysate and in plasma. MT concentrations were determined by a two-step direct enzyme-linked immunosorbent assay. Evaluation of exposure to cigarette smoking was performed by checking cotinine levels in the plasma of subjects. The studies showed higher MT concentrations in both the erythrocyte lysate and plasma of women when compared to men. Furthermore, pregnancy causes an increase of MT concentration in plasma, while oral contraceptives cause an elevated concentration of MT in erythrocyte lysate. Age impacts plasma MT concentrations in men, whereas it does not affect concentrations of MT in erythrocyte lysate. Copyright © 2014 Elsevier GmbH. All rights reserved.

Multiple ways to prevent transmission of paternal mitochondrial DNA for maternal inheritance in animals.

PubMed

Sato, Ken; Sato, Miyuki

2017-10-01

Mitochondria contain their own DNA (mtDNA). In most sexually reproducing organisms, mtDNA is inherited maternally (uniparentally); this type of inheritance is thus referred to as 'maternal (uniparental) inheritance'. Recent studies have revealed various mechanisms to prevent the transmission of sperm-derived paternal mtDNA to the offspring, thereby ensuring maternal inheritance of mtDNA. In the nematode Caenorhabditis elegans, paternal mitochondria and their mtDNA degenerate almost immediately after fertilization and are selectively degraded by autophagy, which is referred to as 'allophagy' (allogeneic [non-self] organelle autophagy). In the fruit fly Drosophila melanogaster, paternal mtDNA is largely eliminated by an endonuclease G-mediated mechanism. Paternal mitochondria are subsequently removed by endocytic and autophagic pathways after fertilization. In many mammals, including humans, paternal mitochondria enter fertilized eggs. However, the fate of paternal mitochondria and their mtDNA in mammals is still a matter of debate. In this review, we will summarize recent knowledge on the molecular mechanisms underlying the prevention of paternal mtDNA transmission, which ensures maternal mtDNA inheritance in animals. © The Authors 2017. Published by Oxford University Press on behalf of the Japanese Biochemical Society. All rights reserved.

Quorum Sensing Extracellular Death Peptides Enhance the Endoribonucleolytic Activities of Mycobacterium tuberculosis MazF Toxins

PubMed Central

Nigam, Akanksha; Kumar, Sathish

2018-01-01

ABSTRACT mazEF is a toxin-antitoxin module located on chromosomes of most bacteria. MazF toxins are endoribonucleases antagonized by MazE antitoxins. Previously, we characterized several quorum sensing peptides called "extracellular death factors" (EDFs). When secreted from bacterial cultures, EDFs induce interspecies cell death. EDFs also enhance the endoribonucleolytic activity of Escherichia coli MazF. Mycobacterium tuberculosis carries several mazEF modules. Among them, the endoribonucleolytic activities of MazF proteins mt-1, mt-3, and mt-6 were identified. MazF-mt6 and MazF-mt-3 cleave M. tuberculosis rRNAs. Here we report the in vitro effects of EDFs on the endoribonucleolytic activities of M. tuberculosis MazFs. Escherichia coli EDF (EcEDF) and the three Pseudomonas aeruginosa EDFs (PaEDFs) individually enhance the endoribonucleolytic activities of MazF-mt6 and MazF-mt3 and overcome the inhibitory effect of MazE-mt3 or MazE-mt6 on the endoribonucleolytic activities of the respective toxins. We propose that these EDFs can serve as a basis for a novel class of antibiotics against M. tuberculosis. PMID:29717013

Associations of mitochondrial haplogroups and mitochondrial DNA copy numbers with end-stage renal disease in a Han population.

PubMed

Zhang, Yuheng; Zhao, Ying; Wen, Shuzhen; Yan, Rengna; Yang, Qinglan; Chen, Huimei

2017-09-01

Mitochondrial DNA (mtDNA) is closely related to mitochondrion function, and variations have been suggested to be involved in pathogenesis of complex diseases. The present study sought to elucidate mitochondrial haplogroups and mtDNA copy number in end-stage renal disease (ESRD) in a Han population. First, the mitochondrial haplogroups of 37 ESRD patients were clustered into several haplogroups, and haplogroup A & D were taken as the candidate risk haplogroups for ESRD. Second, the frequencies of A and D were assessed in 344 ESRD patients and 438 healthy controls, respectively. Haplogroup D was found to be risk maker for ESRD in young subjects (<30 years) with an OR of 2.274. Finally, intracellular and cell-free mtDNA copy numbers were evaluated with quantitative-PCR. The ESRD patients exhibited greater cell-free mtDNA contents than the healthy controls but less intracellular mtDNA. Haplogroup D exhibited a further increase in cell-free mtDNA content and a decrease in intracellular mtDNA content among the ESRDs patients. Our findings suggest that mtNDA haplogroup D may contributes to pathogenesis of early-onset ESRD through alterations of mtDNA copy numbers.

Mitochondrial DNA Damage and its Consequences for Mitochondrial Gene Expression

PubMed Central

Cline, Susan D.

2012-01-01

How mitochondria process DNA damage and whether a change in the steady-state level of mitochondrial DNA damage (mtDNA) contributes to mitochondrial dysfunction are questions that fuel burgeoning areas of research into aging and disease pathogenesis. Over the past decade, researchers have identified and measured various forms of endogenous and environmental mtDNA damage and have elucidated mtDNA repair pathways. Interestingly, mitochondria do not appear to contain the full range of DNA repair mechanisms that operate in the nucleus, although mtDNA contains types of damage that are targets of each nuclear DNA repair pathway. The reduced repair capacity may, in part, explain the high mutation frequency of the mitochondrial chromosome. Since mtDNA replication is dependent on transcription, mtDNA damage may alter mitochondrial gene expression at three levels: by causing DNA polymerase γ nucleotide incorporation errors leading to mutations, by interfering with the priming of mtDNA replication by the mitochondrial RNA polymerase, or by inducing transcriptional mutagenesis or premature transcript termination. This review summarizes our current knowledge of mtDNA damage, its repair, and its effects on mtDNA integrity and gene expression. PMID:22728831

TOP1MT deficiency promotes GC invasion and migration via the enhancements of LDHA expression and aerobic glycolysis.

PubMed

Wang, Hongqiang; Zhou, Rui; Sun, Li; Xia, Jianling; Yang, Xuchun; Pan, Changqie; Huang, Na; Shi, Min; Bin, Jianping; Liao, Yulin; Liao, Wangjun

2017-11-01

Aerobic glycolysis plays an important role in cancer progression. New target genes regulating cancer aerobic glycolysis must be explored to improve patient prognosis. Mitochondrial topoisomerase I ( TOP1MT ) deficiency suppresses glucose oxidative metabolism but enhances glycolysis in normal cells. Here, we examined the role of TOP1MT in gastric cancer (GC) and attempted to determine the underlying mechanism. Using in vitro and in vivo experiments and analyzing the clinicopathological characteristics of patients with GC, we found that TOP1MT expression was lower in GC samples than in adjacent nonmalignant tissues. TOP1MT knockdown significantly promoted GC migration and invasion in vitro and in vivo Importantly, TOP1MT silencing increased glucose consumption, lactate production, glucose transporter 1 expression and the epithelial-mesenchymal transition (EMT) in GC. Additionally, regulation of glucose metabolism induced by TOP1MT was significantly associated with lactate dehydrogenase A (LDHA) expression. A retrospective analysis of clinical data from 295 patients with GC demonstrated that low TOP1MT expression was associated with lymph node metastasis, recurrence and high mortality rates. TOP1MT deficiency enhanced glucose aerobic glycolysis by stimulating LDHA to promote GC progression. © 2017 The authors.

Serum Metallothioneins in Childhood Tumours—A Potential Prognostic Marker

PubMed Central

Kruseova, Jarmila; Hynek, David; Adam, Vojtech; Kizek, Rene; Prusa, Richard; Hrabeta, Jan; Eckschlager, Tomas

2013-01-01

Metallothioneins (MT) are low molecular weight, cysteine-rich proteins maintaining metal ions homeostasis. They play a role in carcinogenesis and may also cause chemoresistance. The aim of the study was to explore the importance of MT serum levels in children suffering from malignant tumours. This prospective study involves examination of 865 samples from 172 patients with malignant tumours treated from 2008 to 2011 at University Hospital Motol. MT serum levels were determined using differential pulse voltammetry–Brdicka reaction. Mean MT level was 2.7 ± 0.5 μM. There was no statistically significant difference between MT levels in different tumours. We also did not find any correlation between MT levels and response to therapy or clinical stages. However, we found a positive correlation between MT levels and age (p = 0.009) and a negative correlation with absolute lymphocyte number (p = 0.001). The fact that patients who had early disease recurrence had lower MT levels during the treatment (complete remission 2.67 vs. recurring 2.34, p = 0.001) seems to be important for clinical practice. Accordingly we believe that there is benefit in further studies of serum MT levels in tumours. PMID:23743828

Microbial translocation and skeletal muscle in young and old vervet monkeys.

PubMed

Kavanagh, Kylie; Brown, Richelle N; Davis, Ashley T; Uberseder, Beth; Floyd, Edison; Pfisterer, Bianca; Shively, Carol A

2016-06-01

Intestinal barrier dysfunction leads to microbial translocation (MT) and inflammation in vertebrate and invertebrate animal models. Age is recently recognized as a factor leading to MT, and in some human and animal model studies, MT was associated with physical function. We evaluated sarcopenia, inflammation, MT biomarkers, and muscle insulin sensitivity in healthy female vervet monkeys (6-27 years old). Monkeys were fed consistent diets and had large and varied environments to facilitate physical activity, and stable social conditions. Aging led to sarcopenia as indicated by reduced walking speeds and muscle mass, but general metabolic health was similar in older monkeys (n = 25) as compared to younger ones (n = 26). When older monkeys were physically active, their MT burden approximated that in young monkeys; however, when older monkeys were sedentary, MT burden was dramatically increased. MT levels were positively associated with inflammatory burden and negatively associated with skeletal muscle insulin sensitivity. Time spent being active was positively associated with insulin sensitivity as expected, but this relationship was specifically modified by the individual monkey's MT, not inflammatory burden. Our data supports clinical observations that MT interacts with physical function as a factor in healthy aging.

Adolescents with greater mental toughness show higher sleep efficiency, more deep sleep and fewer awakenings after sleep onset.

PubMed

Brand, Serge; Gerber, Markus; Kalak, Nadeem; Kirov, Roumen; Lemola, Sakari; Clough, Peter J; Pühse, Uwe; Holsboer-Trachsler, Edith

2014-01-01

Mental toughness (MT) is understood as the display of confidence, commitment, challenge, and control. Mental toughness is associated with resilience against stress. However, research has not yet focused on the relation between MT and objective sleep. The aim of the present study was therefore to explore the extent to which greater MT is associated with objectively assessed sleep among adolescents. A total of 92 adolescents (35% females; mean age, 18.92 years) completed the Mental Toughness Questionnaire. Participants were split into groups of high and low mental toughness. Objective sleep was recorded via sleep electroencephalograms and subjective sleep was assessed via a questionnaire. Compared with participants with low MT, participants with high MT had higher sleep efficiency, a lower number of awakenings after sleep onset, less light sleep, and more deep sleep. They also reported lower daytime sleepiness. Adolescents reporting higher MT also had objectively better sleep, as recorded via sleep electroencephalograms. A bidirectional association between MT and sleep seems likely; therefore, among adolescence, improving sleep should increase MT, and improving MT should increase sleep. Copyright © 2014 Society for Adolescent Health and Medicine. Published by Elsevier Inc. All rights reserved.

Digital Communications Terminal High Order Programming Language Study (DCT HOL Study). Volume I.

DTIC Science & Technology

1980-11-26

3-3 PASCAL/M Digital Marketing ......... 3-3 PASCAL/MT MT MicroSystems .................... 3-3 PASCAL/Z Ithaca IntersysteMs...II Avocet Systems, Inc. 3.6 PASCAL - ISO PASCAL Whitesmith, Ltd. - PASCAL 64000 lbwlett-Packard - PASCAL/H Digital Marketing - PASCAL/MT MT

44 CFR 15.4 - Inspection.

Code of Federal Regulations, 2013 CFR

2013-10-01

... GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY TRAINING... containers being brought into, while on or being removed from Mt. Weather or the NETC are subject to... may accompany an arrest. (b) Inspection at Mt. Weather. We authorize inspection at Mt. Weather to...

44 CFR 15.4 - Inspection.

Code of Federal Regulations, 2012 CFR

2012-10-01

... GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY TRAINING... containers being brought into, while on or being removed from Mt. Weather or the NETC are subject to... may accompany an arrest. (b) Inspection at Mt. Weather. We authorize inspection at Mt. Weather to...

44 CFR 15.4 - Inspection.

Code of Federal Regulations, 2014 CFR

2014-10-01

... GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY TRAINING... containers being brought into, while on or being removed from Mt. Weather or the NETC are subject to... may accompany an arrest. (b) Inspection at Mt. Weather. We authorize inspection at Mt. Weather to...

44 CFR 15.4 - Inspection.

Code of Federal Regulations, 2011 CFR

2011-10-01

... GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY TRAINING... containers being brought into, while on or being removed from Mt. Weather or the NETC are subject to... may accompany an arrest. (b) Inspection at Mt. Weather. We authorize inspection at Mt. Weather to...

44 CFR 15.4 - Inspection.

Code of Federal Regulations, 2010 CFR

2010-10-01

... GENERAL CONDUCT AT THE MT. WEATHER EMERGENCY ASSISTANCE CENTER AND AT THE NATIONAL EMERGENCY TRAINING... containers being brought into, while on or being removed from Mt. Weather or the NETC are subject to... may accompany an arrest. (b) Inspection at Mt. Weather. We authorize inspection at Mt. Weather to...

Prehospital shock index and pulse pressure/heart rate ratio to predict massive transfusion after severe trauma: Retrospective analysis of a large regional trauma database.

PubMed

Pottecher, Julien; Ageron, François-Xavier; Fauché, Clémence; Chemla, Denis; Noll, Eric; Duranteau, Jacques; Chapiteau, Laurent; Payen, Jean-François; Bouzat, Pierre

2016-10-01

Early and accurate detection of severe hemorrhage is critical for a timely trigger of massive transfusion (MT). Hemodynamic indices combining heart rate (HR) and either systolic (shock index [SI]) or pulse pressure (PP) (PP/HR ratio) have been shown to track blood loss during hemorrhage. The present study assessed the accuracy of prehospital SI and PP/HR ratio to predict subsequent MT, using the gray-zone approach. This was a retrospective analysis (January 1, 2009, to December 31, 2011) of a prospectively developed trauma registry (TRENAU), in which the triage scheme combines patient severity and hospital facilities. Thresholds for MT were defined as either classic (≥10 red blood cell units within the first 24 hours [MT1]) or critical (≥3 red blood cells within the first hour [MT2]). The receiver operating characteristic curves and gray zones were defined for SI and PP/HR ratio to predict MT1 and MT2 and faced with initial triage scheme. The TRENAU registry included 3,689 trauma patients, of which 2,557 had complete chart recovery and 176 (6.9%) required MT. In the whole population, PP/HR ratio and SI moderately and similarly predicted MT1 (area under the receiver operating characteristic curve, 0.77 [95% confidence interval {CI}, 0.70-0.84] and 0.80 [95% CI, 0.74-0.87], respectively, p = 0.064) and MT2 (0.71 [95% CI, 0.67-0.76] and 0.72 [95% CI, 0.68-0.77], respectively, p = 0.48). The proportions of patients in the gray zone for PP/HR ratio and SI were 61% versus 40%, respectively, to predict MT1 (p < 0.001) and 62% versus 71%, respectively, to predict MT2 (p < 0.001). In the least severe patient, both indices had fair accuracy to predict MT1 (0.91 [95% CI, 0.82-1.00] vs. 0.87 [95% CI, 0.79-1.00]; p = 0.638), and PP/HR ratio outperformed SI to predict MT2 (0.72 [95% CI, 0.59-0.84] vs. 0.54 [95% CI, 0.33-0.74]; p < 0.015). In an unselected trauma population, prehospital SI and PP/HR ratio were moderately accurate in predicting MT. In the seemingly least severe patients, an improvement of prehospital undertriage for MT may be gained by using the PP/HR ratio. Epidemiolgic study, level III.

Selective sweeps of mitochondrial DNA can drive the evolution of uniparental inheritance.

PubMed

Christie, Joshua R; Beekman, Madeleine

2017-08-01

Although the uniparental (or maternal) inheritance of mitochondrial DNA (mtDNA) is widespread, the reasons for its evolution remain unclear. Two main hypotheses have been proposed: selection against individuals containing different mtDNAs (heteroplasmy) and selection against "selfish" mtDNA mutations. Recently, uniparental inheritance was shown to promote adaptive evolution in mtDNA, potentially providing a third hypothesis for its evolution. Here, we explore this hypothesis theoretically and ask if the accumulation of beneficial mutations provides a sufficient fitness advantage for uniparental inheritance to invade a population in which mtDNA is inherited biparentally. In a deterministic model, uniparental inheritance increases in frequency but cannot replace biparental inheritance if only a single beneficial mtDNA mutation sweeps through the population. When we allow successive selective sweeps of mtDNA, however, uniparental inheritance can replace biparental inheritance. Using a stochastic model, we show that a combination of selection and drift facilitates the fixation of uniparental inheritance (compared to a neutral trait) when there is only a single selective mtDNA sweep. When we consider multiple mtDNA sweeps in a stochastic model, uniparental inheritance becomes even more likely to replace biparental inheritance. Our findings thus suggest that selective sweeps of beneficial mtDNA haplotypes can drive the evolution of uniparental inheritance. © 2017 The Author(s). Evolution © 2017 The Society for the Study of Evolution.

Structural and functional studies of a phosphatidic acid-binding antifungal plant defensin MtDef4: Identification of an RGFRRR motif governing fungal cell entry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sagaram, Uma S.; El-Mounadi, Kaoutar; Buchko, Garry W.

A highly conserved plant defensin MtDef4 potently inhibits the growth of a filamentous fungus Fusarium graminearum. MtDef4 is internalized by cells of F. graminearum. To determine its mechanism of fungal cell entry and antifungal action, NMR solution structure of MtDef4 has been determined. The analysis of its structure has revealed a positively charged patch on the surface of the protein consisting of arginine residues in its γ-core signature, a major determinant of the antifungal activity of MtDef4. Here, we report functional analysis of the RGFRRR motif of the γ-core signature of MtDef4. The replacement of RGFRRR to AAAARR or tomore » RGFRAA not only abolishes fungal cell entry but also results in loss of the antifungal activity of MtDef4. MtDef4 binds strongly to phosphatidic acid (PA), a precursor for the biosynthesis of membrane phospholipids and a signaling lipid known to recruit cytosolic proteins to membranes. Mutations of RGFRRR which abolish fungal cell entry of MtDef4 also impair its binding to PA. Our results suggest that RGFRRR motif is a translocation signal for entry of MtDef4 into fungal cells and that this positively charged motif likely mediates interaction of this defensin with PA as part of its antifungal action.« less

Preventing the transmission of pathogenic mitochondrial DNA mutations: Can we achieve long-term benefits from germ-line gene transfer?

PubMed

Samuels, David C; Wonnapinij, Passorn; Chinnery, Patrick F

2013-03-01

Mitochondrial medicine is one of the few areas of genetic disease where germ-line transfer is being actively pursued as a treatment option. All of the germ-line transfer methods currently under development involve some carry-over of the maternal mitochondrial DNA (mtDNA) heteroplasmy, potentially delivering the pathogenic mutation to the offspring. Rapid changes in mtDNA heteroplasmy have been observed within a single generation, and so any 'leakage' of mutant mtDNA could lead to mtDNA disease in future generations, compromising the reproductive health of the first generation, and leading to repeated interventions in subsequent generations. To determine whether this is a real concern, we developed a model of mtDNA heteroplasmy inheritance by studying 87 mother-child pairs, and predicted the likely outcome of different levels of 'mutant mtDNA leakage' on subsequent maternal generations. This showed that, for a clinical threshold of 60%, reducing the proportion of mutant mtDNA to <5% dramatically reduces the chance of disease recurrence in subsequent generations, but transmitting >5% mutant mtDNA was associated with a significant chance of disease recurrence. Mutations with a lower clinical threshold were associated with a higher risk of recurrence. Our findings provide reassurance that, at least from an mtDNA perspective, methods currently under development have the potential to effectively eradicate pathogenic mtDNA mutations from subsequent generations.

Helicopter magnetic and electromagnetic surveys at Mounts Adams, Baker and Rainier, Washington: implications for debris flow hazards and volcano hydrology

USGS Publications Warehouse

Finn, Carol A.; Deszcz-Pan, Maria

2011-01-01

High‐resolution helicopter magnetic and electromagnetic (HEM) data flown over the rugged, ice‐covered Mt. Adams, Mt. Baker and Mt. Rainier volcanoes (Washington), reveal the distribution of alteration, water and ice thickness essential to evaluating volcanic landslide hazards. These data, combined with geological mapping and rock property measurements, indicate the presence of appreciable thicknesses (>500 m) of water‐saturated hydrothermally altered rock west of the modern summit of Mount Rainier in the Sunset Amphitheater region and in the central core of Mount Adams north of the summit. Alteration at Mount Baker is restricted to thinner (<300 m) zones beneath Sherman Crater and the Dorr Fumarole Fields. The EM data identified water‐saturated rocks from the surface to the detection limit (100–200 m) in discreet zones at Mt. Rainier and Mt Adams and over the entire summit region at Mt. Baker. The best estimates for ice thickness are obtained over relatively low resistivity (<800 ohm‐m) ground for the main ice cap on Mt. Adams and over most of the summit of Mt. Baker. The modeled distribution of alteration, pore fluids and partial ice volumes on the volcanoes helps identify likely sources for future alteration‐related debris flows, including the Sunset Amphitheater region at Mt. Rainier, steep cliffs at the western edge of the central altered zone at Mount Adams and eastern flanks of Mt. Baker.

Replication intermediates of the linear mitochondrial DNA of Candida parapsilosis suggest a common recombination based mechanism for yeast mitochondria.

PubMed

Gerhold, Joachim M; Sedman, Tiina; Visacka, Katarina; Slezakova, Judita; Tomaska, Lubomir; Nosek, Jozef; Sedman, Juhan

2014-08-15

Variation in the topology of mitochondrial DNA (mtDNA) in eukaryotes evokes the question if differently structured DNAs are replicated by a common mechanism. RNA-primed DNA synthesis has been established as a mechanism for replicating the circular animal/mammalian mtDNA. In yeasts, circular mtDNA molecules were assumed to be templates for rolling circle DNA-replication. We recently showed that in Candida albicans, which has circular mapping mtDNA, recombination driven replication is a major mechanism for replicating a complex branched mtDNA network. Careful analyses of C. albicans-mtDNA did not reveal detectable amounts of circular DNA molecules. In the present study we addressed the question of how the unit sized linear mtDNA of Candida parapsilosis terminating at both ends with arrays of tandem repeats (mitochondrial telomeres) is replicated. Originally, we expected to find replication intermediates diagnostic of canonical bi-directional replication initiation at the centrally located bi-directional promoter region. However, we found that the linear mtDNA of Candida parapsilosis also employs recombination for replication initiation. The most striking findings were that the mitochondrial telomeres appear to be hot spots for recombination driven replication, and that stable RNA:DNA hybrids, with a potential role in mtDNA replication, are also present in the mtDNA preparations. © 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

The high mobility group protein Abf2p influences the level of yeast mitochondrial DNA recombination intermediates in vivo.

PubMed

MacAlpine, D M; Perlman, P S; Butow, R A

1998-06-09

Abf2p is a high mobility group (HMG) protein found in yeast mitochondria that is required for the maintenance of wild-type (rho+) mtDNA in cells grown on fermentable carbon sources, and for efficient recombination of mtDNA markers in crosses. Here, we show by two-dimensional gel electrophoresis that Abf2p promotes or stabilizes Holliday recombination junction intermediates in rho+ mtDNA in vivo but does not influence the high levels of recombination intermediates readily detected in the mtDNA of petite mutants (rho-). mtDNA recombination junctions are not observed in rho+ mtDNA of wild-type cells but are elevated to detectable levels in cells with a null allele of the MGT1 gene (Deltamgt1), which codes for a mitochondrial cruciform-cutting endonuclease. The level of recombination intermediates in rho+ mtDNA of Deltamgt1 cells is decreased about 10-fold if those cells contain a null allele of the ABF2 gene. Overproduction of Abf2p by >/= 10-fold in wild-type rho+ cells, which leads to mtDNA instability, results in a dramatic increase in mtDNA recombination intermediates. Specific mutations in the two Abf2p HMG boxes required for DNA binding diminishes these responses. We conclude that Abf2p functions in the recombination of rho+ mtDNA.

Mitochondrial Recombination Reveals Mito-Mito Epistasis in Yeast.

PubMed

Wolters, John F; Charron, Guillaume; Gaspary, Alec; Landry, Christian R; Fiumera, Anthony C; Fiumera, Heather L

2018-05-01

Genetic variation in mitochondrial DNA (mtDNA) provides adaptive potential although the underlying genetic architecture of fitness components within mtDNAs is not known. To dissect functional variation within mtDNAs, we first identified naturally occurring mtDNAs that conferred high or low fitness in Saccharomyces cerevisiae by comparing growth in strains containing identical nuclear genotypes but different mtDNAs. During respiratory growth under temperature and oxidative stress conditions, mitotype effects were largely independent of nuclear genotypes even in the presence of mito-nuclear interactions. Recombinant mtDNAs were generated to determine fitness components within high- and low-fitness mtDNAs. Based on phenotypic distributions of isogenic strains containing recombinant mtDNAs, we found that multiple loci contributed to mitotype fitness differences. These mitochondrial loci interacted in epistatic, nonadditive ways in certain environmental conditions. Mito-mito epistasis ( i.e. , nonadditive interactions between mitochondrial loci) influenced fitness in progeny from four different crosses, suggesting that mito-mito epistasis is a widespread phenomenon in yeast and other systems with recombining mtDNAs. Furthermore, we found that interruption of coadapted mito-mito interactions produced recombinant mtDNAs with lower fitness. Our results demonstrate that mito-mito epistasis results in functional variation through mitochondrial recombination in fungi, providing modes for adaptive evolution and the generation of mito-mito incompatibilities. Copyright © 2018 by the Genetics Society of America.

Evidence for double-strand break mediated mitochondrial DNA replication in Saccharomyces cerevisiae

PubMed Central

Prasai, Kanchanjunga; Robinson, Lucy C.; Scott, Rona S.; Tatchell, Kelly

2017-01-01

Abstract The mechanism of mitochondrial DNA (mtDNA) replication in Saccharomyces cerevisiae is controversial. Evidence exists for double-strand break (DSB) mediated recombination-dependent replication at mitochondrial replication origin ori5 in hypersuppressive ρ− cells. However, it is not clear if this replication mode operates in ρ+ cells. To understand this, we targeted bacterial Ku (bKu), a DSB binding protein, to the mitochondria of ρ+ cells with the hypothesis that bKu would bind persistently to mtDNA DSBs, thereby preventing mtDNA replication or repair. Here, we show that mitochondrial-targeted bKu binds to ori5 and that inducible expression of bKu triggers petite formation preferentially in daughter cells. bKu expression also induces mtDNA depletion that eventually results in the formation of ρ0 cells. This data supports the idea that yeast mtDNA replication is initiated by a DSB and bKu inhibits mtDNA replication by binding to a DSB at ori5, preventing mtDNA segregation to daughter cells. Interestingly, we find that mitochondrial-targeted bKu does not decrease mtDNA content in human MCF7 cells. This finding is in agreement with the fact that human mtDNA replication, typically, is not initiated by a DSB. Therefore, this study provides evidence that DSB-mediated replication is the predominant form of mtDNA replication in ρ+ yeast cells. PMID:28549155

Replication Intermediates of the Linear Mitochondrial DNA of Candida parapsilosis Suggest a Common Recombination Based Mechanism for Yeast Mitochondria*

PubMed Central

Gerhold, Joachim M.; Sedman, Tiina; Visacka, Katarina; Slezakova, Judita; Tomaska, Lubomir; Nosek, Jozef; Sedman, Juhan

2014-01-01

Variation in the topology of mitochondrial DNA (mtDNA) in eukaryotes evokes the question if differently structured DNAs are replicated by a common mechanism. RNA-primed DNA synthesis has been established as a mechanism for replicating the circular animal/mammalian mtDNA. In yeasts, circular mtDNA molecules were assumed to be templates for rolling circle DNA-replication. We recently showed that in Candida albicans, which has circular mapping mtDNA, recombination driven replication is a major mechanism for replicating a complex branched mtDNA network. Careful analyses of C. albicans-mtDNA did not reveal detectable amounts of circular DNA molecules. In the present study we addressed the question of how the unit sized linear mtDNA of Candida parapsilosis terminating at both ends with arrays of tandem repeats (mitochondrial telomeres) is replicated. Originally, we expected to find replication intermediates diagnostic of canonical bi-directional replication initiation at the centrally located bi-directional promoter region. However, we found that the linear mtDNA of Candida parapsilosis also employs recombination for replication initiation. The most striking findings were that the mitochondrial telomeres appear to be hot spots for recombination driven replication, and that stable RNA:DNA hybrids, with a potential role in mtDNA replication, are also present in the mtDNA preparations. PMID:24951592

Mhr1p-dependent concatemeric mitochondrial DNA formation for generating yeast mitochondrial homoplasmic cells.

PubMed

Ling, Feng; Shibata, Takehiko

2004-01-01

Mitochondria carry many copies of mitochondrial DNA (mtDNA), but mt-alleles quickly segregate during mitotic growth through unknown mechanisms. Consequently, all mtDNA copies are often genetically homogeneous within each individual ("homoplasmic"). Our previous study suggested that tandem multimers ("concatemers") formed mainly by the Mhr1p (a yeast nuclear gene-encoded mtDNA-recombination protein)-dependent pathway are required for mtDNA partitioning into buds with concomitant monomerization. The transmission of a few randomly selected clones (as concatemers) of mtDNA into buds is a possible mechanism to establish homoplasmy. The current study provides evidence for this hypothesis as follows: the overexpression of MHR1 accelerates mt-allele-segregation in growing heteroplasmic zygotes, and mhr1-1 (recombination-deficient) causes its delay. The mt-allele-segregation rate correlates with the abundance of concatemers, which depends on Mhr1p. In G1-arrested cells, concatemeric mtDNA was labeled by [14C]thymidine at a much higher density than monomers, indicating concatemers as the immediate products of mtDNA replication, most likely in a rolling circle mode. After releasing the G1 arrest in the absence of [14C]thymidine, the monomers as the major species in growing buds of dividing cells bear a similar density of 14C as the concatemers in the mother cells, indicating that the concatemers in mother cells are the precursors of the monomers in buds.

No recombination of mtDNA after heteroplasmy for 50 generations in the mouse maternal germline

PubMed Central

Hagström, Erik; Freyer, Christoph; Battersby, Brendan J.; Stewart, James B.; Larsson, Nils-Göran

2014-01-01

Variants of mitochondrial DNA (mtDNA) are commonly used as markers to track human evolution because of the high sequence divergence and exclusive maternal inheritance. It is assumed that the inheritance is clonal, i.e. that mtDNA is transmitted between generations without germline recombination. In contrast to this assumption, a number of studies have reported the presence of recombinant mtDNA molecules in cell lines and animal tissues, including humans. If germline recombination of mtDNA is frequent, it would strongly impact phylogenetic and population studies by altering estimates of coalescent time and branch lengths in phylogenetic trees. Unfortunately, this whole area is controversial and the experimental approaches have been widely criticized as they often depend on polymerase chain reaction (PCR) amplification of mtDNA and/or involve studies of transformed cell lines. In this study, we used an in vivo mouse model that has had germline heteroplasmy for a defined set of mtDNA mutations for more than 50 generations. To assess recombination, we adapted and validated a method based on cloning of single mtDNA molecules in the λ phage, without prior PCR amplification, followed by subsequent mutation analysis. We screened 2922 mtDNA molecules and found no germline recombination after transmission of mtDNA under genetically and evolutionary relevant conditions in mammals. PMID:24163253

Evidence for recombination of mitochondrial DNA in triploid crucian carp.

PubMed

Guo, Xinhong; Liu, Shaojun; Liu, Yun

2006-03-01

In this study, we report the complete mitochondrial DNA (mtDNA) sequences of the allotetraploid and triploid crucian carp and compare the complete mtDNA sequences between the triploid crucian carp and its female parent Japanese crucian carp and between the triploid crucian carp and its male parent allotetraploid. Our results indicate that the complete mtDNA nucleotide identity (98%) between the triploid crucian carp and its male parent allotetraploid was higher than that (93%) between the triploid crucian carp and its female parent Japanese crucian carp. Moreover, the presence of a pattern of identity and difference at synonymous sites of mitochondrial genomes between the triploid crucian carp and its parents provides direct evidence that triploid crucian carp possessed the recombination mtDNA fragment (12,759 bp) derived from the paternal fish. These results suggest that mtDNA recombination was derived from the fusion of the maternal and paternal mtDNAs. Compared with the haploid egg with one set of genome from the Japanese crucian carp, the diploid sperm with two sets of genomes from the allotetraploid could more easily make its mtDNA fuse with the mtDNA of the haploid egg. In addition, the triple hybrid nature of the triploid crucian carp probably allowed its better mtDNA recombination. In summary, our results provide the first evidence of mtDNA combination in polyploid fish.

Analysis of European mtDNAs for recombination.

PubMed

Elson, J L; Andrews, R M; Chinnery, P F; Lightowlers, R N; Turnbull, D M; Howell, N

2001-01-01

The standard paradigm postulates that the human mitochondrial genome (mtDNA) is strictly maternally inherited and that, consequently, mtDNA lineages are clonal. As a result of mtDNA clonality, phylogenetic and population genetic analyses should therefore be free of the complexities imposed by biparental recombination. The use of mtDNA in analyses of human molecular evolution is contingent, in fact, on clonality, which is also a condition that is critical both for forensic studies and for understanding the transmission of pathogenic mtDNA mutations within families. This paradigm, however, has been challenged recently by Eyre-Walker and colleagues. Using two different tests, they have concluded that recombination has contributed to the distribution of mtDNA polymorphisms within the human population. We have assembled a database that comprises the complete sequences of 64 European and 2 African mtDNAs. When this set of sequences was analyzed using any of three measures of linkage disequilibrium, one of the tests of Eyre-Walker and colleagues, there was no evidence for mtDNA recombination. When their test for excess homoplasies was applied to our set of sequences, only a slight excess of homoplasies was observed. We discuss possible reasons that our results differ from those of Eyre-Walker and colleagues. When we take the various results together, our conclusion is that mtDNA recombination has not been sufficiently frequent during human evolution to overturn the standard paradigm.

Melatonin signaling affects the timing in the daily rhythm of phagocytic activity by the retinal pigment epithelium.

PubMed

Laurent, Virgine; Sengupta, Anamika; Sánchez-Bretaño, Aída; Hicks, David; Tosini, Gianluca

2017-12-01

Earlier studies in Xenopus have indicated a role for melatonin in the regulation of retinal disk shedding, but the role of melatonin in the regulation of daily rhythm in mammalian disk shedding and phagocytosis is still unclear. We recently produced a series of transgenic mice lacking melatonin receptor type 1 (MT 1 ) or type 2 (MT 2 ) in a melatonin-proficient background and have shown that removal of MT 1 and MT 2 receptors induces significant effects on daily and circadian regulation of the electroretinogram as well as on the viability of photoreceptor cells during aging. In this study we investigated the daily rhythm of phagocytic activity by the retinal pigment epithelium in MT 1 and MT 2 knock-out mice. Our data indicate that in MT 1 and MT 2 knock-out mice the peak of phagocytosis is advanced by 3 h with respect to wild-type mice and occurred in dark rather than after the onset of light, albeit the mean phagocytic activity over the 24-h period did not change among the three genotypes. Nevertheless, this small change in the profile of daily phagocytic rhythms may produce a significant effect on retinal health since MT 1 and MT 2 knock-out mice showed a significant increase in lipofuscin accumulation in the retinal pigment epithelium. Copyright © 2017 Elsevier Ltd. All rights reserved.

Neurofunctional changes after a single mirror therapy intervention in chronic ischemic stroke.

PubMed

Novaes, Morgana M; Palhano-Fontes, Fernanda; Peres, Andre; Mazzetto-Betti, Kelley; Pelicioni, Maristela; Andrade, Kátia C; Dos Santos, Antonio Carlos; Pontes-Neto, Octavio; Araujo, Draulio

2018-03-20

Mirror therapy (MT) is becoming an alternative rehabilitation strategy for various conditions, including stroke. Although recent studies suggest the positive benefit of MT in chronic stroke motor recovery, little is known about its neural mechanisms. To identify functional brain changes induced by a single MT intervention in ischemic stroke survivors, assessed by both transcranial magnetic stimulation (TMS) and functional magnetic resonance imaging (fMRI). TMS and fMRI were used to investigate 15 stroke survivors immediately before and after a single 30-min MT session. We found statistically significant increase in post-MT motor evoked potential (MEP) amplitude (increased excitability) from the affected primary motor cortex (M1), when compared to pre-MT MEP. Post-MT fMRI maps were associated with a more organized and constrained pattern, with a more focal M1 activity within the affected hemisphere after MT, limited to the cortical area of hand representation. Furthermore, we find a change in the balance of M1 activity toward the affected hemisphere. In addition, significant correlation was found between decreased fMRI β-values and increased MEP amplitude post-MT, in the affected hemisphere. Our study suggests that a single MT intervention in stroke survivors is related to increased MEP of the affected limb, and a more constrained activity of the affected M1, as if activity had become more constrained and limited to the affected hemisphere.

Cumulative mtDNA damage and mutations contribute to the progressive loss of RGCs in a rat model of glaucoma.

PubMed

Wu, Ji-Hong; Zhang, Sheng-Hai; Nickerson, John M; Gao, Feng-Juan; Sun, Zhongmou; Chen, Xin-Ya; Zhang, Shu-Jie; Gao, Feng; Chen, Jun-Yi; Luo, Yi; Wang, Yan; Sun, Xing-Huai

2015-02-01

Glaucoma is a chronic neurodegenerative disease characterized by the progressive loss of retinal ganglion cells (RGCs). Mitochondrial DNA (mtDNA) alterations have been documented as a key component of many neurodegenerative disorders. However, whether mtDNA alterations contribute to the progressive loss of RGCs and the mechanism whereby this phenomenon could occur are poorly understood. We investigated mtDNA alterations in RGCs using a rat model of chronic intraocular hypertension and explored the mechanisms underlying progressive RGC loss. We demonstrate that the mtDNA damage and mutations triggered by intraocular pressure (IOP) elevation are initiating, crucial events in a cascade leading to progressive RGC loss. Damage to and mutation of mtDNA, mitochondrial dysfunction, reduced levels of mtDNA repair/replication enzymes, and elevated reactive oxygen species form a positive feedback loop that produces irreversible mtDNA damage and mutation and contributes to progressive RGC loss, which occurs even after a return to normal IOP. Furthermore, we demonstrate that mtDNA damage and mutations increase the vulnerability of RGCs to elevated IOP and glutamate levels, which are among the most common glaucoma insults. This study suggests that therapeutic approaches that target mtDNA maintenance and repair and that promote energy production may prevent the progressive death of RGCs. Copyright © 2014 Elsevier Inc. All rights reserved.

Determination of dietary cadmium-induced metallothioneins in rabbit kidneys and cadmium in metallothioneins by anion-exchange high-performance liquid chromatography coupled with graphite furnace atomic absorption spectrometry.

PubMed

Peng, S; Shan, X Q; Zheng, Y; Jin, L Z; Xu, W B

1991-12-06

A rapid method is described for the determination of dietary cadmium-induced metallothioneins (MTs) in rabbit kidneys by anion-exchange high-performance liquid chromatography. Rabbit kidney MT-I and MT-II were eluted at ca. 15.0 and 18.8 min, respectively, from a DEAE-5PW anion-exchange column with a Tris-HCl buffer (0.01-0.25 M, pH 8.6) and detected by ultraviolet absorbance at 254 nm. A standard calibration curve was constructed using purified standard MT isoforms, which demonstrated an excellent linear correlation between UV absorbance peak heights and the amounts of MT isoforms. Feeding a dose of cadmium for some days resulted in an increase in MT concentrations in rabbit kidneys, but not in the livers. The cadmium concentrations in MT-I and MT-II elutions were determined by graphite furnace atomic absorption spectrometry. MT-I and MT-II showed some differences associated with the oral intake of cadmium. Dietary cadmium also caused zinc to accumulate in kidneys to some extent. The effects of dietary oleic acid on the synthesis of MTs were also studied. Based on the method of standard additions, the recovery of MTs exceeded 93% and replicated injection of samples yielded a relative standard deviation of 2.4% at an MT level of 280 micrograms/g.

[Temporal and spatial distribution of anthropogenic ammonia emissions in China: 1994-2006].

PubMed

Dong, Wen-xuan; Xing, Jia; Wang, Shu-xiao

2010-07-01

Ammonia has both direct and indirect impacts on important environmental issues including acid deposition, regional fine particles and eutrophication. Estimation of anthropogenic ammonia emissions will provide valuable information for the pollution control of acid deposition and regional fine particle. Based on the provincial activity data on N-fertilizer application, livestock farming, N-fertilizer production and populations, this paper uses emission factor method to estimate China's atmospheric ammonia emissions, analyzes its historical trends and presents its geographical distributions from year 1994 to 2006. The national total atmospheric ammonia emissions are estimated to be 11.06 million tons (Mt) in 1994, which increase quickly to 16.07 Mt in 2006. Emissions from livestock farming, N-fertilizer application, N-fertilizer production and human excreta have increased from 4.47 Mt, 5.94 Mt, 0.09 Mt, and 0.59 Mt in 1994 to 6.61 Mt, 8.68 Mt, 0.14 Mt, 0.65 Mt respectively in 2006. Livestock farming and N-fertilizer application are the most important ammonia emission sources, which contributed 40.79 and 55.53 percent of total emissions respectively in 2006. In 2006, the average ammonia emission intensity is 1.67 t x km(-2) but there are large variations among atmospheric ammonia emissions from each province. Emissions from provinces including Henan, Shandong, Hebei, Sichuan and Jiangsu accounted for 40.82 percent of national emissions.

Neuroprotective effects of metallothionein against rotenone-induced myenteric neurodegeneration in parkinsonian mice.

PubMed

Murakami, Shinki; Miyazaki, Ikuko; Sogawa, Norio; Miyoshi, Ko; Asanuma, Masato

2014-10-01

Parkinson's disease (PD) is a neurodegenerative disease with motor symptoms as well as non-motor symptoms that precede the onset of motor symptoms. Mitochondrial complex I inhibitor, rotenone, has been widely used to reproduce PD pathology in the central nervous system (CNS) and enteric nervous system (ENS). We reported previously that metallothioneins (MTs) released from astrocytes can protect dopaminergic neurons against oxidative stress. The present study examined the changes in MT expression by chronic systemic rotenone administration in the striatum and colonic myenteric plexus of C57BL mice. In addition, we investigated the effects of MT depletion on rotenone-induced neurodegeneration in CNS and ENS using MT-1 and MT-2 knockout (MT KO) mice, or using primary cultured neurons from MT KO mice. In normal C57BL mice, subcutaneous administration of rotenone for 6 weeks caused neurodegeneration, increased MT expression with astrocytes activation in the striatum and myenteric plexus. MT KO mice showed more severe myenteric neuronal damage by rotenone administration after 4 weeks than wild-type mice, accompanied by reduced astroglial activation. In primary cultured mesencephalic neurons from MT KO mice, rotenone exposure induced neurotoxicity in dopaminergic neurons, which was complemented by addition of recombinant protein. The present results suggest that MT seems to provide protection against neurodegeneration in ENS of rotenone-induced PD model mice.

Expanding the functional human mitochondrial DNA database by the establishment of primate xenomitochondrial cybrids

PubMed Central

Kenyon, Lesley; Moraes, Carlos T.

1997-01-01

The nuclear and mitochondrial genomes coevolve to optimize approximately 100 different interactions necessary for an efficient ATP-generating system. This coevolution led to a species-specific compatibility between these genomes. We introduced mitochondrial DNA (mtDNA) from different primates into mtDNA-less human cells and selected for growth of cells with a functional oxidative phosphorylation system. mtDNA from common chimpanzee, pigmy chimpanzee, and gorilla were able to restore oxidative phosphorylation in the context of a human nuclear background, whereas mtDNA from orangutan, and species representative of Old-World monkeys, New-World monkeys, and lemurs were not. Oxygen consumption, a sensitive index of respiratory function, showed that mtDNA from chimpanzee, pigmy chimpanzee, and gorilla replaced the human mtDNA and restored respiration to essentially normal levels. Mitochondrial protein synthesis was also unaltered in successful “xenomitochondrial cybrids.” The abrupt failure of mtDNA from primate species that diverged from humans as recently as 8–18 million years ago to functionally replace human mtDNA suggests the presence of one or a few mutations affecting critical nuclear–mitochondrial genome interactions between these species. These cellular systems provide a demonstration of intergenus mtDNA transfer, expand more than 20-fold the number of mtDNA polymorphisms that can be analyzed in a human nuclear background, and provide a novel model for the study of nuclear–mitochondrial interactions. PMID:9256447

Russia’s National Interests in the Transcaucasus and the U.S. Policy: Implications for Armenian National Security

DTIC Science & Technology

2006-03-01

Transition, 156. 106 Quoted in Jacob W. Kipp, “War Scare in the Caucasus: Redefining the Threat and the War on Terrorism,” in Russian Military Reform , ed...Garden, 232. 109 Marcel de Haas, “The Development of Russia’s Security Policy,” in Russian Military Reform , ed. Anne C. Aldis and Roger N. McDermott...2003). de Haas, Marcel. “The Development of Russia’s Security Policy,” in Russian Military Reform , ed. Anne C. Aldis and Roger N. McDermott, 3-21

Recognition of strong earthquake-prone areas with a single learning class

NASA Astrophysics Data System (ADS)

Gvishiani, A. D.; Agayan, S. M.; Dzeboev, B. A.; Belov, I. O.

2017-05-01

This article presents a new Barrier recognition algorithm with learning, designed for recognition of earthquake-prone areas. In comparison to the Crust (Kora) algorithm, used by the classical EPA approach, the Barrier algorithm proceeds with learning just on one "pure" high-seismic class. The new algorithm operates in the space of absolute values of the geological-geophysical parameters of the objects. The algorithm is used for recognition of earthquake-prone areas with M ≥ 6.0 in the Caucasus region. Comparative analysis of the Crust and Barrier algorithms justifies their productive coherence.

Climate and Man (Selected Articles),

DTIC Science & Technology

1985-08-09

6). Large Caucasus. (7). True altitude, m. a - Alibek; b - Sheki; c - Zakataly; d - Yevlakh; e - Kirovabad; f - Zurnabad; g -Shusha; h - Kedabek...b 10 8 a Ff. M., C m np Ro s a E. 11., q aa 1 4 . r7. 0nmTr pexpea- umwuoueILHKII TeppHT~pHHf MOCKoRCKolk oOAaCTH Ro *pH3HoAoro- KAH marH te - CKNM...MACHINE TRANSLATION FTD-ID(RS)T-1542-84 9 August 1985 MICROFICHE NR: FTD-85- C -Ooo647 CLIMATE AND MAN (Selected Articles) English pages: 171 Source: Klimat

Technological applications of organo-montmorillonites in the removal of pyrimethanil from water: adsorption/desorption and flocculation studies.

PubMed

Flores, Federico M; Undabeytia, Tomas; Morillo, Esmeralda; Torres Sánchez, Rosa M

2017-06-01

Pyrimethanil (2-aniline-4, 6-dimethylpyrimidine, PRM) is used in fruit packing plants to control fungal infections and diseases. The effluents greatly polluted with this fungicide, as a point source contamination, need to be technologically treated for their regeneration before they reach water bodies. This work evaluates the use of organo-montmorillonites, synthetized in our laboratory, for their application in adsorption and coagulation/flocculation processes for the removal of PRM from water. The adsorption-desorption performance of PRM in a raw montmorillonite (Mt) and several organo-montmorillonites (organo-Mt) obtained by different amounts and types of exchanged surfactants (octadecyltrimethylammonium (ODTMA) and didodecyldimethylammonium (DDAB) bromides and benzyltrimethylammonium chloride (BTMA)) was studied. The PRM adsorption on raw Mt was assigned mainly to an interlayer occupancy, while hydrophobic interactions between PRM and the surfactants in the exchanged samples increased PRM adsorption, which was correlated with the surfactant loading. PRM desorption showed irreversible behavior in raw Mt, which changed to reversible for organo-Mt samples, and was also correlated with the increase of surfactant loading.Two of the organo-Mt with high surfactant loading (twice the CEC) were assayed for the removal of commercial PRM in coagulation/flocculation tests, and their performance was compared to that of the native clay (Mt). The use of the organo-Mt produced flocculation at a very low ratio (0.5 g L -1 ), whereas no flocculation was observed with Mt. These results proved the feasibility of the use of organo-Mt for the treatment of wastewater contaminated with PRM using a low organo-Mt/liquid ratio.

MODFLOW-2000, the U.S. Geological Survey modular ground-water model : user guide to the LMT6 package, the linkage with MT3DMS for multi-species mass transport modeling

USGS Publications Warehouse

Zheng, Chunmiao; Hill, Mary Catherine; Hsieh, Paul A.

2001-01-01

MODFLOW-2000, the newest version of MODFLOW, is a computer program that numerically solves the three-dimensional ground-water flow equation for a porous medium using a finite-difference method. MT3DMS, the successor to MT3D, is a computer program for modeling multi-species solute transport in three-dimensional ground-water systems using multiple solution techniques, including the finite-difference method, the method of characteristics (MOC), and the total-variation-diminishing (TVD) method. This report documents a new version of the Link-MT3DMS Package, which enables MODFLOW-2000 to produce the information needed by MT3DMS, and also discusses new visualization software for MT3DMS. Unlike the Link-MT3D Packages that coordinated previous versions of MODFLOW and MT3D, the new Link-MT3DMS Package requires an input file that, among other things, provides enhanced support for additional MODFLOW sink/source packages and allows list-directed (free) format for the flow model produced flow-transport link file. The report contains four parts: (a) documentation of the Link-MT3DMS Package Version 6 for MODFLOW-2000; (b) discussion of several issues related to simulation setup and input data preparation for running MT3DMS with MODFLOW-2000; (c) description of two test example problems, with comparison to results obtained using another MODFLOW-based transport program; and (d) overview of post-simulation visualization and animation using the U.S. Geological Survey?s Model Viewer.